LOCUS       DATIKR010000001         1976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_193645, whole genome shotgun sequence.
ACCESSION   DATIKR010000001 DATIKR010000000
VERSION     DATIKR010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193645"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..697
                     /locus_tag="VLL76_00005"
     CDS             65..697
                     /locus_tag="VLL76_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HSV27894.1"
                     /translation="MVETAFYAFVAFLVILDPPGTAAIFAAMTRNVADHHRRVMAWRA
                     TIMAGMLLFVFALAGEWLLGALGITLHAFRIAGGMLLFLLATDMVFARQSGLRSTTPM
                     EDAEAAAREDITVFPLAFPLIAGPGAMTSVVLMMGRAQGDPLTMLAVLAVLAVVLAIL
                     LVLLLAAGHVLRVLGVTGAHVISRVLGIVLAALAAQFVLDGVTQAFPGLL"
     gene            complement(700..963)
                     /locus_tag="VLL76_00010"
     CDS             complement(700..963)
                     /locus_tag="VLL76_00010"
                     /inference="COORDINATES: protein motif:HMM:NF018993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase inhibitor subunit zeta"
                     /protein_id="HSV27895.1"
                     /translation="MDDRVTHRRNRMAGLWAAELLGLIGKAAHDYAHDVAHAHEHHGD
                     DEHVIRRLAHDLRGKVTVHEIREKLAHLVQEAKKQLKHEGKGE"
     gene            1140..>1976
                     /locus_tag="VLL76_00015"
     CDS             1140..>1976
                     /locus_tag="VLL76_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV27896.1"
                     /translation="MTKLDHIRNFAIIAHIDHGKSTLADRLIQSCGAIEAREMKEQML
                     DSMDIERERGITIKAQTVRLSYQAKDGKTYQLNLMDTPGHVDFAYEVSRSLAACEGSI
                     LVVDASQGVEAQTLANVYQALDAGHEIVPVLNKIDLPAAEPERVKQQIEDVIGLDASD
                     AVMISAKSGIGIDDVLEALVTRLPSPEGDDKAELQALLVDSWYDAYLGVIILVRVKNG
                     VLKKGMKIRMMASGAAYEVDSVGYFTPKMVKSAELRPGEMGFITAGIKAVADTNVGDT
                     ITD"
BASE COUNT          289 a          684 c          652 g          351 t
ORIGIN      
        1 ggcgggcgca ccgggcgttc ctgagctata atgaggggta gccttcgaca cggggcgaac
       61 gaccatggtc gagaccgcct tctatgcctt cgtcgccttc ctggtgatcc tggacccgcc
      121 gggcacggcg gccatcttcg ccgccatgac gcgcaacgtc gccgaccatc accgccgcgt
      181 gatggcgtgg cgcgccacca tcatggccgg catgctgctg ttcgtgttcg ccctggccgg
      241 cgaatggctg ctgggcgccc tgggcatcac gctgcacgcc ttccgcatcg ccggcggcat
      301 gctgctgttc ctgctggcga ccgacatggt gttcgcccgc cagtccggcc tgcgctcgac
      361 cacccccatg gaggacgccg aggcggcggc gcgcgaggac atcaccgtct tccccctcgc
      421 cttcccgctg atcgccggcc ccggcgccat gacctcggtg gtgctgatga tgggccgcgc
      481 ccagggcgac ccgctgacca tgctggcggt cctggcggtt ctggccgtcg tgctggccat
      541 cctgctggtg ctgctgctgg cggccggcca cgtgctgcgg gtgctgggcg tcaccggcgc
      601 ccacgtcatc agccgcgtgc tcggcatcgt gctggccgcc ctggccgccc agttcgtgtt
      661 ggacggggtg acccaggcgt ttccgggcct gttgtagcct tattcgccct tgccctcgtg
      721 cttgagttgc ttcttcgctt cctgcaccag gtgggcgagc ttttcgcgga tctcgtggac
      781 ggtgaccttg ccgcgcaaat cgtgggcgag gcggcggatg acgtgttcgt cgtcgccgtg
      841 gtgttcgtgg gcgtgggcga cgtcgtgggc gtagtcgtgg gccgccttgc cgatcaggcc
      901 cagcagctcc gccgcccaca gaccggccat gcggttgcgg cgatgcgtga cgcggtcgtc
      961 catggcgcgc tccatccttc cccttctcgc cttgattcta cccccgcttg ggccggcgcg
     1021 gaagcgctgt cgtcgcgccc ttcccaacgg agggagcggg cgatgggacg ccgggcttcc
     1081 caaactccct cgaacgccct atgttccgtc gggtttccgg aaacgcagca ccttgtgaaa
     1141 tgaccaagct cgaccacatc cgcaatttcg cgatcatcgc ccatatcgac cacggcaagt
     1201 ccaccctggc cgatcgtctc attcagtcct gcggcgccat cgaggcgcgc gagatgaagg
     1261 agcagatgct cgattccatg gacatcgagc gcgagcgcgg catcaccatc aaggcgcaga
     1321 ccgtgcgcct gagctaccag gccaaggacg gcaagaccta tcagctgaac ctgatggaca
     1381 cgcccggcca cgtggacttc gcctacgagg tcagccggtc gctggcggcg tgcgagggct
     1441 cgatcctggt ggtcgacgcg tcccaaggcg tcgaggcgca gaccctggcc aacgtctacc
     1501 aggcgctgga cgccggccac gagatcgtgc ccgtgctcaa caagatcgac ctgccggcgg
     1561 ccgagcccga gcgcgtcaag cagcagatcg aggacgtcat cggcctcgac gcctcggacg
     1621 cggtgatgat ctcggccaag tccggcatcg gcatcgacga cgtgctggaa gccctggtca
     1681 cccgcctgcc ctcgcccgag ggcgacgaca aggccgagct gcaggccctg ctggtggatt
     1741 cctggtacga cgcctatctg ggcgtcatca tcctggtgcg ggtgaaaaac ggcgtgctca
     1801 agaagggcat gaagatccgc atgatggcct cgggcgccgc ctacgaggtg gattcggtcg
     1861 gctatttcac ccccaagatg gtcaagtccg ccgagctgcg gccgggcgag atgggcttca
     1921 tcaccgccgg catcaaggcg gtggccgaca ccaatgtcgg cgacaccatc accgac
//
LOCUS       DATIKR010000002         2323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_24274, whole genome shotgun sequence.
ACCESSION   DATIKR010000002 DATIKR010000000
VERSION     DATIKR010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24274"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VLL76_00020"
     CDS             <1..448
                     /locus_tag="VLL76_00020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27897.1"
                     /translation="AGGAMMDRWLVVFSDLEPLPADAPRSARALHWALAGLLKPGFRH
                     VFAARPLPGGYLVANPHSVGLDLLAMAGDQPIADGSPFTADDWWHGLQISIAAGRVAA
                     VWAVANRPGPLRPRLLTCVSTVKHLLGCDGWAVTPFQLYRQLTKET"
     gene            450..644
                     /locus_tag="VLL76_00025"
     CDS             450..644
                     /locus_tag="VLL76_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27898.1"
                     /translation="MGGFFGGAPPAPDNSALEDARRERDELRKKNDAKMANIRGRQDG
                     RSALLAFNPEDKTLSDKLGG"
     gene            648..2279
                     /locus_tag="VLL76_00030"
     CDS             648..2279
                     /locus_tag="VLL76_00030"
                     /inference="COORDINATES: protein motif:HMM:NF023657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HSV27899.1"
                     /translation="MAESYKDPVLRRYARARTRRQAFDSMLRDCYDYALPQIDPTGNR
                     PEGAKVDAHLYDSTAPFALWKKTQRIHGQLFPPGEPFVDFDFGGFRLRDLDEDQRQQA
                     EAVLADAAEAVSAAIDDSNFHIEINPALAEVQISTGAILFNEGTVDEPFVFEHIPISE
                     LVPEQGPKGWIDTVFWPRKVALRDIEELLPDAQLDEATRKQIDKDPDTEIDILFAQVK
                     NPKPANPDKPFDFFVYLVDGEKRIVERSYATKPIIVFRLWRVGREVLGRGPVTLVRAN
                     ILTANKTVELVLKNATIAVTGIWQADDDGVINPANIKLTPGMIIPKAVGSSGLQPLQS
                     PGRFDVSQLVLADLRASIKEAIEGPPLPPLEGDRRTATEFWTRERELAEVEVPAHLRL
                     FYEFDRPFAERAIDILSSDKYRGTRYHVPLYDLGTSRLRPRPASPLAKIREYAALTRT
                     HQALLAAGAISPEITAKIVKLERYLRRFLLAHGIELDDLVNKDDLAKAQAEAAVQQQA
                     HAAGMQQGVQVGERIGAGDLTGALQVVQQTMGAAQ"
BASE COUNT          413 a          831 c          738 g          341 t
ORIGIN      
        1 cgctgggggg gcaatgatgg accgctggct ggtcgtcttc tccgacctcg aacccctgcc
       61 cgccgacgcc ccccgttccg cccgtgccct gcattgggcg ctagccgggt tgctgaagcc
      121 cgggttccgc catgtgttcg cggcgcgtcc cctgcccggc ggctacctgg tggccaatcc
      181 ccattccgtc ggcctggatc tgctggccat ggccggcgat cagcccattg ccgacggctc
      241 gcccttcacc gccgacgact ggtggcacgg cctgcagatc agcatcgcgg ccggccgcgt
      301 cgccgccgtg tgggccgttg ccaatcggcc ggggccgctg cgccctcgcc tgctgacctg
      361 cgtgtccacc gtcaaacatc tgctggggtg cgacggttgg gccgtcaccc cattccagct
      421 ttaccgccaa ctgaccaagg agacctgaca tgggtggatt ttttgggggc gccccgccgg
      481 cgccggacaa ttcggccctc gaggatgcgc ggcgcgaacg cgacgaactg cgcaagaaga
      541 acgacgccaa gatggcgaac atccgcggcc gccaggatgg ccggtccgcg ctgctggcct
      601 tcaaccccga ggacaagacg ctgtcagaca agctgggggg ctagcagatg gccgaatcct
      661 acaaggatcc ggtgctgcga cgatacgcca gggccaggac ccggcgccag gcgttcgatt
      721 ccatgctgcg ggattgctac gactacgccc tgccgcaaat cgaccccacc ggcaaccggc
      781 ccgagggggc aaaggtcgac gcccacctgt acgacagcac cgcccccttc gccctgtgga
      841 agaagacgca gcgcatccac ggccaattgt tcccgccggg cgagcccttc gtcgattttg
      901 atttcggcgg attccggctg cgggatctgg acgaagacca gcgccagcag gccgaggcgg
      961 ttctggccga tgcggccgag gccgtcagtg ccgccatcga cgacagcaac ttccacatcg
     1021 aaatcaaccc ggccctggcc gaggtgcaga tttcaaccgg cgccatcctg ttcaacgaag
     1081 gcacggtcga cgaacccttc gtgttcgaac acatccccat ctcggaactg gtaccggagc
     1141 agggccccaa gggctggatc gacacggtgt tctggccgcg caaggtggcg ctgcgcgaca
     1201 tcgaggagct gttgcccgac gcccagctgg acgaagcgac ccgcaagcag atcgacaagg
     1261 accccgacac agaaatcgac atcctgttcg cccaggtcaa gaacccgaag cccgccaatc
     1321 ccgacaagcc gttcgacttc ttcgtctacc tggtcgacgg ggaaaagcgc atcgtcgagc
     1381 gcagctacgc caccaagccc atcatcgtgt tccgcctgtg gcgggtcggg cgcgaggtgc
     1441 tggggcgcgg gccggtgacg ctggtgcggg ccaacatcct gacagccaac aagacggtcg
     1501 aactggtgct gaagaacgcc accatcgcgg tgaccggcat ctggcaggcc gacgacgacg
     1561 gcgtgatcaa cccggccaac atcaagctga ccccgggcat gatcatcccc aaggccgtgg
     1621 gttcgtctgg cctgcagcca ctgcaaagcc ccggccgctt cgacgtctcg caattggtgc
     1681 tggcggatct gcgcgcctcg atcaaggaag cgatcgaggg gccgcccctg cctccgctgg
     1741 aaggcgaccg ccgcaccgcc accgaattct ggacccgcga gcgcgaactg gccgaagtcg
     1801 aggtgccggc gcatctgcgc ctgttctacg aattcgaccg gcccttcgcg gagcgtgcca
     1861 tcgacatcct gtccagcgac aagtaccgcg gcacccgcta tcacgtgccg ctctacgacc
     1921 tgggcaccag ccgcctgcgg ccgcggcccg ccagtccgct ggccaagatc cgcgaatacg
     1981 ccgcgctgac ccgcacccac caggccctgc tggcggccgg cgccatctcg ccggaaatca
     2041 ccgccaagat cgtcaagctg gagcgctatc tgcgccgctt cctgctggcc cacggcatcg
     2101 agctggacga cctggtcaac aaggacgacc tggccaaggc ccaggccgag gcggcggtac
     2161 agcaacaggc gcacgccgcc ggcatgcagc agggtgtcca ggtgggcgag cgaatcggcg
     2221 ccggcgacct gaccggcgcc ctgcaggtgg tgcagcaaac catgggggcg gcgcaatgag
     2281 ccaattccca tgggccgaca tcgacgactc ggccgccgcc ccg
//
LOCUS       DATIKR010000003         3261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_169483, whole genome shotgun sequence.
ACCESSION   DATIKR010000003 DATIKR010000000
VERSION     DATIKR010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169483"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(281..448)
                     /gene="rpmG"
                     /locus_tag="VLL76_00035"
     CDS             complement(281..448)
                     /gene="rpmG"
                     /locus_tag="VLL76_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HSV27900.1"
                     /translation="MAKPATILIKLLSSAGTGYFYVAKKNPRKTTEKLKFRKYDPVVR
                     KHVEFNEAKIK"
     gene            complement(537..2138)
                     /locus_tag="VLL76_00040"
     CDS             complement(537..2138)
                     /locus_tag="VLL76_00040"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSV27901.1"
                     /translation="MKRNAVARWVIAASLFVAGSCAPVSQGLLAGPHAPYDTAEAEKT
                     FLFGYNSIVERHLDRVTAATIAIEGMRGLAAIDPEIGISRMEGKLLLTASDRIVAEYP
                     EPLADDVRAWARMTVTVALEARGVSAKVKDADLEKVYESVFDATLAKLDMFSRYSGAK
                     EAREHRASRNGFGGVGIKFDLVDGEAKISEIIEESPAVRAGLAVGDVITHIDGQSVSG
                     LAKDELSTRLRGPVNSDVQVTLRRGFKPMDVTVHRDLIVPPTVTMTLNNGVAEFKITG
                     FNQRTASSLATELKHARDKLGPALTGVVLDMRGNPGGLLDQAVTMSDLFIKDGPIVST
                     RGRHPLASQAYEAREGDMGEDLPVVVLVDGKSASAAEILTAALQDAGRAVVIGTNSYG
                     KGTVQTVLRLPNDGEMTLTWSRFHTPSGYALHGLGVLPTICTADDKADPGDLAQGIVH
                     AVAPAPVTANLSLWRHAKLEETDLRKQLRATCPSAKHGDAKLDMELAQRILATQGLYE
                     RALSMSAPAPAPSSAHVVPAVHTVN"
     gene            2469..2918
                     /locus_tag="VLL76_00045"
     CDS             2469..2918
                     /locus_tag="VLL76_00045"
                     /inference="COORDINATES: protein motif:HMM:NF016807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HSV27902.1"
                     /translation="MLQVIYVSEVTQPVPEHQLHRMLEKSRANNRARNISGLLVRDGG
                     AFLQVLEGPSREIEGLMDRIGCDGRHSDLRVLQVAPIAARQFDGSALAFVDTSRRISL
                     PDPYLRLRPALRERTLGRAQARAVLELFGPGSAVVLDNAGHARQPAT"
     gene            complement(2868..3203)
                     /locus_tag="VLL76_00050"
     CDS             complement(2868..3203)
                     /locus_tag="VLL76_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27903.1"
                     /translation="MPYVLRDDNGQVVALSEVPLEEDAEELDSDDSEVLAFLTRATDS
                     AMTIQGDRFLASDLAFIRVIEDVIEALIRKGVLTLADLPPAAQDKLMERRALRGWLAG
                     VAGIVEDDG"
BASE COUNT          545 a         1048 c         1112 g          556 t
ORIGIN      
        1 aggcggaagc ccgccacgac aaccaaatcg ccgtactgcc cttcacggcc cccgcccccg
       61 cccgcgccat cgacctggcc tggcgccgga cgacctcgcg caccgacgaa ttccgcctgt
      121 tcgcccggct gatcgaggag aacctgccgg acgtggtgga gaaggtcggg tagaaattat
      181 aaccaccaag gacaccccgc gcacatgacc gcgcgcccca aaaagcaaaa cgcccgccga
      241 aaggcgggcg tttcacgttc ggtgcttgtc cgaaggaggc ttacttgatc ttggcctcgt
      301 tgaactcgac gtgcttgcgc acgacgggat cgtacttgcg gaacttaagc ttctcggtgg
      361 tcttacgcgg gttcttcttc gccacgtaga aatagccagt gccggcggag ctgaggagct
      421 tgatgaggat agtggcgggc ttggccatgg cgaaaatccc aaaatcagtt gtgttctgta
      481 cgaaactcag ggggcggaag atactgatct gcctgccaga gtcaaggggt ttcggttcaa
      541 ttgacggtat ggaccgccgg aaccacgtgg gcggaggacg gggccggggc cggggccgac
      601 atggacagcg cccgctcgta caggccctgg gtggccagga tgcgctgcgc cagctccatg
      661 tccagcttgg cgtcgccatg cttggccgac gggcaggtgg cgcgcaattg cttcctgagg
      721 tcggtttcct cgagcttggc atggcgccac aggctgaggt tggcggtgac cggcgccggc
      781 gccacggcat ggacgatgcc ctgggccagg tcgcccggat cggccttgtc gtcggcggtg
      841 cagatggtcg gcagcacgcc cagaccgtgc agggcatagc ccgacggggt gtggaagcgc
      901 gaccaggtca gcgtcatttc gccgtcgttg ggcagccgca gcacggtctg caccgtgccc
      961 ttgccgtagg agttggtgcc gatgaccacg gcgcggccgg catcctgcag cgcggcggtc
     1021 aggatctcgg cggccgaggc cgacttgccg tccaccagca ccaccaccgg cagatcctcg
     1081 cccatgtcgc cctcgcgcgc ctcataggcc tggctggcca gcggatgacg gccacgggtc
     1141 gaaacgatgg ggccgtcctt gatgaacagg tccgacatgg tgacggcctg gtccagcaag
     1201 ccgccgggat tgccgcgcat gtccaggacc accccggtca gcgccggccc cagcttgtcg
     1261 cgggcgtgct tcaactcggt ggccaggctc gaggcggtgc gctggttgaa gccggtgatc
     1321 ttgaactcgg cgacgccgtt gttgagcgtc atggtcacgg tcggcggcac gatcaggtcg
     1381 cggtggacgg tgacgtccat gggcttgaag ccgcgccgca gggtgacttg gacgtcgctg
     1441 ttgaccgggc cgcgcaggcg ggtcgacagc tcgtccttgg ccaggccgga aaccgattgg
     1501 ccgtcgatat gagtgatgac gtcgccgacc gccaggccgg cgcgcacggc cgggctttcc
     1561 tcgatgatct cgctgatctt ggcttcgccg tcaacgaggt cgaacttgat gccgacgccg
     1621 ccgaagccgt tgcggctggc gcggtgctcg cgcgcctcct tggcgccgga atagcgcgag
     1681 aacatgtcga gcttggccag cgtggcgtcg aacaccgatt cgtagacctt ttccaggtcg
     1741 gcatccttga ccttggccga cacgccgcgc gcttccagcg ccacggtgac ggtcatgcgg
     1801 gcccaggccc gcacgtcgtc ggccagcggc tcggggtatt ccgccacgat gcggtcggac
     1861 gcggtcagca gcagcttgcc ttccatgcgc gaaatgccga tctcggggtc gatggcggcc
     1921 aggccgcgca tgccctcgat ggcgatggtc gcggcggtga cgcggtcgag gtggcgctcg
     1981 acgatggaat tgtagccgaa caggaaggtc ttctcggcct cggcggtgtc atagggcgca
     2041 tgggggccgg ccagcagacc ctggctgacc ggagcgcacg accctgccac aaagagcgag
     2101 gcggcgatga cccaacgtgc tacggcattt cgcttcaaaa cgtcaccccg aggtatgtcc
     2161 taagcagtac gtgagtgatc ttgcctgacc cacggcgcct ggcaccagtc ttttcactta
     2221 cctctttggg ggtggaaagt aaatggcaag tcggctcgat ggccgtacac gcgccagttt
     2281 agcaaagcgc gcgcggacga gggggcgggg cgacgcatat ggagaagtaa acacactatt
     2341 aatgctttat ccgggatcgg cgcggccgca cccccatcgg acaggccgtt tctccacact
     2401 tgatcaataa ttggcgccta tcatctgctt ggggaaaggg cctgaaccgc cgcgacgggg
     2461 gacgatccat gctgcaggtg atctacgtca gcgaagtgac ccaaccggtt cccgaacacc
     2521 agcttcaccg catgctggag aagtcccgcg ccaacaaccg cgcccgcaac atatcgggcc
     2581 tgctggtgcg cgacggcggc gccttcctgc aggtgctgga aggccccagc cgcgagatcg
     2641 agggcttgat ggatcgtatc ggctgcgacg gccggcattc ggatttgcgg gtgctgcagg
     2701 tcgcgcccat cgccgcccgc caattcgacg gctcggccct ggccttcgtg gacacgtcgc
     2761 gccgcatcag cctgcccgat ccgtacctgc ggctgcgccc ggcattgcgc gaacgaacgc
     2821 tgggccgggc gcaggcccgc gcggtgctgg agctgttcgg ccccggatca gccgtcgtcc
     2881 tcgacaatgc cggccacgcc cgccagccag ccacgtaggg cgcggcgctc catcagcttg
     2941 tcctgggcgg ccggcggcag atcggccagg gtcagcaccc ccttgcggat caacgcctcg
     3001 atcacgtctt cgatgacccg gatgaacgcc aggtcggagg ccaggaagcg gtcgccctgg
     3061 atggtcatgg ccgaatctgt ggcgcgggtg aggaaggcca gcacctcgct gtcgtcggag
     3121 tccagctcct cggcatcttc ctcgagcggc acctcggaca gcgcgaccac ctggccgttg
     3181 tcgtcgcgca ggacataggg catgggagac tccgggaggg ttggcgattg ctttgtacct
     3241 gccgggaagg ccgaggtcca g
//
LOCUS       DATIKR010000004         1779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_12193, whole genome shotgun sequence.
ACCESSION   DATIKR010000004 DATIKR010000000
VERSION     DATIKR010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12193"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..1192
                     /locus_tag="VLL76_00055"
     CDS             224..1192
                     /locus_tag="VLL76_00055"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018874939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family oxidoreductase"
                     /protein_id="HSV27904.1"
                     /translation="MLDETEGKVKPSIRHLADADLPAGDVTIRIDYSTLNYKDGMILN
                     GLGRLVRQYPHIPGIDFAGTVEASDNPAWKPGDKVILTGWRVGEIHWGGYAQKARVKG
                     DWLVPLPAGMTTRQAMALGTAGLTAMLAVMALEEHGLSPDKGEVLVTGAAGGLGSVAV
                     TLLARRGYNVAASTGRASQHDYLKSLGAQVIVDRAELGGGAAKPLMAERWAGCVDSVG
                     GPTLGAVLATLKMHSPVASCGNAGGIELNTTVLPFLLRGINLLGIDSAQCPTPRRLAA
                     WDRLAKEMPFDLLDTMTTDCKLADLPEQAAKILKGEVRGRVVVDVN"
     gene            1201..>1779
                     /gene="msrP"
                     /locus_tag="VLL76_00060"
     CDS             1201..>1779
                     /gene="msrP"
                     /locus_tag="VLL76_00060"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HSV27905.1"
                     /translation="MLIRRAAAIRESEVTDHRLYLDRRRFLALGAASAVTAWVGRAEA
                     AEDKPTPFEAITTYNNFYEFGTDKEDPAKHAPGRLKTRPWSVAVEGACARPGVLAFDD
                     LIKPHKVEERIYRLRCVEGWSMVIPWMGVPLADVLKRFEPTSNAKFVEFTTLADPDQM
                     PGVKSRVLDWPYVEGLRMDEAMHPLTLLAVGLY"
BASE COUNT          294 a          606 c          601 g          278 t
ORIGIN      
        1 cccgtcggca ccccggacct ccaatccgcc cggcgccggc cgcaccacca ccttgcgctc
       61 ggcggtctgg tgggcgtcga tgaaacgggc gggaaaatcc ttggtcatgg gtgcgattag
      121 cgcagaagtc tcttccctcg tccagacccg gaccacatct gctatggtac ggcaaacgcc
      181 aaatgccaac ggaggatgga ccgtgaccga cttcaccgcg ctgatgctgg atgagaccga
      241 gggcaaggtg aaaccgtcga tccgccatct ggccgacgcc gatttgccgg ccggcgacgt
      301 caccatccgc atcgactatt cgaccttgaa ctacaaggac ggcatgattc tcaacggcct
      361 cggccggctg gtgcggcagt atccgcacat ccccggcatc gattttgccg gcaccgtcga
      421 agcctcggac aaccccgcct ggaagcccgg cgacaaggtc atcctgaccg gctggcgcgt
      481 gggcgaaatc cattggggcg gctatgccca gaaggcgcgg gtcaagggcg actggctggt
      541 gccgctgccc gccggcatga ccacccgcca ggccatggct ttgggcactg ccggcctgac
      601 cgccatgctg gcggtgatgg cgctcgagga acacggcctg tcgcccgaca agggcgaggt
      661 gctggtcacc ggcgccgccg gcggcctggg cagcgtcgcc gtcaccctgt tggcgcggcg
      721 cggctacaat gtggccgcca gcaccggccg cgccagccag cacgactatc tgaaaagcct
      781 gggcgcccag gtcatcgtcg accgtgccga actgggcggc ggcgccgcca agccgctgat
      841 ggcggaacgc tgggccggct gcgtcgacag cgtcggcggc cccaccctgg gcgccgtcct
      901 ggcgaccctg aagatgcatt cgccggtggc gtcgtgcggc aacgccggcg gcatcgagct
      961 gaacaccacc gtgctgccgt tcctgctgcg cggcatcaac cttttgggca tcgactcggc
     1021 gcaatgcccg accccgcgcc gtctggccgc gtgggaccgc ctggccaagg aaatgccgtt
     1081 cgacctgctg gataccatga ccaccgactg caagcttgcc gacctgcccg agcaggccgc
     1141 caagatcctc aagggcgagg tgcgcggccg ggtggtcgtc gatgtgaatt aggagccgcc
     1201 atgctgatcc gccgcgccgc cgccatccgt gaatccgagg tcaccgacca ccggctgtat
     1261 ctcgatcgtc ggcggttcct ggcgttgggg gcggcgagtg cggtgaccgc ctgggtcggg
     1321 cgggccgagg cggcggagga caagccgacg ccgttcgagg ccatcaccac ctacaacaat
     1381 ttctacgaat tcggcaccga caaggaggat ccggccaagc atgcgccggg ccgcttgaag
     1441 acccggccat ggagcgtggc ggtcgagggc gcctgcgcgc ggccgggcgt gctggccttc
     1501 gacgatttga tcaaaccgca caaggtcgag gaacgcatct accgcctgcg ctgcgtcgag
     1561 ggctggtcca tggtgatccc gtggatgggc gtgcccttgg ccgatgtgct gaagcggttc
     1621 gaaccgacct ccaacgccaa gttcgtggaa ttcaccaccc tggccgatcc cgatcagatg
     1681 cccggggtca agtcgcgcgt gctcgactgg ccctatgtgg agggcctgcg catggacgag
     1741 gccatgcatc cgctgacgct gctggcggtg gggctgtac
//
LOCUS       DATIKR010000005         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_60601, whole genome shotgun sequence.
ACCESSION   DATIKR010000005 DATIKR010000000
VERSION     DATIKR010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60601"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1358)
                     /locus_tag="VLL76_00065"
     CDS             complement(<1..1358)
                     /locus_tag="VLL76_00065"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HSV27906.1"
                     /translation="MKKIAVAVIALLVLVVGAALVMPALIDWSRYREDIATRIEKATG
                     RDVDIAGDVGLRLLPSPAFTAERITIGNIPEAGDQPFAAADSLSIRLRLLPLLTGKVA
                     VESLVLDRPAVHLLRLPDGRANWQFATRQDAPGGDTAPAQAAPEPQPAQDSGDFSVKQ
                     IRLRDGLVTYRDGKSAPVTVEAIDATIDAGGPAGPFLGKGDMVVRGTKVAFEAALDRL
                     AEQRGSPAHLTVTLPDTGARAEFSGILSHLPSGDSLRGRLVLSTPDSGRAIPGLPAAP
                     FNAEANLAANAKEVTLDDLVATLGDTRATGAATIGLGERTTADVKLNVASLDLDKLLE
                     KRAAAPQQQQQSAPAPAAPPGKAVEPPAGSFSLPKDVFVTADLGVEALAWKGQVVRQA
                     RLEATLDQGEVMIQGATAQLPGGTVVSLAGTLAAERGNPVFDGQAEARSDNLRAVLDW
                     LEV"
     gene            complement(1355..>1832)
                     /locus_tag="VLL76_00070"
     CDS             complement(1355..>1832)
                     /locus_tag="VLL76_00070"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV27907.1"
                     /translation="VTLVNIGLGVVTALVMWALGVPNPALWGVVAAILNYVPYAGAML
                     NVVILAVVGLLSFDELWRGMLPAAAFLGLTTLESDVLTPTMVGRRLTLPPMVVFLSLL
                     VWGWIWGVAGALLAVPILVILKVAADYSETLRPLAPFLGGNVAPKLRGTGFKGTRR"
BASE COUNT          279 a          627 c          670 g          256 t
ORIGIN      
        1 acctccagcc aatccagcac ggcgcgcaga ttgtccgagc gcgcctcggc ctggccgtcg
       61 aacaccggat tgccgcgctc tgccgccagc gtgccggcca gcgacaccac cgtgccgccg
      121 ggcaattgcg cggtggcgcc ttggatcatc acttcgccct ggtccagcgt ggcttccagt
      181 cgggcctggc gcaccacctg gcccttccac gccagcgcct cgacacccag atcggcggtg
      241 acgaacacgt ccttgggcag gctgaacgag ccggccgggg gttcgacggc cttgcccggc
      301 ggggccgcgg gggcaggggc ggattgctgc tgctgttgcg gtgccgccgc gcgcttttcc
      361 aacagcttgt cgaggtccag gctggcgaca ttcagcttga cgtcggcggt ggtgcgctcg
      421 cccaggccga tggtggcggc accggtggcg cgggtgtcgc ccagggtggc caccaggtcg
      481 tcgagcgtga cctccttggc gttggcggcc aaattggcct cggcgttgaa cggcgcggcg
      541 ggcaggccgg gaatggcgcg gccggaatcc ggggtggaca gcaccaaccg gccgcgcagc
      601 gaatccccgg acggcagatg gctcaggatg ccggagaatt cggcccgggc gccggtgtcg
      661 ggcagggtca cggtcagatg ggcgggcgag ccgcgctgct cggccaggcg gtccagcgcc
      721 gcctcgaacg ccaccttggt gccgcgcacc accatgtcgc ccttgcccag gaacggcccg
      781 gccgggccgc cggcatcgat ggtggcgtcg atggcttcca ccgtgacggg ggccgacttg
      841 ccgtcgcggt aggtgacgag gccatcgcgc aggcggatct gtttgacgct gaaatcgccg
      901 ctatcctgcg ccggttgcgg ttcgggtgcg gcctgggccg gggcggtgtc gccgccgggg
      961 gcgtcctggc gggtggcgaa ttgccaattg gcgcggccgt cgggcaggcg gagcaggtgc
     1021 acggcggggc ggtcgagcac cagcgactcg acggcaacct tgccggtcag cagcggcagc
     1081 aggcgcaggc ggatcgacag gctgtcggcg gcggcgaagg gctggtcgcc ggcctcgggg
     1141 atgttgccga tggtgatgcg ctcggcggtg aaggccgggc tgggcagcag gcgcaggccg
     1201 acgtcgccgg cgatgtcgac gtctcgccca gtggcctttt cgatgcgcgt cgcgatgtcc
     1261 tcgcgatagc ggctccagtc gatcagggcg ggcattacca gcgcggcgcc gaccaccagc
     1321 accagcaggg cgatgacggc taccgcgatc ttcttcatct gcgcgttccc ttgaaaccag
     1381 tgccccggag tttaggcgca acgttgccgc caagaaaggg ggccaaaggg cgcagggttt
     1441 cggaatagtc ggcggccacc ttcaggatca ccaggatcgg caccgccagc aatgccccgg
     1501 ccacgcccca gatccagccc cacaccagca gcgacaggaa caccaccatg ggcggcaggg
     1561 tcaggcggcg gccgaccatg gtcggcgtca gcacgtcgga ttccagcgtg gtcaggccca
     1621 ggaaggcggc ggccggcagc atgccgcgcc acaattcgtc gaaggacagc agcccgacca
     1681 ccgccaggat caccacattg agcatggccc cggcataggg cacgtaattg aggatggcgg
     1741 ccaccacccc ccacagggcg ggattgggca cccccagcgc ccacatcacc agcgccgtca
     1801 ccacgcccag gccgatgttg accagcgtca cc
//
LOCUS       DATIKR010000006         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_36431, whole genome shotgun sequence.
ACCESSION   DATIKR010000006 DATIKR010000000
VERSION     DATIKR010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36431"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="VLL76_00075"
     CDS             complement(<1..1201)
                     /locus_tag="VLL76_00075"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HSV27908.1"
                     /translation="MSDVLSIALAQINPVVGDVAGNVARIRAARTQAATDGAQLVVFP
                     ELTLSGYPPEDLVLKDAFLDAVEMAVEELARDTADEGPALLVGAPWRVDGKRHNAVLL
                     LDHGKVTATRLKHHLPNYGVFDEARVFVPGPAPGPIAFRGVRLGVMVCEDMWFSDVAE
                     TLAETGAEILVVPNGSPFELDKHDVRLNRAVARVVETGLPLLYVNQLGGQDELVFDGA
                     SFALDAKGKPLVRLNPWRVEVVTTTWRRTAEGWTTDGPLAPEPSRSESVYQAMMLGLR
                     DYVTKNGFPGVVLGLSGGIDSALAAAVAADALGPDKVWCVMMPSPYTSRESLEDAAAV
                     AEMLGCRLDSIGIQPAMGAFDGMLAPVFQGKDSDITEENLQSRARGITLMAISNKFGP
                     MVLSTGNK"
     gene            1300..>1832
                     /locus_tag="VLL76_00080"
     CDS             1300..>1832
                     /locus_tag="VLL76_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27909.1"
                     /translation="MTDDTKPAGPKACEAIAHTMIGHFTTRLEVEARKAGGALSAEAI
                     RDLADRFVAEEAQRFATTFRRSFDDCSQSREARRWDSARRRPFDRLLMKTFAHLFPPR
                     QGDDGGQGILSRRMIPGFNLAIDKMIGPTLYEQCQRKSQAILDRHRQSNGAYDWDRVH
                     ADAEARALVGDVLVALA"
BASE COUNT          296 a          652 c          614 g          270 t
ORIGIN      
        1 tcttgttgcc ggtggacagc accatggggc caaacttgtt gctgatcgcc atcaaggtga
       61 tgccgcgcgc ccgcgattgc aggttttctt cggtgatgtc ggaatccttg ccctggaaca
      121 ccggcgccag catgccgtcg aacgcgccca tggccggctg gatgccgatg ctgtcgaggc
      181 gacagcccag catctcggcc accgccgccg cgtcctccag actttcgcgg ctggtatagg
      241 gcgacggcat catcacgcac cacaccttgt cgggacccag cgcgtcggcc gccacggcgg
      301 cggccagcgc ggaatcgatg ccgcccgaca ggcccagcac aacgccgggg aaaccgttct
      361 tggtcacata atcgcgcagg cccagcatca tcgcctggta gacgctttcc gagcgcgacg
      421 gctcgggcgc cagcgggccg tcggtggtcc agccctcggc cgtgcggcgc caggtggtgg
      481 tgaccacctc gacccgccac gggttcaggc gcaccagcgg cttgcccttg gcatccagcg
      541 cgaaggacgc gccgtcgaac accagttcgt cctggccgcc caactggttg acgtaaagca
      601 gcggcaggcc ggtctcgacc acgcgggcga cggcgcggtt gaggcggacg tcgtgcttgt
      661 cgagttcgaa cggcgagccg ttgggcacca ccaggatttc ggcgccggtc tcggccaggg
      721 tttccgctac gtccgagaac cacatgtcct cgcacaccat gacgcccagg cgcacccccc
      781 ggaaggcgat gggtccgggc gccgggccgg gcacgaacac gcgggcctcg tcgaacacgc
      841 cgtaattggg caaatggtgc ttgagccggg tggccgtcac cttgccgtgg tccagcagca
      901 gcaccgcgtt gtgacgcttg ccgtccaccc gccacggcgc gccgaccagc agcgccgggc
      961 cttcgtcggc ggtgtcgcgc gccaattcct cgaccgccat ttccacggcg tcgaggaagg
     1021 cgtccttcag caccagatcc tcgggcggat agcccgacag ggtgagctcc gggaacacca
     1081 ccaactgggc gccatccgtg gccgcctgcg tccgcgccgc acggatgcgc gcgacattgc
     1141 cggcgacgtc gccgaccacg ggattgattt gcgcgagcgc gatggaaagg acgtcggaca
     1201 tgagggggcg cctgacgggg agagatagtc tgtcctacgg caccggggcg ggactgtcaa
     1261 tttgcgaacg gcctgctatc ctgccccggg gagggttgca tgaccgatga caccaagcct
     1321 gcggggccga aggcctgcga ggcgatcgcg cataccatga tcggccattt caccacgcgc
     1381 ctggaggtcg aggcgcgcaa ggccggcggc gcgctgtcgg ccgaggcaat ccgcgacctg
     1441 gccgaccgct tcgtggcgga ggaagcgcaa cgcttcgcca ccaccttccg ccgctcgttc
     1501 gacgattgca gccaaagccg cgaggcgcgg cggtgggaca gcgcccgccg ccgcccgttc
     1561 gaccgcctgc tgatgaagac cttcgcccac ctgttcccgc cgcgccaggg cgacgacggc
     1621 ggccagggca tcctgagccg gcgcatgatt cccggcttca acctggccat cgacaagatg
     1681 atcggcccga cgctgtacga gcaatgccag cgcaagtccc aggccatcct ggatcgccac
     1741 cgccagtcca acggcgccta tgactgggac cgcgtccacg ccgacgccga ggcccgcgcc
     1801 ctggtcggcg acgtgctggt ggccctggcc ca
//
LOCUS       DATIKR010000007         2022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_60629, whole genome shotgun sequence.
ACCESSION   DATIKR010000007 DATIKR010000000
VERSION     DATIKR010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60629"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /locus_tag="VLL76_00085"
     CDS             complement(<1..1171)
                     /locus_tag="VLL76_00085"
                     /inference="COORDINATES: protein motif:HMM:NF023855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme N-terminal
                     domain-containing protein"
                     /protein_id="HSV27910.1"
                     /translation="MEVVRIVRPQDGLREKEWLVANGLGGYACGTVAGNPTRRYHGPL
                     VASLPAPLGRMMMLNRLDEAAGGISLTTDETDPGALEEFRLEWGLPVWRYRVGGALVE
                     KRLVMPHQQNTTYVEYRLAEGDAPLALALKPWFQFRGHDRQVDEEVPGPATMRAAEGR
                     FEIQVNGVPPTRLRLTGDGAAFALDDGTDAHAYYVREEERGYASTGHLWSPGVLAATL
                     APGRPVTLVVSSEDWHVATAMTAAEAWEWETGRRRRLAQAAHPALREGIAAELVVTAD
                     SFIITPLSRIAEQVRARSQGEDIRAIIAGYHWFSVWGRDTMIALEGLALVTGRHQEAR
                     WILQTFLAHVKDGLIPNDFPDQATHGQYNTADATLWSFHALDRYVAATGDLDTLGR"
     gene            complement(1229..1450)
                     /locus_tag="VLL76_00090"
     CDS             complement(1229..1450)
                     /locus_tag="VLL76_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27911.1"
                     /translation="MRIRSAALGLAAVGAGLLVASLLRRKDDELGDVIDVEHSPPEPG
                     ELIGYPASRKSAADSAQVLGREGPTGRPM"
     gene            1566..1751
                     /locus_tag="VLL76_00095"
     CDS             1566..1751
                     /locus_tag="VLL76_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013294796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27912.1"
                     /translation="MSGWGCVHEVEGTCDRVAGRPCDPGMKGCILAGRFRFSNDAKNR
                     PPKPAKVPEPPPPRTED"
BASE COUNT          329 a          695 c          698 g          300 t
ORIGIN      
        1 accggcccag ggtgtcgagg tcgccggtgg cggcgacgta acgatccagt gcatggaacg
       61 accacagggt ggcgtcggcg gtgttgtatt ggccgtgggt ggcctggtcg gggaagtcgt
      121 tggggatcag gccgtctttc acatgggcca ggaaggtctg caggatccag cgcgcctcct
      181 ggtggcggcc ggtgaccaag gccaggccct cgagcgcgat catggtgtcg cgcccccaca
      241 ccgagaacca gtggtagccg gcgatgatgg cgcggatgtc ctcgccctgc gagcgggcgc
      301 ggacctgctc ggcgatgcgt gacagcggcg tgatgatgaa ggaatcggcg gtgaccacca
      361 gttcggcggc gatcccttcg cgcagggcgg gatgggcggc ctgggcgagg cggcggcggc
      421 ggccggtctc ccactcccac gcctcggcgg cggtcatggc ggtggcgacg tgccaatcct
      481 cgctggagac gaccaaggta accggccggc ctggcgccaa ggtcgcggcc agcacgcccg
      541 ggctccacag atgcccggtc gaggcgtagc cgcgctcttc ctcgcggaca taataggcat
      601 gggcgtcggt gccgtcgtcc agcgcgaagg cggcgccgtc gccggtcagg cgcaggcgag
      661 tcggcggcac gccgttgacc tggatctcga accggccctc ggccgcgcgc atcgtcgccg
      721 ggccgggaac ttcctcgtcc acctggcggt catggccgcg aaactggaac cacggcttca
      781 gcgccagcgc cagcggcgcg tcgccctcgg ccaggcggta ttcgacgtag gtggtgttct
      841 gctggtgcgg cattaccagc cgcttttcca ccagggcgcc gccgacacgg tagcgccaga
      901 ccggcaggcc ccattccagg cggaattcct caagggcacc gggatcggtc tcgtcggtgg
      961 tcagcgagat gccgccggcc gcctcgtcca ggcggttgag catcatcatg cggccgagcg
     1021 gcgccggcag cgaggcgacc agcgggccgt gatagcgccg ggtgggattg cctgcgacgg
     1081 tgccgcaggc atagccgcca aggccgttgg cgaccagcca ttccttttcc cgaaggccgt
     1141 cctgcggccg aacgatgcgc accacttcca tgagccccct ccgcgacgcc atgccccagg
     1201 atgggccggg gcctcggagg ggtcaagctc acatcggcct gccggtcggc ccttcccgcc
     1261 ccagcacctg ggcgctgtcg gcggcggatt tgcgcgaggc cggatagccg atcaactcgc
     1321 cgggttcggg cggcgaatgc tcgacgtcga tgacatcccc cagctcgtcg tccttgcggc
     1381 gcagcaggct ggcgaccagc agccccgcgc ccaccgccgc caatcccaaa gccgcgctcc
     1441 tgatcctcat gggtgacctc cttcgccaga tggggacctg gggaaaacag gggcggcggc
     1501 ttgggggttc cgaacgcgat ggaatgggct aagatcggcg tcgtcatcaa cggagaaacg
     1561 gcgtcatgag cggttgggga tgcgtccacg aggtcgaggg cacctgcgat cgggtcgccg
     1621 gccggccttg cgatcccggc atgaagggct gcatcctggc ggggcgcttc cgcttttcca
     1681 acgatgccaa gaaccgcccg cccaagccgg ccaaggttcc cgagccgcct ccgccccgta
     1741 ccgaggattg atccttttcc ccattcgacg cgcttcctgc gtctccggcg gctagccgga
     1801 tgcatcattg gggagtctat cgaacgcccc tgcaacccgt tccggtaaat cccgttccca
     1861 tcccagttgg caattcacaa cagggagcct accgatggcg aacggagcca ccgcaacaga
     1921 cacgcagagc acccaggtcc aggatcagac acaggatcag acacaggacc agacccaaac
     1981 cccgggccag gcgcagacca ccagcaccgc ccagcaatcc ga
//
LOCUS       DATIKR010000008         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_60666, whole genome shotgun sequence.
ACCESSION   DATIKR010000008 DATIKR010000000
VERSION     DATIKR010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60666"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VLL76_00100"
     CDS             complement(<1..655)
                     /locus_tag="VLL76_00100"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSV27913.1"
                     /translation="MNRLLRFLAAHRMHILVLVQAVMPILFVVASGFIFHEFVLTAVK
                     GHAILNAGIMVVGLFGAGLMIYRLVEAQREHSALLRFGRDAQAGASMKDLMEEEWLQN
                     RSMRRYLDHIAQTNGKLSSQLDQDAIENELHAIEADFDSKLELPNFLVGFMIAMGLLG
                     TFIGLLETLTGISGMLDGMASSGGGAVEEEFIKLVGELRKPLAGMGIAFSASMFGLVG
                     "
     gene            complement(655..1986)
                     /locus_tag="VLL76_00105"
     CDS             complement(655..1986)
                     /locus_tag="VLL76_00105"
                     /inference="COORDINATES: protein motif:HMM:TIGR01843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV27914.1"
                     /translation="MSKSVSTAADAALGRAGDFRALLRRWQRRLEAPRTFLVAVLALL
                     LLLLLWAGLAVVDKIVRVEGRIVPAGRAQQIQHLEGGIVAAITTAEGASVRKGELLLT
                     IDATTAGANLSETEVKLTGQRIRAARLEAEARGLDTLVIPPALDGPQAEGERRLFATR
                     RQKLEQELRVLDEQGRQRAAELSEVENRRQRLAGELATARQRSAILDGLAARNAASRL
                     EILDAVSREQRLATEMGDAEATLPKIRAAMAELRARAEDIRLRARSEAQEDLVAARVE
                     IDRLEQILTAQTDRVTRTDVRAPADGVVNRITVNTVGGVIKPGDVIVELTPTAGEVLI
                     EARARPSDRGDLRPGLDAKVRVSAYDTGQLGTLSGRVVEVSADTVQDGRQDPYYRVGI
                     RIDALPESYAGKLLAPGMTVTGDVVTGERTVLSHLTSPFSRFASNVFRDAR"
BASE COUNT          311 a          692 c          752 g          324 t
ORIGIN      
        1 tgccgaccag gccgaacatc gaggccgaga aggcgatgcc catgccggcc agcggcttgc
       61 gcaattcgcc caccagcttg atgaattcct cctcgacggc gccgccgccg gaggaggcca
      121 tgccgtcgag catgcccgag atgccggtca gggtttccag caggccgatg aaggtgccca
      181 gcaggcccat ggcgatcatg aagccgacca ggaagttggg cagctccagc ttgctgtcga
      241 aatcggcctc gatggcgtgc agttcgttct cgatggcgtc ctggtccaac tgcgacgaca
      301 gcttgccgtt ggtctgggcg atgtggtcga gatagcgccg catggagcgg ttctgcagcc
      361 actcctcctc catcaaatcc ttcatgctgg cgcccgcctg ggcatcgcgg ccgaaccgca
      421 gcagcgccga atgctcgcgc tgcgcctcga ccagccggta gatcatcagc ccggcgccga
      481 acaggccgac gaccatgatg ccggcgttga ggatcgcgtg ccccttgacg gcggtcagca
      541 cgaattcatg gaagatgaag ccggacgcca ccacgaacag gatcggcatg acggcctgga
      601 ccaggaccag gatatgcatg cgatgggcgg caaggaaacg cagcaggcgg ttcatcagcg
      661 ggcatcccgg aagacgttgg aggcgaatct ggaaaagggc gaggtcaaat ggctgagcac
      721 ggtccgctcg ccggtgacga cgtcgccggt gacggtcatg cccggggcca gcagcttgcc
      781 ggcataggat tcgggcagcg cgtcgatgcg gatgccgacg cggtaatagg ggtcctggcg
      841 gccgtcctgg acggtgtcgg cgctgacctc gaccactcgg ccgctgagcg tgcccaactg
      901 gccggtgtca taggccgaca cccgcacctt ggcgtccagg ccggggcgca ggtcgccgcg
      961 gtcgctgggc cgggcgcggg cctcgatcag cacttcgccg gcggtgggcg tcaactcgac
     1021 gatgacgtcg ccgggcttga tgacgccgcc gacggtgttg accgtgatgc ggttgaccac
     1081 gccgtcggcg ggggcgcgca cgtcggtgcg ggtgacgcgg tcggtctggg cggtcaggat
     1141 ctgctccagc cggtcgatct cgacgcgggc ggcaaccagg tcttcctgcg cctcggaccg
     1201 cgcccgcagg cggatgtcct cggcgcgggc gcgcagttcg gccatggcgg cgcggatctt
     1261 gggcagggtg gcctcggcgt cgcccatctc ggtcgccagc cgctgctcgc ggctgacggc
     1321 gtcgaggatt tccaggcgcg aggcggcgtt gcgggcggcg aggccgtcga ggatggccga
     1381 acgctggcgc gccgtcgcca attcgccggc cagccgctgg cggcggtttt ccacctcgct
     1441 cagttcggcg gcgcgctggc ggccctgctc gtcgagcacc cgcaattcct gttccagctt
     1501 ctggcggcgg gtggcgaaca ggcggcgctc gccctcggcc tgcggcccgt cgagggcggg
     1561 cgggatcacc agggtgtcga ggccgcgcgc ctcggcctcc aggcgggcgg cgcggatgcg
     1621 ctggccggtc agcttgacct cggtctcgct gagattggcg ccggcggtgg tggcgtcgat
     1681 ggtcagaagc agctcgccct tgcgcaccga cgcgccctcg gccgtggtga tggcggcgac
     1741 gatgccgccc tccaggtgct ggatctgctg ggcgcgcccg gccggcacga tgcggccctc
     1801 gacgcgcacg atcttgtcca ccacggcaag gccggcccac agcagcagca gcagcagcag
     1861 cgccagcacc gccaccagga aggtgcgcgg cgcctcgaga cggcgttgcc agcgtcgcag
     1921 cagagcccgg aaatcgccgg cccgccccaa agccgcgtca gcggctgtgg aaacggattt
     1981 cgacacggcc atcgccgatg tccttttgct gctcgatgac gacgttgatg gtcttgccgc
     2041 tgcccaatcc cttgtcgatc aggtagttgc ggatggtca
//
LOCUS       DATIKR010000009         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_12250, whole genome shotgun sequence.
ACCESSION   DATIKR010000009 DATIKR010000000
VERSION     DATIKR010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12250"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..404
                     /locus_tag="VLL76_00110"
     CDS             81..404
                     /locus_tag="VLL76_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HSV27915.1"
                     /translation="MKNLGNLMKQAQQMQAKMGEMQAKMAETEVTGASGGGMLQVTLN
                     GKFELKKIKIDKGLVDPEDVEVLEDLIVAAFNDAKQKAEAAMADEMAKLTGGLNLPAG
                     FKLPF"
     gene            568..1161
                     /gene="recR"
                     /locus_tag="VLL76_00115"
     CDS             568..1161
                     /gene="recR"
                     /locus_tag="VLL76_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HSV27916.1"
                     /translation="MIGPEIERLIQLLSRLPGLGPRSARRAALALVERREHLMVPLAE
                     ALAEAAERVKTCSVCGNFDTVDPCSVCADTRRDDAVLCVVEDVASLWAMERTGVFRGR
                     YHVLGGLLSALDGIGPDDLGIDRLAGRAGNGVVTEVILATPATVEGQTTAHYIADRLA
                     GSGVTVSGLAHGVPVGGELDYLDDGTISAALRARRSL"
     gene            1296..>1506
                     /locus_tag="VLL76_00120"
     CDS             1296..>1506
                     /locus_tag="VLL76_00120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27917.1"
                     /translation="MPHAPLCALVHASSSLEPQPLAASARACLADIRLVLDRHGFTRT
                     ANALLLARMALEDDLAEAQAMEAQEM"
BASE COUNT          248 a          520 c          516 g          222 t
ORIGIN      
        1 gtgcgcgaca tcgcgggcga ggagcccgag gaaggcgaga tcgccttcga cgcagaccag
       61 atcccaggag atgaggaagc atgaagaacc ttggcaacct gatgaagcag gcccagcaga
      121 tgcaggccaa gatgggcgag atgcaggcca agatggccga gaccgaggtc accggcgcct
      181 cgggcggcgg catgctgcag gtgacgctca acggcaagtt cgagctgaag aagatcaaga
      241 tcgacaaggg cctggtcgat cccgaggacg tcgaggtgct ggaagacctg atcgtcgccg
      301 ccttcaacga cgccaagcag aaggccgagg ccgccatggc cgacgagatg gccaagctca
      361 ccggcggcct caacctgccg gccggcttca agctgccgtt ctgatcccca ggggcggagg
      421 caccgtgcga cgagacacgg atggactcgg atcggccgct tcgcgtccgc acggatggac
      481 gggaagatcg ccgttcatcc gcgtgcccgc gccagcgggc ctccgtgtcc atccgtgtct
      541 gtttttcccg ttgccagacg tgaccccatg atcggccccg agatcgaacg cctgatccag
      601 ttgctgtcgc ggctgcccgg actggggccg cgctcggccc ggcgtgccgc cctggccctg
      661 gtcgagcggc gcgagcattt gatggtgccg ctggcggagg cgttggccga ggccgccgaa
      721 cgggtcaaga cctgttcggt gtgcggcaat ttcgacaccg tcgatccctg ttcggtctgc
      781 gccgacaccc gtcgcgatga tgccgtgctg tgcgtggtcg aggacgtcgc cagcctgtgg
      841 gcgatggagc gcaccggcgt gttccggggc cgctaccacg tgctgggggg gctgctgtcg
      901 gcgctggacg ggatcggccc cgacgacctc ggcatcgacc ggctggcggg gcgcgccggc
      961 aacggcgtcg tgaccgaggt catcctggcc actcccgcca ccgtcgaggg ccagaccacc
     1021 gcccattaca tcgccgaccg gctggcgggg tcgggcgtca ccgtatcggg cctggcccac
     1081 ggcgtgccgg tgggcggcga actcgactac ctggacgacg gcaccatcag cgccgccctg
     1141 cgcgcccgcc gcagcctgta aacgattttt taagcctttt ggcgtaggcg ccccgttcac
     1201 ccgggcgaac accttatgct ttcccgtcat ggcgcactcg gcctgtgcgc ggcacgatgc
     1261 cgcgcaacca caagacgtca ccacagggaa cgaccatgcc gcacgccccc ctctgcgccc
     1321 tcgttcacgc atcctcgagc ctggaacccc agccgctggc cgccagcgcg cgggcgtgcc
     1381 tggccgacat ccgcctggtg ctggaccgcc acggcttcac ccgcaccgcc aacgcgctgc
     1441 tgctggcccg catggcgctg gaagacgact tggccgaggc ccaggcgatg gaggcccagg
     1501 aaatga
//
LOCUS       DATIKR010000010         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_133294, whole genome shotgun sequence.
ACCESSION   DATIKR010000010 DATIKR010000000
VERSION     DATIKR010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133294"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VLL76_00125"
     CDS             complement(<1..1006)
                     /locus_tag="VLL76_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV27918.1"
                     /translation="MTSGQRYRFWLIGFAVFIAAVYVLRDMLLPFVAGMAIAYFLDPL
                     ADRLQRAGMSRTLATTAITASFFLIVILLVILLFPVIQDQVVGFAQRVPGYIDTLGDR
                     IEPYVRDLQRKLSARDMEKLRSSVGEYAGTAVGWVVDVGKRVLTGSLVVVNILSLLFI
                     TPIVTFYLLRDWDMMIRKVDSWLPREHAPTIREQAAEINRTLAGFLRGQATVCLALGA
                     FYGLGLTMVGLDLGLIIGLVAGLISFIPYLGTLSGFVVGVSVAVAQTHDWQLPAMVAA
                     VFVVGQVIEGNFLTPKLVGDRVGLHPVWVMFALLAGATLFGFVGMLLAVPVSASIGVL
                     V"
     gene            complement(1018..1566)
                     /locus_tag="VLL76_00130"
     CDS             complement(1018..1566)
                     /locus_tag="VLL76_00130"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSV27919.1"
                     /translation="MRHVPNALTILRLLSVPVTVWLMAAGELAAAFWLFAAAGFTDAL
                     DGAIARMFDAHSRLGQWLDPLADKVMLVSVYVALGVAGHIPLWLVVLVVLRDVVIVLY
                     AVVYVLAGAFSGSPLFISKINTAAQIVLAGVVLAHLGLGWGGIMLTEAFVYVVALTTS
                     ASGAAYLIAANRQVPPVDGGDA"
     gene            complement(1577..>2109)
                     /locus_tag="VLL76_00135"
     CDS             complement(1577..>2109)
                     /locus_tag="VLL76_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HSV27920.1"
                     /translation="ITAEQAMGGDLPSIQALSDAHRGADVMVVAAAMAAGGRQLDVVV
                     HGSGGAPKPFDTVAYTAQDNETPEALMARAVRDVQRAIDTVYKQPNMLQFDRAATISA
                     LVPLAGVEDWLAVRESLGRVSQVRKWELLSLSRDEAAVTMHVVGDQEQVKAALARQGL
                     QMEWGDGFWTVKPPRR"
BASE COUNT          404 a          751 c          690 g          264 t
ORIGIN      
        1 gcaccagcac gccgatggac gccgacaccg gcaccgccag cagcatgccg acgaagccga
       61 acagggtggc tccggccagc agggcgaaca tcacccacac cggatgcagg ccgacccggt
      121 cgcccaccag cttgggcgtc aggaagttgc cctcgatcac ctggccgacc acgaacacgg
      181 cagcgaccat ggcgggcaac tgccagtcgt gggtctgggc gaccgcgacg ctgacgccga
      241 ccacgaagcc cgacagggtg ccgagatagg ggatgaacga gatcaggccc gcgaccaagc
      301 cgatgatcag gccgaggtcg aggccaacca tggtcagccc caggccgtag aacgcgccca
      361 aggccaggca gacggtcgcc tggccgcgca ggaagccggc cagcgtgcgg ttgatctcgg
      421 ccgcctgctc gcggatggtc ggggcgtgct cgcgcggcag ccacgaatcc actttcctga
      481 tcatcatgtc ccagtcgcgc agcagataga acgtgacgat gggggtgatg aacagcagcg
      541 acaggatgtt gaccaccacc aggctgccgg tcagcacgcg cttgcccacg tccaccaccc
      601 agcccaccgc cgtccccgcg tactcgccca ccgacgagcg cagcttttcc atgtcgcggg
      661 ccgacagctt gcgctgcagg tcgcggacat agggttcgat gcggtcaccc agcgtgtcga
      721 tatagccggg cacgcgctgg gcaaagccca ccacctggtc ctggatcacc gggaacaaca
      781 ggatcaccag caggatcacg atcaggaaga acgaggcggt gatggccgtg gtcgccaggg
      841 tgcgcgacat cccggcccgc tgcaggcggt cggccagggg atcgaggaaa taggcgatgg
      901 ccatgccggc gacgaagggc agcagcatgt cgcgcaacac gtacaccgct gcgatgaata
      961 ccgcgaagcc gatcagccag aaccgatagc gttgacccga cgtcatcaac tcccccctca
     1021 cgcatccccg ccgtcaaccg gcggaacctg ccggttggcg gcgatcagat aggccgcccc
     1081 cgaggcggac gtggtcaagg cgaccacata gacgaacgcc tcggtcagca tgatcccacc
     1141 ccaccccagg cccagatggg ccagcaccac cccggccagc acgatctggg cggcggtgtt
     1201 gatcttcgag atgaacaggg gcgaaccgct gaaggcgccc gcaagcacgt acaccacggc
     1261 atagagcacg atgaccacat cgcgcaagac cacaagcaca accaaccata ggggaatgtg
     1321 cccggcgacg cccaacgcca cgtagaccga caccagcatg accttgtcgg ccagcgggtc
     1381 cagccattgc cccagccgcg aatgggcatc gaacatgcgg gcgatggcgc cgtccagcgc
     1441 gtcggtgaag ccggccgccg cgaacagcca gaacgccgcc gccagctcgc ccgccgccat
     1501 cagccagacg gtgaccggga ccgacagcag ccgcaggatg gtgagggcgt tcgggacgtg
     1561 gcgcacggcc ttggcgtcac ctccgtggcg gcttgacggt ccagaacccg tccccccatt
     1621 ccatttgcag gccctggcgc gccaatgcgg ccttcacctg ctcctggtcc cccaccacgt
     1681 gcatggtcac cgccgcctcg tcgcgcgaca gcgacagcaa ttcccacttg cggacctgcg
     1741 acacccggcc cagcgattcg cgcaccgcca gccaatcctc gacgccggcc agcggcacca
     1801 gggccgagat ggtggcggcg cggtcgaact gcagcatgtt gggctgcttg tagacggtgt
     1861 cgatggcgcg ctggacgtcg cgcacggcgc gcgccatcag ggcctcgggg gtctcgttgt
     1921 cctgggcggt gtaggccacg gtgtcgaacg gcttgggcgc cccgcccgag ccgtgcacca
     1981 cgacgtcgag ctgacggccg ccggccgcca tggcggcggc gaccaccatc acgtcggcgc
     2041 cgcgatgggc gtcggacagc gcctggatgc tgggcaggtc gccgcccatg gcctgttcgg
     2101 cggtgatgt
//
LOCUS       DATIKR010000011         3759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_24365, whole genome shotgun sequence.
ACCESSION   DATIKR010000011 DATIKR010000000
VERSION     DATIKR010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3759
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24365"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..484)
                     /locus_tag="VLL76_00140"
     CDS             complement(2..484)
                     /locus_tag="VLL76_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HSV27921.1"
                     /translation="MTLCPCGSGRGLELCCGPIVAGAAAPTAEALMRSRYTAFVVGNL
                     DYLETTLAPEAKDDYDRAETEAWIKEGQWQGLEVRATEAGGEGDEEGTVEFVARYKFR
                     GKPFAHHELASFRKVEGRWQYVDGVINPKPAQRVGAKVGRNDPCTCGSGKKYKKCCGA
                     "
     gene            complement(505..852)
                     /locus_tag="VLL76_00145"
     CDS             complement(505..852)
                     /locus_tag="VLL76_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27922.1"
                     /translation="MANDGAFEMLFDRIPAEVAGTFTDQQRAALYSAVKPTTWKRHPI
                     NIRLSFPFVGGRYFITVVGGQEKRSTERLAREHRMFPFRTIGNVMFLMGVGGAFYLAA
                     LFGMVIFSGLIEF"
     gene            complement(881..1801)
                     /locus_tag="VLL76_00150"
     CDS             complement(881..1801)
                     /locus_tag="VLL76_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSV27923.1"
                     /translation="MSTVPDEKRRSNLGRGLSALLGDSGAAVAASVIEGAPPVAGASR
                     NTQRTLAVSQMKPGKYQPRRQFDEDAIADLVESVREKGVLQPILVRPYDGAYEIIAGE
                     RRWRAAQRAQLHEVPVIVREMTDREALEVALVENLQRQDLSPLEEAEGYKRLIDEFSH
                     TQEELAKALGKSRSHVANMMRLLALPDPIKGMVDDGKLTAGHARALLTATDPVGLARE
                     VVDKHLNVRQTEKLVAEQGKPAGAASKGGRPPAHAKDADTAALERDLTDLLGVRVTIK
                     PLGKGGELTVHYGSLEQLDDVLSRLTAERD"
     gene            complement(1798..2610)
                     /locus_tag="VLL76_00155"
     CDS             complement(1798..2610)
                     /locus_tag="VLL76_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSV27924.1"
                     /translation="MVEQSVSSAPTKARIIAIANQKGGVGKTTTAINLATAMAATRKK
                     VLIIDLDPQGNASTGLGIDRNAREINSYHVLIGEAQLAEALLTTTIPGLDVVPSGIDL
                     SGAEIELVTMSRRESRLREQLANAAQSYDYILIDCPPSLNLLTLNAFVAAHSVMVPLQ
                     CEFFALEGVSHLVKTIDMVKSAFNPTLELQGIVLTMFDKRNNLSDMVAADVRGFFGDK
                     VYKTVIPRNVRISEAPSHGKPVLLYDVKCAGAEAYIHLASEVLKRERVRARA"
     gene            complement(2591..3208)
                     /gene="rsmG"
                     /locus_tag="VLL76_00160"
     CDS             complement(2591..3208)
                     /gene="rsmG"
                     /locus_tag="VLL76_00160"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HSV27925.1"
                     /translation="MTPEDFQNATSVSRETLDRLRIYADLLVKWQAKINLVGPDTIPN
                     LWQRHFLDSAQVFPLLPQPVHRLVDMGSGAGFPGLVLAILGVADVHMIESDARKCAFL
                     REAARLTGAGVTIHNSRIEKVAPLGADVVTARALAPLEKLLEWAEPHLLPGGHCLFLK
                     GRGHEDELTTASKEWNITCERTPSQTDPLGAILHIREVSRGRAKR"
     gene            complement(3237..>3759)
                     /locus_tag="VLL76_00165"
     CDS             complement(3237..>3759)
                     /locus_tag="VLL76_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HSV27926.1"
                     /translation="TPKGEGAGCIGSERSLRFRKKEEALVAGRQLLAELRASPTVLKR
                     QGLEVNQDGVVRSAWDLLAYPTIDLARLAGLWPEIGALRADVAEQLEIEGKYHAYLQR
                     QETDIRTYRRDEDLALPDDLDYDAIGSLSNEVRSKLKAARPETLAAAARIPGVTPAAL
                     TALLGHVKKKTAA"
BASE COUNT          581 a         1248 c         1255 g          675 t
ORIGIN      
        1 gttacgcccc gcagcacttc ttgtatttct tgcccgagcc gcaggtgcac gggtcgttgc
       61 ggccgacctt ggcgccgacg cgctgggccg gcttggggtt gatgacgccg tccacatact
      121 gccagcggcc ctcgaccttg cgaaagctgg ccaactcgtg gtgggcgaag ggcttgccgc
      181 ggaacttgta gcgggcgacg aattcgaccg tgccctcctc gtcgccctcg ccgccggcct
      241 cggtggcccg gacctccagg ccctgccact ggccttcctt gatccacgcc tcggtctcgg
      301 cgcggtcgta atcgtccttg gcctcgggcg ccagggtggt ttccaggtaa tccaggttgc
      361 cgaccacgaa ggcggtgtag cgcgagcgca tcagcgcctc ggcggtgggc gcggcggcgc
      421 cggcgacgat ggggccacag cagagttcga ggccgcggcc ggagccgcag gggcacagag
      481 tcatgatcgg aacacccttg aagatcagaa ttcgatgagg ccggagaaga tcaccattcc
      541 gaacagggcg gcaagataga aagcgccgcc gacgcccatc aggaacatga cgttgccgat
      601 ggtgcggaac ggaaacatgc ggtgctcgcg ggccaggcgc tcggtcgagc gcttttcctg
      661 gccgccgacc acggtgatga aatagcgccc gccgacgaag gggaagctga ggcggatgtt
      721 gatgggatga cgcttccacg tggtcggctt gacggcgctg tagagcgccg cccgttgctg
      781 atcggtgaag gttcccgcca cttccgccgg gatgcggtcg aacagcatct cgaatgcgcc
      841 gtcgttcgcc atcctcttcc ccccttcgaa cgtcgagttc ctagtcccgc tcggccgtca
      901 gccgcgacag cacgtcgtcg agctgttcca ggctgccgta atgcaccgtc agctcgccgc
      961 ccttgcccag cggcttgatg gtgacgcgca cccccagcaa gtcggtgagg tcgcgttcca
     1021 gcgccgccgt gtcggcatcc ttggcatggg ccggcggacg gccacccttg gacgcggcgc
     1081 cggcgggctt gccctgctct gccaccagct tttccgtctg gcggacgttg agatgcttgt
     1141 ccaccacctc gcgcgccagc ccgaccgggt cggtggcggt cagcagggcg cgggcgtggc
     1201 cggccgtcag cttgccgtcg tcgaccatgc ccttgatggg atcgggcagc gccagcaggc
     1261 gcatcatgtt ggcgacatgg ctgcggcttt tgcccaaagc cttggccagt tcctcctggg
     1321 tgtggctgaa ctcgtcgatc aggcgcttgt agccctcggc ctcttccagc ggcgacaggt
     1381 cctggcgctg caggttctcg accagcgcca cttccagcgc ctcacggtcg gtcatctcgc
     1441 ggacgatgac cggcacctcg tggagctgcg cccgctgggc ggcacgccag cggcgctcgc
     1501 cggcgatgat ctcgtaggcg ccgtcatagg gccgcaccag gatcggctgc agcacgccct
     1561 tttcgcgcac cgattcgacc agatcggcga tggcgtcctc gtcgaactgg cggcgcggct
     1621 ggtacttgcc cggcttcatc tggctgaccg ccagggtgcg ctgggtattg cgcgacgcgc
     1681 ccgccaccgg cggtgcgccc tcgatcaccg aggcggcgac cgccgcgccc gaatcgccca
     1741 gcagggccga caggccacgg cccaaattgc tgcgtcgctt ttcgtcagga acagtactca
     1801 cgcccgagcc ctcacacgtt cacgcttcaa aacctcgctg gcgaggtgga tataggcttc
     1861 cgcgccggca cacttcacgt cgtacagcag caccggcttg ccgtgggacg gcgcctcgga
     1921 gatgcggacg ttgcgcggga tcaccgtctt gtagaccttg tcgccgaaga agccgcgcac
     1981 gtcggcggcc accatgtcgg acaggttgtt gcgcttgtcg aacatggtca ggacgatgcc
     2041 ctgcagctcc agcgtcgggt tgaacgccga cttgaccatg tcgatggtct tgaccaggtg
     2101 gctgacgccc tccagcgcga agaactcgca ttgcagcggc accatcaccg aatgcgccgc
     2161 cacgaaggcg ttcagcgtca gcaggttcag cgacggcggg cagtcgatca ggatgtagtc
     2221 ataggactga gccgcgttgg caagctgctc gcgcagcctc gattcgcgcc gggacatggt
     2281 gaccagctcg atctcggcac ccgacaggtc gatgcccgag ggcaccacgt cgaggccggg
     2341 gatggtggtg gtcagcagcg cctcggccag ctgcgcctcg ccgatcagca cgtggtagga
     2401 attgatctcg cgggcattgc ggtcgatgcc caggccggtg ctggcgttgc cctggggatc
     2461 gaggtcgatg atcaggactt tcttgcgggt cgccgccatg gcggtcgcca gattgatggc
     2521 ggtggtcgtc ttgccgacgc cgcctttctg gttcgcgatg gcgatgatcc gggccttcgt
     2581 gggggcgctg ctaacgcttt gctcgaccac gggatacctc tcgtatgtga aggatggcgc
     2641 ctaaaggatc cgtttgggat ggggtcctct cgcaggtgat attccattct ttagaggccg
     2701 tggtcaattc gtcttcgtgt cccctgccct tcaggaacag gcagtggccc cccggcaaca
     2761 ggtgcggttc ggcccattcc agcagctttt ccagcggcgc cagggcgcgg gcggtgacca
     2821 cgtcggcgcc cagcggcgcc actttttcga tgcgggaatt gtggatggtc acgccggcgc
     2881 ccgtcagccg cgccgcctcg cgcaggaagg cgcatttacg ggcgtcgctc tcgatcatgt
     2941 ggacgtcggc aacccccagg atcgccagca ccagaccggg aaagccggcc cccgagccca
     3001 tgtcgacaag tctgtggaca ggctgtggaa gaagtgggaa aacctgcgcc gaatcgagga
     3061 aatggcgttg ccacaggttg gggatggtat cggggccgac caggttgatc ttggcctgcc
     3121 acttgaccag caggtcggca tagatgcgca ggcggtccag tgtttcacgt gaaacactgg
     3181 tggcgttctg aaaatcctcg ggcgtcatcc ccaatcccca tgtttcacgt gaaacatcac
     3241 gcggcggtct tcttcttgac gtggcccagc agcgcggtca gcgccgccgg ggtcacgccg
     3301 ggaatgcggg cggcggcggc cagcgtctcg ggccgggccg ccttgagctt gctccgcacc
     3361 tcgttggaca gcgagccgat ggcgtcgtag tccagatcgt cgggcagcgc cagatcctcg
     3421 tcgcggcgat aggtacggat gtccgtctcc tgccgctgca gataggcgtg atacttcccc
     3481 tcgatctcaa gctgctcggc gacgtcggcg cgcaacgccc cgatctcggg ccacagcccg
     3541 gccaagcggg ccaggtcgat ggtgggatag gccagcaggt cccaggccga acggaccacg
     3601 ccgtcctggt tgacctccag cccctggcgt ttcagcacgg tgggcgacgc ccgcaactcc
     3661 gccagcagtt ggcggccggc caccaacgcc tcctccttct tccggaagcg caaggatcgc
     3721 tcggacccga tgcagccggc cccctcgccc ttgggcgtc
//
LOCUS       DATIKR010000012         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_72839, whole genome shotgun sequence.
ACCESSION   DATIKR010000012 DATIKR010000000
VERSION     DATIKR010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72839"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1252
                     /locus_tag="VLL76_00170"
     CDS             <1..1252
                     /locus_tag="VLL76_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27927.1"
                     /translation="HSSAPHLAQNTLVAKDLLTQMMSMPAIDLGTAKTMADIHQKGTG
                     HVNPGGAFGIDVPYIAGAEKNIALGKALQGKVEDDKPRPDKVGTVLNWNTPAMKTAGI
                     TSMFTGSGTPAQQADNATNFQMEQAGMPILPLDAIVRELMAKEQELAVRQDTIAQQEA
                     ELQQAMMAMQGVQGAYQQQYGAPPEGGMGGDQGDPAGMDQGGDQGGQGGEDPMAGGQD
                     GGDPTAGDPAAASGDQGGQDPMAGDPAAAQPPPPPATIGSTPGPSGSGSDAAAMLGMT
                     PGQPAAPAPAPAPAPEQGGTGDEAGKEDKAEGEDAGQAPEGDGQVPPAGEAGIEDGAT
                     GGQDLVGGAPPASTEGFPPSAGQPEATTIPAGAPVTDGNALTVTVPLPSLQISVKLAE
                     QAAEDRMDAARALFSKTMTDIFRP"
     gene            1263..2270
                     /locus_tag="VLL76_00175"
     CDS             1263..2270
                     /locus_tag="VLL76_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27928.1"
                     /translation="MLISIKKTVSNKVHTAQVTVQTDALENEYFTAFGEPRIDLAGEI
                     PFTPTAPSVPPGQITLDEEVDLGTPGASGDATEVAALDALEIKGAGKFPTLLTDTVGF
                     FKHAREVVGDFEMRARIDYVDGGLVDSGADPTTNDGFRVGMALYDGDASDDPSIIFGW
                     GAHQSAYNLVLWHRTAKDGAYSQINAIARSDFKGLFLRLVRESLTLKAYYSIDNGDTW
                     NLMATTTLARQAYRVGLFINSGIDDELCTAVISSLSLTALPVEDQNIFTIEGGPNLAY
                     MRSQSPHTFSIDGKVDPEAENKVSGWADEIKTRLVTAKSDLFSGNPAPSGGDETTIYQ
                     A"
     gene            2277..>2633
                     /locus_tag="VLL76_00180"
     CDS             2277..>2633
                     /locus_tag="VLL76_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27929.1"
                     /translation="MTMEVKAASFKVAYVIPPIQTYGGKTVNEPGLLPSIGGGMLGSG
                     VGAITGPIGSHMGSKSIIEDPDLSPAQRQFLEMHPPHSGAAAPFWGGALGTLAGGLGG
                     IALDQLIPGGSNIPLVA"
BASE COUNT          487 a          958 c          848 g          340 t
ORIGIN      
        1 gcattcgtcg gctccgcacc tggcccagaa taccctggtc gccaaggatc tgctgaccca
       61 gatgatgtcg atgccggcga tcgatctcgg cacggccaag accatggccg acatccacca
      121 gaaggggacc gggcatgtga accccggcgg cgccttcggc atcgatgtcc cgtacatcgc
      181 tggagcggag aagaacatcg cgctcggcaa ggcgctgcag gggaaagtgg aagacgacaa
      241 gccccggccg gacaaggtcg gcaccgtcct caactggaac accccggcca tgaagaccgc
      301 gggcatcacc agcatgttca ccggctccgg caccccggcc cagcaggctg acaatgccac
      361 caacttccag atggagcagg ccggcatgcc gatcctgccc ctcgacgcca tcgtccgcga
      421 gctgatggcg aaggagcaag agctggccgt ccgccaggac accatcgccc agcaggaagc
      481 cgagctgcag caggccatga tggccatgca gggcgtccag ggcgcatacc agcagcaata
      541 cggcgccccg ccggaaggcg gcatgggcgg cgaccagggc gaccccgctg gcatggacca
      601 gggcggcgac cagggcggcc agggcggtga agaccccatg gccggcggcc aggacggtgg
      661 agaccccacg gccggcgatc cggcggcagc cagcggcgac cagggcggcc aggaccccat
      721 ggctggtgac ccggccgcgg cgcagccccc gcctcccccg gccaccatcg gctcgacccc
      781 tggcccctcg ggcagcgggt cggacgcggc ggccatgctg ggcatgaccc ccggccagcc
      841 ggcggcccct gcccccgcgc ctgccccggc ccctgagcag ggcggtaccg gcgacgaagc
      901 tgggaaggaa gacaaggcgg aaggcgaaga cgctggccag gcccccgagg gcgacggcca
      961 ggttcccccg gccggcgagg ccggcatcga agacggtgcc accggcggcc aggacctcgt
     1021 cggcggcgct ccgccggcct cgaccgaagg cttcccgccg tcggccggcc agcccgaggc
     1081 gaccacgatc cccgccggtg ccccggtgac ggatggcaat gccctgaccg tgaccgtccc
     1141 gctgccctcg ctgcagatca gcgtgaagct ggccgagcag gctgcggaag atcggatgga
     1201 cgccgcccgc gccctgttca gcaagaccat gaccgacatc ttccgcccct gaaggactga
     1261 acatgctcat cagcatcaag aagaccgtct cgaacaaggt gcacaccgca caggtgaccg
     1321 tgcagacgga cgcgctggag aacgagtact tcaccgcctt cggcgagccg cggatcgacc
     1381 tggccggcga gatccccttc accccgacgg cgccctcggt gccgcccggc cagatcaccc
     1441 tcgacgaaga ggtggacctg ggcacccccg gtgccagcgg cgacgccacc gaggtcgccg
     1501 cgctcgacgc gctggagatc aagggcgcgg gcaagttccc cacgctcctg accgacaccg
     1561 tcggcttctt caagcacgcc cgtgaggtgg tcggcgactt cgagatgcgg gcccgcatcg
     1621 actacgtcga cggcggcctg gtggattccg gtgcggatcc caccacgaat gatggcttcc
     1681 gcgtcggcat ggccctctac gacggcgacg ccagcgacga ccccagcatc atcttcggct
     1741 ggggcgccca ccagtcggcc tacaacctgg tcctgtggca ccgcaccgcg aaggacggcg
     1801 cctacagcca gatcaacgcc atcgcccggt cggacttcaa gggcctgttc ctgcgcctgg
     1861 tgcgcgagag cctgaccctg aaggcctact actcgatcga caacggtgac acctggaacc
     1921 tgatggccac gaccacgctg gcccgacagg cctaccgcgt cggcctcttc atcaacagcg
     1981 gcatcgacga cgagctgtgc accgcggtca tcagcagcct ctccctgacc gccctgccgg
     2041 tggaagacca gaacatcttc accatcgagg gcggccccaa cctggcctac atgcgctccc
     2101 agtccccgca caccttctcg atcgacggca aggtggaccc cgaggcggag aacaaggtgt
     2161 ccggctgggc cgacgaaatc aaaacccggc tggtcacggc gaagagcgac ctcttctccg
     2221 gcaacccggc cccgagcggt ggcgacgaaa ccaccatcta ccaagcctga aggaacatga
     2281 ccatggaagt caaagcagct tcattcaagg tcgcctacgt cattccgccg attcagacgt
     2341 acggcggcaa gaccgtcaat gagcccgggc tgctgccgag cattggtgga ggcatgctcg
     2401 ggtctggcgt tggcgccatc acgggtccga ttggcagtca catgggctcc aagtccatca
     2461 tcgaagatcc ggacctctct ccggcgcagc gtcagttcct ggaaatgcac ccgccgcact
     2521 ctggtgctgc cgcgccgttc tggggcggtg ccctcggcac tctggccggc ggtctgggcg
     2581 ggatcgccct ggatcagctc atcccaggtg gatcgaacat ccccctggtg gca
//
LOCUS       DATIKR010000013         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_121266, whole genome shotgun sequence.
ACCESSION   DATIKR010000013 DATIKR010000000
VERSION     DATIKR010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121266"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VLL76_00185"
     CDS             complement(<1..219)
                     /locus_tag="VLL76_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV27930.1"
                     /translation="MQTFFTPAQLAKPDIAAADDILRKCVHCGFCTATCPTYVLLGDE
                     NDSPRGRIYLIKDMLENDKPASPKVALHI"
     gene            complement(222..1382)
                     /gene="glcE"
                     /locus_tag="VLL76_00190"
     CDS             complement(222..1382)
                     /gene="glcE"
                     /locus_tag="VLL76_00190"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007670605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcE"
                     /protein_id="HSV27931.1"
                     /translation="MLAKPANAEQLKDAIGAALADNRPLEVIGAGSKRGYGRPLQTAG
                     TLDLSALSGIVSYEPEELVVSVRAGTLLAELKAALAERRQRLAFEPADWGVLLGSGAN
                     RATIGGIVAANVAGPRRVSQGAARDHVLGLKCVSGRGEDFVCGGRVVKNVTGFDLPKL
                     LTGSLGTLAVIHEITLRVAPWPDAACTLALRDLDDSRAVAAMTKALSSPYEVSAAAHA
                     GGTTALRLEGPLVSVAARAEALSHELTAFGPVARLDGEQSLRLWRGVRNVTAFATDDR
                     IVWRLMVPPAASARVVAAIAASHQCEAIYDRGGALVWLALAGPDAAPDFVRGVVEGMA
                     GHATLFRAPEAIRAKVPPFHPEPAALHQLSARLKAAFDPQRILNPGRMAADI"
     gene            complement(1382..>2134)
                     /locus_tag="VLL76_00195"
     CDS             complement(1382..>2134)
                     /locus_tag="VLL76_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSV27932.1"
                     /translation="AVAAIIAAGIIPAGLEMMDRPAIHAAEEFCHAGYPLDVEALLIA
                     ELDGPVAEVDHLIATVGAICREAGATIVRVSNSDEERQLFWLGRKSAFPAVGRISPDY
                     LCMDGTIPRKRLPYVLQRTAELASKYRLRVANVFHAGDGNLHPLILFDANLPGELERA
                     EALGADILRLCVEVGGVLTGEHGVGVEKRDLMGEMFTETDLAHQMLVKCAFDEKGLLN
                     PGKVFPTLHRCADMGWMRVTAGTSPFADLPRF"
BASE COUNT          337 a          712 c          766 g          319 t
ORIGIN      
        1 gatatggagc gccaccttag ggctggccgg cttgtcgttc tccagcatgt ccttgatcag
       61 gtagatgcgg ccgcgcgggc tgtcgttctc gtcgcccagc aggacatagg tcgggcaggt
      121 ggcggtgcag aagccgcaat ggacgcattt gcgcagaatg tcgtcggcgg cggcgatgtc
      181 gggcttggcg agttgggccg gggtgaagaa ggtttgcata tctatatgtc cgccgccatg
      241 cggccgggat tgaggatgcg ctggggatcg aaggcggcct tgaggcgggc cgataattgg
      301 tggagcgccg ccggctcggg atggaagggc ggcaccttgg cgcggattgc ttctggggcg
      361 cggaacaggg tggcatggcc ggccatgccc tccaccacgc cacgcacgaa gtcaggggcc
      421 gcgtcggggc cggccagcgc cagccatacc agggcgccgc cgcgatcgta gatcgcctcg
      481 cattgatggc tggcggcgat ggccgcgacc acacgggccg aggctgccgg cggcaccatc
      541 aggcgccaga cgatgcggtc gtcggtggcg aaggcggtga cattgcgcac gccccgccag
      601 agccgcagcg attgctcgcc gtccagccgc gccaccggcc cgaaggcggt cagttcgtgg
      661 gacagcgcct cggcgcgggc ggccaccgac accagcggac cttccagccg caaggcggtg
      721 gtgccgccgg catgggcggc ggccgaaacc tcataggggc tggacagcgc cttggtcatg
      781 gcggcgacgg cgcgggaatc gtcaaggtcg cgcagcgcca gcgtgcaggc tgcgtcgggc
      841 cagggcgcca cccgcagggt gatctcgtga atcaccgcca gggtgcccag cgaaccggtc
      901 agcagcttgg gcaggtcgaa gccggtgacg ttcttgacca cccggccgcc gcagacgaaa
      961 tcctcgcccc ggcccgacac gcatttcagc cccagcacgt ggtcgcgggc ggcgccttgc
     1021 gacacccggc gggggcctgc gacgttggcc gcgacgatgc cgccgatggt ggcacgattg
     1081 gcgccgcttc ccagcagcac gccccaatcg gcgggttcga aggccaggcg ctggcggcgc
     1141 tcggccaaag cggccttcag ttcggccaac agggtgccgg ccctgacgga gaccaccaac
     1201 tcctcgggct cgtaggagac gatgcccgac agtgccgaca ggtccagcgt gccggcggtc
     1261 tgcagcgggc gaccatagcc ccgcttgctg ccggcaccga tcacctccag cggccgattg
     1321 tcggccagcg cggcgccgat ggcgtccttc agttgctcgg cgttggcggg cttggcgagc
     1381 atcagaacct cggcaagtcg gcaaagggcg acgttccggc ggtcacccgc atccagccca
     1441 tgtcagcgca gcggtgcaac gtcgggaaca ccttgccggg attgagcagt cccttctcgt
     1501 cgaaggcgca tttgaccagc atctggtgcg ccaggtcggt ctcggtgaac atctcgccca
     1561 tcaggtcgcg cttttcgacg ccgacgccat gctcaccggt cagcaccccg ccgacttcga
     1621 cgcacaggcg caggatgtcg gcgcccaggg cttccgccct ctccaactcg ccggggaggt
     1681 tggcatcgaa caggatcagc ggatgcaggt tgccgtcacc ggcatggaac acgttggcca
     1741 cccgcagccg gtacttggac gccagctcgg cggtccgctg cagcacatag ggcagccgct
     1801 tgcgcgggat ggtgccgtcc atgcacagat aatcgggcga gatgcggccg accgccggga
     1861 aggccgattt gcggcccagc cagaacaatt gccgctcttc gtcgctgttc gacacccgca
     1921 cgatggtggc gccggcctcg cggcagatgg cgcccacggt ggcgatcagg tggtcgactt
     1981 cggccaccgg gccatccagc tcggcgatca gcaaggcttc cacgtccagc ggatagccgg
     2041 cgtggcagaa ttcctcggcg gcgtggatgg cggggcggtc catcatctcc aggccggcgg
     2101 gaatgatgcc ggccgcgatg atggccgcca ccgc
//
LOCUS       DATIKR010000014         3376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_97028, whole genome shotgun sequence.
ACCESSION   DATIKR010000014 DATIKR010000000
VERSION     DATIKR010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97028"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VLL76_00200"
     CDS             complement(<1..234)
                     /locus_tag="VLL76_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflK N-terminal
                     domain-containing protein"
                     /protein_id="HSV27933.1"
                     /translation="MAWNQGGGGGPWGGGGGGGNGPWGRGPGGGGGGGGPGTPPDFEE
                     IIRRGQEKLRRAVPRQQFFGQGKGLLIIVALAAA"
     gene            546..1664
                     /gene="apbC"
                     /locus_tag="VLL76_00205"
     CDS             546..1664
                     /gene="apbC"
                     /locus_tag="VLL76_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HSV27934.1"
                     /translation="MADVNEQHVLDALKRIVDPDKKADIVSLGMVSNIVVKNGHVAFA
                     IEVEPERGPSLEPLRKAAEDAVHGLPGVLTVSAVLTAERNVHGGPKGGTPQHGHGGQG
                     QDAPLLPQTKAIIAVASGKGGVGKSTTSTNLAMALAQQGLKVGLFDADIFGPSMPRML
                     GITGEPVSPDGQSLMPMENYGVKCMSMGFLVPEDSPIIWRGPMVMGALEQLLRDVRWG
                     ELDVMVIDMPPGTGDTQLTMTQRLPLTGAVIVSTPQDIALLDARKGLNMFRKVDVPVL
                     GIIENMSYYVCPKCGDEAHIFGHGGAKAEAARLSTEFLGEIPLDIAIRETSDAGEPIV
                     ISKPSSPHAKAYREIAAKIWEKVQVIQGSAKKPKISFE"
     gene            1871..>3376
                     /locus_tag="VLL76_00210"
     CDS             1871..>3376
                     /locus_tag="VLL76_00210"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HSV27935.1"
                     /translation="MIRSFFTTAPQPRTSGLGAGLSAEDDDRVPAFQKAWKDGATFED
                     MFGPSPFSLHGTVGGSGADNHRPDVAKVETFLGDAGYYKPMTNDGPAGWHNTNLDTAI
                     KSFQKDHGLKVDGLLKPNGPTIGKLGGVLGGGAQPQAKPASIMPMPGDPDYHPIGGVT
                     PPKANPWGSAESADRWEAGNMAKVLLGRSDYQDAVKHFAGEFARAPDTAKPYTAAVYD
                     EMAKANPKQAIHFASQMKAAGLVEEKPSDGAGSNTLVGGAGDDGPKPAPEPQSKPEPK
                     PQEPAPAPQKPEPAPAGSGKKDDLKPTDKAVDPNDLYKQLGVIAEQSLKGPPPGTPAL
                     VTQARDMCRDGDEVFAQQPEGAPGCISCLQRHHRSPSRVIIFSKPTRDTPSRRAAALW
                     LLAVAARAAVIRRRSRSARASARVDGCAVREPAGSPLRAKIRSSGPMAPSPAGSARAA
                     AEAITAFSSRTLPGQSCSASQEKASGVRRNRRAFPASSRKRAASGAMSSRRS"
BASE COUNT          618 a         1192 c         1086 g          480 t
ORIGIN      
        1 ggcggccgcc agcgcgacga tgatcagcag gcccttgccc tggccgaaga attgctgcct
       61 gggcacggcc cggcgcagtt tctcctggcc tcggcggatg atctcctcga agtcgggggg
      121 ggtgccgggg ccgccgccac cgccaccgcc gccgggacca cggccccacg gaccgttgcc
      181 gccaccgccg ccaccacccc agggtccacc accgccccct tgattccaag ccattcgacg
      241 ttcctctcga tgtgcacgcg ggtgaaccga accatcggcc cgaaaatcgg gcctcttggc
      301 cttatagggc accattccac cgctggcaac gcgcggaagg gttggctctc ccggatttgg
      361 ccgatatgga taagaagggc ggcttttcaa gtcgaaggag gaagcggctt ctccatcgtc
      421 aaggcttgac cctttgcaaa cgaggtagtc actcttatat gagacaacgc ttgagtttcc
      481 cgtaaccggc tcctagagtc ccaccaaaca actcggataa gcccccaatc ccggagaaaa
      541 ggtccatggc tgacgtcaac gagcagcacg ttctcgatgc cctgaagcgc atcgtcgatc
      601 ccgacaagaa ggccgacatc gtcagcttgg ggatggtttc caacatcgtg gtcaagaacg
      661 gccacgtcgc cttcgccatc gaggtcgagc ccgagcgcgg cccgtcgctg gagccgctgc
      721 gcaaggcggc cgaggatgcc gtccacggcc tgcccggcgt gctcaccgtg tcggcggtgc
      781 tgaccgccga gcgcaacgtc catggcggcc ccaagggcgg cacgccgcag cacggccatg
      841 gcggccaggg ccaggacgcg ccgctgctgc cgcagaccaa ggcgatcatc gcggtggcct
      901 cgggcaaggg cggcgtcggc aagtccacca cctcgaccaa cctggccatg gcgctggcgc
      961 agcagggcct gaaggtcggc ctgttcgacg ccgacatctt cggcccgtcg atgccgcgca
     1021 tgctgggcat caccggcgag ccggtcagcc ccgacggcca gagcctgatg cccatggaga
     1081 attacggcgt caagtgcatg tccatgggct tcctggtgcc cgaggacagc ccgatcatct
     1141 ggcgcggccc gatggtgatg ggcgcgctgg agcagcttct gcgcgacgtg cgctggggcg
     1201 agttggacgt catggtgatc gacatgccgc ccggcaccgg cgacacccag ttgaccatga
     1261 cccagcgcct gccgctgacc ggcgccgtca tcgtctcgac gccgcaggac atcgccctgc
     1321 tcgacgcccg caagggcctc aacatgttcc gcaaggtgga cgtgccggtg ctcggcatca
     1381 tcgagaacat gagctactac gtctgcccca agtgcggcga cgaggcccac atcttcggcc
     1441 atggcggcgc caaggcggaa gccgcccgcc tgtcgaccga gttcctgggc gagatcccgc
     1501 tggacatcgc catccgcgag acctcggacg ctggcgagcc catcgtcatc tccaagccgt
     1561 ccagccccca cgccaaggcc tatcgcgaaa tcgccgccaa gatctgggaa aaggtccagg
     1621 tcatccaggg cagcgccaag aagcccaaga tcagcttcga gtaaattcgg cgcccccttt
     1681 ccctgtggca gggaaagggg gcaaccgccg aaaggaacaa accgtggaca ttcccgcccg
     1741 atccatgcta taaccacggc catcaacacc acagccacgc ccggatcgcc cccgcgaccc
     1801 gggctttttc atgtgcgcgc cccgtcaccc ggcagcggcg tggcggctgt gctggcatgg
     1861 agagatgaca atgatccgtt cgttcttcac caccgcgccc cagccgcgga cgtccggcct
     1921 gggtgccggc ctgtccgccg aggacgacga ccgggttccc gccttccaaa aggcgtggaa
     1981 ggacggcgcc accttcgaag acatgttcgg ccccagcccg ttcagcctgc acggcacggt
     2041 cggcggctcg ggcgccgaca accaccgccc cgacgtcgcc aaggtcgaga cctttctggg
     2101 cgacgccggc tattacaagc cgatgaccaa cgacggcccg gcgggctggc acaacaccaa
     2161 cctcgacacc gccatcaaga gcttccagaa ggaccacggc ctcaaggtcg acggcctgct
     2221 caagcccaac ggccccacca tcggcaagct gggtggcgtg ctgggcggtg gcgcgcagcc
     2281 gcaagcgaag cccgcgtcca tcatgccgat gcccggcgat cccgattacc atccgatcgg
     2341 cggcgtcacg ccccccaagg ccaacccctg gggcagcgcc gagtccgccg accgctggga
     2401 ggccggcaac atggccaagg tgctgctggg ccggtccgac tatcaggacg ccgtcaagca
     2461 cttcgccggc gaattcgccc gcgcccctga caccgccaag ccctacacgg cggccgtcta
     2521 cgacgagatg gccaaggcca accccaaaca ggcaatccac ttcgccagcc agatgaaggc
     2581 ggcggggctg gtggaggaga agccgtccga tggtgccggc agcaatacgc tggtcggtgg
     2641 tgctggcgat gatggcccga agcccgcccc tgagccgcag tcgaaacctg agccgaagcc
     2701 gcaggaaccg gcaccggcgc cgcagaagcc ggagccggca ccggccggtt caggcaagaa
     2761 agacgatctc aaaccgaccg acaaggcggt cgatccaaac gatctttaca agcaactggg
     2821 ggtcatagcg gagcagtccc tgaaaggccc gccaccgggc accccagctc tcgtcaccca
     2881 ggcccgcgac atgtgccgcg atggagatga ggttttcgcg cagcaaccgg aaggcgcgcc
     2941 gggctgtatc tcgtgtttac agcgccatca ccgcagcccc agccgggtca tcatcttcag
     3001 caagcccacg cgcgacacgc cgagccggcg agcggcggcg ctatggttgt tggcggtggc
     3061 ggcaagggcg gcggtgatca ggcggcgttc cagatccgcc agggcttcgg ccagggttga
     3121 cggttgcgcg gtgagggagc cggctggctc gccgctgcgg gcgaagatca ggtcgtccgg
     3181 gccaatggcg ccgtcgccgg cgggatcggc cagggcggcg gcggaggcta ttaccgcctt
     3241 cagctcgcgc acattgccgg gccagtcttg ctcggccagc caggaaaagg cgtccggcgt
     3301 caggcgcaat cggcgggctt tcccggcctc gtccaggaaa cgtgccgcca gcggggcgat
     3361 gtcctcgcgc cgctcg
//
LOCUS       DATIKR010000015         2122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_60797, whole genome shotgun sequence.
ACCESSION   DATIKR010000015 DATIKR010000000
VERSION     DATIKR010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60797"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1371)
                     /locus_tag="VLL76_00215"
     CDS             complement(<1..1371)
                     /locus_tag="VLL76_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HSV27936.1"
                     /translation="MLHINDLVFRFGGRTLFDNATVHVAAGARVGLVGRNGAGKSILF
                     KLILDELHPDGGAIRIRPRARVGRVAQEAPEGDISLIDCVLAADTERAALLAEAEACH
                     DGHRLAEIHERLNAIDAHSAPARAAAILAGLGFDAESQTRAVAEFSGGWRMRVALAAA
                     LFARPELLLLDEPTNHLDLEATLWLQSFLATYPGTLLVISHDRELLNEVCDRIIHLDQ
                     GKLVSYGGNYDSFERVRREKMELQAKAYSKQMEQRRKIQSFIDRFKAKATKARQAQSR
                     VKMLERMEMVGPVIEDRAMTFDFPDPERLSPPIIAIDDGVAGYDGRAVLRNLSVRVDM
                     DDRIALLGANGNGKSTLSKILAGRLALMQGQLHRPPKLKIGYFAQHQTDELVPSNTPF
                     DHMAELMKDAPESKVRAQLGRFGFEQDRADVKVESLSGGEKARLLFALMSRDAPHLMI
                     LDEPTNH"
     gene            1574..1996
                     /gene="ndk"
                     /locus_tag="VLL76_00220"
     CDS             1574..1996
                     /gene="ndk"
                     /locus_tag="VLL76_00220"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSV27937.1"
                     /translation="MATERTLSIIKPDATRRNLTGKINARFEDAGLRIVAQKRVRLTK
                     EQAEGFYGVHRERSFFNDLVKFMISGPVVVQVLEGEGAVAKNREIMGATNPANAAPGT
                     IRADFAESVEANSVHGSDSAENAAIEIAFFFAQSEIVG"
BASE COUNT          335 a          707 c          734 g          346 t
ORIGIN      
        1 gtggttggtg ggctcgtcga ggatcatcag gtggggcgcg tcgcggctca tcagcgcgaa
       61 caaaaggcgc gccttctcgc cgcccgacag gctctcgacc ttgacgtcgg cgcggtcctg
      121 ctcgaagccg aagcggccca actgggcgcg caccttggat tcgggcgcgt ccttcatcag
      181 ttcggccatg tggtcgaagg gggtgttgga cggcaccagc tcgtcggtct ggtgctgggc
      241 gaaatagccg atcttcagct tgggcgggcg gtgcaactgg ccctgcatca gcgccagccg
      301 gccggccagg atcttggaca gggtcgactt gccgttgccg ttggcgccca acagcgcgat
      361 gcggtcgtcc atgtcgacgc gcaccgacag attgcgcagc acggcgcggc cgtcatagcc
      421 ggcgacgccg tcgtcgatgg cgatgatggg cgggctcagg cgctcggggt cggggaagtc
      481 gaaggtcatg gcgcggtcct cgatgaccgg cccgaccatc tccatccgct ccagcatctt
      541 gacccggctt tgcgcctggc gggccttcgt cgccttggcc ttgaagcggt cgatgaagct
      601 ttggatcttg cggcgctgct ccatctgctt ggaataggcc ttggcctgca gctccatctt
      661 ctcgcgccgg acccgctcga agctgtcgta attgccgcca taggacacca gcttgccctg
      721 gtccaggtgg atgatgcggt cgcacacctc gttcagcagc tcgcggtcgt ggctgatcac
      781 cagcagggtg ccgggatagg tggccaggaa cgattgcagc cacaaggtgg cttccaggtc
      841 caggtggttg gtgggttcgt ccagcaaaag cagctcgggc cgggcgaaca gggcggcggc
      901 cagggccacg cgcatgcgcc agccgcccga gaattccgcc accgcccggg tctgggactc
      961 ggcgtcgaag cccaagccgg ccaggatggc ggcggcgcgg gccggggccg aatgggcgtc
     1021 gatggcgttc agacgctcgt ggatctcggc caggcggtgg ccgtcgtggc aggcctcggc
     1081 ctcggccagc agggcggcgc gctcggtgtc ggcggccagc acgcaatcga tcaggctgat
     1141 gtcgccctcg ggcgcctcct gcgccacccg gccgacgcgg gcacgcgggc ggatgcggat
     1201 ggcgccgccg tcggggtgca gctcgtccag gatcagcttg aacaggatcg acttgccggc
     1261 gccattgcgc ccgaccaggc cgacgcgggc ccccgccgcc acgtggacgg tggcgttgtc
     1321 gaacagggtg cggccgccga aacggaagac gaggtcgttg atatgcagca tgggctgggt
     1381 tgttagcacg gcccgcgccc gcgcgcaaag gcctcccccg aaaacagccg attgcccttc
     1441 gagcgtgttg gcggtataac cccgcccgac ccctgtgcgc cggccgccag gggtttaacg
     1501 cgtgcgcagc cgttctggct ggagtgatct cggacggcgc gcgcggccac ccgccgaaaa
     1561 ggaattcgac caaatggcta ccgaacgcac cctgtcgatc atcaagccgg acgccacccg
     1621 ccgcaacctg acgggcaaga tcaacgcccg tttcgaggat gccggcctgc gcatcgtcgc
     1681 ccagaagcgc gtccgcctga ccaaggaaca ggccgagggc ttctacggcg tccatcgcga
     1741 gcgctcgttc ttcaacgacc tcgtcaagtt catgatctcc ggcccggtgg tcgtgcaggt
     1801 cctggaaggc gagggcgcgg tcgccaagaa ccgtgagatc atgggcgcca ccaacccggc
     1861 caacgccgcc cccggcacca tccgcgccga tttcgccgag tcggtggaag ccaactcggt
     1921 gcacggttcg gactcggccg agaacgccgc catcgagatc gccttcttct tcgcccagag
     1981 cgaaatcgtc ggctgatccc gaattcgggc gaccgaacgg aaaaaccccg gagcctctcg
     2041 gccccggggt tttttgttgg tgcattgcag atagcgggac gccggcctgc cgctcaggcc
     2101 ctaaagcacc gtcatggccg gg
//
LOCUS       DATIKR010000016         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_205973, whole genome shotgun sequence.
ACCESSION   DATIKR010000016 DATIKR010000000
VERSION     DATIKR010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205973"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VLL76_00225"
     CDS             complement(<1..398)
                     /locus_tag="VLL76_00225"
                     /inference="COORDINATES: protein motif:HMM:NF028468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE3 domain-containing protein"
                     /protein_id="HSV27938.1"
                     /translation="MKGYAGITLAPGAILAFVVLVVGLYAVSAQNFLIFHTVAELFAI
                     VVAFTAFGVAWYSRTWIGANFLLMLGIGHLFVAMIDVAHTVVYKGSGLVPYSSAGLST
                     QFWIAGRVIEAAAYLIAVSRPTARFAVPPV"
     gene            complement(560..1186)
                     /locus_tag="VLL76_00230"
     CDS             complement(560..1186)
                     /locus_tag="VLL76_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV27939.1"
                     /translation="MIRILIAEDQQLVRQGLAALLKTGDIEIVGEAEDGEAAIEMTRA
                     LKPEIVLMDLSMPTLDGVEATRRIKRASPQVRVLILTVANCERRVAEALAAGADGYAL
                     KKLGHDELMAAINAVRSGKTYLGPGLNEEMVREHLDGGDATMAALTGREREVLRLIAQ
                     GLKNREIAETLSIAIKTVETHRTKIMQKLDLHNSAELATYAIRRGLIE"
     gene            complement(1258..1863)
                     /locus_tag="VLL76_00235"
     CDS             complement(1258..1863)
                     /locus_tag="VLL76_00235"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV27940.1"
                     /translation="MQWGANIRRLRAARGWKQVVLAEMLGVDQATVSRWERGLQRPDV
                     TTQMKLRDMLRANLPEIDRVALAAIQQSPHLALAFDRALRLVAVSEAVAARAGRDAAD
                     LVGGELCAPMAPDLAWATEQAERAGFWAGEVAAMRLVARAPLAGGAPLHARYVWSPLF
                     LAGGEVVAAVQCREIERAEYLAALRGERLTVIPLHPLAIAS"
BASE COUNT          393 a          730 c          620 g          336 t
ORIGIN      
        1 aacaccggcg gcacggcgaa gcgcgccgtg gggcgcgaca ccgcgatcag ataggcggcg
       61 gcttcgatga cccgcccggc gatccagaat tgggtggaca gcccggcgct gctgtagggg
      121 acaaggccgg agcccttgta gaccacggta tgggcgacgt cgatcatcgc cacgaacaaa
      181 tggccgatgc ccagcatcaa caggaagttg gcgccaatcc aagtgcgcga ataccacgcc
      241 acgccaaagg cggtaaacgc cactacgatg gcgaacagct cggcgacggt atggaagatc
      301 aggaaattct gcgcgcttac ggcatacagc ccgaccacca gcacgacgaa cgccaagatg
      361 gcgcccggtg ccagcgtgat cccagcatat cccttcatcg ccggccagcc ggtgcgttac
      421 ggctgctcga ttgcgcgtga ataatgcgtc cccccactct tccccccgga taaattcatt
      481 ttcatccgta agcttcgctc aacccaatgg cgagggaaag aaacccttgg aacgagggga
      541 atcgtccata ggaactagtc tactcgatca agccccgacg aatcgcataa gtggccaatt
      601 cggcggaatt gtgcaggtcc agcttctgca tgatcttggt gcggtgggtt tccaccgtct
      661 tgatggcgat ggacagggtc tcggcgattt cgcgattctt cagtccctgg gcgatcaggc
      721 gcagcacctc gcgctcgcgg ccggtcaggg cggccatggt ggcgtcgccc ccatccagat
      781 gttcgcgcac catctcttcg ttgaggccag ggccgagata ggtcttgccc gagcgcaccg
      841 cgttgatggc ggccatcaat tcgtcgtggc ccagcttctt gagcgcgtag ccgtcggcgc
      901 cggcggccaa ggcctcggcg acgcggcgct cgcaattggc caccgtcagg atcagcacgc
      961 gcacctgcgg cgacgcccgc ttgatccggc gggtcgcctc gacgccgtcc agcgtcggca
     1021 tggaaaggtc catcaggacg atctcgggct tcagcgcccg cgtcatctcg atggcggcct
     1081 caccgtcctc ggcctcgccg acgatctcga tatccccggt cttgagcagc gcggccaagc
     1141 cctggcggac caattgctgg tcctcggcga tcagaatgcg gatcaaaacc ctatcctcct
     1201 tatgccgagg ggatcatcgc cgacttatgc gcgcacatca agattgcaag taaacaatca
     1261 ggacgcgatt gccaaaggat ggaggggaat cacggtcagg cgctcgccgc gcagggcggc
     1321 aagatactcg gcgcgctcga tctcgcggca ctggaccgcg gccaccacct cgcccccggc
     1381 caggaacagc gggctccaga cgtaacgggc gtgcagcggc gcccctccgg ccaacggcgc
     1441 acgcgccacc agccgcatgg ccgccacctc gccggcccag aagccggcgc gctccgcctg
     1501 ctccgtcgcc caggcaaggt cgggagccat gggggcgcac agctcgcccc ccaccaggtc
     1561 ggccgcatcg cgccccgccc ttgccgccac cgcctcggac accgccacca ggcgcagggc
     1621 acggtcgaac gccaatgcca gatgcggcga ttgctggatc gccgccaagg ccactcggtc
     1681 gatttcgggc aggttggcgc gcagcatgtc gcgcaatttc atctgcgtgg tgacgtccgg
     1741 ccgttgcagg ccgcgttccc agcgcgacac cgtcgcctga tcgacgccca gcatttccgc
     1801 cagcaccacc tgtttccagc cccgcgccgc gcgcagccgc cggatgttcg caccccattg
     1861 catgaccagc cccaatcccc atgcgcataa atgcgccctt gcgcgaaaca ctatcgcact
     1921 atgaactgac ctatacaaat aggcgcaacg tatggatagc tcaccacatc cgcgtacatc
     1981 ctaggtatta cccccatctt gcgcgcgcac ccatagccca accccttgcg cgcgcgagag
     2041 gcacgccccg cttgtctcca ggcggggcgt gcgctttta
//
LOCUS       DATIKR010000017         2201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_205983, whole genome shotgun sequence.
ACCESSION   DATIKR010000017 DATIKR010000000
VERSION     DATIKR010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205983"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VLL76_00240"
     CDS             complement(<1..385)
                     /locus_tag="VLL76_00240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27941.1"
                     /translation="MRRLAVLALILLLSACGPRLVQTDVTRFHQLPDPVAGRSFTILP
                     DPSQRGSLEFERYAELAAAQMVQAGWRPVPSSQPADAVVFLHWGVSEPRTVTWSSPSS
                     VYGGMGWGRSSRWYGGGVGFPLGDPF"
     gene            complement(416..2122)
                     /locus_tag="VLL76_00245"
     CDS             complement(416..2122)
                     /locus_tag="VLL76_00245"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HSV27942.1"
                     /translation="MMSGIAGFLDSGVGSQAAWCDGAAGIGLDGAVAASRDGRWVAAL
                     DGTLYNRADLRRRLDPVEWAGRDDAETLVEAVARWGIERALQALDGQFAIALWDRLER
                     VLHLARDPMGERTLYWARCGGGLRFASRLGALTADSAFDAAIDRDAVATYLRLGHVPA
                     PFTIHRHARKVVAGTILTLKGGDDSVRPFWDAAERARAVAGGFTGGPAAAAERLNLLL
                     RASVSLRLEAEPVVGVILTGDAQSALAAAVARALGTPRLSSVSLAADGDDPAAAVARV
                     LETDHHAIAPTDDDLRAILPDLAAAWDEPFADPAMPAAVLTARLAARHMKVALAGTGA
                     EILMGCDPLYRLLPEEWARRNASPSWLRRLEHLVGRAPAAAPSQAALLGLHRSLWRGL
                     PDPVPGAKGVPTPFDRDPGVADPVLAAMVTDCLASLPDRRLALAGGAAMAQGIELRSP
                     FLDPAMVELAWSLPTADPLDEAGCPACLRDVLCRYLPPEALPAGPAPEAPLARWLDGP
                     LAEWAGDLLSEARLKRRGLIDPAAMARCRREAAKGQDRTGEIWAVLMLEAWAEAATHP
                     IL"
BASE COUNT          314 a          800 c          844 g          243 t
ORIGIN      
        1 ggaaggggtc gcccagcggg aagccgacac cgccgccgta ccagcgcgaa gaacggcccc
       61 agcccatgcc gccatagacc gaggacgggc tcgaccacgt caccgtgcgc ggctcggaca
      121 cgccccaatg caggaacacc accgcgtcgg ccggctgcga cgacggcacc ggccgccacc
      181 cggcctggac catctgggcg gcggccagtt cggcatagcg ctcgaactcc aggctgccgc
      241 gctggctggg gtcgggcagg atggtgaagc tgcggccggc gaccgggtcg ggcagttggt
      301 ggaagcgggt gacgtcggtc tgcaccaatc gcggcccgca ggccgacagc agcaggatca
      361 gggcaaggac ggccaggcgc ctcatggcgg tcaccgcgaa atggacaatg cctgcctata
      421 agatggggtg cgtcgccgct tccgcccagg cctccagcat cagcacggcc cagatctcgc
      481 cggtgcggtc ttggcccttg gcggcctcgc ggcggcaacg ggccattgcg gcggggtcga
      541 tcaggccgcg ccgcttcagc cgcgcctcgg acagcaggtc gccggcccat tccgccagcg
      601 ggccgtccag ccagcgcgcc agcggcgcct cgggcgcggg gccggcgggc aaagcttcgg
      661 gcggcaggta gcggcacagc acgtcgcgca ggcaggcggg acagccggcc tcgtccagcg
      721 ggtcggccgt gggcaggctc caggctaact ccaccatggc ggggtcgagg aagggcgagc
      781 gcagctcgat tccctgggcc atggcggcgc caccggccaa ggccagtcgg cggtcgggca
      841 ggctggccag gcaatcggtg accatggcgg ccagcaccgg atcggcgacg ccgggatcgc
      901 ggtcgaacgg cgtcggcacc cccttcgccc ccggcaccgg atcgggcagg ccgcgccaaa
      961 gcgagcggtg caggcccagc agcgccgcct gggacggggc ggcggccggg gcgcggccga
     1021 ccagatgttc cagccgccgc agccaggacg ggctggcatt gcgccgcgcc cattcctcgg
     1081 gcagcaggcg atacagcgga tcgcagccca tcaggatctc ggcgccggtg ccggccagcg
     1141 ccaccttcat gtggcgggcc gccagccggg ctgtcagcac cgccgcgggc atggcgggat
     1201 cggcgaaggg ttcgtcccag gccgcggcca ggtcgggcag gatggcgcgg aggtcgtcgt
     1261 cggtgggggc gatggcgtgg tgatcggtct ccagcacccg cgccacggcc gccgccgggt
     1321 cgtcgccatc ggcggccagc gacaccgaac tcaggcgcgg cgtgcccagc gcgcgggcga
     1381 cggcggcggc cagggccgat tgcgcgtcgc cggtcaggat gacgcccacc accggctcgg
     1441 cctccagccg cagcgacacc gaggcgcgca gcagcaggtt caggcgctcg gcggcggcgg
     1501 cggggccgcc ggtgaagccg ccggcgacgg cgcgggcgcg ctcggccgcg tcccagaacg
     1561 gccgcacgct gtcgtcgccg cccttgaggg tcaggatggt gccggccacc accttgcggg
     1621 cgtggcggtg gatggtgaag ggcgccggca cgtggcccag ccgcagatag gtcgccacgg
     1681 cgtcgcggtc gatggcggcg tcgaaggcgg aatcggcggt cagcgccccg aggcgcgagg
     1741 cgaaccgcag cccgccgccg catcgcgccc agtacagggt gcgttcgccc atggggtcac
     1801 gggccagatg cagcacgcgc tccagccggt cccacagggc gatggcgaat tggccgtcca
     1861 gcgcctgcag ggcgcgctcg atgccccagc gggcgaccgc ctcgaccagg gtctcggcat
     1921 cgtcacggcc ggcccattcc accgggtcga gccggcggcg caaatcggcg cggttataga
     1981 gggtgccgtc gagggcggcg acccagcggc cgtcgcgcga ggcggcgacg gcgccgtcaa
     2041 ggccgatgcc ggccgcgccg tcgcaccatg ccgcttgcga gccgacccca ctgtcgagaa
     2101 atccggcgat gccgctcatc atcccttagc cccttttccc gtcccccgac agtagcgggc
     2161 ggcccttggt gcggcaaggg cgtccaaccc tagtggccgc c
//
LOCUS       DATIKR010000018         4539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_97069, whole genome shotgun sequence.
ACCESSION   DATIKR010000018 DATIKR010000000
VERSION     DATIKR010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4539
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97069"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..730)
                     /locus_tag="VLL76_00250"
     CDS             complement(218..730)
                     /locus_tag="VLL76_00250"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011140927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSV27943.1"
                     /translation="MQPPGHTIRMIPEGDDRERLVCGTCGFVHYENPKVIVGAVCTWE
                     GKYLLCRRGIEPRLGYWTMPVGYMELHETTEQGALREVWEEAQARAEIDALLAIYSIP
                     EISQVHMIYRARMTGPDFAAGTESLEVRLFDWDEIPWDDLAYPNVRWSLEYDREMRGR
                     ACFPPRGRPG"
     gene            complement(784..1029)
                     /locus_tag="VLL76_00255"
     CDS             complement(784..1029)
                     /locus_tag="VLL76_00255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27944.1"
                     /translation="MANDIKIGGSATGGIDALKEALGLNPRGGGAAVTSSSSGASSSA
                     GGRGGYGPRGMRMLPADVPVESLDRNAAPGTYIDILI"
     gene            1172..1507
                     /locus_tag="VLL76_00260"
     CDS             1172..1507
                     /locus_tag="VLL76_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012636952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HSV27945.1"
                     /translation="MPEINVQGRAIQVSEAGWLEDTREWDEEIAKVIAENEGVTLTPE
                     HWDVIREARAYFDEYGIVAEQRVFMKLLKEKYGADRATQQYLYSLFPHGPLKQGNKIA
                     GLPRPKGCS"
     gene            1595..2425
                     /locus_tag="VLL76_00265"
     CDS             1595..2425
                     /locus_tag="VLL76_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27946.1"
                     /translation="MDTTFDPPAAPVSRPSDLASHFKECGTLNTNLTLAPGERMVITD
                     DLLNGTVPDLAAMSMAAIVARDGMVARAALLPLGVAASKVDPAKRHKYEQLFALIEET
                     AFDEHTRENAEALIHARFRESQIKELANELGGTVGPARQRYRDFLDVVKKLTAKKISQ
                     ALFLDEFLEFTRTVAGKLDFGIYSMCVDRLFTSERIPITVKVSLLKEVVKYPPLVRRE
                     LLTNLLSSPAAAPELVRYARQELAEFMSHDQLTEIFLFTTLKLAWQAQREAPRNRLSL
                     "
     gene            complement(2530..3519)
                     /locus_tag="VLL76_00270"
     CDS             complement(2530..3519)
                     /locus_tag="VLL76_00270"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSV27947.1"
                     /translation="MTVQTLTVTPDEADIRLDRWFRRHYPEVGHGLLEKWLRTGQVRV
                     EGKRAKSNQRLEPGQQVRVPPIPTGDAPKPEAKRPVVDAATAKMLKDAVLYMDDDVIV
                     LNKPPGLATQGGTGMGDKHLDAMLDALTFDKPDRPRLVHRLDKDTSGVLLLGRTAGAA
                     AKLAAAFKSREAKKLYWALVVGVPKIRRGRIDAPLAKLTGKMGDKVAVDEDDGKRAVT
                     WYRVVDNALRKTAWLEMEPRTGRTHQLRVHCALLTTPILGDGKYGGQDAFIAGTGISR
                     KLHLHSRAIRMPHPKGGVLQVVAPLPEHMAKSFDFFGFDEATAGKPFEAFEED"
     gene            complement(3542..>4539)
                     /locus_tag="VLL76_00275"
     CDS             complement(3542..>4539)
                     /locus_tag="VLL76_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002963548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HSV27948.1"
                     /translation="REETDDGWGALESLDALKTNMHVEKPRTIVTRNESPDISFDRSI
                     NPYRGCEHGCIYCFARPSHAWLGLSPGLDFETRLLAKPDAPRLLEAELRHPRYRPAVI
                     AIGTNTDPYQPIERERRIMRGCLEVLSAFNHPVMITTKGAMVTRDIDILAPMAAKRQA
                     MVGISVTTLDRDLCRTLEPRASTPRSRLDAIRRLSEAGIPVAVMVAPVIPFVTDHELE
                     RILEAAREAGAVAAHYILLRLPYEVKDLFAEWLETHVPGKAAHVLSLVAQSRGGKLYD
                     ATHGRRFTGTGANADLLAQRFKVACKRLVFGPRDVALDTSRFQPPPKAGDQLALF"
BASE COUNT          749 a         1470 c         1547 g          773 t
ORIGIN      
        1 cgcgagccgg ggtccatgac ggggcacccg aatggatccc gggtctcgcg atgctcgccc
       61 gggatgacgg ctgaagcaaa tgccgccccg cgcatttcac tagcccacag atgaacagag
      121 atgcccgctg cgcgggctac acagatggat catcggtgtt tatctgtgtt catctgtggg
      181 caattgacgc gttggcattc cgagcgtggg caactcctca gcccggccgg cccctgggcg
      241 ggaagcaggc gcggccgcgc atttcgcggt cgtattccag cgaccatcgc acattgggat
      301 aggccaggtc gtcccacggg atttcatccc agtcgaacag ccgcacctcc aggctttcgg
      361 tgccggcggc gaagtccggc ccggtcatgc gggcgcggta gatcatgtgg acctggctga
      421 tctcggggat ggaatagatc gccagcaggg cgtcgatctc ggcgcgggcc tgggcttcct
      481 cccacacctc gcgcagggcg ccctgctcgg tggtctcgtg cagttccata tagccgaccg
      541 gcatggtcca atagcccagg cgcggctcga tgccgcgccg gcacagcagg tacttgccct
      601 cccaggtgca cacggccccc acgatgacct tgggattttc gtaatggacg aagccgcagg
      661 tgccgcagac gagccgctcg cggtcgtcgc cttcggggat catgcggatg gtgtggccgg
      721 gtggctgcat cggcgaagtt tggacaaccg tcgcccgaca ggcaagcccg aacagggcca
      781 ggatcagatc agaatgtcga tataggtccc gggcgccgcg ttgcggtcca ggctttccac
      841 cggcacgtcg gcgggcagca tgcgcatgcc gcgcgggcca tagccgccgc ggccgccggc
      901 cgaggacgag gcgccggacg acgacgaagt cacggccgca ccgccgccgc gcgggttgag
      961 ccccagcgct tccttgagtg cgtcgatgcc gccggtcgcg gatccgccga tcttgatgtc
     1021 gttcgccata ggccgactct agcacgacgg cagagtcgct gtcaccgccc ggcgacatag
     1081 tccattggat agaaaatttc caattcgcat tgacgcggac cgtttggtct ccccatatat
     1141 caccagaggc taattcacgg agaccgcatc gatgcctgag atcaacgtcc agggccgcgc
     1201 cattcaggtc agcgaggccg gctggctgga agacacccgc gagtgggacg aggaaatcgc
     1261 caaggtgatc gccgagaacg aaggcgtgac cctgaccccc gaacattggg acgtgatccg
     1321 cgaggcccgc gcctatttcg acgaatacgg catcgtcgcc gaacagcgcg tcttcatgaa
     1381 gttgctgaag gaaaagtacg gcgccgaccg tgccacccag caatacctgt attcgctgtt
     1441 cccgcacggc ccgctgaagc agggcaacaa gatcgccggc ctgccccgcc cgaagggctg
     1501 ttcgtaaccc tcccttcggc caaggtctgg gggtaagggt acgggttcct ctgtaacctt
     1561 gcccccgagt ccggcttaag gtctaatggc cggcatggat accaccttcg atcctccggc
     1621 cgctccggtc tcgcgtccca gcgaccttgc ctcgcacttc aaggagtgcg gcacgctgaa
     1681 cacgaacctg accctggcgc cgggcgagcg catggtcatc accgacgacc tgctgaacgg
     1741 caccgtgccc gatctggccg ccatgtccat ggccgccatc gtggcgcggg acggcatggt
     1801 ggcgcgggcg gcgctgctgc ctttgggcgt cgccgccagc aaggtggacc cggccaagcg
     1861 ccacaaatac gaacaactgt tcgccctgat cgaagaaacc gccttcgacg agcatacccg
     1921 cgagaacgcc gaggcgctga tccacgcccg tttccgcgaa tcgcagatca aggaactggc
     1981 caacgaactg ggcggcaccg tcggcccggc gcgccagcgc tatcgcgact tcctcgacgt
     2041 ggtcaagaag ctgaccgcca agaagatctc gcaggcgctg ttcctggatg aattcctgga
     2101 attcacccgc accgtcgccg gcaagctgga tttcggcatc tattccatgt gcgtcgaccg
     2161 cctgttcacc agcgagcgca ttcccatcac ggtcaaggtg tcgctgctca aggaggtggt
     2221 gaaatacccg ccgctggtgc ggcgcgaatt gctgaccaac cttctgtcgt cgccggcggc
     2281 ggcgccggaa ctggtgcgct atgcccgcca ggaactggcc gagttcatga gccacgacca
     2341 gttgaccgag atcttcctgt tcaccacgct gaaactggcg tggcaggccc agcgcgaagc
     2401 gccgcgaaac cgcttgtcac tctgaggcgc ggccgaagag tctttcaggc acgagcggca
     2461 gccgcctcgg gtgaaagatc cttcgctggc gctcaggatg acattggaca tattcaatcc
     2521 gcgacgcgct tagtcctctt cgaacgcctc gaacggcttg ccggcggtcg cttcgtcgaa
     2581 gccgaagaag tcgaagcttt tcgccatgtg ctcgggcagc ggcgccacca cctgcagcac
     2641 gccgcctttg gggtgcggca tgcggatggc gcgcgaatgc aggtgcagct tgcggctgat
     2701 gccggtgccg gcgatgaacg cgtcctggcc gccatacttg ccgtcgccca ggatgggcgt
     2761 ggtcagcagg gcgcaatgga cgcgcaattg gtgggtgcga ccggtgcgtg gttccatctc
     2821 gagccaggcg gtcttgcgca gcgcgttgtc caccacccgg taccaggtga cggcgcgctt
     2881 gccgtcgtcc tcgtccaccg cgaccttgtc gcccatcttg ccggtcagct tggccagcgg
     2941 cgcgtcgatg cggccgcgcc ggatcttcgg cacgccgacg accagcgccc aatacagctt
     3001 cttggcctcg cgcgacttga aggcggcggc cagcttggcg gcggccccgg cggtgcggcc
     3061 cagcagcagc acgcccgaag tgtccttgtc gaggcggtgg accaggcggg ggcggtcggg
     3121 tttgtcgaag gtcagggcgt ccagcatggc gtcgaggtgc ttgtcgccca tgccggtgcc
     3181 gccctgggtc gccaagcccg gcggcttgtt cagcacgatg acgtcgtcgt ccatgtaaag
     3241 gacggcgtcc ttcagcatct tggcggtggc ggcgtccacc accggccgct tggcctcggg
     3301 cttgggcgcg tcgccggtgg ggatgggggg gacacggacc tgttggcccg gctccagccg
     3361 ctggttggat ttggcgcgct tgccctcgac ccgcacctgg ccggtgcgca gccacttttc
     3421 cagcaggccg tggccgacct cggggtaatg gcggcggaac cagcggtcga ggcggatgtc
     3481 ggcttcgtcg ggggtgacgg tgagggtctg gacagtcatg agggggtatt tagcacacag
     3541 atcagaatag ggccaactga tcgcccgcct tgggcggcgg ctggaaccgg ctggtgtcca
     3601 aagccacgtc gcgcgggccg aagaccaggc gcttgcaagc gaccttgaaa cgttgcgcca
     3661 aaaggtcggc attggcgccg gtgccggtga agcggcggcc gtgggtggca tcgtacagct
     3721 tgccgccgcg cgactgcgcc accagcgaca gcacgtgggc ggccttgccc ggcacatgcg
     3781 tctccagcca ttcggcgaac aggtccttca cctcgtaggg caggcgcagc aggatgtaat
     3841 gggcggcgac ggcgccggcc tcgcgcgccg cttccaggat gcgctccaac tcgtggtcgg
     3901 tgacgaaggg gatgacgggg gcgaccatca ccgccaccgg gatgccggct tcggacaggc
     3961 ggcggatggc gtcgaggcgc gagcgcggcg tcgaggcgcg cggctccagc gtgcggcaca
     4021 aatcgcggtc cagcgtggtg acgctgatcc ccaccatcgc ctgccttttg gccgccatgg
     4081 gcgccaggat gtcgatgtcg cgcgtcacca tggcgccctt ggtggtgatc atgaccggat
     4141 ggttgaaggc ggacagcacc tcgaggcagc cgcgcatgat gcggcgttcg cgctcgatcg
     4201 gctggtaggg gtcggtgttg gtgccgatgg cgatcaccgc cgggcgatag cggggatggc
     4261 gcaattccgc ctccagcagg cggggcgcgt cgggcttggc cagcaggcgg gtctcgaaat
     4321 cgaggccggg cgacaggccc agccaggcgt ggctgggccg cgcgaagcaa tagatgcagc
     4381 cgtgctcgca gccgcgatag ggattgatcg agcggtcgaa ggagatgtcg ggcgattcgt
     4441 ttcgcgtcac gatcgtccgc ggcttttcga catgcatgtt ggtcttcagc gcgtcgaggc
     4501 tttcgagcgc gccccagccg tcgtcggtct cctcgcggc
//
LOCUS       DATIKR010000019         2815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_193836, whole genome shotgun sequence.
ACCESSION   DATIKR010000019 DATIKR010000000
VERSION     DATIKR010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193836"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /gene="rplI"
                     /locus_tag="VLL76_00280"
     CDS             complement(<1..470)
                     /gene="rplI"
                     /locus_tag="VLL76_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HSV27949.1"
                     /translation="MEVILLERIEKLGQMGEVVKVKPGYARNFLLPQKKALRANKDNL
                     AFFEKQRVQLEALNLKRKEEAEGVASKMDGLKVLMVRQAGEGGQLYGSVSGRDVADAI
                     KAAGFTVERRQVNLDNPIKTLGAYPVRVSLHPEVAVTVVVTVARSQEEAERAAAA"
     gene            complement(472..1407)
                     /locus_tag="VLL76_00285"
     CDS             complement(472..1407)
                     /locus_tag="VLL76_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HSV27950.1"
                     /translation="MTRNLSLTLAAGLLSALLYLSVEKGLSLALLSYLSPLPLMMAGL
                     ALGGGAVIAGGLVGAVAVAMVAGYAAASFLVVAALPALLVASRALLWRTLPDGSTEWY
                     PPGLVLGWLTAAGLLLLLIIGVGLSFGNPDGFEAWVAHVIDRMLEAVAPEAPIEQRQQ
                     AVRFWQRISPGTILGSWVAVAAINAVGAQRLLVRLGQNRRPSPVYRELWLPDWLGLVL
                     VVTAAVAMLVGGDVGYVAGGLAIVTLVPFAFLGLAVIHGWVAGRPNARVVLAVTYGLL
                     ILASGLAVVAVAGLGLVRFWTMRFRRGDSGGGMEG"
     gene            complement(1428..1691)
                     /gene="rpsR"
                     /locus_tag="VLL76_00290"
     CDS             complement(1428..1691)
                     /gene="rpsR"
                     /locus_tag="VLL76_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HSV27951.1"
                     /translation="MTEVKTDRPRPAAARRPFFRRRKTCPFSGANAPKIDYKDIKLLS
                     RFISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLLPYVVK"
     gene            complement(1691..2092)
                     /gene="rpsF"
                     /locus_tag="VLL76_00295"
     CDS             complement(1691..2092)
                     /gene="rpsF"
                     /locus_tag="VLL76_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HSV27952.1"
                     /translation="MALYECVILTRQEVSAPQVEALTDEMANVLTQGGGSVSKKEYWG
                     LRNLAYRMKKNRKAHYVLMNIDAPSAAVKEMERQMSINEDVIRVLTIRVDELEEGPSA
                     MMQAKSSRDDRPRREDRGDRPERPRRSEGGE"
     gene            complement(2231..>2815)
                     /locus_tag="VLL76_00300"
     CDS             complement(2231..>2815)
                     /locus_tag="VLL76_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV27953.1"
                     /translation="QADTSTTRRFGGTGLGLAICKQLVGLMGGSIGVDSAPGRGSTFW
                     FELAYAQGEKPAETEPDAAAVLRPLRVLLAEDNPVNQKVARILLERQGHTVTLAVNGA
                     EALRMAAAEEFDVVLMDMQMPEMDGLEATRRIRALDGPSAGVPIVALTANAMKGDDER
                     CLAAGMDAHVPKPIRPEQLFATIARALGRGAATG"
BASE COUNT          486 a          988 c          903 g          438 t
ORIGIN      
        1 gcagcggcgg cgcgctcggc ctcttcctgc gaacgggcca cggtcacgac cacggtcacg
       61 gccacctcgg ggtggagcga cacgcgcacc ggataggcgc ccagggtctt gatcgggttg
      121 tccaggttga cctggcggcg ctcgacggtg aagccggcgg ccttgatggc gtcggcgacg
      181 tcgcggcccg acaccgaacc gtacaactga ccgccttcac cggcctgacg aaccatcagg
      241 accttgaggc cgtccatctt ggacgcaacg ccctcggcct cttccttgcg cttcaggttc
      301 agcgcttcca gctggacgcg ctgcttctcg aagaacgcca ggttgtcctt gttggcgcgc
      361 agagccttct tctgcggcaa caggaaattg cgggcgtagc caggcttgac cttgaccact
      421 tcgcccatct gaccgagctt ctcgatcctc tcgagcagaa tgacttccat tttatccctc
      481 cataccgccg ccgctgtcgc cgcggcggaa tctcatcgtc cagaacctca ccagccccag
      541 cccggcgacg gcgaccaccg ccaaaccaga ggccaggatc agcaacccgt acgtcaccgc
      601 gaggaccacc ctcgcattag gcctgcccgc gacccagccg tggatgacgg ccaaccccag
      661 aaaggcgaac ggcaccagcg tcacgatggc caggccgccg gcgacgtaac ccacgtcgcc
      721 accgaccagc atcgccaccg cagcggtgac caccaaaacc agccccagcc aatcggggag
      781 ccacagctcc cgatagaccg gagacggccg gcggttttgc cccaagcgga ccaggagcct
      841 ttgggccccg acggcgttga tcgccgccac cgccacccac gacccaagga tcgtgcccgg
      901 cgatatccgc tgccagaacc gcaccgcctg ttggcgttgc tcgatggggg cttcgggggc
      961 caccgcttcg agcatgcggt cgatgacatg ggctacccac gcctcgaacc cgtccgggtt
     1021 cccgaaactg aggcccaccc cgatgatcag gaggagcaac agtccggcgg cagtcagcca
     1081 acctagcacc aggcccggcg ggtaccactc ggtggaaccg tcgggcaggg tgcgccacaa
     1141 caaggcccgg ctggcgacca gcaaggccgg aagagccgcg acgaccagga aagaggcggc
     1201 ggcgtatccc gccaccatgg ccaccgcgac ggctccgacc aatccccccg cgatcaccgc
     1261 cccacctccc agcgccagac ccgccatcat cagcggcagg ggcgagaggt aggacagcag
     1321 ggcgagggac aacccctttt cgaccgacag gtagagcagg gccgaaagca gtcctgccgc
     1381 cagggtgagg gagaggttgc gggtcaccgt ctgcctaagg gcgttcctta cttcaccacg
     1441 tacggcagca ggcccaggaa gcgggcgcgc ttgatggcct gggccagctc acgctgcttc
     1501 ttggccgaca ccgcggtgat gcggctcggg acgatcttgc cgcgctccga gatgaagcgg
     1561 gagagcagct tgatgtcctt gtagtcgatc ttcggcgcgt tggcgcccga gaacgggcag
     1621 gtcttccggc ggcggaagaa cggacggcgg gcggccgcgg gacgcggacg atcggtcttg
     1681 acttcggtca tcactcaccc ccctcggaac gacgcggacg ctcgggacga tcgccgcggt
     1741 cttcacgacg cggacggtca tcgcggctcg acttggcctg catcatggcc gacggaccct
     1801 cttccagctc atccacgcgg atggtcagga cgcggatcac gtcttcgttg atgctcatct
     1861 ggcgctccat ttccttcacg gcggcggaag gggcgtcgat gttcatgagc acatagtggg
     1921 ccttccggtt cttcttcatc cggtaggcca ggttgcgcag gccccagtac tccttcttgg
     1981 agaccgagcc gccaccctgg gtgaggacat tcgccatctc atcggtcagg gcttcgacct
     2041 gcggggccga aacttcctga cgcgtgagga tcacgcattc gtacaaagcc attccagttc
     2101 ccttctggct tatctcatcc ccggtctcca ccacggaaac caaggcatag ccgaaccgcc
     2161 tcgcggcacg gcaagggtag agaagcggcg gactatacac gaaaagccgg tcgatgcaag
     2221 cgtccggcaa tcagccggtg gcggcgcccc ggccgagcgc gcgggcgatg gtcgcgaaca
     2281 attgctcggg ccggatcggc ttgggcacgt gggcgtccat gccggcggcc aggcagcgtt
     2341 cgtcgtcgcc cttcatggca ttggcggtca gtgcgacgat ggggactccg gcggacgggc
     2401 cgtccagcgc acggatgcgc cgggtggcct ccagcccgtc catctcgggc atctgcatgt
     2461 ccatcagcac cacgtcgaat tcctcggccg ccgccatgcg cagggcctcg gcgccgttga
     2521 ccgccagggt gacggtgtgg ccctggcgtt ccagcaggat gcgggcgacc ttctggttga
     2581 ccggattgtc ctcggccagc agcacccgca gcgggcgcag cacggcggcg gcgtcgggtt
     2641 cggtctcggc cggcttttcg ccctgggcgt aggccagttc gaaccagaag gtgctgcctc
     2701 ggccgggagc gctgtcgacg ccgatgctgc cgcccatcag cccgaccagc tgcttgcaga
     2761 tcgcgagccc caggcccgtg ccgccgaaac ggcgcgtcgt cgatgtgtcg gcctg
//
LOCUS       DATIKR010000020         3702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_145575, whole genome shotgun sequence.
ACCESSION   DATIKR010000020 DATIKR010000000
VERSION     DATIKR010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3702
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145575"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..1624
                     /gene="ffh"
                     /locus_tag="VLL76_00305"
     CDS             248..1624
                     /gene="ffh"
                     /locus_tag="VLL76_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HSV27954.1"
                     /translation="MFESLSQRLTTVFGKLTGRGALSEADVTEALREVRVALLEADVA
                     LPVVKDFVARVKDRAVGAEVVKSVSPGQMVVKIVHDELVATLGTEGVALNLNAVPPAV
                     ILMVGLQGSGKTTTSGKLAVRLKKERKKVLLASLDVYRPAAQQQLEILAKQAEVGSLP
                     IVMGEMPVAITRRALDTGRKEGYDVVILDTAGRLHIDQELMAEVAQVRDVANPVETLL
                     VTDAMTGQDAVTLAREFNEKVGVTGIVLTRVDGDARGGAALSMRHVTGRPIKFLGQGE
                     KLDALEVFHPDRIAGRILGMGDVVSLVEKAIEHVDQEEAEKLAKRMEKGKFDLNDMLS
                     QFKQVEKMGDLKGIIGMLPGIGKMAGALKDANIDNKLLGRQKAIIQAMTPAERRNPDL
                     IKASRKRRIAVGSGVSVQDVNKLLKQYEQMAAVMKKVGKLGQKGLMRHGLGGLMPPGF
                     GGGKGFGR"
     gene            1792..2166
                     /gene="rpsP"
                     /locus_tag="VLL76_00310"
     CDS             1792..2166
                     /gene="rpsP"
                     /locus_tag="VLL76_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HSV27955.1"
                     /translation="MALKIRLARSGAKKRPFYRIVVADARCPRDGRFIEKVGTYNPLL
                     PHDHAERLTLNEERVKHWLGNGAQPTDRLVRIFADKGLVKAPVRAEQSKQPQPKAKAQ
                     QRAKEAAERAAAAAAEGEAAAE"
     gene            2173..2715
                     /gene="rimM"
                     /locus_tag="VLL76_00315"
     CDS             2173..2715
                     /gene="rimM"
                     /locus_tag="VLL76_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007677895.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HSV27956.1"
                     /translation="MASRVCVGAVVGAHGVRGGVRIKSFTDCPQDVGSYGPVEDESGE
                     RRFKLKVTGEAKGLVIATLEGVKDRDAAEALRGTRLYVPRARLPKLEEDEFLVSDLVG
                     LEARNEAGEVVGIVRGVADFGAGEVVDIALKAGGSLMVPFTKAAVPEVDVRGGWLAFE
                     TPVYAPVEKEDQELGEPGDE"
     gene            2705..3406
                     /gene="trmD"
                     /locus_tag="VLL76_00320"
     CDS             2705..3406
                     /gene="trmD"
                     /locus_tag="VLL76_00320"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HSV27957.1"
                     /translation="MTNNPWHATVLTIFPEMFPGPLGHSLAGRALANGTWRLDAVNIR
                     DFAKDKHRSVDDEPFGGGAGMVMRPDVVDAAIQGGKGPGPLIYMTPRGRLLDQPLARE
                     LAAGPGCTILCGRFEGVDQRVLEANEAVEVSLGDFVLSGGELPALVLLDAVVRLLPGV
                     VGKEESLTEESFEWGLLEYPHYTRPADWQGRAVPEVLLSGHHEKIRGWRQRQSEEITR
                     QRRPDLWDRYVAARK"
     gene            3454..>3702
                     /gene="rplS"
                     /locus_tag="VLL76_00325"
     CDS             3454..>3702
                     /gene="rplS"
                     /locus_tag="VLL76_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HSV27958.1"
                     /translation="MNIIQQLEQEQIAKLTDGKAIPEFSPGDTVKVNVKVVEGGRERV
                     QAYEGVCIGRKNDGLNSHFVVRKISYGEGVERIFPLYSP"
BASE COUNT          666 a         1169 c         1309 g          558 t
ORIGIN      
        1 aacccatccg ggttcatatg ccggttccgg cgccagggca agcggagcgt gacgcgataa
       61 gggcgaattc cgggaaagtc ttgactcccc gccgacgcgg gcataaaaac cccgtctctc
      121 tgttggttcg ccacgggaaa accgccacca cggtggcccg ccagtccgcg aaggtacgcg
      181 cactggcgcg aaaccgtttg tggatagggg attctccggg cgggccgacg gcacgtgaag
      241 ggaaaccatg ttcgaaagtc tcagccaacg cctgacgaca gtgttcggga agctcaccgg
      301 ccgcggtgcg ctgtccgagg ccgacgtcac ggaagcgctg cgcgaggtcc gcgtcgcgct
      361 gctggaggcc gacgtcgccc ttcccgtggt caaggatttc gtcgcccgcg tcaaggatcg
      421 cgcggtcggc gccgaggtgg tcaagtcggt cagccccggc cagatggtgg tcaagatcgt
      481 ccatgacgag ctggtcgcca ccctgggcac cgagggcgtc gcgctgaacc tgaacgccgt
      541 gccgccggcc gtcatcctga tggtcggcct gcagggttcg ggcaagacca cgacctcggg
      601 caagctggcc gtgcgcctga agaaggagcg caagaaggtc ctgctggcgt cgctcgacgt
      661 ctaccgcccg gccgcgcagc agcaattgga gatcctggcc aagcaggccg aggttggctc
      721 gctgcccatc gtcatgggcg agatgccggt ggccatcacc aggcgcgccc tcgataccgg
      781 ccgcaaggaa ggctacgacg tcgtcatcct cgacaccgcc ggccgcctgc acatcgacca
      841 ggagctgatg gccgaggtcg cccaggtgcg cgacgtcgcc aatccggtcg agaccctgct
      901 ggtcaccgac gccatgaccg gccaggacgc cgtcaccctg gcgcgcgaat tcaacgaaaa
      961 ggtcggcgtc accggcatcg tgctgacccg cgtcgatggc gacgcccgcg gcggtgccgc
     1021 gctgtccatg cgccacgtca ccggccggcc catcaagttc ctgggccagg gcgagaagct
     1081 cgacgcgctg gaggttttcc atcccgaccg catcgccggc cgcatcctgg gcatgggcga
     1141 cgtggtgtcg ctggtcgaaa aggccatcga gcacgtcgac caggaagagg ccgagaagct
     1201 tgccaagcgg atggagaagg gcaagttcga cctcaacgac atgctgagcc agttcaagca
     1261 ggtcgagaag atgggcgacc tcaagggcat catcggcatg ctgcccggca tcggcaagat
     1321 ggccggcgcg ctgaaggacg ccaacatcga caacaagctg ctgggccgcc agaaggcgat
     1381 catccaggcg atgaccccgg ccgaacggcg caaccccgac ctcatcaagg cgtcgcgcaa
     1441 acgccgcatc gcggtcggct cgggcgtgtc ggtgcaggac gtcaacaagc tgctcaagca
     1501 atacgaacag atggccgccg tcatgaagaa ggtcggcaag ctgggccaga agggtttgat
     1561 gcgccacgga ctgggcgggc tgatgccccc cggcttcggc ggcggcaagg ggttcggccg
     1621 ctagcggccg gaaggtgtct gaggttgggc ggcagccctg tcctcttccg tcatgcccgg
     1681 acttgatccg ggcatccatg gatcaccggg tcaagcccgg tgatgacgaa ggaggtgaga
     1741 gaggtcctgc cgcatcgttg gttacggttt tgcttaaagg gaaatcgaaa tatggctctt
     1801 aagattcgcc tcgcccgctc gggcgccaag aagcgtccgt tctaccgcat cgtggtggcc
     1861 gacgcgcgct gcccgcgtga cggccgcttc atcgagaagg tcggcaccta caacccgctg
     1921 ctgccgcacg accacgccga gcgcctgacg ctcaacgaag agcgcgtgaa gcattggctc
     1981 ggcaacggcg cgcagccgac cgaccgcctg gtccgcatct tcgccgacaa gggcctggtc
     2041 aaggctccgg tccgcgccga gcagagcaag cagccgcagc cgaaggccaa ggcccagcag
     2101 cgcgccaagg aggccgccga gcgcgccgcc gccgccgccg ccgagggcga ggccgctgcc
     2161 gagtaacgac ccatggcttc ccgtgtgtgc gttggcgctg tggtcggcgc gcacggggtg
     2221 cgcggcgggg tccgcatcaa gagcttcacc gactgccccc aggacgttgg gtcctatggg
     2281 ccggtggagg acgagagcgg cgagcgccgg ttcaagctga aggtcaccgg tgaggccaag
     2341 ggcctggtga tcgccacgct tgaaggggtc aaggaccgcg atgccgccga ggcgctgagg
     2401 ggaacgcgtc tttacgttcc ccgcgccagg ttgcccaagt tggaagagga cgagttcctg
     2461 gtttccgacc tggtgggcct ggaagcgcgc aacgaggcgg gcgaggtcgt gggaattgtc
     2521 cgcggagtgg ccgatttcgg cgccggagag gtggtcgaca tcgcgctgaa ggcgggaggg
     2581 agcctgatgg tccccttcac caaggcggcg gttcccgagg tggacgtacg gggcggatgg
     2641 ctggcgttcg aaacgccggt ctacgccccg gtcgagaaag aggatcagga gcttggggaa
     2701 cccggtgacg aataatccgt ggcacgccac ggtgctcacc atcttccccg agatgttccc
     2761 gggaccgctg ggccattcgc tggccgggcg ggcgctggcg aacggaacgt ggcggctgga
     2821 tgcggtcaac attcgcgact tcgcgaagga caagcatcgc tcggtcgacg acgaaccctt
     2881 cggcggcggt gccggcatgg tgatgcgtcc cgacgtggtg gacgcggcca tccagggcgg
     2941 taagggtccg ggccccctga tctacatgac cccgcgcggt cggctgctgg atcagccgtt
     3001 ggcgcgggaa ctggcggcgg gcccggggtg caccatcctg tgcggccgct tcgaaggggt
     3061 cgaccagcgc gtgctggagg ccaacgaagc ggtcgaggtg tccttgggcg acttcgtgct
     3121 gtcggggggc gagctccccg cgctggtgct gctggacgcc gtcgtgcgtc tgctgcccgg
     3181 cgtcgtcggc aaggaggaat cgctgacgga agaaagtttc gagtggggcc tcctggaata
     3241 tccccactac acccgccccg ccgactggca gggaagggcg gtgcccgagg ttctgctttc
     3301 ggggcaccac gagaagatcc gcggctggcg ccagcgccag tcggaagaga taacccggca
     3361 gcgccggccg gacctgtggg accggtacgt cgccgccagg aagtaggttc aaaccaatgt
     3421 gccttcgggc actgggacag cgagggtagt tagatgaaca tcattcagca gctcgagcag
     3481 gagcagatcg ccaagctgac cgacggcaag gcgattccgg agttttcccc gggcgatacc
     3541 gtcaaggtca acgtcaaggt cgtcgaaggc ggccgcgagc gcgtgcaggc ctatgaaggc
     3601 gtctgcatcg gccgcaagaa cgacggcctg aacagccact tcgtggtccg caagatcagc
     3661 tacggcgaag gtgtggagcg tatcttcccg ctgtactcgc cc
//
LOCUS       DATIKR010000021         2889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_133543, whole genome shotgun sequence.
ACCESSION   DATIKR010000021 DATIKR010000000
VERSION     DATIKR010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133543"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..2358
                     /locus_tag="VLL76_00330"
     CDS             196..2358
                     /locus_tag="VLL76_00330"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV27959.1"
                     /translation="MAVERISTLRAVFSDPELEAKFRLDAMPKARRVAIGFCLIGLII
                     YPLGGLRDFAMGMDELHLSLVLGTRAIATLQTIWTLWRLWHATEPRQMIVPMAVHYVV
                     ACVLFAILFAVHPWLVPGQLGTAFILLCATVAPAFWPGTVVGGILFNLLLATLFAIST
                     FWRITDQLTAFATVVVTITFMMLGILLAYRAHHAARHDYLSLLEERRLRRELDEKRRE
                     AEAAAMAKSEFLAVMSHEIRTPMNGILGMARLMLDDGLPPRHRDQMETLRGSAESLLA
                     ILDDILDLSKLEAGRLEFEAVPFDLRNTVEAVVSLLGVRAAAKGLPLIAEIDPSLPAW
                     MAGDPGRLRQVLLNLVGNAIKFTDIGSVTVRATPFVSEDGGQGVEFSVIDTGIGIDSQ
                     TQARLFQSFSQADASISRRFGGTGLGLAICKRLVESQGGEIGVESTPGHGSRFWFRLG
                     MSPAAIPEGISSREAPLVELPPLSILLAEDNPINQKVALGFLSRGGHTVRIASTGSEA
                     LELAAQGGFDVVLMDMQMPEMDGLEATRAIRALPRPLGSVPIVALTANAMRGDEERCR
                     AAGMDDHVSKPIDPRLLFAAIGRVLADRDRPHVPQPTVRPAEMVDNAAIEALRAHLGA
                     EQAGELVGMFLDNAGAACRQLEGFIADGPLDEIRRTAHDLKSMSGYVGARMLADLAAA
                     IEEAARDGHESEARALAAEVAGVWRGVEDRLQRSFVTA"
     gene            complement(2655..>2889)
                     /locus_tag="VLL76_00335"
     CDS             complement(2655..>2889)
                     /locus_tag="VLL76_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HSV27960.1"
                     /translation="LSGRMPVTDTLAYEWYDTPNIHFCTIRDFLVLCRDLNVRVERGI
                     ALDRDGRVLSYDGTSWRANLLAAQGVFVLSRAG"
BASE COUNT          431 a         1045 c          950 g          463 t
ORIGIN      
        1 cgaccggcag ccacctcaag aagctgaagg ccaagttccc caagcgcgat ttccccgccc
       61 tgttcgaggt cggcctgacc acagccccgc ccggcggcct gttcgaggca gtgttgtcca
      121 ccgccagcaa ggccgtaccc aagcgctaag atcaaccggc tttgcgcttg cccgggattg
      181 cggtacacct gggggatggc ggtcgagcgg atttcaaccc tcagggctgt attctcggac
      241 ccggaactgg aagccaagtt ccggctcgac gccatgccca aggcccggcg cgtcgccatc
      301 ggcttctgcc tgatcggcct gatcatctat cccttgggcg gcttgcgcga cttcgccatg
      361 gggatggacg aactgcacct gtcgctggtg ctgggcaccc gcgccatcgc caccctgcag
      421 accatctgga cgctgtggcg gctgtggcac gccaccgaac cgcgccagat gatcgtgccc
      481 atggcggtgc attatgtggt cgcctgcgtg ctgttcgcca tcctgttcgc ggtccatccg
      541 tggctggttc ccggccagtt gggcaccgcc ttcatcctgt tgtgcgccac ggtcgcgccc
      601 gccttctggc cgggcaccgt ggtcggcggc atcctcttca acctgctgct tgcgacgctg
      661 ttcgccatct cgaccttctg gcgaatcacc gaccagctga ccgccttcgc caccgtggtg
      721 gtcaccatca ccttcatgat gctgggcatc ctgctggcct atcgcgccca ccacgctgcc
      781 cgccacgact acctgtcgct gctggaggag cgccggctgc gccgcgagct ggacgaaaag
      841 cggcgcgagg ccgaggcggc ggcgatggcc aagtcggagt tcctggcggt gatgagccac
      901 gagatccgca cccccatgaa cggcatcctg ggcatggcgc ggctgatgct ggatgacggc
      961 ctgccgccgc gccaccgcga ccagatggag acgctgcgcg gctcggccga gtcgctgctg
     1021 gcgatcctgg acgacatcct ggacctgtcc aagctggagg ccggccggct ggaattcgag
     1081 gcggtgccgt tcgacctgcg caacacggtc gaggcggtgg tcagcctgct gggcgtgcgc
     1141 gccgccgcca aggggctgcc gctgatcgcc gagatcgacc cgtcgctgcc cgcctggatg
     1201 gccggcgacc ccggaaggtt gcgccaggtc ctgctcaacc tggtgggcaa cgccatcaag
     1261 ttcaccgaca tcggcagcgt caccgtccgc gccaccccct tcgtcagcga ggacggcggc
     1321 cagggcgtcg agttctcggt gattgacacc ggcatcggca tcgattcgca gacccaggcc
     1381 cgcctgttcc agtcgttcag ccaggccgac gcctcaatct cgcgccgctt cggcggcacc
     1441 ggcctggggc tggccatctg caagcggctg gtcgagtccc agggcggcga gatcggcgtc
     1501 gaaagcaccc ccggccacgg cagccgcttc tggttccgcc tgggcatgtc ccccgccgcc
     1561 atcccggaag gcatttccag ccgcgaggcg ccgctggtgg aattgccgcc gctgtcgatc
     1621 ctgctggccg aggacaaccc catcaaccaa aaggttgcct tgggcttcct gtcgcgcggc
     1681 ggccacaccg tgcggatcgc ctcgaccggc tccgaggcgc tggagctggc agcccagggc
     1741 ggcttcgacg tggtgctgat ggacatgcag atgcccgaga tggacggcct ggaggccacc
     1801 cgcgccatcc gcgcgctgcc gcgccccctg gggtccgtcc ccatcgtcgc cctgaccgcc
     1861 aacgccatgc gcggcgacga ggagcgctgc cgcgccgccg gcatggacga ccacgtgtcc
     1921 aagcccatcg acccgcgcct gctgttcgcc gccatcggcc gggtcctggc cgaccgcgac
     1981 cgcccgcatg tgccgcaacc gaccgttcgt ccggcggaaa tggtggataa tgccgccatc
     2041 gaggcgctgc gcgcccatct tggcgccgaa caggcgggcg aactggtcgg catgttcctg
     2101 gacaacgccg gcgccgcctg ccgccagttg gaaggcttca tcgccgacgg cccgctggac
     2161 gagatccgcc gcaccgccca cgacctgaag agcatgtcgg gctatgtcgg cgcccgcatg
     2221 ctggccgacc tcgccgccgc catcgaggag gccgcccgcg acggccacga gtccgaagcg
     2281 cgcgccctgg ccgccgaggt ggccggagtc tggcgcggcg tcgaggaccg gttgcagcgg
     2341 agtttcgtga cggcgtgagg ggcgccgcgt gaacccgcaa agcgcccggt cgatcgctcg
     2401 tcatgcgcgt gcggtgcctc ccctccatcc ccttggccgc tatgcggccc tccccttcat
     2461 ccccgtcttc tttccgggtg cctgccgctc aggctttaca acatcgtcat ggccgggctc
     2521 gacccggcca tccacgcgga cccacctaag gcgctgatat taaagcgaaa ttcgcggatg
     2581 ccacgtggat cgccgggtca agcccggcga tgacgggaag gggggccccg gaaatcggcg
     2641 atgaacctga cgactcagcc ggcgcggctg agcacgaaca cgccctgggc cgccagcaaa
     2701 ttggcgcgcc agctggtgcc gtcataggac agcacccggc cgtcacggtc cagcgcgatg
     2761 ccgcgctcga cccgcacgtt cagatcccgg cacagcacca ggaagtcccg gatggtgcag
     2821 aagtggatgt tgggggtgtc gtaccattca taggccaggg tgtcggtgac cggcatgcgg
     2881 cccgacagc
//
LOCUS       DATIKR010000022         2925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_48688, whole genome shotgun sequence.
ACCESSION   DATIKR010000022 DATIKR010000000
VERSION     DATIKR010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48688"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1521)
                     /locus_tag="VLL76_00340"
     CDS             complement(<1..1521)
                     /locus_tag="VLL76_00340"
                     /inference="COORDINATES: protein motif:HMM:NF018497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HSV27961.1"
                     /translation="MTLQVAVQITGDAASLKGEAASSAAAIKTVGATATAAGAAVKQF
                     GTDGQAAIRVVGAAADAAAEAAQRLAAEQANAARIKDAYGLSSIRNAAQLKEEADAAA
                     QAAAVQAAAAQRQAAAVQAFRDRLNPVAKVQREAAQATSELQGWLAKGAITQDEYAAG
                     VEAVELGLRKMGKEAGVSAGQIQMARRTVIMNLADMGQVAAATGGNMGSMVAVLPDLF
                     YGLRMMGGGAATAATGMAALAGTVGLAAAAYYLHKDSVKELGLALQASNDNVGLSRDQ
                     LEGLAKSITGLGNVSVMEARELEGALARVGSVGNDNYKRLVTGAADYAALVGGDLVDA
                     NVALTKALGEPAKAAAALDAQMNILTAEELRHIQALDRAGEKEEAQALLLEAIEQKAA
                     GAAKEVGFFTRAINGISDAVDAAGKALGPSGLDQLLQDARDKAAAARRGDFSWSKGRF
                     LTARDAEIADSDVRFYEERQRLEREAPAQQAETARRETAIKRGYEVADAITPGLSQR"
     gene            complement(1523..1897)
                     /locus_tag="VLL76_00345"
     CDS             complement(1523..1897)
                     /locus_tag="VLL76_00345"
                     /inference="COORDINATES: protein motif:HMM:NF020388.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1799 domain-containing protein"
                     /protein_id="HSV27962.1"
                     /translation="MLGPRGGRAPSRDEVDDLVAFGAPADVIDRAKAPRQAADFAVHD
                     DCRAVVEVFLGCDTQWRMDDGRPIGLDFTAVAVVSRALGHRLGKGLFGGLKTMEAAAL
                     KAFREIDKGGRAPRCPLMMRRR"
     gene            complement(1918..2298)
                     /locus_tag="VLL76_00350"
     CDS             complement(1918..2298)
                     /locus_tag="VLL76_00350"
                     /inference="COORDINATES: protein motif:HMM:NF020330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HSV27963.1"
                     /translation="MAFVFVKNKEVTWPVTVRVPGDAGTVSTQTFKATFQILDRDRVD
                     ELGKQARANQTLAASISETVDTEVDVLVLLEATKGWEGVEDQSKQAIPFSDEMLRALV
                     GVPYVRQAMFEAYTHAAQGRKAKN"
     gene            complement(2309..>2925)
                     /locus_tag="VLL76_00355"
     CDS             complement(2309..>2925)
                     /locus_tag="VLL76_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27964.1"
                     /translation="VEYRAAHGGFDSVSLYLNIDGVLHKLIGSRGTWSLDFAGDQIPL
                     IKFSFVGLWTKPVAVALPAVSYAAFVDPEEATETNTTTVRLHGYDAILVSANLALNAN
                     PRIPPRVNKRWVAITDHPVSGEMVIEEPDLAVKDYYAAAEDHVLGAMQIVHGTQPGNI
                     VEVGGPGAQVVRLGKGQADDIVTLTLGLSLTNEVGGYDVSIIFK"
BASE COUNT          406 a         1039 c          972 g          508 t
ORIGIN      
        1 acgttgcgac aggccgggcg tgatggcgtc agccacctcg tatccgcgct tgatcgcggt
       61 ttcgcgccgg gcggtttcag cctgctgggc gggcgcctcg cgctccaggc gctggcgctc
      121 ctcgtagaag cgcacgtcgc tgtcggcgat ctcggcgtcg cgggcggtca ggaaccgtcc
      181 cttcgaccag ctgaagtcgc cgcgccgggc ggcggctgcc ttgtcgcggg catcttgcag
      241 caattggtcc aggccggacg gaccaagcgc cttgccggct gcgtcgacgg catccgaaat
      301 gccattgatc gcgcgggtga agaagcccac ttcctttgcc gccccggccg ccttctgctc
      361 gatcgcctcc agcagcagtg cttgggcttc ctccttctcg ccggcgcggt ccaatgcctg
      421 gatgtggcgc agttcctccg ccgtcaggat gttcatttga gcatccagcg cagccgccgc
      481 cttcgccggc tctcccaggg ccttggtcag cgcgacgttg gcatcgacca ggtcgccgcc
      541 caccagggcg gcataatcgg cggcgccggt gaccaggcgc ttgtaattgt cgttgcccac
      601 actgccgacg cgggccagcg cgccttccag ctctcgggcc tccatcacgc tgacgttgcc
      661 cagtccggtg atcgacttgg ccagcccctc caactgatcg cgagagaggc cgacattgtc
      721 gttggacgcc tgcagcgcca ggcccaattc cttgaccgaa tccttgtgca ggtaataggc
      781 ggcggccgcc aatccgactg taccggccaa cgcggccatg cccgtggccg ccgtcgccgc
      841 cccgccgccc atcatgcgca ggccgtaaaa aaggtcgggc aggaccgcca ccatggaccc
      901 catgttgccg ccagtggcag ctgccacctg gcccatgtcc gccaggttca tgatgacggt
      961 gcggcgcgcc atctggatct ggccggcaga caccccggcc tccttcccca tcttgcgcag
     1021 ccccaactcg acggcctcga cgccggcggc gtattcgtcc tgggtgatgg cgcccttggc
     1081 cagccagccc tgcaattctg acgtggcctg ggcggcttcg cgctggacct tggcgactgg
     1141 attgaggcga tcgcggaatg cctggacggc ggcggcctgg cgctgggcgg cggcggcctg
     1201 gacggcggcg gcctgggccg ccgcgtccgc ttcttccttc aactgggctg cattgcggat
     1261 cgatgacagg ccgtaggcgt ccttgatgcg ggccgcgttg gcctgctcgg ccgccagccg
     1321 ctgggccgct tcggcggcgg catcggcggc agcgcccacc actcggatcg ccgcctggcc
     1381 gtcggtgccg aactgcttga cggcggcccc ggcggcggtg gcggtggcgc ccactgtctt
     1441 gatggcggcc gccgacgatg ccgcctcgcc cttgaggctg gccgcatcgc cggtaatctg
     1501 gaccgccacc tgcagcgtca cgtcatctcc ttcgcatcat caatgggcag cgcggcgccc
     1561 gcccgccctt gtcgatctcc ctgaaggcct tcagggcggc ggcttccatg gtcttgagtc
     1621 cgccgaacag ccccttgccc agccggtgcc ccagggcgcg gctgacgacg gcgacggccg
     1681 tgaaatccag gccgatgggg cggccgtcat ccatccgcca ttgcgtgtcg caccccagga
     1741 acacctcgac gaccgcccgg cagtcgtcat gcaccgcgaa atcggccgcc tgccttggag
     1801 ccttggcccg gtcgatgaca tcggccgggg ctccgaacgc gaccaggtcg tcgacctcgt
     1861 cgcggctggg cgcccggccg ccacgcggac caagcaccca atagcgggcg gcctcctcta
     1921 gttttttgcc ttgcggccct gggccgcgtg ggtataggcc tcgaacatgg cctggcggac
     1981 gtaggggacg ccaaccagcg cccgcagcat ttcgtccgag aacgggatcg cctgcttgct
     2041 ctggtcctcg acgccttccc agcccttggt ggcctccagc agcaccagga cgtcgacctc
     2101 ggtatcgacc gtctcgctga tcgacgcagc cagcgtctgg ttggcccggg cctgcttgcc
     2161 caactcatcg acgcggtcgc ggtccaggat ctggaaggtg gccttgaagg tctgcgtgct
     2221 gacggtgccg gcgtcacccg gcacacgcac ggtcaccggc caggtgacct ccttgttctt
     2281 gacgaaaacg aacgccatgc tgcccccctt acttgaagat gatcgagacg tcgtagccgc
     2341 cgacctcgtt ggtcagcgac aggccgagcg tcagcgtgac gatgtcgtcg gcctgcccct
     2401 tgcccagccg cacgacctgg gcgccggggc cgccgacctc gacgatgttg ccgggttggg
     2461 taccgtggac gatctgcatc gcgcccagca cgtggtcctc ggcggcggcg tagtagtcct
     2521 tgacggccag gtcgggctcc tcgatgacca tctcgccgga caccgggtga tcggtgatgg
     2581 cgacccagcg cttgttgacc cggggcggga tccgcgggtt ggcgttcagc gccaggttgg
     2641 ccgacaccag gatggcgtcg tagccgtgca gccgcacggt ggtggtgttg gtctcggtgg
     2701 cctcctcggg atccacgaag gcagcgtagg acaccgccgg cagcgccacc gccactggct
     2761 tggtccacag gccgacgaag ctgaacttga tcagcgggat ctggtcgccg gcgaagtcca
     2821 gcgaccaggt gccgcgcgag ccgatcagct tgtgcaggac accgtcgatg ttgagataaa
     2881 ggctgacgct gtcgaacccg ccatgggcgg cacgatactc gacgt
//
LOCUS       DATIKR010000023         1990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_12631, whole genome shotgun sequence.
ACCESSION   DATIKR010000023 DATIKR010000000
VERSION     DATIKR010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12631"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..402)
                     /locus_tag="VLL76_00360"
     CDS             complement(49..402)
                     /locus_tag="VLL76_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV27965.1"
                     /translation="MKKVGLVLAALLVAPFAANAADAPAAFNQCKACHKVEAGKNGVG
                     PSLFGVFGKKAGMAEGFKYSDAHKASGLTWDEATLSKYLADPKGTVPGNKMAFAGIKK
                     PEDLKAVVEYLKTVK"
     gene            608..>1990
                     /gene="hrpB"
                     /locus_tag="VLL76_00365"
     CDS             608..>1990
                     /gene="hrpB"
                     /locus_tag="VLL76_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HSV27966.1"
                     /translation="MTPLPIDTVLPDIRRALAGSAGLVLQAPPGAGKTTRVPLALLDQ
                     AWLAGNCIVMLEPRRLAARAAAARMAETLGEAVGETVGYRIRLDSKVGPRTRIEVVTE
                     GILTRMLQDDPSLPGVGLVIFDEFHERSLNADLGLALCLESQGALRDDLKLLVMSATL
                     DGGPVARLMGDAPVVTSEGRAFPVETRFLSRPEPRRFVDEAVAAIVRALNEETGDVLA
                     FLPGAGEIRRVEALLTDHPAARRVAVAPLFGDLSQADQDRAIRPSRDGGRKVVLATAI
                     AETSLTIEGVRVVVDCGQMRVPRFDPSSGMTRLVTIPVSRASADQRRGRAGRLGPGVC
                     YRLWSEAEDRALVGFTAPEIAEADLAPLALDLAQWGIGDAGELAWLDPPPAAALAQAR
                     ELLAELGAVDESGRITPHGRAMNRLSMHPRLAHMVLKARDLGLGGLACELAALLSERD
                     VLRAERGCRDG"
BASE COUNT          280 a          683 c          703 g          324 t
ORIGIN      
        1 cgcccggtcg ggcggcggcg ccttggatcg ccttggcgac gcgtgaaatt acttcacggt
       61 cttgaggtac tcgacgacgg ccttcaggtc ctcgggcttc ttgatgccgg cgaaggccat
      121 cttgttgccg gggacggtgc ccttggggtc ggccaggtac ttgctcaggg tcgcttcgtc
      181 ccaggtcagg ccggaagcct tgtgggcgtc ggagtacttg aagccttcgg ccatgccggc
      241 cttcttgccg aacacgccga acagcgacgg gccgacgcca ttcttgccgg cttccacctt
      301 gtggcaggcc ttgcactggt tgaacgcggc cggggcgtca gcggcgttgg cggcgaacgg
      361 ggcaaccagc agggcggcga gaaccagacc aaccttcttc atcgaaatct cccaagtctt
      421 gcgttttcag gcttacggct ggccggcacg cgaaccttgc cgtcgaaaac catgatagaa
      481 agccatgatg gctaaacttt ggcgcaaaag gggtagtccc ccgcgcgggc cgcattatgt
      541 gcaagaatct tccatagttc aacaaagtgg taaccacgca ttcgaaagtt cggttaaaca
      601 gccgccgatg accccgctgc ccatcgatac cgtgctgccc gacatccgcc gtgccctggc
      661 tggttcggcc gggctggtgc tgcaggcgcc gcccggcgcc ggcaagacca cgcgcgtgcc
      721 gctggcgctg ctggaccagg cctggctggc cggcaactgc atcgtgatgc tcgagccgcg
      781 ccgcctggcc gcccgcgccg ccgccgcccg catggccgaa accctgggcg aggcggtggg
      841 cgagacggtg ggctaccgca tccgcctgga ttccaaggtc ggccctagga cccgcatcga
      901 ggtggtcacc gagggcatcc tgacccgcat gctgcaggac gatccgtcgc tgccgggcgt
      961 cgggctggtg atcttcgacg aattccacga acgctcgctc aacgccgacc tgggcctggc
     1021 gctgtgcctg gaaagccagg gcgcgctgcg cgacgacctc aagctgctgg tgatgtcggc
     1081 gaccctggac ggcggcccgg tggctcggct gatgggcgac gcgccggtgg tcaccagcga
     1141 gggccgcgcc ttcccggtcg aaacccgctt cctgtcccgg ccggagccgc gccgcttcgt
     1201 cgacgaggcg gttgccgcca tcgtccgcgc gttgaatgag gaaaccggcg acgtgctggc
     1261 gttcctgccc ggtgccggcg agatccgccg ggtcgaggcg ctgttgaccg accatcccgc
     1321 cgcgcgcagg gtcgccgtcg cgccgctgtt cggcgacctg tcgcaggccg accaggaccg
     1381 cgccatccgg ccgtcgcgcg acggtggccg caaggtagtg ctggcgaccg ccatcgccga
     1441 gacctcgctg accatcgagg gcgtgcgggt ggtggtggat tgcggccaga tgcgggtgcc
     1501 gcgcttcgat cccagttcgg gcatgacccg gctggtcacc attccggtca gccgcgcctc
     1561 ggccgaccag cgtcggggcc gcgccggccg cctggggccg ggcgtgtgct atcgcctgtg
     1621 gagcgaggcc gaggaccgcg ccctggtggg cttcaccgct cccgagatcg ccgaggccga
     1681 cctggcgccg ctggcgctcg atttggcgca atggggcatc ggcgacgccg gcgaactggc
     1741 atggctcgat ccgccgccgg ccgccgccct ggcccaggcc cgcgaattgc tggccgaact
     1801 gggggcggtg gacgaaagcg gccgcatcac cccccatggc cgcgccatga accggctgtc
     1861 catgcatccg cgcctcgcgc acatggtgct gaaggcgcgt gaccttggct tgggcgggct
     1921 ggcctgcgaa ctggcggcat tgctgtcgga acgcgacgtg ctgcgggccg agcgcggctg
     1981 ccgcgacggt
//
LOCUS       DATIKR010000024         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_12655, whole genome shotgun sequence.
ACCESSION   DATIKR010000024 DATIKR010000000
VERSION     DATIKR010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12655"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VLL76_00370"
     CDS             complement(<1..523)
                     /locus_tag="VLL76_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27967.1"
                     /translation="MALSAIALCSRALLKIGAATIASFDDGTAESEVAANLYPAVRDA
                     LLSSHPWNFATGQVTLPRLAAQPVADYAHAFQLPADFLRALSAGVSGRGFGLSYRIAE
                     SRLHCDSDEVVLTYVFRPDELSFPPFFDQALIARLAAEFCIPLTESTTRAEFLYRLSE
                     DEFRRAKLIDGQQD"
     gene            complement(606..875)
                     /locus_tag="VLL76_00375"
     CDS             complement(606..875)
                     /locus_tag="VLL76_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27968.1"
                     /translation="MAYQSKDLSVLAYANGFTLWHYVTADATTTVDGAGYFNAAADML
                     RAGDIVIANVETGGTPKAGLFFVSQAAAGVVDVADMTQVGTANSD"
     gene            complement(889..1707)
                     /locus_tag="VLL76_00380"
     CDS             complement(889..1707)
                     /locus_tag="VLL76_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HSV27969.1"
                     /translation="MSTSIVNAYSRQYGAEVHLAYQRQGTKLRNTVRTRNNVTGAIAV
                     FQKVGKGAASTKARHGKVPVMNVEHQAVECQLYDYYAGDWLDKLDELKVEHDERAVLT
                     NAGAYALGRKTDELIIAELDKSTNYAADGTTGLTKAKVLEAFEMLGGADVPDDGERYA
                     VVGWKQWSDLLQIPEFSDADYIGDDDLPWKGTQAKKWLGTLWMPHSGLTKSGSVRYCY
                     WYHKTAVGHACGAEVKSEITYHGDRAAWFVNNMMSQGAALVDPTGVVSLRCLEA"
BASE COUNT          269 a          584 c          668 g          327 t
ORIGIN      
        1 cgtcctgttg gccgtcgatc agcttggcgc ggcggaactc gtcctcggac aggcggtaca
       61 ggaattcggc gcgggtggtg ctttcggtca gcggaatgca gaattccgcc gccagccgcg
      121 cgatcagggc ctggtcgaag aacggcggga acgacagttc gtcgggccgg aacacatagg
      181 tcagcaccac ctcgtcggag tcgcagtgca gccggctttc ggcgatgcgg taggacaggc
      241 cgaagccgcg tcccgacacg cccgccgaca gcgcccgcag gaagtcggcc ggcagttgga
      301 aggcgtgggc ataatcggct accggctggg cggccagccg cggcagggtg acctggccgg
      361 tggcgaagtt ccacggatgc gacgacagca gcgcgtcgcg caccgccgga tacaggttgg
      421 ccgccacctc ggactcggcg gtgccgtcgt cgaaggaagc gatggtggcc gcgccgatct
      481 tcaaaagcgc gcgcgaacac agcgcgatgg cggacagtgc catggcggtt tctcctcgtc
      541 aaaaagccga cgggccgaat tcctcgcgga acccggcccg tcggcaggtt ggatgggacg
      601 cttgcttagt cgctgttggc ggtgcccacc tgggtcatgt cggcgacgtc gaccacgccg
      661 gccgcggcct gcgacacgaa gaacaggccc gccttgggcg tgccgccggt ctcgacgttg
      721 gcgatgacga tgtcgccggc gcgcagcatg tcggcggcgg cgttgaaata gccggcgccg
      781 tcgacggtgg tggtggcgtc ggcggtgacg tagtgccaca gcgtgaagcc gttggcgtag
      841 gccagcacgc tgaggtcctt ggactgatag gccattttcg gtgtctcctt aggcttcgag
      901 gcagcgcagc gagacgacgc cggtcggatc gaccagcgcc gcgccctgcg acatcatgtt
      961 gttgacgaac caggcggcac ggtcgccgtg gtaggtgatc tcggacttga cctcggcgcc
     1021 gcaggcatgg ccgacggcgg tcttgtggta ccagtagcag tagcggacgc tgccggactt
     1081 ggtcaggccg gaatgcggca tccacagggt gcccagccac ttcttggcct gggtgccctt
     1141 ccacggcagg tcgtcgtcgc cgatgtagtc ggcgtccgag aactcgggga tctgcagcag
     1201 gtcggaccac tgcttccagc ccaccaccgc atagcgctcg ccgtcgtcgg ggacgtcggc
     1261 gccgcccagc atctcgaacg cctccagcac cttggccttg gtcaggccgg tggtgccgtc
     1321 ggcggcgtag ttggtggact tgtcgagctc ggcgatgatc agctcgtcgg tcttgcggcc
     1381 cagcgcatag gcgccggcgt tggtcagcac cgcacgctcg tcgtgctcga ccttcagctc
     1441 gtccagcttg tccagccagt cgccggcgta atagtcgtac agctggcatt cgaccgcctg
     1501 gtgctcgacg ttcatcaccg gcaccttgcc gtggcgggcc ttggtgctgg cggcaccctt
     1561 gccgactttc tggaagacgg cgatggcgcc ggtgacgttg ttgcgggtgc gcacggtgtt
     1621 gcgcagcttg gtgccctggc gctggtaggc caggtggact tcggcgccat actggcggga
     1681 ataggcgttg acgatactcg tggacatgat ctgttccttt ggtctgtggt ttggttcacg
     1741 tgggcgcgcc cgcccggccg gttctggcaa ctccgtgcgc atcggggccg ccgccgtcgg
     1801 gcgggcgcaa agggtccgcc gggccgcgca aggcccggtt ctccggcg
//
LOCUS       DATIKR010000025         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_85245, whole genome shotgun sequence.
ACCESSION   DATIKR010000025 DATIKR010000000
VERSION     DATIKR010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85245"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1002
                     /locus_tag="VLL76_00385"
     CDS             <1..1002
                     /locus_tag="VLL76_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004178925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSV27970.1"
                     /translation="KIGLVSAHPRIVMGDQLQRMSKTQLQLALDAPEIIFARTRADQK
                     WRIVKALQAKGETVAVTGDGVNDAPALKQADIGIAMGRNGTDVARQAADMVLVDDNFA
                     SIVAAIEEGRTVFHNIRKFLTYILTSNIPEIVPYLAFALFDLPLALTVVQILAVDLGT
                     DMLPALALAAEKPHKDAMRRPPRPRKERLIDSRLLVRAYGFLGPQQALAAMAAFFMVL
                     ASGGWAWGEAAPPELYSRATTACLTTIVVMQMANLLVCRSRSESVFAANPFANAMIPA
                     GLAVEAVLLLMIVYTPAGNALFGTAPLAGADWLLPLPFAAAMIVAEEGRKAIVRRST"
     gene            1094..1645
                     /locus_tag="VLL76_00390"
     CDS             1094..1645
                     /locus_tag="VLL76_00390"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HSV27971.1"
                     /translation="MRARLVVAAFAALLVAGCAQSPSGTTGGTGSTSTSTSSAAVTDK
                     QFVADAASMGLNEVSVGRLAAERASSPQVRSFGRHMAEEHGRNNDRLRAAASQAAVPV
                     PSQPDREEIAKMDKLDDLSGPAFDRAFVNQMVADHQEAVRLFEQQANQGQNPSLRTYA
                     TQTLPRLRQHLSDAQALARSQGG"
     gene            1674..2054
                     /locus_tag="VLL76_00395"
     CDS             1674..2054
                     /locus_tag="VLL76_00395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27972.1"
                     /translation="MIRLATAVAAIALLAGPALAQDVSSGRDSQTRIKERSGIQQDQT
                     AETPSGSTTSESMSSQQQPGQVLSRPADCLPNDPRPECGGTSDMVTPEQSDQQLGQTP
                     GSEPDASEYGQPEREREREDMPSR"
     gene            2132..>2422
                     /locus_tag="VLL76_00400"
     CDS             2132..>2422
                     /locus_tag="VLL76_00400"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF013296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HSV27973.1"
                     /translation="MILDLRDMIVAAREGGYALPVFEVAGVALARAAVEAAADMDSPV
                     ILHPVRDEDLLMPALVALAKRAPVPVIPVIGGITSEDDAARAIRLGAGGLICP"
BASE COUNT          383 a          882 c          802 g          355 t
ORIGIN      
        1 aagatcggat tggtgagcgc ccacccgcgc atcgtgatgg gcgaccaatt gcagcgcatg
       61 tcaaagaccc agttgcagtt ggccctggac gcccccgaga tcatcttcgc ccgcacccga
      121 gccgaccaga aatggcggat cgtcaaggcg ctccaggcca agggcgaaac ggtggcggtc
      181 accggcgacg gggtcaacga cgcccccgcg ctcaagcagg ccgacatcgg catcgccatg
      241 ggccgcaacg gcaccgacgt ggcgcgccag gcggccgaca tggtgctggt ggacgacaat
      301 ttcgccagca tcgtcgccgc catcgaagaa ggccgaaccg tcttccacaa catccgcaag
      361 ttcctgacct acattctgac ctcgaacatc ccggaaatcg tgccctacct ggccttcgcc
      421 ctgttcgacc tgccgctggc gctgacggtg gtgcagatcc tggcggtcga tctgggcacc
      481 gacatgctgc cggccctggc actggccgcc gagaagccgc acaaggacgc catgcggcgg
      541 ccgccgcgcc cgcgcaagga gcgattgatc gattcccgcc tgctggtccg cgcctacggc
      601 ttcctgggtc cgcaacaggc cctggccgcc atggcggcgt tcttcatggt gctggcgagc
      661 ggcggctggg cctggggcga agccgcgccg cctgagcttt attcgcgtgc cacgaccgcc
      721 tgcctgacga ccatcgtggt gatgcagatg gccaacctgc tggtctgccg gtcccgcagc
      781 gaatcggtgt tcgccgccaa cccgttcgcc aacgccatga tcccggcagg cctggcggtc
      841 gaggccgtgc tgttgctgat gatcgtctat accccggccg gcaacgccct gttcggaacg
      901 gcgccgctgg cgggagccga ctggctgctg cccctgccgt tcgccgccgc catgatcgtg
      961 gccgaggaag ggcgcaaggc gatcgtgcgt cgcagcacct aaaggaggat tgcgcacgcg
     1021 ggtgggcggg gcctccgaac cctattgcct ccggtttgtt ggcggggaag cggaattcgg
     1081 atggaggatg gacatgcgcg cccgtctggt cgtcgctgct ttcgccgccc tgctcgtcgc
     1141 cggttgtgcc cagtcgccct cgggcaccac cggcgggacc ggttccacgt ccacctccac
     1201 ctcgtcggcc gccgtcaccg acaagcagtt cgtcgccgat gccgcctcca tgggcctcaa
     1261 cgaagtttcc gtcggccgcc tggccgccga gcgcgcttcg tcgccgcagg tgcgcagctt
     1321 cggccgccac atggccgagg agcacgggcg caacaacgac cgcctgcgtg ccgccgccag
     1381 ccaggccgcc gtgccggtgc cgtcgcagcc cgaccgcgag gaaatcgcca agatggacaa
     1441 gctggacgac ctgagcgggc cggccttcga ccgcgccttc gtcaaccaga tggtcgccga
     1501 ccaccaggag gccgtacgcc tgttcgagca gcaggccaac cagggtcaga atcccagcct
     1561 gcgcacctat gccacccaga cgctgccccg gttgcgccag cacctgtccg acgcgcaggc
     1621 gctggcccgc agccagggcg gctgaccgcc gccaaccaca acggagacgc cgcatgatcc
     1681 gattagccac cgccgtcgca gccatcgcct tgctggccgg ccccgccttg gcccaggacg
     1741 tctcgtccgg ccgggattcg cagacccgca tcaaggaacg cagcggcatc cagcaggacc
     1801 agacggcgga aaccccgtcg ggatcgacga cctcggagtc catgtcgagc cagcagcaac
     1861 cgggccaggt gctttcccgt ccggccgatt gcctgcccaa cgacccgagg ccggaatgcg
     1921 gcggcaccag cgacatggtg acgcccgagc aatcggacca gcaattgggc cagaccccgg
     1981 ggtccgagcc ggacgcgtcg gaatacggcc agcccgagcg cgagcgcgag cgcgaggaca
     2041 tgccgtcccg ttgacgtgac tctggggact tgcctgccga ccgcgccagt ggaagattag
     2101 ggatccctgc gatcttccat gaggcggcgc catgatcctc gacctgcgcg acatgatcgt
     2161 cgcggcccgc gagggcggct atgccctgcc ggtgttcgag gtggcgggcg tcgccctggc
     2221 gcgggccgcc gtcgaggccg ccgccgacat ggactcccct gtcatcctgc atcccgtgcg
     2281 cgacgaggat ctgttgatgc cggccctggt ggcgctggcg aagcgggcgc cggtgccggt
     2341 gatcccggtc atcggcggca tcaccagcga ggacgacgcc gcccgcgcca tccgcctggg
     2401 cgccggcggc ctgatctgcc cc
//
LOCUS       DATIKR010000026         2310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_73266, whole genome shotgun sequence.
ACCESSION   DATIKR010000026 DATIKR010000000
VERSION     DATIKR010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73266"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..674
                     /locus_tag="VLL76_00405"
     CDS             <1..674
                     /locus_tag="VLL76_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV27974.1"
                     /translation="MHMFSREKKFYGGHGIVGAQVPIGTGLGFAHKYSADGGVCHTYL
                     GDGAVNQGQVYESFNMAALWKLPVVYVIENNKYAMGTSIERASAGTELCKRGQAYGIP
                     GEAVDGMSVPAVYEAASRALAHARSGEGPYILEMKTYRYRGHSMSDPAKYRTKEEVSK
                     MREQHDPIDTLKAKLLDGGLIDEAGLKDIDREVKQIVAEAADFSQASPEPAPAELWTD
                     VLIEA"
     gene            684..2048
                     /locus_tag="VLL76_00410"
     CDS             684..2048
                     /locus_tag="VLL76_00410"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008622412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HSV27975.1"
                     /translation="MAIEVLMPALSPTMTEGKLARWLKNEGDAVKSGEVLAEIETDKA
                     TMEMEAVEEGTLGKILVQGGTEGVAVNTPIAIILEEGENAGDLAKVPEQPVTSTPVRA
                     EEPKTAAPVPAPAQARAPEEKQYDKFVRMTVREALRDAMAEEMRRDGDVFLMGEEVGQ
                     YQGAYKVSQGLLDEFGAKRVIDTPITEMGFAGLAVGAAFAGLKPIVEFMTMNFSMQAI
                     DHVINSAAKTLYMSGGQQPCPIVFRGPNGAASRVAAQHSQDFSAWYAHCPGLKVVAPY
                     SAADAKGLLKAAIRDPNPVVVLENEILYGQTFDVPDDPDFIVPIGKAKVEREGSHVTI
                     VTYSRGVQIALQAAEMLAGEGIEAEVVNLRTIRPLDVETIVRSVQKTNRIVTVHEDWP
                     FASVSSEIAAVIMENAFDWLDAPLVRVCGADVPMPYAANLEKLYLPQPDAVVDAARRV
                     CYKK"
     gene            2061..>2310
                     /locus_tag="VLL76_00415"
     CDS             2061..>2310
                     /locus_tag="VLL76_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012643971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSV27976.1"
                     /translation="MPIEILMPALSPTMSEGTLARWLKNEGDAVKSGDVIAEIETDKA
                     TMEFEAVDEGVLGKILVPGGTAGVKVNQPIALLLEEGEK"
BASE COUNT          433 a          768 c          777 g          332 t
ORIGIN      
        1 cgatgcacat gttcagccgc gagaagaaat tctatggcgg ccacggcatc gtcggcgccc
       61 aggtgcccat cggtaccggc ctgggcttcg cccacaaata ttcggccgat ggcggcgtct
      121 gccacaccta tctgggcgac ggcgcggtca accagggcca ggtctacgaa agcttcaaca
      181 tggcggcgct gtggaagctg cccgtcgtgt acgtgatcga gaacaacaaa tacgccatgg
      241 gcacctcgat cgagcgcgcc tcggccggca ccgaattgtg caagcgcggc caggcctacg
      301 gcatccccgg cgaggcggtc gacggcatga gcgtgccggc ggtctatgaa gccgcgtcgc
      361 gcgccctggc ccatgcccgc tcgggcgagg ggccgtatat ccttgaaatg aagacctatc
      421 gctatcgcgg ccactccatg tccgatccgg ccaagtaccg gaccaaggag gaggtcagca
      481 agatgcgtga gcagcacgac cccatcgaca ctctgaaggc caagctgctg gacggcggcc
      541 tgatcgacga ggcggggctg aaggacatcg accgcgaggt caagcagatc gtcgccgagg
      601 cggcggattt ctcgcaagcc agccccgagc ccgccccggc ggagctgtgg accgacgtgt
      661 tgatcgaggc gtaggagcag acgatggcga tcgaagtatt gatgccggcg ctgtcgccga
      721 ccatgaccga gggcaagctg gcccgctggt tgaagaacga gggtgacgcg gtcaagtcgg
      781 gcgaggtcct ggccgagatc gagaccgaca aggccaccat ggagatggaa gccgtcgagg
      841 aaggcaccct gggcaagatc ctggtgcagg gcggcaccga gggcgtggcg gtcaacaccc
      901 ccatcgccat catcctggaa gagggcgaga acgccggcga cctggccaag gtgcccgagc
      961 agccggtgac ctccaccccg gtgcgcgccg aggagccgaa gaccgccgcc ccggtgccgg
     1021 cgccggccca ggcccgcgcc cccgaggaga agcaatacga caagttcgtg cgcatgaccg
     1081 tgcgcgaggc tttgcgcgac gccatggccg aggagatgcg ccgcgacggc gacgtcttcc
     1141 tgatgggcga ggaagtcggc cagtaccagg gcgcctacaa ggtgtcgcag ggcctgctgg
     1201 acgagttcgg cgccaagcgc gtcatcgaca ccccgatcac cgagatgggc ttcgccggcc
     1261 ttgccgtcgg cgcggccttc gcggggctga agcccatcgt cgagttcatg accatgaact
     1321 tctcgatgca ggccatcgac cacgtcatca actcggcggc caagacgctg tacatgtcgg
     1381 gcggccagca gccgtgcccc atcgtgttcc gcggccccaa cggcgccgcc tcgcgcgtcg
     1441 ccgcccagca cagccaggac ttctcggcgt ggtacgccca ttgccccggc ctcaaggtgg
     1501 tggcgcccta ttcggccgcc gacgccaagg gcctgctcaa ggccgccatc cgcgatccca
     1561 acccggtggt ggtgctggaa aacgagatcc tctacggcca gaccttcgac gtgccggacg
     1621 atcccgactt catcgttccc atcggcaagg ccaaggtcga gcgcgagggc agccacgtca
     1681 ccatcgtgac ctattcgcgc ggcgtccaga tcgcgctgca ggccgccgag atgctggcgg
     1741 gcgaggggat cgaggccgag gtcgtcaacc tgcgcaccat ccgcccgctg gatgtggaga
     1801 ccatcgtgcg ctcggtgcag aagaccaacc gcatcgtcac ggtgcacgag gattggccgt
     1861 tcgcctcggt gtcgtcggaa atcgccgccg tcatcatgga gaacgccttc gactggctgg
     1921 acgctccgct ggtccgcgtg tgcggcgccg acgtgcccat gccctacgcg gccaacctgg
     1981 aaaagctgta tctgccgcag cccgacgccg tggtcgatgc cgcccgtcgc gtctgctaca
     2041 agaaataagg ggagcgcgcc atgcccatcg agattttgat gcccgcgctc tcgcccacca
     2101 tgagcgaagg cacgctggcc cgctggctga agaacgaggg ggacgcggtc aagtccggcg
     2161 acgtcatcgc cgagatcgag accgacaagg ccaccatgga attcgaggcc gtggacgaag
     2221 gcgtgctggg caagatcctg gtccccggcg gcaccgccgg cgtcaaggtc aaccagccca
     2281 tcgcgctgct tctggaagaa ggcgagaagg
//
LOCUS       DATIKR010000027         4462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_73319, whole genome shotgun sequence.
ACCESSION   DATIKR010000027 DATIKR010000000
VERSION     DATIKR010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4462
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73319"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1420
                     /locus_tag="VLL76_00420"
     CDS             <1..1420
                     /locus_tag="VLL76_00420"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSV27977.1"
                     /translation="GIGLFGYFVADAARLLGLPRAGFNAVVKGLGFAIAAMLVVFILQ
                     NRAQVADALRRAADRWDWGRRMQAVTGRLADIWHVLAMGYVGAAYAVWAIPVRGGFDY
                     MLRATLLTVAILAVAGIASAMIKRAIDRAFAVSQEAKDRFPLIEARANRYLPVLHLAF
                     RSVVVAASLLAVLQAWGLETFTWITSDLGRRVIASAISIAAVLAGAALVWELVSGAIE
                     RYLGRTDGDGNTVERSARARTLLPLARNALMIALVVLVGLIVLSELGVNIAPLLAGAG
                     VIGIAIGFGSQKLVQDVITGAFILFEDTIAVGDVVKLDTHAGAVEAMSIRAIRLRDAN
                     GNVHTVPFSAVGTVVNMSREFAFAVMDVGVAYDEDTDRVTEVLKEVGADMQADPEFGP
                     QVVEPLEVLGVERFDASAVVIRARFKTQPLKQWAVMREFNRRMKKRFDALGIEIPFPQ
                     TTVWIGKDKAKAEYVLPETVGA"
     gene            complement(1562..2098)
                     /locus_tag="VLL76_00425"
     CDS             complement(1562..2098)
                     /locus_tag="VLL76_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HSV27978.1"
                     /translation="MAKAPAKITPGYLENAALHYLERFASSSANLRRVLMRKVDRSLA
                     HWGGERETAAAQVDSVVAKLAGLGYVDDAAYAAMKVRSLNRQGKGTRMIRAALSAKGV
                     AADHADAALSALAEDLGEPDFDAAIRLARKRRLGPFRPEANRAEMRQKDLAALARAGF
                     DFATARRVIEAASEEELD"
     gene            2134..2946
                     /locus_tag="VLL76_00430"
     CDS             2134..2946
                     /locus_tag="VLL76_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV27979.1"
                     /translation="MTDDRSITIAQPRVYGAFNWLGFRTLFLKEVRRFLKVYFQTIVA
                     PMVTTLLFLAVFALALGRVAAEVKGVPFIEFLAPGLIMMAMVQNAFANTSSSIIIAKV
                     QGNIVDMLMPPLSPTEQTVAVAAGGVARGLAVGVAVTAAMAVFVPVSLAHPGYVLFHA
                     VMGSLMLSLLGMMGGIWADKFDHMAAVTNFIVTPLSFLSGTFYSIERLPEGFHAFALA
                     NPFFYMIDGFRYGFIGSADGSPLTGLLVVGLADLVLFAATWRMLATGYKLKA"
     gene            3081..4253
                     /locus_tag="VLL76_00435"
     CDS             3081..4253
                     /locus_tag="VLL76_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV27980.1"
                     /translation="MFPVVMPTYTRADVAFERGEGAYIWSTDGRRFLDFGSGVAVTSL
                     GHCHPRLVKALQEQAAKLWHTSNLYRVPGQEKVAAKLVERTFADTVFFCNSGAEANEA
                     AIKMARKYHYERGDKQKNRIICATGAFHGRTLATIAAGGQEKHLKGFDPVAEGFDHVP
                     YGNLNALRAAITGQTAAILVEPVQGEGGIHVGDPDYLQRLRATADEFGLLLIFDEVQT
                     GMGRTGALFAYEHAGVTPDIMPVAKGLGGGFPVGACLATAEAASGMTAGTHGSTFGGN
                     PLAMAAAEAVIDVLTEPGFMDRVNANARILRDGVEAVCAKHPAVVEQVRGVGMMLGIK
                     CRIPNTELQGKLLQNGMLTVGAGDNVVRLLPPLIIGAQEIEEALGILSRTLSEVTP"
     gene            4250..>4462
                     /locus_tag="VLL76_00440"
     CDS             4250..>4462
                     /locus_tag="VLL76_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HSV27981.1"
                     /translation="MTASPARARAGQIRHFLDLDRFDSATLRRILDLGAAYKRGEQPH
                     GAAKPLDGKLLAMIFEKPSTRTRVSFE"
BASE COUNT          651 a         1531 c         1513 g          767 t
ORIGIN      
        1 cggcatcggc ctgttcggct atttcgtggc cgacgcggcc cgtctgctgg gcctgccccg
       61 ggcgggcttc aacgccgtgg tcaagggcct ggggttcgcc atcgccgcca tgctggtggt
      121 gttcatcctg cagaaccgcg cccaggtggc cgacgccctg cgccgcgccg ccgaccgctg
      181 ggactggggc cgccgcatgc aggcggtgac cggccgcctg gccgacatct ggcacgtgct
      241 cgccatgggc tatgtgggtg ccgcctatgc ggtgtgggcg atcccggttc ggggcggctt
      301 cgactacatg ctgcgcgcca ccctgctgac ggtggcgatc ctggcggtgg ccggcatcgc
      361 ctcggccatg atcaagcgcg ccatcgaccg cgccttcgcc gtcagccagg aggccaagga
      421 ccgtttcccg ctgatcgagg cccgcgccaa ccgctatctg ccggtgctgc atttggcctt
      481 ccgctcggtg gtggtggcgg ccagcctgct ggcggtgttg caggcctggg gcctggagac
      541 cttcacctgg atcacctcgg atctgggccg gcgggtgatc gcctcggcca tcagcatcgc
      601 cgccgtgctg gccggtgccg ccctggtgtg ggaactggtg tcgggcgcca tcgagcgcta
      661 tctcggccgc accgatggcg acggcaacac ggtggaacgc tcggcccgtg cccgcaccct
      721 gctgccgctg gcgcgcaacg ctctgatgat cgccctggtg gtgctggtcg gcctgatcgt
      781 gctgtcggaa ctgggcgtca acatcgcgcc gctgctggcc ggcgccggcg tcatcggcat
      841 cgccatcggc ttcggttcgc agaagctggt ccaggacgtc atcaccggcg ccttcatcct
      901 gttcgaggac accatcgcgg tgggcgacgt ggtcaagctc gacacccatg ccggcgccgt
      961 cgaggccatg agcatccgcg ccatccgcct gcgcgacgcc aacggcaacg tccacacggt
     1021 cccgttcagc gcggtgggca ccgtcgtcaa catgagccgc gaattcgcct tcgcggtgat
     1081 ggatgtgggc gtcgcctatg acgaggacac cgaccgtgtc accgaggtgc tgaaggaggt
     1141 cggcgccgac atgcaggccg atcccgaatt cggcccgcag gtagtggagc cgctggaggt
     1201 gctgggcgtc gagcgcttcg acgcctcggc ggtggtcatc cgcgcccgct tcaagaccca
     1261 gccgctgaag caatgggcgg tgatgcgcga gttcaaccgg cgcatgaaga agcgcttcga
     1321 cgccctgggc atcgagatcc ccttccccca gaccacggtg tggatcggca aggacaaggc
     1381 caaggcggaa tacgtgctgc cggagacggt gggggcttaa acggcccctg cccgtcatgc
     1441 ccggacttga tccgggcatc cacgcggatc agcctaatcc attgtctctc aacgaatttt
     1501 ttgcggcgcc gcgtggatgg ccgggtcaag cccggccatg acggcaaaag cacaatgcca
     1561 tttaatccaa ttcttcttcc gaagccgcct cgatcacccg gcgggcggtg gcgaaatcga
     1621 aaccggcgcg ggccagggcg gccaggtcct tctggcgcat ctcggcgcgg ttcgcctcgg
     1681 ggcggaacgg gccgaggcgg cgtttgcggg ccaggcggat ggcggcgtcg aaatcgggtt
     1741 cgcccagatc ctcggccagg gcggacagcg ccgcgtcggc atggtcggcg gcgacgccct
     1801 tggccgacaa ggcggcgcgg atcatgcggg tgcccttgcc ctggcggttg aggctgcgca
     1861 ccttcatggc ggcataggcg gcgtcgtcca catagcccaa gcccgccagc ttggcgacca
     1921 ccgaatcgac ctgggcggcg gcggtttcgc gttcgccgcc ccaatgggcc agcgagcggt
     1981 cgaccttgcg catcagcacc cgccgcaggt tcgcgctgga cgaggcgaag cgttcgaggt
     2041 aatgcagcgc tgcattctcg aggtagccgg gggtgatctt ggcgggcgcc tttgccatgc
     2101 cgggcactgt acccacaacc gattggcggc gccatgaccg acgatagaag catcaccatc
     2161 gcccagcccc gcgtctacgg cgcgttcaac tggctcggct tccgcaccct gttcctcaag
     2221 gaggtgcggc gcttcctcaa ggtctatttc cagaccatcg tcgccccgat ggtgaccacc
     2281 ctgctgttcc tggcggtgtt cgccctggcg ctgggacggg tcgcggccga ggtcaagggc
     2341 gtgcccttca tcgaattcct ggcgcccggc ctgatcatga tggcgatggt gcagaacgcc
     2401 ttcgccaaca cctcgtcgtc gatcatcatc gccaaggtcc agggcaacat cgtcgacatg
     2461 ctgatgccgc ctttgtcgcc caccgagcag acggtggcgg tggcggccgg cggcgtggcg
     2521 cgcgggctgg cggtgggtgt cgcggtgacg gcggccatgg cggtgttcgt gccggtgtcg
     2581 ctggcccatc ccggttatgt gctgttccac gcggtgatgg gctcgctgat gctgtcgctg
     2641 ctgggcatga tgggcggcat ctgggccgac aagttcgacc acatggcggc ggtgaccaac
     2701 ttcatcgtca cgccgctgtc gttcctgtcg ggcaccttct attccatcga gcgcctgccc
     2761 gagggcttcc acgccttcgc cctggcgaac ccgttcttct acatgatcga cggcttccgc
     2821 tacggcttca tcggcagcgc cgacggctcg ccgctgaccg gcctgctggt ggtgggcctg
     2881 gccgacctgg tgctgttcgc ggccacctgg cggatgctgg cgacgggcta caaacttaaa
     2941 gcctaaatct tgggcattcc cctcgaccgt tgacattttc ggccgggccg gggatattcc
     3001 cgcctttcct tcagcgcgcc gcaatccttc gtccgttgga gacgaggcca tccggcgttc
     3061 catgttggga gggctaacca gtgtttcctg tcgtcatgcc gacctatacg cgggccgacg
     3121 tcgcgttcga acgcggcgag ggcgcctata tctggtcgac cgacgggcga cgattcctgg
     3181 atttcggctc gggcgtggcg gtgacgtcgc tcggccattg ccatccccgg ctggtcaagg
     3241 cgctgcagga gcaggcggcg aagctgtggc acacctcgaa cctgtaccgc gtgccggggc
     3301 aggagaaggt ggcggccaag ctggtcgagc gcaccttcgc cgacaccgtg ttcttctgca
     3361 attccggcgc cgaggccaac gaggccgcca tcaagatggc gcgcaagtat cattacgagc
     3421 gcggcgacaa gcagaagaac cgcatcatct gcgccacggg ggccttccac ggccgcacgc
     3481 tcgcgaccat cgccgccggc ggccaggaga agcacctcaa gggcttcgac ccggtggcgg
     3541 aaggcttcga ccacgtcccc tacggcaacc tcaatgcgct gcgtgccgcc atcaccgggc
     3601 agaccgccgc catcctggtg gaaccggtgc agggcgaggg cggcatccat gtgggcgacc
     3661 ccgattacct gcagcggctg cgcgccaccg ccgacgagtt cgggctgctg ctgatcttcg
     3721 acgaggtcca gaccggcatg ggccgcaccg gcgccctgtt cgcctatgag catgccggcg
     3781 tcacgcccga catcatgccg gtggccaagg gcctgggtgg cggcttcccg gtcggcgcct
     3841 gcctggccac cgccgaggcg gcctcgggca tgacggccgg cacccacggc tcgaccttcg
     3901 gcggcaaccc gctcgccatg gcggcggccg aggccgtcat cgacgtgctg accgagccgg
     3961 gtttcatgga ccgggtcaac gccaacgccc gcattctgcg tgacggcgtc gaggcggttt
     4021 gcgccaagca tccggccgtg gtcgagcagg tgcggggcgt cggcatgatg ctgggcatca
     4081 aatgccgcat ccccaatacc gagctgcagg gcaagctgct gcaaaacggc atgctgaccg
     4141 tgggcgccgg cgacaacgtc gtgcgcctgc tgccgccgct catcatcggc gcccaggaga
     4201 tcgaggaagc cctcggcatc ctgtcgcgca ctctgtccga ggtgacgcca tgaccgcttc
     4261 ccccgcccgc gcccgggccg ggcagatccg gcacttcctt gatttggacc ggttcgacag
     4321 cgccaccctg cgccgcatcc tcgatctggg cgccgcctac aagcgcggcg aacagcccca
     4381 cggcgccgcc aagccgctgg acggcaagct gctggccatg atcttcgaga agccctcgac
     4441 ccgcacccgc gtgtcgttcg ag
//
LOCUS       DATIKR010000028         3592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_157906, whole genome shotgun sequence.
ACCESSION   DATIKR010000028 DATIKR010000000
VERSION     DATIKR010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3592
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157906"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..649)
                     /locus_tag="VLL76_00445"
     CDS             complement(<1..649)
                     /locus_tag="VLL76_00445"
                     /inference="COORDINATES: protein motif:HMM:NF023240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3333 domain-containing protein"
                     /protein_id="HSV27982.1"
                     /translation="MTDTKHLKRRYAAERRFKAYGIGAIALALGFLAILLVTIFSNGA
                     TAFVQTKIHLDVTFDAAEMGLGEDRSPDALASANYLALVRNAIAARFPAVETRSAKRE
                     LAGLLSQGAEDDLRKLVRSDPAIIGTTRKVALLASDDVDMAVKGHGSRLTEQQTAWLA
                     ELEKQDAARLSFNDRLFTSGDSREPEQAGLWGAIVGSFFSLSVTLLVCFPLGVATA"
     gene            complement(642..2018)
                     /gene="pstC"
                     /locus_tag="VLL76_00450"
     CDS             complement(642..2018)
                     /gene="pstC"
                     /locus_tag="VLL76_00450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HSV27983.1"
                     /translation="MQLLTLTAVLLLLTAIGYRLGRGRALALADGRPRNLHSLPRYHG
                     YYVAMWCGVPALLIVTAWLALEPSVIRHLVLTSLPAELQAASGERLALVFNEVRLVAN
                     FGKTASDPAIATAAEHYAGLQRIGFAAMTALALAAATGGLAYARAWISRDMRARNRVE
                     RLVTVFLVACASMAILTTIGIVLSLLFESLRFFQAVPVTEFLFGLNWSPQTAMRADQV
                     GSSGSFGAVPLFAGTLLISGIAMVVAVPLGLLSAVYMAEYANPKFRAVVKPLLEVLAG
                     IPTVVYGFFAALTVAPFLRDVGASLGLSVASESALTAGLVMGVMIIPFVSSLSDDVIT
                     AVPKSLREGSYGLGATKSETIKQVVLPAALPGIVGGVLLAVSRAIGETMIVVMAAGLA
                     ANLTANPFAAVTTVTVQIVTLLVGDQEFDSPKTLAAFALGLVLFCVTLALNVVALHVV
                     NKYREKYD"
     gene            complement(2118..3146)
                     /locus_tag="VLL76_00455"
     CDS             complement(2118..3146)
                     /locus_tag="VLL76_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HSV27984.1"
                     /translation="MNKTLAVAAVALATAVSAGAAQARDQIRIVGSSTVYPFTTAVAE
                     QFGKAGKFKTPVVESTGTGGGMKLFCAGIGPDHPDLTNASRRIKVSEVEQCAKNGVPD
                     VVEMKVGYDGIAFANSKKTKQVTVTREQIYLALAKEIPQNGKLVANPYKTWNQIDASL
                     PNAKIEVLGPPPTSGTRDSFNEMVMEGGCKKHLPMTALALEGKALDKACMTIREDGAY
                     VEAGENDNLIVQKLDANPAAFGVFGFSFLDQNSDKIQGSLVDGVEPTFDTIAAGKYPV
                     SRAMYVYAKKAHVGTIPGIKEFLAEYTSEKAWGKNGYLSDKGLIPMVDAERKEWAAKI
                     NGLEALKM"
     gene            complement(3293..>3592)
                     /locus_tag="VLL76_00460"
     CDS             complement(3293..>3592)
                     /locus_tag="VLL76_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HSV27985.1"
                     /translation="FNPATPLDYLKYVLDKVDMVLLMSVNPGFGGQSFIESQLEKIAR
                     IKKMIGNRNIELQVDGGVTAENSQKVIAAGATCLVAGSAVFKTKDYAANIAAIRG"
BASE COUNT          612 a         1134 c         1257 g          589 t
ORIGIN      
        1 cggcggtggc gacaccaagc gggaagcaca ccagcagcgt caccgacagc gagaagaacg
       61 agccgacgat ggcgccccac aggccggcct gttccggctc acgcgagtcg cccgaggtga
      121 acaggcggtc gttgaaggac agccttgccg cgtcctgctt ttccagctcg gccagccagg
      181 cggtctgctg ctcggtcagg cgcgagccgt ggcccttgac cgccatgtcc acgtcgtcgg
      241 acgccagcag cgccaccttg cgggtggtgc cgatgatggc cgggtccgag cgcaccagct
      301 tgcgcaggtc gtcctcggcg ccctgcgaca gcaggcccgc cagctcgcgc ttggccgaac
      361 gggtctcgac ggcggggaac ctggcggcga tggcgttgcg caccagcgcc aggtagttgg
      421 ccgaggccag ggcgtcgggc gagcggtcct ctcccaggcc catctcggcg gcgtcgaagg
      481 tgacgtcgag atggatcttg gtctgcacga aggcggtggc gccgttcgag aagatcgtga
      541 ccaaaaggat cgccaggaac cccaaggcaa gggcgatggc gccgatgccg taggccttga
      601 accggcgctc tgcggcgtag cggcgcttga ggtgcttggt gtcagtcata tttttcacgg
      661 tatttgttga cgacgtgaag ggcgacgacg ttgagcgcca gggtgacgca gaacagcacc
      721 agacccaggg cgaaggcggc cagcgtcttg gggctgtcga attcctgatc gcccaccagc
      781 agggtgacga tctgcaccgt cacggtggtc acggcggcga acgggttggc ggtcaggttg
      841 gcggccaggc cggcggccat gaccacgatc atggtttcgc cgatggcgcg cgacaccgcc
      901 agcagcacgc cgccgacgat gccgggcagg gcggcgggca gcaccacctg cttgatggtc
      961 tcggacttgg tggcgcccag gccgtacgag ccttcgcgca gcgacttggg cacggcggtg
     1021 atgacgtcgt cggacagcga cgacacgaac gggatgatca tcacgcccat caccaggccg
     1081 gcggtcagcg cgctttccga cgccaccgac aggcctagcg acgcgccgac gtcgcgcagg
     1141 aacggcgcca ccgtcagcgc cgcgaagaag ccgtagacca cggtcgggat gccggccagg
     1201 acttccagca gcggcttgac gacggcgcgg aacttggggt tcgcgtattc cgccatgtag
     1261 acggccgaca acaggcccaa gggcaccgcc acgaccatgg cgatgcccga gatcagcagc
     1321 gtgccggcga acagcggcac cgccccgaac gatccggaac tgccgacctg gtcggcgcgc
     1381 atggcggtct gggggctcca gttcaggccg aacaggaatt cggtcaccgg caccgcctgg
     1441 aagaagcgca gcgattcgaa cagcagcgac agcacgatgc cgatggtggt caggatcgcc
     1501 atcgaggcgc aggccaccag gaacaccgtg accaacctct cgacccggtt gcgggcgcgc
     1561 atgtcgcggc tgatccaggc gcgggcatag gcgagcccac cggtggcggc ggccagggcc
     1621 agcgccgtca tggctgcgaa gccgatgcgc tgcaggccgg cgtaatgttc ggcggcggtt
     1681 gcgatggcgg ggtccgaggc ggtcttgccg aaattggcga ccagccggac ctcgttgaac
     1741 accagcgcca ggcgttcgcc cgaagccgcc tgcaattcgg ccggcagcga cgtcagcacc
     1801 agatggcgga tgaccgaagg ctccagcgcc agccaggcgg tgacgatcag caaagcagga
     1861 acgccgcacc acatggcgac gtaatagcca tgatagcgcg gcagcgaatg caggttccgg
     1921 ggcctgccgt cggccagggc cagcgcccgg ccgcgcccga ggcgatagcc gatggccgtc
     1981 agcagcagaa gcacggccgt cagggtgagc aattgcatca gggcaatccc gatctcaaat
     2041 caacgtccac aggtccatcc gcccccacca tggatccccg ctttcgcggg gatgacgatg
     2101 gtgggggcgg ggctggacta catcttcagg gcttcaaggc cgttgatctt ggcggcccat
     2161 tccttgcgct cggcatcgac catggggatc aggcccttgt cggacagata gccgttcttg
     2221 ccccaggcct tttccgaggt gtactcggcc aggaattcct tgatgcccgg gatggtgccg
     2281 acgtgggcct tcttggcgta gacgtacatg gcgcgcgaca ccgggtactt gccggcggcg
     2341 atggtgtcga aggtcggctc gacaccgtcc accaggctgc cctggatctt gtccgagttc
     2401 tggtcgagga agctgaagcc gaacacgccg aaggcggccg ggttggcgtc gagcttctgg
     2461 acgatcaggt tgtcgttctc gccggcttcc acataggcgc cgtcctcgcg gatggtcatg
     2521 caggccttgt ccagcgcctt gccctcaagg gccagggcgg tcatcggcag gtgcttcttg
     2581 cagccgcctt ccatcaccat ctcgttgaac gagtcgcggg tgcccgaggt cgggggcggg
     2641 cccagcacct cgatcttggc gttcggcagc gaggcgtcga tctggttcca ggtcttgtac
     2701 ggattggcga ccagcttgcc gttctgcggg atctccttgg ccagggccag gtagatctgc
     2761 tcgcgggtga cggtgacctg cttggtcttc ttggaattgg cgaaggcgat gccgtcgtag
     2821 ccgaccttca tctcgacgac gtcgggcacg ccgttcttgg cgcattgctc gacttccgac
     2881 accttgatgc ggcgcgacgc gttggtgagg tccggatgat ccgggccgat gccggcgcag
     2941 aacagcttca tgccgccgcc ggtgccggtc gattccacca ccggggtctt gaacttgccg
     3001 gccttgccga actgctcggc gacggcggtg gtgaagggat agaccgtcga cgagccgacg
     3061 atgcggatct ggtcgcgagc ctgggcggcg ccggcagaga cggcggtggc aagggcaacg
     3121 gccgcgacgg ccagggtctt gttcatctgg tcctctccaa tcgtacgaaa acgatgaagc
     3181 ggaccttaac gacgcattgt tacagcgccg cgatggaacg atgaaggttt tgtgacagtg
     3241 tcataatcgg ggcgacggga tggcgccgcg gcggcgccac cccaagcgcg actcagcccc
     3301 ggatcgccgc gatgttggcg gcgtagtcct tggtcttgaa cacggccgag ccggccacca
     3361 ggcaggtggc gccggcggcg atgaccttct gcgagttctc ggcggtgacg ccgccgtcga
     3421 cctgcagctc gatgttacgg ttgccgatca tcttcttgat gcgggcgatc ttctcgagct
     3481 ggctctcgat gaagctctgg ccgccgaagc cggggttgac gctcatcagc agcaccatgt
     3541 cgaccttgtc caggacgtac ttgaggtagt cgagcggggt ggccgggttg aa
//
LOCUS       DATIKR010000029         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_206285, whole genome shotgun sequence.
ACCESSION   DATIKR010000029 DATIKR010000000
VERSION     DATIKR010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206285"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..447
                     /locus_tag="VLL76_00465"
     CDS             94..447
                     /locus_tag="VLL76_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006913338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV27986.1"
                     /translation="MEYATTLFAALSDPIRLRSLALIAKQGEVCVCELVHALQAAQPK
                     ISKHLAILRDAGLVRDRRDAQWVHYSLSPDLPPWARDVVAAAIAGGSATPIHAEDLAR
                     LGTMPARPAKGERHA"
     gene            440..1405
                     /locus_tag="VLL76_00470"
     CDS             440..1405
                     /locus_tag="VLL76_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HSV27987.1"
                     /translation="MLEAFTRLADWVAYDALALDRATKLADAVHFFVEDTTKIFFLLF
                     VIVFVMAFFRSMLAPEKVRGYIEGRSRGVGYTLAALLGAVTPFCSCSSVPLFIGFLEA
                     GIPVGVTMAFLITSPMVNQVAVVILASIVGWQMTAIYVAAGIGMGIVGGFAIDRFRME
                     RYVEDYVWKIRMGELAQVEIDTTLRGRTRYAWDQATEMVRRVWLYIFIGIGIGAGLHG
                     YVPAEFFATHAGPDNPLAVPLAVLVGLPLYSNITGIIPVAEALLHKSLPIGTVIAFMM
                     SVVAISPPEFIILRKVLKPQMLLFFATFLSIAFVLVGYLLNALFT"
     gene            1420..1656
                     /locus_tag="VLL76_00475"
     CDS             1420..1656
                     /locus_tag="VLL76_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSV27988.1"
                     /translation="MKAFKVLGSGCKNCVTTAKLIEDKAKAMGIEVEIEKVTDMAAIL
                     GHGVMSTPGVVLDGKVVHAGGIPTPDKVEGWLRG"
BASE COUNT          281 a          620 c          567 g          347 t
ORIGIN      
        1 ccccgaccac atcaccccgg tgcaggacag cctgttcgtg gtgtagccgc ttattccttt
       61 ggagggatat gccattcgtg gtatattccc tccatggaat acgcaacgac cctgttcgcc
      121 gccctctccg atcctattcg cctgcgcagc ctggcgctga tcgcgaagca gggcgaagtt
      181 tgcgtctgcg agctggtgca cgccctgcag gcggcccagc ccaagatttc caagcacctt
      241 gccatcctgc gcgacgccgg cctggtccgt gaccgccgcg atgcgcaatg ggtgcattat
      301 tcgctgtcgc ccgacctgcc gccctgggca cgggacgtgg tggcggccgc catcgcgggc
      361 gggtccgcga cgccgatcca cgccgaggat ttggcgcggc tcggcaccat gccggcccgt
      421 ccggccaagg gggaacgcca tgcttgaagc cttcacccgc ctcgccgatt gggtcgccta
      481 cgacgccctc gccctcgacc gcgccaccaa gctggccgac gccgtccatt tcttcgtcga
      541 ggacaccacc aagatcttct tcctgctgtt cgtcatcgtc ttcgtgatgg cgttcttccg
      601 cagcatgctg gcgccggaaa aggtgcgcgg ctacatcgag ggccgttcgc gcggggtcgg
      661 ctacaccctg gccgccttgc tgggcgcggt gaccccgttc tgctcgtgct cgtcggtgcc
      721 gctgttcatc ggcttcctcg aggccggaat cccggtgggc gtcaccatgg cgttcctcat
      781 cacctcgcct atggtcaacc aggtggccgt cgtcatcctg gcgtccatcg tcggctggca
      841 gatgaccgcg atctatgtgg cggccggcat cgggatgggc atcgtcggcg gcttcgccat
      901 cgaccgcttc cgcatggagc gctacgtcga ggactacgtc tggaagatac gcatgggcga
      961 actggcgcag gtggaaatcg acaccacgct gcgcggccgc acccgctatg cctgggacca
     1021 ggcgaccgag atggtgcggc gggtgtggct gtacatcttc atcggcatcg gcatcggcgc
     1081 aggcctgcac ggctatgtcc ccgccgagtt cttcgccacc catgccggcc ccgacaatcc
     1141 gctggcggtg ccgctggcgg ttctggtggg cctgccgctc tattccaaca tcacgggcat
     1201 catcccggtc gccgaagcgc tgctgcacaa gagcctgccc atcggcaccg tcatcgcctt
     1261 catgatgagc gtcgtcgcca tctcgccgcc ggaattcatc atcctgcgca aggtgctgaa
     1321 gccgcagatg ctgctgttct tcgccacctt cctgtcgatc gccttcgtgc tggtcggcta
     1381 tctgctcaac gcgttgttca cctgacaggg gagactgcca tgaaagcgtt caaagtcctg
     1441 ggttccggct gcaagaactg cgtcaccacc gccaagctga tcgaggacaa ggccaaggcg
     1501 atgggcatcg aggtcgagat cgagaaggtc accgacatgg ccgccatcct gggccatggc
     1561 gtcatgagca cgcccggcgt ggtgctggac ggcaaggtcg ttcacgccgg cggcatcccg
     1621 acccccgaca aggtcgaggg ctggctgcgc ggctgattcc cccttcgtca tccccgcgca
     1681 ggcggggatc catggaagcc gcgaaaaatg cggtgggaca atgggttgcg accaagccgg
     1741 acggacgcat ggacccccgc cttcgcgggg gtgacgattt ttggctgtgc gtcgcagcct
     1801 gctagaacct acacc
//
LOCUS       DATIKR010000030         4116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_61214, whole genome shotgun sequence.
ACCESSION   DATIKR010000030 DATIKR010000000
VERSION     DATIKR010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4116
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61214"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VLL76_00480"
     CDS             <1..489
                     /locus_tag="VLL76_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSV27989.1"
                     /translation="QLVYYRGLGECRAGKWTSDPDRLLAQLRSVACLGGETQIHKVLA
                     HAIAETKKTRVNALVFVGDCMEEDVDSLCTLAGELGVLGVPIFLFHEGDNAVAARAFR
                     QMAKLSGGACCGFNASSASQLRDLLSAVAVFAAGGRKALMDYGKRQGGLVLQLTDQMG
                     RS"
     gene            599..1516
                     /locus_tag="VLL76_00485"
     CDS             599..1516
                     /locus_tag="VLL76_00485"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV27990.1"
                     /translation="MAVEKSREVLRLLERLAVEHLGWLMRVHSALIFPDRAEAPPCAP
                     DSPLPGLCAEACGQTDQLSGLLRQRAIMHGLAQQLLEQRAKGADPAAYQAFMAAVDAY
                     VREARRVEAHFRRELIETDPLTGVHNRQGMMREIRREWTRAMRTGRPVCVAVADLDFF
                     KHVNDTYGHLAGDKVLCLAARFFVRRLRPYDQVFRYGGEEFLFCLPDTDADTARAVLD
                     RLRGLMARVPVVLDCGTRVPVTCSIGVAQMVPGRSVQEAIAAADRALYAAKDAGRNRV
                     MVAAPPADAASPAPEVIAARLHPVGAVRH"
     gene            1552..3579
                     /locus_tag="VLL76_00490"
     CDS             1552..3579
                     /locus_tag="VLL76_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27991.1"
                     /translation="MKLARILMVAALTCSALPALAQTKALQGPAVAGGMAAGPGLAAG
                     DRLAMAQDWLKTNPDDAHTLRFAAQQLLALERYAEAADLFARADGLDPGGADSVGRAA
                     ALIRLGRMEEAREVAEAPSLAIPGERGRLAALRGVAKALVAAGEMGRARAVLDAAIAQ
                     SPREAGLLVERAALDAAAGRPLRAIPALERAVQLAPHDSTPQRTLVRAWLDAGQFKHA
                     HAAAEAARKGSLALDEQIVVADLAALQGLGEQAKAVALGEDYLKQRPRSAPVMRALAT
                     SHAALGGKDRAADLLRQALRMAPPDDAAIALLRQIIPEPERGGLLTDLRRRYPAIPAL
                     WRDDVDPPGDLAWPWREEAARLAAEGKPAAARTQLTRALAAIPERMSGQRALVLLHLA
                     ELTDEPTQALSHLAAAEKLNVPLGEVLSRRAQILLRAGWWDEASAALWAWAGLRPDDA
                     DAVAALFRPEMADRLGWARAFAQLHDHVQRDPDSPDRRLMALEAHAGTGGSPLLALAH
                     ADALAKLVPAGDPRAAQGRLLRDRVTLGLDALGNLVEANAAEGRMVIDTAEDGRIVAT
                     FHPVTGRLVRFDRQGRWIAATWSPDGLDLERIADSDGNSLTLARKDGGIQAIEAKGAV
                     NFKAEIGKDGSPVITTRGDSGAAVEAYNAALALLTSWPRTGLAGARWLKVF"
     gene            complement(3791..>4116)
                     /locus_tag="VLL76_00495"
     CDS             complement(3791..>4116)
                     /locus_tag="VLL76_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSV27992.1"
                     /translation="KASVKLAAARGRDDDEDRGSGDADPTSWSVQVGAFAEYKPARSA
                     AAAAAKKLGGLVAHANVDVDKAKQGKQVLYRARLTGFTEDEARAACKKLKKAKKACAV
                     VQPAA"
BASE COUNT          556 a         1485 c         1473 g          602 t
ORIGIN      
        1 caactggtct attaccgggg cctgggcgag tgccgcgccg gcaagtggac ctcggacccc
       61 gaccgcctgc tggcgcaatt gcgcagcgtt gcctgcctgg gcggcgagac gcagatccac
      121 aaggtgctgg cccacgccat cgccgagacc aagaagacgc gggtcaacgc cctggtgttc
      181 gtcggcgatt gcatggagga agacgtcgat tccctgtgca ccctggccgg tgaattgggc
      241 gtgctgggcg ttcccatctt cctgttccac gagggcgaca acgccgtcgc cgcccgcgcc
      301 ttcaggcaga tggccaagct gtcgggcggc gcctgctgcg gcttcaatgc ctcgtcggcc
      361 agccagttgc gcgacctgct gtcggcggtg gcggtgttcg ccgccggcgg gcgcaaggcg
      421 ctgatggatt acggcaagcg ccagggcggc ctggtgctgc aactgaccga ccagatgggc
      481 cgaagctgag cccgtcgggg ttaccccctc tggccgtctt cctccacctc cgcacccacg
      541 gccgtttccg ccggccatgg gataatcccg tccggatcgg caaggacgga ggtcgggcgt
      601 ggcggtcgaa aaatcccggg aagtcctgcg gttgttggag cgcttggcgg tcgagcatct
      661 cggctggctg atgcgggtcc attccgcgct gatcttcccc gatcgagccg aggcaccgcc
      721 ttgcgccccc gattcccccc tgcccggcct gtgcgccgag gcctgcggac agaccgacca
      781 gttgagcggc ctgttgcgcc aacgcgccat catgcacgga ctcgcccagc aattgctgga
      841 acagcgggcc aagggcgccg atcccgccgc ctatcaggcc ttcatggctg cggtggatgc
      901 ctatgtccgc gaggcccgcc gggtggaggc ccatttccgc cgcgagttga tcgagaccga
      961 cccgctgacc ggcgtgcaca atcgccaagg catgatgcgg gaaatccgtc gtgaatggac
     1021 gcgcgccatg cgcaccggcc ggccggtctg cgtggcggtg gccgacctcg acttcttcaa
     1081 gcacgtcaac gacacctacg gccacctggc cggcgacaag gtgctgtgtc tggcggcgcg
     1141 cttcttcgtg cgccggctgc ggccctatga ccaggtgttc cgctatggcg gcgaggaatt
     1201 cctgttctgc ctgcccgaca ccgacgcaga caccgcccgc gccgtgctcg accgcctgcg
     1261 cggactgatg gcgcgggtgc cggtggtgct ggattgcggc acgcgggtgc cggtgacgtg
     1321 ttccatcggc gtcgcccaga tggtccccgg ccgctcggtg caggaagcca tcgccgccgc
     1381 cgaccgcgcg ctgtacgccg ccaaggatgc cggccgcaac cgcgtgatgg tggccgcgcc
     1441 gccggccgat gccgcatcgc ccgcccccga ggtgatcgcc gcacggctgc accccgtggg
     1501 ggctgtgcgc cactgatcga cagagccggc cccggtcgtt aggatcaggg gatgaagctg
     1561 gctcgaatcc tgatggtcgc tgcgctgacc tgctcggcgc ttcccgcctt ggcccagacc
     1621 aaggcgctgc aaggcccggc cgtggccggc ggcatggcgg ccggtcccgg cctggctgcc
     1681 ggcgaccgtc tggccatggc ccaggactgg ctgaagacca atcccgacga cgcccacacc
     1741 ctgcgcttcg ccgcccagca attgctggcg ctggaacgct atgccgaagc cgccgacctg
     1801 ttcgcccgcg ccgacggtct ggaccccggc ggggcggatt ccgtggggcg ggccgccgcc
     1861 ctgatccggc tgggccgcat ggaggaagcg cgcgaagtgg ccgaggcgcc gtcgctggcg
     1921 atccccggcg aacggggccg tctggccgcc ctgcgcggcg tcgccaaggc tttggttgct
     1981 gccggcgaga tgggccgggc gcgggcggtg ctcgacgccg ccatcgccca atccccgcgc
     2041 gaggccggcc tgctggtgga gcgggctgcg ctcgacgccg ccgccggccg tcccctgcgc
     2101 gccatccccg cgctggaaag ggctgtgcaa ttggcgcccc acgattccac gccgcaacgg
     2161 acgctggtgc gggcgtggct cgatgccggc cagttcaagc atgcccacgc cgccgccgag
     2221 gccgcgcgca agggcagcct ggcgctggac gagcagatcg tggtcgccga cctcgcggcc
     2281 ttgcagggcc tgggcgagca ggccaaggcg gtggccttgg gcgaggatta cctcaagcag
     2341 cggccgcgct cggcgccggt gatgcgggcg ctggcaacgt cgcacgccgc cctgggcggc
     2401 aaggaccgcg ccgccgacct gctgcggcag gcgctgcgca tggcgccgcc cgacgacgcc
     2461 gccatcgcgc tgctgcgcca gatcatcccc gaacccgagc gcggcggcct gctgaccgac
     2521 ctgcgccggc gctatcccgc catcccggcg ctgtggcgcg acgacgtcga tccgcccggc
     2581 gacttggcgt ggccgtggcg ggaagaggct gcccgcctgg ccgccgaggg caagccggcc
     2641 gctgctcgca cccagctcac ccgcgccctg gccgccatcc ccgaacggat gtcgggccag
     2701 cgggcgctgg tcctgctgca tctggccgag ttgaccgacg agccgaccca ggcgctgtcc
     2761 cacctggccg ccgccgagaa gctgaacgtg ccgctggggg aagtcctgtc gcgccgtgcc
     2821 cagatcctgt tgcgcgccgg ctggtgggac gaggccagcg ccgcattgtg ggcctgggcc
     2881 ggcctgcggc ccgacgatgc cgacgcggtc gccgcgctgt tccgccccga aatggccgac
     2941 cgcctggggt gggcgcgggc cttcgcgcaa ctgcacgacc acgtccagcg cgaccccgat
     3001 tcgcccgacc gccgcctgat ggcgctggag gcccatgccg gcaccggcgg cagccccttg
     3061 ctggcgctgg cccatgccga cgcgctggcg aagctggttc ccgccggcga tccgcgcgcc
     3121 gcccaggggc gcttgctgcg tgaccgcgtc accttgggct tggacgcctt gggcaatctg
     3181 gtcgaggcca atgccgccga aggccgcatg gtgatcgaca ccgccgagga cggccggatc
     3241 gtcgccacct tccaccccgt caccggacgg ctggtccgtt tcgaccgtca gggccggtgg
     3301 atcgcggcga cgtggtcgcc cgacggcctc gacctcgagc gcatcgccga ttcggacggc
     3361 aattccctga ccttggcgcg caaggacggc ggcatccagg ccatcgaggc caagggcgcc
     3421 gtgaatttca aggccgagat cggcaaggac ggcagcccgg tcatcaccac ccgcggcgac
     3481 agcggcgcgg cggtggaggc ctacaacgcc gccctggcgc tgctgacgtc gtggccgcgc
     3541 accggactgg ccggcgcgcg gtggctgaag gtgttctgaa cggggattgg caggctgccg
     3601 aaaaactcat ccgtcccctc accgtcatcc ccgcgaaggc ggggatccat ggaggccgcg
     3661 aaagatatcg gatggacaat gggttgaggc gaagccggac ggacccatgg acccccgcct
     3721 tcgcgggggt gacgagtcgg gggcgcgccg aagctaaacc gggcagccag ttagagcggc
     3781 gagggcccta ttaagccgcc ggctggacga cggcgcaggc cttcttggcc ttcttcagct
     3841 tcttgcaggc ggcgcgggcc tcgtcctcgg tgaaaccggt gagacgggca cggtagagca
     3901 cctgcttgcc ctgcttggcc ttgtccacgt ccacattggc atgggcgacc aggccgccca
     3961 gcttcttggc ggcggcggcg gcggccgagc gggccggctt gtattcggcg aaggcgccga
     4021 cctgcaccga ccacgaggtc gggtcggcgt cgcccgaacc gcggtcctcg tcgtcgtcgc
     4081 ggccgcgagc cgcggccagc ttgacgctgg ccttgg
//
LOCUS       DATIKR010000031         3633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_206292, whole genome shotgun sequence.
ACCESSION   DATIKR010000031 DATIKR010000000
VERSION     DATIKR010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206292"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VLL76_00500"
     CDS             <1..354
                     /locus_tag="VLL76_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV27993.1"
                     /translation="LLVEDEDAVRMFGTRALRNKGYRVIEARSGEQALDVLRADEPID
                     VLISDVVMPGMDGVTLARLVRMERPAIRVILISGYSEDVARNGIDPDEGIHFLPKPFS
                     LKQLAGAVKTVMGGD"
     gene            448..1263
                     /locus_tag="VLL76_00505"
     CDS             448..1263
                     /locus_tag="VLL76_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HSV27994.1"
                     /translation="MIRIAQSFRRPRLGAIALACAVALSACSDKQEEYVERPVEELYN
                     EAMDYVDKDEYYKAAKAFEEVERQHPYSVWATKAQLMSAYALYERNRYDDALIGLDRF
                     IQLHPGNKDAPYAYYLKGLCYYEQITDVARDQKMTENAMKALQEVVDRFPASQYARDA
                     KLKVDLARDHLAGKEMNIARYYQGRKQWLAALNRYKAVTEQFQTTSHVAEALHRMVEI
                     YVTLGMDAEAERTAAVLGHNFPGSDWYEDTFALLKTGKPASAAKESGGWLGLW"
     gene            1268..2938
                     /gene="recN"
                     /locus_tag="VLL76_00510"
     CDS             1268..2938
                     /gene="recN"
                     /locus_tag="VLL76_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HSV27995.1"
                     /translation="MLVSLSIRDVVLIEKLDLAFDGGLSVFTGETGAGKSILLDSLSL
                     ALGARADSGLVRHGAAQLTVIAEFDPPAIHPARALLAEQDIDTDGQPLLLRRVVTADG
                     RSRAYVNDQAVSVGLLRKVGDELVEIHGQFDSHGLLDPTTHLPVLDAFGGLVQSRRAV
                     KAAWDAWRAARNRRTEAEALLARAKAEEEDLRHAHDELASLAPKPGEEAELAQSRAVM
                     MHGEKLLEAMNGAMAALAQRGEVEASLRSAQRLLERVADRAEGKLDGVIAALDRAAME
                     AAEAVGLLERASGEIDLDPRHLEKVEERLFALRSAARKHGVEVDGLADLMNSLARQLA
                     ALEGGGDDLARLAREEQAARAAYAEAARALSKARAEAAARLDKAVAGELPPLKLDKAT
                     FGTRVAPLDEGQWGPDGLDAVEFQVSTNPGAPAGSLGKIASGGELSRFMLALKVVLAR
                     TSSTPTMVFDEVDSGIGGAVAAAVGERLARLGEGLQVLVVTHSPQVAARGRQHYRVAK
                     RDTSMGKVATSVEQLPDAARREEIARMLAGETITDQARAAAESLMACG"
     gene            3069..>3633
                     /locus_tag="VLL76_00515"
     CDS             3069..>3633
                     /locus_tag="VLL76_00515"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HSV27996.1"
                     /translation="MEIRFPKRPLAALFFLFTALAAWFAVDRVDQLAQAVSSLRDQPF
                     AVSESLLRAHDEAFAEHAALHDAIIAPTPEARDRAVEATAAHEAALRAELMVITERYA
                     DAPRLLGPLFESLSEFRQLREQVADLLAEERNSEAHAVMASEGEAIYRRQHEAMSAIL
                     EAERRHAAELRQQAEAATETAHGASLLL"
BASE COUNT          581 a         1300 c         1227 g          525 t
ORIGIN      
        1 ctgctggtcg aggacgagga cgccgtgcgc atgttcggca ccagggcgtt gcgcaacaag
       61 ggctaccgcg tcatcgaggc gcgctcgggc gagcaggcgt tggacgtgct gcgcgccgac
      121 gaacccatcg acgtgctgat ctcggacgtg gtgatgccgg gcatggacgg cgtcaccctg
      181 gcccggctgg tccgcatgga gcgccccgcc atccgcgtca tcctgatctc gggctattcc
      241 gaggacgtcg cccgcaacgg catcgacccc gacgagggca tccacttcct gcccaagccg
      301 ttctcgctca agcaactggc cggagcggtc aagacggtca tgggtggtga ctgacgaccg
      361 tcgcaggtcc gttgcccctc ttcccctcgc atccgggcgt gctatagtcc gcgtcgtctg
      421 cgcaaaggcc tggctcgaag agtgttcatg atccgcatcg cccaaagctt ccgtcgtccg
      481 cgccttggcg cgatcgcgct cgcctgcgcc gtcgcgctgt ccgcctgttc cgacaagcag
      541 gaggaatacg tcgagcgccc cgtcgaggag ctctacaacg aggcgatgga ctacgtcgac
      601 aaggacgaat actacaaggc ggccaaggcc ttcgaggagg tcgagcgcca gcacccctat
      661 tcggtgtggg cgaccaaggc gcagttgatg tcggcctacg cgctgtatga acgcaaccgc
      721 tacgacgacg cgctgatcgg cctggaccgc ttcatccagc tgcatcccgg caacaaggac
      781 gcgccctacg cctattacct caagggtctg tgctattacg agcagatcac cgacgtggcg
      841 cgcgaccaga agatgaccga gaacgccatg aaggcgctgc aggaggtggt cgatcgcttc
      901 cccgccagcc aatacgcccg cgacgccaag ctgaaggtgg acctggcgcg cgatcacctg
      961 gccggcaagg aaatgaacat cgcccgctat taccaggggc gcaagcagtg gctggcggcg
     1021 ctgaaccgct acaaggcggt caccgagcag ttccagacca cctcgcacgt ggcggaagcc
     1081 ctgcaccgca tggtcgagat ctacgtcacc ctgggcatgg acgccgaggc cgagcgcacc
     1141 gccgccgtgc tgggccacaa cttccccggc agcgactggt acgaggacac cttcgccctg
     1201 ctcaagaccg gcaagcccgc ctcggccgcc aaggaatcgg gcggctggct ggggctgtgg
     1261 taaggccatg ctggtctcgc tgtcgatccg cgacgtcgtc ctgatcgaaa agctggacct
     1321 ggcgttcgac ggcggcctgt cggtgttcac cggcgagacc ggcgccggca agtccatcct
     1381 gctggattcg ctgagcctgg ccctgggcgc gcgggccgat tccgggctgg tgcgccacgg
     1441 cgccgcccaa ctgaccgtca tcgccgaatt cgatcccccc gccatccatc ccgcccgcgc
     1501 cctgctggcc gaacaggaca tcgacaccga cggccagccg ctgctgctgc gccgggtcgt
     1561 caccgccgac ggccgctcgc gcgcctatgt caacgaccag gcggtgtcgg tcggcctgct
     1621 gcgcaaggtc ggggacgaac tggtggaaat ccacggccag ttcgacagcc acggcctgct
     1681 cgaccccacc acccacctgc cggtgctcga cgccttcggt gggctggtcc agtcgcgccg
     1741 cgccgtcaag gcggcgtggg atgcctggcg cgccgcccgc aaccgccgta ccgaggccga
     1801 ggccctgctg gcccgcgcca aggccgagga agaggatctg cgccacgccc atgacgagct
     1861 ggcgtcgctg gcccccaagc ccggcgagga agccgaactg gcgcaaagcc gcgccgtcat
     1921 gatgcatggc gagaagctgc tggaggccat gaacggcgcc atggcggcgc tggcccaacg
     1981 cggcgaggtc gaggccagcc tgcggtccgc ccagcgtctg ctggaacgcg tcgccgaccg
     2041 cgccgagggc aagctcgacg gcgtcatcgc cgcgctcgac cgcgccgcca tggaagccgc
     2101 cgaggccgtc ggcctgctgg aacgggcctc gggcgagatc gacctcgatc cgcgccacct
     2161 ggaaaaggtc gaggagcggc tgttcgccct gcgctcggcc gcgcgcaagc atggcgtcga
     2221 ggtggacggc ctggccgacc tgatgaattc cctggcccgc cagttggccg ctttggaagg
     2281 gggcggcgac gatttggccc gcctggcgcg cgaggagcag gccgcccgcg ccgcctatgc
     2341 cgaggccgcc cgcgccctgt ccaaggcccg cgccgaagcg gccgcccggc tcgacaaggc
     2401 ggtggcgggc gagctgccgc cgctcaagct ggacaaggcc accttcggca cccgcgtggc
     2461 gccgctggac gaaggccaat ggggaccgga cggcctggat gccgtcgagt tccaggtgtc
     2521 caccaatccc ggcgcgccgg ccggctcgct gggcaagatc gcctcgggcg gcgaattgtc
     2581 gcgcttcatg ctggcgctca aggtggtgct ggcgcgcacg tcgtcgaccc ccaccatggt
     2641 gttcgacgag gtcgattccg gcatcggcgg cgccgtcgcg gcggccgtcg gcgaacggct
     2701 ggcgcggctg ggcgaaggac tgcaggtgct ggtcgtcacc cactcgcccc aggtcgccgc
     2761 gcgcggccgc cagcattacc gcgtcgccaa acgggatacc tcgatgggca aagtcgcgac
     2821 cagcgtcgag caattgcccg atgcggcccg acgcgaggaa atcgcccgca tgctggccgg
     2881 cgagaccatc accgaccagg cccgcgccgc cgccgaaagc ctgatggcct gcggctgacc
     2941 ctgtccaaac gcaatagggc ctcctccatc cgctctattc ctggcgagcg ccggaacttc
     3001 gtatcctgac tccgacgacg ccgatcgggg gagcggtggt catgcgctct gggtgggaag
     3061 ttacggcggt ggaaatacgg ttccctaagc ggccgctcgc ggccctgttc tttctgttta
     3121 cggctttggc cgcatggttc gcggtcgacc gcgtcgatca gctggcccag gcggtgtcga
     3181 gcctgcgcga ccagcccttc gcggtgtccg aaagcctgct gcgcgcccat gacgaggcct
     3241 tcgccgaaca cgccgccctg cacgacgcca tcatcgcccc cacccccgag gcccgcgacc
     3301 gcgccgtcga ggcgaccgcc gcgcacgagg ccgccctgcg ggccgaactg atggtgatca
     3361 cggagcgtta tgccgacgca ccccgtttgt tggggccgct gttcgagtcc ctcagcgaat
     3421 tccgccaatt gcgggaacag gtcgccgatc tgctggccga ggagcgcaac agcgaggcgc
     3481 acgccgtcat ggccagcgag ggcgaggcca tctatcgccg ccagcacgag gccatgtcag
     3541 ccatcctgga ggccgagcgc cgccacgccg ccgagttgcg gcagcaggcc gaggccgcca
     3601 ccgagaccgc ccacggcgcc tcgctgctgc tgg
//
LOCUS       DATIKR010000032         1667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_24819, whole genome shotgun sequence.
ACCESSION   DATIKR010000032 DATIKR010000000
VERSION     DATIKR010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24819"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="VLL76_00520"
     CDS             complement(<1..1023)
                     /locus_tag="VLL76_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HSV27997.1"
                     /translation="MSDPFALDDDIPNPFQPAPPRPAVGPIAVPADAPWLRGLNPEQH
                     EAVTTTDGPVLVLSGAGTGKTKVLTARLAHILAGKRAQPWQILAVTFTNKAAREMKDR
                     VFGLVGPVAEGVWLGTFHALCVRILRRHAEVVGLKSNFTILDSDDQLRLLKQVMEAER
                     VDSKKWPAQALMSTIQRWKDRGIAPDKLTAEHDSEFAGGKAQALYGLYQERLKTLNAC
                     DFGDLLLHNLTLFLTQPEVLASYQEQFRYILVDEYQDTNVAQYLWLRLLAQKHKNICC
                     VGDDDQCLAKGTLVTMADGTTKPIEAVKPGDMVLSSHGSGDFRGAAVVQTYRHRRKAT
                     MVRIRTA"
     gene            1079..>1667
                     /locus_tag="VLL76_00525"
     CDS             1079..>1667
                     /locus_tag="VLL76_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSV27998.1"
                     /translation="MDTLILTVFLLTYVGMALGRVPGLRVDRTGIALLAVVVLLAAER
                     VDVQAVGQAVDVPTLLLLFALMLVSSQFQAAGIYTWVASRVAAATGNADRLLMVTIAV
                     AGGLSAVLANDIVVFAMTPIVAEGISRRGVDPRPYLLALAGAANAGSAMTIIGNPQNI
                     LIGQVGGLDFWKFLLACGVPGLAGLVVVYFTVRWVW"
BASE COUNT          239 a          540 c          580 g          308 t
ORIGIN      
        1 agccgtgcgg atgcgcacca tcgtggcctt ccggcgatgg cggtaggttt ggacgacggc
       61 ggcaccccgg aagtcgccgc tcccgtgcga cgacaacacc atgtcacctg gtttcaccgc
      121 ctcgatgggc ttggtggtac cgtcggccat ggtgaccagc gtgcctttgg caaggcattg
      181 atcgtcatcg ccgacgcagc agatgttctt gtgcttctgg gccagcaggc gcagccacag
      241 atactgggcg acgttggtgt cctggtattc gtcgaccagg atgtagcgga actgctcctg
      301 gtacgacgcc agcacctcgg gctgggtcag gaacagagtc aggttgtgca gcaacaggtc
      361 gccgaagtcg caggcattca gcgtcttcag gcgttcctgg tacagcccat acagcgcctg
      421 cgccttgccg ccggcgaatt cgctgtcgtg ctcggcggtc agcttgtcgg gggcgatgcc
      481 gcgatccttc cagcgctgga tggtgctcat cagcgcctgg gccggccatt tcttggaatc
      541 gacccgctcg gcctccatca cctgcttgag caggcgcaac tggtcgtcgg aatccaggat
      601 ggtgaagttg gacttcagcc ccacgacctc ggcatggcgg cgcaggatgc gcacgcacag
      661 ggcatggaag gtgcccagcc acacgccctc ggccaccggc ccgaccagac cgaacacgcg
      721 atccttcatc tcgcgcgccg ccttgttggt gaaggtcacc gccaggatct gccagggctg
      781 cgcccgcttg cccgccagga tgtgggccaa ccgcgcggtc agcaccttgg tcttgccggt
      841 gccggcacct gacagcacca gcacggggcc gtcggtggtg gtcaccgcct cgtgctgttc
      901 cgggttcagc ccgcgcagcc acggcgcgtc ggcgggcacg gcgatgggtc cgaccgccgg
      961 gcgcggcggc gccggctgga acgggttcgg gatgtcgtcg tcgagagcga agggatcgga
     1021 catgggcgga atatagtagg aactttcggc aaaggcgaca cctcgctatc ctatgcccat
     1081 ggacacactc atcctcaccg tcttcctgct cacctatgtc ggcatggcct tgggtcgtgt
     1141 gccggggctg cgcgtcgacc gcaccggcat cgcgttgctg gcggtggtgg tgctgctggc
     1201 ggcggaacgg gtggacgtcc aggcggtcgg gcaggcggtg gacgtgccga ccctgctgct
     1261 gctgttcgcg ctgatgctgg tgtcgagcca gttccaggcg gcgggcatct acacctgggt
     1321 ggcctcgcgg gtggcggcgg cgacgggcaa tgccgaccgc ctgctgatgg tgaccatcgc
     1381 ggtggcgggc ggcctcagcg ccgtgctcgc caacgacatc gtggtgttcg ccatgacccc
     1441 catcgtggcc gagggcataa gccgtcgcgg cgtcgatccc cggccctatc tgctggccct
     1501 ggcgggcgcc gccaatgccg gctcggccat gaccatcatc ggcaatcccc agaacatcct
     1561 gatcggccag gtgggcggcc tggatttctg gaaattcctg ctggcctgcg gcgtgccggg
     1621 gctggccggg ctggtggtgg tctatttcac cgtccgctgg gtgtggc
//
LOCUS       DATIKR010000033         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_145995, whole genome shotgun sequence.
ACCESSION   DATIKR010000033 DATIKR010000000
VERSION     DATIKR010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145995"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VLL76_00530"
     CDS             <1..591
                     /locus_tag="VLL76_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020887840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV27999.1"
                     /translation="GLTGACTAGDMGEIAQHRAPIMIAVPFLGHVFLFTILAFSVEAG
                     HLLVWPTALLVLAGLIISGFAFRELRRAGGEDRAEVKALMVFSFGWQLTALFGGLLLL
                     SGLPLSHAAMASSSALSHFGLFAALQGGLFGPEAAALIAFVFAMPFLVHPFVFFLFGR
                     GMERGGDMPRLPVYLLALVGAGGVLVALVAHAGGWF"
     gene            complement(679..>1502)
                     /locus_tag="VLL76_00535"
     CDS             complement(679..>1502)
                     /locus_tag="VLL76_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HSV28000.1"
                     /translation="VAMGITGTAVSQQAADIVLTDDNFASIEAAVEEGRRVYDNLIKS
                     LAFVLPTNLGLAFILIIAVALFPFDVVTGELLLPLLPTQILWINLVATVALALPLAFE
                     AMEPDVMARPPRDPVAPVLSGFVIQRTFVVATLMAIGAIGLFLWQYQLAVGAGQVESE
                     AIGTAQTMAVTTVILFQVFYLLNCRSLRDSVFRIGLFSNPKVFIGLGALFVLQAGFIY
                     APPMNAIFGTRPLGIDELAVAALVGAIILPVITFEKWIQARRARNGASRRVLPET"
BASE COUNT          219 a          492 c          532 g          259 t
ORIGIN      
        1 gggctcaccg gtgcgtgcac cgcgggcgac atgggcgaga ttgcgcaaca tcgggcaccg
       61 atcatgatcg ccgttccgtt cctcggccac gtcttcctgt tcaccattct cgccttcagc
      121 gtggaggcgg ggcatctcct cgtctggccg accgcgctgc tggtcctggc cgggctgatc
      181 atcagcggct tcgcctttcg ggaactgcgc cgcgccggtg gcgaggatcg cgccgaggtg
      241 aaggcgttga tggtgttttc cttcggctgg caattgacgg cgctgtttgg cggcctgctg
      301 ctgctgtcgg gcctgccgct ctcccacgca gcgatggcga gcagttccgc gctgtcgcac
      361 ttcggcctct tcgccgcgct gcagggcggc ctgttcgggc ccgaagcagc cgcgctcatt
      421 gccttcgtgt tcgcgatgcc cttcctggtg caccccttcg tgttcttcct gttcgggcgc
      481 ggcatggagc gcggcggcga catgcctcgc ctgccggtct atctcctggc gctggtcggc
      541 gccggcggcg tgctggtcgc gctggtcgcc catgctggcg gctggttctg accgaccaac
      601 ggcgtggcca tcgggcgcct gggggcctgc gtggtcgggc tcgtcactcc gtcacgggca
      661 cgatcgcttt cggcccccct acgtctcggg aagcacccgg cgtgaggcac cgttccgggc
      721 acgtcgggcc tggatccact tctcgaaggt gatgacgggc aggatgatgg cccccacgag
      781 ggccgcgacc gcgagctcgt cgatcccgag cggacgcgtc ccgaatatgg cgttcatcgg
      841 cggggcatag atgaagccgg cctggaggac gaacagggcg ccaaggccga tgaagacctt
      901 gggattgctg aacaggccga tccggaagac cgagtcgcgc agcgagcggc agttgagcag
      961 gtagaagacc tggaacagga tgacggtggt cacggccatc gtctgcgccg tgccgatcgc
     1021 ctcgctctca acctggccgg cgcccacggc cagctggtac tgccagagga agaggccgat
     1081 cgcgccgatc gccatcagcg tggcgacgac gaacgtgcgc tggatcacga agccactcag
     1141 gaccggcgcc accgggtcgc gtggcggccg cgccatcacg tccggctcca tggcctcgaa
     1201 ggccaggggc agcgcgaggg cgaccgtcgc cacgaggttg atccacagga tctgggttgg
     1261 caggaggggc aggaggagct cgccggtgac cacgtcgaag ggaaagagcg cgacggcgat
     1321 gatgaggatg aacgcgagac caaggttcgt cgggaggacg aacgccagcg acttgatcag
     1381 gttgtcgtag acccgccgac cttcctccac ggcggcctcg atgctcgcga agttgtcgtc
     1441 cgtcaggacg atgtcggccg cctgctgcga gaccgccgtg ccggtgatgc ccatcgcgac
     1501 cc
//
LOCUS       DATIKR010000034         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_133769, whole genome shotgun sequence.
ACCESSION   DATIKR010000034 DATIKR010000000
VERSION     DATIKR010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133769"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..908)
                     /locus_tag="VLL76_00540"
     CDS             complement(174..908)
                     /locus_tag="VLL76_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017299766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HSV28001.1"
                     /translation="MRLQLATWPQVEDYLTRSRAIILPIGSTEQHGPTGLVGTDALCA
                     EAVAWRVGEALGVMVAPTLPVGMAQHHMAFPGSMTLKPSTLLAVMKDCLTSLVRHGFD
                     RVLVVNGHGGNTCTIQAAFAETQMELDSLSPRPALATRLVNWWEMPEIDRLSTELFGD
                     SVGWHATPPEVALTWALHPETADPRPLEPRVAPKGMFFGAADFRASFPDGRIGSDPSL
                     ASAAAGERILAVAAAEIAAVAKGFFA"
     gene            1164..2156
                     /locus_tag="VLL76_00545"
     CDS             1164..2156
                     /locus_tag="VLL76_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009204972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HSV28002.1"
                     /translation="MSVVFTRRRVLTVLAAAAGVPLLMRAGSAQARLVKWEGTAMGAP
                     ASLSIYHTDEKHARAAIEAAVTELNRLEGIFSLYRADSAMSQLNRDGALAQAPIELVE
                     AMGLALETAAITGGAFDPTVQPLWQAYFTHFTAGSADSAGPAAEDIAAARALVGWQSV
                     AVENGTIRFERPGMGVTLNGIAQGIVTDRVAAVLRAHGLERMLVDMGEPKALSAKPDG
                     SAWVIAIADPRDPSRTITSIDAVDKAVATSGGYGTTFDAAKRFTHLIDPASGTTAPAD
                     QSVTVIADSAAKADALSTALAVAPVERHRDIIASAGGVTALFVSKDGGILRLPA"
     gene            2175..>2531
                     /locus_tag="VLL76_00550"
     CDS             2175..>2531
                     /locus_tag="VLL76_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28003.1"
                     /translation="MTAIDTDEIAVACRDLAPTPDHGELVRAARAATGLDLKLAYVDD
                     GWFRLGGVVDGSGKRLADEIEDWVVAETGGDMTELFSRYSDANLRFIRFAGRRIYLTA
                     ATGPDPLDFVQIEIDRV"
BASE COUNT          385 a          914 c          855 g          377 t
ORIGIN      
        1 gggcatgcgg cagggtggtc agcaccgcct cgccggtctc gagccggttc gaggtctcgg
       61 gatggcgcgc cagctcctgg aacagcacca gggtcttgca ttgcagggcg ttgagcttga
      121 gcgggttgat cttgggcggc atgaaggctc cttggcaaac gtcgcgatta taatcaggcg
      181 aagaagccct tcgccaccgc cgcgatttcg gccgccgcca ccgccaggat gcgctcgccc
      241 gccgccgcgc tggccagcga cgggtccgag ccgatgcggc cgtcggggaa gctggcgcgg
      301 aagtcggcgg cgccgaagaa cattcctttg ggggcgacgc gcggctccaa cggccgcggg
      361 tcggcggtct cgggatgcag cgcccaggtc agcgccacct cgggcggggt ggcgtgccag
      421 cccaccgaat cgccgaacag ctcggtcgag aggcggtcga tttcgggcat ctcccaccaa
      481 ttgaccagcc gcgtcgccaa agcggggcgc ggcgacaggc tgtccagctc catctgggtc
      541 tcggcgaagg ccgcctggat ggtgcacgtg ttgccgccat ggccgttgac caccagcacg
      601 cggtcgaagc cgtggcggac cagcgatgtc aggcaatcct tcatcaccgc cagcagggtc
      661 gagggcttca gcgtcatcga gccggggaac gccatgtggt gctgcgccat gcccaccggc
      721 agggtcggcg ccaccatcac gcccagcgcc tcgcccaccc gccaggccac cgcctcggcg
      781 cacagcgcgt cggtgccgac caggccggtg gggccgtgct gctcggtcga gccgatgggc
      841 aggatgattg cgcgcgatcg ggtcaggtaa tcctcgacct ggggccaggt ggcaagctgc
      901 aggcgcatcg aaatcctcca atcggtcggt ccgctgtcat cgcacgaaag gacgcggcga
      961 gggaagtgcg cgggcggatg tgccacactt ttgggcagtt cattttcacc ctgatttgcc
     1021 agtgttttag gcggattatg ctgcacttgc tcagttcgtt ggtttggtca tagtatgccg
     1081 atcggatgac agcctccggt gtccgatggg cgccgccggt aggcccttag cccccacgtc
     1141 gcgcccatgc cggggtcaaa caaatgagcg ttgtcttcac tcgtcgccgt gtgctcaccg
     1201 tcctcgccgc cgccgcaggt gtgcccctgc tgatgcgggc gggcagcgcc caggcgcgcc
     1261 tggtgaagtg ggaaggcacc gccatggggg cgccggcctc gctgtcgatc tatcacaccg
     1321 acgaaaagca cgcccgtgcc gccatcgagg cggcggtgac ggagctcaac cgcctggaag
     1381 gcatcttcag cctgtaccgc gccgattcgg cgatgtcgca attgaaccgc gacggcgccc
     1441 tggcgcaggc ccccatcgaa ctggtcgagg ccatggggct ggcgctggag accgccgcga
     1501 tcaccggcgg cgccttcgac cccaccgtcc agccgctgtg gcaggcctat ttcacccact
     1561 tcaccgccgg cagcgccgat tccgccggcc cggcggcgga agacattgcc gccgcccgcg
     1621 ccctggtggg ctggcagagc gtggcggtgg agaacggcac catccgcttc gagcgccccg
     1681 gcatgggcgt caccctcaac ggcatcgccc agggcatcgt caccgaccgc gtcgccgccg
     1741 tgctgcgcgc ccacggcctc gagcgcatgc tggtggacat gggcgagccc aaggcgctgt
     1801 cggccaagcc cgacggctcg gcctgggtca tcgccatcgc cgatccgcgc gacccgtcgc
     1861 gcaccatcac cagcatcgac gcggtggaca aggcggtcgc cacctcgggg ggctacggca
     1921 ccaccttcga cgccgccaag cgcttcaccc acctgatcga ccccgccagc ggcaccaccg
     1981 cgccggccga ccagagcgtc accgtcatcg ccgattcggc ggccaaggcc gacgccctgt
     2041 ccaccgccct ggccgtcgcc ccggtcgagc gccaccgcga catcatcgcc agcgccggcg
     2101 gcgtcaccgc cctgttcgta tccaaggacg gcggcatcct ccgcctgccg gcgtaagcaa
     2161 agggagcgcg gggcatgacc gccatcgaca ccgacgagat cgcggtcgcc tgccgcgacc
     2221 tggcgcccac gcccgaccac ggcgaactgg tgcgcgccgc ccgcgccgcc accggcctcg
     2281 acctcaagct ggcctatgtg gacgacggct ggtttcgcct gggcggcgtg gtcgacggca
     2341 gcggcaagcg cctggccgac gagatcgagg attgggtggt ggccgagacc ggcggcgaca
     2401 tgaccgagct gttcagccgc tattccgacg ccaacctgcg cttcatccgc ttcgccggcc
     2461 gccgcatcta tctgaccgcc gccaccggcc ccgatccgct cgacttcgtc cagatcgaga
     2521 tcgaccgggt g
//
LOCUS       DATIKR010000035         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_73375, whole genome shotgun sequence.
ACCESSION   DATIKR010000035 DATIKR010000000
VERSION     DATIKR010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73375"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="VLL76_00555"
     CDS             complement(<1..618)
                     /locus_tag="VLL76_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014101619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28004.1"
                     /translation="MSVTAVDQGHTFFTSDHWSADISTEPPKDRAEKKGELTMFAEEE
                     PSFWDFLDVINPLQHIPLVNTLYREATGDQIGVGARLAGGALFGGPIGLAASMVNCVI
                     EEETGKDVGGHMLAMFGDDEPAAPGDPAPTQVAMAAPAPTPTAPAAAPEAEADEEPMP
                     DMTGAMAFTIDGPVEPLPAAPAMAAAAPIQARPMPLTGAQPARFMP"
     gene            complement(746..1852)
                     /gene="ribA"
                     /locus_tag="VLL76_00560"
     CDS             complement(746..1852)
                     /gene="ribA"
                     /locus_tag="VLL76_00560"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HSV28005.1"
                     /translation="MTRPLDVSPRPPAPASAPLIAVDRAAAELRRGGVVAVRGADGAV
                     IHALSVEAVTPETLARLGAAAEVAVTGRRAAVLGLAASGDAVQRLSLVGGFDAETIAA
                     LSDPCARDGRPDLAGLTVAAVAAQSGIAGAVALAKLARLLPAVAFAPAAAAAPGMLTV
                     DAADIADYQHGAAHSLTIVSQARVPLQDAENARIVAFRPADGGIEHLAIVIGEPDCDA
                     PVLARLHSECFTGDLLGSLRCDCGDQLRGAIAEISQAGSGVLLYLAQEGRGIGLVNKL
                     RAYQLQDDGFDTLDANLQLGFDDDERLYQPAAQMLRLLGIGRVRLMTNNPFKVDALAR
                     HGIDVAERVPHVFPANDHNEGYLRTKATRGGHLF"
BASE COUNT          290 a          646 c          727 g          274 t
ORIGIN      
        1 cggcatgaag cgggcgggct gggcgccggt aagcggcatc ggccgggcct ggatcggcgc
       61 ggcggcggcc atcgccggcg cggcgggcag gggctcgacc ggaccgtcga tggtgaaggc
      121 catggcgccg gtcatgtcgg gcatcggctc ctcgtcggct tccgcctcgg gcgcggcggc
      181 gggagccgta ggcgtcgggg cgggggccgc catggccacc tgggtcggcg ccggatcgcc
      241 gggtgccgcc ggttcgtcgt cgccgaacat cgccagcatg tggccgccga catccttgcc
      301 ggtctcttcc tcgatcacgc aattgaccat ggaggccgcc aggccgatgg gtccgccgaa
      361 cagggcgccc ccggccaacc gcgcgccgac accgatctgg tcgccggtgg cctcgcggta
      421 gagggtgttg accaacggaa tgtgctgcag cggattgatg acgtcgagga agtcccagaa
      481 gctgggttct tcctcggcga acatggtcag ctcgcccttc ttttcggcac gatccttggg
      541 cggctcggtc gaaatgtcgg ccgaccagtg gtcgctggtg aagaaggtat ggccctggtc
      601 gacggcggtt acgctcatgg agcacctgtg ggtggcggtc gcatcctcag acgcaagcgc
      661 catgccagac ggcaacccct tggttttcct tgatttcgcg agaagggcag tgggcaggaa
      721 acgccggccg ggcaagaact gccggttaga aaaggtgtcc gccgcgcgtc gccttggtgc
      781 gcagatagcc ttcgttgtgg tcgttggcgg ggaacacgtg cggcacccgc tcggccacgt
      841 cgatgccgtg gcgagccagg gcatcgacct tgaacgggtt gttggtcatc agccgcaccc
      901 ggccgatgcc cagcagccgc agcatctggg ccgccggctg gtacaggcgc tcgtcgtcgt
      961 cgaagcccag ctgcaaattg gcgtcgaggg tgtcgaaacc gtcgtcctgc agctggtagg
     1021 cccgcagctt gttgaccagg ccgatgccgc gcccttcctg ggcgagatag agcagcacgc
     1081 cgctgccggc ctgggaaatc tcggcgatgg cgccgcgcaa ctggtcgccg caatcgcagc
     1141 gcaggctgcc cagcaaatcg ccggtgaaac attccgaatg cagccgcgcc agcaccggcg
     1201 catcgcaatc gggctcgccg atgacgatgg ccagatgctc gatgccgccg tcggcggggc
     1261 ggaaggcgac gatgcgggcg ttctcggcgt cctgcaacgg cacccgcgcc tgactgacga
     1321 tggtcaggct gtgggcggcg ccgtgctggt aatcggcgat gtcggcggca tcgaccgtca
     1381 gcatgcccgg cgcggcagcg gcggcgggag cgaacgccac cgccggcaac aggcgggcca
     1441 gcttggccag ggccaccgcg ccggcgatgc ccgattgggc cgcgacggcg gcaaccgtca
     1501 ggccggccag gtccgggcgg ccgtcgcggg cacaggggtc ggacagcgca gcgattgttt
     1561 cggcgtcgaa accgcccacc agggacaggc gctgcaccgc gtcgcccgaa gccgccaggc
     1621 cgagcacggc ggcacggcga ccggtcaccg cgacctcggc ggcggcgccc aggcgggcca
     1681 gggtctctgg ggtcaccgcc tcgaccgaca aggcgtggat gacggcgccg tcggccccac
     1741 gcacggccac cacgccgccc cggcgcagct ccgctgcggc acggtccacg gcgatcagcg
     1801 gcgccgaagc gggcgccggg ggcctgggag agacgtcgag gggcctggtc atatgagcgt
     1861 tatccgaagc aaggccggca ccatagcgtt tttcgcgccg gggcaaaagg gggcgggcgc
     1921 ctttcgcggc ggcacgg
//
LOCUS       DATIKR010000036         2954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_97413, whole genome shotgun sequence.
ACCESSION   DATIKR010000036 DATIKR010000000
VERSION     DATIKR010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97413"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VLL76_00565"
     CDS             complement(<1..338)
                     /locus_tag="VLL76_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HSV28006.1"
                     /translation="MTHTASASLGNLPEWDLTDLYPAPDSAKLSQDLDAADAAAKSFH
                     AKYNGRLADVSGDELGEAIAEYERISEIIYRAMSYAQLHYAGNQTDPERGQFYQGMQE
                     RVTDISTHTL"
     gene            455..2248
                     /locus_tag="VLL76_00570"
     CDS             455..2248
                     /locus_tag="VLL76_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HSV28007.1"
                     /translation="MVDYAEADSLTSVFFAQAERLGDKPFLWAKRAGEWRPLTWTQAA
                     DCVRHLAGGLRALGLATGDRVCLVSENRPEWAVADFAIMAAGGITVPAYTTNTPADHL
                     HILNNSGARFAIVSTRALADKLLAAAWQADRPPTIICMEAPRMAQSTGISVVSWEEAM
                     ALGTGHEPDIATTVTATRRDDTACVIYTSGTGGAPKGVMLSHGALLADCLGAFHLLAD
                     LGLGDDEGFLCFLPLSHSYEHTVGLMFPMTIGAQIHYAESIDHLAANMAEVRPTIMTA
                     VPRLYESMRSRILRAIHREGGLREKLFLRTVALGSKRYEKGRLGPIDALQDAVLDRAV
                     RDKVRARFGGRLKALVSGGAPLAYEVGLFFTALGVRILQGYGQTEAGPAISCSPPSKV
                     KIDTVGPPLKGIDVRIAEDGEILVRGEVVMQGYWRDEESTRRAIQDGRWLHTGDIGEI
                     DGDGYIRITDRKKDIIVNSGGDNVSPQRVESFLTLQPEIAQAMVHGDRRPHLVALIVP
                     AQDWAEGWAKTHGKTAELAALVEDADFRKAVAEAVERVNGCLSTIEKVRRFVLTAESF
                     NTDNGMLTPTLKIRRHVIRERYGAMLERLYG"
     gene            complement(2454..>2954)
                     /locus_tag="VLL76_00575"
     CDS             complement(2454..>2954)
                     /locus_tag="VLL76_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28008.1"
                     /translation="GWTAAATLGQLMALTAMTDEERGANPMAIVYLGLDEDGKAIAGA
                     LGLAYGLTADEAVLRELDERLTSLPLSPYTAAAFRAVAYAWLRASAYAPATRISMKAG
                     AAAKLTFAPSHPELIAVELLDLEIRRSLKLLDIEDDGRRLLGRARRQIGGQHYLTRRI
                     EQVLAQ"
BASE COUNT          483 a          990 c          998 g          483 t
ORIGIN      
        1 aacagggtgt gggtcgagat gtcggtcacc cgttcctgca tgccctgata gaactggccg
       61 cgctcggggt cggtctggtt gccggcgtaa tgcaactggg cataggacat ggcgcgatag
      121 atgatctcgc tgatgcgctc gtactcggcg atggcctcgc ccagttcgtc gcccgaaaca
      181 tccgccagcc ggccgttgta tttcgcatgg aaagacttgg cggcggcatc cgccgcatca
      241 aggtcttggg aaagcttggc cgaatcgggg gctggataaa ggtccgtcag gtcccattcc
      301 ggaagattgc cgaggctggc ggaagcggta tgcgtcatca agtgactcct tgtccgggac
      361 gggatatggg tatctgaacg gggacggcca agaaccccgg catataagag ggcgcccgcg
      421 ccgggttggc aaggggccga gcgggaggaa tcgcatggtg gactacgccg aagccgacag
      481 cctgacgtcg gtcttcttcg cccaggcgga gcggctgggc gacaagccgt tcctgtgggc
      541 caagcgcgcg ggcgagtggc ggccgctgac ctggacccag gccgccgatt gcgtgcgcca
      601 tctggccggc ggcctgcgcg ccctggggct ggcgaccggc gaccgcgtct gcctggtgtc
      661 ggagaaccgg ccggaatggg cggtggccga tttcgccatc atggcggctg gcggcatcac
      721 cgtgccggcc tacaccacca acaccccggc cgaccacctg cacatcctca acaattccgg
      781 cgcccgcttc gccatcgttt cgacccgcgc cctggccgac aagctgctgg ccgccgcctg
      841 gcaggccgac cggccaccga ccatcatctg catggaagcg ccccggatgg cgcaatccac
      901 cggcatcagc gtggtatcgt gggaagaggc catggccctg ggcaccggcc atgaacccga
      961 catcgccacc accgtcaccg ccacccgacg cgacgacacc gcctgcgtca tctacacctc
     1021 gggcaccggc ggcgcgccca agggggtgat gctgtcgcac ggcgcgctgc tggccgattg
     1081 cctgggcgcc ttccacctgc tggccgacct gggcctgggc gacgacgagg gctttttgtg
     1141 cttcctgccg ctgtcgcatt cctatgagca cacggtgggg ctgatgttcc ccatgaccat
     1201 cggcgcccag atccattatg ccgagagcat cgaccatctg gcggccaaca tggccgaggt
     1261 gcggcccacc atcatgaccg ccgtgccgcg cctgtacgag agcatgcgct cgcgcatcct
     1321 gcgcgccatc caccgcgagg gcggcctgcg cgagaaactg ttcctgcgca ccgtcgccct
     1381 gggcagcaag cgctatgaaa agggccggct gggccccatc gacgccctgc aggacgccgt
     1441 gctggaccgc gcggtccgcg acaaggtgcg cgcccgcttc ggcggccggc tcaaggcgct
     1501 ggtgtcgggc ggcgcgccgc tggcctatga ggtcggcctg ttcttcaccg ccctgggggt
     1561 ccgcatcctg cagggctacg gccagaccga ggccggcccc gccatttcgt gcagcccgcc
     1621 cagcaaggtc aagatcgaca ccgtcgggcc gccgctcaag ggcatcgacg tccgcatcgc
     1681 cgaggacggc gagatcctgg tgcgcggcga ggtggtgatg cagggatatt ggcgcgacga
     1741 ggaatccacc cgccgcgcca tccaggacgg gcgttggctg cataccggcg acatcggcga
     1801 gatcgatggc gacggctata tccgcatcac cgaccgcaag aaggacatca tcgtcaactc
     1861 gggcggcgac aacgtctcgc cgcagcgggt ggaaagcttc ctgacgcttc agcccgagat
     1921 cgcccaggcc atggtccacg gcgaccgccg cccccatctg gtggcgctga tcgtgcccgc
     1981 ccaggactgg gccgagggct gggccaagac gcacggcaag accgccgaac tggccgccct
     2041 ggtcgaggat gccgatttcc gcaaggccgt ggccgaggcg gtggagcgcg tcaatggctg
     2101 cctgtccacc atcgagaagg tccgccgctt cgtgctgacg gcggagagct tcaacaccga
     2161 caacggcatg ctgaccccca ccctgaaaat ccgccgccac gtcatccgcg aacgctatgg
     2221 cgcgatgctg gagcggttgt acgggtaggt gtacttttcc gcgaggtctt ttcgcggaat
     2281 tccggggaag gcgcctgtct tattccgtca tgcccgtgct tgacacgggc atccacgcgg
     2341 ctccgcttcg ccaggcattt cccccgctga gctttgcggt gccacgtgga tacgcgggtc
     2401 aagcccgcgc atgacgagcg ataggctccc cgctaatgcg cgatgaacca tttttattgc
     2461 gccagcacct gctcgatgcg acgggtgagg tagtgctggc caccgatctg gcggcgggcg
     2521 cggcccagca gccggcggcc atcgtcctcg atatcgagca gcttgaggct gcgacggatc
     2581 tctaggtcaa gcaattccac ggcgatgagt tcgggatggc tgggggcgaa cgtcagcttt
     2641 gccgccgcgc cggccttcat gcttattcgg gtggctgggg cgtaggcgct ggcacgcagc
     2701 caggcatagg cgacggcgcg gaaagccgcg gcggtgtagg gggagagcgg gagcgaggtg
     2761 agccgttcgt ccagctccct taaaacagcc tcatcggcgg tcaagccgta tgccagtccc
     2821 agtgccccag cgatcgcttt gccgtcttcg tccagcccca gatagacgat ggccatggga
     2881 ttagccccgc gttcctcgtc ggtcatggcg gtcagcgcca tgagctggcc cagcgtcgcg
     2941 gcggcggtcc agcc
//
LOCUS       DATIKR010000037         4001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_133803, whole genome shotgun sequence.
ACCESSION   DATIKR010000037 DATIKR010000000
VERSION     DATIKR010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133803"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..1939)
                     /locus_tag="VLL76_00580"
     CDS             complement(83..1939)
                     /locus_tag="VLL76_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HSV28009.1"
                     /translation="MRRRDPSNYHRTPQIGPRSDWKTIRTLLPYLWPEGQPGLRLRVV
                     LALVCLAAAKGVNVTVPLFYKQAVDALTAKPGLAVAAVPVMMLLAYGVARVLNSTFSE
                     LRDVFFARVGQRAIRSVGLKVFRHLHGLALRFHLDRQTGGVSRAIERGTKGIEFLLNF
                     MLFNILPTFLEIGLVTIVLWSLYDWTYAAVTFATIALYIAYTLVVTEWRTKFRRAMNE
                     QDSQASTKAIDSLLNFETVKYFGNEEHEASRYDRSLERYEEAAVKSKVTLSMLNTGQG
                     AIIAVGLTAIMLMAAQGVVAGTMTIGDFVLVNSYLVQLYLPLNFLGFVYREIKQSLTD
                     MEAMFRLLGENAEVTDSPGAPPLAVAGGAIRFEDVCFGYNANRDILKSVSFTVPAGRT
                     VAIVGPSGAGKSTLSRLLFRFYDVTSGRITIDGQDIREVQQASLRAAIGIVPQDTVLF
                     NDTIRYNIAYGRPGASQAEIEQAARLAAIHDFVASLPDGYDTRVGERGLKLSGGEKQR
                     VAIARTILKGPAILIFDEATSALDTHTEKEIQASLREVSKDRTTLMVAHRLSTVVDAD
                     EIIVLEAGAIAERGRHAELLAQGGRYAEMWAKQQEAARLHEKLEEAENEAAE"
     gene            complement(1989..2843)
                     /locus_tag="VLL76_00585"
     CDS             complement(1989..2843)
                     /locus_tag="VLL76_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4743 domain-containing protein"
                     /protein_id="HSV28010.1"
                     /translation="MGYLDHIRRCNAHDIGKFRPFLVERRHVGWVRHDVAARLEWFPA
                     TFRITADAVTLHPRLEESEQRSEAIDAVCEELAAEHGFPKLRGERYGVAPSWGETPLL
                     TIDRAVVSVFGVRAYGVHVNGYVDTPDGIKLWIGHRATDKAVAPGKLDNLVAGSQPFG
                     LSLFENLIKEAAEEADIPRAIAATAHPVGAVCYCLEDEWGLKPDAMFCYDLEVPDYFT
                     PRNTDGEVTHFALMDVVDVAKRVRDSDDFKYNVNLVILDFLVRRGILSPEDDPEYLEI
                     VRGLRQGW"
     gene            2995..>4001
                     /locus_tag="VLL76_00590"
     CDS             2995..>4001
                     /locus_tag="VLL76_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSV28011.1"
                     /translation="MTEFAKKTLADWEALASKDLKGASPDTLNWETPEGITVKPLYTA
                     ADLEGLETLDTLPGFPPFLRGPRATMYAAKPWTVRQYAGFSTAEESNAFYRRNLAAGQ
                     QGISVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVEDMKILFDGIPLDKMSVSMTMN
                     GAVLPVLAGYIVAAEEQGVSQELLSGTIQNDILKEFMVRNTYIYPPAPSMRIIADIIE
                     YTSKNMPKFNSISISGYHMQEAGATAVQELAFTLADGLEYVRAALGRGLKIDDFAGRL
                     SFFWAIGMNFFMEIAKMRAGRMLWARIIKQFDPQKPSSMALRTHCQTSGVSLTEKDAY
                     N"
BASE COUNT          676 a         1316 c         1337 g          672 t
ORIGIN      
        1 gaggtcaagg tcttcgtccg ctaatccgga ccgaatccca acgaaaaccc cggagggcga
       61 cctccggggt tttttgttgc ggctactccg ccgcttcgtt ctccgcctct tccagctttt
      121 cgtgcaggcg tgccgcttcc tgctgcttgg cccacatctc ggcgtaacgg ccgccttggg
      181 ccagcagttc ggcgtgacgt ccgcgttcgg cgatggcgcc ggcctccagc acgatgatct
      241 cgtcggcatc gaccacggtg gacagccgat gggccaccat cagggtggtg cggtccttcg
      301 acacctcgcg caagctggcc tggatctcct tctcggtgtg ggtgtcgagc gcgctggtcg
      361 cctcgtcgaa gatcaggatg gcgggtccct tcaggatggt gcgggcgatg gcgacgcgct
      421 gtttctcgcc gcccgacaac ttgagcccgc gctcgccgac gcgggtgtcg tagccgtccg
      481 gcagcgaggc gacgaaatcg tggatggcgg ccagccgcgc cgcctgctcg atctcggcct
      541 gcgacgcgcc gggccggcca taggcgatgt tgtagcggat ggtgtcgttg aacagcacgg
      601 tgtcctgcgg gacgatgccg atggcggcgc gcaacgacgc ctgctgaacc tcgcggatgt
      661 cctggccgtc gatggtgatg cggccgctgg tgacgtcgta gaagcggaac agcaggcgcg
      721 acagggtgct cttgcccgcc cccgacggcc cgacgatggc gacggtgcgg ccggccggca
      781 cggtgaagct gaccgacttc aggatgtcgc ggttggcatt gtagccgaag cacacgtcct
      841 cgaagcggat ggcgccgccg gccaccgcca gcggcggggc gcccgggctg tcggtgacct
      901 cggcgttttc gccgagcagc cggaacatgg cctccatgtc ggtcagcgac tgcttgatct
      961 cgcgatagac gaagcccagg aagttcagcg gcaggtaaag ctgcaccaga tacgagttca
     1021 ccagcacgaa atcgccgatg gtcatggtgc cggcgacgac gccttgggcc gccatcagca
     1081 tgatcgcggt caggcccacg gcgatgatgg cgccctggcc ggtgttgagc atggacaggg
     1141 tgaccttgct cttgaccgct gcctcctcat agcgctccag cgagcggtcg tagcgcgacg
     1201 cctcgtgctc ctcgttgccg aaatacttga ccgtctcgaa gttcagcagc gaatcgatgg
     1261 ccttggtgct ggcctgggaa tcctgctcgt tcatggcgcg gcggaacttg gtgcgccatt
     1321 ccgtcaccac cagggtgtac gcgatataaa gcgcgatggt ggcgaaggtg acggcggcat
     1381 aggtccagtc gtacaggctc cacagcacga tcgtgaccag gccgatttcc aggaaggtgg
     1441 gcaggatgtt gaacagcatg aagttcaaca ggaactcgat gcccttggtg ccgcgctcga
     1501 tggcgcgcga cacgcccccc gtctggcggt cgaggtggaa gcgcagcgcc aggccgtgca
     1561 ggtggcggaa caccttcaac cccaccgacc ggatggcgcg ctggccgacg cgggcgaaga
     1621 acacgtcgcg cagttccgag aacgtggagt tcagcacccg cgccacgcca taggccagca
     1681 gcatcatcac cggcaccgcc gccaccgcca gcccgggctt ggcggtcagc gcgtccaccg
     1741 cctgcttgta gaacagcggc acggtgacgt tgacgccctt ggcggcggcc aggcaaacca
     1801 gcgccagcac cacccgcagc cgcaaaccgg gttggccctc gggccacagg tagggcagca
     1861 gggtgcggat ggtcttccag tccgagcgtg gcccgatctg gggcgtgcgg tggtagttcg
     1921 aggggtcgcg gcgtcgcatg gcgactaatg tgagggcgcg cgggcgcgct gacaacggac
     1981 gagccggact accagccctg ccttagccct ctgacgatct ccaggtattc cgggtcgtcc
     2041 tcggggctga ggatgccgcg gcggaccagg aagtccagga tcaccaggtt gacgttgtat
     2101 ttgaagtcgt cgctgtcgcg cacccgcttg gccacgtcga ccacgtccat cagcgcgaaa
     2161 tgggtgacct cgccgtcggt gttgcgcggc gtgaaatagt cggggacttc caggtcgtag
     2221 cagaacatgg cgtcgggctt caggccccat tcgtcttcca ggcagtagca gacggcaccg
     2281 accgggtggg cggtggcggc gatggcgcgg gggatgtcgg cctcctcggc cgcttccttg
     2341 atcaggttct cgaacagcga caggccgaag ggctggctgc ccgccaccag attgtccagc
     2401 ttgcccggcg ccaccgcctt gtcggtggcg cggtggccga tccacagctt gatgccgtcc
     2461 ggcgtgtcca catagccgtt gacgtgcacg ccataggcgc gcaccccgaa cacgctgacg
     2521 acggcgcggt cgatggtcag aagcggcgtc tcgccccagg acggcgccac gccgtaacgc
     2581 tcgccgcgca gtttggggaa gccgtgctcg gccgccagtt cctcgcacac cgcgtcgatg
     2641 gcttcggatc gctgctcgga ctcctccagg cggggatgca gcgtcaccgc gtcggcggtg
     2701 atgcggaagg tggcgggaaa ccattccagc cgcgccgcca cgtcgtgccg cacccacccc
     2761 acatgccgtc gctcgaccag gaacggtcgg aacttgccga tgtcgtgggc gttgcagcgc
     2821 cggatgtggt cgagataacc catgcggaaa aggtgcgcgc gggggcggcg ggcgtcaagg
     2881 gcgggcgcat gccgccatgc gcaagtatct ttcgcgcaca cgtggacgcg cgggcggcgg
     2941 atcgctatac tcccgccctc ccgggtagca agacgggtag ctggaggaaa gaaaatgacc
     3001 gagtttgcca agaagaccct tgccgattgg gaagctttgg cttccaagga cctcaagggt
     3061 gcgtcccccg acacgctgaa ttgggagacg ccggaaggca tcacggtcaa gccgctctac
     3121 accgccgccg acttggaagg cctcgagacg ctcgacaccc tgccgggctt cccgccgttc
     3181 ctgcgcggcc cgcgcgccac catgtacgcg gccaagccgt ggaccgtgcg ccagtatgcc
     3241 ggcttctcca ccgccgagga atccaacgcc ttctaccgcc gcaacctcgc cgccggccag
     3301 cagggcatct cggtggcgtt cgacctggcc acccatcgcg gctatgattc cgatcacccc
     3361 cgcgtggtcg gcgacgtcgg caaggctggt gtggccatcg attccgtcga ggacatgaag
     3421 atcctgttcg acggcatccc gctggacaag atgtcggtgt cgatgaccat gaacggcgcc
     3481 gtgctgccgg tgctggcagg ctacatcgtc gccgccgagg aacagggggt gtcgcaggag
     3541 ctgctgtcgg gcaccatcca gaacgacatc ctcaaggagt tcatggtccg caacacctac
     3601 atctatccgc cggcgcccag catgcggatc atcgcggaca tcatcgagta cacctcgaag
     3661 aacatgccca agttcaactc gatctcgatc tccggctacc acatgcagga agctggcgcg
     3721 acggcggtgc aggagctggc cttcaccctg gccgacggcc tggaatacgt ccgcgccgcc
     3781 ctgggccgcg gcctcaagat cgacgatttc gccggccgcc tgtcgttctt ctgggcgatc
     3841 ggcatgaact tcttcatgga aatcgccaag atgcgcgccg gccgcatgct gtgggcccgc
     3901 atcatcaagc agttcgaccc gcagaagccg tcgtccatgg cgctgcgcac ccactgccag
     3961 acctcgggcg tgtcgctgac ggaaaaggac gcctacaaca a
//
LOCUS       DATIKR010000038         2218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_85419, whole genome shotgun sequence.
ACCESSION   DATIKR010000038 DATIKR010000000
VERSION     DATIKR010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85419"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..859
                     /locus_tag="VLL76_00595"
     CDS             293..859
                     /locus_tag="VLL76_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HSV28012.1"
                     /translation="MQTTQGYLAGQLLIAMPQMRDPRFARAVVFLCAHSADGAMGLVI
                     NREFEGLSFPELLSQLEIDAPSGSEKVQVHFGGPVEGGRGFVLHSADYLHETSMKVAD
                     NVALTATVDVLRAIADGMGPARSLLALGYAGWTAGQLDAEIRENAWLNVPADEDLLFG
                     TDLEHKWEAAIHKLGIDFAALSGDAGHA"
     gene            complement(1088..1480)
                     /gene="crcB"
                     /locus_tag="VLL76_00600"
     CDS             complement(1088..1480)
                     /gene="crcB"
                     /locus_tag="VLL76_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HSV28013.1"
                     /translation="MTISPTALLWVAAGGALGSVARYLSMVALGAWAGTGFPWGTLFV
                     NIVGSAVMGVLAELGALAWQPSPDLKVFLTVGILGGFTTFSTFSLDVALLVERHDWAV
                     AALYMGLSVALSVGALFAAMAAVRACMV"
     gene            complement(1525..>2218)
                     /locus_tag="VLL76_00605"
     CDS             complement(1525..>2218)
                     /locus_tag="VLL76_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28014.1"
                     /translation="SGPVTAPLYAYDNTLGEAAVVGGTVYRGPAEAMQGQYVFADFVS
                     GRVWTLAGGEATERSIETDFGTLDRPTSFGEDARYRLYLTDYDGDLYRLVPQGSGPAT
                     ADTIDGLGGGDVLFGGGGADVLTGGDGIDRLVGQGGDDRLVGGAGNDILDGGPGADEF
                     VIAPGTGTDTIADFEDGDVIVIDGPGTADQLLADAEARGSGSFIALGQTDGIVIAGID
                     PSQLLASDFAFV"
BASE COUNT          377 a          769 c          750 g          322 t
ORIGIN      
        1 aaatgcaggc ccaggcgcag ggattgcgct tcgccgacgg cggtggtggc cgagatcagg
       61 cgcacgcggc cggcctcgtt gtcggcccag gcggaagcgc ccggatcggc cgaagcggga
      121 gcggcgaaaa gggccgtcag ggcggccagc agcaagcaaa gcgatcgcat gacggcaaca
      181 acaccagagc gtcgggcgcg ctgtcaactg aacacccggt catgatcgcc gccgccgggg
      241 cgaagggccg gggttgcttt cacctccaga ccgtcatatg tgtggtggca ccatgcagac
      301 gacccaaggc tacctcgccg gccaactcct gatcgccatg ccccagatgc gggatccccg
      361 cttcgcgcgt gccgtcgtct tcctgtgcgc ccacagcgcc gacggcgcca tgggcctggt
      421 gatcaaccga gagttcgaag gcctcagctt ccccgaattg ctgtcgcagc ttgagatcga
      481 cgcccccagc ggcagcgaga aggttcaggt gcatttcggc ggtccggtcg aaggcggccg
      541 cggcttcgtg ctgcattccg ccgactacct gcacgagacc tcgatgaagg tggccgacaa
      601 cgtggcgctg accgccaccg tcgacgtgct gcgcgccatc gccgacggca tggggccggc
      661 ccgctcgctg ctggccctgg gctacgccgg ctggacggcc ggtcagctcg acgccgagat
      721 ccgcgagaac gcctggctca acgttcccgc cgacgaggac ctgttgttcg gcaccgacct
      781 ggaacacaag tgggaagcgg ccatccacaa gctgggcatc gacttcgccg ccctgtccgg
      841 cgacgccggc cacgcctaat cgtttattat tgggagctta tcgcccgtca tgcgcgggct
      901 tgacccgcgg ctgtccggtt tagatttttc atgaaatgcc gcttcgctgt gcccccttcc
      961 cgtcatcgcc gggcttgacc cggcgatcca cgcggcagcc gcgatctccg ctttaatatc
     1021 agtaccttag gcggatccgc gtggatggcc gggtcaagcc cggccatgac ggaagggtgt
     1081 agcgaagcta aaccatgcat gcgcgcacgg ccgccatcgc cgcgaacagc gcccccaccg
     1141 acagcgccac cgatagcccc atgtagagcg cggcgacggc ccagtcgtgg cgttcgacca
     1201 acagggcgac gtccagcgag aaggtggaga aggtggtgaa gccgcccagg atgccgacgg
     1261 tcaggaagac cttgaggtcg ggactgggct gccacgccag cgcccccaat tcggccagca
     1321 cccccatcac cgccgagccg acgatgttga cgaacagggt gccccaggga aagccggtgc
     1381 cggcccaggc gcccagcgcc accatggaca ggtagcgggc gaccgagcca agcgcgccgc
     1441 cagcggcgac ccaaagcagg gcggtgggag agatggtcat ccgccgaaca tccctcgcgc
     1501 cgcccgcctt ggcaagaggc tgcatcagac gaaggcgaaa tccgacgcca acagttgcga
     1561 tggatcgatg ccggcgatga cgatgccgtc ggtctgtccc agcgcgatga agctgccgct
     1621 gccgcgtgcc tcggcatcgg cgagcaactg gtcggcggtg ccgggaccgt cgatcacgat
     1681 gacgtcgcca tcctcgaaat cggcgatggt gtcggtgccg gtgccgggcg cgatgacgaa
     1741 ttcgtcggcg ccggggccgc cgtcaaggat gtcgttgccg gcaccgccga ccagccggtc
     1801 gtcgccgccc tgcccgacca gccggtcgat gccgtcgccg ccggtcagca cgtcggcacc
     1861 gccgccgccg aacaacacgt cgccgccgcc caggccgtcg atggtgtcgg cggtcgcggg
     1921 gccgctgccc tgcggcacca gccggtaaag gtcgccgtcg taatcggtca ggtacaagcg
     1981 gtagcgcgca tcctcgccga agctggtggg gcggtcgagc gtgccgaaat cggtttcgat
     2041 gctgcgttcg gtcgcctcgc cgccggccag cgtccaaacg cgccctgaaa cgaagtcggc
     2101 gaacacgtac tggccttgca tggcctcggc cgggccgcga tagacggtgc cgccaaccac
     2161 cgccgcctcg cccagggtgt tgtcgtaggc gtagagcggc gccgtcaccg ggccgctg
//
LOCUS       DATIKR010000039         3462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_230629, whole genome shotgun sequence.
ACCESSION   DATIKR010000039 DATIKR010000000
VERSION     DATIKR010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3462
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230629"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..311)
                     /locus_tag="VLL76_00610"
     CDS             complement(96..311)
                     /locus_tag="VLL76_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28015.1"
                     /translation="MGRLYSLDEQAATFAESFPDADRDGVREWYLEQLKRDRERGFWK
                     RLEAGATVFVLVGVLPSLALWAYFTLS"
     gene            complement(445..1275)
                     /locus_tag="VLL76_00615"
     CDS             complement(445..1275)
                     /locus_tag="VLL76_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSV28016.1"
                     /translation="MSFKDILVHVDNSPHARQRIELAGRLAKGQDAHLIALNVRTRPA
                     LPQFIRSQYGAQIDKVRESFNAEAAREARAAFDAVHPEHGITTEWRDVEADRLADTVA
                     LHARYCDITVIGQNEIGEDGERPLADALVLDVGRPVLVVPSAGTFPTIGERVLVAWNG
                     SREATRAVHDALPLLKSAKLAHVIAVNPSGGMAGHGDVPGADICLHLTRHGVNAVCEH
                     VRSEDLNVGQMLLSRAADEDADLIVMGAYGRSRLRELVLGGATRHLLRHMTVPVLMSH
                     "
     gene            1408..2862
                     /locus_tag="VLL76_00620"
     CDS             1408..2862
                     /locus_tag="VLL76_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-like domain-containing protein"
                     /protein_id="HSV28017.1"
                     /translation="MFGISRAPEIKRAGQHWFNVEAPLSLADLKGRLVILDFWTFCCI
                     NCVHVLPTLARIEAAYPDEVAVIGIHSPKFSHERDPETVRQAIARYDVRHPVVHDPDM
                     VLWREYCVRAWPTLVLISPDGFIIGQLSGEPHPDLLVQGIGDMLREFWARGEMKPRKF
                     AVEPLNEDGGALRFPGKIKPCPATDGGKMWALADTGHHQIVLLDDDGCELVRYGDGTA
                     GWRDGGVEASFNAPEGLACDLDHIYVADTRNHVIRRIDRATGITDTIAGIGCRGAILR
                     HPEPADGCALASPWDLELQDHQLYFANAGSHQIGILDLDERMVRPVAGNGGENIVDGM
                     ADDALLAQPSGLALADGSLYFADSETSALRRVALDRQRVETLVGAGLFEFGHANGPLD
                     QARLQHPLGVAAVDGRVYVADSYNSAIRVVDLAAGTVADLPPLRCADLVCRPHAEPAG
                     IAADGPDRLLVSDTNNHRIVEILLDQGLTRTWLE"
     gene            2915..3220
                     /locus_tag="VLL76_00625"
     CDS             2915..3220
                     /locus_tag="VLL76_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28018.1"
                     /translation="MAGKSRSEIIGDIESYVGRNGGVWGEWFVGVTGAPKQKLFAQHK
                     VRQTGDAWISRLAKDEHEAHEVAEYLVTIRKAKGKFGAPRDTDLYIYCFKIKSHTRV"
     gene            3274..>3462
                     /locus_tag="VLL76_00630"
     CDS             3274..>3462
                     /locus_tag="VLL76_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV28019.1"
                     /translation="MSTVQQSDVAHLFHPYTNLARHPETGPLVIVRGKGVRVFDDAGK
                     DYIEGLAGLWCTTLGWGEQ"
BASE COUNT          579 a         1180 c         1150 g          553 t
ORIGIN      
        1 gcacctgctt cgtcaacggc gaacgcatga gcccgtgccc ggtggcgctg aaggtcgatt
       61 tcaaccttcc agagctggcc caggagtgag gggcctcacg acagcgtgaa ataggcccac
      121 agcgccagcg acggcagaac ccccaccagc acgaacacgg tggcgccggc ttccaggcgt
      181 ttccagaagc cgcgctcgcg gtcgcgcttc aactgctcga gataccactc gcgcacgccg
      241 tcgcggtccg cgtcggggaa ggattcggcg aaggtcgccg cctgctcatc caatgaataa
      301 agcctgccca tggcaaactc acccacaata acgcccatga gcgattcata gggtaagcgc
      361 cccatgccgg tcaagcggat tacaaatgca ggttgcgtca atttttagac aacttcgccg
      421 ctgcttgtca ttactttgac acagtcagtg actcatcagc accggcaccg tcatgtggcg
      481 cagcaggtgg cgggtggcgc cgcccaggac cagttcgcgc agccgcgagc ggccataggc
      541 gcccatcacg atcaggtcgg catcctcgtc ggcggcgcgc gacagcagca tctgcccgac
      601 attgaggtct tccgagcgga cgtgctcgca caccgcgttg acgccatggc gggtcagatg
      661 caggcagatg tcggcgccgg gcacgtcgcc atggccggcc atgccgcccg acgggttgac
      721 ggcgatcaca tgggccagct tggcggattt cagcagcggc agggcgtcgt ggacggcgcg
      781 ggtggcctcg cgactgccgt tccatgccac cagcacgcgc tcgccgatgg tcggaaaggt
      841 gccggccgac ggcaccacca gcaccgggcg gccgacatcg agcaccagcg cgtcggccag
      901 cggccgctcg ccgtcctcgc cgatctcgtt ctggccgatc accgtgatgt cgcaatagcg
      961 ggcatgcagc gccaccgtgt cggccagccg gtcggcctcg acgtcgcgcc attcggtggt
     1021 gatgccgtgt tcgggatgga cggcgtcgaa ggcggcgcgg gcctcgcgcg cggcctcggc
     1081 gttgaagctc tcgcgcacct tgtcgatctg ggcgccgtat tgcgagcgga tgaattgcgg
     1141 cagggccggc cgggtgcgta cgttcagcgc gatcaggtgg gcgtcctggc ccttggcaag
     1201 gcggccggcc aattcgatgc gctggcgggc atgcgggctg ttgtccacgt ggacgaggat
     1261 atccttgaaa gacatcgtct cacctctcgc ctggggaatg tccatcatat cgccgccgcg
     1321 ggcggcctga ccagccggac ccttgcaacg ggtccctgcc gctgccttat gtacagataa
     1381 tcccttcggc tgggtttcga ggcttggatg ttcggaattt ctcgcgcgcc cgaaatcaag
     1441 cgggccgggc agcattggtt caacgtcgaa gccccgctgt ccctggccga cctgaaaggc
     1501 cggctggtca tcctggattt ctggacgttc tgctgcatca actgcgtcca cgtcctgccc
     1561 accctggccc gcatcgaagc cgcgtacccc gacgaggtgg cggtaatcgg gatccattcc
     1621 cccaaattca gccacgaacg cgaccccgaa accgtccgcc aggccatcgc ccgctacgac
     1681 gtgcgccatc cggtggtgca cgatcccgac atggtgctgt ggcgggaata ttgcgtgcgg
     1741 gcgtggccga ccctggtgct gatctcgccg gacggcttca tcatcggcca attgtcggga
     1801 gagccccatc ccgacctgct ggtccagggg atcggcgaca tgctgcgcga gttctgggcg
     1861 cgcggcgaga tgaagccgcg caagttcgcg gtcgagccgc tgaacgagga cggcggcgcc
     1921 ctgcgctttc ccggcaagat caagccctgt cccgcgaccg acggcggcaa gatgtgggcg
     1981 ctggccgaca ccggccatca tcagatcgtg ctgctggacg acgacggctg cgagctggtg
     2041 cgttacggcg acggcaccgc cggttggcgc gacggcgggg tcgaggcatc cttcaacgcc
     2101 cccgagggcc tggcctgcga cctcgaccac atctatgtgg ccgacacccg caaccacgtc
     2161 atccgccgca tcgaccgcgc caccggcatc accgacacca tcgccggcat cggctgccgc
     2221 ggcgccatcc tgcgccatcc cgagccggcc gacggctgcg ccctggccag cccgtgggat
     2281 ctggaactgc aggaccacca gctctatttc gccaatgccg gcagccacca gatcggaatc
     2341 ctcgacctgg atgaacgcat ggtgcggccg gtggcgggaa acggtggtga gaacatcgtc
     2401 gatggcatgg ccgacgacgc cctgctggcc cagcccagcg gcctcgcctt ggcggacggt
     2461 tcgctctatt tcgccgacag cgagacctcg gcgctgcggc gggtggcgct ggaccgccag
     2521 cgggtcgaga ccctggtggg cgccggcctg ttcgagttcg gccatgccaa tggcccgctc
     2581 gaccaggcgc ggctgcagca tccgctgggg gtggcggcgg tcgatggccg ggtgtacgtg
     2641 gccgacagct acaattccgc catccgggtg gtggatttgg ccgccggcac cgtcgccgac
     2701 ctgccgccgc tccgctgcgc cgacctggtc tgccgccccc atgccgagcc ggccggcatc
     2761 gccgccgacg gccccgaccg cctgctggtc agcgacacca acaaccaccg catcgtcgaa
     2821 atcctgttgg accaggggct gacgcggact tggctggaat aaaaccggcc ggtgtggtta
     2881 tctcgcggtg gggacggcgc ttcgggggac gcacatggcc ggcaagtcac ggtccgagat
     2941 catcggggac atcgagagtt acgtcggtcg caacggcggc gtctgggggg aatggttcgt
     3001 cggcgtgacc ggcgcgccca agcagaagct gttcgcccag cacaaggtgc gccagaccgg
     3061 cgacgcctgg atctcgcggc tggccaagga cgagcacgag gcccacgagg tggcggaata
     3121 cctggtcacc atccgcaagg ccaagggcaa gttcggcgcc ccgcgcgaca ccgacctcta
     3181 catctattgc ttcaagatca aaagccacac ccgcgtgtga tgacagggcg ggcgatgctg
     3241 ctctaaactc gcgcctccca tcccggagga ccaatgagca ccgtccagca atccgacgtc
     3301 gcccacctgt tccatcccta caccaacctg gcgcgccacc ccgagacggg gccgctggtg
     3361 atcgtgcgcg gcaaaggcgt gcgggtgttc gacgatgccg gcaaggatta catcgagggc
     3421 ctggccgggc tgtggtgcac caccctgggc tggggcgagc ag
//
LOCUS       DATIKR010000040         1927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_24918, whole genome shotgun sequence.
ACCESSION   DATIKR010000040 DATIKR010000000
VERSION     DATIKR010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24918"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1104)
                     /locus_tag="VLL76_00635"
     CDS             complement(<1..1104)
                     /locus_tag="VLL76_00635"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562195.1"
                     /note="reduces nitrous oxide to nitrogen; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-dependent nitrous-oxide reductase"
                     /protein_id="HSV28020.1"
                     /translation="MPDREDNGVSRRGLFRLAAAGGVGAALATGAGRLLPGEANAQQQ
                     AKPGAQNYEVKPGQLDEYYVFSSSGQSGEVRILGLPSMRELMRIPVFNRDSATGWGQT
                     NESLKVLTSGLTPETRKRLEKRGVGWQCGDLHHPHPTFTDGTYDGRYLIANDKANTRI
                     CRIRLDTMKCDSIVEIPNAHDIHGLRLQKFPKTGYIFANGEHEAPLPNDGKVLDDPKA
                     YRAIFNAVDVDTMKVSWQVIVDGNLDNVDADYQGKYCFSTCYNSEMGMNTAEMTAKEQ
                     DWVVVFNIKRIEEAVKAGKATMMNGVPVLDGRHGSPFTLYIPISNSPHGINTAPDGIH
                     VTINGKLAPTVSVMDVRKLDDAFAGKIKPRDVIV"
     gene            complement(1104..>1927)
                     /locus_tag="VLL76_00640"
     CDS             complement(1104..>1927)
                     /locus_tag="VLL76_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSV28021.1"
                     /translation="PRLLKGFRWSFLAFTLVLLGWVWNAQLSVVNTLALFNALVTDFR
                     WDYFLMDPLIFILWSATAIAMVFWARGAFCGWLCPFGALQEFVNTGAKRLKIRQVHVP
                     WGLHERMWPVKYVIFLGLFGASLYSLAFAEHLAEIEPFKTAIILKFIRDWPFVLYAVA
                     LLVGSLFIERFFCRYLCPLGAGLAIPARMRTFDWLKRHRECGNPCQRCANECPVAAIH
                     PDGRINPNECIYCMHCQELYWDEHRCPHMIQVRLKRERREAMSAPPPPPKPSGGT"
BASE COUNT          327 a          582 c          664 g          354 t
ORIGIN      
        1 cacgatgacg tcgcgcggct tgatcttgcc cgcgaaggcg tcgtccagct tgcgcacgtc
       61 catcaccgat accgtggggg ccagcttgcc gttgatggtg acgtggatgc cgtcgggcgc
      121 ggtgttgatg ccgtgcgggc tgttcgagat ggggatgtag agggtgaagg gcgagccatg
      181 gcggccgtcc aacaccggca ccccgttcat catggtggcc ttgccggcct tcaccgcctc
      241 ttcgatgcgc ttgatgttga acaccaccac ccagtcctgc tccttggcgg tcatctcggc
      301 ggtgttcatg cccatttccg agttgtagca ggtcgagaag cagtacttgc cctggtagtc
      361 ggcatcgacg ttgtccaggt tgccatcgac gatgacctgc cacgacacct tcatggtgtc
      421 cacgtccacc gcgttgaaga tggcgcgata ggccttggga tcgtccagca ccttgccgtc
      481 attgggcagc ggcgcctcgt gctcgccatt ggcgaagatg tagccggtct tggggaattt
      541 ctgcaggcgc aggccatgga tgtcgtgggc gttgggaatc tcgacgatgc tgtcgcactt
      601 catggtgtcg aggcggatgc ggcagatgcg cgtgttcgcc ttgtcgttgg cgatgaggta
      661 gcggccgtca taggtgccgt cggtaaaggt cgggtgcgga tgatgcaggt cgccgcattg
      721 ccagccgacc ccacgctttt ccaaccgttt gcgggtctcc ggtgtcagcc cgctggtcag
      781 caccttcagc gattcgttgg tctggcccca gccggtggcg ctgtcgcgat tgaacaccgg
      841 gatgcgcatc aactcgcgca tggacggcag gccgaggatg cggacctcgc cggactggcc
      901 gctggaggag aagacgtagt attcgtcgag ctggccgggc ttgacctcgt aattctgcgc
      961 gccgggcttg gcctgctgtt gcgcgttggc ctcgccgggc agcaggcggc cggctcctgt
     1021 ggccagggcg gcgccaacgc cgccggcggc ggcaagccgg aacaatccgc ggcgggaaac
     1081 gccgttgtct tcgcgatcgg gcatcacgtg cctccggatg gcttgggtgg agggggtggg
     1141 gccgacatcg cttcgcggcg ctcgcgcttg agcctcacct ggatcatgtg gggacaacga
     1201 tgttcgtccc agtacagttc ctggcagtgc atgcagtaaa tgcattcgtt gggattgatc
     1261 cgcccatcgg ggtggatcgc cgccaccggg cattcgttgg cgcagcgctg gcacggattg
     1321 ccgcattcgc ggtgccgctt cagccagtcg aaggtgcgca tgcgggcggg gatggcgagg
     1381 ccggcgccca gcgggcagag gtagcggcag aagaagcgct cgatgaacag cgagccgacc
     1441 agcagggcga cggcgtacag cacgaacggc cagtcgcgga tgaatttcag gatgatggcg
     1501 gtcttgaagg gttcgatttc ggccagatgc tcggcgaagg ccagcgagta aaggctggcg
     1561 ccgaacaggc ccaggaagat cacgtatttc accggccaca tccgctcgtg caggccccac
     1621 ggcacgtgga cctgccggat cttcaggcgc ttggcgcccg tattgacgaa ttcctgcagc
     1681 gccccgaacg ggcacagcca gccgcagaag gcgccgcgcg cccagaacac catggcgatg
     1741 gcggtggccg accacaggat gaatatcagc gggtccatca ggaagtaatc ccagcggaag
     1801 tcggtcacca gcgcgttgaa cagcgccagc gtgttgacca ccgacaactg ggcgttccac
     1861 acccagccca gcagcaccag cgtgaaggcc aggaacgacc agcggaaccc tttcagcagg
     1921 cgcggcc
//
LOCUS       DATIKR010000041         3435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_49012, whole genome shotgun sequence.
ACCESSION   DATIKR010000041 DATIKR010000000
VERSION     DATIKR010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3435
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49012"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VLL76_00645"
     CDS             <1..567
                     /locus_tag="VLL76_00645"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HSV28022.1"
                     /translation="NNAQLMELRPGSPGRVAPGITVEAVDENGRLMRAGERGMLAVSP
                     GTPGAFLGYLGEDLPGRLRLPTGWLMTGRLGSRDLDGYLWPGELAVGDGCAVVDGTRV
                     AMDEVAAALRFHPRVADARVVARGSSLRAFVVAEGDAAFARELQDWIATRRGLGEVPR
                     IEFVATLPDDDAGDDIPTLRIPSPDERW"
     gene            complement(570..2744)
                     /locus_tag="VLL76_00650"
     CDS             complement(570..2744)
                     /locus_tag="VLL76_00650"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase"
                     /protein_id="HSV28023.1"
                     /translation="MPTLANPITSGSWAPPETHYYACQCAECAAAMVNVKVKVLDPAD
                     APVSDVASAQAAALPYYTSALLYPQDWRWNADYAHGTAITVSYSFMSSNPGQYGGFRA
                     FSESEKAAARDALAEWAAVCNISFREVASGGQIAFGNADVGGASGMTLWQGTSGRYSG
                     WKTTHSDVYMSSTDSLSYGDGSFGYRALLHEVGHALGLKHTFDTSGNTLSGIEDTAQY
                     SVMSYDNPPSTPNTQPHTAQLYDIAAVQYLYGANKATNAGDTVHRVSNTKTEVFTIWD
                     GGGNDAIDAANHTRSVTIDLREGKFSSIGAGNNVAVAFGSVIEKAVGGAAADTIIGNN
                     AANVILGGGGADVLTGGGGADSFCFESLAQCGDTITDFLSGTDRIQLDAQAFGLSSGI
                     LDTSRFLKLGSTYNGANGSGSAWSAGDAVLVFDSAGNLYWDGNGAASGYTKVAGIQGG
                     GVTASDIVLAGDFTAPTPTPTPTPDPTPVPTNVTGTSGADTLSGAGGDITMAGGLGND
                     TYIVDSMGDKVIEYSLQGVDTIQSTLGYRLGTYTENLVLTGGNAVNGTGSAWHNQMTG
                     NDANNVLSGMGGNDTIKGMGGNDVLVGGSGQDVLTGGTGADTFRYLAKGDVTWAKYNL
                     TKGTLKGDTVTDFQSGTDKLWFDDVAFALAQGTTRDGVNFAKIGSAYNGTNAYGSDWL
                     AGKASVIVDATGTVYYDPNGKGAGYYVVATAANVHASDIVIA"
     gene            2937..3209
                     /locus_tag="VLL76_00655"
     CDS             2937..3209
                     /locus_tag="VLL76_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28024.1"
                     /translation="MENREMYDEINALIGAVSKALEVSETEVVTAIEQGRLGMEMLTD
                     ERGQNFISATLDGKNARIYQGAIFRQDDKPEAEDDGGCGGGCSCGH"
BASE COUNT          500 a         1120 c         1216 g          599 t
ORIGIN      
        1 aacaatgccc aattgatgga attgcggccc ggctcgcccg gccgcgtcgc tcccggcatc
       61 accgtcgagg cggtggacga gaacggccgc ctgatgcggg cgggcgaacg cggaatgctg
      121 gcggtgtcgc cgggaacccc cggcgccttc ctgggctatc tgggcgagga cctgcccggc
      181 cgcctgcgcc tgcccaccgg ctggctgatg acggggcggc tgggcagccg cgacctcgac
      241 ggctatctgt ggcccgggga gttggcggtc ggcgatggct gcgcagtggt cgacggtacc
      301 cgcgtggcga tggacgaggt cgccgccgcc ttgcgcttcc acccccgcgt cgccgacgcc
      361 cgcgtggtgg cgcgcgggtc aagcctcagg gcgttcgtgg tggccgaggg cgatgccgcc
      421 tttgcccgcg agttacagga ttggatcgcc acccggcgcg gcctgggcga ggtgccccgc
      481 atcgagttcg tggcgaccct gccggacgac gacgcgggcg acgacatccc cacgctgagg
      541 atcccgtcgc ccgacgagcg ctggtagcct taggcgatca cgatatccga ggcatgcacg
      601 ttggccgccg tggcgacgac gtaatagccg gcgcccttgc cgttggggtc gtaatagacc
      661 gtgccggtgg catcgacgat gacgctggcc ttgcccgcca gccagtcgct gccataggcg
      721 ttggtgccgt tataggcgct gccgatcttg gcgaagttga cgccgtcgcg ggtggtgcct
      781 tgcgccaggg cgaaggcgac gtcgtcgaac cacagcttgt ccgtcccgct ctggaagtcg
      841 gtgacggtgt cgcccttcag ggtgcccttg gtcaggttgt acttggccca ggtgacgtcg
      901 cccttggcca gatagcggaa ggtgtcggcg ccggtcccgc cggtcagcac gtcctggccc
      961 gagccgccga ccagcacgtc gttgccgccc atgcccttga tggtgtcgtt gccgcccatg
     1021 cccgacagca cgttgttggc gtcgttgccg gtcatctggt tgtgccaggc cgagccggtg
     1081 ccgttgacgg cattgccgcc ggtcagaacc aggttctcgg tgtaggtgcc cagccggtag
     1141 cccagcgtgc tctggatggt gtcgacgccc tgcaacgaat actcgatcac cttgtcgccc
     1201 atggaatcga cgatgtaggt gtcgttgccc agcccgccgg ccatggtgat gtcgccgccc
     1261 gcgcccgaca gggtgtcggc gcccgaggtg ccggtgacgt tggtgggaac tggggtcggg
     1321 tcgggtgttg gcgtcggtgt cggcgtcggg gcggtgaagt cgccggccag cacgatgtcc
     1381 gaggccgtca cgccgccgcc ctggatgccg gcgaccttgg tgtagcccga ggcagcgccg
     1441 ttgccgtccc aatacaggtt gccggcgctg tcgaacacca gcacggcgtc accggcgctc
     1501 caggcgctgc ccgagccgtt ggcgccgttg tacgtgctgc ccagcttgag gaagcggctg
     1561 gtgtcgagga tgcccgacga caggccgaac gcctgggcat ccagctggat gcggtcggtg
     1621 ccgctgagga agtcggtgat ggtgtcgccg cattgggcca ggctttcgaa gcagaagctg
     1681 tccgccccgc cgccgccggt cagcacgtcg gcgccgccgc cgcccaggat gacgttggcc
     1741 gcattgttgc cgatgatggt gtcggccgca gcgccgccca ccgccttctc gatcacgctg
     1801 ccgaacgcca ccgccacgtt gttgccggcg ccgatgctcg agaacttgcc ctcgcgcagg
     1861 tcgatggtga ccgagcgggt atggttcgcg gcgtcgatgg cgtcattgcc accgccgtcc
     1921 cagatggtga acacctcggt cttggtgttc gacacccggt gcacggtgtc gcccgcgttg
     1981 gtcgccttgt tggcgccgta caggtactgg accgccgcga tgtcgtacag ctgcgcggtg
     2041 tgcggctgcg tgttgggggt ggaaggcggg ttgtcgtagc tcatcacgct gtattgcgcg
     2101 gtgtcctcga tgcccgacag cgtgttgccc gacgtgtcga aggtgtgctt gaggcccagg
     2161 gcatggccga cctcgtgcag cagggcgcga tagccgaagc tgccgtcgcc gtagctcagg
     2221 ctgtcggtgc tgctcatgta gacgtcggag tgggtggtct tccagccgga atagcggccc
     2281 gacgtcccct gccacagcgt catgcccgag gcgccgccca catcggcgtt cccgaaggcg
     2341 atctggccgc cggaagcgac ctcgcggaag ctgatgttgc agacggcggc ccattccgcc
     2401 aaggcgtcgc gggcggcggc cttctcgctc tcgctgaagg cgcggaagcc gccgtactgg
     2461 ccggggttgg acgacatgaa gctgtagctg acggtgatcg cggtgccgtg ggcgtaatcg
     2521 gcgttccagc gccagtcctg gggatagagc agggcgctgg tgtaataggg cagggcggcc
     2581 gcctgggccg aggccacgtc cgagacgggc gcgtcggcgg ggtccagcac cttgaccttg
     2641 acgttcacca tggcggcggc gcactcggcg cattggcagg cgtagtaatg agtctcgggc
     2701 ggagcccacg agccggaggt gatcggattg gcgagggtcg gcacggttgc ttcctccatc
     2761 ggatagagcc atcgattgcg cgactgaccc tatcgatggc ccctgaaccg ggccttaaga
     2821 cgatctgggc aaagaaaggg cgaagcggtg acatttaggg gacacgtgcc cgatgcgtga
     2881 cttcggcatc cgcttggcgt tatggtccgc gtccccgcgc atggaaggaa ggcatcatgg
     2941 aaaaccgcga gatgtacgac gagatcaacg ccctgatcgg cgcggtgtcg aaggcgctcg
     3001 aggtcagcga gaccgaggtc gtgaccgcca tcgagcaggg ccgcctgggc atggagatgc
     3061 tgaccgacga acgcggccag aacttcatct cggccaccct cgacggcaag aacgcccgca
     3121 tctaccaggg cgccatcttc cgccaggacg acaagcccga ggccgaggac gacggcggtt
     3181 gcggcggcgg ctgctcgtgc gggcactgac ccccctttaa cccatccgcg cacgtgccca
     3241 cctcttcgga tggatatctc catccggagg caacggccat gcaaacggtc tcgtccaccc
     3301 attcccatgc cctgccgggc gttcgcagca tcacgctcga tcacccctgg aactggcttt
     3361 cggccggctg gctcgacatg accatcacac cgatggtcag ctatctctac ggcgccgcct
     3421 tcgccgccat cggct
//
LOCUS       DATIKR010000042         1771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_97482, whole genome shotgun sequence.
ACCESSION   DATIKR010000042 DATIKR010000000
VERSION     DATIKR010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97482"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(671..>1771)
                     /locus_tag="VLL76_00660"
     CDS             complement(671..>1771)
                     /locus_tag="VLL76_00660"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSV28025.1"
                     /translation="GYRVVRGVVDGKGRNVNGVREINEAEAEVIRRIYREYAQGRKIL
                     EIVEGLNHDGIPAPAGGLWKRNAIMGGAAKQEGILRNEIYLGKLIANRHHVVRDPVTN
                     RKRFVLNPESQWTKVDVPHLRIITDDLWAAARKRDRPRPSEAQIAEPPKPRILTVHNQ
                     HALTGWVKCGWCGGTKQLANESRYLCSTHRYAKKCRNSRGTKELVLMTATFEALRSRV
                     VDGNDFRARFTKAVAREAKRADKLAKQVVDLEGRIGRLMVAIERGVDAEHTTQRVLVL
                     QNDLARLRHDLQAEQMPPLPEEAAIRATLVRAITDVEMSRDVERTRLMFEQVLSEIVL
                     TPVPDRPRGETVKITLREEGWPEFWRLITATR"
BASE COUNT          285 a          608 c          547 g          331 t
ORIGIN      
        1 gaccgtgatg ttctttccgc cgccctcgcc ttgctggtcg agatcaagag caaggcgtgc
       61 cacacccgcc gattcatcga gcatccaagt gcctgaacgg cattgagggc gacgtggagg
      121 agttcttgaa ccaggtcgcg cttgacctcc ctgacatcgc caaagcggcg ggctggcgga
      181 tgaccccgga gtttgccgcc gacaacggca tcgacgacga cagcgcgtcc tgaagatttg
      241 gaggtagtca tgggccgcag tgagcattgt ctgaaatgca agcataagtg ctccatttgg
      301 gggaacggct ggcacgaatg cgcggcgact ggctggcgct actacagccc cgtttcctga
      361 agatttgagc cgcaacccga aagaggggat ggaccatggc cgacgcaacc gaccttgtag
      421 ccgctggcag cgcccccggc gccctcgctc gcctcgacgc cggcatggtc ctatcggccg
      481 ccggcgcagc accaggtgga gacagcggca cggcgcccgc ccttcgggac ggatcgaccg
      541 cgccggcacc agggcgcgcc cggggcggct tcgccgctgt agccccggga cgacgccccc
      601 gccggcctat cggccgccgg cgcagcacca ggtggagaca gcggcacggc gcccgcctca
      661 gcgctacgcg ctagcgagtg gcggttatca gtcgccaaaa ttccggccac ccttcttcac
      721 gcaaagtgat cttgaccgtc tctccgcgcg gccggtcggg gaccggggtc aatacgattt
      781 ccgacaacac ctgttcgaac atcagccgcg tgcgttccac gtcgcgggac atttccacgt
      841 ctgtgatcgc gcggaccagg gtggcgcgga tcgcggcctc ctcgggcagt ggcggcatct
      901 gttccgcctg caaatcatga cgcagccgcg ccaggtcgtt ctgtaacacc aggacgcgct
      961 gcgtcgtgtg ctctgcgtca acaccgcgtt cgattgccac catcagccga ccgatccgcc
     1021 cctccaggtc gacgacctgc ttcgctagct tgtcggctcg ctttgcctcg cgtgcgactg
     1081 cctttgtgaa gcgcgcccgg aagtcgttgc catcgacgac ccgagatcgc aacgcctcga
     1141 acgttgccgt catcagcacc agttccttcg tgcctcgcga attgcggcac ttcttggcgt
     1201 agcgatgcgt cgaacacagg tagcgcgatt cgttcgccaa ctgcttcgtc ccgccgcacc
     1261 agccgcattt cacccagccg gtcagggcgt gctggttgtg gaccgtcagg atgcgcggct
     1321 tcggtggctc ggctatctgt gcttcggaag gccgagggcg atcacgcttg cgcgcggccg
     1381 cccacagatc gtccgtgatg atgcgcagat ggggtacgtc aacctttgtc cactgcgatt
     1441 cgggattgag cacgaaccgc ttccggttcg tcaccgggtc gcgcaccaca tggtggcgat
     1501 tggcgatcag cttgcccagg tagatctcgt tccgcaggat gccttcctgc ttcgcggcgc
     1561 cgcccatgat ggcattgcgc ttccacaggc ccccagcggg cgctgggatg ccgtcgtggt
     1621 tcagcccctc gacgatttcg agaattttcc gcccctgggc gtattcccga tagatgcgcc
     1681 ggatcacctc ggcttcggcc tcgttgatct cgcgcacgcc gttgacgttt cgccccttgc
     1741 catccaccac gccgcgaacc acccggtagc c
//
LOCUS       DATIKR010000043         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_37052, whole genome shotgun sequence.
ACCESSION   DATIKR010000043 DATIKR010000000
VERSION     DATIKR010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37052"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VLL76_00665"
     CDS             complement(<1..408)
                     /locus_tag="VLL76_00665"
                     /inference="COORDINATES: protein motif:HMM:TIGR02481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin family protein"
                     /protein_id="HSV28026.1"
                     /translation="MQPLQDGRKTPHKPLPWLESFGVGAKHIDDEHRDMIKGCNDLCA
                     MALRGARWRDLRVMAAELIATIEQHFVSEEALFPLICFPETAQHLSEHENIRRRLGHL
                     LDRQRADDTFLDRAIALRDMTIEHILRHDIGIKT"
     gene            complement(502..663)
                     /locus_tag="VLL76_00670"
     CDS             complement(502..663)
                     /locus_tag="VLL76_00670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28027.1"
                     /translation="MHPLVRLADTLLDWIDRDRERHQLAALDDRAAEDVCVDRATVTA
                     ETDKPFWRA"
     gene            767..>1893
                     /locus_tag="VLL76_00675"
     CDS             767..>1893
                     /locus_tag="VLL76_00675"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HSV28028.1"
                     /translation="MSSWIPDLSGRKGPLYRAIVDTIAGDIAAGRLRPGDRLPTHRDL
                     AWRLKVTVGTVARAYAEAERQGLLSGEVGRGTFVRDNNRDGWPAINQFMDPVLAGRGG
                     IINMALNRPSHDQGASVIGPALEILARRADLPQVLAYNLEPAFPRHRAAAARWLEWEG
                     LPTSPDQIVVGVGSQQCLIGALAATTHPGDTVLVEDFTYPGIKSAASLLGRQLVPLPT
                     DEGGLIPDEVERAFAERPGRVLYTIATVHNPLNVTLSADRRRAIARSARRHDAFIIED
                     GIHRFLHPDAPDPFRALAPDNALYVTALAKCVSPGLRVGFLAIPERLRGRAEAAVGAT
                     TLTLATLLIEVAAMLIEDGSAFALAEAQRAESAARVELAAG"
BASE COUNT          272 a          659 c          644 g          318 t
ORIGIN      
        1 ggtcttgatg ccgatgtcat ggcgcaggat gtgctcgatg gtcatgtcgc ggagggcgat
       61 ggcgcggtcg aggaaggtgt cgtcggcgcg ctggcggtcc agcagatggc ccagccggcg
      121 gcggatgttc tcgtgttcgg acaaatgttg cgccgtctcg gggaagcaga tcagggggaa
      181 cagggcttcc tcgctgacga agtgctgttc gatggtggcg atcagttcgg ccgccatcac
      241 ccgcagatcc cgccagcggg cgccgcgcag cgccatggcg cacaggtcgt tgcagccctt
      301 gatcatgtcg cgatgttcgt cgtcgatatg cttggcgccg acgccgaagg attcaagcca
      361 cggcaggggc ttatgggggg tcttgcggcc atcctgtagt ggttgcacga acgagcactc
      421 ccaatttatg gtcgcatttt accgcgactt ggggcgtgct cctatagggt ggatgcccga
      481 tgccggtgtt tggtcgtggg gtcaggcgcg ccagaacggc ttgtcggtct cggccgtcac
      541 cgtggcgcgg tcgacgcaca catcctcggc ggcgcggtcg tccagcgccg caagctggtg
      601 gcgttcgcgg tcgcggtcga tccagtccaa cagcgtgtcg gcaaggcgga ccaggggatg
      661 cattgaaccc atccaattcc atgtcatcat ggtgcatttc ctccttcggc accatgattg
      721 actcattgct tgaccgccgg tgggtgtcaa tgtgaacatt gacaccatgt caagctggat
      781 ccccgacctg tcgggccgca agggcccgct ctaccgtgcc atcgtcgaca ccatcgccgg
      841 cgacatcgcc gccggccgcc tgcgccccgg cgaccgcctg cccacccacc gagacctggc
      901 gtggcggctg aaggtgacgg tgggcaccgt ggcgcgcgcc tatgccgagg ccgagcgcca
      961 gggcctgctg tcgggcgagg tcgggcgcgg caccttcgtg cgcgacaaca accgcgacgg
     1021 ctggccggcc atcaaccagt tcatggaccc ggtcctggcc gggcgcggcg gcatcatcaa
     1081 catggccctg aaccggccgt cgcacgacca gggggcctcg gtgatcgggc cggcgctgga
     1141 gatcctggcg cggcgggccg acctgccgca ggtgctggcc tacaacctgg aacccgcctt
     1201 tccccgccat cgcgccgccg ccgcgcgctg gttggaatgg gagggcctgc ccacgtcgcc
     1261 cgaccagatc gtggtgggtg tcggcagcca gcaatgcctg atcggcgccc tggcggccac
     1321 cacccatccc ggcgacaccg tgctggtcga ggacttcacc tatcccggca tcaaatcggc
     1381 ggccagcctg ctgggccgcc aattggtgcc gctgcccacc gacgagggcg ggctgatccc
     1441 cgacgaggtc gagcgtgcct tcgccgagcg ccccggccgg gtgctctaca ccatcgccac
     1501 cgtgcacaat ccgctcaacg tgacgctgtc ggccgaccgc cgccgcgcca tcgcccgatc
     1561 cgcccgccgc cacgacgcct tcatcatcga ggacggcatt caccgcttcc ttcaccccga
     1621 cgcgcccgac cccttccgag ccctggcgcc ggacaacgcg ctctatgtga ccgccctggc
     1681 gaaatgcgtg tcgccggggc tgcgcgtggg cttcttggcc atccccgaac gcctgcgcgg
     1741 ccgggccgag gcggcggtgg gggcgaccac gctgacgctg gcgacgctgt tgatcgaggt
     1801 cgccgccatg ctgatcgagg acggctccgc ctttgccctc gccgaggccc agcgcgccga
     1861 atccgcggcg cgggtcgagc ttgccgccgg cat
//
LOCUS       DATIKR010000044         3290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_49025, whole genome shotgun sequence.
ACCESSION   DATIKR010000044 DATIKR010000000
VERSION     DATIKR010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49025"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VLL76_00680"
     CDS             complement(<1..184)
                     /locus_tag="VLL76_00680"
                     /inference="COORDINATES: protein motif:HMM:NF013671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster biosynthesis family protein"
                     /protein_id="HSV28029.1"
                     /translation="MLSLTDRAVTAIKSVCNSPDQGLRIMVVTGGCSGLQYRMGLETE
                     AFDDDQVLEFSGVKVYV"
     gene            complement(420..3047)
                     /locus_tag="VLL76_00685"
     CDS             complement(420..3047)
                     /locus_tag="VLL76_00685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28030.1"
                     /translation="MAFVSGDDDWLIQALDHARHGIVLLDSTHRIRIANRPFLDLYGL
                     GEDDVAGRTLADLTALLAERGEHAVAATWISGPCQFRRADGTVIEVTSKRLPDGRIVL
                     NHLDVTPRARVEAELFDLRETLGQAHRLANMGMWEYDPMTQMLTLSREHGQMLLGEPV
                     ETRMPIAEYTQRYIHPDDWPILAEREARRHQDAKRIGLSEQFEYRAQLPGQEVRHFAV
                     TSLVRPDKFVGVTQDVSERKRMVEKLEASERRLRTILDTTPLPVVITRRADATVIYAN
                     QAFYDLFELDPDRPGLVNATSCYDDPNDRQRLHELVKANGVVHGFEALGRTGKGRQFW
                     ASVSAAAVDLDDLPCLFVAVNDISKLKRQEEDLRAAKDAAEEAARAKSEFLAMMSHEI
                     RTPMNGIIGMARMVLETDLTAEQRDWVDTISHSGDALLTILNDILDFSKLEAGKLELE
                     TVTFDPRRLVDGVVDLMRSRAEEKRLSLAVTVDPSVPAWLAGDPTRLRQILLNLVGNA
                     VKFTDAGGVTVRLAAEPGDRRVKLRVAVGDTGIGIPPEALKRLFTPFSQVDGTIARRF
                     GGTGLGLAICRRLVELMGGDISVDSAPGQGSVFTFAITVAEADHPPPPALVDAPPLPP
                     LSILLVEDNLVNQKVAKAMLERYGHSVVIATDGFEAVDAVAKAAQGRYDVVLMDVQMP
                     HLDGLGATQRIRALPGPAAAIPIVAMTANALKGDSERCLEAGMDGYVAKPVVPAPLFA
                     EIARVLSLSAAPCAPAPPPARAGRRVLDHAVLDQLTDAVGREFIAEVLQSGLAHMQRM
                     RAELAAARDDADQIRFLAHDIKSASHSIGLEALGTLAAEVEKAAREGRPEVAIVLAGG
                     LDDLLDEAVEVLSPMVDVA"
     gene            complement(3180..>3290)
                     /locus_tag="VLL76_00690"
     CDS             complement(3180..>3290)
                     /locus_tag="VLL76_00690"
                     /inference="COORDINATES: protein motif:HMM:NF016762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_process: GO:0009399 - nitrogen fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen fixation protein NifQ"
                     /protein_id="HSV28031.1"
                     /translation="QLCGLEGIAVCKSPICDACDDFAVCFGAEEGASLLA"
BASE COUNT          506 a         1062 c         1182 g          540 t
ORIGIN      
        1 cgacgtagac cttgacgccc gagaactcca gcacctggtc gtcgtcgaag gcttcggtct
       61 cgaggcccat gcggtattgc aggcccgagc atccgccggt cacgaccatg atgcgcaggc
      121 cctggtcggg cgagttgcag acgctcttga tggcggtcac ggcgcggtcg gtcagggaaa
      181 gcatgctggt cctcctcggt ggcgggtaag gtgtcccgcc aagggaagaa gcaagaccga
      241 tgccacacgg ggacgcccac cccttggccg tcatccccgc gaaagcgggg atccatgtgg
      301 ccgcgaaaaa cgttgcgcgg acaatgggtt gaggccaagc cggacggacc catggattcc
      361 cgctttcgcg ggaatgacgg aagaggatcg gccgacattg tcgggtttgc gacagggcgt
      421 catgccacat cgaccatggg cgacagcacc tcgaccgcct cgtcgagcag gtcgtcgagg
      481 ccgccggcca ggacgatggc gacctcgggc cggccctcgc gcgccgcctt ttccacctcg
      541 gccgccaggg tgcccagggc ttccaggccg atgctgtgcg acgcgctctt gatgtcgtgg
      601 gcgaggaagc ggatctggtc ggcgtcgtcg cgggcggcgg ccagttcggc gcgcatgcgc
      661 tgcatgtggg ccaggccgct ctgcagcacc tcggcgatga attcgcggcc caccgcgtcg
      721 gtgagctggt caagcaccgc atggtcgagc acccggcggc cggcgcgggc cgggggcggg
      781 gccggcgcgc agggcgccgc cgacaggctg agcacgcggg cgatctcggc gaacagcggg
      841 gcgggcacca ccggcttggc gacatagccg tccatgccgg cttccaggca gcgctcggaa
      901 tcgcctttca gggcgttggc ggtcatggcg acgatgggga tggcggcggc cgggccgggc
      961 agggcgcgga tacgctgggt cgcgcccagg ccgtcgagat ggggcatctg cacgtccatc
     1021 agcaccacgt cgtagcggcc ctgcgcggcc ttcgccaccg cgtccaccgc ctcgaagccg
     1081 tcggtggcga tgaccaccga atggccgtag cgttccagca tggccttggc gaccttctgg
     1141 ttcaccagat tgtcctcgac cagcaggatc gacagcggcg gcaatggcgg ggcgtccacc
     1201 aaggcgggcg gcggcgggtg gtcggcctcg gccaccgtga tcgcgaaggt gaacacgctg
     1261 ccctggccgg gcgcgctgtc caccgagatg tcgccgccca tcagctcgac caagcggcgg
     1321 cagatggcga ggcccaggcc ggtgccgccg aaccgccggg cgatggtgcc gtccacctgc
     1381 gagaacgggg tgaacaggcg cttcagcgcc tcgggcggga tgccgatgcc ggtgtcgccc
     1441 acggcgacgc gcagcttgac ccggcggtcg cccggttcgg ccgccagcct gacggtgacg
     1501 ccgccagcgt cggtgaactt gacggcgttg cccaccaggt tcagcaggat ctggcgcagc
     1561 cgggtgggat cgccggccag ccaggcgggc accgagggat cgacggtgac ggccagggac
     1621 agccgctttt cctcggcgcg cgaccgcatc aggtcgacca cgccatcgac cagccggcgc
     1681 ggatcgaagg tgaccgtctc gagctcgagc ttgccggcct ccagcttcga gaagtccagg
     1741 atgtcgttga ggatggtcag cagggcgtcg ccggaatggc tgatggtgtc gacccagtcg
     1801 cgctgttcgg ccgtcaggtc ggtttccagc accatgcggg ccatgccgat gatgccgttc
     1861 atgggagtgc ggatctcgtg gctcatcatg gccaggaact cgctcttggc ccgcgccgct
     1921 tcctcggccg cgtccttggc ggcgcgcagg tcctcttcct ggcgcttgag cttcgagatg
     1981 tcgttgaccg cgacgaacag gcagggcagg tcgtcgaggt cgaccgccgc cgccgacacg
     2041 ctggcccaga actggcgtcc cttgccggtc ctgcccaacg cttcgaagcc atgcacgacg
     2101 ccattggcct tgaccagttc gtgcaggcgc tgccggtcgt tggggtcgtc gtagcaggag
     2161 gtggcgttga ccagcccggg gcggtcgggg tccagctcga acaaatcgta gaacgcctgg
     2221 ttggcgtaga ttaccgtggc gtcggcgcgg cgggtgatga ccaccggcaa cggcgtggtg
     2281 tcgaggatgg tgcgcaggcg gcgttcgctg gcctccagct tttccaccat gcgcttgcgc
     2341 tcgctgacgt cctgggtgac gccgacgaac ttgtcggggc ggaccagcga ggtcaccgcg
     2401 aaatgccgca cctcttgccc cggcaattgc gcccggtatt cgaactgctc ggacaggccg
     2461 atgcgcttgg cgtcctggtg gcgtcgggct tcgcgctcgg ccaggatcgg ccagtcgtcg
     2521 gggtggatgt agcgctgggt gtattccgcg atgggcatgc gggtctcgac cggttcgccc
     2581 agcagcatct ggccgtgctc gcggctcagc gtcagcatct gggtcatggg gtcgtattcc
     2641 cacattccca tgttggcgag gcggtgggcc tggcccagcg tctcgcgcag gtcgaacaat
     2701 tccgcctcga cgcgggcgcg cggcgtgaca tcgaggtggt tgagcacgat ccggccgtcg
     2761 ggcaggcgct tcgaggtgac ttcgatgacg gtgccgtcgg cgcggcggaa ttggcagggg
     2821 cccgagatcc aggtggcggc gaccgcatgt tcgccgcgtt cggccagcag ggcggtgagg
     2881 tcggcaaggg tccgcccggc cacatcgtcc tcgcccaatc cgtagagatc gagaaaaggc
     2941 cggttggcga ttcgtatccg atgggtcgaa tccagcagga ctatgccgtg gcgcgcatgg
     3001 tccagggcct ggatcagcca gtcgtcatcc cccgagacga aagccatccc aactcctcga
     3061 ttgcgccgac cccccgggcg gcgttgcggt caaggagagc attttagcca catcatttgc
     3121 ggttgaatag agtttcagtt gcaaatgtgc gcagaaatcc tacctctcgg gtgttcaccc
     3181 taggccaaca ggctggcccc ctcttcagcg ccgaagcaaa cggcgaagtc gtcgcaagcg
     3241 tcgcagatgg gggatttgca gacggcgatg ccttcgaggc cgcaaagctg
//
LOCUS       DATIKR010000045         4401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_170324, whole genome shotgun sequence.
ACCESSION   DATIKR010000045 DATIKR010000000
VERSION     DATIKR010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4401
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170324"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..467
                     /locus_tag="VLL76_00695"
     CDS             120..467
                     /locus_tag="VLL76_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HSV28032.1"
                     /translation="MATLGTLLYTWMNGKLVGTDAGGNRYYVARSAPKGERAKRWVVY
                     NGEVEASRVPAEWHAWLHYTADAPLKGDAKSWQKPHEINKTGTAEAYLPPGHDLRGGR
                     RERAAGDYEAWQP"
     gene            493..987
                     /locus_tag="VLL76_00700"
     CDS             493..987
                     /locus_tag="VLL76_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990531 - phospholipid-translocating
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0005548 - phospholipid transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HSV28033.1"
                     /translation="MVTKGGWRDTITGAIVVSVAAVMLSLVYVKDSSPGADSQAGYLV
                     TARFNRADGVGVGTTVRMSGVPVGKVVAQSLDPQFRAVATLQVESTVQLTADTAAAIL
                     TDGLLGAKYIELQPGADEAVLKPGSEIAFTQDAMVIEELLDKIIQQGRAKRGWLDKPL
                     PTAN"
     gene            1007..1516
                     /gene="mlaD"
                     /locus_tag="VLL76_00705"
     CDS             1007..1516
                     /gene="mlaD"
                     /locus_tag="VLL76_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HSV28034.1"
                     /translation="MGRNLIETIMGAVVLMVAGFFLVFAYRHADLEEVQGYELKAQFA
                     SVGGLDVGSDVRINGIKVGTVNSHALDPATFNAIVTMTIMPSIQLPQDTVATIATEGL
                     LGGKFVKLEPGRAPDRIAAGGAIAHTKDFKSIEEMVGQLIFLATADQPQAAPAPAPAE
                     PAPAPEPQQ"
     gene            1513..1887
                     /locus_tag="VLL76_00710"
     CDS             1513..1887
                     /locus_tag="VLL76_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HSV28035.1"
                     /translation="MRLAAALLAAGLAMPACALAQGAGDLSLDTAILGGLDKVTAKVV
                     SIEAPVGQPVRFGTLEIIARACKKRRPEESPESAAFLDVWELKPGFPAQSLFRGWMFA
                     SSPALSAMEHPVYDIWVLDCRN"
     gene            complement(2006..2383)
                     /locus_tag="VLL76_00715"
     CDS             complement(2006..2383)
                     /locus_tag="VLL76_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28036.1"
                     /translation="MTWRLAPLAGTLLLTGCMWADNTGLHEGVSPPNAGVALMNLEVL
                     SVINTKKTIGDHVATWVTGKDCSTIRAQREGVWCVDWPGPPPPPQQVYCYASLAKPSC
                     FSQPYTEGNDRLIGFVPAPTPIR"
     gene            2474..3025
                     /locus_tag="VLL76_00720"
     CDS             2474..3025
                     /locus_tag="VLL76_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007797163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSV28037.1"
                     /translation="MAVETPVCDFGWPAPDFRLPGIDGRDTSLADIRGANGTLVMFIC
                     NHCPYVKAVVDRLVRDARDLQALGIGVAAIMSNDAALYPEDSFDNMKAFAARHGFTFP
                     YLYDESQAVARAYDAVCTPDFFGFEAGLGLQYRGRLDASKREAGPADCRRELYEAMKM
                     VAETGKGPAEQIPSMGCSIKWRG"
     gene            3102..3785
                     /locus_tag="VLL76_00725"
     CDS             3102..3785
                     /locus_tag="VLL76_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28038.1"
                     /translation="MTKNTDDATSDLLIKEVDEELRQDQLNELWKRYGSLFVGGAVAL
                     VLGVAGWQGWTAWQTKQGLESSHRYAEAQRLVEQGKTTEAADSIAKLAAEGASGYKLL
                     STLERADLRLKAGDTAGAIQIYDALIADGGIDEVYRDLVRLKAAYLKLDSADAAQVAK
                     SVEALTAESSPWRHSAREIQALAALKQGDHGKAADIFRKLAEDPAAPEGIKSRAAAMA
                     IAANGKAKG"
     gene            3813..>4401
                     /locus_tag="VLL76_00730"
     CDS             3813..>4401
                     /locus_tag="VLL76_00730"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV28039.1"
                     /translation="MNRRFAWVVLASLAVTGCSSWFGDKEPPPLPGKRVSVLNRDKTL
                     EPEVKGEHAEIKLPPPEPNDDWPQAGGYANHAMHHMEIGDTIDRAWRTGIGSGSGKRA
                     KLLAQPIVAEGKVFTLDADSEVQAVDTKTGSRVWSADITPKGEDDTFSGGGIAYEDGY
                     LFVSTGFAQVVAMEAATGKVAWRQTLSGPMRGAPTV"
BASE COUNT          768 a         1497 c         1472 g          664 t
ORIGIN      
        1 gaccaacgcc ggcacggcag cggcattccg ccgccgccgt gccggaccca ctggacggaa
       61 ccggcccgtt ttgccatagt ccgagcccac cgaacctccc ataagaatcg gggactgaaa
      121 tggcgacttt gggcaccctg ctttacacct ggatgaacgg caagctggtc ggcaccgatg
      181 ccgggggcaa ccgctattat gtcgcccgca gcgcccccaa gggtgagcgc gccaagcgct
      241 gggtcgtcta caatggcgag gtcgaggcgt cgcgggtgcc ggccgagtgg catgcctggc
      301 tgcactacac cgccgacgcg ccgctgaagg gcgacgcgaa gtcctggcag aagccgcacg
      361 agatcaacaa gaccgggacc gccgaggcct atctgccgcc gggccacgac ctgcgcggcg
      421 gccggcgcga gcgcgccgcc ggcgattacg aagcctggca gccctaaggg gccggcaaac
      481 gggggaagcc gcatggtgac caagggcggg tggcgcgaca ccatcaccgg cgcgatcgtg
      541 gtatcggtcg ccgccgtcat gctgtcgctg gtctacgtca aggacagcag ccccggcgcc
      601 gattcccagg ccggctatct ggtcaccgcc cgcttcaacc gcgccgacgg cgtcggtgtc
      661 ggcaccacgg tgcggatgtc gggcgtgccg gtcggcaagg tggtggcgca aagcctggat
      721 ccgcaattcc gcgccgtcgc cacgttgcag gtggaatcga cggtgcaact gaccgccgac
      781 accgccgccg ccatcctgac cgacggcctg ttgggcgcga aatacatcga attgcagccg
      841 ggcgccgacg aggccgtcct caagcccggc tcggaaatcg cgttcaccca ggacgccatg
      901 gtgatcgagg aattgctgga caagatcatc cagcagggcc gagccaagcg cggctggctg
      961 gacaagccgc tgccgacggc caactgacca agggggaagg acccgcatgg gacgcaatct
     1021 gatcgagacg atcatggggg ccgtggtcct gatggtggcc ggcttcttcc tggtgttcgc
     1081 ctatcgccac gccgacctgg aagaggtcca gggctatgag ctgaaggccc agttcgccag
     1141 cgtcggcgga ctcgacgtcg gctcggacgt gcgcatcaac ggcatcaagg tcggcaccgt
     1201 caacagccac gcgctggacc ccgccacctt caacgccatc gtcaccatga ccatcatgcc
     1261 gtcgatccag ttgccgcagg acaccgtggc gaccatcgcc accgagggac tgctgggcgg
     1321 caagttcgtc aagctggagc ccggccgcgc ccccgaccgc atcgccgccg gcggcgccat
     1381 cgcccatacc aaggacttca agtccatcga ggaaatggtc ggtcagttga tcttcctcgc
     1441 caccgccgac cagccccagg cggctcccgc cccggctccg gccgagcccg cgcccgcgcc
     1501 ggaaccccag caatgaggct ggcggccgca ttgctggccg ccggactggc catgccggcg
     1561 tgcgccctgg cccagggggc gggcgatctg tcgctggaca ccgccatcct cggcggcctc
     1621 gacaaggtca ccgccaaggt ggtcagcatc gaggcgccgg tgggccagcc ggtgcgcttc
     1681 ggcaccctgg aaatcatcgc ccgcgcctgc aagaagcgcc ggcccgagga aagcccggaa
     1741 agcgccgcct tcctcgatgt ctgggaactc aagcccggct tcccggcgca aagcctgttc
     1801 cgcggctgga tgttcgcctc cagcccggcg ctgtctgcga tggaacaccc ggtctacgac
     1861 atctgggtcc tggactgccg gaattaggcc gcaagtgctg ccgggcggcg gccaggtaat
     1921 ttcaccacca agacaccaag atatcgtgcc gggaggcgcc accttcgccc caggactgct
     1981 cgcttggtgt ccttcgtggt tcgattcacc gaatgggagt cggcgccggg acgaagccga
     2041 tcaggcggtc gttgccttcg gtgtagggct gcgagaagca gctgggcttg gccagcgacg
     2101 catagcaata gacctgctgg ggcggcggcg gcggtcccgg ccaatcgacg caccacacgc
     2161 cttcgcgctg ggcgcggatg gtggagcaat ccttgccggt gacccaggtg gccacatggt
     2221 cgccgatggt cttcttggtg ttgatgacgc tcaacacctc gagattcatc aacgcgacgc
     2281 ccgcgttggg tggtgacacg ccttcgtgga ggccggtgtt gtcagcccac atgcagccgg
     2341 tcagtagcag cgttcctgcc aggggggcga gtcgccaagt catttctatg accccttttg
     2401 ccgatcggct atattctccg cccaatgctt ttatgggtca attggaatcg ctcgaaaggg
     2461 ttaggaggca gagatggcgg tcgaaactcc ggtatgcgac ttcggctggc cggcgcctga
     2521 tttccggctg cccggcattg atggccgcga cacttcgctg gccgacatcc ggggcgccaa
     2581 cggcaccctg gtgatgttca tctgcaacca ctgcccctac gtcaaggcgg tggtcgaccg
     2641 gctggtgcgc gatgcccgcg acttgcaggc cctgggcatc ggcgtggcgg cgatcatgtc
     2701 caacgacgca gccctttacc ccgaggattc gttcgacaac atgaaggcgt tcgccgcccg
     2761 tcatggcttc accttcccct atctgtacga cgaaagccaa gcggtggcgc gggcctatga
     2821 cgccgtatgc accccggact tcttcggctt cgaggccgga ttggggctgc aatatcgcgg
     2881 tcgcctggac gcctcgaagc gcgaggccgg ccccgccgat tgccggcgcg agctgtatga
     2941 ggccatgaag atggtggccg agaccggcaa gggtccggcc gagcagatcc cgtccatggg
     3001 gtgcagcatc aaatggcgcg ggtgaggctg acgcacggcg ggtttgccaa cgcaggcccc
     3061 accgactatg ttacggccgg ttccaggctt gggagacgtc cttgaccaag aataccgacg
     3121 atgcgaccag cgaccttctg atcaaggaag tcgatgagga gcttcggcaa gaccagctca
     3181 atgaattgtg gaagcgctac ggcagcctgt tcgtgggcgg cgccgtcgcc ctggtgctgg
     3241 gcgtggccgg ctggcaaggc tggaccgcct ggcagaccaa gcaggggctg gaatccagcc
     3301 atcgctatgc cgaggcccag cgcctggtcg agcagggcaa gaccaccgag gccgccgatt
     3361 ccatcgccaa gctggccgcc gagggcgcct cgggctacaa gctgttgtcc acgctggagc
     3421 gcgccgacct gcgcctcaag gctggcgaca ccgccggcgc catccagatc tacgacgccc
     3481 tgatcgccga cggcggcatc gacgaggtct atcgtgacct ggtccgcctc aaggccgcct
     3541 acctcaagct cgattccgcc gatgctgccc aggtcgccaa gtcggtcgag gcgctgaccg
     3601 ccgaatcgag cccgtggcgc cattccgccc gcgagatcca ggccctggcc gcgctgaagc
     3661 agggcgacca cggcaaggcc gccgacattt tccgcaagtt ggccgaagac ccggccgcac
     3721 cggaaggcat caagagccgc gccgccgcca tggcgatcgc ggccaacggc aaggccaagg
     3781 gctagggccc ggggcaagga aggacgaccg ccatgaaccg tcgcttcgcg tgggtggtgc
     3841 tggcctcgct ggccgtcacc ggatgttcca gttggttcgg cgacaaggag ccgccgccgc
     3901 tgccgggcaa gcgcgtctcg gtgctcaacc gcgacaagac gctggagccc gaggtcaagg
     3961 gcgagcatgc cgagatcaag ctgccgccgc cggaacccaa cgacgattgg ccccaggccg
     4021 gcggctacgc caaccacgcc atgcaccaca tggagatcgg cgacaccatc gaccgcgcat
     4081 ggcgcaccgg catcggcagc ggctcgggca agcgtgccaa gctgctggcc cagcccatcg
     4141 tggccgaggg caaggtgttc acgctggacg ccgacagcga ggtccaggcg gtggacacca
     4201 agaccggctc gcgggtgtgg tcggccgaca tcacccccaa gggcgaggac gacaccttct
     4261 cgggtggcgg catcgcctac gaggatggtt acctgttcgt ctccaccggc ttcgcgcagg
     4321 tcgtcgccat ggaagccgcc accggcaagg tggcgtggcg ccagaccctg tcgggcccca
     4381 tgcgcggcgc gcccacggtg c
//
LOCUS       DATIKR010000046         4221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_49102, whole genome shotgun sequence.
ACCESSION   DATIKR010000046 DATIKR010000000
VERSION     DATIKR010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4221
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49102"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="VLL76_00735"
     CDS             <1..1144
                     /locus_tag="VLL76_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSV28040.1"
                     /translation="ALCVLVVAAFYVLITKPLIRITAAIAKVDPARPGAMLIDLPPGH
                     QNDEFGLLVGTMNTMLSKSQEGLDGRDKAEADLAALARDLERRVTERTAELAREKEGV
                     ERALAQLNLANFELEKANRFINDGIRYASRIQTALLPDQGALVGVVDELAVGWQPLDI
                     VGGDYYWAGAFGSKAVIAVMDCTGHGVPGAFMTAVVASSFSRILHHHGHEDPAEMLFQ
                     LNRLVKTALRQDRDSAVSNDGLDAGICVVDRAAGTVTYAGANLPMMVHDGDGFALVRG
                     DRMSLGYLDSPEDYRFASHQLTIRPGSAFYLFTDGVTDQVGGERRRLFGRNRLQQVLE
                     EVADLSLNEQMDVLFQRLARWRGDERRRDDMTFLAFRPQTGLTPPA"
     gene            complement(1128..2591)
                     /locus_tag="VLL76_00740"
     CDS             complement(1128..2591)
                     /locus_tag="VLL76_00740"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HSV28041.1"
                     /translation="MRLSRRQTLSGLLAGIALPTLSGCQMAPGTGRESFNLLSADDEA
                     KMGREAHPQIMKEFGGAYDDPALQAYVAGIGQRLVRASETPAAEYRFTVLNSDIVNAM
                     ALPGGYVYITRGLLALNGNEAELAGVLGHEIGHITARHSAQRYSRAMAANLGVGLLGA
                     VLGTPGVADIAQMGAAYWLSSYSQENEFEADSLGVRYVSRSGWHADAMATMLTKLREH
                     SRLEAVMAGRSPDSVDEHHFMSTHPRTVDRVQAAVKQSLGAPAQGQWGEAAFLDRVDG
                     MVWGDDPKQGIIRGRSFLHPDLGLRFDVPAGFRLVNSDRAVMARNQAGAVILFDGGAA
                     RGAGDMLAYMQRTWLPKVQLANGERIEINGMPAATATARGRTKQGQVDLRFVAVRFDG
                     DSVYRFTFATPPNQTAALGEDLRRTTYSLRPLSAEERAGIRPLRVKVVTVKAGDTAEA
                     LGGRMAMDSHRVEQFRLINGLDAGEQPRAGSRVKLVV"
     gene            complement(2607..3107)
                     /locus_tag="VLL76_00745"
     CDS             complement(2607..3107)
                     /locus_tag="VLL76_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HSV28042.1"
                     /translation="MTTFFTSDTHFGDHRVLNLYRRPFTSVAAMDEALVAAWNATVEP
                     DDEIWHLGDFAMPKVAAAVLARLNGRKHLVAGNNDPEAVRGLPGWASVADYAELSLDG
                     ARLVLCHYPFRSWNGMGKGALNLHGHSHGRMKPLPRQVDVGVDVWAMRPVTLAEIQAI
                     LPRRTS"
     gene            3279..>4221
                     /locus_tag="VLL76_00750"
     CDS             3279..>4221
                     /locus_tag="VLL76_00750"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV28043.1"
                     /translation="MTTNDNSAAARLQAYAAPRAMVAIVTPDAALRETLGQTLAPSYR
                     VSGFSDAATAARGAKPAAILVSESTREVEGVDAVAWLRRQTRLAGVPIVLCAMPGRPA
                     RGTAGRPDATFILPATGRDLLDLVSRLGNKAVEESWTALPPTPREALKRTLGVFNGIA
                     QLIGSGSPMDYKDVSHACSPILEVVRQAGHHFVFAGLRNHNDHSYVHSLRMSTLLALF
                     GHTIGLEEDSLMTLASAGLVHDIGKTVLPSEVMDKTSKLSPTEMEVAKSHVDATVRYL
                     SNHSNVPRAVVTIAGQHHERVDGSGYPLGLKGEQLNDL"
BASE COUNT          661 a         1484 c         1407 g          669 t
ORIGIN      
        1 cgccctgtgc gtgctggtgg tcgccgcgtt ctatgtgctg atcaccaagc cgctgattcg
       61 catcaccgcc gccatcgcca aggtcgatcc ggcgcggccc ggcgccatgc tgatcgacct
      121 gccgcccggc catcagaacg acgagttcgg cctgctggtc ggcaccatga acaccatgct
      181 gagcaagtcg caggagggcc tggacggccg cgacaaggcc gaggccgacc tggccgccct
      241 agctcgcgac ctggaacgcc gcgtcaccga gcgcacagcc gaattggcgc gcgagaagga
      301 gggtgtcgag cgcgccctgg cccagctcaa cctggccaat ttcgagctgg aaaaggccaa
      361 ccgcttcatc aacgacggta tccgctatgc cagccgcatc cagaccgcgc tgctgcccga
      421 ccagggcgcg ctggtgggcg tggtggacga gctggcggtg ggttggcagc cgctggacat
      481 cgtcggcggc gactattact gggccggcgc cttcgggtcc aaggcggtga tcgcggtgat
      541 ggactgcacc ggccacggcg tgcccggcgc cttcatgacg gcggtggtgg cctccagctt
      601 cagccgcatc ctgcaccatc acggccacga ggacccggcc gagatgctgt tccagttgaa
      661 ccgcctggtg aagaccgcgc tgcgccagga ccgcgactcg gcggtgtcca acgacggcct
      721 ggatgccgga atctgcgtcg tcgaccgcgc cgccggcacg gtgacctacg ccggcgccaa
      781 cctgcccatg atggtccatg acggcgacgg tttcgccctg gtccgcggcg accgcatgag
      841 cctgggctat ctggacagcc ccgaggacta ccgcttcgcc tcgcaccaac tgacgatccg
      901 gccgggctcg gcgttctatc tgttcaccga cggcgtcacc gaccaggtgg gcggcgagcg
      961 ccgccggcta ttcggccgca accgcctgca gcaggtgctg gaggaggtgg cggatctgtc
     1021 gctgaacgag cagatggacg tgctattcca gcggctggcg cgctggcgcg gcgacgaacg
     1081 ccgccgcgac gacatgacct tcctggcgtt ccgcccccag accggcctta caccaccagc
     1141 ttgacccgtg agccggcgcg cggctgttcg cccgcgtcga ggccgttgat caggcggaat
     1201 tgctccaccc tgtggctgtc catggccatg cggccgccca gcgcctcggc ggtgtcgccc
     1261 gccttgaccg tcaccacctt gacccgcagc ggccggatgc cggcgcgttc ctcggccgac
     1321 agcggccgca ggctgtaggt ggtgcggcgc aggtcctcgc ccagggcggc ggtctggttg
     1381 ggcggcgtgg cgaaggtgaa gcgatagacc gagtcgccgt cgaaccgcac cgccacgaag
     1441 cgcaaatcca cctgcccctg cttggtccgg ccgcgcgcgg tggcggtggc ggcgggcatg
     1501 ccgttgatct cgatgcgctc accgttggca agctgcacct tgggcaacca ggtgcgctgc
     1561 atgtaggcga gcatgtcgcc ggcaccgcgc gccgcgccgc cgtcgaacag gatcaccgcc
     1621 ccggcctggt tgcgcgccat caccgcgcgg tcgctgttga ccaggcggaa accggccggc
     1681 acgtcgaagc gcaagccgag gtcggggtgc aggaacgacc gcccgcggat gattccctgc
     1741 ttgggatcgt cgccccacac catgccgtcc acccggtcga ggaacgccgc ctcgccccat
     1801 tgcccctggg ccggcgcccc caggctttgc ttgacggcgg cctggacgcg gtcgacggtg
     1861 cgcgggtggg tggacatgaa gtgatgctcg tcgacgctgt cgggcgagcg gccggccatg
     1921 accgcctcga gccgcgaatg ctcgcgcagc ttggtcagca tggtcgccat ggcgtcggcg
     1981 tgccagcccg accggctgac gtagcggact cccagcgaat ccgcctcgaa ctcgttttcc
     2041 tgggaatagg acgacagcca ataggcggct cccatctggg cgatgtcggc gacgcccggc
     2101 gtgcccagca ccgcccccag caggccgacg cccaggttgg cggccatggc gcggctgtag
     2161 cgttgcgccg aatggcgggc ggtgatgtgg ccgatctcgt ggccgagcac gccggccagt
     2221 tccgcctcgt tgccgttgag cgccagcagg ccgcgggtga tgtagacata gccgcccggc
     2281 agcgccatgg cgttgacgat atcgctgttg agcacggtga agcggtattc ggccgccggg
     2341 gtctcgctgg cccgcaccag ccgctggccg atccccgcca cataggcctg cagcgccgga
     2401 tcgtcgtagg cgccgccgaa ttccttcatg atctggggat gcgcctcgcg gcccatcttg
     2461 gcctcgtcgt cggcgctcag caggttgaag ctttcacggc cggtcccggg cgccatctgg
     2521 cagccggaca gggtgggcag ggcgatgccg gccaaaaggc cggagagggt ctggcgtcgg
     2581 gaaagtctca tggctcgcgc gaaggtctat gacgtcctgc gcggaaggat agcctggatc
     2641 tcggcaagcg tcaccggccg catggcccag acgtccacgc ccacgtccac ctgccggggc
     2701 agcggcttca tgcggccgtg gctgtggccg tgcaggttca gcgcgccctt gcccatgccg
     2761 ttccacgagc ggaagggata atggcacagc accagccgcg cgccgtcgag gctcagttca
     2821 gcgtagtcgg cgacgctggc ccagccgggc agcccccgca ccgcctcggg atcgttgttg
     2881 cccgccacca gatgcttgcg gccgttgaga cgcgccagca ccgccgccgc caccttgggc
     2941 atggcgaaat cgcccaggtg ccagatttcg tcgtccggct ccaccgtggc gttccacgcg
     3001 gcgaccagcg cttcatccat cgccgccacc gaggtgaacg gccgccggta taggttcaag
     3061 acccgatggt cgccgaaatg ggtgtcgctg gtaaagaatg tcgtcattga gccccccgat
     3121 gaccagctct ggcgcgatac gcacagttac gtcgcagaat taaagccatc tttgccatgc
     3181 ccgatgcgca cagttaatac cttcgtatta gctattttgg ttaacatacc tttaacggac
     3241 tagttgccca caagacaacc tgcaggtagt tttatagtat gactacgaac gacaattccg
     3301 ccgccgcgcg cctgcaggcc tatgccgccc cccgcgccat ggtcgccatc gtcacgcccg
     3361 atgccgccct gcgcgagacc ttgggccaga ccctggcgcc gtcctatcgc gtttccggct
     3421 tttccgacgc ggcgaccgcc gcccgagggg ccaagccagc cgccatcctg gtcagcgaat
     3481 cgacgcgcga ggtcgaaggc gtcgacgccg tcgcctggct gcgccgccag acccggctgg
     3541 ccggtgtgcc catcgtgctg tgcgccatgc cgggccggcc ggcacgcggc accgccgggc
     3601 gccccgacgc gaccttcatc ctgcccgcca ccggccgcga cctgctggac ctggtgtcgc
     3661 gcctgggcaa caaggcggtc gaggaaagct ggacggccct gccgccaacc ccgcgcgagg
     3721 cactgaaacg gacgctcggc gtgttcaacg gcatcgccca gttgatcggc agcggctcgc
     3781 ccatggatta caaggacgtc agccacgcct gctcgcccat cctggaggtg gtgcgccagg
     3841 ccggtcatca tttcgtgttc gcgggcctac gcaaccacaa cgaccattcc tatgtgcact
     3901 cgctgcgcat gtcgacgctg ctggcgctgt tcggccacac catcggcctg gaagaggatt
     3961 cgctgatgac gctggcctcg gccgggctgg tgcacgacat cggcaagacc gtgctgccgt
     4021 ccgaggtgat ggacaagacc agcaagctgt cgccgaccga aatggaggtc gccaagagcc
     4081 acgtggacgc caccgtccgc tatctcagca accattccaa cgtcccgcgc gcggtcgtca
     4141 ccatcgccgg ccagcaccac gaacgcgtgg acggcagcgg ctatccgctg gggctgaagg
     4201 gcgagcagtt gaacgacttg t
//
LOCUS       DATIKR010000047         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_888, whole genome shotgun sequence.
ACCESSION   DATIKR010000047 DATIKR010000000
VERSION     DATIKR010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_888"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VLL76_00755"
     CDS             complement(<1..250)
                     /locus_tag="VLL76_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28044.1"
                     /translation="MIAHVLPGRIRLRHTAPVSRDELDQLGQRIREIAPSATLSNNPQ
                     SGSTLVVFAEHDRTGELLTLIRPASLHQPVRSALACRPR"
     gene            complement(247..>1693)
                     /locus_tag="VLL76_00760"
     CDS             complement(247..>1693)
                     /locus_tag="VLL76_00760"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HSV28045.1"
                     /translation="VIVRQGSFIPADGVVMNGEGLVDQSLMTGEAKLQEKRIGTAVFA
                     GSLLEEGELLIQATEDGDRTVWRRTMLLLHDAEHRKASIQGQAEQLASSLAPFSLMLA
                     VLVFAFTGDPRRAASVLMVDYSCAIKLATPLAILAAMRQATSLGAAVRGGRHLEDLAK
                     ADVFVFDKTGTLTMAAPTVKEIVACNGWNRAETLRLAACLEEHFPHPVAKAVVRQAAA
                     EGLEHDEHHAMVEYVTAHGVASCLEGSRVLLGSRHFVEEDEGVDVTPLDQHVDRWNEQ
                     GYTILYLTMGGELLAGFALDDPPRPEAAQVIGALRSMGVQRVIMLTGDLDGMAERMAR
                     EIGITEWVAQALPDDKFRYIKELKHNGHTVAMVGDGLNDAAALAEASVGCCMRRGADM
                     ARDAADIVLTQNELMALPQLRSLATATLSRVQGNFGFIVGANSLLLLGGLFGVTSPAL
                     GAFLHNAATVAVAANALRPYSLPAITSGGSR"
BASE COUNT          287 a          542 c          587 g          277 t
ORIGIN      
        1 gccgtggtcg gcacgccagc gccgacctga ccggctggtg taacgatgcc ggccggatca
       61 gcgtcagcag ctcgccggtt cgatcgtgct cggcaaagac caccagggtg ctgccggatt
      121 ggggattgtt ggacagggtg gcggaaggcg cgatctcgcg gatgcgctga ccaagttggt
      181 caagctcgtc ccgcgagacc ggggcggtgt ggcgcaggcg gatacggccg ggcagaacat
      241 gggcaatcat cgggaacctc cggaggtgat ggctggcagg gaatagggcc tgagcgcatt
      301 ggcggccacg gccacggtgg cggcgttgtg aaggaaggcg cccagagccg gcgaggtgac
      361 cccgaagagg ccgcccagca gcagcaggga attggcgccg acaatgaagc cgaaattccc
      421 ctgcacccgg gacagggtcg cggtggccag cgatctgagc tggggcaggg ccatgagttc
      481 gttctgggtg agcacgatat cggcggcatc gcgggccatg tcggcgccgc ggcgcatgca
      541 gcagcccacc gaggcctcgg ccagggcggc ggcatcgttg agtccgtcgc cgaccatggc
      601 cacggtatgg ccgttgtgct tcagttcttt gatgtagcgg aacttgtcgt cgggcagggc
      661 ctgggccacc cactcggtga tgccgatctc cctggccatg cgctcggcca tgccgtccag
      721 gtcgccggtg agcatgatca cccgctgcac gcccatgctc cgcagagcgc cgataacctg
      781 ggccgcctcg ggacggggcg gatcgtccag ggcaaatccg gccagcaact ctccgcccat
      841 ggtcagatag aggatggtgt agccctgctc gttccaacgg tcgacgtgct ggtcaagggg
      901 cgttacatcc acgccttcgt cctcctcgac gaaatggcgg ctgcccagca gcacccggct
      961 gccttcgagg caactggcga caccatgggc ggtgacgtat tcaaccatgg catgatgctc
     1021 gtcgtgctcc agtccttcgg cggcggcctg gcggaccacg gccttggcca ccggatgggg
     1081 aaaatgctct tccaggcagg ctgccaggcg gagcgtttcc gcccggttcc agccgttgca
     1141 ggcgacgatc tccttgacgg tcggtgcggc catggtcagg gtgccggtct tgtcgaagac
     1201 aaagacatcg gccttggcca gatcctcgag atggcggccg ccgcgcaccg ccgcccccag
     1261 cgaggtcgcc tggcgcatgg cggccaggat ggccagggga gtggccagtt tgatggcgca
     1321 ggagtagtcg accatcagca ccgaggcagc ccggcgggga tcgccggtga atgcaaacac
     1381 caacaccgcc agcatcaggg aaaagggggc caggctgctg gccagctgtt ccgcctgtcc
     1441 ctggatagag gccttgcgat gttcggcgtc atgcaagagc agcatggtcc ggcgccagac
     1501 cgtgcggtcg ccatcctcgg tggcctggat gagcaactcc ccctcttcga gcagcgagcc
     1561 ggcgaacacc gccgtgccga tccgcttttc ctgcagtttg gcctcgccgg tcatcaggct
     1621 ctggtccacc aatccttccc cgttcatgac cacgccatcg gccgggatga aactgccctg
     1681 gcggacaatc acc
//
LOCUS       DATIKR010000048         1877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_121785, whole genome shotgun sequence.
ACCESSION   DATIKR010000048 DATIKR010000000
VERSION     DATIKR010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121785"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..912
                     /locus_tag="VLL76_00765"
     CDS             <1..912
                     /locus_tag="VLL76_00765"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding protein"
                     /protein_id="HSV28046.1"
                     /translation="SVFTLPADGCRDDARRFVERYDGLLWDAAANEGGSCSKHVLHGG
                     PTPHQSLKHLVPWMAGRAGERFVVAGGTDVLGRELARVARSTLARIGIKPVGVATDVD
                     GAVRLAAQADVVLSTRSGAAAVELMRAHRAAGIKAIIASPTLGEIEVAAAGRDAIGHV
                     AAQPYFASWISPANWRFLDRMRRRHGARVTPSASAEAIWTQIALFGTALSHLSDTDVH
                     PLNIREAVKGVRVEAPQGLVELEAESLHARLWPKIAVVEPSGRLGIVARARQAVRPLP
                     YWAHANRACTDDGAVTARNNVLARDSE"
     gene            1032..1340
                     /locus_tag="VLL76_00770"
     CDS             1032..1340
                     /locus_tag="VLL76_00770"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV28047.1"
                     /translation="MSRTLSRRALFGRPPGEDAAAPARRVAELAAPCLAVNGTMCGVC
                     ADPCEPRALRVRPLLGGRALPIIDVAACTGCGDCLTVCPVGALALVPAAAASEEAQCA
                     "
     gene            1331..1639
                     /locus_tag="VLL76_00775"
     CDS             1331..1639
                     /locus_tag="VLL76_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HSV28048.1"
                     /translation="MRVNTFVAKEKERPHDVVENVCGVLVHARPAELDHVRVGLGELP
                     GVEIHQVTDDGRLIVTVEDAEGQWAGATISRFNDIRGVLSVALVYHHFDSDLEGEIRS
                     "
     gene            1636..>1877
                     /locus_tag="VLL76_00780"
     CDS             1636..>1877
                     /locus_tag="VLL76_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015461179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSV28049.1"
                     /translation="MSLTRRDFIKANAVAATAAAAGIAVPAMAQPKNNIRWDKGVCRF
                     CGTGCGVLVGVQDGRVVATQGDPDAPVNRGLNCIKG"
BASE COUNT          266 a          679 c          637 g          295 t
ORIGIN      
        1 agcgtcttca ccctgccggc cgacggctgc cgcgacgatg cccgccgctt cgtcgagcgc
       61 tatgacgggc tgttgtggga tgccgccgca aacgagggcg gctcgtgttc caagcacgtg
      121 ctgcacggcg gcccgacgcc gcaccagagc ctcaagcatc tggtgccgtg gatggccggc
      181 cgcgccggcg agcgcttcgt ggtggccggc ggaaccgacg tcctgggccg ggaattggcg
      241 cgcgtcgctc gttccacctt ggcccgcatc ggcatcaagc cggtgggggt ggcaaccgac
      301 gttgacggtg ccgtccggct ggcggcccag gccgacgtgg tgctgtccac ccgttcgggc
      361 gcggcggcgg tggagttgat gcgcgcccat cgcgccgccg gcatcaaggc gatcatcgcc
      421 agtccgaccc tcggcgagat cgaggtcgcc gccgccggcc gcgacgcgat cggccatgtg
      481 gcggcgcagc cctatttcgc cagttggatc tcgcccgcca actggcgctt cctcgaccgc
      541 atgcgccgcc gccatggcgc ccgcgtcacg ccctcggcat cggccgaggc catatggacc
      601 cagatcgccc tgttcggcac ggcgctgtcg catttgtccg acaccgacgt ccacccgctg
      661 aacatccgcg aagcggtcaa gggcgtgcgg gtcgaggcgc cccagggtct ggtcgagctt
      721 gaggccgaaa gcctgcatgc ccgcctgtgg cccaagatcg ccgtggtcga gccgtcgggc
      781 cgcctcggca tcgtcgcccg cgcccgccag gcggtgcggc cgctgcccta ttgggcccat
      841 gccaaccgcg cctgcaccga cgacggtgcg gtcacggcgc ggaacaatgt cctagcgcgg
      901 gactcggaat aaccttatcc cttgcgtggt tatgttgatc aaagtcaagt gaccccaccg
      961 ggaagggtgt cactgtgccc ctcacgaggt tggccgaatg ggtcggtcgc ataccccgag
     1021 agaggcattc aatgtcccgg actctctccc gtcgcgccct gttcgggcgt ccacccggcg
     1081 aagacgccgc cgccccggcg cggcgggtcg ccgaactggc cgctccctgc ctcgccgtca
     1141 acggaaccat gtgcggtgtc tgcgccgacc cgtgcgagcc gcgagccctg cgcgtgcggc
     1201 cgctgctggg cggccgtgcc cttcccatca tcgacgtcgc cgcctgcacc ggctgcggcg
     1261 actgcctgac cgtctgtccc gtgggggcgc tggcgctggt gcctgccgcc gccgcatcgg
     1321 aggaagccca atgcgcgtga ataccttcgt cgccaaggaa aaggagcggc cccacgacgt
     1381 ggtcgagaat gtgtgcggtg tcctggtcca cgcccggccc gccgaactcg accatgtgcg
     1441 cgttgggctg ggcgagcttc ccggcgtcga aatccatcag gtcaccgacg acggccgcct
     1501 gatcgtcacc gtggaggacg ccgagggcca gtgggccggc gccaccatca gccgtttcaa
     1561 cgacatccgg ggcgtcctgt cggtcgccct ggtctaccac cacttcgatt ctgatctgga
     1621 aggggagatc cgttcatgag cctcaccagg cgcgacttca tcaaggcgaa cgccgtcgca
     1681 gccaccgccg cggccgccgg tattgctgtg cccgcaatgg cccagcccaa gaacaacatc
     1741 cgctgggaca agggcgtctg ccgcttctgc ggcaccggct gcggcgtgct ggtgggcgtc
     1801 caggacggcc gcgtggtcgc cacccaaggc gatcccgacg cgccggtcaa ccggggcctg
     1861 aactgcatca agggcta
//
LOCUS       DATIKR010000049         2866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_206447, whole genome shotgun sequence.
ACCESSION   DATIKR010000049 DATIKR010000000
VERSION     DATIKR010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206447"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..391
                     /gene="flgC"
                     /locus_tag="VLL76_00785"
     CDS             8..391
                     /gene="flgC"
                     /locus_tag="VLL76_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HSV28050.1"
                     /translation="MALSGMKAQTQRLRVISENLANADSLAQTPEGKPYQRKVVSFKD
                     ELDRANGVTRVKVDKVRNDQSEFQRRFDPNHPAADRDGYVLAPNVNPLIEMMDMREAQ
                     RSYEANLQVISSSRNMLSRTVEMLR"
     gene            537..845
                     /locus_tag="VLL76_00790"
     CDS             537..845
                     /locus_tag="VLL76_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HSV28051.1"
                     /translation="MTTINNALAAYAAAAKPLDDPADKSPAVMPGTDFASVLKDAAKV
                     AVGTMKEAETTSAAAIAGKADIREVVAAISNAEATLETVVSVRDKVINAYNEIMRMPI
                     "
     gene            862..1140
                     /gene="fliQ"
                     /locus_tag="VLL76_00795"
     CDS             862..1140
                     /gene="fliQ"
                     /locus_tag="VLL76_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HSV28052.1"
                     /translation="MTEAELIDIARESIWTMIIVGAPPLLTGLVVGLAISILQTITQI
                     QEMTLTFVPKVLLVFGSIVLFLPFMLGTMGDFWKMVMDRVVSGAAGGG"
     gene            1147..1911
                     /gene="fliR"
                     /locus_tag="VLL76_00800"
     CDS             1147..1911
                     /gene="fliR"
                     /locus_tag="VLL76_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HSV28053.1"
                     /translation="MLNEILSTDIYRFFLLFTRLGAAMMFMPGFGGQRVPVRFQLLFA
                     LALAFLLLPVLGTQIPPLPRRVGDLVVLMMGEALIGIFMGMVLQTIMMALHVAGTFIG
                     FQTGLTNAFSFDFVAEQQSSLLTSFLANLALVAVFATDMHHVMLRAIVDTYAVFPPGQ
                     PVPVGEFSEMLSKMASASFNLGIKLAAPLMAFGLIFYAGLGLLSRMVPQMQVFFVALP
                     VQVIAGLWMLMVGLPVMMLVFLRNMDETLAPFLVPR"
     gene            1915..>2866
                     /locus_tag="VLL76_00805"
     CDS             1915..>2866
                     /locus_tag="VLL76_00805"
                     /inference="COORDINATES: protein motif:HMM:NF013479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
                     /protein_id="HSV28054.1"
                     /translation="MAEDSSSEDKTEEPSDKKLSHAREEGNVAQSMEARIFATMVAGL
                     ILIGILVPGMIQDLGQVMLPLVERPHSFEVDFNGLRMLLLTLGGKVLLIMAWPMIVVI
                     IAALAVSLAQTQGLMWVPKKVMPDFSKISPLQGLQRLFGAQAVVEFLKSMAKVLIIGT
                     VLGAAIAPHFGEMANLVNLEITDTMAYIHDQVYGLVLITLILVAALAVGDFLFQKWRF
                     TEKMKMTRQEVKDENKQQEGDPQVKAKIRSLRVRRARQRMMAAVPGADVVITNPTHFA
                     VALKYDMEAMSAPVLVAKGADHVAARIREVATDNEVPIVEN"
BASE COUNT          515 a          918 c          915 g          518 t
ORIGIN      
        1 acagcagatc gcgctgtcgg gcatgaaggc ccagacccag cgcctgcgcg tcatctcgga
       61 gaacctggcc aacgccgatt cgctggcgca gacgcccgag ggcaagccct atcagcgcaa
      121 ggtcgtcagc ttcaaggacg agctggaccg cgccaacggc gtcacccgcg tcaaggtcga
      181 caaggtgcgc aacgaccagt ccgagttcca gcgccgcttc gaccccaacc acccggccgc
      241 cgaccgcgac ggctatgtgc tggcacccaa cgtcaatccg ctgatcgaga tgatggacat
      301 gcgcgaggca cagcgcagct atgaagccaa tcttcaggtg atcagctcgt cacgaaacat
      361 gttgtcgcgt accgtagaga tgctgcgcta gtggtcctcc ccagacgctt gggacccaag
      421 cgtctggata aggaggccca ccaacatatt gaattgtggt gagaatccga cggagggtgt
      481 cgggcaccat ccgtcagatt ctcaccacta gggcgctttg aagggaacgg ccggtcatga
      541 ccacaatcaa caacgctctc gccgcctacg ccgccgccgc caagccgctg gacgatccgg
      601 cggacaagtc gccggcggtg atgccgggca ccgacttcgc cagcgtgctg aaggacgccg
      661 ccaaggtggc ggtcggcacc atgaaggagg ccgagaccac ctctgccgcc gccatcgccg
      721 gcaaggccga catccgcgag gtggtggccg ccatctcgaa cgccgaggcc accctggaaa
      781 ccgtggtcag cgtgcgcgac aaggtgatca acgcctacaa cgaaatcatg cgcatgccca
      841 tctgagggcg gcgccgcggt catgaccgaa gccgagctga tcgacatcgc gcgcgagtcc
      901 atctggacga tgatcatcgt cggcgcgccg ccgctgctga ccgggctggt ggtcggcctg
      961 gcgatctcga tcctgcagac catcacccag atccaggaaa tgaccctgac cttcgtgccg
     1021 aaggtcctct tggtgttcgg gtcgatcgtg ctgttcctgc cgttcatgct cgggaccatg
     1081 ggcgacttct ggaaaatggt gatggaccgc gtcgtctcgg gcgcggccgg cggcggataa
     1141 acccgcgtgc tgaacgagat cctgtccacc gacatctatc gcttcttcct gctgttcacc
     1201 cgcctgggcg cggccatgat gttcatgccc ggcttcggcg gccagcgcgt gcccgtccgc
     1261 ttccagttgc tgttcgccct ggccctggcc ttcctgctgc tgccggtgct ggggacgcag
     1321 atcccgcctt tgccccgccg cgtcggcgac ctggtggtgc tgatgatggg cgaggcgctg
     1381 atcggcatct tcatgggcat ggtgctgcag accatcatga tggcgctgca cgtggccggc
     1441 accttcatcg gctttcagac cggcctgacc aacgcctttt cgttcgactt cgtggccgag
     1501 cagcaaagct cgctgctgac cagcttcctg gccaacctgg ctttggtggc ggtgttcgcg
     1561 accgacatgc atcacgtgat gctgcgcgcc atcgtcgaca cctatgccgt cttcccgccg
     1621 ggccagccgg tgccggtggg cgagttctcg gagatgctgt cgaagatggc ctcggccagc
     1681 ttcaacctgg gcatcaagct ggcggcgccg ttgatggcgt tcggcctgat cttctatgcc
     1741 gggctgggtc tgctgtcgcg catggtgccg cagatgcagg tgttcttcgt ggcgctgccg
     1801 gtccaggtga tcgccggcct gtggatgctg atggtggggt tgccggtcat gatgctggtg
     1861 ttcctgcgga acatggacga aactttggct cccttcctgg tccccaggtg agcgatggcc
     1921 gaagattcgt cgtccgaaga caaaacagaa gagccatcag acaaaaagct cagccatgcg
     1981 cgcgaggaag gcaacgtcgc gcaatccatg gaggcgagga tcttcgccac catggtggcc
     2041 ggactgatcc tgatcggcat cctggtgccc ggcatgatcc aggatttggg ccaggtcatg
     2101 ctgccgctgg tcgagcgccc ccattccttc gaagtggact tcaacggcct gcgcatgctg
     2161 ctgctgactt tgggcggcaa ggtcctgctg atcatggcct ggcccatgat cgtggtgatc
     2221 atcgcggcgc tggcggtgtc gctggcgcag acccagggcc tgatgtgggt gcccaagaag
     2281 gtcatgcccg atttcagcaa gatcagcccg ttgcagggat tgcagcgcct gttcggggcg
     2341 caggcggtgg tcgaattcct gaaatccatg gccaaggtgc tgatcatcgg caccgtcctg
     2401 ggcgccgcca tcgcccccca tttcggtgaa atggcgaatc tggtgaatct cgagatcacc
     2461 gacaccatgg cctatatcca cgaccaggtg tacggcctgg tgctgatcac gctgatcctg
     2521 gtagcggccc tggcggtggg cgacttcctg ttccagaaat ggcgcttcac cgagaagatg
     2581 aaaatgaccc gccaggaggt caaggacgag aacaagcagc aggaaggcga cccccaggtc
     2641 aaggccaaga tccgcagcct gcgcgtccgc cgcgcccgcc agcgcatgat ggcggcggtg
     2701 cccggggccg acgtggtcat caccaacccg acccacttcg cggtggcgct gaaatacgac
     2761 atggaggcca tgagcgcgcc ggtgctggtg gccaagggcg ccgaccacgt cgccgccagg
     2821 atccgcgagg tcgccaccga caacgaagtg ccgatcgtcg agaacc
//
LOCUS       DATIKR010000050         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_206466, whole genome shotgun sequence.
ACCESSION   DATIKR010000050 DATIKR010000000
VERSION     DATIKR010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206466"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VLL76_00810"
     CDS             complement(<1..786)
                     /locus_tag="VLL76_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSV28055.1"
                     /translation="MRTATYASAATALTLIVVKLAAWAMTGSVAILSTLIDSALDAAA
                     SLINLWAVSHALTPADRDHRFGHGKAEPLAGLGQAAFIVGSGALLLVEAVDRFFHPTM
                     VQKGEIGIGVMAFSILLTAILVRYQKYVVAKTQSVAISADSLHYVGDVLINGSVIVSL
                     ALTMFLGWTFLDPVFAIAIAGYLMWNAWQIATNSLDMLMDKELPEADRDRIRIIARSH
                     PDVRNMHDLRTRLSGQQGFIQLHLELDANLPLYKAHDIADEVEK"
     gene            complement(837..1424)
                     /gene="pdxH"
                     /locus_tag="VLL76_00815"
     CDS             complement(837..1424)
                     /gene="pdxH"
                     /locus_tag="VLL76_00815"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043743428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HSV28056.1"
                     /translation="MSAAEADPFSLFAKWMADAEQSEPNDPNAMAVASADRQGRPSVR
                     MVLLKGWDRDGFVFYTNLQSRKGSDLVENPYASLLFHWKSLKRQVRVEGPVTMVSDAE
                     ADEYFASRARTSQIGAWASDQSRPLAGRFELERRVAEYTAKFGLSAVPRPPHWSGFRI
                     AAERMEFWQDRPFRLHDRFAYHRDGDTWSLDHLFP"
BASE COUNT          281 a          520 c          566 g          281 t
ORIGIN      
        1 cttctcgacc tcgtcggcga tgtcgtgggc cttgtacagc ggcaggttgg cgtccagttc
       61 caggtgcagc tggatgaagc cctgctggcc cgacagccgg gtgcgcagat cgtgcatgtt
      121 gcgcacgtcg gggtgcgagc gggcgatgat gcggatgcgg tcgcggtctg cctcgggcag
      181 ttccttgtcc atcagcatgt ccagcgaatt ggtcgcgatc tgccaggcgt tccacatcag
      241 atagccggcg atggcgatgg cgaagaccgg gtccaggaag gtccagccca ggaacatggt
      301 cagcgccagc gacacgatga cgctgccgtt gatcagcacg tcgccgacat agtgcagtga
      361 atccgccgag atggcgaccg actgggtctt ggcgaccacg tatttctgat agcgcaccag
      421 gatggcggtg agcaggatcg agaacgccat cacgccgatg ccgatctcgc ccttctgcac
      481 catggtcggg tggaagaagc ggtcgaccgc ctcgaccagc agcaacgcgc cagagccgac
      541 gatgaatgcc gcctggccca ggccggccag cggctcggcc ttgccgtggc cgaagcggtg
      601 gtcgcggtcg gccggggtca gggcatggct gacggcccac aggttgatca gcgaggcggc
      661 ggcatccagc gccgaatcga tcagcgtcga caggatggcg accgagccgg tcatggccca
      721 ggcggccagc ttgaccacga tcagcgtcag cgcggtggcg gccgacgcat aggtggccgt
      781 gcgcatcagc ctgccggtgt cggtctctgc gggtcgaact gcttccatgg cccccgtcac
      841 gggaaaagat ggtccagcga ccaagtgtcg ccatcgcgat ggtacgcgaa gcggtcatgc
      901 aaccggaagg gccgatcctg ccagaattcc atgcgctcgg cggcgatgcg gaagcccgac
      961 caatgcggcg ggcgcggcac cgccgacagg ccgaacttgg cggtgtattc ggcgacgcgg
     1021 cgttccagct cgaagcggcc ggccagcggg cgggattggt ccgaggccca ggcgccgatc
     1081 tggctggtgc gggcgcggct ggcgaaatat tcgtcggcct cggcgtcgct gaccatggtc
     1141 accgggcctt cgacgcgcac ctgccgcttc aggctcttcc agtggaacag cagcgaggcg
     1201 tagggattct cgaccaggtc gctgcccttg cggctttgca ggttggtgta gaacacgaag
     1261 ccgtcgcggt cccagccctt cagcagcacc atgcgcacgc tggggcggcc ctgacgatcg
     1321 gcgctggcga ccgccatggc gttggggtcg ttgggctcgc tctgctcggc gtccgccatc
     1381 catttggcga acaacgaaaa cggatcggct tcggcggcgg acatgacgcg ctccggtatg
     1441 atggacgttc gttctagctt gccaggacgc cccgaaaaag ccccaattcc atcttattgg
     1501 ttaactaccc cacatgcgtt gggaacatga cggacgagac gaccatgact tctttcgcac
     1561 gcaaggctgt tccgctgctg atcgtcgccg cccttgcggc cggctgctcc aacgattacg
     1621 gccccaagca gaccggtggc gcggtgct
//
LOCUS       DATIKR010000051         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_25029, whole genome shotgun sequence.
ACCESSION   DATIKR010000051 DATIKR010000000
VERSION     DATIKR010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25029"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /locus_tag="VLL76_00820"
     CDS             <1..699
                     /locus_tag="VLL76_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017310770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV28057.1"
                     /translation="GRAVAIGFAKEGADVAVCYLNEHDDAKETKRLVEAAGRRCLLIA
                     GDVGDEGFCRKVVDDTVGEFGRLDVVVNNAAEQHPQQSLTDITADQLEKTFRTNIFSM
                     FFLTKAALPHLKPGASIVNTTSITAYKGNPGLLDYSATKGAIVAFTRSLAMNLSDKGI
                     RVNGVAPGPIWTPLIPSTFSEEHVESFGTNQPMGRVGQPDEVAPSFIFLASADASYIS
                     GQVLHPNGGEVVNG"
     gene            complement(696..1208)
                     /locus_tag="VLL76_00825"
     CDS             complement(696..1208)
                     /locus_tag="VLL76_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSV28058.1"
                     /translation="MATVLISIFCPDRTGLVAAITGRLFEIGANLGDTGFSMLGSGAD
                     FTSVCEIPADTTPEEVQADLAALPGLERAQVAVRPFELDSEHGPAGRVTHRIVVSGGD
                     RPGLVARLSEVFGEFGANIVRMDAQRFPEQNLYATRFAVAITDRVDACLNTIANTAGE
                     LNLSCHVEEA"
     gene            1334..>1617
                     /locus_tag="VLL76_00830"
     CDS             1334..>1617
                     /locus_tag="VLL76_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HSV28059.1"
                     /translation="MRHLILPALLLAFATPAQAGIDEIRLGLLDHDVGVFGGEHESGY
                     DVNGEVLFESPGFLAPIWAPRPHVGVYVNTTGDTSQAYAGLTWTWDATDWL"
BASE COUNT          278 a          542 c          537 g          260 t
ORIGIN      
        1 ggccgcgccg tcgccatcgg cttcgccaag gaaggcgccg acgtggcggt gtgctatctc
       61 aacgaacacg acgatgccaa ggaaaccaag cggctggtgg aagcggccgg ccgccgctgc
      121 ctgctgatcg ccggcgacgt cggcgacgag ggattctgcc gcaaggtggt ggacgacacg
      181 gtgggggaat tcggccgcct cgacgtggtc gtcaacaacg ccgccgagca gcatccccag
      241 caaagcctga ctgacatcac cgccgatcaa ttggaaaaaa cgtttcgcac caacatcttc
      301 tcgatgtttt ttctcactaa ggctgcgttg ccgcacttga agccgggcgc ctcgatcgtc
      361 aacaccacgt cgatcaccgc ctacaagggc aatcccggcc tgctcgacta ttccgccacc
      421 aagggcgcca tcgtcgcctt cacgcgctcg ctggccatga acctgtcgga caagggcatc
      481 cgggtgaacg gcgtcgcgcc ggggccgatc tggacgccgc tgatcccgtc gaccttctcg
      541 gaagaacacg tcgaaagctt cggcaccaac cagcccatgg ggcgtgtcgg ccaacccgac
      601 gaagtggccc ccagcttcat ctttctcgcc agcgccgacg cgtcctacat ctcggggcag
      661 gtgctgcacc ccaacggcgg cgaggtggtg aacggttagg cctcttccac gtggcagctc
      721 aggttcagct cgccggccgt gttggcgatg gtgttgaggc acgcatcgac ccggtcggtg
      781 atggcgacgg cgaagcgggt ggcatagagg ttctgttcgg ggaagcgctg cgcgtccatg
      841 cgcacgatat tggcaccgaa ctcgccgaac acctcggaca ggcgggcgac caggccgggg
      901 cgatcgccgc ccgaaaccac gatgcggtgg gtgacgcggc cggcggggcc gtgttccgaa
      961 tccagctcga atggacgcac ggcgacctgg gcgcgttcca ggccgggcag ggcggcgagg
     1021 tcggcctgga cctcctcggg cgtggtgtcg gcggggattt cgcacaccga ggtgaagtcg
     1081 gcgccgctgc ccagcatgga aaagccggtg tcgcccagat tggcgccgat ctcaaacagg
     1141 cggccggtga tggccgcgac caggccggtg cggtcggggc aaaagatcga aatcagcacg
     1201 gtggccatgt gttcctccca atccaggcgg cccatgatgc gccacaatcg gccgtttgca
     1261 agcccgccgt tcgggtagtc ggggggcttt cggcagggtt tgagcggccg tcgcgatgcc
     1321 cagatgctgg cccatgcgac acctcatcct tcccgccctg ctgctggcct tcgccacccc
     1381 ggcccaggcc ggcatcgacg agatccggct cggattgctc gaccacgacg tcggcgtgtt
     1441 cggcggcgag cacgaaagcg gctacgacgt caacggcgag gtgctgttcg agtcgcccgg
     1501 cttccttgcc cccatctggg cgccccggcc gcatgtgggc gtctatgtca acaccaccgg
     1561 cgacaccagc caagcctatg ccggcctgac ctggacgtgg gacgccaccg actggct
//
LOCUS       DATIKR010000052         4712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_146259, whole genome shotgun sequence.
ACCESSION   DATIKR010000052 DATIKR010000000
VERSION     DATIKR010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146259"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VLL76_00835"
     CDS             <1..410
                     /locus_tag="VLL76_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HSV28060.1"
                     /translation="DGRHHDLLYVDGGPSTTQTVGHVRMEGREVFRHAVTNLATVVDE
                     ALTANGLAANDIDWVVPHQANRRILDGTARKLGLDPARMVVTVDRHANTSAASVPLAF
                     TEAWTDGRIKRGDLCLLEAMGGGFTWGAALVRI"
     gene            543..857
                     /locus_tag="VLL76_00840"
     CDS             543..857
                     /locus_tag="VLL76_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HSV28061.1"
                     /translation="MSEKTITRAQLSEAVYQEVGLSRNESADLLEAVLDEVSDALSRG
                     ETVKISSFGSFSVRAKGQRVGRNPKTGEEVPILPRRVLVFRPSQLLKKKINDGPLAKA
                     GK"
     gene            857..1420
                     /locus_tag="VLL76_00845"
     CDS             857..1420
                     /locus_tag="VLL76_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSV28062.1"
                     /translation="MSAEEGELPLVRRAGKSEAAFRTISEVAEDLDVPQHVLRFWESK
                     FPQVKPLKRGGGRRYYRPEDVALLKRIRDLLYSEGYTIKGVQKLLREGGHKEGAAAGK
                     PDELRLDLGHEDEDDDLPAMDDGEEDGAEDIEDGDEPVDVEPEPDHAVAAILTAPQAA
                     SLAPETRAELEAILGELEQLRSLLQPR"
     gene            1495..1571
                     /locus_tag="VLL76_00850"
     tRNA            1495..1571
                     /locus_tag="VLL76_00850"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1529..1531,aa:Pro,seq:ggg)
     gene            1699..1908
                     /locus_tag="VLL76_00855"
     CDS             1699..1908
                     /locus_tag="VLL76_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017287329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HSV28063.1"
                     /translation="MPRIEFEHLSPRERLELIEALWESLEGAEIPPTPAQIEELDRRI
                     ATADADLSESSSWETMRAEAANRYR"
     gene            1908..2204
                     /locus_tag="VLL76_00860"
     CDS             1908..2204
                     /locus_tag="VLL76_00860"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HSV28064.1"
                     /translation="MPPVVFTAAARAEMFEAADWYESHGPGLGARFVADMDVLVARLR
                     ERPQQFPRIRQEIRRALFRKFPYALYFRINPDLVQVIACFHASRDPRRWHERAS"
     gene            2201..3274
                     /locus_tag="VLL76_00865"
     CDS             2201..3274
                     /locus_tag="VLL76_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28065.1"
                     /translation="MTSSPHLWVALSPHGYGHAAMTAPLVAELRRRRPELRLTIQTAL
                     PREFLATRYGEFEQVTDIPDFGFRMRSATDIDLEASADGYAAMHVGFDGLVAREAERL
                     RRAAPDLVLANVPYVTVAAAALVGIPVAAFSSLNWADMYAHYLGHRPEAPLILGQMRE
                     SYAKAAMFLRCTPAQTMTLPNLRDIGVVARRGAARRDELAQTVGTPRIGLIAFGGIDH
                     SLPLEKWPVMEGWTWLSTLADTPERADILTWQSVGMPFADLIPSVDVIVTKPGYGTFT
                     EAGLAGTPVLCVPRPDWPECPHLDNWLAAHVPVLPVSVEELLADLPLLLQRLFSLPRP
                     QVAEALGVVEGADALEALLGPSE"
     gene            3550..3873
                     /gene="cutA"
                     /locus_tag="VLL76_00870"
     CDS             3550..3873
                     /gene="cutA"
                     /locus_tag="VLL76_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011985494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HSV28066.1"
                     /translation="MTDTSLIYVTAPSREEALKLARAVVEERLAACGNVLGAIESVYW
                     WDGKLNQEPEVALILKTRADLVEALTARVRELHPYECPCVVALPIAAGNPAFLAWIAA
                     ETKPL"
     gene            complement(3870..>4712)
                     /gene="ispF"
                     /locus_tag="VLL76_00875"
     CDS             complement(3870..>4712)
                     /gene="ispF"
                     /locus_tag="VLL76_00875"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HSV28067.1"
                     /translation="DGARPFIDAGTIGRVIAACADAPGAIAAIPVADTLKRGADGRIA
                     DTVDRTALWRAQTPQGFRFADILAAHKAAAGQELTDDAAVAEKAGLAVALVMGDEDNF
                     KITTAADLARAHRPFEGAGEVRTGSGFDVHRFAPGTGVWLCGVQVPHDEALEGHSDAD
                     VALHALTDAILGAIAAGDIGRHFPPTDPQWKGAASHLFLAHAAGLVRALGGRIVNVDV
                     TIVCERPKVGPHRGAMQARVAEILGVRQDRVSIKATTTEGLGFTGRREGIAAQATANV
                     WLPR"
BASE COUNT          727 a         1609 c         1593 g          783 t
ORIGIN      
        1 ccgacggccg tcaccacgac ctgctgtacg tggacggcgg cccgtccacc acccagaccg
       61 tcggccatgt ccgcatggag ggccgcgagg tgttccgcca cgccgtcacc aaccttgcca
      121 ccgtggtgga cgaggcgctg accgccaacg gccttgccgc caacgacatc gactgggtgg
      181 tgccgcacca ggccaaccgc cgcatcctcg acggcaccgc caggaagctg ggcctcgacc
      241 cggcccgcat ggtcgtcacc gtcgatcgcc acgccaacac ctcggccgcg tcggtgccgc
      301 tggccttcac cgaggcctgg accgacggcc gcatcaagcg cggcgacctg tgcctgctcg
      361 aggccatggg cggcggcttc acctggggcg cggcgctggt gcgcatctga catcgggttg
      421 tcacccgatc ttgcgcaccc ttcgcaacgt ctacctgcat ccctttgata ttgacggctt
      481 tccgcgaacc cggtacggtt cgcccatact cattcccgaa cgcaacgatt gggcctggcc
      541 gcatgtccga gaagaccatc acccgcgcgc aattgagcga ggccgtctac caggaagtcg
      601 ggctgtcccg taacgaatcc gccgacttgc tggaagccgt gctggacgag gtgtcggacg
      661 cgctgtcgcg cggcgagacc gtcaaaatct cgtcgttcgg cagcttctcg gtgcgcgcca
      721 agggccagcg cgtcggccgc aaccccaaga ccggcgagga ggttcccatc ctgccgcgcc
      781 gggtgctggt gttccgtccg tcgcaattgc tgaagaagaa gatcaacgac ggcccgctgg
      841 ccaaggccgg gaagtgatga gcgcggaaga aggcgaactg ccgctggtcc gccgcgccgg
      901 caagtccgag gcggccttcc gcaccatcag cgaggtggcg gaagacctgg acgtgccgca
      961 gcacgtgctg cgcttctggg aaagcaagtt cccccaggtc aagccgctga agcgcggcgg
     1021 cggccgccgc tattaccgcc ccgaggacgt ggcgctgctc aagcgcatcc gcgacctgct
     1081 gtattccgag ggctacacca tcaagggcgt gcagaagctg ctgcgcgaag gcggccacaa
     1141 ggaaggcgcc gccgccggca agcccgacga actgcgcctg gacctcggcc acgaggacga
     1201 ggacgacgac ctgcccgcca tggacgacgg cgaggaagac ggcgccgagg acatcgagga
     1261 cggcgacgag ccggtggacg tcgaacccga gcccgaccat gccgtcgccg cgatcctgac
     1321 ggcaccgcag gccgcttcgc tggcgccgga gacgcgcgcc gagctggagg ccatcctggg
     1381 tgaactggag caacttaggt cccttcttca accccgctga ttaggggttg cggggcaggg
     1441 gcctcctgag tatagtgcgc ccctcttccg gcggaccccg ccggattgaa cggtcggagc
     1501 gtagcgcagc ccggtagcgc atcagtctgg gggactgggg gtcgcaggtt cgaatcctgt
     1561 cgctccgacc attataaggc cctgaaaccg aaaggtttcg gggcctttcc aattggggcg
     1621 cgtcctgtcc tcgacgcctt cccatcgcca tcccttactg tgttataatc cgcggcgtct
     1681 agaccaggaa cgcgcgacat gccccgtatc gaattcgagc atctttcacc gcgcgagcgg
     1741 ctcgaactga tcgaagccct ttgggaaagc ctagaggggg cggagattcc gcccacgccg
     1801 gctcagatcg aagagcttga ccgacgcatc gcgacggcgg atgccgattt atccgagtct
     1861 tcgtcttggg agacgatgcg ggccgaagct gccaatcgct accgctaatg ccgccagtcg
     1921 tctttacggc cgccgcccgc gccgagatgt ttgaagccgc tgactggtat gaatcgcacg
     1981 gcccagggtt gggcgcgcgc tttgttgccg atatggatgt gctggtggct cggcttcggg
     2041 aacgacccca gcaattcccc cgtattcgtc aggaaatccg ccgggcattg ttccggaaat
     2101 tcccctacgc gctttacttc cgcattaacc cggacctagt tcaggttatc gcctgtttcc
     2161 atgcaagccg agacccccgc cgttggcacg agcgggcgtc atgacatcct ccccccatct
     2221 ctgggtcgcc ctgtcccccc acggctacgg ccatgccgcc atgaccgcgc cgctggtggc
     2281 ggagttgcgg cggcggcggc ccgaattgcg gctgaccatt cagacggcgc tgccgcgcga
     2341 gttcctggcc acccgctatg gcgagttcga gcaggtcacc gatatccccg atttcggctt
     2401 ccgcatgcgc tcggccaccg acatcgacct ggaggccagc gccgacggct atgccgccat
     2461 gcatgtgggc ttcgacgggc tggtggcgcg cgaggcggag cggctgcggc gggcggcgcc
     2521 cgacctggtg ctggccaacg tgccctatgt caccgtcgcg gcggcggcct tggtcggcat
     2581 tccggtggcg gcgttctcgt cgctgaactg ggccgacatg tatgcccatt acctcggcca
     2641 tcggcccgaa gcgccgctga tcctggggca gatgcgcgag tcctatgcca aggcggccat
     2701 gttcctgcgc tgcaccccgg cgcagaccat gaccctgccc aatctgcgcg acatcggcgt
     2761 ggtggcgcgg cgcggtgctg cccggcgcga cgaactggcg cagaccgtcg gaacaccccg
     2821 aatcggcctg atcgccttcg gcggcatcga ccattcgttg ccgttggaga aatggccggt
     2881 gatggaggga tggacgtggc tgtcaaccct ggctgacacc ccggagcgcg ccgatatcct
     2941 gacctggcaa tccgtgggga tgccgtttgc cgacctgatt ccgtcggtgg acgtgatcgt
     3001 caccaagccc ggctacggca ccttcaccga ggccgggctg gccggcacgc cggttctgtg
     3061 cgtcccgcgc cccgattggc cggaatgccc ccatctcgat aattggctgg ccgcccatgt
     3121 gccggtgctg ccggtgtcgg tcgaggagct gttggcggac ctgccgctgc tactgcaaag
     3181 gttgttttcc ctgccgaggc cgcaggttgc cgaggctttg ggggtggtcg agggggccga
     3241 cgcgctggag gccttgctcg ggccatcgga gtagcctgcg aacgcagttg atgctgcccg
     3301 gatttgtcac gcggcagcat cgaaatcccg catcgcaatc gtgacgcctg cgccccatgt
     3361 gctctatgcg gtttcagccc ttttgcggat gcgaccgcgc atggcggcct ctgctccgtc
     3421 tcctctccag aggcgagcct tcgctcactt tggggcggat tcttcccttc cctccggaat
     3481 ggaagtccgc ccccctttct tgaccgaaag gccagggaag gccaggattt ccgcgaagga
     3541 ggacccgcca tgaccgacac cagcctgatc tacgtcaccg ccccaagtcg ggaagaagcc
     3601 ctgaagctgg cccgcgccgt ggtcgaggaa cggcttgccg cctgcggcaa cgtactgggc
     3661 gccatcgagt cggtgtattg gtgggacggc aagctcaacc aggagccgga agtggcgctg
     3721 atcctcaaga cccgcgccga tctggtcgag gccctgactg cgcgggtgag ggagctgcat
     3781 ccctacgaat gcccttgcgt ggtggcgctg cccatcgccg ccggcaatcc ggcgttcctg
     3841 gcgtggattg cggcggagac caagccgctt tagcgcggca gccacacatt ggcggtcgcc
     3901 tgggcggcga tgccctcgcg ccggccggtg aagcccaggc cctcggtggt ggtggccttg
     3961 atgctgacgc ggtcctggcg cacgcccagg atttcggcca cgcgggcctg catggcgccg
     4021 cgatgggggc cgaccttggg gcgctcgcag acgatggtga cgtccacgtt gacgatgcgg
     4081 ccgcccagcg cccgcaccag cccggcggcg tgggccagga acaggtgcga cgcggcgcct
     4141 ttccactgcg gatcggtggg cgggaaatga cggccgatgt cgccggcggc gatggcgccc
     4201 aggatggcgt cggtcagggc gtgcagcgcc acgtcggcgt ccgagtggcc ctccagcgcc
     4261 tcgtcatgcg gcacctgcac gccgcacagc cacacccctg ttcccggcgc gaaacgatga
     4321 acgtcgaaac cgctgccggt ccgcacctcg ccggcgccct cgaacgggcg gtgggcgcgc
     4381 gccaggtcgg cggcggtggt gatcttgaaa ttgtcctcgt cgcccatcac cagggccacc
     4441 gccaggccgg ccttttccgc cacggcggca tcgtcggtca gctcctggcc ggcggcggcc
     4501 ttgtgggcgg ccaggatgtc ggcgaagcgg aagccctgcg gcgtctgcgc gcgccatagc
     4561 gcggtgcggt ccacggtgtc ggcgatgcgg ccgtcggccc cgcgcttcag ggtgtcggcc
     4621 accgggatgg cggcgatggc gccgggggcg tcggcacagg cggcaatgac gcggccgatg
     4681 gtgcctgcat cgatgaaggg gcgggcgccg tc
//
LOCUS       DATIKR010000053         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_37217, whole genome shotgun sequence.
ACCESSION   DATIKR010000053 DATIKR010000000
VERSION     DATIKR010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37217"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VLL76_00880"
     CDS             complement(<1..354)
                     /locus_tag="VLL76_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28068.1"
                     /translation="MSAPDGFDEEGQAVDDASSDVARAWEKATEWVPADDPAPDAGDD
                     WDADLGDDGRENPPDVPGAGLPDNCPVVPLGVQGRVYYFLDALKQLQEVPWKDLQRSV
                     IVGLFGVGARDYLRRQ"
     gene            complement(351..1475)
                     /locus_tag="VLL76_00885"
     CDS             complement(351..1475)
                     /locus_tag="VLL76_00885"
                     /inference="COORDINATES: protein motif:HMM:NF024755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HSV28069.1"
                     /translation="MARGDTDLNQIGDMLRARVGELVRTHWDLRDGFREGHDWVCRNP
                     LRRDNEAKSFRIALSGPYQGMVKDFAGPFGRAGKDTMSALTFHAELCHAGDMGAAVKW
                     AKAWLGLDGTNPEALRATHRAVQAYDDRPVQDDEAVAKRRKLAQRVFLAGSPLRGTPG
                     WEYFKGRGLDPARLPSPINAFRFNPACFCGEVRRELPAVVMAINGMDGSFLGVHRIWI
                     AERGGRWVKNPELKRAKKAFGAYAGGTVRIWNGQRVLERTGEVVYGRDFASEKGPMRI
                     HLTEGPEDALAVALACPDERIHCAVSVYNAKSVAFPDKVTEVVLWRQADPPGSPAAIQ
                     FERVAANQHAQGKKVMVADIASVVPGVKDPAEVFQRKGGS"
BASE COUNT          228 a          609 c          531 g          251 t
ORIGIN      
        1 ttgccggcgc agatagtcgc gggcgcccac gccgaacagg ccgacgatga cgctgcgctg
       61 caggtccttc cacggcactt cctgcagctg cttcagcgcg tccaaaaaat agtacacccg
      121 gccctggacg cccaacggca ccaccgggca attgtcgggc aggccggcgc cgggcacgtc
      181 gggcgggttc tcgcggccgt cgtcccccag atcggcgtcc caatcgtcgc cggcgtcggg
      241 ggcgggatcg tcggcgggca cccattcggt cgccttctcc catgcgcgcg ccacgtcgct
      301 cgacgcgtcg tcgacggcct gcccctcttc gtcgaaccca tccggcgcgc tcacgatccc
      361 cccttgcgtt gaaacacttc ggccgggtcc ttgacgcccg gcaccacgct ggcgatatcc
      421 gccaccatca ccttcttccc ctgggcatgc tggttggccg ccacccgctc gaactgaatg
      481 gcggccgggc tgccgggtgg atcggcctgg cgccacagca ccacctcggt caccttgtcg
      541 gggaaggcca cgctcttggc gttgtagacc gacacggcgc aatggatccg ttcgtcggga
      601 caggccagcg ccaccgccag cgcgtcctcg gggccttcgg tcaggtggat ccgcatcggc
      661 cccttctccg acgcgaagtc gcggccatag accacctcgc cggtgcgctc cagcacgcgc
      721 tggccgttcc agatccgcac ggtgccgccg gcataggcgc cgaacgcctt cttggcccgt
      781 ttcagctcgg ggttcttgac ccagcggccg ccacgctccg cgatccagat gcgatgcacg
      841 ccaaggaagc tgccgtccat gccgttgatg gccatgacca cggcgggcag ctcgcgccgc
      901 acctcgccgc aaaagcaggc cgggttgaag cggaaagcgt tgatgggcga gggcaggcgg
      961 gccgggtcca ggccgcgccc cttgaaatat tcccagccgg gtgtgccgcg cagcggcgag
     1021 ccggccagga acacgcgctg cgccagcttt cggcgcttgg ccaccgcctc gtcatcctgc
     1081 accggccggt cgtcataggc ctgcaccgcg cgatgggtgg cgcgcagcgc ctccggattg
     1141 gtgccgtcca gccccagcca ggccttggcc catttgaccg cggcgcccat gtcgccggca
     1201 tggcacagct ccgcatggaa ggtcagggcc gacatggtgt ccttgccggc gcggccgaag
     1261 gggccggcga aatccttgac catgccctgg tacggccccg acagggcgat gcggaagctc
     1321 ttggcctcgt tgtcgcgccg cagcgggttg cggcacaccc aatcgtggcc ctcgcggaag
     1381 ccgtcgcgca gatcccaatg ggtgcgcacc agctcgccca cgcgcgcccg caacatgtcg
     1441 ccgatctggt tcaggtcggt gtcgccccgc gccatcaccc ggcctcctgc agccggtcgt
     1501 cggcatggcg ccaggccagc cgcacgatgg ggccggcctg gtcctcgatg cggtcgatct
     1561 cgtgccccag gaagtactcg gcgccgctcc aggcgcggca gatgcggcgg ctcatcacc
//
LOCUS       DATIKR010000054         2484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_61516, whole genome shotgun sequence.
ACCESSION   DATIKR010000054 DATIKR010000000
VERSION     DATIKR010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61516"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            227..1900
                     /locus_tag="VLL76_00890"
     CDS             227..1900
                     /locus_tag="VLL76_00890"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSV28070.1"
                     /translation="MIVDSRELPEDFLFHADVAIVGAGPAGITLAHELMGSGLTVLLL
                     EAGGAKPDDRRLDLFHGEVSDLARHPPITLYRVRAFGGGSTLWGGRCVKFDPIDFEAR
                     PHIPHSGWPVTYDEIEPWYRVANAYCEAGPCDYDSRTALPGAPPVVPGLDEARVSCAS
                     IERFSPPTDFARRYRPALARSNNVIVVLNATCTGIEPVASRQAVRHLAFASAPGRRFQ
                     VAARHAVLAAGALETARLLLAAKLGGDAVGRFYMCHLEGKAARAVFTPDTKVVFEYER
                     DRAGIYLRRRFALPPEIQRQQGLTNVILRFEPPVIADPVHGDAVLSAMWVSRTFLKRE
                     YARKLDSFGYRGAQRGSNVGLALRHLRNVAVGAPGLARFSADWLTRHVLASRKLPYVA
                     VRGRNGAFTLDYNAEQIPNPDSRVSLGNDTDAFGMPRLKVDWRVTALDVDSVVAAHAL
                     LARELEASGRGMLEIDEEVIRQGYNATGGHHIGTARMAADASAGVVDRDGRVFGMDNL
                     YVAGAATFPTSSHANPTLTIVALAARLAAHLKVQARRPSPADALAEAAE"
     gene            2065..>2484
                     /locus_tag="VLL76_00895"
     CDS             2065..>2484
                     /locus_tag="VLL76_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28071.1"
                     /translation="MKTLITVTVLLASMPALGFAAPLAAAQEANNGKPPLVSISAPAG
                     QDRVRISVSLVSYPGVPERASCRMLFKATNESRDNVELSTQLHTFNTYKTDLNSWLVP
                     TGTLKPGQTVERLYSCKAASFITLDQGSDYGWPRTCFV"
BASE COUNT          384 a          908 c          803 g          389 t
ORIGIN      
        1 ccgtggctcg tgccgccgcc cgcgcccatg gcggcgacat ccggttggag aaccgcgagg
       61 gcggcggcct gagggcgcgg ctcatccttc cgcgatcggc ctgaccgccg gataggtccg
      121 gaagttccct tcccctccca cggagtcgcg gcgcaccccc agtgcatccc gcagcgcggc
      181 aatgcacaga ccatgttcat gggcgaacct tgccggaggt ccatggatga tcgtcgattc
      241 gcgggaactg cccgaggatt tcctgttcca tgcggacgtc gccatcgtcg gggccggccc
      301 cgccggcatc accttggctc acgaattgat gggcagcggg ctgaccgtac tgctactgga
      361 agccggcggc gccaagcccg acgaccgccg gctcgacctg ttccacggcg aggtttcaga
      421 cctcgcccgc catccgccca tcaccctgta ccgcgtgcgc gccttcggcg gtggcagcac
      481 gttgtggggt ggccgctgcg tcaagttcga ccccatcgac ttcgaggccc ggccgcacat
      541 cccccacagc ggctggcccg ttacctatga cgagatcgag ccgtggtacc gcgtcgccaa
      601 cgcctattgc gaggccgggc cgtgcgacta cgactcccgc accgccctgc ccggggcgcc
      661 gccggtggtg ccgggcctcg acgaggcgcg ggtgtcgtgc gccagcatcg agcggttctc
      721 gccgcccacc gactttgccc gccgctaccg ccccgccctc gcccgctcga acaatgtgat
      781 cgtggtgctg aacgccacct gcaccggcat cgagccggtc gcgtcgcgcc aggcggtgcg
      841 gcacctcgcc ttcgcctcgg cgcccgggcg ccgcttccag gtggccgccc gccatgcggt
      901 gctggcggcc ggcgcgctgg agacggccag gctgctgctg gcggcgaagc tgggcggcga
      961 cgcggtggga cggttctaca tgtgccacct ggagggcaag gcggcccggg cggtgttcac
     1021 ccccgacacc aaggtggtgt tcgagtacga gcgcgaccgc gccggcatct atctgcgccg
     1081 ccgcttcgcg ctaccgcccg agatacagcg ccagcagggc ctgaccaacg tcatcctgcg
     1141 cttcgaaccg ccggtgatcg ccgacccggt ccacggcgac gcggtgctgt cggccatgtg
     1201 ggtgtcgcgc accttcctga agcgggaata cgcccgcaag ctcgacagct tcggctatcg
     1261 cggcgcccag cgcggcagca atgtgggcct ggcgctacgg cacctgcgca acgtcgccgt
     1321 cggcgcgccg gggctggccc ggttctccgc cgactggctg acccgccacg tgctggcctc
     1381 gcgcaagctg ccctatgtgg cggtgcgcgg gcgcaacggc gccttcaccc tggactacaa
     1441 cgccgagcaa atccccaatc ccgacagccg ggtgtccctg ggcaacgaca ccgacgcctt
     1501 cggcatgccg cgcctcaagg tggactggcg ggtcaccgcc ctggacgtgg acagcgtcgt
     1561 cgccgcccac gccctgctgg cgcgggagtt ggaggccagc ggccggggaa tgctggagat
     1621 cgacgaagag gtcatccgcc agggctacaa cgccaccggc ggccaccata tcggcaccgc
     1681 ccgcatggcc gccgacgcct cggccggggt ggtggaccgc gacggccggg tgttcggcat
     1741 ggacaacctt tatgtggccg gcgccgccac cttccccacc tcgagccacg ccaacccgac
     1801 cctgaccatc gtcgccctgg ccgcccgcct ggccgcccat ctcaaggtcc aggcccgccg
     1861 cccctcgccc gccgatgcgt tggcggaggc cgccgaatga ccgcaagaca aacagacgaa
     1921 tgaaattcat aaaatttgat acaactcgac agaattggtg acaattcaag tcttcgaaac
     1981 gctcattcgg gatggaccca gtaaccgatt cgtgacattg tttggtctgg gaagggggcg
     2041 gcttgatgga ggcccggaag ggtcatgaag acgctcatca cggttaccgt tttgctggcc
     2101 tcgatgccgg ccctgggctt cgcggcacct ttggccgcgg cgcaggaagc caacaacggc
     2161 aagcccccgc tggtctcgat ttcggctccc gccggccagg accgcgtgcg catcagcgtc
     2221 agtctggtca gctatcccgg cgtgcccgag cgcgcctcgt gccgcatgct gttcaaggcg
     2281 accaacgaaa gccgcgacaa cgtcgagctt tcgacccagc tgcacacctt caacacctac
     2341 aagaccgatc tcaattcctg gctggtcccg accgggacgt tgaagcccgg ccagaccgtc
     2401 gaacggctgt attcctgcaa ggcggccagc ttcatcacgc tggaccaggg atctgattac
     2461 ggctggccgc gcacctgctt cgtc
//
LOCUS       DATIKR010000055         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_182185, whole genome shotgun sequence.
ACCESSION   DATIKR010000055 DATIKR010000000
VERSION     DATIKR010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182185"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2066)
                     /gene="alaS"
                     /locus_tag="VLL76_00900"
     CDS             complement(<1..>2066)
                     /gene="alaS"
                     /locus_tag="VLL76_00900"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HSV28072.1"
                     /translation="KSAEMREKFLKFFESKGHQIVASSSLVPHEDPTLLFTNAGMNQF
                     KDVFLGFDKRPYSRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKE
                     TAIELAWNLITKEFGLPKDKLLVTVYHDDDEAAGAWKRIAGFSDDRIIRIPTSDNFWA
                     MGDTGPCGPCSEIFYDHGDKIPGGPPGSPDQDGDRFIEIWNLVFMQFEQVDKDTRVPL
                     PKPSIDTGMGLERLAAVLQGKHDNYDIDLMRNLIEASANASGADVDGPHKISHRVVAD
                     HLRSMCFLIADGVLPSNEGRGYVLRRIMRRAMRHAHLMGCSEPLMWRLVPALVREMGD
                     AYPELGRAQALITETLKLEETRFKTTLDKGLKLLDEEIVKLGGKALPGEVAFKLYDTY
                     GFPLDLTQDALKAKNIAVDTDGFNAAMERQRAEARKAWSGSGEAATESLWFEIREAHG
                     ASEFLGYDAVEAEGKIVALVENGKAVEAVHPGHEVMLVANQTPFYGESGGQMGDMGVV
                     TVAGGKARVVVKDTLKKLGDLVVHVGTVEGGPVAVGEDAHFQVDIERRDATRAHHSAT
                     HLLHAALRNNLGGHVTQKGSQVGPDRLRFDFAHPKAMTMDEIRAVEREVNRQIRKNRD
                     VGTKLMTPDEAIKAGAMALFGEKYGDEVRVVSMGGDDAGLHFSVELCGGTHVRRTGDI
                     GLFKIV"
BASE COUNT          297 a          655 c          728 g          386 t
ORIGIN      
        1 cgacgatctt gaacaggccg atgtcgccgg tgcggcgcac atgggtgccg ccgcacagct
       61 cgaccgagaa atgcaggccg gcatcgtcgc cgcccatgga gacgacgcgg acctcgtcgc
      121 cgtacttctc gccgaacagc gccatggcgc cggccttgat ggcctcgtcc ggggtcatca
      181 gcttggtgcc gacgtcgcgg ttcttgcgga tctggcggtt gacctcgcgc tcgacggcgc
      241 gaatctcgtc catggtcatc gccttgggat gggcgaagtc gaagcgcagg cggtcggggc
      301 cgacctggct gcccttctgg gtgacgtggc cgcccaggtt gttgcgcagc gccgcgtgca
      361 gcaggtgggt cgccgagtgg tgggcgcggg tggcgtcgcg gcgttcgatg tccacctgga
      421 agtgggcgtc ctcgcccacc gccaccgggc cgccctcgac ggtgccgaca tgcaccacca
      481 ggtcgcccag cttcttcagc gtgtccttga ccaccacgcg ggccttgccg ccggcgacgg
      541 tgacgacgcc catgtcgccc atctggccgc ccgattcgcc gtagaacggg gtctggttgg
      601 cgaccagcat gacctcgtgg ccgggatgga cggcttccac cgccttgccg ttctcgacca
      661 gggcgacgat cttgccctcg gcctcgacgg cgtcatagcc caggaactcg ctggcgccgt
      721 gggcctcgcg gatttcgaac cacaggcttt cggtggcggc ctcgcccgag ccggaccacg
      781 ccttgcgggc ctcggcgcgc tggcgctcca tggcggcgtt gaagccgtcg gtgtccaccg
      841 cgatgttctt ggccttcaac gcgtcctggg tcaggtcgag cgggaagccg taggtgtcgt
      901 agagcttgaa ggcgacctcg ccgggcaggg ccttgccgcc cagcttgacg atttcctcgt
      961 ccagcagctt caggcccttg tccagcgtgg tcttgaagcg ggtctcttcc agcttcagcg
     1021 tctcggtgat cagggcctgg gcgcggccca gttcgggata ggcgtcgccc atctcgcgca
     1081 ccagggcggg gaccaggcgc cacatcagcg gctcgctgca gcccatcagg tgggcgtggc
     1141 gcatggcgcg gcgcatgatg cggcgcagca cgtagccgcg gccctcgttg gacggcagca
     1201 cgccgtcggc gatcaggaag cacatggagc gcaggtggtc ggcgacgacg cggtggctga
     1261 tcttgtgcgg accgtcgacg tcggcgcccg acgcgttggc cgaggcctcg atcaggttgc
     1321 gcatcaggtc gatgtcgtaa ttgtcgtgct tgccctgcag cacggcggcc aggcgctcga
     1381 ggcccatgcc ggtgtcgatg ctgggcttgg gcaggggcac gcgggtgtcc ttgtccacct
     1441 gctcgaactg catgaacacc aggttccaga tctcgatgaa gcggtcgccg tcctggtcgg
     1501 ggctgccggg cgggccgccg gggatcttgt cgccgtggtc gtagaagatt tccgagcacg
     1561 ggccgcacgg gccggtgtcg cccatggccc agaaattatc cgaggtcggg atgcggatga
     1621 tgcggtcgtc cgagaagccg gcgatgcgct tccacgcgcc ggccgcctcg tcgtcgtcat
     1681 gatagacggt gaccagcagc ttgtccttgg gcagcccgaa ttccttggtg atcaggttcc
     1741 aagccagctc gatggcggtt tccttgaaat agtcgccgaa cgagaaattg cccagcatct
     1801 cgaagaaggt gtggtggcgg gcggtgtagc cgacattgtc gaggtcgttg tgcttgccgc
     1861 cggcgcgcac gcatttctgg gaggtggtgg cgcggctgta ggggcgcttg tcgaaaccca
     1921 ggaagacatc cttgaactgg ttcatcccgg cattggtaaa cagcagggtc gggtcctcgt
     1981 ggggcaccag ggaactggag gccacgatct gatggccctt ggactcgaag aacttgagga
     2041 atttctcgcg catttcagcg cttttc
//
LOCUS       DATIKR010000056         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_158188, whole genome shotgun sequence.
ACCESSION   DATIKR010000056 DATIKR010000000
VERSION     DATIKR010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158188"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..99
                     /locus_tag="VLL76_00905"
     CDS             <1..99
                     /locus_tag="VLL76_00905"
                     /inference="COORDINATES: protein motif:HMM:NF022829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2795 domain-containing protein"
                     /protein_id="HSV28073.1"
                     /translation="ADQDVLEVINKMPDSEYTSMADVFKGVGEVKH"
     gene            complement(131..1564)
                     /gene="tldD"
                     /locus_tag="VLL76_00910"
     CDS             complement(131..1564)
                     /gene="tldD"
                     /locus_tag="VLL76_00910"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HSV28074.1"
                     /translation="MPHDAHAHELFFVRAGLDPDEVGKIVAESLAGSDDGELFLEYRQ
                     SESLLLDDRQIKSASFDTAQGFGLRAVAGEAHGYAHGSELSADAIRRAGETVKAVRLG
                     HTGTMAEGPAGTNRSLYTDLNPLALIPFETKVKLLEEIDAYARGREPRVKQVSASLAG
                     SWQAVYILRADGTHAADIRPLVRVNVSVVLGQGDRMETGSHGVGGRATYDGFISVPSW
                     RKCVDEALRQAAVNLDSVPAPAGEMPIVLGPGWPGVMLHEAVGHGLEGDFNRKGTSAF
                     SGRIGERVAAKGVTVVDDGTMPDHRGSITIDDEGTPSGRTVLIEDGILVGYLQDRLNA
                     RLMGVKATGNGRRQSYAHAPMPRMTNTFMEAGDKDPAEIIASVKKGIYAVNFGGGQVD
                     ITSGKFVFAATEAYLIEDGRLGPAVKGATIIGNGPDALTRVSMIGTDLQIDPGIGTCG
                     KDGQGCPVGVGQPTLRIDGLTVGGTAV"
     gene            1691..>2152
                     /locus_tag="VLL76_00915"
     CDS             1691..>2152
                     /locus_tag="VLL76_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3422 family protein"
                     /protein_id="HSV28075.1"
                     /translation="MTETIAITMPTMREHELRRSLAGEVHARPYEQLTAPMRASHLAV
                     LHDGADAAGERAFVAELLVQHGGEAPGEGANYVSRDLGGLRLRWERHSEFSTYTFFRT
                     DAFDQPFAAAALDLVGQDWLRRMPGEVMTAVHVALEAAERAADDLSAQFDGN"
BASE COUNT          314 a          735 c          772 g          331 t
ORIGIN      
        1 gccgaccagg acgtgctgga ggtcatcaac aagatgcccg attccgaata cacatccatg
       61 gccgacgtct tcaagggcgt gggcgaggtg aagcactgac ggtaggccgg gcggggacga
      121 cccgcccggc ctacaccgcc gtgccgccga cggtcaggcc gtcgatgcgc agggtaggct
      181 ggccgacgcc caccgggcag ccctggccgt ccttgccgca ggtgccgatg ccggggtcga
      241 tctgcaaatc ggtgccgatc atggacacgc gggtcagcgc gtcgggaccg ttgccgatga
      301 tggtggcgcc cttgacggcg gggcccagcc tgccgtcctc gatcagatag gcctcggtgg
      361 cggcgaacac gaacttgccc gaggtgatgt ccacctgtcc gccgccgaaa ttgacggcgt
      421 agatgccctt cttgaccgag gcgatgatct cggccgggtc cttgtcgccg gcttccatga
      481 aggtgttggt catgcgcggc atgggcgcgt gggcatagga ttggcggcgg ccgttgccgg
      541 tggccttgac gcccatcagg cgggcgttga ggcggtcctg cagatagccc accaatatgc
      601 cgtcctcgat cagcacggtg cggcccgagg gcgtgccctc gtcgtcgatg gtgatcgagc
      661 cgcgatggtc gggcatggtg ccgtcgtcca ccacggtgac gcccttggcg gcgacgcgct
      721 caccgatgcg gcccgagaag gcgctggtgc ccttgcggtt gaagtcgccc tccaggccgt
      781 ggccgaccgc ctcgtgcagc attacgccgg gccagcccgg acccagcacg atgggcatct
      841 cgccggccgg ggcgggcacc gaatccaggt tcaccgccgc ctggcgcagc gcctcgtcca
      901 cgcatttgcg ccagctcggc accgagatga agccgtcata ggtggcgcgg ccgccgacgc
      961 cgtggctgcc ggtttccatg cggtcgccct ggcccagcac caccgacacg ttgacccgca
     1021 ccagcgggcg gatgtcggcg gcatgggtgc cgtcggcgcg caggatgtag accgcctgcc
     1081 acgacccggc cagcgaggcc gagacctgct tgacgcgcgg ctcgcggcca cgggcgtagg
     1141 catcgatctc ctccagcagc ttgaccttgg tctcgaaggg gatcagggcc agcgggttga
     1201 ggtcggtata gagcgagcgg ttggtgccgg ccggcccctc ggccatggtg ccggtatggc
     1261 ccagccgcac cgccttgacc gtctcgccgg cgcggcggat ggcgtcggcc gacagttccg
     1321 agccgtgggc atagccgtgc gcctcgcccg ccaccgcgcg caggccgaag ccctgggcgg
     1381 tgtcgaagct ggcgctcttg atctggcggt cgtccagcag caggctttcc gactggcggt
     1441 attccaggaa cagctcgccg tcatccgagc cggccagcga ttcggcgacg atcttgccca
     1501 cctcgtccgg gtcgagaccg gcgcggacga agaacagttc gtgggcgtgg gcgtcgtgcg
     1561 gcatgggggc tcctggggaa agggcgttcc gtccaatata ggcgatgggc gccgggatac
     1621 cagacgcttg aggttggcag cgccgcccct cgggtgtaaa ccggcagcag gacttccagg
     1681 ggacccggcc atgaccgaga ccatcgccat cacgatgccc accatgcgcg agcatgaatt
     1741 gcgccgctcg ctggccggcg aggtccacgc ccggccctac gagcaactga cggcgccgat
     1801 gcgcgccagc catctggcgg tgctgcacga cggcgccgac gcggcgggcg agcgcgcctt
     1861 cgtcgccgaa ttgctggtgc agcatggcgg cgaggcgccg ggcgagggcg ccaattacgt
     1921 cagccgcgac ctgggcggac tgcggctgcg ctgggaacgc cattccgagt tttcgaccta
     1981 caccttcttc cgcaccgacg cgttcgacca gcccttcgcc gccgccgccc tcgatctggt
     2041 gggccaggac tggctgcggc ggatgcccgg cgaggtgatg accgccgtgc atgtggcgct
     2101 cgaggccgcc gagcgcgccg ccgacgacct gtcggcgcag ttcgacggca ac
//
LOCUS       DATIKR010000057         2421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_206516, whole genome shotgun sequence.
ACCESSION   DATIKR010000057 DATIKR010000000
VERSION     DATIKR010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206516"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VLL76_00920"
     CDS             <1..191
                     /locus_tag="VLL76_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28076.1"
                     /translation="HRLLSAFNAATLELCREDNLTCLDLASELDFADGDFYDVVHNTP
                     QGAEKVGRWLAGKLTALE"
     gene            248..916
                     /gene="hisG"
                     /locus_tag="VLL76_00925"
     CDS             248..916
                     /gene="hisG"
                     /locus_tag="VLL76_00925"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HSV28077.1"
                     /translation="MEDKLVIALPKGRILDEAMPLVRAAGIEPEPEFDNPKTRLLRFA
                     TNHPHIDIIRVRSFDVATFVAFGAAHLGVAGNDVLMEFDYPEIYAPLDLGIGKCRLSV
                     AEPKDMADEDDPRRWSHVRIATKYPEVTRRFFAERGVQAECVKLNGAMELAPSLGLCS
                     RIVDLVSTGSTLVANGLKEVEVIADVTSRLIVNRAALKTRPDEMTMWIERFRSAREAA
                     NAAA"
     gene            903..2201
                     /gene="hisD"
                     /locus_tag="VLL76_00930"
     CDS             903..2201
                     /gene="hisD"
                     /locus_tag="VLL76_00930"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HSV28078.1"
                     /translation="MLQLDARQPDFEEAFLRLLSMKRETDEDVNAVVASVLADVKKRG
                     DAALIDYTARFDRLQLTPETLRVTAAEIEAAAAQCDTSLMESLALAAERIRDFHVRQL
                     PSGYQYVDEAGVKLGQRWTAVDSVGLYVPGGTAAYPSSVLMNAVPAKVAGVERLVMVV
                     PTPDGKLNPLVLAAAKLAGVDEIYRVGGAQAVGALAYGTQTIRPVDKIVGPGNAYVAA
                     AKRQVFGTVGIDMIAGPSEILVIADGANDPSWIAADLLSQAEHDAAAQSILITDDAAF
                     GSRVAEAVESHLKTLPRAAIARESWDAHGAIIVVPALADAVPLADRIAAEHLELAVAD
                     PLPLAEKIRHAGAMFLGRYTPEAVGDYVGGPNHVLPTARSARFSSGLGVLDFMKRTTI
                     LDCSAEALRAIGPAAVTLAEAEGLGAHGLSVAIRLNMGQG"
     gene            2205..>2421
                     /locus_tag="VLL76_00935"
     CDS             2205..>2421
                     /locus_tag="VLL76_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HSV28079.1"
                     /translation="MPHRQRIVHVQLDEKTMVRRRPEVEHERNIAIYDLLEDNYFAPI
                     GDFRGPYNVHLRLEDNRLVFDIRSQEDA"
BASE COUNT          387 a          876 c          793 g          365 t
ORIGIN      
        1 agcaccgcct gctgtcggcc ttcaacgccg ccactctcga gctgtgccgc gaagacaacc
       61 tgacctgcct ggacctcgcc tcggagctgg atttcgccga cggcgacttc tacgacgtgg
      121 tccacaacac gccccaggga gccgagaagg tgggtcgctg gttggccggc aagctcaccg
      181 cactggaata ggcggggatt tggggttaaa cagaacaccc cctttcgcga ggttcccgac
      241 ggtggtgatg gaagacaagc ttgtgatcgc gctccccaag gggcgcatcc tcgacgaggc
      301 gatgccgctg gtgcgtgccg ccggcatcga gcccgaaccg gaattcgaca acccgaagac
      361 ccggctgctg cgctttgcca ccaaccatcc ccatatcgac atcatccgcg tgcggtcgtt
      421 cgacgtggcg accttcgtcg ccttcggcgc cgcccatctt ggcgtggcgg gcaacgacgt
      481 gctgatggag ttcgactatc ccgagatcta cgcgccgctg gacctcggca tcggcaagtg
      541 ccgcctgtcg gtggccgagc ccaaagacat ggccgacgaa gacgatcccc gccgctggag
      601 ccacgtgcgc atcgccacca agtaccccga ggtgacgcgc cgcttcttcg ccgaacgcgg
      661 cgtccaggcc gaatgcgtca agctcaacgg cgccatggag ctggcgccgt cgctgggcct
      721 gtgctcgcgc atcgtcgacc tggtgtcgac cggctcgacc ctggtggcca acggcctcaa
      781 ggaggtcgag gtcatcgccg acgtcacctc gcgcctgatc gtcaaccgcg ccgccctcaa
      841 gacccgaccc gacgagatga ccatgtggat cgagcgtttc cgttccgccc gcgaggccgc
      901 caatgctgca gcttgacgcc cgccagccgg atttcgagga ggcgttcctc cgcctgctgt
      961 ccatgaagcg cgagaccgac gaggacgtta acgccgtcgt cgcctcggtg ctggccgatg
     1021 tgaagaagcg cggcgacgcc gccctgatcg actacaccgc ccgcttcgac cgtctgcagc
     1081 tgacgcccga gaccctgcgc gtcaccgccg ccgagatcga ggccgccgcc gcccagtgcg
     1141 acacgtcgct gatggagtcg ctggccctgg cggccgagcg catccgcgac ttccatgtcc
     1201 gccagttgcc cagcggctat cagtacgtgg acgaggccgg cgtcaagctg ggccagcgct
     1261 ggaccgcggt ggattcggtc ggcctctacg tgcccggcgg caccgccgcc tatccgtcgt
     1321 cggtgctgat gaacgcggtg ccggccaagg tggcgggcgt cgagcggttg gtcatggtgg
     1381 ttcccacccc cgacggcaag ctcaacccgc tggtgctggc cgccgccaag ctggccggcg
     1441 tggacgagat ctaccgcgtc ggcggcgccc aggcggtggg cgcgctggcc tatggcaccc
     1501 agaccatccg gccggtggac aagatcgtcg gccccggcaa cgcctatgtc gccgccgcca
     1561 agcgccaggt gttcggcacc gtcggcatcg acatgatcgc ggggccgtcg gaaatcctgg
     1621 tcatcgccga tggcgccaac gatccctcct ggatcgccgc cgacctgctg agccaggccg
     1681 agcacgacgc cgccgcccag tcgatcctga tcaccgacga cgccgcgttc ggaagccgcg
     1741 tcgccgaggc ggtggaaagc catctcaaga ccctgccgcg cgccgccatc gcccgcgaga
     1801 gctgggacgc ccacggcgcc atcatcgtgg tgccggccct ggccgatgcc gtgccgctgg
     1861 ccgaccgcat cgccgccgag catctggaac tggcggtggc cgacccgctg ccgctggccg
     1921 agaagatccg ccacgcgggc gccatgttcc tgggccgtta caccccggaa gcggtcggcg
     1981 actatgtcgg cggccccaac cacgtgctac cgacggcacg ctcggcgcgg ttctcgtcgg
     2041 gcctgggggt gctcgatttc atgaagcgca ccaccatcct ggattgctcg gccgaggcgc
     2101 tgcgcgccat cgggccggcg gcggtgacgc tggccgaggc cgagggactg ggcgcccacg
     2161 gcctgtcggt cgccatccgc ctcaacatgg gacagggctg acccatgccg caccggcagc
     2221 gcatcgtgca cgtccaactg gacgaaaaga ccatggtgcg ccgccgcccc gaggtcgagc
     2281 acgagcgcaa catcgccatc tacgacctgc tggaggacaa ttacttcgcc cccatcggcg
     2341 acttccgggg gccgtacaac gtccacctgc ggctcgagga caaccggctg gtgttcgaca
     2401 tccgcagcca ggaggatgcc g
//
LOCUS       DATIKR010000058         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_218806, whole genome shotgun sequence.
ACCESSION   DATIKR010000058 DATIKR010000000
VERSION     DATIKR010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218806"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VLL76_00940"
     CDS             <1..231
                     /locus_tag="VLL76_00940"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HSV28080.1"
                     /translation="ASLAWLRRRGVVRPGWNGGNGGRERRLEVLDRVALAPQHWLHLV
                     RVDDRVILVGRSPAGITRLAVAERRAGEGGNQ"
     gene            228..968
                     /gene="fliP"
                     /locus_tag="VLL76_00945"
     CDS             228..968
                     /gene="fliP"
                     /locus_tag="VLL76_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008062670.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HSV28081.1"
                     /translation="MKRLLKAAVTLAATPALWAAAPQSGWFSVGAPAGSGGAALSMPL
                     QIVVLMTLLTLLPAAVVSVTPFLRITVVLHFLRQALGTQSTPSNQVLVGLSLFLTILI
                     MQPVGAQIYDQAWAPMENNRLTPSQAFEEGAKPLKAFLVRFAREKDIRLFLEISKTPA
                     PPTPAELDLKVLIPAYILSELKAGFQIGAVIFLPFLVIDLVVASVVLSVGMIQLPPVM
                     ISAPFKILLFVLVDGWNLTVGSLVKSFY"
     gene            977..1246
                     /locus_tag="VLL76_00950"
     CDS             977..1246
                     /locus_tag="VLL76_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011689085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="HSV28082.1"
                     /translation="MTPELAVEVLRQALIATFWLGAPLLAIGFAAGIVISLIQITTSI
                     QDTAFSTVPRLAAFLVGLLLLMPWMFKRLSMYTISLFGDLGRYAR"
     gene            1236..>1719
                     /locus_tag="VLL76_00955"
     CDS             1236..>1719
                     /locus_tag="VLL76_00955"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HSV28083.1"
                     /translation="MPAELSLPVTTLVAFLLVATRVGAALVFVPIPGIRKGAAPARIV
                     LVLALTMLLYPQWPVLAAPPPMGLMAAWLVADAAIGILAGVLVGFIAESFQVAAQAVG
                     LEAGFAYASMVDPQTKADSGILLVFAQLGSGLIFFALGLDREVIRIFARSLETLPPGA
                     I"
BASE COUNT          223 a          540 c          626 g          330 t
ORIGIN      
        1 gcctcgctgg cgtggctgcg aaggcgcggc gtggttcgac cgggctggaa cggcggaaac
       61 ggggggcggg agcggcgcct ggaggtgctg gaccgggtgg cgctcgcgcc tcagcactgg
      121 ctgcacctgg tgagggtgga cgaccgggtc attctggtgg gccgctcccc ggcgggcatc
      181 acacgcctgg cggtcgccga gcggcgcgcc ggggagggtg gcaaccagtg aagaggcttc
      241 tcaaggcggc cgtgacgctg gcggcaaccc cggctctgtg ggcggcggcc ccccagtcgg
      301 gctggttctc ggtgggggcg ccggccggta gcggcggcgc ggcgctgagc atgccgctgc
      361 agatcgtggt tctgatgacg ctgctgacgc tgctgccggc ggcggtggtg tcggtgacgc
      421 cgtttctgag gatcacggtg gtgctgcact tcctgcgaca ggcgttgggg acgcagtcca
      481 cgccctccaa ccaggtgctg gtcgggctgt cgctgttcct caccatcctg atcatgcagc
      541 cggtgggcgc ccagatctac gaccaggcgt gggcgcccat ggagaacaac cggctcactc
      601 cctcgcaggc gttcgaggaa ggcgccaagc ccctgaaggc gttcctggtg cgcttcgcca
      661 gggagaagga catccggctg tttttggaaa tctccaagac gccggcgccg ccgacgccgg
      721 cggaactgga cctgaaggtt ctgatcccgg cctacatcct gtcggagctg aaagcgggct
      781 tccagatcgg ggcggtaatc ttcctgccgt ttctggtgat cgacctggtg gtggcctcgg
      841 tggtcctctc ggtgggcatg atccaactgc ccccggtgat gatctcggcg cctttcaaga
      901 tcctgctgtt cgtcctggtg gacggctgga acctgaccgt aggatcgctg gtgaagagtt
      961 tctactgagg actcccatga cccccgaact ggcggtggaa gtgctgcggc aggctctgat
     1021 cgcgacgttc tggctgggcg cgccgctgct ggcgatcggc tttgcggcgg gcatcgtgat
     1081 cagcctgatc cagatcacca ccagcatcca ggacacggcc ttcagcacgg tgccccggct
     1141 ggccgcattc ctggtgggcc tgctgctgct gatgccctgg atgttcaagc ggttgtcgat
     1201 gtacacgatc tcgctgttcg gagacctggg ccgctatgcc cgctgagctg tcattgccgg
     1261 tgaccacgct ggtggccttc ctgctggtag ctacgcgcgt cggcgcggcc ctggtcttcg
     1321 tgccgatacc gggcatccgc aagggagcgg cgccggcccg gattgtgctg gttctggcgc
     1381 tgaccatgct cctgtatccc caatggccgg tgctggccgc accacccccg atgggactga
     1441 tggcggcgtg gctggtggcc gacgccgcca tcggcatcct ggccggcgtg ctggtgggct
     1501 tcatcgcgga gtcctttcag gtggcggccc aggcggtggg cctggaggcc ggcttcgcct
     1561 acgcctcgat ggtcgacccg cagaccaagg cggactccgg gatcttgctg gtgttcgcgc
     1621 aactgggatc cggcctgatc tttttcgccc tggggctgga ccgggaggtg atccggattt
     1681 tcgcccggag cctggagacc ttgccgccgg gggccatac
//
LOCUS       DATIKR010000059         3470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_49178, whole genome shotgun sequence.
ACCESSION   DATIKR010000059 DATIKR010000000
VERSION     DATIKR010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49178"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="VLL76_00960"
     CDS             <1..685
                     /locus_tag="VLL76_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV28084.1"
                     /translation="VMWVAVAPALLAVAVLIVGVHEPAGAARPAGARSPVMLATARRL
                     PRSLWLVVALGGVFTLARFSEAFLVLRAQEVGLGLGYVPMVLIAMNAVYATAAYPAGV
                     AADRFSRRALLAAGLLVLVAADLVLAAAESPPLAFVGAGLWGLHMGLTQGLFAKLVAD
                     SAPADLRGTAFGIFNLAVGVALLLASAIAGILWSRFGAPATFLAGAVFALIALLGLFA
                     GGGLRRHRN"
     gene            989..1759
                     /locus_tag="VLL76_00965"
     CDS             989..1759
                     /locus_tag="VLL76_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV28085.1"
                     /translation="MIDLGWLGYIEFSWKFVLAVGSIVLIDLVLAGDNAVVIAMAVKN
                     LKGKQRTLGIMLGSGGAVVVRVACTFLVAQLLTMPYVKLIGGAVIIWIAVKLLTDSAE
                     EEGHGKEANSIWQALWIIIVADISMGIDNMLAVGAASHGNLFLLLFGLILSIPFVVFM
                     STMLAKLMDRYPIILWIGAALLGKVGGEMMATDPFVVGLFNLPHWAEYVSMAVFVIFV
                     CGFSKWVLMRRKANGGAAAVNGVHAAAAVEPDKGQGHK"
     gene            complement(1895..3022)
                     /locus_tag="VLL76_00970"
     CDS             complement(1895..3022)
                     /locus_tag="VLL76_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006716866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSV28086.1"
                     /translation="MKSNYRYVLPEIQALLGSKDLFAKAKGEPTRFSYADALLALGAS
                     NPEVVSLDADVSKSMKTTMFAAKYPERSFNFGIAEQNMMAAAAGMATTGLIPFANTYA
                     VFASMRALDQVRNSIHYPRLNVKIAASHSGITPGPDGVTHQAQEDLSIMRALAGSTVI
                     APADPTSTRMAVHAAAAYEGPVYLSFTRDPVPVLYDESFPFRIGKAVTVREGRDVAIV
                     ANRDLVVQALIAAELLAKKGVDARVIDCHTLKPLDAQAVLKAARDTGAIVTAENNIIF
                     GGLGSAVAELLGEKLPTPMQRVGVQDTFAESGPYLEVIDKYGLTARHIVKAVNAVLKR
                     VPRRAPATKAKAASAPKAVQRKPKARPKSLKAKAPLKKARR"
     gene            complement(3012..>3470)
                     /locus_tag="VLL76_00975"
     CDS             complement(3012..>3470)
                     /locus_tag="VLL76_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011462198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV28087.1"
                     /translation="GLGMALAGKLRKKDYHVWVVVGDGESQEGSVWEAAMAAPKWKLD
                     NFTVIVDRNHLQNDYCVDDEMPVEPLADKWRAFNWHVETIDGHSMEQVVAALEAAHER
                     KGIPTAIIAETVKGKGVSFMENVADWHGKAPCASEADQALCEIRRCTCEI"
BASE COUNT          492 a         1153 c         1181 g          644 t
ORIGIN      
        1 cgtgatgtgg gttgcggtcg ccccggccct gctcgccgtg gcggtgctga tcgtgggcgt
       61 gcacgagcct gccggcgctg cccgtccggc gggtgcgcgc agcccggtca tgctggcgac
      121 cgcccggcgc ctgccgcggt ccctctggct cgtcgtggcg ctcggcgggg tcttcaccct
      181 ggcgcgcttc agcgaggcct tcctggtgct gcgcgcgcag gaggtggggc tcggcctggg
      241 gtatgtgccg atggtgctca tcgcgatgaa cgcggtctac gcgaccgccg cctatccggc
      301 gggggtcgcc gccgaccggt tcagccgccg ggcgctgctc gccgcggggc tcttggtcct
      361 ggtcgccgcc gacctcgtgc tggccgcggc cgagtccccg ccgctcgcct ttgtcggcgc
      421 ggggctctgg gggttgcaca tgggcctcac gcaggggctc ttcgccaagc tcgtcgccga
      481 cagcgccccg gccgatctgc gcggcacggc ctttgggatt ttcaacctcg ccgtcggggt
      541 cgcgctgctg ctggccagcg ccatcgccgg tatcctgtgg agccggttcg gggccccggc
      601 cacgtttctg gccggtgcgg tcttcgccct gatcgccttg ctcggcctgt tcgcgggcgg
      661 gggcctccga agacaccgca actgaggcgc tgccgcccca aatggggaag gcccgcatgt
      721 ctacttgccg gttacggccg gccgctcgtg taacttcttg ggggacaccc ccccgcctga
      781 ttgttcaggg acgcccgcgc gcggaacgca ccgcgccgcc gcatcggcta atgaaattgg
      841 gcgattactg acgggccggc ggggacatcg cccggcagcc gccgggtggc acgcattttg
      901 attggagctt caaggatacg attctgaaaa ctaaaacctt ttccagtacc gagcagccgg
      961 ttacccattc acaaaaagga gagtggcaat gatcgatctt ggctggctgg gctacatcga
     1021 gttttcgtgg aagtttgtcc tggcggtggg cagcatcgtg ctcatcgacc tggtgctggc
     1081 cggcgacaac gccgtggtca tcgccatggc ggtcaagaac ctgaaaggca aacaacgcac
     1141 actcggcatc atgctcggtt ccggcggcgc ggtcgtggtc cgggtggcct gcaccttcct
     1201 ggtggcccag ctgctgacca tgccctacgt caagctgatc ggcggggcgg tgatcatctg
     1261 gatcgccgtc aagctgctga ccgacagcgc cgaggaggaa ggccatggga aggaagccaa
     1321 cagcatctgg caggcgctgt ggatcatcat cgtggccgac atcagcatgg gcatcgacaa
     1381 catgctcgcc gtgggcgccg ccagccacgg caacctgttc ctgctgctct tcggcctgat
     1441 cctgtccatc cccttcgtgg tcttcatgag cacgatgctg gccaagctga tggaccgcta
     1501 cccgatcatc ctgtggatcg gtgcggcgct gctgggaaag gtgggcggcg agatgatggc
     1561 gaccgacccc ttcgtcgtcg gcctcttcaa cctgccccac tgggcggagt acgtctcgat
     1621 ggcggtcttc gtgatttttg tctgcggctt cagcaagtgg gtcctgatgc ggcgcaaggc
     1681 gaacggcggg gcggcggcgg tcaacggcgt ccacgcggcc gcggcggtcg agcccgacaa
     1741 gggccaaggc cacaagtaat ccctgacctg cagcacaaaa caacgccctc ctccgcagcg
     1801 cggaaggagg gcgttgtcgt tgcaaaaacc atcacaaaca gacgagagcc catcgccggt
     1861 tggtcgatgg gctctttttt tgagccaact tgagctaccg gcgcgccttc ttcagcgggg
     1921 ccttcgcttt gaggctcttg ggcctggcct tcggcttcct ctgcacagcc ttgggcgccg
     1981 aagcggcttt ggccttggtg gccggcgccc ggcgaggaac ccgtttgagc accgcgttca
     2041 cggccttgac gatgtggcgc gcagtgagcc cgtacttgtc gatcacctcg aggtagggac
     2101 cggactcggc aaaagtgtcc tgcacgccga cccgctgcat cggggtgggc agcttctccc
     2161 ccagcagctc ggccaccgca ctgcccaggc cgccgaaaat gatgttgttc tcggcggtga
     2221 cgatggcgcc cgtgtcgcgc gcggccttga gcaccgcctg cgcgtcgagc ggcttcagcg
     2281 tgtggcagtc gatcacgcgc gcgtcgacgc ccttcttcgc caggagctcg gccgcgatca
     2341 gcgcctgcac cacgaggtcg cggttggcga cgatcgcgac atcccggccc tcgcgcaccg
     2401 tcacggcctt gccgatgcgg aacgggaagc tctcgtcgta gagcaccggc accgggtcgc
     2461 gcgtgaagct gaggtagacc ggcccctcgt aggccgcggc ggcgtgcacg gccatgcggg
     2521 tgctcgtcgg gtcggccggg gcgatcacgg tcgagccggc gagggcgcgc atgatggaga
     2581 gatcctcctg ggcctggtgg gtgaccccgt ccggcccggg ggtgatcccg ctgtggctgg
     2641 ccgcgatctt cacgttcagc cgcgggtagt ggatgctgtt gcgcacctgg tcgagcgccc
     2701 gcatgctcgc gaagaccgcg taagtgttgg cgaacgggat gaggcccgtc gtcgccatgc
     2761 cggccgcggc ggccatcatg ttctgctcgg cgatcccgaa gttgaaggat cgctcggggt
     2821 acttggcggc gaacatggtc gtcttcatgg acttggagac gtccgcgtcg agcgagacga
     2881 cctccgggtt cgacgcgccc agcgcgagca gcgcgtcggc ataggaaaag cgcgtgggct
     2941 cccccttggc cttggcgaag aggtctttgg accccagcag cgcctggatt tccggcaaca
     3001 cgtagcggta gttagatttc acaggtgcac ctcctgatct cgcacagcgc ctggtcggcc
     3061 tcggaggcgc agggcgcctt cccgtgccag tcggccacgt tttccatgaa ggagactccc
     3121 ttgcccttga ccgtttcggc aatgatggcg gtcgggatgc ccttgcgttc gtgcgccgcc
     3181 tcgagtgcgg ccacgacctg ctccatggag tgcccgtcga tcgtctcgac gtgccagttg
     3241 aaggcgcgcc acttgtcggc cagcggctcg accggcatct cgtcgtccac gcagtagtcg
     3301 ttctgcaggt ggttgcggtc gacgatcacc gtgaagttgt cgagcttcca cttgggcgcg
     3361 gccatggccg cctcccagac cgaaccctcc tgggactcgc cgtccccgac caccacccac
     3421 acgtggtagt ccttcttgcg cagcttgccg gcgagcgcca tccccaggcc
//
LOCUS       DATIKR010000060         2813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_85654, whole genome shotgun sequence.
ACCESSION   DATIKR010000060 DATIKR010000000
VERSION     DATIKR010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85654"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VLL76_00980"
     CDS             <1..374
                     /locus_tag="VLL76_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV28088.1"
                     /translation="VVKPGATLGDIGWAIQSFVEKHRFSVVRDFCGHGLGRVFHEPPN
                     VMHYGKPGQGVVLKEGMFFTVEPMINAGKYDTKILADGWTAVTKDKSLSAQFEHSVGV
                     TATGCEIFTASPKGLHCPPYE"
     gene            576..1715
                     /locus_tag="VLL76_00985"
     CDS             576..1715
                     /locus_tag="VLL76_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28089.1"
                     /translation="MVTGVHGIDSQTAIRRVNDTLQGPVVDILSQLVPDLKALPRAQA
                     FERTLDDIALLDRCFQAFRAQRDKFRTVLIDERKRPVEDDATALSCGRTLNDVVAMVV
                     RTAAKRYFRRKHGCAHKPLAPRLRQDIHDKGFAHRIKAIFADKPAEAPKTNKRADELY
                     DALKEYLLHDWQVKLVPTYASMSPTLVRSLGAKLLEVREIDHLKRILDDPAEAAKLFD
                     LPADAAAAVPMPARGLEGAAPTAQPPRRDERARLSDVLTTDGKHLRAEAFTAVLLRPE
                     VRSQLKAGDQMMCNTEILRSVGAVPAKLLVAELGLRLDQLAVFLLVTHDVLGKENFNR
                     MLGTPGNGEMVMRVTQKARLAGLTQQSGLSDVAGFVKQLFARFAA"
     gene            1820..>2813
                     /gene="ispG"
                     /locus_tag="VLL76_00990"
                     /gene_synonym="gcpE"
     CDS             1820..>2813
                     /gene="ispG"
                     /locus_tag="VLL76_00990"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HSV28090.1"
                     /translation="MSVRPYREIRRRKSRLIHVGNVPVGGDAPISVQTMTNTPTTDVA
                     ATVAQILRAEQAGVDIVRVSCPDEDSSRALKDIVRQVSVPVVADIHFHYKRAIEAAEA
                     GAACLRINPGNIGSPDRVREVVKAAKDHGCSMRIGVNAGSLEKHLLEKYGEPCPQAMV
                     ESALEHARILEDNDFFEFKISVKASDVFLAVAAYQGLAEACDYPLHLGITEAGGLIGG
                     TVKSAIGMGNLLWSGIGDTIRVSLSAPPEEEVRVGYEILKSLGLRTRGVNIVSCPSCA
                     RQGFDVVKTVETLEKRLAHVTAPVTLSIIGCVVNGPGEARETQIGVTGGGNDNHM"
BASE COUNT          511 a          950 c          912 g          440 t
ORIGIN      
        1 aggtcgtcaa gccgggcgcc accctgggcg acatcggctg ggccatccaa agcttcgtcg
       61 agaagcaccg tttctcggtg gtacgcgact tctgcggcca cgggctgggc cgcgtgttcc
      121 acgagccgcc aaacgtcatg cattacggca agcccggcca gggcgtggtg ctcaaggaag
      181 gcatgttctt cacggtcgag ccgatgatca acgccggcaa gtacgacacc aagatcctgg
      241 ccgacggctg gacggcggtg accaaggaca agtcgctgtc ggcccagttc gagcattcgg
      301 tcggcgtcac cgccaccggc tgcgagatct tcaccgccag ccccaagggc ctgcactgcc
      361 cgccctacga ataagttcct agtcgcgcac agtggtccga acgtcgtgaa ccccgccgaa
      421 aggcggggtt ttcgtcgttt ctacatacat ttcatctaca tattgacatt caactaaaaa
      481 tatcggccca atgtaaacgg attgtgacac agggttatat tctttttgac ataaaagccg
      541 ataaaatttg aggcatcttc tcgggagggg gagccatggt gacgggggtc catggaatcg
      601 acagccagac ggcgatccgc agggtgaacg acaccctgca ggggccggtg gtcgacatcc
      661 tttcgcaact cgtgccggac ctgaaggcgt tgcccagggc acaggcgttc gagcgcacgc
      721 tggacgacat cgccctgctg gaccgctgct tccaggcctt ccgcgcccag cgcgacaaat
      781 tccgcaccgt gctgatcgac gagcgcaagc gcccggtcga ggatgatgcc accgcgctgt
      841 cttgcggccg caccctcaac gacgtggtcg ccatggtggt gcgcaccgcc gccaagcgct
      901 atttccgccg caagcacggc tgcgcccaca agccgttggc gccgcgcctg cgccaggaca
      961 tccacgacaa gggcttcgcc caccgcatca aggccatctt cgccgacaag ccggccgagg
     1021 cgcccaagac caacaagcgc gccgacgaat tgtacgacgc gctgaaggaa tacctgctgc
     1081 atgactggca ggtgaagctg gtgccgacct atgccagcat gtcgcccacc ctggtgcggt
     1141 cgctgggggc caagctgctg gaggtgcgcg agatcgacca tctcaagcgc atcctcgacg
     1201 atccggccga ggccgccaag ctgttcgacc tgccggccga tgccgccgcc gccgtgccga
     1261 tgccggcgcg cggcctggaa ggtgcggcgc ccaccgccca gccgccgcgc cgcgacgagc
     1321 gcgcccgcct gtccgacgtg ctgaccaccg acggcaagca cctgcgcgcc gaggccttca
     1381 ccgccgtgct gctgcgcccc gaagtgcggt cgcagttgaa ggccggcgac cagatgatgt
     1441 gcaacacgga aatcctgcgc agcgtcggcg cggtgccggc caagctgctg gtggccgaac
     1501 tgggcctccg gctcgaccag ttggcggtgt tcctgctggt gacgcatgac gtcctgggca
     1561 aggagaattt caaccgcatg ctcggcaccc ccggcaacgg cgagatggtc atgcgggtga
     1621 cgcaaaaggc ccgcctggcc ggcctgaccc agcaaagcgg cctgtccgac gtcgccggtt
     1681 tcgtgaagca attgttcgcg cgcttcgcgg catagggcac tcttcgggcc accttgaggg
     1741 cgaagccgcc gcccaaggtg acagcgcttc ctgaaatgcg ctatatcaac cgcccgaccc
     1801 attgcccgcc cggaaaccca tgtccgtccg cccctatcgc gagatccgcc gcagaaagtc
     1861 gcgcctgatc catgtcggca acgtgccggt ggggggcgac gcgccgattt cggtgcagac
     1921 gatgaccaac acgccgacca ccgacgtcgc cgcgacggtg gcgcagatcc tccgggccga
     1981 gcaggcgggc gtcgacatcg tgcgggtgtc gtgccccgac gaggattcct cgcgggcgct
     2041 caaggacatc gtcaggcagg tgtcggtgcc ggtggtggcc gacatccact tccactacaa
     2101 gcgcgccatc gaggcggccg aggccggcgc cgcctgcctg cgcatcaatc cgggcaacat
     2161 cggctcgccc gaccgcgtgc gcgaggtggt caaggcggcc aaggaccacg gctgttccat
     2221 gcgcatcggc gtcaacgccg gctcgctgga aaagcacctg ctggagaagt acggcgagcc
     2281 gtgcccccag gccatggtgg aaagcgcgct ggaacacgcc aggatcctcg aggacaacga
     2341 cttcttcgag ttcaagatca gcgtcaaggc gtcggacgtg tttctggccg tggccgccta
     2401 tcagggcctg gccgaggcct gcgactaccc gctgcatctc ggcatcaccg aggccggcgg
     2461 cctgatcggc ggcacggtga aatccgccat cggcatgggc aatttgctgt ggtcgggcat
     2521 cggcgacacc atccgggtgt cgctgtcggc gccgcccgag gaagaggtcc gcgtcggcta
     2581 cgagatcctg aaaagccttg gcctgcgcac gcgcggcgtc aacatcgtgt cctgcccgtc
     2641 ctgcgcgcgg cagggcttcg acgtggtcaa gacggtcgag acgctggaaa agcggctggc
     2701 ccacgtcacc gcgccggtga cgctgtcgat catcggctgc gtcgtcaacg gccccggcga
     2761 ggcgcgcgag acgcagatcg gcgtgaccgg cggcggcaac gacaatcaca tgg
//
LOCUS       DATIKR010000061         2234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_218842, whole genome shotgun sequence.
ACCESSION   DATIKR010000061 DATIKR010000000
VERSION     DATIKR010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218842"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VLL76_00995"
     CDS             <1..517
                     /locus_tag="VLL76_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HSV28091.1"
                     /translation="YVDDDIDIGNGRYLMEPLVLARLLQGAAIKPTDVVLNIGDATGY
                     TTAVISKLAQTVVALEADGEWAGRATACLTELAIDNAAVVQGSLVQGYPAQAPYDVIV
                     FSGSVGEIPAAISRQLVDGGRLVAVVRPGRGAGTGTLVVRAGDTFGRRPLFDACTPAL
                     PGFEARQAFVF"
     gene            808..2226
                     /locus_tag="VLL76_01000"
     CDS             808..2226
                     /locus_tag="VLL76_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HSV28092.1"
                     /translation="MRKACLLAGVALVGLGVMVGPEARAETLEEVLATTYNTNPTLQA
                     RRARVRASDENVPQALSNWRPTVRFVGEAARGRYESNNSGNPPAYYDRETGRTGKSGT
                     LTLSQPLYRGGRTVAETRQAEASVLSERAGLQATEQTQLLAAATAFLNVVRDEAVLKL
                     NINNEQVLRRQREAAEERFRVGEITRTDVSQAEARLARAIADRVQAEGVLQNSRANFI
                     NVVGRAPESPEPPKAAVTVPADLGEVKATTLAKNPNVLTSEWTAQAAKEGIDLVAGEL
                     LPTVSLNGEYQRLLSTTVRGGETEAMEATLQVSVPLYEAGDAYSRLRAQKHTYGQRRI
                     EADQARRDAIEAATQSWEDLQSARARIKSFEAQIRASEMALAGVEEEAKVGSRTVLDV
                     LDAEQELFDARVSLVRAQRDEMVAAFELKSALGDMTAQGLNLPVAVYDPVEHYEDVRG
                     KWIGTGIDPQPGYEDYAPAKSE"
BASE COUNT          367 a          784 c          746 g          337 t
ORIGIN      
        1 ctatgtggac gacgacatcg acatcggcaa cggccgctac ctgatggagc cgctggtgct
       61 ggcccgcctg ctgcagggcg ccgccatcaa gccgaccgac gtggtgctga acatcggcga
      121 cgccaccggc tacaccaccg ccgtgatctc gaagctggcc cagaccgtgg tggcgctcga
      181 ggccgacggc gaatgggccg gccgcgccac cgcctgcctg accgaactgg ccatcgacaa
      241 cgccgccgtg gtgcagggaa gcctggttca gggctatccc gcccaggcgc cctatgacgt
      301 gatcgtgttc tcgggttcgg tcggcgagat ccccgccgcc atctcccgcc agttggtcga
      361 tggcggccgc ctggtggcgg tggtgcgccc cggccgcggc gccgggaccg gcaccctggt
      421 ggtgcgggcc ggcgacacct tcggccgtcg gccgctgttc gacgcctgca cgccggcgct
      481 tcccggcttc gaggcccggc aagcgtttgt cttctaattg atccactctc gaaaggcata
      541 gtcgtcttcg acaaagtctt aagagatcgt aaatactccg tcagtccggc cgggcctcgc
      601 cgcccggcct ttcgtttgtc catcccgccc ctccgccttg gttattggcc gtcccgatgg
      661 gcgtatggcg atccgtgcgg gcaaggaaca ttcgctccgg cgcgtcaagc aatatttctt
      721 gatctttcgt cgaagcaagt tattgttcgt taggagtctt tcgccgcgca ggatcagggg
      781 cggtcgaaca ttgctggaag gtgcggaatg aggaaagcgt gtttgttggc cggtgtggcg
      841 cttgtcggcc tgggggtcat ggtcggcccc gaggcgcgtg ccgagaccct cgaggaggtc
      901 ctggccacca cctacaacac taatcccacg ctgcaggccc gccgcgctcg cgtgcgcgcc
      961 agcgacgaaa acgtgcccca ggcgctgtcc aactggcgcc cgaccgtgcg cttcgtgggc
     1021 gaggccgcgc gtggccgcta tgaatccaac aacagcggca atccgccggc ctattacgac
     1081 cgcgagaccg gccgtaccgg caagagcggc accctgaccc tgtcgcagcc gctgtatcgc
     1141 ggcggccgca ccgtcgccga gacccggcag gccgaagcca gcgtgctgtc cgagcgcgcc
     1201 ggcctgcagg cgaccgagca gacccaactg ctggccgccg ccaccgcctt cctcaatgtc
     1261 gtgcgcgacg aggcggtgct gaagctcaac atcaacaacg agcaggtgct gcgccgccag
     1321 cgcgaggccg ccgaagagcg cttccgcgtc ggcgagatca cccgcaccga cgtcagccag
     1381 gccgaggccc gcctggcccg cgccatcgcc gaccgcgtcc aggccgaagg cgtgctgcag
     1441 aactcgcgtg ccaatttcat caacgtggtc ggccgcgccc ccgaaagccc cgagccgccg
     1501 aaggccgccg tgacggtccc cgccgacctg ggcgaggtca aggccaccac cctggccaag
     1561 aaccccaacg tgctgacctc ggaatggacc gcccaggcgg ccaaggaagg catcgatctg
     1621 gtggccggcg aattgctgcc gaccgtgtcc ctgaacggcg agtaccagcg cctgctgtcc
     1681 accaccgtcc gcggtggcga gaccgaggcg atggaggcga cgctgcaggt cagcgtgccg
     1741 ctgtacgagg ccggcgacgc gtattcgcgt ctgcgcgccc agaagcacac ctacggccag
     1801 cgccgcatcg aggccgacca ggcccgccgc gacgcgatcg aggccgccac gcaatcgtgg
     1861 gaggacttgc agtcggcccg cgcccgcatc aagtcgttcg aagcgcagat ccgcgccagc
     1921 gaaatggccc tggctggcgt cgaggaggaa gccaaggtcg gctcgcgcac cgtgctcgac
     1981 gtgctcgacg ccgagcagga attgttcgac gcccgcgtca gcctagtccg cgcccagcgc
     2041 gacgagatgg ttgccgcgtt cgagctgaag tccgcgctgg gcgacatgac cgcccagggg
     2101 ctcaatctgc cggtcgcggt ctatgacccg gtcgagcatt acgaggacgt gcgcggcaag
     2161 tggatcggca ccggcatcga cccgcagccg ggttacgagg actacgcgcc ggcgaagtcc
     2221 gaatagttgg gggg
//
LOCUS       DATIKR010000062         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_146357, whole genome shotgun sequence.
ACCESSION   DATIKR010000062 DATIKR010000000
VERSION     DATIKR010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146357"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VLL76_01005"
     CDS             complement(<1..720)
                     /locus_tag="VLL76_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSV28093.1"
                     /translation="MSADYKTTVFLPKTDFPMKAGLPEREPELLARWQRIGLFERLRE
                     EGKGREKFVLHDGPPYANGHLHIGHALNKILKDVIVRTQSMQGKDAAYVPGWDCHGLP
                     IEWKIEEKYREAGKDKDQVDIVQFREECRQFARSWIDVQREEFKRLGVTGDWAKPYTT
                     MTNKAEATIARELGKFLLDGSLYKGVKPVMWSVVEKTALAEAEVEYHDHTSVTIWVKF
                     PVVKAGTPEIEGANVVIWTTTP"
     gene            complement(728..1714)
                     /locus_tag="VLL76_01010"
     CDS             complement(728..1714)
                     /locus_tag="VLL76_01010"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HSV28094.1"
                     /translation="MRLIRHCGELTPDLQGCVVALGNFDGVHKGHQSVILTARSIAEQ
                     LGAPHAVMTFEPHPRSHFKPDQPPFRLTPFREKARLIEALGIDLLYMQHFDGAFAQMT
                     AIEFVGDILVGCLKAKHVVVGYDYVFGKGRQGTGALLQKLSDEGAFGFTSVPPEIAPS
                     GEVYSSTRVREYLVAGKPAEAAKLLGHFWEIEGRVEHGDARGRTIGFPTANLHLGEYQ
                     RPATGVYAVRAGIDHGGQTVWHDGVANFGRRPTFDKTDELLEVHLIGHAEDLYGRHLR
                     VALVEFIRPELKFASVDDLKTRITADVEAARVLLAARHFPDNPGPLVPSSEQ"
     gene            complement(1799..>2021)
                     /locus_tag="VLL76_01015"
     CDS             complement(1799..>2021)
                     /locus_tag="VLL76_01015"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HSV28095.1"
                     /translation="TQGADFVRKYLQYVIGDLEGDIRLYKRATESDSGEIRQFAQNTL
                     PVLESNLAKARQVWEQQVAEEPAPAIETR"
BASE COUNT          318 a          635 c          689 g          379 t
ORIGIN      
        1 cggcgtggtg gtccagatca ccacgttggc gccctcgatc tcgggggtgc cggccttgac
       61 caccgggaac ttgacccaga tggtaacgct ggtgtggtcg tggtactcga cctcggcctc
      121 ggccagggcg gtcttttcca ccaccgacca catcaccggc ttgaccccct tgtagagcga
      181 gccgtcgagc aggaacttgc ccagctcgcg ggcgatggtc gcctcggcct tgttggtcat
      241 ggtggtgtag ggcttggccc agtcgccggt cacgcccagg cgcttgaact cctcgcgctg
      301 gacgtcgatc cacgagcgag cgaactggcg gcattcctcg cggaactgga caatgtcgac
      361 ctggtccttg tccttgccgg cctcgcgata cttttcctcg atcttccatt cgatgggcag
      421 gccgtggcag tcccagccgg ggacataggc ggcatccttg ccctgcatgg actgggtgcg
      481 gacgatcacg tccttgagga ttttgttgag cgcgtggccg atgtggaggt ggccgttggc
      541 atagggcggg ccgtcatgca gcacgaactt ctcgcgcccc ttgccttctt cgcgcaggcg
      601 ctcgaacagg ccgatccgct gccaccgcgc cagcagctcg ggctcccgtt cgggcaggcc
      661 ggccttcatg gggaagtcgg tcttgggcag gaagacggtc gtcttgtaat cggcactcat
      721 cgcaggctca ctgttcggaa gacggcacca gggggccggg attgtcgggg aaatgacgtg
      781 cggccagcaa cacgcgggcg gcctcgacgt cggcggtaat tcgggtcttg aggtcgtcga
      841 ccgaggcgaa tttcagctcg ggccggatga attccaccag ggcgacccgc agatgccggc
      901 cgtacaggtc ctcggcatgg ccgatcagat gaacttccag cagctcgtcg gtcttgtcga
      961 aggtggggcg gcggccgaaa ttcgccaccc cgtcatgcca cacggtctgg ccgccatggt
     1021 cgatgccggc gcgcacggca tagacgccgg tggcgggccg ctggtattcg cccagatgca
     1081 ggttggcggt ggggaagccg atggtgcggc cgcgtgcgtc gccgtgctcg acgcggccct
     1141 cgatctccca gaaatggccc agcagcttgg ccgcctcggc cggcttgccc gccaccaggt
     1201 attcccgcac cctggtcgag gaatagacct cccccgacgg cgcgatctcg ggcggcaccg
     1261 aggtgaagcc gaaggcgccc tcgtccgaca gcttctgcag cagggcgccg gtgccctggc
     1321 ggcccttgcc gaacacgtag tcgtagccga ccaccacatg cttggccttg aggcagccga
     1381 ccaggatgtc gccgacgaac tcgatggcgg tcatctgggc gaaggcgccg tcgaaatgct
     1441 gcatgtagag caggtcgatg cccaacgcct cgatcagccg ggccttctcg cggaacgggg
     1501 tcaggcgaaa gggcggctgg tcgggcttga aatggctgcg cggatgcggc tcgaacgtca
     1561 tcaccgcatg gggcgcgcca agctgttcgg cgatacttct cgcggtcagg atcaccgatt
     1621 ggtggccctt gtggacgcca tcgaaattgc caagcgccac cacgcacccc tgcagatcgg
     1681 gggtcagctc gccgcaatgt cggatcaagc gcatgggtta cgggctttcc ggcctgaaaa
     1741 acgtggacgg taaggggtaa tccatggcgg gcggaagcgc aaggctgcag gcttgcggct
     1801 aacgcgtctc gatggccggc gccggttcct cggccacctg ttgttcccac acctggcgtg
     1861 ccttggccag gttggattca agaaccggca gggtgttttg cgcgaattgg cggatttcgc
     1921 cgctgtctga ttcggtggcg cgcttgtaca ggcggatgtc gccttccagg tcgccgatca
     1981 cgtattgcag gtatttgcgc acgaagtcgg cgccctgggt c
//
LOCUS       DATIKR010000063         2798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_218859, whole genome shotgun sequence.
ACCESSION   DATIKR010000063 DATIKR010000000
VERSION     DATIKR010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218859"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VLL76_01020"
     CDS             complement(<1..425)
                     /locus_tag="VLL76_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSV28096.1"
                     /translation="MTSHILRRPLVAALALIMVGFAQTAAAEPIETSAKQAIIVDFNT
                     GSVLLEKNSDTLMVPSSMSKLMTAYMVFEKLKEGSWKMDDMLPVSETAWKRHYKSGGS
                     LMFLPVNSSAKVGDLIRGVIIQSGNDACSVLAEAHSGSE"
     gene            complement(519..1457)
                     /locus_tag="VLL76_01025"
     CDS             complement(519..1457)
                     /locus_tag="VLL76_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSV28097.1"
                     /translation="MAALLASTALLSGCAEANLFGHFAKKATEDAPPVSSTMAPTYKI
                     GKPYQVKGVWYYPAEDWDYDETGIASWYGSDFHNKPTANGETFDMNAVTAAHKTLPMP
                     SMVRVTNLENGRSLIVRVNDRGPFVNNRVIDLSRRSAQLLGMEGQGTAKVRVQILSEE
                     SRALAGKLKQDVPGGAPQLAAAPRESVKAETLPPAGSKEAPRPVVTASAVNGRTAMTA
                     QAAEQKLAAQQVDVVPVGQTGIFIQAGSFSRYDNAQRLSARLSGVGKFAVQQAAVKGQ
                     TVYRVRLGPMQTVDEADRLLDQVISTGHQDAKVIVD"
     gene            complement(1527..2507)
                     /locus_tag="VLL76_01030"
     CDS             complement(1527..2507)
                     /locus_tag="VLL76_01030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HSV28098.1"
                     /translation="MALKAILLAGATALVLAAPVSAQQAPAQDFATFLDGVRAEAAGK
                     GIKPDTLDSALTGIEHIDRVIELDRKQPEFTLTFEQYLTRVVSPTKIEKGRRMMAENK
                     AVLAEIEKRYGVQPRFVVALWGIETDYGRVTGGFSVVSALATLAYDGRRSNYFRGELM
                     NALTILDQGHISPAEMKGSWAGAMGQCQFMPSSFLKFAQDWNGDGRTDIWTTRGDVLA
                     SAANYLSTEGWKGDQTWGRAVKLPDGFDPKLIGADTRKSLKDWAKLGVRSRNGKPLPA
                     LDLEGSVVLGESGKGPAFIVYDNFRTIMKWNRSTYFALAVGHLADKLAAR"
     gene            complement(2588..>2798)
                     /locus_tag="VLL76_01035"
     CDS             complement(2588..>2798)
                     /locus_tag="VLL76_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSV28099.1"
                     /translation="VFRADGWRVLPYPVDYLTTGRRDGRVMPGLDLTAGLRVMGIALH
                     EWLGLAYYRLRGWTDALVPAPDGAL"
BASE COUNT          450 a          940 c          925 g          483 t
ORIGIN      
        1 tcctcgctgc cggaatgggc ctcggccagc accgaacagg cgtcgttgcc cgactggatg
       61 atgacgccac ggatcaggtc gccgaccttg gcgctggaat tgaccggcag gaacatcagc
      121 gagccgccgg acttgtaatg gcgcttccag gccgtttccg acaccggcag catgtcgtcc
      181 atcttccagc tgccttcctt gagcttctcg aacaccatat aggcggtcat cagcttgctc
      241 atggacgacg gcaccatcag cgtgtcggag ttcttctcca gcagcaccga accggtgttg
      301 aagtcgacga tgatggcctg cttggccgag gtctcgatcg gctcggcggc ggcggtctgg
      361 gcaaagccca ccatgatcag cgcgagggcc gcgaccagcg gccggcggag gatgtgcgac
      421 gtcatcggaa ctgtggatcc tcgaacagcg atatgtgtat ggaaaccctt tgtccctagc
      481 cccgaaatgc gacggaacta gggcagcggg gttctaggtc aatcgacgat aaccttggcg
      541 tcctgatggc cggtggagat cacctggtcg agcaggcggt cggcctcgtc cacggtctgc
      601 attggcccca ggcggacgcg atagaccgtc tggcctttca ccgccgcctg ctgcaccgcg
      661 aacttgccga cccccgacag ccgcgccgac agccgctggg cgttgtcgta gcggctgaac
      721 gagccggcct ggatgaagat gccggtctgg cccaccggca ccacatcgac ctgctgcgcc
      781 gccagcttct gctcggccgc ctgggcggtc atggcggtgc gcccgttgac ggcggatgcg
      841 gtcaccaccg ggcgcggcgc ctccttgctg ccggccggcg gcagggtctc ggccttgacg
      901 ctctcgcgcg gggctgcggc cagttgcggc gcgccgccgg gcacgtcctg cttcaacttg
      961 ccggccaggg cacggctttc ctcggacagg atctggacgc ggaccttggc ggtgccctgc
     1021 ccctccatgc ccagcaactg ggccgaacgg cgcgacaggt cgatgacgcg gttgttgacg
     1081 aacgggccgc ggtcgttgac gcgcacgatc agcgagcggc cgttctcaag gttggtcacc
     1141 cgcaccatgc tcggcatggg cagggtcttg tgggccgcgg tgacggcgtt catgtcgaac
     1201 gtctcgccgt tggcggtggg cttgttgtgg aagtcgctgc cataccacga ggcgatgccg
     1261 gtctcgtcgt agtcccaatc ctcggccgga tagtaccaca cgcccttgac ctggtacggc
     1321 ttgccgatct tgtaggtggg cgccatggtc gacgacaccg gcggggcgtc ctcggtcgct
     1381 ttcttggcga aatggccgaa cagattggcc tcggcgcagc ccgacagcag cgcggttgac
     1441 gccaacaacg cggccacgcg caccccccgc ggagccctgc gcatcatgta gtgtccccct
     1501 cggtcctacg ccaaagatgt ggtagtctaa cgggcggcga gcttatccgc aagatggccg
     1561 acggcaaggg cgaaataggt cgaacggttc cacttcatga tggtgcggaa attgtcgtag
     1621 acgatgaagg cgggaccctt gccgctttcg cccagcacca ccgagccttc gaggtccagc
     1681 gccggcagcg gcttgccgtt gcgcgagcgc acccccagct tggcccaatc cttgaggctc
     1741 ttgcgggtgt cggcgccgat cagcttgggg tcgaagccgt cgggcagctt gacggcgcgg
     1801 ccccaggtct ggtcgccctt ccagccttcg gtcgacaggt agttggcggc cgaggccagc
     1861 acgtcgccgc gcgtggtcca gatgtcggtg cggccgtcgc cgttccagtc ctgggcgaat
     1921 ttcaggaagg acgacggcat gaactggcat tgccccatgg cgccggccca cgatcccttc
     1981 atctcggccg gcgagatgtg gccctgatcc aggatggtca gcgcgttcat caattcgccg
     2041 cggaaataat tggagcggcg gccgtcatag gccagcgtcg ccagcgccga caccaccgag
     2101 aagccgccgg tgacgcggcc gtaatcggtc tcgatgcccc acagcgccac cacgaagcgg
     2161 ggctgcacgc cgtagcgctt ctcgatctcg gccagcaccg ccttgttctc ggccatcatg
     2221 cgacggccct tttcgatctt ggtgggcgac accacgcggg tcaggtattg ctcgaaggtc
     2281 agggtgaatt cgggctgctt gcggtccagc tcgatcaccc ggtcgatgtg ctcgatgccg
     2341 gtcagggcgg agtccagcgt gtcgggcttg atccccttgc ccgccgcctc ggcgcgcacg
     2401 ccgtccagga aggtggcgaa atcctgcgcc ggggcttgct gggccgacac cggggcggcc
     2461 aggaccaacg cggtggctcc cgccagcaaa atcgccttca acgccatcgc ttgtactcct
     2521 gttgccccgg aacccgcacc ccttgtgcca catccgcaca agccgccgca acggcggcga
     2581 aggattgtca caacgcgccg tccggcgcgg ggaccagggc gtcggtccag ccgcgcagcc
     2641 ggtaataggc caggcccagc cattcatgca gggcaatccc catcacccta agtccagccg
     2701 tgaggtcgag accgggcatg acccggccat cgcggcggcc ggtggtcaga tagtcgaccg
     2761 ggtaaggcag cacccgccag ccgtcggcgc gaaacacc
//
LOCUS       DATIKR010000064         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_194515, whole genome shotgun sequence.
ACCESSION   DATIKR010000064 DATIKR010000000
VERSION     DATIKR010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194515"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..347
                     /locus_tag="VLL76_01040"
     CDS             129..347
                     /locus_tag="VLL76_01040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28100.1"
                     /translation="MAEARSQAAWEHTSALLAFLAEPHRDRRRRGRPYRPSDFNPHLR
                     RDIVITKANSHLLAQAFGETENGGSGKR"
     gene            334..>2049
                     /locus_tag="VLL76_01045"
     CDS             334..>2049
                     /locus_tag="VLL76_01045"
                     /inference="COORDINATES: protein motif:HMM:TIGR01760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HSV28101.1"
                     /translation="MASGRAIKAGQAYVELFADNTKLVRGLNAAQGRIAAFGSAIQGI
                     GMRMTAMAAAVAAPAAISLKTFAEFEDEMARVRAVTGATDAEFQSLYETAKRLGATTT
                     FSAVQVAQGVRALGSAGLEAHEILAAIPSTLHLARVGVMEIGEAANIVEDVGSAFGLA
                     ADQVGRIVDTLATTQARGNAAAREMSQGLRSVAPIATTAGQSLEMVAAAIDVLADRGV
                     DAASAGTDLARILTNLATPDVQQALEGMGVATVDAAGGMRSLGAVMADLGRATAAMPD
                     SRQLDLFDAMFGRSRRSAIVLAQHAGALAHLHGALLAASGAGATMAAIMENTLGGSMR
                     ALLSALQAVQIAFGEALVDDIRKAVGGLTGFARQVANLVAANRDVVVSFARWAAAFGL
                     IGVGLVTVGLALHTAAAGIGGVLIPAQLLAGLLATMAGLFAALLSPVGLVAVAVAGVG
                     GALTDLSRLGGTVLTWLTQRFKDLSTAAVQAFEGIADALAAGDITLAVRVLWAGIKAE
                     FAGGTNWLLVQWADVRAGVLKILEGTIQGALAAWESMVHGFAVAWIEGVAILKRVWAH
                     FAGWHQ"
BASE COUNT          301 a          656 c          755 g          337 t
ORIGIN      
        1 aaggtggccc ggacggacgt gcaggcggcc gtgcaggcgg cgttcgcagc ctctggcgag
       61 ctgtctacgg gctcgccggg atcgtaggcg tcgatccagg accctacagc ctgcgggaac
      121 tggcgtggat ggccgaggcc aggagccagg ccgcctggga acatacgtcg gccctgctgg
      181 ccttcctggc cgagccgcac cgcgaccgca ggcgccgggg ccggccctat cggccgtcag
      241 acttcaaccc gcacctgcgc agggacatcg tgatcaccaa ggccaacagc catctgctgg
      301 cccaggcgtt cggcgagacg gagaacggcg gcagtggcaa gcggtagggc aatcaaggcc
      361 ggacaggcct acgtcgagct ctttgccgac aacaccaagc tggtgcgagg cctcaacgcc
      421 gcacagggac gcatcgccgc gttcggctcg gcgatccagg gcatcggcat gcggatgacc
      481 gcgatggccg cggccgttgc ggcgcccgcg gcgatcagcc tcaagacctt cgccgagttc
      541 gaggatgaga tggcccgcgt ccgcgccgtc accggggcta ccgacgccga gttccagtcg
      601 ctatacgaga ccgccaagcg tctcggcgca acaactacgt tctcggccgt gcaagttgcc
      661 cagggcgtta gggccctggg ctcggccggg ctcgaagccc atgaaatact ggctgctatc
      721 ccctccacac tgcacctggc cagggtaggg gtgatggaaa tcggcgaggc cgccaacatc
      781 gtcgaagatg ttgggtcagc cttcggcctg gcggccgacc aagtgggccg cattgtggac
      841 acattggcga ccacgcaggc gcgcggcaat gcggcagcca gggaaatgag tcagggtttg
      901 cgatctgtgg cgccgatcgc tactacagcc gggcaatcgc tcgagatggt agcagcggcc
      961 atcgatgtgc tggccgaccg tggggtcgat gcggcgtctg ccggcaccga cttggcccgc
     1021 atcttgacca atctcgccac tcccgacgtc cagcaggcat tggaaggcat gggcgtggcg
     1081 actgttgatg ccgccggagg catgcgatcg ttgggcgcag tcatggccga tttgggtcgc
     1141 gccacggcgg ccatgcccga ttctcgacag ttggacctgt tcgacgcaat gttcggtcgc
     1201 tccaggcggt ccgccattgt cttggcgcag cacgccggcg cattggccca cctacacggc
     1261 gcgttgctgg ccgcatccgg cgccggcgcc acgatggcgg cgatcatgga gaacaccttg
     1321 ggcgggtcga tgcgggccct gctgtcggcc cttcaggcgg tccagatcgc cttcggcgag
     1381 gcgctggtag atgacatccg caaggcggtc ggcgggctga ccggctttgc ccggcaggtg
     1441 gccaacctgg tggcggcgaa ccgggacgtg gtggtctcgt tcgcccgctg ggcggcggcc
     1501 ttcgggctga tcggggtcgg gctggtgacg gtcgggctgg cgctgcacac ggcggccgcg
     1561 gggatcggcg gggtgctgat cccggcccag ctcctggcgg gcctcctggc gaccatggcg
     1621 ggactgttcg cggcactgct ctcgccggtc gggctggtgg ccgtggccgt cgcgggcgtc
     1681 ggaggggccc tgacggacct ctcccggctg ggcgggaccg tgctgacctg gctgacccag
     1741 cgattcaagg atctgtctac tgcggccgtt caggccttcg aggggatcgc agatgccctg
     1801 gctgccggcg atatcacctt ggccgtccgt gtgctgtggg cggggatcaa ggccgagttc
     1861 gccggcggga cgaactggct gctggtccag tgggctgacg tgcgggccgg cgtcctgaag
     1921 atcctggaag ggacgattca gggggcgctg gcggcctggg agtcgatggt ccacggcttt
     1981 gccgtcgcct ggatcgaagg ggtcgccatt ctcaagcggg tctgggcgca ctttgccggc
     2041 tggcaccag
//
LOCUS       DATIKR010000065         4242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_182365, whole genome shotgun sequence.
ACCESSION   DATIKR010000065 DATIKR010000000
VERSION     DATIKR010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4242
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182365"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VLL76_01050"
     CDS             <1..387
                     /locus_tag="VLL76_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HSV28102.1"
                     /translation="TISEGRVLLTGVLPSEASRADAVRLAWQAAGVKEVINEVAVKPA
                     GTDVIDDGRDVVISQTLKTRLLFDKEIKNINYAIEVVDGIVYLMGIAQNETELERVIA
                     HARDISHVKRVVSHVRLKNDPRRHQG"
     gene            402..1229
                     /locus_tag="VLL76_01055"
     CDS             402..1229
                     /locus_tag="VLL76_01055"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HSV28103.1"
                     /translation="MPKSPGDHRDRLAALGGAGDDAVGLGETGFLLAGLCRPQARVAD
                     YLDYRDGLAAELAPAPSDAAGRAATLAELMAGRQRFRGDDCDDEQVANANLMWVVDHR
                     QGVRSALAILYLDVARAAGWRADGLNLPGALLVRLEDGAGQRVILDPFERGRIVGAPD
                     LRALVKSSSGSAAELEPAYFTPAGNRDMLVRLQNDIKLRLLRRGLVERALAVVEAVLL
                     FAPGQAQLWRECGLMQLRLGDPRAAAASLEQFVARTANPGARRRTLQLLQDIRLRLL"
     gene            1396..2361
                     /gene="gshB"
                     /locus_tag="VLL76_01060"
     CDS             1396..2361
                     /gene="gshB"
                     /locus_tag="VLL76_01060"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HSV28104.1"
                     /translation="MSLAVAIQMDPIETIDINTDSTFALALEAQRRGHALFHYLPQHL
                     ALKNGRVSAWVRPLQVQREKGNHASLGDATLVDLATMDVVLMRQDPPFDMAYITATHL
                     LEHIHPKTLVVNDPFHVRNAPEKLMVTHFEGLMPPTLITADRRQILEFREEYQDIVLK
                     PLFGNGGAGVFHVKPDDENLNSLLEMFTQLYREPVIVQRYLPEVREGDKRIILVDGRP
                     AGAVNRVPMAGEARSNLHVGGRAMKAELTTRDREICDAIGPTLADRGLIFVGIDVIGG
                     YLTEINVTSPTGIQEIDRFDDIRIESQIWDAIELRRASTAQVPSA"
     gene            complement(2569..4086)
                     /locus_tag="VLL76_01065"
     CDS             complement(2569..4086)
                     /locus_tag="VLL76_01065"
                     /inference="COORDINATES: protein motif:HMM:NF023273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28105.1"
                     /translation="MNLVGRRSEIGSVAFWAGLVALSLAHNLDLLETQAREVALARAR
                     MLFSVVETTRLWNAGHGGVYAPAGKDTPPNPYLDDSERDVVINGREYTKVNPAYMTRQ
                     ISELVESQNGAAFRLTSLNPIRPGNAPDPWEAEALKRFEHGDAAEVLEHGVYRDRPAF
                     RYMALLRVKEPCLACHAKQGYRVGDIRGGISVSIPAADVLGEIAPQRRQTIVMHLAGF
                     LLLSGASLVFFGRLRASWAALAEAKAAQERMVAERTAELSAANAELARSNAELENFAY
                     IASHDLQEPLRMMGSYAQLIGRRYGDRLDGDGREFLGYMSEGAGRMKAMIDDLLAYSR
                     VDRGEPSFARVETRLAVDAALANLAAALSESGAKVELPADLPAVMGEMPLLVRLFQNL
                     IGNAVKYRRADAAPVVQVRADRDGAFATFAIEDNGIGIPEDARERVFLIFQRLHNRAA
                     YPGTGIGLAIAKKIVERHGGRIWVEAAPGGGSVFRFTLRVAKDGDVSASEQGGGV"
BASE COUNT          700 a         1434 c         1437 g          671 t
ORIGIN      
        1 accatcagcg agggccgggt gctgctgacc ggcgtgctgc ccagcgaagc gtcgcgcgcc
       61 gacgccgtgc ggctggcctg gcaggccgcc ggcgtcaagg aggtgatcaa cgaggtcgcc
      121 gtcaagccgg ccggcaccga cgtgatcgat gacggccgcg acgtggtgat ctcgcagacc
      181 ctgaagacgc gactgctgtt cgacaaggaa atcaagaaca tcaactacgc catcgaggtt
      241 gtggacggga tcgtctacct gatgggcatc gcgcaaaacg agaccgagct ggaacgggtc
      301 attgcccacg cccgcgacat ttcccacgtc aagcgggtcg tcagccatgt ccggctgaag
      361 aacgatccgc gccgccacca gggttagggc cagggacagg aatgccgaaa tcgccgggag
      421 accaccgcga ccgccttgcc gccctgggcg gtgccgggga cgacgcggtg ggcctgggcg
      481 agaccgggtt cctgctggcc gggctgtgcc ggccgcaggc ccgggtggcc gactatctgg
      541 attaccgcga cggcctggcg gcggaactgg ccccggcgcc gtccgacgcc gccggccggg
      601 ccgccacctt ggccgagctg atggccggcc gccagcgctt tcgcggcgac gattgcgacg
      661 acgaacaggt cgccaacgcc aatctgatgt gggtggttga ccatcgccag ggtgtccgct
      721 cggccctggc gatcctctat ctcgacgtcg cccgcgccgc cggctggcgc gccgacggcc
      781 tcaacctccc cggcgccctg ctggtgcggc tcgaggacgg ggccggccag cgtgtcatcc
      841 tggacccgtt cgagcgtggt cgaattgtcg gagcgcccga cctgcgggcg ctggtcaagt
      901 cgtcgtcggg ttcggccgcc gagttggaac ctgcgtattt caccccggcc ggcaaccgcg
      961 atatgctggt ccggctgcag aacgacatca agctgcggct gttgcgccgg ggcctggtgg
     1021 agcgggcgtt ggccgtggtc gaagcggtgc tgctgttcgc ccccggccag gcccagctgt
     1081 ggcgggaatg cgggttgatg cagctgcgcc ttggagaccc cagggccgcc gccgcctcgc
     1141 tggagcaatt cgtggcgcgc accgccaatc cgggcgcccg ccggcggacc ctgcaattgc
     1201 tgcaggacat ccgcctgcgc ctgttgtgag ttatatcgaa acccgatgag cggacctcac
     1261 cgggtttcgg ctaggcccaa ggggccgcgc ggctcgtgcc gcgggaggca aggggcgcgg
     1321 aggcgccccg cccgccgcat gagggcgccg gtgatcggtt ccgatcaccg gtatctggta
     1381 ttaacggagg acaaggtgag cctggccgtc gccatccaga tggatcccat cgagaccatc
     1441 gacatcaaca ccgattccac cttcgccctg gcgctggagg cgcagcggcg cggccatgcc
     1501 ctgttccact acctgccgca gcatctggcg ctgaagaacg gccgggtgtc ggcctgggtg
     1561 cggccactgc aggtccagcg cgagaagggc aaccacgcca gcctgggcga tgccaccttg
     1621 gtggatctgg cgaccatgga cgtggtgctg atgcgccagg acccgccgtt cgacatggcc
     1681 tacatcaccg ccacccacct gctggagcac atccacccca agacgctggt ggtgaacgat
     1741 cccttccatg tgcgtaacgc ccccgaaaag ctgatggtga cgcatttcga ggggctgatg
     1801 ccgccgaccc tgatcaccgc cgaccgccgc cagatcctgg aattccgcga ggaataccag
     1861 gacatcgtgc tgaagccgct gttcggcaac ggcggcgccg gggtgtttca cgtgaagccg
     1921 gacgacgaga acctgaactc gctgctggaa atgttcaccc agctctaccg cgaaccggtg
     1981 atcgtgcagc gctatctgcc cgaggtgcgc gagggcgaca agcgcatcat cctggtggac
     2041 ggccgccccg ccggcgccgt caaccgcgtg cccatggccg gcgaggcgcg ctccaacctg
     2101 catgtgggcg gccgcgccat gaaggccgag ctgaccaccc gcgaccgcga gatctgcgac
     2161 gccatcggcc cgaccctggc cgatcgcggc ctgatcttcg tcggcatcga cgtcatcggc
     2221 ggctatctga ccgagatcaa cgtcacctcg ccgaccggca tccaggaaat cgaccgcttc
     2281 gacgacatcc gcatcgagtc gcagatctgg gacgccatcg aactgcgccg cgcctcgacg
     2341 gcccaggtgc cgtcggctta gggtcggccc tccgtgagtc cgtcatgccc gcgctcgacg
     2401 cgggcatcca cgcgcctcag actaagttat tgttttggca cgtaaacgtg gatcgccggg
     2461 tcaagcccgg cgatgacggt tgggggcggc gcgcgcgtcg gcacctgcaa atgcaggcgg
     2521 aaacgccccg caacttcaaa cgcggttgtc gcgcaactgc gatgcgagtt agaccccgcc
     2581 gccctgttcc gatgcagaaa catccccgtc tttcgcaacc cgcaaggtga agcggaaaac
     2641 gctgccgccg ccgggggcgg cctcgaccca gatgcggccg ccgtggcgtt ccacgatctt
     2701 cttggcgatg gccaggccga tgccggtgcc gggataggcg gcgcggttgt gaaggcgttg
     2761 gaaaataagg aaaacccgct cgcgcgcatc ctcggggatg ccgatgccgt tgtcttcgat
     2821 ggcgaaggtg gcgaaggcgc cgtcgcggtc ggccctgacc tggacgacgg gcgccgcgtc
     2881 ggcccgccgg tacttcaccg cgttgccgat caggttctgg aacagccgca ccagcagcgg
     2941 catctcgccc atcaccgccg gcagatcggc gggaagctcg accttggcgc cgctctctga
     3001 cagggcggcg gccaggttgg cgagcgcggc gtcgaccgcc agccgggttt ccaccctggc
     3061 gaagctgggc tcgccgcgat cgacgcggga ataggccaga aggtcgtcga tcatcgcctt
     3121 catgcggccg gcgccctcgc tcatgtagcc gaggaactcg cggccgtcgc cgtccaggcg
     3181 gtcgccgtag cggcgcccga tcaactgggc gtagctgccc atcatgcgca gcggctcctg
     3241 caggtcgtgc gaggcgatat aggcgaagtt ctccagttcg gcattggagc gggccagttc
     3301 ggcattggcg gcgctgagtt cggcggtgcg ctcggccacc atgcgctcct gcgccgcctt
     3361 ggcctcggcc aacgccgccc aactggcgcg caggcggccg aagaagacca ggctggcccc
     3421 cgacagcagc aggaagccgg ccaggtgcat cacgatggtc tggcgccgct gcggcgcgat
     3481 ctcgcccaac acgtcggcgg cggggatgct gacgctgatg ccgccacgga tgtcgccgac
     3541 gcgatagccc tgcttggcat ggcaggcgag gcagggttcc ttgacgcgca gcaaagccat
     3601 gtagcggaaa gccggacggt cacgatagac gccatgttcc agcacctcgg cagcatcgcc
     3661 gtgctcgaac cgtttcagcg cctctgcctc ccacgggtcg ggggcgttgc cggggcggat
     3721 ggggttgagg ctggtcaggc ggaaggcggc gccgttctgg ctttccacca gttcggaaat
     3781 ttgccgcgtc atgtaggcgg gattgacctt ggtgtactcg cggccgttga tgaccacgtc
     3841 gcgctcggaa tcgtcgagat aaggattggg cggtgtgtcc ttgccggccg gggcgtagac
     3901 gccgccatgg ccggcattcc acagccgcgt ggtctcgacc accgaaaaca gcatgcgggc
     3961 gcgcgccagc gccacttccc gcgcctgcgt ctccaaaaga tccaggttgt gcgccagcga
     4021 cagggctacc agccccgccc agaacgccac cgaaccgatc tccgaccggc gccctaccaa
     4081 attcatctgc gcctcattcg cattcctata caaaagggta attcgtctcc ctcattcggg
     4141 caaggcctgt gcgtaggtct tcgccgagaa atgagccaac tgttaggggt tgtcatcagg
     4201 cgtcggacgc gcgaaaacag cggtcgccca ttgcatgcaa tc
//
LOCUS       DATIKR010000066         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_194589, whole genome shotgun sequence.
ACCESSION   DATIKR010000066 DATIKR010000000
VERSION     DATIKR010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194589"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1401)
                     /gene="chrA"
                     /locus_tag="VLL76_01070"
     CDS             complement(79..1401)
                     /gene="chrA"
                     /locus_tag="VLL76_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HSV28106.1"
                     /translation="MHPTFAEAVRVWARIGLLSFGGPAGQIATMHRILVDEKKWVGEA
                     RFLHALNYCMLLPGPEAQQLATYVGWLLHKVPGGIVAGTQFVLPGFVVMMGLAALYAG
                     LNDVALVQGLFFGLKPAVLAVVLEAVLRIGRRAVRHALLRAMAAAAFAAIFLFSVPFP
                     VIVLVAGVIGYAGSRLGHPAFQAASGHGGGGAADAVIEDGAVHLRPRLRSTLGIVAAC
                     LALWLVPVALVAAFVPGAFGAIGLFFSKMAVVTFGGAYAVLGYVAQQAVEVHGWLTPG
                     EMLDGLGLAETTPGPLILVNQFVGFLAGFRQPGGLDPWLGGVLGALLTVWVTFLPSFL
                     WIFAGAPHVEAVRGNHALAGALTGITAAVVGVILNLSLWFALHVVFARVGDLQWGPLA
                     VPVPEWSSLQPVSLVLAAAAMVAMLRFKVGMLPTLAVSAVLGAAWRML"
     gene            complement(1411..>1616)
                     /locus_tag="VLL76_01075"
     CDS             complement(1411..>1616)
                     /locus_tag="VLL76_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HSV28107.1"
                     /translation="RAAAFVAEAGRQGVALSPTESFVVGRPHRDGVRISVSAPPSRDD
                     VERGLRILSGILAVAPHQVGMTV"
BASE COUNT          306 a          613 c          546 g          151 t
ORIGIN      
        1 gggattcggc gccggcgcag ccacgggggc ctggatgctg gcccggcggt ggaccgccgg
       61 caccaagctg gcgccggcct aaagcatcct ccacgcggcc cccaggacgg ccgagaccgc
      121 cagggtgggc agcatgccga ccttgaagcg cagcatcgcc accatggcgg cggcagccag
      181 gaccagcgac accggctgca ggctcgacca ctcgggtacc gggacggcca gcggccccca
      241 ttgcagatcg ccgacgcggg cgaacaccac gtgcagggcg aaccacagcg acaggttcag
      301 gatcacgccg accaccgccg ccgtaatgcc ggtcagggcg ccggccaagg cgtggttgcc
      361 gcgcaccgcc tcgacatggg gggcaccggc gaagatccac agaaaactgg gcaggaacgt
      421 cacccacacg gtgagcagcg cccccagcac gccgcccagc cacgggtcca gcccgcccgg
      481 ctggcggaag ccggccagga agccgacgaa ctggttgacc aggatcagcg gccccggcgt
      541 ggtctcggcc agccccaggc cgtcgagcat ctcaccgggg gtcagccagc catggacctc
      601 gaccgcctgc tgcgccacgt agcccagcac ggcgtaggcg ccgccgaagg tcaccaccgc
      661 catcttcgag aagaacagcc cgatggcgcc gaacgcgccg ggcacgaacg ccgccaccaa
      721 agcgaccggc accagccaca acgccaggca ggcggcgacg atccccaggg tcgagcgcag
      781 gcgtgggcgc agatggacgg cgccgtcctc gatcaccgcg tcggccgcgc caccgccgcc
      841 atggcccgac gccgcctgga aggcgggatg gcccaggcgc gagccggcat agccgatcac
      901 gccggccacc agcacgatca ccgggaacgg caccgagaac aggaagatgg cggcgaaagc
      961 cgccgccgcc atggcacgca gcaaggcatg ccggaccgcc cgccggccga tgcgcagcac
     1021 cgcctccagc acaaccgcca gcaccgccgg cttgagcccg aagaacagcc cctgcaccag
     1081 cgccacatcg ttgaggccgg catagagcgc cgccagcccc atcatcacca cgaagcccgg
     1141 cagcacgaac tgggtgccgg cgacgatgcc gccggggacc ttgtgcagca gccagcccac
     1201 ataggtcgcc agttgctgcg cctcggggcc gggcagcagc atgcaataat tcagcgcgtg
     1261 caggaagcgg gcctcgccca cccacttctt ctcgtccacc aggatgcggt gcatggtggc
     1321 gatctggccc gccggcccgc cgaacgacag cagcccgatg cgggcccaga ccctgacggc
     1381 ttcggcaaac gtggggtgca agggaagctc ctagacggtc atgccgacct gatgcggcgc
     1441 gacggcaaga attccagaca gaatgcgcaa tccccgctcg acgtcgtcgc ggctgggcgg
     1501 tgccgacacc gagatgcgca caccgtcgcg atggggccgg ccgaccacga agctttcggt
     1561 cggcgacagc gccacgccct ggcggcccgc ctcggcgacg aaggcggcgg cccgcc
//
LOCUS       DATIKR010000067         1933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_49303, whole genome shotgun sequence.
ACCESSION   DATIKR010000067 DATIKR010000000
VERSION     DATIKR010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49303"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..104)
                     /locus_tag="VLL76_01080"
     CDS             complement(<1..104)
                     /locus_tag="VLL76_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011287684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSV28108.1"
                     /translation="MERESMEFDVVVVGAGPSGLAAAIRLKQLAAEKG"
     gene            217..1020
                     /locus_tag="VLL76_01085"
     CDS             217..1020
                     /locus_tag="VLL76_01085"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSV28109.1"
                     /translation="MPLDLSPDQLLRWYVDAGVDETIGELPIDRFAAPARPPVQAVPQ
                     PERPAFQPAIVHAAPAVHPAQSSGTATHIASGCTSLAELRAALEGFEGLPLKQSAAST
                     VFADGNPEAAVMCIGEAPGQEEDRQGLPFVGPSGKLLDRMLASIGLDRSTAYITNVVP
                     WRPPANRKPTPDEIAVCLPFITRHIELVDPQVLILFGGAAASALLARHEGINRLRGHW
                     FDYSSPGLPRPVPALATFHPAYLLRTPEAKRGAWRDLLMAKRRLISATR"
     gene            1282..>1933
                     /locus_tag="VLL76_01090"
     CDS             1282..>1933
                     /locus_tag="VLL76_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HSV28110.1"
                     /translation="MTAAVMPGIGREARVAPLPKPLSAQDAETYARVFRLQDQGQWAA
                     ADRELGKVKDDLLKGHALARRFLASGYRPRYQELRAWMAEYSDHPQADAVYKLATAKG
                     VKGFGAIKQPVRGYLKGTGVDTSDDGGNWEEAAYAPDRGNAKARAVKTKFRQLLRKGG
                     DAQAMAVMAGAEARALDRLDLDEMKVALAADHFASGRDAEAVQWAEEAAASSGEELP"
BASE COUNT          297 a          675 c          631 g          330 t
ORIGIN      
        1 tcgcccttct cggcggcgag ctgcttcagg cggatggcgg cggccaggcc ggacggaccg
       61 gcgcccacca ccaccacgtc gaattccatc gattcgcgtt ccattgttct ttccccgatg
      121 ggccgttcgc aaactgggcg cctctataac acaagcttcg cggccgatac gaatccttca
      181 aacgcagggg tgatccgtgt tattttgtta gccgccatgc ccctagacct ctccccagac
      241 cagttgttgc gttggtatgt cgatgcaggc gtcgatgaga ccatcggcga gctgccgatc
      301 gaccgcttcg ccgcgccggc ccggccgccg gtccaggcgg tgccgcagcc cgagcgcccg
      361 gcgttccagc cggccatcgt ccatgccgcg ccggccgtcc accctgccca gtcctcggga
      421 actgccaccc acatcgcctc gggctgcacc agtctggccg agttgcgggc ggcgctggag
      481 ggcttcgagg ggttgccgct gaagcagtcg gcggcctcca ccgtgttcgc cgacggcaat
      541 cccgaggcgg cggtgatgtg catcggcgag gcgccggggc aggaagagga ccgccagggc
      601 ctgcccttcg tcggcccctc gggcaagctg ctcgaccgca tgctggcgtc gatcgggctg
      661 gaccgctcca ccgcctatat aacgaatgtc gttccgtggc ggccgccggc caaccgcaag
      721 ccgacgccgg acgagatcgc cgtgtgcctg cccttcatca cccgccacat cgaactggtc
      781 gatccgcagg tgctgatcct gttcggcggc gccgccgcct cggcgctgct ggcgcggcac
      841 gagggcatca accgcctgcg cggccactgg ttcgactatt cctcgcccgg cctgccccgt
      901 ccggtgccgg ccctggccac cttccacccc gcctatctgc ttcggactcc cgaggccaag
      961 cgcggggcat ggcgcgacct gctgatggcg aagcgtcggc tcatttcggc aacccgctga
     1021 atttccttgc taattccgat gcccgaactt tgccccatct ttcaggggtt gcttttgcgc
     1081 atccgggtca tttataaaac tgctgtgaca gttcgatatt tccgataaca aacgaggaga
     1141 acagccttgc gcgacaggct cctcccggcc gtgatgttgg cgatcatggt cgtgacctcc
     1201 ccggtccttg ccggcgatct gggctccaag aagggggcga tcgcagagca ggtggccgcg
     1261 gcctccggcg gacatggaac catgaccgcc gcggtgatgc ccggcatcgg ccgtgaagcg
     1321 cgcgtcgctc cgctgcccaa gccgttgtcc gcccaggatg cggaaaccta tgcgcgcgtc
     1381 ttccgtctgc aggatcaggg ccagtgggcc gctgccgacc gcgagttggg caaggtcaag
     1441 gacgatcttc tgaagggcca tgcgttggcg cggcgtttcc tggcttcggg ctaccgcccg
     1501 cgctatcagg aattgcgcgc ctggatggcc gaatattccg accacccgca ggccgacgcc
     1561 gtctacaagc tggcgaccgc caagggcgtc aagggcttcg gcgccatcaa gcagccggtg
     1621 cgcggctatc tcaagggcac cggggtcgac acctcggacg acggcggcaa ttgggaagag
     1681 gcggcttacg cccccgatcg cggcaacgcc aaggcgcgcg ccgtcaagac caagttccgc
     1741 cagttgctgc gcaagggcgg cgacgcccag gccatggcgg tgatggccgg cgccgaggcg
     1801 cgtgcccttg accggctgga tctcgacgag atgaaggtgg ccctggccgc cgaccatttc
     1861 gccagcggtc gcgacgccga ggcggtgcaa tgggccgagg aagccgccgc cagctcgggt
     1921 gaggaacttc ccg
//
LOCUS       DATIKR010000068         2250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_194609, whole genome shotgun sequence.
ACCESSION   DATIKR010000068 DATIKR010000000
VERSION     DATIKR010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194609"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VLL76_01095"
     CDS             <1..690
                     /locus_tag="VLL76_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV28111.1"
                     /translation="IGVSVWDYHQSGIVTTVAHEKPHRGIAHERFLPAGPFAILPMQG
                     NRSSIVWTEKLSLAPAIVAQSDDDFLAELMVRFGDFLGKVELAGPRFHYPLTLQVADR
                     AIDRRLALVGDAAHGMHPVAGQGMNMGIRDVAALAEAVVDARRLGLDVGGPDVLERYQ
                     RWRRFDNMLMLGLTDAMVRLFSNDIGPLKLARDLGLAAVQRMPAAKRFFMKHAMGVVG
                     DLPRMMRGERL"
     gene            complement(823..1275)
                     /locus_tag="VLL76_01100"
     CDS             complement(823..1275)
                     /locus_tag="VLL76_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HSV28112.1"
                     /translation="MTMGMTHHPEEIKVKKAEKVIEITFNDGKAFRLPAELLRVESPS
                     AEVQGHGPDEKKLVAGRSHVGIIAVEPVGNYAIRITFDDLHDSGIFTWDYLYWLGANQ
                     DQIWREYEAALAQAGLSRHPNATAEGMAAPAPKHSGCGCGSGGKGGCG"
     gene            complement(1272..1472)
                     /locus_tag="VLL76_01105"
     CDS             complement(1272..1472)
                     /locus_tag="VLL76_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HSV28113.1"
                     /translation="MPDRVPGIDPKLMEILVCPVSKGPLRYDSASKELISDKAGLAYP
                     IRDGIPIMLPDEARSLDQGGAQ"
     gene            complement(1481..2125)
                     /locus_tag="VLL76_01110"
     CDS             complement(1481..2125)
                     /locus_tag="VLL76_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HSV28114.1"
                     /translation="MAAGVENLPAVVPVFAVSGALLLPGARVPLTVFEPRYLAMTDDC
                     LGAGRLFALVQPRADGKGTAPGLYDVGCLARIVAFGETGDGRYLITALGLNRFRVAGE
                     AEGRSGYRRVQADYAPFAADGGPKADTAIDRHRLVNAVATYLHRHGVKADLAKLDPAD
                     DGEVVTALAMAAPLSPEEKQALLEAPTIADRAQLMIAMFEMALLAEDGGHMPVH"
     gene            complement(2127..>2250)
                     /locus_tag="VLL76_01115"
     CDS             complement(2127..>2250)
                     /locus_tag="VLL76_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28115.1"
                     /translation="DRAWNDDAARKQLVKFFEAFGPTSPLTIAGRRRLSSLLFS"
BASE COUNT          344 a          740 c          803 g          363 t
ORIGIN      
        1 atcggcgtca gcgtgtggga ctatcaccag agcggcatcg tcaccacggt ggcgcacgaa
       61 aagccccatc gcggcatcgc ccacgaacgc ttcctgcccg ccggcccgtt cgccatcctg
      121 cccatgcagg gcaaccgctc atccatcgtg tggaccgaaa agctgagcct ggcgccggcc
      181 atcgtcgcgc aaagcgacga cgacttcctg gccgagctga tggttcggtt cggggatttc
      241 ctgggcaagg tcgaactggc cgggccgcgc ttccactatc cgctgacgct gcaggtggcg
      301 gaccgcgcca tcgaccgccg tctcgcgctg gtgggcgacg ccgcccacgg catgcatccg
      361 gtggccggcc agggcatgaa catgggcatc cgcgacgtcg ccgccttggc cgaggcggtg
      421 gtcgacgccc gccgcctggg actcgacgtc ggcggccccg acgtgctcga gcgctaccaa
      481 cgctggcgcc ggttcgacaa catgctgatg ctggggctga ccgacgccat ggtgcggctg
      541 ttctcgaacg acatcggccc gctgaagctg gcccgcgacc tcggcctggc ggcggtgcag
      601 cgcatgccgg cggccaagcg cttcttcatg aagcacgcca tgggcgtggt cggcgacctg
      661 ccccgcatga tgcgcgggga aaggttgtaa gacaagaatg acgaaagcaa tcgcccgtca
      721 tggccgggct tgacccggcc atccacgcgc ctagagcaaa tgcggtgctg gacggcgcca
      781 cgtggatgcg cggatcaagt ccgcgcatga cgtaagtggc tgtcagccgc agccgccctt
      841 gccgcccgaa ccgcagccgc agccggaatg cttgggcgcc ggggcggcca tgccttcggc
      901 ggtggcgttg gggtggcgcg acaggccggc ctgggccagg gcggcttcgt attcgcgcca
      961 gatctggtcc tggttggcgc ccagccaata caggtagtcc caggtgaaga taccggaatc
     1021 gtgcaggtcg tcgaaggtga tgcggatggc gtaattgccg accggctcga cggcgatgat
     1081 gccgacatgg ctgcgtccgg ccaccagctt cttctcgtcc gggccgtggc cctggacctc
     1141 ggccgacggg ctttcgaccc gcagcagctc ggccggcagg cggaaggcct tgccgtcgtt
     1201 gaaggtgatc tcgatcacct tttcggcttt cttgaccttg atctcttcgg ggtggtgggt
     1261 cattcccatg gtcattgcgc tcctccctgg tccagcgacc gtgcctcgtc gggcagcatg
     1321 atcggaatgc cgtcgcggat cggataggcc aggccggcct tgtcgctgat cagttccttg
     1381 ctggcggaat catagcgcag cggtcccttc gagaccggac agaccaggat ttccatcagc
     1441 ttggggtcga tgccgggaac gcggtcgggc atggtgtctc ctagtgcacg ggcatgtggc
     1501 cgccgtcctc ggccagcagc gccatctcga acatggcgat catcagctgg gcgcggtcgg
     1561 cgatggtggg ggcttcgagg agggcctgct tctcctcggg cgaaagcggc gccgccatgg
     1621 ccagcgcggt cacgacctcg ccgtcgtcgg cggggtcgag cttggccaga tcggccttga
     1681 cgccgtggcg gtgcagatag gtggcgaccg cgttgaccag gcggtggcgg tcgatcgcgg
     1741 tgtcggcctt gggtccgcca tcggcggcga agggggcgta atcggcctgc acgcggcgat
     1801 agcccgagcg gccttcggcc tcgccggcga cgcggaagcg gttcagcccc aaggcggtga
     1861 tcaggtagcg gccgtcgccg gtttcaccaa acgccacgat gcgggccagg cagccgacgt
     1921 cgtacaggcc gggggcggtg cccttgccgt cggcgcgcgg ctgaaccagg gcgaacaggc
     1981 ggccggcgcc caggcaatcg tcggtcatgg ccaggtagcg gggttcgaaa accgtcagcg
     2041 gcacccgcgc gcccggaagc agcagcgccc ccgagacggc gaataccggc accacggcgg
     2101 gcaggttttc gacccctgcg gccatgtcac gagaacagca gcgacgacag gcgccggcgc
     2161 ccggcgatgg tcagcgggct ggtggggccg aacgcctcga aaaacttgac cagttgcttg
     2221 cgggcggcat cgtcgttcca ggcgcggtcg
//
LOCUS       DATIKR010000069         4964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_219015, whole genome shotgun sequence.
ACCESSION   DATIKR010000069 DATIKR010000000
VERSION     DATIKR010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4964
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219015"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..861
                     /gene="rapZ"
                     /locus_tag="VLL76_01120"
     CDS             <1..861
                     /gene="rapZ"
                     /locus_tag="VLL76_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HSV28116.1"
                     /translation="DGRVVIVTGLSGAGKTSALKVLEDLGYEAVDNLPLSLLTSLVRP
                     GESLARPLAVGIDIRTRDFGVEPVLAAIDRMMAEKGLDVRLLFLDCDDDVLTRRFTET
                     RRRHPLAADRPLLDGIRHERALVSPLKRRAAVVVDTSNLQPGEFKRALNGYFGLAADP
                     GLVVFVTSFAYRAGLPREADLVFDCRFLNNPHYVPALKELTGRDQGVADYVAADPVFA
                     DFFASTTNLLAPLLPRFAAEGKSYLTIAVGCTGGRHRSVFVAERLAAWLKETGVRVEL
                     RHRELGEGGP"
     gene            878..1285
                     /locus_tag="VLL76_01125"
     CDS             878..1285
                     /locus_tag="VLL76_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HSV28117.1"
                     /translation="MIGMVLVTHGRLADELVAAMEHVVGPQPNVGAVCIGPDDDMEQR
                     RKDILDSVAQCDDGHGVVVLTDMFGGTPSNLAISIMDKAKVEVIAGVNLPMLIKLASV
                     RHSEALADAVASAQEAGRKYINVASKLLTQDRK"
     gene            1282..1581
                     /locus_tag="VLL76_01130"
     CDS             1282..1581
                     /locus_tag="VLL76_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HSV28118.1"
                     /translation="MTIDATDAAGDEIKRTATIANRRGLHARAAAKFVKLAATFDAQI
                     QVSHRGTEVSGLSIMGLMMLAAAPGCCIELSARGAQAESAIKALVDLIDQKFDED"
     gene            1635..3434
                     /gene="ptsP"
                     /locus_tag="VLL76_01135"
     CDS             1635..3434
                     /gene="ptsP"
                     /locus_tag="VLL76_01135"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HSV28119.1"
                     /translation="MKPSDDGSATTTTRPCLPQAETILDGMGVSRGIAIGIVHRHDAE
                     AVSVVEYKIAAGRVAAEQARFAEAAQRAGRQVEKLQEKAQGLEGSAAEELGYLLDAYQ
                     QMLRGSRLIRGVERRIDAERVNAEAAVQHEIDEIARGFEAMDDAYLAARVADIRDLGR
                     RLIRNLTNQPYRPFQRLPKNAIILAEELTPADTALLDPRMVAGLATVFGGAESHTAIM
                     ARSLGLPAVLGVAGLMKGARSGDVAIIDGGAGRVILNPSEDLLTAYRRKRADYLRHRR
                     QLARLKDVPAVTKDGARIVLQANIELPGEVESVLAAGAEGVGLLRSEFLFMNRDDIPD
                     EDEQFAILKELVERMDGRPVTIRTLDVGGDKLAHGLGITPGPNPSLGLRAVRLSLARP
                     ELLEAQFAAILRASAHGPIRILIPMVATVEEMRAVREVMNRVIKQLKRLDVPMADPLP
                     PLGVMIEVPGAALGADALAWHADFFAIGTNDLTQYTLAIDRADETVAHLYNPLHPAVL
                     RLIQFTAEAALRARIPVSVCGEIAGDPRYAALLMGLGIRDLSMSATNIPVVKQRIRAM
                     DLVAATRRARVIMDQSDSARIAQLLDSFNEGEG"
     gene            3667..>4964
                     /locus_tag="VLL76_01140"
     CDS             3667..>4964
                     /locus_tag="VLL76_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HSV28120.1"
                     /translation="MPDTLDLLSDLVTKAKAAGADAADAVLIDSVSLSLGYRLGKLER
                     LERSESGDVGLRVLLGKRQAMVSSSDRSATALDELVERAVAMARTVPEDPYAGLADPS
                     ELATSFPDLDACDPVEPTAEQLVDLVRRAEDAARAVEGVTNSEGADAGWGRSAVAFVA
                     SNGFSHRYAVTSGSVSVAVLAGDTASGMERDHDYSAAVYMSDLRSPEDVGHEAGRRAV
                     RRLGARKVKTCQVPIVFDPRVSRGLLGHLLGAINGSSVSRGTSFLKDKLGQQVFKSGI
                     TVVDDPHRVRGLRSRPCDGEGVATRRMNLVEDGRLATWLLDCRSARQLGMKTTGHASR
                     GTASPPSPSASNVYLEPGPVTVNEMIGDIPQGFYVTEVFGQGVNLVTGDYSRGAAGFW
                     IEGGEIAYPVSEITIAGNLKDMFAHISPANDLVFRYGVDCP"
BASE COUNT          777 a         1761 c         1679 g          747 t
ORIGIN      
        1 gacgggcgtg tggtcatcgt caccggcctg tccggggcgg gcaagacctc ggcgctcaag
       61 gtgctggagg atctgggcta cgaggcggtg gacaacctgc cgctgtcgct gctgaccagc
      121 ctggtgcgcc ccggtgaaag cctggcccgg ccgctggcgg tgggcatcga catccgcacc
      181 cgcgatttcg gcgtcgagcc ggtgctggcc gccatcgacc gcatgatggc ggaaaagggc
      241 ctggacgtgc ggctgctgtt cctcgattgc gacgacgacg tgctgacgcg ccgcttcacc
      301 gagacccgcc gccgccaccc gctggccgcc gaccgcccgc tgctggacgg catccgccac
      361 gagcgcgccc tggtgtcgcc cctgaagcgc cgcgccgccg tggtggtgga cacctcgaac
      421 ctgcagccag gcgagttcaa gcgggcgctg aacggctatt tcggcctcgc cgccgatccc
      481 ggactggtgg tgttcgtcac ctccttcgcc tatcgcgccg gcctgccgcg cgaggcggac
      541 ctggtgttcg actgccgctt cctcaacaat ccgcattacg tgccggctct gaaagagctg
      601 accggccggg accagggcgt ggccgactat gtcgccgccg acccggtgtt cgccgatttc
      661 ttcgcctcga ccacgaacct gctggcgccg ctgctgccgc gcttcgcggc cgagggcaaa
      721 agctacctca ccatcgccgt cggctgcaca gggggtcgcc atcgttccgt cttcgtggcg
      781 gagcgtctgg ccgcgtggct gaaggagaca ggggttcggg tcgagctcag gcatcgcgag
      841 ctcggcgagg ggggaccgtg accgcaaggg gaaggcaatg atcggaatgg tactcgtcac
      901 ccatggacgg ctggccgacg agctggtggc cgccatggag cacgtggtcg ggccgcagcc
      961 caatgtcggc gccgtgtgca tcggcccgga cgacgacatg gagcagcggc gcaaggacat
     1021 cctggacagt gtcgcgcaat gtgacgacgg ccacggcgtc gtggtgctga ccgacatgtt
     1081 cggcggcacg ccgtcgaacc tggcgatctc gatcatggac aaggccaagg tcgaggtcat
     1141 cgccggcgtc aacctgccca tgctgatcaa gctggccagc gtgcggcatt ccgaggccct
     1201 ggccgatgcc gtcgcctcgg cccaggaggc cgggcgcaaa tacatcaacg tggcctcgaa
     1261 actgctgacc caggatcgca aatgaccatc gacgccaccg acgccgccgg cgacgagatc
     1321 aagcgcacgg ccaccatcgc caaccggcgc ggcctgcacg cccgcgccgc cgccaagttc
     1381 gtgaagctgg ccgccacctt cgacgcccag atccaggtgt cgcatcgcgg caccgaggtg
     1441 tcgggcctgt cgatcatggg cctgatgatg ctggccgccg ctcccggctg ctgcatcgag
     1501 ctgagcgccc gtggcgccca ggcggaaagc gccatcaagg cgctggtcga cctgatcgac
     1561 cagaaattcg acgaggattg aagacggcgc caagccgcga ttgttgatca cagggaaggc
     1621 gtccgaggga gatgatgaag cccagcgacg acggaagcgc caccaccacc acccgcccct
     1681 gtctgcccca ggctgagacc attctcgacg gcatgggcgt cagccgcggc atcgccatcg
     1741 gcatcgttca ccgccatgac gccgaagcgg tgtcggtggt cgaatacaag atcgccgccg
     1801 gccgggtggc ggccgagcag gcgcgcttcg ccgaggccgc ccagcgcgcc ggccgccagg
     1861 tcgaaaagct gcaggaaaag gcccaggggc tggagggctc cgccgccgag gaactcggct
     1921 acctgctcga cgcctatcag cagatgctgc gcggctcgcg cctgatccgg ggtgtggagc
     1981 gccgcatcga tgccgagcgg gtcaacgccg aggccgccgt ccagcacgag atcgacgaga
     2041 tcgcccgtgg cttcgaggcc atggacgacg cctatctggc cgcccgcgtc gccgacatcc
     2101 gcgacctcgg ccgccggctg atccgcaacc tgaccaacca gccctatcgc ccgttccagc
     2161 gcctgcccaa gaacgccatc atcctggccg aggagctgac gccggcggac accgccctgc
     2221 tggacccgcg catggtcgcc ggcctcgcca ccgtgttcgg cggcgccgaa agccatacgg
     2281 cgatcatggc gcgctcgctg gggctgccgg cggtgctggg cgtggccggg ctgatgaagg
     2341 gggcgcgctc gggcgacgtc gccatcatcg acggcggcgc cggccgcgtg atcctcaacc
     2401 cgtccgagga cctgctgacg gcctatcgcc gcaagcgggc cgactatctg cgccaccgcc
     2461 gccaactggc ccgcctcaag gacgtgccgg cggtgaccaa ggacggcgcc cgcatcgtgc
     2521 tgcaggccaa tatcgagttg ccgggcgagg tggagtcggt gctggcggcg ggggccgagg
     2581 gcgtcggcct gctgcgttcg gaattcctgt tcatgaaccg cgacgacatc cccgacgagg
     2641 acgagcagtt cgccatcctc aaggagctgg tcgagcgcat ggacggccgc cccgtcacga
     2701 tccgcaccct cgatgtgggc ggcgacaagc tggcccacgg cctcggcatc acgccgggac
     2761 ccaacccgtc gctgggcctg cgcgccgtgc ggctgtcgct ggcccggccg gaattgctgg
     2821 aggcgcaatt cgcagccatc ctgcgcgcct cggcccacgg ccccatccgc atcctcatcc
     2881 ccatggtcgc caccgtcgag gagatgcggg cggtgcgcga ggtgatgaac cgggtcatca
     2941 agcagctcaa gcgcctcgac gtccccatgg ccgacccgct gccgcccttg ggcgtgatga
     3001 tcgaggtgcc gggcgccgct ttgggcgccg acgccctggc ctggcacgcc gatttcttcg
     3061 ccatcggcac caacgacctg acccagtaca ccctggccat cgaccgcgcc gacgagaccg
     3121 tggcgcacct ctacaatccg ctgcacccgg cggtgctgcg cctgatccag ttcaccgccg
     3181 aggcagccct gcgcgcccgc atcccggtca gcgtgtgcgg cgagatcgcc ggcgacccgc
     3241 gctatgcggc cctgctgatg ggcctgggca tccgcgacct gtccatgtct gccaccaaca
     3301 ttccggtagt caagcagcgc atccgcgcca tggaccttgt ggcggcgacc cgccgggcgc
     3361 gggtgatcat ggaccagtcg gactcggccc gaatcgccca attgctcgac agcttcaacg
     3421 aaggggaggg gtgaggagga tgtcggatga caaaagcgct tgtcactctg aggcgcagcc
     3481 gaagagtctt tcaggcaccg ccggcggcca cctcgggtta aagatccttc gctgacgctc
     3541 aggatgacat cggattcatg tccatctgtg tcccatgaat gggtggcggc cggttggtgg
     3601 gccgtaagcc ctcttgcgca actccgccca agcccccaag ctcagacgga aagcaaggag
     3661 accttcatgc ccgacacgct ggacctgctg tccgatctgg tgaccaaggc caaggccgcc
     3721 ggtgccgatg ccgccgacgc cgtgctgatc gattcggtat cgctgtcgct gggctatcgc
     3781 ctgggcaagc tggagcggct tgagcgcagc gaatcgggcg acgtcggcct gcgcgtgctg
     3841 ctgggcaagc gccaggccat ggtgtcgtcg tcggaccgtt cggccacggc gctggacgaa
     3901 ctggtcgagc gcgccgtcgc catggcgcgc acggtgccgg aagaccccta tgccggcctg
     3961 gccgacccgt ccgagctggc gaccagtttc cccgacctcg acgcctgcga ccccgtcgaa
     4021 cccaccgccg agcaactggt cgacctggtg cgccgcgccg aggatgccgc ccgcgccgtc
     4081 gagggcgtca ccaattccga aggcgccgat gccggctggg gccgctcggc ggtggccttc
     4141 gtggcctcca acggtttttc ccaccgctat gccgtgacca gcgggtcggt gtcggtggcg
     4201 gtgctggccg gcgacaccgc ctcgggcatg gaacgcgacc acgattacag cgctgccgtc
     4261 tacatgtccg acctgcgctc gcccgaagat gtcggccacg aggccggccg ccgcgccgtg
     4321 cgccgcctgg gggcgcgcaa ggtcaagacc tgccaggtcc ccatcgtgtt cgacccgcgc
     4381 gtgtcgcgcg gcctgctcgg ccatttgctg ggggccatca acggctcttc ggtgtcgcgc
     4441 ggcaccagct tcctcaagga caagctgggc cagcaggtgt tcaaatcggg gatcaccgtg
     4501 gtcgatgacc cccaccgggt gcgcggcctg cgctcgcgcc cgtgcgacgg cgagggtgtg
     4561 gcgacccggc gcatgaacct ggtcgaggac ggccggctgg ccacctggct gctggattgc
     4621 cgctcggccc gccaattggg catgaagacc accggccatg ccagccgggg caccgcctcg
     4681 ccgcccagcc cgtcggccag caacgtctat ctggaacccg gcccggtgac ggtcaacgag
     4741 atgatcggcg acatccccca gggcttctac gtcaccgagg tgttcggcca gggcgtcaac
     4801 ctggtcaccg gcgactattc gcgcggcgcc gccggtttct ggatcgaggg cggcgagatc
     4861 gcctatccgg tcagcgagat caccatcgcc ggcaacctca aggacatgtt cgcccacatc
     4921 agcccggcca acgacctggt gttccgctat ggcgtcgact gccc
//
LOCUS       DATIKR010000070         1820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_37425, whole genome shotgun sequence.
ACCESSION   DATIKR010000070 DATIKR010000000
VERSION     DATIKR010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37425"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VLL76_01145"
     CDS             complement(<1..627)
                     /locus_tag="VLL76_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28121.1"
                     /translation="MVKPSDIESAERSVWTLFAMLLALSLAALGYGAWSDFRAEAQAA
                     QLQASEMARVVADRTGAELRTAIEGLARIEAVIAGRPGRAVAHKAQLLAVLRSVPAGW
                     SIAVADASGRTTFLSIDEKASLDLSVRDFFRRHAAGEEVVIGPMLKDRVRGEPIVTVS
                     RRLDGPDGSFRGVVAMALRPGDLTQPVLDVGDDSVVAVLMPDGTFVMRN"
     gene            complement(734..>1820)
                     /locus_tag="VLL76_01150"
     CDS             complement(734..>1820)
                     /locus_tag="VLL76_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase C-terminal
                     domain-containing protein"
                     /protein_id="HSV28122.1"
                     /translation="AAHHGLSIDRGALSRVRQSAKDWRRRIGLKAGEEDGEARDAGLL
                     LAFAYPDRIARVRPGGDRRYALANGRGAVFADAEPLSAEEFLVAAELDGDRREARIFL
                     AAPLLKAEIEEHFADAIRTVEAVEWNPRDEAVTARRQRRLWKLVLDDHKLDKASPDAL
                     AAAMAEGIRAMGLACLPWTTELERFRERVAFLRREDPDGGWPDTSDAALLDSLEDWLG
                     PYLSGVTRRAHLPRLDLAAALHGVVDWNAKRRLDEMAPTHVTVPSGSRVSIDYAGDIP
                     VLAVRLQEMFGCADTPRVAGGKVPLLLHLLSPARRPVQVTRDLASFWANAYHAVKADL
                     KGQYPKHWWPDDPMQAEPTARAKPRGK"
BASE COUNT          273 a          651 c          649 g          247 t
ORIGIN      
        1 gttgcgcatc acgaaggtgc cgtccggcat cagcaccgcc acgacgctgt cgtcgcccac
       61 gtccagcacc ggctgcgtca ggtcgcccgg cctcaacgcc atggcgacca cgccccggaa
      121 cgacccatcg ggtccgtcga ggcggcggct gacggtgacg atgggctcgc cgcgcacccg
      181 gtccttcaac atggggccga tcaccacctc ctcgccggcg gcatggcgcc ggaagaagtc
      241 gcggaccgac agatccagcg aagccttctc gtcgatgctg agaaaggtgg tgcggccgct
      301 ggcatcggcg acggcgatgc tccagccggc gggaaccgac cgcagcaccg ccagcaattg
      361 cgctttgtgc gccaccgccc gtcccggccg ccccgcgatc accgcctcga tgcgggcaag
      421 gccctcgatg gcggtgcgga gctcggcgcc ggtgcggtcg gcgaccacgc gggccatctc
      481 gctggcctgc aattgcgccg cttgggcctc ggcccggaaa tcggaccagg cgccatagcc
      541 cagcgccgcc agcgacaggg ccagcagcat ggcgaacagg gtccacaccg accgctcggc
      601 cgactcgata tcgctaggct tgaccaaccg tccacccctg caccgcaccc cacgcgggag
      661 tttattgggg agccggatta attcacaata atacgaaata cggtaagggc tggtcggatg
      721 gcgtagtcca ggcctatttc ccccggggct tggcccgggc ggtcggttcc gcctgcatgg
      781 ggtcgtcggg ccaccaatgc ttggggtact gacccttcag gtccgccttg accgcgtgat
      841 aggcattggc ccagaagctg gcgaggtcgc gggtgacctg gaccgggcgg cgggccggcg
      901 acagcagatg cagcagcagc ggcaccttgc cgcccgccac gcgcggggtg tcggcgcagc
      961 cgaacatctc ctgcagccgc accgccagca ccggaatgtc gccggcatag tcgatggaca
     1021 cgcggctgcc cgacggcacc gtgacatggg tcggcgccat ttcgtcgagg cgacgcttgg
     1081 cgttccaatc caccaccccg tgcagggcgg cggcgaggtc gaggcgcggc aggtgggcgc
     1141 ggcgggtgac gcccgagaga taaggcccca gccagtcttc cagcgagtcc agcagcgccg
     1201 cgtccgaggt gtcgggccag ccgccgtcgg ggtcctcgcg ccgcaggaag gcgacccgct
     1261 cgcggaagcg ttccagctcg gtcgtccacg gcaggcaggc caggcccatg gcgcggatgc
     1321 cctcggccat ggcggcggcc agggcgtcgg gcgacgcctt gtccagcttg tggtcgtcca
     1381 gcaccagctt ccacaggcgg cgctggcggc gggccgtcac cgcctcgtcg cgcgggttcc
     1441 actccaccgc ctcgacggtg cggatggcat cggcgaaatg ctcctcgatc tcggccttga
     1501 gcaggggcgc ggccaggaag atgcgggctt cgcggcggtc gccgtccaac tcggcggcga
     1561 ccaggaattc ctcggccgac agcggctcgg catcggcgaa cacggcgccg cgaccgttgg
     1621 cgagggcata gcggcggtcg ccgccgggcc gcacgcgggc gatgcggtcg ggataggcga
     1681 aggcgagcag caggccggcg tcgcgcgcct cgccgtcctc ctcgcccgcc ttcaatccga
     1741 tgcgccggcg ccagtccttg gccgattggc gcacccgcga cagggcgccg cggtcgatgg
     1801 acaggccgtg atgggcggcg
//
LOCUS       DATIKR010000071         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_61757, whole genome shotgun sequence.
ACCESSION   DATIKR010000071 DATIKR010000000
VERSION     DATIKR010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61757"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VLL76_01155"
     CDS             <1..559
                     /locus_tag="VLL76_01155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28123.1"
                     /translation="AEFMKAKGDETAANGSTIPDGPQVASASPYLNRQILAEQPAQPA
                     QGQEQKTSTDPRAESLVTMASAPIANPGQSALLKPVDKLTQAEMQDMIASPQGEDLWQ
                     ATGKLGGKVAEAAAGRSAPPSHAAIFSDQRQKATFGWLLSFPGHQFQSSMSRPIMRSK
                     AAPARVSQASTRREAILLIMAQPSC"
     gene            718..1020
                     /locus_tag="VLL76_01160"
     CDS             718..1020
                     /locus_tag="VLL76_01160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSV28124.1"
                     /translation="MAYDIILEGATVEIRLAGELTFAQHRKFRQVVANIEQTTPAHVT
                     FDLSRVEYIDAAGLGLLLVARDAVSNKGGRSALAGAQGQVGRMLAVARFSDIFNAA"
     gene            1024..>1507
                     /locus_tag="VLL76_01165"
     CDS             1024..>1507
                     /locus_tag="VLL76_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV28125.1"
                     /translation="MAALRQTLADLWQGGTLPVLGRVSIRLRIAALVGLALGGAAAFG
                     AVYAYAAHRTDAALVAQDGFRRLNDLAAEAQARSLAMQVHAEQFLRERDARHADSFRA
                     DIARVATAVSAMRAIPESRNEAGRLAELADGFDALAGEFEHMAAEAARLGLTEQDGLR
                     G"
BASE COUNT          254 a          544 c          491 g          218 t
ORIGIN      
        1 ggccgaattc atgaaggcca agggagacga aacggccgcc aacggctcga ccatccccga
       61 cgggccgcag gtcgcgtcag cttcgccgta tctcaatcgg cagatcctgg cggagcagcc
      121 tgcccagccc gcccaagggc aggaacaaaa aacgtccacg gacccccgtg ccgaatcgct
      181 ggtcaccatg gcctccgccc ccatcgccaa tcccgggcag tcggccctgc tgaagccggt
      241 ggacaagctg acccaggcgg agatgcagga catgatcgcc tcgccccagg gcgaggatct
      301 gtggcaggcc acggggaaac tgggaggcaa ggtggccgag gccgccgcgg ggaggagcgc
      361 gcctccctcc cacgccgcca tcttttcaga tcagcgccag aaagccacct tcggctggct
      421 tttgtcgttt ccggggcacc agttccaatc cagcatgtcg aggccgatca tgcggtcgaa
      481 ggcggctccg gcgcgggtca gccaggcatc gacgcggcgg gaagcaatcc tgttgatcat
      541 ggcgcagccc tcttgttgac ttcgccttgc atcgcgtaag tcaagcaccc agtcaaatga
      601 agcaattatg accggtcgcg ccgtcacgaa accgtcactt taccttaacc gagacttaac
      661 gccggcgctt gtgcggatcg ggcataaggc gggggtgtcc gaaaaggagg tccccccatg
      721 gcttatgaca tcatcctgga aggcgccacc gtagagatcc gcctggccgg cgaactgacc
      781 ttcgcccagc accgcaagtt ccgccaggtc gtcgccaaca tcgaacagac cacgcccgcg
      841 cacgtcacct tcgacctgtc gcgggtcgaa tacatcgacg ccgccgggct ggggctgctg
      901 ttggtggccc gcgacgcggt atcgaacaag ggcggccgca gcgcgcttgc cggcgcccag
      961 ggacaggtag gccgcatgct ggcggtcgcc cgcttctccg acatcttcaa cgcggcctga
     1021 gccatggccg cgctccgcca gaccctggcc gacctgtggc agggcggcac cctgcccgtg
     1081 ctgggccgag tgtccatccg cctgcgcatc gccgccctgg tgggcctcgc cctgggcggc
     1141 gccgccgctt tcggcgcggt ctatgcctat gccgcccacc gcaccgacgc ggccctggtg
     1201 gcgcaggacg gctttcgccg cctcaacgac ctggcggccg aggcgcaggc gcgctcgctg
     1261 gcgatgcagg tccacgccga gcagttcctg cgcgagcgcg atgcccgcca tgccgacagc
     1321 ttccgcgccg acatcgcccg cgtcgccacg gcggtgtcgg ccatgcgcgc catccccgaa
     1381 agccgcaacg aggcgggccg cctggccgaa ctcgcggacg gcttcgacgc attggccggc
     1441 gagttcgagc acatggccgc cgaggccgcc cggctgggcc tgaccgagca ggacggcctg
     1501 cgcggac
//
LOCUS       DATIKR010000072         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_158372, whole genome shotgun sequence.
ACCESSION   DATIKR010000072 DATIKR010000000
VERSION     DATIKR010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158372"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..814
                     /locus_tag="VLL76_01170"
     CDS             <1..814
                     /locus_tag="VLL76_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007040889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HSV28126.1"
                     /translation="LEALGFSGKPLADYLGLLARPNSVLLVTGPTGSGKTTTLYASLK
                     RITTRESKIVTVEDPVEYQVPGVTQIQVQPQVGLNFGHILRSILRHDPDVIMVGEIRD
                     LETAEIAVQAALTGHLVLSTLHTNSAAATVTRLLDMGVADYLITSTLAGVVAQRLVRR
                     LCPHCRQATIPMPELIRQTGLDRLSDDPRLFVAAGCGSCGGTGYSGRTTIFEVLTMDD
                     EIRRLVLRHAEAGEIQRAAMAAGMRSMYEDGLLKVLTGQTSLDEVLRVTREN"
     gene            816..>1600
                     /locus_tag="VLL76_01175"
     CDS             816..>1600
                     /locus_tag="VLL76_01175"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV28127.1"
                     /translation="MPSFRYKIVTEAGQVVEGRSEADSKAALVARFRQLGQLPVRVEA
                     VGTWRLGFSAGRAMPPRDLALATRQLATLVTAGMPIDRALDFAGRSLQGANSRAALAR
                     VRERLVGGAPLADALAADAAGFPLFYVATVRAGEAGGALGDVLGRLADFLERSDAMRQ
                     QVRTAMVYPIVLLLTAVVILTLMVTVVLPQFEPLFAEAGDRLPVTTRMVIAASQAIRA
                     HGLVALALVPLVVWLAAKVLAAPAMRRRWDGLVLRLPLVGRLLR"
BASE COUNT          202 a          570 c          572 g          256 t
ORIGIN      
        1 cctggaggcc ttgggctttt ccggcaagcc gctggccgat tacctgggcc tgctggcgcg
       61 gcccaattcg gtgctgctgg tgacggggcc gaccggcagc ggcaagacca ccacgcttta
      121 tgcctcgctc aagcgcatca ccacccgcga aagcaagatc gtcaccgtcg aggacccggt
      181 cgagtatcag gttccaggcg tcacccagat ccaggttcag ccgcaagtgg ggctgaattt
      241 cggccatatc ctgcgctcga tcctgcgcca cgaccccgac gtcatcatgg tgggcgagat
      301 ccgcgacctg gagaccgccg agatcgcggt gcaggcggcg ctgaccggcc atctggtgct
      361 gtccaccctg cacaccaact cggccgccgc cacggtgacg cgtctgctgg acatgggggt
      421 cgccgactac ctgatcacct cgaccctggc cggggtggtg gcgcagcggc tggtgcggcg
      481 gctatgcccc cattgccgcc aggcgaccat ccccatgccc gagctgatcc gccagaccgg
      541 gctcgaccgc ctgtccgacg acccccggct gttcgtggcc gccggctgcg gctcctgcgg
      601 cggcaccggc tatagcgggc gcaccaccat cttcgaggtg ctgaccatgg acgacgaaat
      661 ccgccgcctg gtgctgcgcc atgccgaggc cggcgagatc cagcgcgccg ccatggcggc
      721 gggcatgcgc tcgatgtacg aggacggcct gctgaaggtg ctgaccggcc agacctcgct
      781 cgacgaggtg ctgcgggtga cgcgggagaa ctgacatgcc gtccttccgc tacaagatcg
      841 tcaccgaggc cggccaggtg gtcgagggcc gctcggaggc cgacagcaag gccgccctgg
      901 tcgcccgctt ccgccaactg ggccagttgc cggtgcgggt cgaggcggtc gggacctggc
      961 gcctgggctt ttccgccggc cgggcgatgc cgccgcgcga cctggccttg gcgacgcgcc
     1021 agttggccac cctggtcacc gccggcatgc ccatcgaccg cgcgctggac ttcgccggcc
     1081 gttcgctgca aggcgccaat tcccgcgcgg cgctggcgcg ggtgcgcgaa cggttggtgg
     1141 gcggagcgcc cctggccgat gccctggccg ccgatgcggc cggcttcccg ctgttctacg
     1201 tcgccaccgt gcgggcggga gaggccggcg gcgccctggg cgacgtgctg gggcgactgg
     1261 ccgatttcct ggagcggtcc gatgccatgc gccagcaggt gcgcaccgcc atggtctatc
     1321 ccatcgtgct gctgctgacg gcggtggtga tcctcaccct gatggtgacg gtggtgctgc
     1381 cgcaattcga gccgctgttc gccgaggccg gcgaccgcct gcccgtcacc acccgcatgg
     1441 tcatcgccgc ctcgcaggcc atccgcgccc atgggctggt ggcgctggcg ctggtgccgc
     1501 tggtggtttg gctggcggcc aaggtcctgg cggcacctgc catgcggcgg cgctgggacg
     1561 ggctggtgct gcggctgccg ctggtgggcc ggctgctgcg
//
LOCUS       DATIKR010000073         2330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_61784, whole genome shotgun sequence.
ACCESSION   DATIKR010000073 DATIKR010000000
VERSION     DATIKR010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61784"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VLL76_01180"
     CDS             <1..460
                     /locus_tag="VLL76_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28128.1"
                     /translation="IAIAGKAWRGVSAQSDGAVVAGFLRRQLVQAVPAQPDASGLSGD
                     SDRLEFLGPAPARSMPAGLYRHRLELRRDELWYAWAPLDGGTGHERRLLTGIGRLDIA
                     YAGREGRWQSAWSDPARLPRLVRLRLVVAGEDWPELVAGPVVDWPVLDRP"
     gene            504..1373
                     /locus_tag="VLL76_01185"
     CDS             504..1373
                     /locus_tag="VLL76_01185"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HSV28129.1"
                     /translation="MMLSLPRPVHDALRWWSGELAALLPAWARRRKRRILLPPARVLV
                     RQAGFPLAAEENLREVVAFEMDRLLPFQADAVYFDVLVRARDPEQGRLTAEVVAVRRD
                     VVDEVVNTAGGPLAGIGVEGLDPRFELCPPAIRSRALGRAERIMLAVGCLLWLAAAAA
                     PLVQAGLRIDALEADLAEVRADSGDADRLRREIEASLAAERLIVEARNAKPTALAALD
                     EISALVPDDSWLQQVRLGPDGIEVQGSAAAAAQLLGAVEDSGLFAAAAFRAPVTQDAQ
                     GGRERFMIGAKWE"
     gene            1370..1930
                     /gene="gspM"
                     /locus_tag="VLL76_01190"
     CDS             1370..1930
                     /gene="gspM"
                     /locus_tag="VLL76_01190"
                     /inference="COORDINATES: protein motif:HMM:NF040576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HSV28130.1"
                     /translation="MNQRLAGRLGAVGVLAALVCVPVFGLMMPVLDHHAGQQERIALL
                     ESQLARLKAAAAQREDLKRQQAELAARRGKSGLLLTGGSEALATATLQNMIKTAVARA
                     GGELRSTQALPVTAGQGARRLTVRALLSTDVEGLRTFLHAIEAGRPLLFVDDLDVRAR
                     PGGRDDDGDRVALEIRVDVTGYLGGE"
     gene            1930..>2330
                     /locus_tag="VLL76_01195"
     CDS             1930..>2330
                     /locus_tag="VLL76_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28131.1"
                     /translation="MRRLVIPAFVLAGAIAAAASAWPADDPPVEVAASRLPPLPPAPT
                     WQPPPIDSFAEMVERPLFTPSRRPPARKVEAAMPLKTPEGRLVGVVVGNGAKVALIEE
                     TGGTKAIRRLKEGQSFDGWMVADIAPGRVLL"
BASE COUNT          277 a          823 c          888 g          342 t
ORIGIN      
        1 catcgccatc gccggcaagg cttggcgggg tgtgtcggct caatcggatg gggcggtggt
       61 ggcggggttc ctgcgccgcc agttggttca ggcggtgccc gcccagcccg atgccagcgg
      121 cctgtcgggg gactcggacc ggctggaatt cctcggcccg gcgccggccc ggtcgatgcc
      181 cgccggcctc taccgtcacc gcttggaact gcgccgcgac gagttgtggt acgcctgggc
      241 gccgctggac ggtggcaccg gccacgaacg ccgcctgttg acaggcatcg ggcggctcga
      301 catcgcctat gcgggacggg aggggcgctg gcaatcggcc tggtccgacc ccgcccgcct
      361 gcccaggctg gtgcggctgc ggctggtcgt ggcgggcgag gactggcccg aactggtggc
      421 cgggccagtg gtcgattggc cggtgctcga ccgtccgtga ggccgattgc cggccggccg
      481 gggcattgcc tagcatcccg gccatgatgc tctcgctgcc ccgccccgtg cacgacgccc
      541 ttcgctggtg gagcggcgag cttgccgccc tgctgcccgc ctgggcgcgc cggcgcaagc
      601 gccgcatcct gctgccgccg gcccgtgtgc tggtgcgcca ggccggcttc cccttggccg
      661 ccgaggagaa cctgcgcgag gtggtggcgt tcgagatgga ccggctgttg ccgttccagg
      721 ccgacgccgt ctatttcgac gtcctggtgc gtgcccgcga ccccgagcag ggccgcctga
      781 ccgccgaggt ggtcgccgtt cgccgcgacg tggtggacga ggtggtcaac accgccggcg
      841 gacccttggc cggcatcggc gtcgaaggcc tggacccccg cttcgagcta tgcccgcccg
      901 ccatccgcag ccgggccttg ggaagggcag agcggatcat gctggccgtg gggtgcctgc
      961 tgtggctggc ggcggccgct gcgccgctgg tgcaggccgg gctgcgcatc gacgcgctgg
     1021 aagcggacct cgccgaggtg cgggccgatt ccggcgatgc cgaccgcctg cgccgcgaaa
     1081 tcgaggcctc cctggccgcc gagcgcctga ttgtcgaggc ccgcaacgcc aagcccaccg
     1141 ccctggccgc gctcgacgag atcagcgccc tggtgcccga cgattcgtgg ctgcagcagg
     1201 tgcgtctggg gccggacggc atcgaggtcc agggcagcgc cgccgccgcc gcccagttgc
     1261 tgggcgccgt cgaggattcc ggcctgttcg ccgccgccgc cttccgcgct cccgtcaccc
     1321 aggacgccca gggcgggcgc gagcgcttca tgatcggtgc caaatgggaa tgaaccagcg
     1381 ccttgccggc cgcctggggg cggtgggagt cctggcggcg ctggtctgcg tgccggtgtt
     1441 cggcttgatg atgccggtgt tggatcacca tgccggccag caagagcgca tcgcccttct
     1501 ggaaagccaa ttggcgcggc tgaaggccgc cgccgcccag cgcgaggacc tcaagcggca
     1561 acaggccgaa ctggcggcgc ggcggggcaa gagcgggctg ctgctgaccg gcggcagcga
     1621 ggcgctggcg accgcgaccc tgcagaacat gatcaagacg gcggtggcgc gggccggcgg
     1681 cgagttgcgc agcacccagg cgctgccggt gacggcgggg cagggggcgc ggcggctgac
     1741 ggtgcgggcg ctgctgtcca ccgacgtcga gggcctgcgc accttccttc atgccatcga
     1801 ggcggggcgg cccttgctgt tcgtcgatga cctcgacgtc cgtgcccgcc ccggcggtcg
     1861 cgacgacgac ggcgaccggg tggcactgga aatccgggtg gacgtcaccg gctatctggg
     1921 gggcgagtga tgcggcgcct cgtcatcccg gccttcgtgc tggcgggtgc gattgccgcc
     1981 gccgcctcgg cctggcctgc cgacgacccg ccggtggaag tcgccgccag ccggttgccg
     2041 ccgctgccgc ccgcgcccac ctggcaaccg ccgccgatcg atagcttcgc cgagatggtc
     2101 gaacgcccgt tgttcacccc gtcccgccgc ccgccggccc gcaaggtcga ggcggcgatg
     2161 ccgctgaaga cgcccgaggg gcgcctggtc ggggtggtgg tcggcaatgg cgccaaggtg
     2221 gcgctgatcg aggagaccgg cggcaccaag gccatccgcc ggctcaagga aggccagtcc
     2281 ttcgacggat ggatggtggc cgacatcgct cccggccgtg tgctgttgag
//
LOCUS       DATIKR010000074         3391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_37504, whole genome shotgun sequence.
ACCESSION   DATIKR010000074 DATIKR010000000
VERSION     DATIKR010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37504"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /gene="rsmD"
                     /locus_tag="VLL76_01200"
     CDS             <1..532
                     /gene="rsmD"
                     /locus_tag="VLL76_01200"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HSV28132.1"
                     /translation="KGRRLAAPAGRVARPTADRTREALFNILAHSEHVELDGAVVVDC
                     FAGSGGLGLEALSRGAADASFVESHPDSLKALTANIADLREGERATVLRCDATKLPPA
                     RMPCTLALLDAPYNSDLSAPCLLALARQGWLAPGALCVVEVAAKEAFTPPAGFTQVDE
                     RTYGAAKLVFLLAPES"
     gene            complement(654..1100)
                     /locus_tag="VLL76_01205"
     CDS             complement(654..1100)
                     /locus_tag="VLL76_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012083192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HSV28133.1"
                     /translation="MRFVLAMLALLIAAPVAAFAADTVLADPKPGWDNPRRIVLQLTT
                     DDPKRVNGVFHNAINLQKFYGQDNVKVAIVAYGAGVRPLLKQDSPVAERVASLAQYEV
                     EFVACGNTLATMDKKESDLLPGVTVVTAGIAEIVERQIKGWHVVVP"
     gene            1177..2730
                     /locus_tag="VLL76_01210"
     CDS             1177..2730
                     /locus_tag="VLL76_01210"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HSV28134.1"
                     /translation="MQANSSFVQAAYGVALFLVSAAALVLEIVAGRLLAPFVGMSLYT
                     WTAIISVVLAGLTVGHWIGGRQAELAADERSARLRIAVALGLAALTTLAALVVLRLAA
                     APLLGRGWNPIVAIVVLTTLLFLPPSLFAGVISPVLTKLAVDADRNRAARVIGRMYAL
                     GAAGSILGTLAAGYLFISWIGSTGTVLAVAALYAALAIAFVADRRRPAMAAGVVLALG
                     AGGLAAAGNPADAFASPCRVESDYYCLRVEDFRAESGRESAVLVLDHLGHGINDSAEP
                     RLLYSSYLQFSDELAKRRFGTETISAFFIGGGAFTLPRAWAADYDSPNLHVAEIDPAV
                     TALVQRDMWLKPDKIRADHRDARVALQSLPRQPQFDVVFGDAFHDIGIPPHLVTAEFH
                     AEIAARLKPGGFYAINVIEARHEPRFLFALVQTLWRDFKAVEIWVDGDELAQGERLTY
                     LVLSSDTPTDAPALRASRGIPRHWVRLRDDQVRAKVAEAGVPVLTDDFAPVDRLMAHV
                     LLSPEVGER"
     gene            2970..>3391
                     /locus_tag="VLL76_01215"
     CDS             2970..>3391
                     /locus_tag="VLL76_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSV28135.1"
                     /translation="MEVHHPDLTAAAIVALAALLLGVAMTRFKQPAIVGYILAGVVLG
                     PAGLGLVSNRDAISTLAEFGVLMLLFVVGIELDLRRFVQGWKVAVFATILQIAGSVGT
                     ALLLRHVLGWSFGLSMVLGFAVAVSSTAVVIKMLERSG"
BASE COUNT          478 a         1180 c         1130 g          603 t
ORIGIN      
        1 taagggccgc cgcctggccg cccccgccgg ccgcgtcgcc cgccccaccg ccgaccgcac
       61 ccgcgaggcg ctgttcaaca tcctggccca ttccgagcat gtggagctgg acggcgcggt
      121 ggtggtcgat tgcttcgccg gctcgggcgg tttggggctg gaggcgctgt cgcgcggcgc
      181 agccgatgcc agcttcgtgg aaagccatcc cgactcgctg aaggcgctga ccgccaacat
      241 tgccgacctg cgcgagggcg agcgcgccac ggtgctgcgc tgcgacgcca ccaagctgcc
      301 gccggccagg atgccctgca ccctggcgct gctggacgcc ccctacaaca gcgacctgtc
      361 ggcgccgtgc ctgctggcgt tggcccgcca gggctggctg gcaccggggg ccttgtgcgt
      421 ggtcgaggtg gcggccaagg aggcgttcac gccacccgcc ggcttcaccc aggtggacga
      481 acgcacctac ggcgccgcca agctggtgtt cctgctggcg cctgagtcct agagcatttt
      541 tcgctctgac ccgctcagag cggaaaatgc gacaagcccg agcggcgtct gagcctggct
      601 cgccccggag gggcggcaaa gctagagccg gttccatttg aatggaaacg gctctagggc
      661 acgacgacgt gccaaccctt gatctgacgt tcgacgatct cggcgatgcc ggctgtgaca
      721 accgtcacac ccggcagcag atcgctttcc ttcttgtcca tggtcgccag ggtgttgccg
      781 caggcgacga attccacctc gtactgggcc agggacgcca cccgctcggc caccggcgag
      841 tcctgcttca gcagcggccg caccccggcg ccataggcga cgatggcgac cttgacgttg
      901 tcctggccat agaacttctg aaggttgatg gcgttgtgga agaccccgtt gacccgcttg
      961 ggatcatcgg tggtcaattg cagcacgatg cggcgcggat tgtcccagcc gggcttggga
     1021 tcggccaata ccgtgtcggc ggcgaacgcc gccacggggg cggcgatcag cagggcgagc
     1081 atggcgagaa cgaagcgcat gacggatttc cctgataaga aaggttttaa tgatatactt
     1141 tcggccctga tcctgctgcg gaatttttag ttgccgatgc aagcgaattc ttccttcgtc
     1201 caggccgcct atggcgtcgc cctgttcctg gtctccgccg ccgccttggt gctggaaatc
     1261 gtcgccggcc gcctgctggc gcccttcgtc ggcatgagcc tgtacacctg gaccgcgatc
     1321 atttcggtag tgctggccgg gctgacggtc ggccattgga tcggcggccg ccaggcggaa
     1381 ctggccgccg acgaacgctc ggcccgcctg cgcatcgcgg tggcgctggg cttggcggcc
     1441 ctgaccacgc tggcggcgct ggtggtgctg cggctggcgg cggcgccgct gctgggccgg
     1501 ggctggaacc cgatcgtcgc catcgtggtg ctgaccaccc tgctgttcct gccgccgtcg
     1561 ctgttcgccg gcgtgatctc gccggtgctg accaagctgg cggtggacgc cgaccgcaat
     1621 cgcgccgccc gcgtcatcgg ccgcatgtac gcgttgggcg cggcgggcag catcctcggc
     1681 acgctggcgg cgggctatct gttcatctcg tggatcggct cgaccggcac cgtgctggcg
     1741 gtggcggcgt tgtacgccgc gttggccatc gccttcgtcg ccgaccgccg ccgcccggcc
     1801 atggcggcgg gcgtggtgct ggccttgggt gccggcgggc tggcggcggc gggcaacccg
     1861 gccgacgcct tcgcctcgcc ctgccgcgtc gaaagcgact attactgcct gcgggtcgag
     1921 gatttccggg cggaaagcgg ccgcgaaagc gcggtgctgg tgctcgacca tctcggccac
     1981 ggcatcaacg attccgccga gccgcgcctg ctctattcct cgtacctgca attcagcgac
     2041 gaactggcga agcgccgctt cggcaccgag accatttcgg cgttcttcat cggcggcggc
     2101 gccttcaccc tgccgcgcgc ctgggccgcc gattacgaca gccccaattt gcacgtcgcc
     2161 gagatcgacc ccgccgtcac cgccctggtc caacgcgaca tgtggctgaa gccggacaag
     2221 atccgcgccg accaccgcga cgcccgcgtc gccctgcaat cgctgccgcg ccagccgcaa
     2281 ttcgacgtgg tgttcggcga cgccttccac gacatcggca tcccgccgca tctggtcacc
     2341 gccgaattcc acgccgagat cgccgcccgt ctgaagcccg gcggcttcta tgccatcaac
     2401 gtcatcgagg cgcgccacga gccgcgcttc ctgttcgccc tggtccagac cctgtggcgc
     2461 gacttcaagg cggttgagat ctgggtggac ggcgacgaac tggcccaggg cgagcgcctg
     2521 acctatctgg tgctgtccag cgacaccccc accgacgccc ccgccctacg cgccagccgg
     2581 ggcatcccgc gccattgggt gcgcctgcgc gacgaccagg tccgcgccaa ggtggccgag
     2641 gccggcgtgc ccgtgctgac cgacgacttc gccccggtcg accgcctgat ggcgcacgtg
     2701 ctgctgagtc ccgaggtggg ggaacggtga ggtttaacca ccaagacacc aaggacacca
     2761 agagagtccg tcaggaggca ggccgcttgc cacccggcag gccatcttgg tgtccttggt
     2821 gtcttggtgg tgaaaaatcc atggatggac gtctatggta atcccttctc gcgcgcccgc
     2881 cacattgtcg ccaccacttg cggctaaacc cgatttgtaa gtaaatccgt caccccccgc
     2941 gtgggtgcgg ctatctgttt gaggcgccat tggaagtcca ccaccccgac ctgaccgccg
     3001 ccgccatcgt cgccctggcc gccttgttgc tgggcgtcgc gatgacgcgg ttcaagcagc
     3061 ccgccatcgt cggctacatc ctggccggcg tggtgctggg tccggccggg ctggggctgg
     3121 tgtccaaccg cgacgccatt tccacattgg ccgagttcgg cgtgctgatg ctgctgttcg
     3181 tggtcggcat cgagctggac ctgcggcgct tcgtccaggg ctggaaggtg gcagtgttcg
     3241 ccaccatcct ccagatcgcc ggcagcgtcg gcaccgcgtt gctgctgcgc cacgtgctgg
     3301 gctggagctt cggcctgtcc atggtgctgg gcttcgccgt ggcggtgtcg tccaccgccg
     3361 tcgtcatcaa gatgctggaa aggtcgggcg a
//
LOCUS       DATIKR010000075         1802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_122182, whole genome shotgun sequence.
ACCESSION   DATIKR010000075 DATIKR010000000
VERSION     DATIKR010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122182"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VLL76_01220"
     CDS             <1..193
                     /locus_tag="VLL76_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28136.1"
                     /translation="HSVAHDQPLDRPAAAYLPGVVTRRRGDAFRPQQYFFRVGSMVFI
                     ASNIIAVVPILRLIGGRRG"
     gene            277..>1802
                     /gene="leuA"
                     /locus_tag="VLL76_01225"
     CDS             277..>1802
                     /gene="leuA"
                     /locus_tag="VLL76_01225"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSV28137.1"
                     /translation="MMTQASSKYRPYRTIKLTDRRWPDAIITKPPVWCSVDLRDGNQA
                     LIDPMDTGRKMRLWKTLVGMGFKQIEVGFPAASQTDYDFIRHLIDGGHIPADVTIQIL
                     TQAREDLIRRSFEALEGAPNVVVHLYNSTSEVQRRVVFGFDRKGCIDLALAGTRLVRE
                     LSAARKDGEVVFQYSPESFTGTEPDFAVEIVEAVAAEWGAARGREMIVNLPATVEMST
                     PNIYADVIEWFCRTVKGREHLIVSVHPHNDRGTGVAAAELAVMAGADRVEGTLFGNGE
                     RTGNVDICTLALNLFTQGIEPGLDLSDIDTIRRTAEECTQLPVHPRHPYAGELVYTAF
                     SGSHQDAIKKGFTARKKANDPVWEVPYLPIDPADVGRTYEAVIRINSQSGKGGVAYVL
                     ERDHGLELPKSMQAEFARVVQAVADREGRELTPDEIWLFFQRTYLAPGRIQVVDYSTV
                     PVAKNQRALTASLTVDGAEKIIQGIGAGPVDAFVHALEKDMGVVVKVKDYHEHAIGQG
                     S"
BASE COUNT          319 a          615 c          583 g          285 t
ORIGIN      
        1 gcactctgtc gcccatgacc aaccgctcga ccgccctgct gctgcttacc tgcccggtgt
       61 cgtaacacga cgccggggtg acgcgtttcg tccgcagcag tattttttca gggtcggttc
      121 catggtcttc atagcttcca acatcatcgc cgtcgttccc atcctgcgac taatcggcgg
      181 tcgccggggc tgatcgcctg cgcgggcgcc cggtggccga gacgaaggcc gcgcttctca
      241 ccacatgatg aagacgaagc agaaggaacg aaggccatga tgacccaggc ctccagcaag
      301 taccgcccct atcgcaccat caagttgacc gaccgccgct ggcccgacgc aatcatcacc
      361 aagccgccgg tgtggtgcag cgtggatttg cgcgacggca accaggcgct gatcgacccc
      421 atggacaccg gccgcaagat gcggctgtgg aagaccttgg tggggatggg cttcaagcag
      481 atcgaggtcg gctttcccgc cgcgtcgcag accgattacg acttcatccg ccacctgatc
      541 gacggcggcc acattcccgc cgacgtcacc atccagatcc tgacccaggc ccgcgaggat
      601 ttgatccgcc gttcgttcga ggcgctggag ggcgccccca acgtggtggt gcacctgtac
      661 aactcaacct ccgaggtgca gcgccgggtg gtgttcggct tcgaccgcaa gggctgcatc
      721 gatttggccc tggccggcac ccggttggtg cgcgagttgt cggccgcccg caaggacggc
      781 gaggtggtgt tccagtacag cccggaaagc ttcaccggca ccgagcccga cttcgccgtc
      841 gagatcgtcg aggcggtggc ggcggagtgg ggcgccgccc gggggcgcga gatgatcgtg
      901 aacctgccgg ccacggtcga gatgagcacg cccaacatct atgccgacgt catcgagtgg
      961 ttctgccgga cggtgaaggg gcgcgagcat ctgatcgtct ctgtccaccc ccacaacgac
     1021 cgcggcaccg gcgtcgccgc cgccgagttg gcggtgatgg cgggcgccga ccgggtcgag
     1081 ggcaccttgt tcggcaacgg cgagcgcacc ggcaacgtcg acatctgcac cctggccttg
     1141 aacctgttca cgcaagggat cgagccgggc ctggacctgt cggacatcga caccatccgc
     1201 cgcaccgccg aggaatgcac ccagttgccg gtgcatcccc gccatcccta tgccggcgag
     1261 ttggtctaca cggcgttctc gggctcgcac caggacgcca tcaagaaggg cttcaccgcc
     1321 cgcaagaagg ccaacgaccc ggtgtgggaa gtgccctacc tgcccatcga ccccgccgac
     1381 gtcggccgca cctacgaggc ggtgatccgc atcaacagcc agtcgggcaa gggcggcgtg
     1441 gcctatgtgc tggaacgcga ccacgggctg gaattgccca agtccatgca ggcggaattc
     1501 gcccgcgtgg tgcaggcggt ggccgaccgc gagggccgcg agctgacccc cgacgagata
     1561 tggctgttct tccagcgcac ctatctggcg ccgggccgca tccaggtggt ggactactcc
     1621 accgtgccgg tggcgaagaa ccagcgcgcc ctgaccgcca gcctgacggt agacggcgcc
     1681 gagaagatca tccagggcat cggcgccggc ccggtggacg ccttcgtcca cgcgctggaa
     1741 aaggacatgg gcgtcgtggt caaggtcaag gactaccacg aacacgccat cggccagggc
     1801 tc
//
LOCUS       DATIKR010000076         2466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_73897, whole genome shotgun sequence.
ACCESSION   DATIKR010000076 DATIKR010000000
VERSION     DATIKR010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73897"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VLL76_01230"
     CDS             complement(<1..458)
                     /locus_tag="VLL76_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28138.1"
                     /translation="MSLDALVAAEIARPLSAPVTAMAQVLADRVAGAAAVLFYGSNLR
                     SNSLDGVLDFYVLTDRPRVLADRLLPPNVSFAEWGGLRAKVAVMTLADFRRAMRPRAL
                     SPHLWARFCQPVALAWSRDDDASAQVRAALVKAIASAAWWAERLAPPAAEA"
     gene            complement(455..1348)
                     /locus_tag="VLL76_01235"
     CDS             complement(455..1348)
                     /locus_tag="VLL76_01235"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSV28139.1"
                     /translation="MIRLAVIRNPMSRRNQGRPGPGLPFVHQPASPAELAATLARLRD
                     DDTELLAVDGGDGTVREVVTGLVALRWGPRLAILPSGKINLVAGDVGARGLGDIVAAA
                     EDGWDGFAIERRQLLRLDRTGAPPTFGMFLGAAAFTAGWRLANRHLHPRGITSGAAVA
                     AALALTLAGSPGRLSKGVDMEVAIDGHPAPAGRRFLVLATTLDRLALGLWPFWEEGVG
                     GLHVLDIAAPPRRLFAALPALARGRPRPWMREAGYRSGNATSMTIRSDAPVILDGEPF
                     EPGPDRVFRLSAGPVMEFAHP"
     gene            complement(1345..2445)
                     /locus_tag="VLL76_01240"
     CDS             complement(1345..2445)
                     /locus_tag="VLL76_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012522609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSV28140.1"
                     /translation="MPDPRPVARWIGWTPLRVWGLTPPQRLKRSLARAGLRDVAAWPG
                     DPPAGDVLLFLGDVVYDHDLVMALTRSPATLLLVEDRPVAAHVPATLAEAAARALQGD
                     APPEGLALVQPADLVASHRAKLRKREPPVVLEVTARNVRAVEDRLFGASYKGVTDAIT
                     KYLWPAPARLVTRWCAAARIPPNAVTLVGLVLTVLAFLLFRDGWLWAGLAAAWAMTFL
                     DTVDGKLARVTLTSSKAGDVLDHGLDLVHPPFWWWAWWQGAGGGDWDALVVVVAGYAF
                     LRLQEGLFMKAFGFELHVWQRFDSLFRLVTARRNPILAILTIGLALGAPQGAMVAVAA
                     WTFLSLAVHAARILMAARVREEGGQVVSWLDR"
BASE COUNT          380 a          892 c          926 g          268 t
ORIGIN      
        1 gcttcggccg ccggcggcgc caaccgttcg gcccaccacg cggcagacgc gatggccttc
       61 accagcgcgg cgcggacttg ggcggatgcg tcgtcgtcgc ggctccacgc cagcgccacc
      121 ggctggcaga aacgcgccca cagatggggc gacagcgccc ggggccgcat ggcgcggcgg
      181 aagtcggcca gggtcatcac cgccaccttg gcccgcaatc cgccccattc ggcgaaggac
      241 acgttgggcg gcagcaggcg gtcggccagg acgcgcgggc ggtcggtcag gacatagaag
      301 tcgagcacgc cgtcgaggct gttgctgcgc aggttcgagc catagaacag caccgccgcc
      361 gcgccggcaa cgcgatccgc cagcacctgg gccatggcgg tcaccggtgc ggacaggggg
      421 cgggcgatct cggcggcgac cagggcgtcg aggctcatgg gtgggcgaac tccataaccg
      481 ggccggcgga caggcggaag acgcggtcgg ggccgggttc gaacggctcg ccgtccagga
      541 tcaccggcgc gtccgagcgg atggtcatgg aggtcgcgtt gccgctgcga tagccggctt
      601 cgcgcatcca cggccgaggc cggccgcgcg ccagggcggg cagggcggcg aacagccgcc
      661 ggggtggcgc ggcgatgtcc agcacgtgca ggccgccgac gccttcctcc cagaacggcc
      721 acaggcccag cgccagccgg tcgagcgtgg tcgccagcac caggaagcgg cggccggccg
      781 gcgcggggtg gccgtcgatg gccacctcca tgtcgactcc cttcgacagc cggccgggac
      841 tgccggccag ggtcagcgcc agggcggcgg cgacggcggc gccgctggtg atgccgcgcg
      901 gatgcaggtg gcggttggcg aggcgccagc cggcggtgaa ggcggcggcc cccaggaaca
      961 tgccgaaggt gggcggcgcg cccgttcggt cgagccgcag caactggcgc cgctcgatgg
     1021 cgaagccgtc ccagccgtcc tcggccgctg cgacgatgtc gcccaggccc cgcgccccca
     1081 cgtcgccagc caccagattg atcttgcccg acggcaggat tgcgaggcgc ggcccccagc
     1141 gcagcgccac cagcccggtc accacctcgc gcacggtgcc gtcgccgccg tccaccgcca
     1201 gcaattcggt gtcgtcgtcg cgcagccgcg ccagggtggc ggccagttcg gcgggcgagg
     1261 cgggctggtg cacgaacggc aagccggggc cggggcggcc ctggttgcgg cggctcatgg
     1321 ggttgcggat gacggcgagg cggatcatcg atcgagccac gagacgacct gcccgccctc
     1381 ctcgcgcacg cgggccgcca tcaggatgcg ggcggcatgc accgccagcg acaggaacgt
     1441 ccacgccgcc accgccacca tggcaccttg cggcgccccc agggccaggc cgatggtcag
     1501 gatggcgagg atgggattgc gccgcgccgt caccagccgg aacaggctgt cgaagcgctg
     1561 ccagacatgc agctcgaagc cgaacgcctt catgaacaac ccctcctgca ggcgcaggaa
     1621 agcatagccg gccaccacca ccaccagggc gtcccaatcg ccgccgccgg caccctgcca
     1681 ccacgcccac caccagaatg gcgggtggac gaggtcgagg ccgtggtcca gcacgtcgcc
     1741 cgccttggac gaggtcagcg tcacccgcgc cagcttgccg tccacggtat cgaggaaggt
     1801 catcgcccag gcggcggcaa ggcccgccca cagccagccg tcgcgaaaca gcaggaaggc
     1861 gagcaccgtc agcaccaggc cgaccagggt gacggcgttg ggcgggatgc gggcggcagc
     1921 gcaccagcgc gtcaccagcc gggccggcgc cggccagagg tatttggtga tggcgtcggt
     1981 gactcccttg tagctggcgc cgaacagccg gtcctcgacg gcgcggacgt tccgggccgt
     2041 gacctcgagc accaccggcg gctcgcgctt gcgcagcttg gcgcggtggg acgccaccag
     2101 atcggcgggc tggacgagtg ccagcccctc gggcggcgcg tcgccttgca gggcgcgggc
     2161 ggcggcctcg gccaaagttg cggggacatg ggcggcgacc gggcggtcct cgaccagcag
     2221 caaggtggct ggcgagcgcg tcagcgccat caccagatcg tggtcgtaga ccacgtcgcc
     2281 caggaacagc agcacgtcgc ccgccggggg atcgcccggc caggcggcga cgtcgcgcaa
     2341 tccggcgcgc gccagcgacc gcttcagccg ctgcggcggg gtcagccccc agacacgcaa
     2401 cggggtccat ccaatccagc gggcgacggg gcgggggtcg ggcatggctc aatcgataca
     2461 cgggct
//
LOCUS       DATIKR010000077         1557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_231022, whole genome shotgun sequence.
ACCESSION   DATIKR010000077 DATIKR010000000
VERSION     DATIKR010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231022"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VLL76_01245"
     CDS             complement(<1..664)
                     /locus_tag="VLL76_01245"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HSV28141.1"
                     /translation="MLLAIDSGNTNIVFAVFDGEQVRGEWRASTDTDRTADELGVWLM
                     QLLTIEGLKREDITACIIASVVPAMVFGLKTLCRRYFACEPVVVGDDGVVLGINVLLD
                     RPEEVGADRLVNAVAAHGSYKGPLIVIDFGTATTFDVVDRDGNYCGGAIAPGINLSLE
                     ALHMAAAKLPRVAIGRPKQVIGKATVPAMQSGIFWGYVGMIEGLVTRIREEYGAPMQV
                     VAT"
     gene            complement(682..1422)
                     /locus_tag="VLL76_01250"
     CDS             complement(682..1422)
                     /locus_tag="VLL76_01250"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HSV28142.1"
                     /translation="MTTTDLPAPFSHIRLDSVGSTNDEIRRLALSGAAADFLVVSAIS
                     QSAGRGRRGRAWVSPAGNLHFSMLLAVDGLATAAQLGFAAAIAIVEALTDLVPGARFT
                     AKWPNDVLMDGRKVAGMLLEPVGENWLVLGIGIDVAACPPPDAVLYPVAALAHAGFAG
                     TDLDVLAAFCARFAPWVGRWRAEGFGPVRDAWVACARGIGAPVVVRLDGETLTGLFAG
                     LDAEGALLLDAGSNVRRVMAGDVYFPPA"
BASE COUNT          270 a          552 c          530 g          205 t
ORIGIN      
        1 cggtggcaac cacctgcatg ggggcgccgt attcctcgcg gatgcgggtg accaggcctt
       61 cgatcatgcc gacatagccc cagaagatgc ccgattgcat ggccgggacg gtggccttgc
      121 cgatcacctg cttgggccgg ccgatggcga cgcgcggcag tttggccgcc gccatgtgca
      181 gcgcctccag cgacaggttg atgccgggcg cgatggcgcc gccgcaataa ttgccgtcgc
      241 ggtccaccac gtcgaaggtg gtggcggtgc cgaaatcgat gacgatcagc ggccccttgt
      301 aggaaccatg cgccgccacc gcgttgacca gacggtcggc gcccacttcc tcggggcggt
      361 ccagcagcac gttgatgccg aggacaacgc catcgtcacc caccaccacc ggctcgcagg
      421 cgaaatagcg gcggcacagg gttttcaggc cgaacaccat ggccggcacc acgctggcga
      481 tgatgcaggc ggtgatgtcc tcgcgcttca gcccctcgat ggtcagaagc tgcatcagcc
      541 acacgcccag ttcgtcggcg gtgcggtcgg tgtcggtcga ggcgcgccat tcgcccctca
      601 cctgctcgcc gtcaaacacg gcgaagacga tgttggtgtt gcccgagtcg atggccagaa
      661 gcatggacct ctcccgtacc gtcaggccgg agggaaatag acgtcccccg ccatgacgcg
      721 ccgcacattg gagcctgcat ccaaaagaag tgcgccctcc gcgtcaagcc ccgcgaacag
      781 cccggtcagc gtttctccgt ccagtcgcac caccaccggg gcgccgatgc cgcgggcaca
      841 ggccacccag gcgtcgcgca cggggccgaa gccctcggcc cgccagcgcc ccacccaggg
      901 cgcgaaacgg gcgcagaagg ccgccagcac gtcgaggtcg gtgccggcga acccggcatg
      961 ggccaaggcc gcgacgggat agagcacggc atcgggcggc ggacaggcgg cgacgtcgat
     1021 tccgatgccc agcaccagcc agttctctcc caccggctcc agcagcatgc cggccacctt
     1081 gcggccgtcc atcagcacgt cgttgggcca tttggcggtg aagcgggcgc cgggcaccag
     1141 atcggtcagc gcctcgacga tggcgatcgc tgcggcgaag cccagttgcg cggcggtcgc
     1201 caggccatcc accgccagca gcatggagaa atgcaaattg cccgccgggc tgacccaggc
     1261 gcggccgcgc cggcccctgc ccgcgctttg gctgatggcg gacaccacaa ggaaatcggc
     1321 ggcggcaccc gaaagcgcca gccgccgtat ctcgtcgttg gtgctgccga cgctgtccag
     1381 ccggatgtgg ctgaacggcg ccggcaggtc ggtggtcgtc atcccgcagg gaacagcgcg
     1441 gcggccgcgg ccttggccga ggtcaacagc gggccgggga cgaaggacag cagcaccacc
     1501 agggcggtcg aggccagcat gaccacgcgc acggcgcggc caaccgggcg gtcgaac
//
LOCUS       DATIKR010000078         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_122224, whole genome shotgun sequence.
ACCESSION   DATIKR010000078 DATIKR010000000
VERSION     DATIKR010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122224"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1597
                     /locus_tag="VLL76_01255"
     CDS             <1..1597
                     /locus_tag="VLL76_01255"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HSV28143.1"
                     /translation="VEYERIGEVFGRILSYAQLHYAGDVADAARGRFLQGMQERVTDI
                     STHTLFFTLELNRLSDKELEQKLTADRAAHYASWLRDVRAFRDHQLSDELERMLHEKS
                     VAGRAAWNRLFDETMARLRFPFRDQTMTSAEVLHLMSDRDATVRRDAAKSVGKVLGEN
                     APLFALITNTLAKDKEIEDKWRGYARPQSYRNLSNQVEDEVVDALVAAVKGCYGQLSH
                     RYYALKAKWFGVDQLEYWDRNAPLPDDSDRTFTWEQARDTVLSAYERFSPELAGVGRT
                     FFDKNWIDAPVRPGKSPGAFAHPTVPSAHPYLLVNFLGKTRDVMTLAHELGHGVHQVL
                     AAGQGALMADTPLTLAETASVFGEMLTFQSMLAAETDPVRKKAMLAGKVEDMLNTVVR
                     QIAFYEFERMVHEERRRGELAPDRIGELWMQVQTESLGPALRFHDEYKAFWTYIPHFI
                     HSPFYVYAYAFGDCLVNSLYSVYRSGAVPGFEGKYLEMLRAGGTLRHKELLKPFGLDA
                     GDPAFWRKGLEVVVGFIDELEKM"
BASE COUNT          277 a          549 c          537 g          264 t
ORIGIN      
        1 cgtcgagtac gagcggatcg gcgaggtgtt cggccgcatc ctgtcctacg cccagttgca
       61 ttatgccggc gacgtcgccg acgccgcgcg cggccgcttc ctccagggga tgcaggaacg
      121 ggtcaccgac atctcgaccc acaccctgtt cttcacgctg gagctcaacc gcctcagcga
      181 caaggagctg gagcagaagc tgaccgccga cagggcggcc cattacgcct cgtggctgcg
      241 cgacgtccgc gccttccgcg accaccagct ttccgacgag ctcgagcgca tgctgcacga
      301 gaagtcggtg gccgggcgcg ccgcctggaa ccgcctgttc gacgagacca tggcgcggct
      361 gcgcttcccg ttccgcgacc agaccatgac ctcggccgaa gtgctgcatc tgatgagcga
      421 ccgtgacgcc accgttcgcc gcgacgccgc caagtcggtg ggcaaggtgc tgggcgagaa
      481 tgcgccgctg ttcgccctga tcaccaacac cctggccaag gacaaggaga tcgaggacaa
      541 gtggcgcggc tatgcccgcc cgcaatccta tcgcaacttg tccaaccagg tggaagacga
      601 ggtggtcgac gccctggtgg cggcggtcaa gggctgctac ggccagctca gccaccgcta
      661 ttacgcgctc aaggccaagt ggttcggcgt cgaccagttg gaatactggg accgcaacgc
      721 gccgctgccc gacgacagcg accgcacctt cacctgggag caggcgcgcg acacggtgct
      781 gtcggcctat gagcgcttca gccccgaact ggccggggtg ggccgcacct tcttcgacaa
      841 gaactggatc gacgcccccg tccgccccgg caagtcgccg ggagccttcg cccatccgac
      901 cgtgccgtcg gcgcatccct acctgctggt caacttcctg ggcaagaccc gcgacgtcat
      961 gaccctggcc cacgaactgg gccacggcgt ccaccaggtg ctggcggcgg ggcagggcgc
     1021 cctgatggcc gacaccccgt tgacgctggc cgagacggct tcggtgttcg gcgagatgct
     1081 gaccttccag tccatgctgg cggccgagac cgacccggtg cgcaagaagg ccatgctggc
     1141 cggcaaggtc gaggacatgc tcaacaccgt ggtgcgccag atcgcattct acgagttcga
     1201 gcgcatggtc cacgaggagc gccgccgcgg cgaactcgcc cccgaccgca tcggcgagct
     1261 gtggatgcag gtgcagaccg aaagcctggg gccggcgctg cggttccatg acgagtacaa
     1321 ggcgttctgg acctacatcc cgcatttcat ccattcgccg ttctacgtct acgcctatgc
     1381 gttcggcgat tgcctggtga actcgctgta ctcggtctac cgctcggggg cggtgccggg
     1441 tttcgagggc aagtacctgg agatgctgag ggccggcggc acgttgcggc acaaggaatt
     1501 gctgaagccg ttcggcctgg acgccggcga ccctgccttc tggcgcaagg gcctggaggt
     1561 ggtggtggga ttcatcgacg aactggagaa gatgtgattg aactccctcc cctgccgtag
     1621 gcggggg
//
LOCUS       DATIKR010000079         2582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_158445, whole genome shotgun sequence.
ACCESSION   DATIKR010000079 DATIKR010000000
VERSION     DATIKR010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158445"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VLL76_01260"
     CDS             <1..536
                     /locus_tag="VLL76_01260"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HSV28144.1"
                     /translation="ALLGAEYDQAKEIAAEAAQGEVCEAANDNAPGQVVVSGHKTAVE
                     RAIKIAADKGIKRAVLLPVSAPFHCALMQPAADAMAEALAGVTMNAPKVPLVANVVAS
                     QVTDPAEIRDLLVKQVTGTVRWREGVLYMKEQGVSGLVELGAGKVLGGLAKRIDKEIA
                     GTSVGTPADIEAFLASI"
     gene            551..1288
                     /gene="fabG"
                     /locus_tag="VLL76_01265"
     CDS             551..1288
                     /gene="fabG"
                     /locus_tag="VLL76_01265"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HSV28145.1"
                     /translation="MFDLTGKTALVTGASGGIGGAIAKALHGAGATVAIHGTRREALD
                     ALAAELKERVHVLPANLSKPEEVEQLAKDAEAAMGSLDILVNNAGITKDTLVLRMKDE
                     DWDQVLNVNLTAAFRLCRAAVKGMMKRRSGRIVNITSIVGVTGNPGQVNYAASKAGMI
                     GMSKSLAQEVASRGVTVNCVAPGFIATAMTDELNDEQKARVMTAIPMGRMGTSEDIAA
                     AVLYLASDAGAYVTGQTLHVNGGMAMP"
     gene            1451..1687
                     /locus_tag="VLL76_01270"
     CDS             1451..1687
                     /locus_tag="VLL76_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSV28146.1"
                     /translation="MSDVAERVKKIVVEHLGVEEAKVTENASFIDDLGADSLDTVELV
                     MAFEEEFGCEIPDDAAEKILTVKDAIDFISKNSN"
     gene            1756..>2582
                     /locus_tag="VLL76_01275"
     CDS             1756..>2582
                     /locus_tag="VLL76_01275"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HSV28147.1"
                     /translation="MRRVVVTGMGLVSPLGCGVEHNWKRLINSESGIRVIDHFEVSDL
                     AAKVAGVIPRGTGEGEFDADKVAPAKDRRRMDDFIVYGLAAAIEAIEDSGWMPEDDES
                     RERTGVMIGSGIGGLPAIAEGALVLKESGPRRVSPFFIPSALINLVSGHVSIKYGFKG
                     PNHAVVTACATGAHALGDAARLIMFGDADVMVAGGAESAVCRLGIAGFAAAKALCTSY
                     NDRPTEASRPWDKDRDGFVMGEGAGIVVLEEYEHAKARGAKIYGEVVGYGMSGDAYH"
BASE COUNT          459 a          870 c          863 g          390 t
ORIGIN      
        1 ccgcgctgct gggcgccgaa tacgaccagg ccaaggagat cgccgccgaa gccgcccagg
       61 gcgaggtgtg cgaggccgcc aacgacaacg cccccggcca ggtggtggtg tcgggccaca
      121 agaccgccgt cgagcgcgcc atcaagatcg ccgccgacaa gggcatcaag cgcgccgtgc
      181 tgctgccggt gtccgccccc ttccattgcg ccctgatgca gcccgccgcc gacgccatgg
      241 ccgaagcgct ggccggcgtg accatgaacg cccccaaggt gccgctggtc gccaacgtgg
      301 tggcctcgca ggtcaccgac ccggccgaga tccgcgacct gctggtcaag caggtcaccg
      361 gcaccgtgcg ctggcgcgag ggcgtgctct atatgaagga gcagggcgtc tccggcctgg
      421 tcgaactggg cgccggcaag gtgctgggcg gcctggccaa gcgcatcgac aaggaaatcg
      481 ccggaacctc ggtcggcacc cccgccgaca tcgaggcctt cctggcgtcc atttgaagag
      541 gggaccacac atgttcgatc tgaccggcaa gacggcgctg gtgaccggtg cctcgggcgg
      601 catcggcggc gccatcgcca aggcgctgca cggcgcgggt gccactgtcg ccatccacgg
      661 cacccgccgc gaggcgctcg acgccctggc ggccgagctg aaggagcggg tgcacgtgct
      721 gcccgccaac ctgtccaagc ccgaagaggt cgagcaattg gccaaggacg ccgaggcggc
      781 catgggctcg ctcgacatcc tggtcaacaa tgccggcatc accaaggaca ccctggtgct
      841 gcgcatgaag gacgaggact gggaccaggt gctgaacgtc aacctgaccg ccgccttccg
      901 cctgtgccgc gccgcggtca agggcatgat gaagcgccgc tcgggccgca tcgtcaacat
      961 cacctcgatc gtcggcgtca ccggcaatcc gggccaggtc aattacgcgg cctcgaaggc
     1021 cggcatgatc ggcatgtcca agtcgctggc ccaggaagtg gccagccgtg gcgtcaccgt
     1081 caattgcgtc gcccccggct tcatcgccac cgccatgacc gacgagctca acgacgagca
     1141 gaaggcccgc gtgatgaccg ccatccccat gggccgcatg ggcaccagcg aggacatcgc
     1201 ggccgccgtg ctgtacctcg ccagcgacgc cggcgcctac gtcaccggcc agacgctgca
     1261 cgtcaacggc ggcatggcca tgccgtgatg cccctgcagg cgccccatac cgcaacaact
     1321 ggtattgggg cgctggtcaa ggggcgaaaa gtgtgttagg tacgggccac tttccgccgg
     1381 acggggggct cgccgccctg ggcgtgaaaa ccgggttatt ccatcgctac agacttccga
     1441 gggacataaa atgagcgacg tcgccgagcg ggttaagaag attgtcgtcg agcacctggg
     1501 cgttgaagag gccaaggtga ccgagaacgc cagcttcatc gacgacctgg gcgccgacag
     1561 cctcgacacc gtcgagctgg tcatggcctt cgaggaagaa ttcggctgcg aaatccccga
     1621 tgacgccgcc gagaagatcc tgaccgtcaa ggacgcgatc gacttcatct cgaagaacag
     1681 caactaaggt tgccaggggg gcgtcggtcc tgacgggtcg gcgcccttag tctaggtaca
     1741 gaacgggaca gtttcatgag acgtgtcgtc gtcaccggca tgggcctggt ctcccctctg
     1801 gggtgcgggg tcgagcacaa ttggaagcgc ctgatcaatt ccgaatccgg cattcgggtt
     1861 atcgaccatt tcgaggtgtc cgatcttgcg gccaaggtcg cgggcgtgat cccgcgcggc
     1921 accggcgaag gtgagttcga cgccgacaag gtggcgcccg ccaaggatcg ccgccgcatg
     1981 gacgatttca tcgtctacgg ccttgccgcc gccatcgagg cgatcgagga ttcgggctgg
     2041 atgcccgagg acgacgaatc gcgcgaacgc accggcgtga tgatcggttc cggcatcggc
     2101 ggcctgcccg ccatcgccga gggcgccctg gttctgaagg aatcgggtcc gcgccgcgtc
     2161 agcccgttct tcattccgtc ggcgctgatc aacctggtct cgggccacgt ctcgatcaaa
     2221 tacggtttca agggccccaa ccatgccgtg gtcacggcct gcgccaccgg tgcccacgcg
     2281 ctgggtgacg ccgcccgcct gatcatgttc ggcgacgccg acgtgatggt cgcgggtggt
     2341 gccgaatccg ccgtgtgccg cctgggcatc gccggcttcg ccgccgccaa ggccctgtgc
     2401 accagctaca acgaccgccc gaccgaggct tcgcgcccct gggacaagga ccgtgacggc
     2461 ttcgtcatgg gcgagggcgc cggcatcgtg gtgctggaag agtacgagca tgccaaggcc
     2521 cgcggcgcca agatctatgg cgaagtggtc ggctacggca tgtcgggcga cgcctatcac
     2581 at
//
LOCUS       DATIKR010000080         1684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_158448, whole genome shotgun sequence.
ACCESSION   DATIKR010000080 DATIKR010000000
VERSION     DATIKR010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158448"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VLL76_01280"
     CDS             complement(<1..330)
                     /locus_tag="VLL76_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28148.1"
                     /translation="MFDVNQQAFALAHVIDEAHMVSGRSRDAAKLCRQYMEAYLADKR
                     VQTLIGDWKIVWGPQVFHEWFDSRTDNAMAVMANGQTTVVAIASTNPKSLYDWLVEDG
                     DVAFTKDW"
     gene            509..1588
                     /locus_tag="VLL76_01285"
     CDS             509..1588
                     /locus_tag="VLL76_01285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28149.1"
                     /translation="MRPAIPVVQGKTQDLLQAHLSAARALMATARRMYTPVGVRVADR
                     VSRAWMERTGNPLLPELDALAAIVGEPGLHLLNASYEWGCTTGVSGGVLLRTLDWPFS
                     GLGRHVAVLDTEGAAGRYLSVTWPGFAGVLTAMAPGRFAVAINQAKAFHGWVTGALEW
                     PVNRWRMLRSPHLPPAHLLRKVCDEAPDYATALRMLTETPICLPVFFTIAGPNGEGAV
                     IEREPARAHVHPGPAACANHWHYPGLQGTAPRLTCRLDRTSGYGGMSHVRHATMLENL
                     GATEDFRWLQPPVLCRLTRLACVMDPGAGSMSVMGLEGGQQATEILQWQPDSEQSGEA
                     RIVAKPPGWRPANEGHEQSTTHSLG"
BASE COUNT          273 a          574 c          549 g          288 t
ORIGIN      
        1 ccagtccttg gtgaaggcga cgtcgccgtc ctcgaccagc cagtcgtaca gcgacttggg
       61 gttggtcgag gcgatggcga ccaccgtggt ctggccgttg gccatgaccg ccatggcgtt
      121 gtcggtacgg gaatcgaacc attcatggaa aacctgcggc ccccacacga tcttccaatc
      181 gccgatcagc gtctgcaccc gcttgtcggc cagataggcc tccatgtact ggcggcacag
      241 cttggcggca tcgcgcgaac ggccgctgac catgtgggcc tcgtcgatga catgggccag
      301 ggcgaaggcc tgctggttga cgtcgaacat gcggaagctt ccccctatcg gcgcgctttg
      361 ttggtgaaat gcgcgtagtg cgggcaaagc taaaacatct cgcggcgctt tgcgataggg
      421 taaataaccc accttatcgt gaatgaacgt tcactctcgc ttcatcccgt gctatcgttc
      481 tttcatcgat cgcgaccaaa ggtgtcccat gcgtcccgcc atccccgtcg tccagggcaa
      541 gacccaggat ctgctgcaag cccatctgtc cgccgcccgt gccttgatgg cgacggcgcg
      601 gcggatgtac acgcccgtgg gcgtgcgggt tgccgaccgg gtgtcgcgcg cctggatgga
      661 gcgcaccggc aacccgctgc tgcccgaact cgacgctttg gccgccatcg tcggcgagcc
      721 gggcctgcac ctgctcaacg ccagctacga atggggctgc accaccggcg tgtcgggcgg
      781 cgtgctgctg cgcacgctgg attggccgtt ctcggggctg ggccggcatg tggcggtgct
      841 cgacaccgaa ggggcggccg ggcgttatct gtcggtgacg tggccgggct tcgccggggt
      901 gctgaccgcc atggcgccgg gccgcttcgc cgtcgccatc aaccaggcca aggcgttcca
      961 cggctgggtc accggcgcgc tggaatggcc ggtcaaccgc tggcgcatgc tgcgctcgcc
     1021 ccacctgccg ccggcccatc tgctgcgcaa ggtgtgcgac gaggcgccgg actacgccac
     1081 cgcgctccgg atgctgaccg agacgccgat ctgcctgccg gttttcttca ccatcgccgg
     1141 gccgaacggc gagggcgcgg tgatcgagcg cgaaccggcc cgcgcccacg tccatcccgg
     1201 ccctgccgcc tgcgccaacc actggcatta tcccgggctg caaggcaccg ccccgcgcct
     1261 gacctgccgc ctcgaccgca ccagcggcta tggcggcatg tcgcacgtcc gccacgccac
     1321 catgctggag aacctggggg ccaccgaaga tttccgctgg ctgcagccgc cggtcctgtg
     1381 ccggctgacc cgactggcct gcgtcatgga cccgggcgcc ggaagcatgt cggtgatggg
     1441 ccttgaaggc ggccagcaag ccaccgaaat cctgcaatgg cagcccgatt cagagcaatc
     1501 gggggaagcc cgcatcgtag ccaagccacc ggggtggcgc ccggcgaatg agggccatga
     1561 acaaagcaca acccactcct tgggatagat gcaggccgcg aaaaggtata ggctttcccc
     1621 ctccgccgcc gtgtgtggcg gtgcagcatc ggatcgttta gaatagtgga cgtcatgagc
     1681 aatt
//
LOCUS       DATIKR010000081         4750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_231098, whole genome shotgun sequence.
ACCESSION   DATIKR010000081 DATIKR010000000
VERSION     DATIKR010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231098"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VLL76_01290"
     CDS             <1..690
                     /locus_tag="VLL76_01290"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HSV28150.1"
                     /translation="DGVYTTDPRIVTKAKKLDKITYEEMLELASVGAKVLQTRSVEMA
                     MKHRVRVQVLSSFEDKPGTLVCDEDEIVEKELVSGIAYSRDEAKITLVKVPDRPGVAA
                     SIFGPLAEAAINVDMIVQNVSEDGKSTDLTFTVGKADLEKAKKVIEDAKLGYEKLVAD
                     ANVVKVSVIGVGMRSHAGISHRMFQTLASEGINIQVISTSEIKISVLIEEKYTELALR
                     ALHTAYDLDAA"
     gene            713..1747
                     /locus_tag="VLL76_01295"
     CDS             713..1747
                     /locus_tag="VLL76_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSV28151.1"
                     /translation="MSDARKRLDQLWAKGREFLGCDVAIMGGAMSWISERHLVSAISN
                     AGGFGVIACGSMNPDQLADEIAATQEATARPFGVNIITMHPELDRLIDVCGELSVSHI
                     VLAGGLPSTAAIKRAKDTGAKVICFAPALVLAKKLLRSGVDALVIEGTEAGGHIGPVA
                     TSVLAQEILPEIRDVPVFVAGGIGRGEAIVSYLEMGAAGVQLGTRFVCASECVAHPNF
                     KQAFIRAAARDAVPTVQVDPAFPVIPVRALGNAGTKRFIEFQHEVIGRFRKGEIEQKE
                     AQLEIEHFWAGALRRAVIEGDVENGSVMAGQSVGLVTREQPTAEILAELVQQAVAALE
                     ARPARELQGV"
     gene            1747..4011
                     /gene="ptsP"
                     /locus_tag="VLL76_01300"
     CDS             1747..4011
                     /gene="ptsP"
                     /locus_tag="VLL76_01300"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HSV28152.1"
                     /translation="MQAAAPSVSRRLLARLRDVMAGGGTAEERLEKVVRLIAADMVAE
                     VCSCYVMRAGEVLELFATEGLKKTSVHKTRLRVGEGLVGDIAAHARHLALADAQAHPL
                     FAYRPETGEEIFHSLMGVPIIRSGRVIGVLVVQNRTMRHYTDEEIETLETVAMVLAEL
                     VASGELVNKDELVPVDGNALLPLRLEGMRLNAGVGIGVAVLHQPRITIRRLVAEDPEV
                     ETERLKTALAGVKSALDELFSRPEMGDGEHRDVLETYRMFAEDKGWIARIGEAIRTGL
                     TAEAAVQKVHDDMRARMSQITDPYLRERVHDFEDLANRLLQHLSAGEEAPVRGELPSD
                     AILVARSMGPMDLFDYDPKRLRGLVLEEGSPTMHVAIVARALDIPVVGRCKEVLDKVE
                     PYDPVIVDGDNAQVFLRPSEDIKDIFNDALKQRQQRAAVYARLRDLPAITRDGIQVSL
                     NMNAGLLLDLQHLHESGADGIGLYRTELPFMARSALPDVHAQTILYNKILDQAEGKPV
                     VFRSLDVGGDKVLPYWNPSEEDNPALGWRSIRITLDRPAVMRHQLRALLRAAAGRELS
                     VMFPMIAEVAELVQARRILDMEVEHERRAGHVLPQRIRVGTMLEVPALAFQMDALLPL
                     VDFISIGSNDLGQFLFAVDRGNPRIAERYDPLAPAMLNFIRFIAAKCAESGVALSVCG
                     EMAGRPLEAMALIACGVRTLSVSSPSIGPVKTMIRSLEVQPVRDYLDGLLTSPSRSLR
                     NKLKLFAIDHGVVL"
     gene            4133..>4750
                     /locus_tag="VLL76_01305"
     CDS             4133..>4750
                     /locus_tag="VLL76_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV28153.1"
                     /translation="MPSDQDAAVTVEPQAALTTSVGKTLKSARERTGKDLTEVATQLR
                     IRQPFLEALEDGRHKDLPGGTYAVGFLRTYAEFLNLDGEEMVRRFRMEAAGELNARAE
                     LVFPSPVSEGRIPGGAVLFVGMVLAGIGYGAWYWLSSKDAAVADMVPALPDRLAGALQ
                     RAQPQPEVKPAEPAAAPAAEVKPEEPKPEGEAKPAANEVVPPAEDD"
BASE COUNT          792 a         1629 c         1591 g          738 t
ORIGIN      
        1 gacggcgtct acacgaccga cccgcgcatc gtgaccaagg ccaagaagct cgataagatc
       61 acctacgagg aaatgctgga gctggcctcg gtgggcgcca aggtcctgca gacccgttcg
      121 gtcgagatgg ccatgaagca ccgggtgcgc gtgcaggttc tgtcgagctt cgaggacaag
      181 cccggtactc tcgtttgcga tgaggatgag atcgtggaaa aggaattggt gagcggcatc
      241 gcctatagcc gcgacgaagc gaagatcacc ctggtgaagg tccccgaccg tcccggcgtc
      301 gccgcctcga tcttcggccc gctggccgaa gcggccatca acgtggacat gatcgtccag
      361 aacgtgtccg aggacggcaa gtccaccgac ctgaccttca ctgtcggcaa ggccgacctc
      421 gagaaggcca agaaggtgat cgaggacgcc aagctgggct atgagaagct ggtggccgac
      481 gccaacgtgg tgaaggtgtc ggtgatcggc gtcggcatgc gctcgcacgc cggcatctcg
      541 caccgcatgt tccagaccct ggcgtccgag ggcatcaaca tccaggtcat ctcgacctcg
      601 gagatcaaga tcagcgtgct gatcgaagag aagtacaccg agttggcgct gcgtgcactc
      661 cacaccgcct acgatttgga cgcggcctga catcaggctt gctgggggta gaatgagcga
      721 cgcgcgtaag cggctcgacc aattgtgggc aaaggggcgc gagttcctgg gctgtgacgt
      781 cgccatcatg ggcggcgcca tgtcctggat ttccgagcgc catctggtat ccgccatctc
      841 taatgccggc ggtttcggcg tcatcgcctg cgggtcgatg aatccggacc aactggcgga
      901 cgagatcgcg gcgacccagg aggcgaccgc caggccgttc ggcgtcaaca tcatcaccat
      961 gcatcccgag ctcgaccgcc tgatcgacgt ctgcggcgag ctttcggtca gtcatatcgt
     1021 gctggcgggc ggcctgccct cgacggcggc gatcaagcgg gccaaggaca ccggcgccaa
     1081 ggtgatctgc ttcgcgccgg ctctggtgct ggcgaagaag cttttgcgct cgggcgtgga
     1141 cgccctggtc atcgagggca ccgaggccgg cggtcatatc ggcccggtgg cgaccagcgt
     1201 gctggcccag gagatcctgc ccgagatccg cgacgtcccg gtcttcgtgg ccggcggcat
     1261 cggccgtggc gaggccatcg tcagctatct cgaaatgggc gccgccggcg tgcaactcgg
     1321 cacccgcttc gtctgcgcca gcgaatgcgt ggcccatcct aatttcaagc aggcgttcat
     1381 ccgcgccgcc gcccgcgacg cggtgccgac cgtccaggtc gaccccgcct tcccggtcat
     1441 cccggtgcgg gcgctgggca acgcgggcac caagcgcttc atcgaattcc agcacgaggt
     1501 catcggccgc ttccgcaagg gcgagatcga gcagaaggaa gcgcagctcg agatcgagca
     1561 tttctgggcc ggcgccctgc gccgcgcggt gatcgagggc gacgtcgaga acggttcggt
     1621 gatggccggc cagagcgtcg gcctggtgac ccgcgaacag cccacggccg agattctggc
     1681 cgagctggtg caacaggccg tggcggcgct cgaagcccgc cccgcccgcg aacttcaggg
     1741 cgtgtgatgc aggcggcggc gccatcggtc tcgcggcgcc tgctggcgcg cctgcgcgac
     1801 gtgatggcgg gcggcggcac cgccgaggaa cgcctggaaa aggtggtccg cctgatcgcc
     1861 gccgacatgg tcgccgaagt gtgctcgtgc tacgtcatgc gcgccggcga agtgctggaa
     1921 ttgttcgcca ccgaaggcct gaagaagact tcggtgcaca agacccgcct gcgggtcggc
     1981 gaaggcctgg tcggcgacat cgcggcccat gcccgccacc tcgccctggc cgacgcccag
     2041 gcccacccgc tgttcgccta tcgccccgag accggcgagg aaatcttcca ttcgctgatg
     2101 ggcgtgccca tcatccgcag cggtcgcgtc atcggcgtcc tggtggtgca gaaccgcacc
     2161 atgcggcact acaccgacga agagatcgag acgctcgaga ccgtcgccat ggtgctggcc
     2221 gagttggtgg cctcgggcga gctggtcaac aaggacgagc tggttccggt cgatggcaac
     2281 gcgctgctgc cgctgcgcct ggaaggcatg cgcctgaatg ccggcgtcgg catcggcgtc
     2341 gccgtgctgc accagccccg catcaccatc cgccgcctgg tcgccgagga ccccgaggtc
     2401 gagaccgagc gcctgaagac cgccctggcc ggcgtgaaaa gcgcgctgga cgagctgttc
     2461 tcacgccccg agatgggcga cggcgagcac cgcgacgtgc tggaaaccta tcgcatgttc
     2521 gccgaggaca agggctggat cgcccgcatc ggcgaagcca tccgcaccgg cctgaccgcc
     2581 gaggccgccg tgcagaaggt gcacgatgac atgcgtgcgc gcatgagcca gatcaccgat
     2641 ccgtatctgc gcgaacgcgt ccacgatttc gaggacctgg ccaaccgcct gctgcagcat
     2701 ttgtcggcgg gcgaggaagc cccggtgcgc ggcgagctgc cgtccgacgc catcctggtg
     2761 gcccgctcga tggggcccat ggacctgttc gactacgacc ccaagcggct gcgcggtctg
     2821 gtgctggaag agggctcgcc caccatgcac gtcgccattg tggcgcgcgc gctggacatc
     2881 ccggtggtcg ggcgctgcaa ggaagtgctg gacaaggtcg agccctacga cccggtcatc
     2941 gtcgatggcg acaacgccca ggtgttcctg cgtcccagcg aggacatcaa ggacatcttc
     3001 aacgacgcgc tgaagcagcg ccagcagcgc gccgccgtct atgcccgcct gcgcgacctg
     3061 cccgccatca cccgcgacgg catccaggtc agcctgaaca tgaatgccgg cctgttgctg
     3121 gacctgcagc acctgcacga gtcgggcgcc gacggcatcg gcctgtatcg taccgagctg
     3181 ccgttcatgg cccgctcggc gctgcccgac gtgcacgccc agaccatcct gtacaacaag
     3241 atcctggacc aggccgaggg caagccggtt gtgttccgct cgctcgacgt cggcggcgac
     3301 aaggtgttgc cgtactggaa tccgtcggag gaggacaacc ccgcgctggg ctggcggtcg
     3361 atccgcatca ccctggaccg ccccgccgtc atgcgccacc agttgcgcgc cctgctgcgg
     3421 gccgccgccg ggcgcgagct gagcgtcatg ttcccgatga tcgccgaggt cgccgaactg
     3481 gtgcaggcgc gccgcatcct ggacatggaa gtcgagcacg aacgccgcgc cggccacgtc
     3541 ctgccccagc gcatccgcgt cggcaccatg ctggaggtgc ccgctttggc gttccagatg
     3601 gacgcattgc tgccgctggt ggacttcatc tccatcggct cgaacgacct ggggcaattc
     3661 ctgttcgcgg tcgatcgcgg caaccctcgc atcgccgagc gctacgatcc cctggccccc
     3721 gccatgctga acttcatccg cttcatcgcc gccaaatgcg ccgagtccgg cgtggcgctg
     3781 tcggtgtgcg gcgagatggc cggccgtccg ctggaagcca tggccctgat cgcctgcggc
     3841 gtgcgcaccc tgtcggtgtc gtcgccgtcc atcggcccgg tcaagaccat gatccgctcg
     3901 ctggaggtcc aaccggtgcg cgactacctc gatgggctgc tcacctcgcc cagccggagc
     3961 ctgcgcaaca agctgaagct gttcgccatc gaccatggcg tcgtactgta gaaataaggc
     4021 gttcggccga ggaagcattg ccatgacggc cgggtgtgcg ttaaagagga cgggtttcgg
     4081 ccgcgtgcgc tctttcggat agccgcgcca ctcaccagga gggttccccc ccgtgcccag
     4141 cgatcaggac gccgccgtga ccgtcgagcc ccaggccgcg ctgaccacca gcgtcggcaa
     4201 gaccctgaag agcgcccgcg agcgcacggg caaggacctg accgaggtcg ccacccaatt
     4261 gcgcatccgc cagcccttcc tggaggcgct ggaagacggc cgccacaagg atctgcccgg
     4321 cggcacctat gcggtgggct tcctgcgcac ctatgccgaa ttcctgaacc tggacggcga
     4381 ggagatggtg cggcgcttcc gcatggaagc cgccggcgaa ctcaacgccc gcgccgagct
     4441 ggtgttcccg tcgccggtgt ccgaaggccg catccccggc ggcgccgtgc tgtttgtcgg
     4501 catggtgctg gccggcatcg gctacggcgc ctggtactgg ttgtcgtcga aggacgctgc
     4561 cgtcgccgac atggtcccgg cgctgcccga ccgtctggcc ggcgccctgc agcgcgccca
     4621 gccgcagccc gaggtcaagc cggccgaacc cgcagccgct ccggccgccg aagtgaagcc
     4681 cgaggagccc aagcccgaag gcgaggccaa gcccgccgcc aacgaggtgg tgccgccggc
     4741 cgaggacgac
//
LOCUS       DATIKR010000082         2161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_13128, whole genome shotgun sequence.
ACCESSION   DATIKR010000082 DATIKR010000000
VERSION     DATIKR010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13128"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..130
                     /locus_tag="VLL76_01310"
     CDS             <1..130
                     /locus_tag="VLL76_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoserine aminotransferase"
                     /protein_id="HSV28154.1"
                     /translation="DAPPGLRIWCGATVETADVAALLPWLDWAFAQVRAEFEPKVN"
     gene            259..1836
                     /gene="serA"
                     /locus_tag="VLL76_01315"
     CDS             259..1836
                     /gene="serA"
                     /locus_tag="VLL76_01315"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HSV28155.1"
                     /translation="MPKVLISDKLSPAAIQIFKDRGIEADVKVGLTPDELKAVIGDYD
                     GLAIRSNTKVTADILAAAKKLKVVGRAGIGVDNVDVPSATARGIVVMNTPFGNSVTTA
                     EHAIAMMFALARDIPQANASTHAGKWEKSKFMGIELTGKTLGIIGCGNIGAIVADRAM
                     GLKMRVVAADPFLSAERAKDLNIEKVDLDTLFARSDFITLHTPLTEATRNVIDAKAIA
                     KCKKGVRIINCARGGLVVEEDLKAAIESGHVAGAALDVFNVEPAKENGLFGMDKVVCT
                     PHLGASTSEAQENVALQVAEQMADYLLTGAVTNALNMPSVSAEDAPKLRPYMKLAGQL
                     GSFAGQLTEHALKSVQIEYDGHVATLNTKPLTAIVLEGLLKPMVEAVNMVNAPVIAKD
                     RNVVVSEVKNEREGDYHTRIRVSVTTEVRERSVAGTLFGGDKPRVVEIKGIPIEAELG
                     EHMLYVTNKDKPGFIGALGTLLGEHGVNIATFHLGRNEAGGDAILLTQVDQPLTDAVL
                     EKVRALPQVVQAKSMSF"
BASE COUNT          400 a          739 c          699 g          323 t
ORIGIN      
        1 cgacgccccg cccggattgc gcatctggtg cggcgccacg gtcgagaccg cggacgtggc
       61 ggcgctgctg ccctggctgg actgggcctt cgcccaggtg cgggccgagt tcgagcccaa
      121 ggtcaattaa acgagaaaca gccctcaccc ccggcccctc tcccgcaagc gggagagggt
      181 gctgctccct ccctcgcccg cttgcgggag agggagggtc ggggagggtg agggccatcc
      241 cccaagggag ggtcaccaat gcccaaggtt ttgatcagtg acaagctgag tccggccgcc
      301 atccagatct tcaaggatcg cggcatcgaa gccgatgtga aggtcggcct cactcccgac
      361 gaattgaagg ccgtcatcgg cgattacgac ggcctggcga tccgctccaa caccaaggtg
      421 accgccgaca tcctggccgc cgccaagaag ctcaaggtgg tcggccgcgc cggcatcggc
      481 gtcgacaacg tcgacgtccc ctccgccacc gcgcgcggca tcgtggtgat gaacaccccc
      541 ttcggcaatt cggtgaccac cgccgagcac gccatcgcca tgatgttcgc cctggcccgc
      601 gacatcccgc aggccaacgc ctcgacccat gccggcaagt gggaaaagtc caagttcatg
      661 ggcatcgagc tgaccggcaa gaccctgggt atcatcggct gcggcaacat cggcgccatc
      721 gtcgccgacc gcgccatggg cctgaagatg cgcgtggtcg ccgccgaccc cttcctgtcg
      781 gccgagcgcg ccaaggacct caacatcgag aaggtggacc tcgacaccct gttcgcccgc
      841 tcggacttca tcacgctgca cacgccgctg accgaggcca cccgcaacgt catcgacgcc
      901 aaggccatcg ccaagtgcaa gaagggcgtg cgcatcatca attgcgcccg cggcggcctg
      961 gtggtcgagg aagacctcaa ggcggccatc gaatccggcc atgtcgccgg cgccgcgctg
     1021 gacgtgttca acgtcgaacc ggccaaggag aacgggctgt tcggcatgga caaggtggtg
     1081 tgcacccccc atctcggcgc ctcgacctcg gaggcgcagg agaacgtggc gctgcaggtc
     1141 gccgagcaga tggccgacta tttgctgacc ggcgccgtca ccaacgcgct gaacatgccc
     1201 agcgtgtcgg ccgaggacgc ccccaagctg cggccctaca tgaagctggc gggccagttg
     1261 ggcagcttcg ccggccagtt gaccgagcac gcgctgaagt cggtgcagat cgaatacgac
     1321 ggccacgtcg ccacgctgaa caccaagccg ctgaccgcca tcgtgctgga agggctgctc
     1381 aagcccatgg tcgaggccgt caacatggtc aacgccccgg tcatcgccaa ggaccgcaac
     1441 gtggtggtgt ccgaggtcaa gaacgagcgg gaaggggatt accacacccg catccgcgtt
     1501 tcggtcacca ccgaggtgcg cgagcgttcg gtggccggca ccctgttcgg cggtgacaag
     1561 ccgcgcgtgg tcgagatcaa gggcattccg atcgaggccg aactgggcga gcacatgctg
     1621 tacgtcacca acaaggacaa gcccggcttc atcggcgccc tgggcaccct gctgggcgag
     1681 catggcgtca acatcgccac cttccacctg ggccgcaacg aggccggcgg cgacgccatc
     1741 ctgctgaccc aggtcgatca gccgctgacc gacgcggtcc tggaaaaggt ccgcgccctg
     1801 ccgcaggtgg tgcaggccaa gtcgatgtcg ttctgagggg aaagtcatgg ccgggtttca
     1861 cccggccatg gttggcttgc gcccatcccc tcatcgtcat gcccgtgctt gacacgggca
     1921 tccacgcggc tccgcctaag ggattgatgg caatgcggaa ttcgcggtcg ccacgtggat
     1981 cgccgggtca agcccggcga tgacgggaag gggggcgggc agcgaagcgc gatttcatga
     2041 aaaatgaacc ggacagccgt gggccaagcc cgcgcatgac gggaaggagg cacctttcta
     2101 agccgcccct cggccctctt ccgccaccgc ttcggcgcgg caggtttcca tgtcggactt
     2161 g
//
LOCUS       DATIKR010000083         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_74069, whole genome shotgun sequence.
ACCESSION   DATIKR010000083 DATIKR010000000
VERSION     DATIKR010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74069"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VLL76_01320"
     CDS             complement(<1..532)
                     /locus_tag="VLL76_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28156.1"
                     /translation="MAKRKSKSHRPAAGPVQAAREILLTAPDLGVQQILQMVVQQVEE
                     PGRILSELAAYDPDNHIAERAGLLLFTGLRETPPPESVKRELRSGAKAVLASALPDKS
                     IPDDRKMLLTAIYGLAGGHFSTEEYGTFFKDFDAAAQKMVGQVEARLSDEASQLEDAL
                     SGMEIMDLEEGGPQEKD"
     gene            complement(581..>2102)
                     /locus_tag="VLL76_01325"
     CDS             complement(581..>2102)
                     /locus_tag="VLL76_01325"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSV28157.1"
                     /translation="IILLALATGLVGCGAQPLPPLDSAHEPALRTSVAHLTSQPLEGR
                     AIGTVGLEGAAHYLAGYFEGLGLPSLPNHPYFHPFTYTRTEGLKLATHLTFAGVKLQR
                     GNDYHPAYYSPEGSFEGTVAFVGYAVSAPADDYDDFAGVDLKGKVALAMRFEPQLPNG
                     DSQLAGASWSEHAPILRKAKEAADRGAVALVLATPPGRKLKDSLVMVARNQSATAPIP
                     VYLVEQHIADRLLAAGGMPNLKTMQAHIDHAYSPRSVILRNTKLSGTVAFQRNSFNLK
                     NVVAFVPGRGPLADEYIVIGAHYDHIGRGAYGSRSPGSRLIHPGADDNASGTAALLEL
                     ARLFEGRRAGRSLLFVGFSAEEVGLIGSKHFVENPPVPLSKIKAMINLDMVGRLRSNQ
                     ITVGGMATSAAFDPIIQAVDEQSPLKVAHAWKDGIAPSDCLPFVQKGIPILFFFTGVH
                     PDVHRVSDTPDKINYAGQAQVVDFAAATIERLRTTPVLEYSPPSAKPTSTPAEAGQ"
BASE COUNT          315 a          633 c          778 g          376 t
ORIGIN      
        1 tgtctttctc ctgcggcccg ccttcttcga ggtccatgat ctccatgccg ctgagggcat
       61 cttcgagctg gctggcttcg tcggagagcc gggcctcgac ctgcccgacc attttctggg
      121 cggccgcgtc gaaatccttg aagaacgtgc cgtactcttc ggtcgagaag tgcccgccgg
      181 ccaggccgta aatcgcggtc agcagcattt tccggtcgtc gggaatgctc ttgtcgggca
      241 gggcgctggc gaggacggcc ttcgcgccgc tgcgcagctc gcgcttgacc gactccggcg
      301 ggggcgtttc ccgcaggccg gtgaacagca gcagccccgc gcgctcggcg atgtggttgt
      361 cggggtcgta cgccgccagc tcggacagga tgcggccggg ctcctcaacc tgctggacca
      421 ccatctggag gatctgctgc acgcccagat cgggcgcggt caggaggatc tcccgcgccg
      481 cctgcaccgg tcccgcggcc ggcctgtgcg atttactctt cctttttgcc atgccgctac
      541 cctacccgtt gcagcgtcat gcgacaactg gcggagatgg tcactgcccc gcctccgcgg
      601 gggtcgaggt gggtttggcg gagggagggg agtattcgag gacgggggtg gttcggagac
      661 gttcgatggt ggcggccgcg aaatcgacga cctgggcctg gccggcgtag ttgatcttgt
      721 cgggggtgtc gctgacccgg tggacgtccg ggtgtacgcc ggtgaagaag aacaggatgg
      781 ggatgccctt ctggacgaag ggcaggcagt cgctgggggc gatgccatcc ttccatgcat
      841 gggcgacctt cagcggtgac tgctcatcga cggcctggat gattggatcg aaggcggccg
      901 aggtggccat gccgccgacg gtgatctggt tgctgcgcag ccggccgacc atgtcaaggt
      961 tgatcatggc cttgattttc gagaggggaa ccggtgggtt ttcgacgaag tgcttcgagc
     1021 cgatcagccc cacttcctcg gccgagaagc cgacgaagag gagcgaccgc ccagcgcggc
     1081 ggccttcgaa cagccgcgcc agttccagca gggcggcggt gcccgaggcg ttgtcatctg
     1141 cgccgggatg aatcagccgc gagccgggcg agcgcgagcc gtaagcgccc cggccgatgt
     1201 ggtcgtagtg cgcgccgatg acgatgtact catcggccag cggcccccgg ccaggcacga
     1261 aggcgacgac gttcttgaga ttgaagctgt tgcgctggaa cgcgacggtt cccgagagct
     1321 tcgtgttccg aaggatgacc gagcgggggg agtacgcgtg gtcgatgtgc gcctgcatcg
     1381 tcttcaggtt gggcatgccg ccggcggcca gcaggcggtc ggcgatgtgc tgctcgacga
     1441 gatagacggg gattggggcg gtcgccgact ggttccgcgc caccatgacg aggctgtcct
     1501 tgagctttcg gccgggggga gtcgccagca ccagcgccac cgcgccgcga tcggccgcct
     1561 cctttgcctt gcggaggatc ggggcgtgtt ccgaccaact cgccccggcg agctgcgagt
     1621 cgccgttggg caactggggc tcgaagcgca tcgcgagggc gaccttgccc ttgaggtcca
     1681 cgccggcgaa gtcgtcatag tcatcagccg gcgcgctgac ggcgtatccg acgaaggcga
     1741 ccgtgccttc gaaggagcct tcgggcgagt agtaggccgg gtgatagtcg ttgccgcgtt
     1801 ggagcttgac gccggcgaag gtcaggtggg tggcgagctt caggccttcg gtgcgggtgt
     1861 aggtgaaggg atggaaatat ggatggttgg gcagggacgg cagtccgagc ccctcgaagt
     1921 agccggcgag gtaatgggcg gccccctcga gacccacggt gccgatggcc cggccttcaa
     1981 gcggctggct tgtcaggtga gccacgcttg tccgcagggc cggttcgtgg gcggaatcga
     2041 gcggcggcag gggctgcgcg ccgcagccga ccagtccggt cgccagggca agcaggatta
     2101 tc
//
LOCUS       DATIKR010000084         4845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_13280, whole genome shotgun sequence.
ACCESSION   DATIKR010000084 DATIKR010000000
VERSION     DATIKR010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4845
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13280"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1977)
                     /locus_tag="VLL76_01330"
     CDS             complement(<1..1977)
                     /locus_tag="VLL76_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28158.1"
                     /translation="MSLSSLLRRLGLGLAILVAVVVAGLAGFVAFLHGGRGEDWAAAR
                     VERAVPGLKLAELAVTWPLNLSAKQVTLADDKGIWLRIEQPVLEWHPTRLLRRVLEID
                     RFEASRAVVHRMPEYEGGGQGQGAPPRLSFHVDQLAVPVILEQPVLGERVELNLVGTY
                     QKQAGGGAVDLLVRARQGASLRLVGTAGTDFVDLRWYADFPRLAQWQRLLGLDVEGRL
                     SGDGLVSGRLPSPVITGALRVDGARVGAWGAQTLDLTARAIPRQGGWQAALDATIRQP
                     RRQGEAPLVPEARLTSAFDVDPAGRRVRIGQARLLSGGNEARLSGIVGAWGRQAELRL
                     AVDADRLEDLPGDLSGTASATAQVSGDLLAPAITAIVNLDASRLATGIAVLDRLLGAA
                     PRAHGIVALRGERVRLLSAEIEGARAQASGSGEVWPRLDLHARLEMPDLSVLDDSVKG
                     AGVARGRVAGDYDALATWGIADLDRLVAAGAPPTDGRVGFDFSLSLSGPPVGTVSGLV
                     DFGGRPLEGSARVATGTPTRIENLRLTSRGSRLTGDLAFGERLAGRLRVVVPSLAEWR
                     REIGRPVAGALEAEAVLDTKTIRLTLRGRGLTAEGVTLDTLAARAEGEPSAFRFDAQG
                     SGRGAVLALGGNARIEGPRGLAAIDRMRLMAMGRE"
     gene            complement(2036..3793)
                     /locus_tag="VLL76_01335"
     CDS             complement(2036..3793)
                     /locus_tag="VLL76_01335"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HSV28159.1"
                     /translation="MRFLLWLLLAALLPIGAQAQGVPYRAEVLGIEGDGLRGRVEEAS
                     RLIQLADEEPASMVALTRRAEADIERVREVLRSEGYYAGKVAFEIDEGQTPVPVRLLV
                     EPGPPFLLQSYEIETEVPPGSPGPQPVDPAALGLEIGTRARAEPVVAARSALLRNLAE
                     QGFPLAEVEDDRVVVDHATHTMRVTVRVRSGRQARFGPVTVTGLENVREKYVRRRLTW
                     QQGDVFSVSKVEALREALVNTRLFTSMRIETAKETDPEGLLPVTIELREAKHRSIGFG
                     LTWSSNEGFGGHAFWEHRNVDNGGERLRTALVASEVRNALDVTYREPDFLAADQNLLL
                     AGTAEEQRTDAFTTRTVGGSAGVEWNLSRRWTASASLALDRTFEEENEQTTDFTLVSV
                     PLEVRHDSTDDLLDPTRGNRMRALVRPFFEPPGTSGFTQFDLSDSHYWQVLAEPRVIA
                     AAWGRVGTIRGASFQEVPADRRFYVGGGGSVRAFGYQMAGPVDADEDPTGGLSALAFG
                     GELRIKVSEDVGLVPFVEAGRADIAKWPSGPLFWGGGLGVRYHTPVGPVRADIAVPIN
                     GREGIDDDYVVYLSLGQAF"
     gene            complement(3875..>4845)
                     /locus_tag="VLL76_01340"
     CDS             complement(3875..>4845)
                     /locus_tag="VLL76_01340"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV28160.1"
                     /translation="VKKLMERERLDMVLTGVSPSSLAAIAPTLVEARLFVLNLDQAPA
                     DMAGAACSPWLFDLASPGDGIHEAMGQHLAAERVRRLVVIGPDTPLTDEAVAALRRTF
                     PGEVGEVLRTKPGAAVYDAEIRRIRADKPDAVYSLLGGGAGVAFIRAWGASGLKAELP
                     LFAPWTSVERPLLPAMGDAALDVVSIGTWSPDLDSIPSKRLTTEFEAEYGRPVTTWAA
                     QGYDAAFLLDAALKATHGRTHDAEALRSGLRRAEFVSVRGGFRFNTNHFPVLSYYLRK
                     VVKDSKGRLTHELRGTVLKDWRDHFAAQCPMRWVEEPPPPPVVKKP"
BASE COUNT          738 a         1779 c         1669 g          659 t
ORIGIN      
        1 ctcgcgcccc atcgccatca ggcgcatgcg gtcgatggcg gccagcccgc gcggcccttc
       61 gatgcgggcg ttgccgccca gcgccagcac ggcaccgcgc cctgaccctt gggcatcgaa
      121 gcggaaggcg gacggctctc cttcggccct tgccgccagc gtgtccagcg tcacgccctc
      181 ggcggtcagg ccgcgaccgc gaagggtcag gcggatcgtc ttggtatcca gcaccgcctc
      241 cgcctccaac gcgccggcga ccggccgccc gatctcgcgc cgccattcgg ccaatgacgg
      301 caccaccacg cgcagccggc cggccagccg ttcgccgaat gccagatcgc cggtcaaacg
      361 gctgccgcgc gacgtcagcc gcaaattctc gatgcgggtc ggcgtgccgg tggcgacgcg
      421 ggccgaaccc tccagcggcc gcccgccgaa atccaccagc ccgctgacgg tcccgacggg
      481 cggcccggac agggagaggg agaaatcgaa cccgacgcgg ccgtcggtcg gcggtgcccc
      541 ggcggcgacc agcctgtcca gatccgcgat cccccaggtc gccagggcgt cataatcgcc
      601 ggccacccgc ccgcgcgcca cgcccgcccc tttcacgctg tcatccagca ccgacaggtc
      661 gggcatttcc agccgcgcat gcaggtcgag ccggggccac acctctcccg acccgctcgc
      721 ctgcgccctg gccccctcga tctcggcgga caacagccgc acccgctcgc cgcgcagggc
      781 gacgatgccg tgggcgcgcg gcgccgctcc caacaatcga tccagaaccg cgatgccggt
      841 cgccagccga gaagcgtcga gattgacgat ggcggtgatg gccggcgcca gcaggtcgcc
      901 gctgacctga gcggtcgccg aggctgtgcc gctgagatcg cccggcaggt cctcaaggcg
      961 gtcggcgtcc acggccaagc gcaactcggc ctgccggccc cacgcgccga cgatgccgct
     1021 caaccgcgcc tcgttgccgc ccgacagcag ccgagcctgg ccgatgcgaa cccggcgtcc
     1081 ggcgggatcg acgtcgaagg cggaggtcag ccgggcctcg gggaccagcg gcgcctcgcc
     1141 ctggcggcgc ggttggcgga tggtggcgtc caaggccgcc tgccagccgc cctggcgcgg
     1201 gatggcgcgg gccgtcaggt ccagtgtttg cgcgccccag gcgccgaccc gggcgccgtc
     1261 cacccgcaat gcgccggtga tcaccggcga cggcagccgt cccgacacca gcccgtcgcc
     1321 actcagccgc ccttccacgt ccagccccaa caggcgttgc cattgcgcca gacggggaaa
     1381 gtcggcgtac cagcgcaaat caacgaagtc ggtgccggcc gtgccgacca gccgcaagga
     1441 ggcgccctgc ctcgcccgca caagaaggtc caccgccccg ccgccggcct gcttctgata
     1501 ggtgcccacc aggttcagct ccacccgttc gcccagcacc ggctgctcca ggatcaccgg
     1561 gaccgccaat tggtccacat ggaagctcag gcgcggcggc gcgccttggc cctgcccgcc
     1621 cccttcatac tcgggcatgc gatgcaccac cgcccggctt gcctcgaacc ggtcgatttc
     1681 cagcactcgg cgcagcagcc gggtgggatg ccattccagt accggctgtt cgatgcgcag
     1741 ccagatcccc ttgtcgtctg ccagggtcac ctgtttggcc gacaggttca gcggccaggt
     1801 caccgccaat tccgcgagct tcaggccggg aacggcgcgt tcgacacgcg cggccgccca
     1861 atcctcgccg cgtccgccat ggaggaacgc gacgaagccg gccaagccgg ccaccaccac
     1921 ggcgaccagg atcgcgaggc cgaggccgag ccggcgcagg agggaagaca gggacatggt
     1981 cgagatgtgg ggcgacggcc catcacgggg catcccccgg atgacggaac ttccgtcaga
     2041 acgcctgccc caggctcaga tagaccacgt aatcgtcgtc gatgccctcg cggccattga
     2101 tggggacggc gatgtcggcg cgcaccgggc cgaccggggt atggtagcgc acgcccagcc
     2161 cgccgcccca gaacagcggg ccgctgggcc atttggcgat atcggcgcgg ccggcctcga
     2221 cgaacggcac caggccgaca tcctcgctga ccttgatgcg cagttcgcct ccgaaggcca
     2281 gggccgacag gccgccggtg gggtcctcgt cggcatcgac ggggccggcc atctggtagc
     2341 cgaaggcccg caccgagccg ccgccgccca catagaaacg gcggtcggcc ggcacctcct
     2401 ggaatgaagc gccccggatg gtgcccaccc gcccccaggc ggcggcgatg acgcgcggtt
     2461 cggccagcac ctgccaataa tggctgtcgc tgaggtcgaa ctgggtgaag cccgaggtgc
     2521 ccggcggctc gaagaacggc cgcaccaggg cgcgcatgcg gttgccgcgg gtggggtcca
     2581 acagatcgtc tgtggaatcg tggcggacct ccaggggcac cgacaccagg gtgaaatccg
     2641 tggtctgctc gttctcttcc tcgaaggtgc ggtccagggc aagggacgcc gacgccgtcc
     2701 acctgcggct caaattccat tccacgccgg ccgagccacc gacggtgcgg gtagtgaagg
     2761 cgtcggtgcg ctgttcctcg gcggtgccgg ccaacaacag gttctggtcg gcggccagaa
     2821 agtcgggctc gcggtaggtg acgtccaggg cgttgcgcac ctcgctggcg accagggcgg
     2881 tacgcaggcg ctcgccgccg ttatcgacgt tgcggtgctc ccagaaggca tggccgccga
     2941 aaccctcgtt ggacgaccag gtgagcccga agccgatgga gcggtgtttg gcctcgcgca
     3001 attcgatggt gacgggcagc agtccctcgg ggtcggtctc cttggccgtc tcgatgcgca
     3061 tggaggtgaa caggcgggtg ttcaccagcg cctcgcgcag cgcctcgacc ttggacaccg
     3121 agaacacgtc gccttgttgc caagtcaggc ggcggcgcac gtatttctcg cgcacgttct
     3181 ccagtccggt cacggtgacc gggccgaagc gggcctggcg gccgctgcgc accctcaccg
     3241 tcacccgcat ggtgtgggtg gcgtggtcca ccaccacgcg gtcgtcttcc acttcggcca
     3301 gtgggaagcc ctgctcggcc agattccgca gcagcgccga ccttgccgcc acgaccggtt
     3361 ccgcccgcgc ccgcgtgccg atttccaggc caagggcggc cgggtccacc ggctgcggcc
     3421 cgggcgagcc gggcggcacc tcggtctcga tctcgtagga ttgcagaagg aagggcgggc
     3481 cgggttcgac cagcaggcgg accggcacgg gcgtttggcc ctcgtcgatc tcgaacgcca
     3541 ccttgccggc gtaatagccc tccgaccgca acacctcgcg cacgcgctcg atgtcggcct
     3601 cggcccggcg ggtcagggcc accatgctgg caggttcctc gtcggccaat tggatcagcc
     3661 gcgacgcttc ctcgacccgg ccgcgcaggc cgtcgccctc gatgccgagc acctccgccc
     3721 ggtagggcac gccttgggcc tgcgccccga tgggcagcag cgcggccaac agcagccaca
     3781 ggagaaagcg catggattca ccaccggatc gacgaccggc ggcgagtgta gggtgccaag
     3841 ccgccagcca gaaggtggcc ggacggctta tgcctcaggg cttcttgacc accggcggcg
     3901 gcggcggttc ctcgacccag cgcatggggc attgggcggc gaagtggtcg cgccagtcct
     3961 tcagcacggt gccgcgcaat tcatgggtca gccggccctt ggaatccttc accactttgc
     4021 ggaggtaata gctgagcacc gggaagtggt tggtgttgaa gcgaaagccg ccgcgcaccg
     4081 acacgaactc ggcgcgccgc aatccgctgc gcagggcctc ggcatcgtgg gtgcggccgt
     4141 gggtggcctt gagcgcggcg tccagcagga aggctgcgtc atagccctgg gccgcccagg
     4201 tggtgacggg gcggccgtat tcggcctcga actcggtggt caggcgcttg ctcgggatgg
     4261 aatccaggtc gggactccag gtgccgatgc tgacgacgtc cagggcggca tcgcccatgg
     4321 ccggcagcag cggccgctcg accgatgtcc agggggcgaa cagcggcagt tcggctttca
     4381 ggcccgacgc cccccaggcc cggatgaacg ccacgccggc gccgccgccc agcagggaat
     4441 agacggcatc gggcttgtcg gcgcggatgc gcctgatctc ggcatcgtag acggcggcgc
     4501 cgggcttggt gcgcagcacc tcgccgacct cgccggggaa ggtgcgtctg agggcggcga
     4561 cggcctcgtc ggtcagcggc gtgtcggggc cgatcaccac cagccggcgg acccgttcgg
     4621 cggcaaggtg ctgccccatg gcctcgtgga tgccgtcgcc gggcgacgcc aggtcgaaca
     4681 gccagggcga gcacgccgcc cccgccatgt cggccggtgc ctggtcgagg ttgagcacga
     4741 acagccgcgc ctccaccagc gtgggcgcga tggccgccag cgacgacggc gacaccccgg
     4801 tcagcaccat gtcgaggcgc tcgcgctcca tcagcttctt gacct
//
LOCUS       DATIKR010000085         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_182661, whole genome shotgun sequence.
ACCESSION   DATIKR010000085 DATIKR010000000
VERSION     DATIKR010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182661"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VLL76_01345"
     CDS             <1..269
                     /locus_tag="VLL76_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HSV28161.1"
                     /translation="QAAGNIQFQDIVRQQLEHIVTALNRLDGCNASLAKALTDLSASG
                     AIASVDAELDRMLGSYVMHTQRSAHAAVTGQTVAARTHDDVELF"
     gene            384..>1739
                     /locus_tag="VLL76_01350"
     CDS             384..>1739
                     /locus_tag="VLL76_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HSV28162.1"
                     /translation="MIRLLAVFLCLTIALPAAAQQQVPQSREQISLTFAPVVKQAAPA
                     VVNIYTRRIVKAAASPLLADPFFRRFFGDAAPHGLPQDRVQRSLGSGVIVAANGTVIT
                     NHHVINGADEVTVVLADRREFEATIVGSDERSDLAVLRIDPKGAQLPVLPFGDSDELE
                     VGDLVLAVGNPFGVGQTVTSGIVSALARTNVGITDYRSFIQTDAAINPGNSGGALIDM
                     KGRLVGINSAIYSKDGGSNGIGFAIPTALVKAVLSGITEQGKVVRAWLGAHGQPVTAD
                     LAEALKLPRPVGVLIDAVHRGSPAAKGGLQPGDVVVAVQGREVDDPDGMRFRLATLPL
                     GTNAKLTVLRDGAERDLAIPLMAPPENPPRDMTDVEGANPFSGTTIANINPALAEEVG
                     MDSGASGVVILRIKRGSIAHRLRFQPGDIILKVNDRAVERVADARKALAGQQKVWRVT
                     IN"
BASE COUNT          278 a          638 c          559 g          264 t
ORIGIN      
        1 tgcaggccgc cggcaacatc cagttccagg acatcgtgcg ccagcaattg gagcacatcg
       61 tcaccgccct gaaccgcctg gacggatgca acgcatcgct ggcgaaggct ctgaccgacc
      121 tgtcagcctc cggcgccatc gcctcggtgg acgctgaatt ggaccgcatg ctgggcagct
      181 acgtgatgca cacccaacgg agcgcccacg ccgcggtcac cggccagacg gtggccgccc
      241 gcacccacga cgacgtggaa ttgttctgaa gcggtcgccg gggtccatgc cggacacctt
      301 tcgggtcggg aatgacgggt gagtggcacg ggctaacctg ctataaactc ttctccccat
      361 tcaccacagc gccggccgtg cccatgatcc gcctgcttgc cgttttcctt tgcctcacca
      421 tcgcattgcc ggccgccgcg cagcagcagg tgccgcaatc gcgcgagcag atctcgctga
      481 ccttcgcacc tgtggtgaag caggcggcgc cggcggtggt caacatctat acccggcgca
      541 tcgtcaaggc ggccgcctcg ccgctgttgg cggacccgtt cttccgccgc ttcttcggcg
      601 acgcggcgcc ccacggcctg ccccaggacc gggtgcagcg gtcgctggga tcgggcgtca
      661 tcgtcgccgc caacggcacc gtcatcacca accaccacgt catcaacggc gccgacgagg
      721 tcaccgtggt gctggccgac cgccgcgagt tcgaggcgac gatcgtgggt tcggacgagc
      781 gctccgacct ggcggtgctg cgcatcgatc ccaagggcgc gcaactgccg gtgctgccct
      841 tcggcgattc cgacgaactg gaggtcggcg acctggtgct ggcggtgggc aacccgttcg
      901 gcgtcggcca gacggtgacc agcggcatcg tgtcggccct ggcccgcacc aatgtcggca
      961 tcaccgacta tcgctcgttc atccagaccg acgccgccat caatcccggc aattccggcg
     1021 gcgccctgat cgacatgaag ggccggctgg tcggcatcaa ctcggccatc tattccaagg
     1081 acggcggctc caacggcatc ggcttcgcca ttcccaccgc cctggtcaag gccgtgctgt
     1141 cgggcatcac cgagcagggc aaggtagtgc gcgcctggct gggcgcccac ggccagcccg
     1201 tcaccgccga tttggccgag gcgctgaagc tgccccgccc ggtgggcgtg ctgatcgacg
     1261 ccgtccatcg cggcagcccc gccgccaaag gcggcctgca gccgggcgac gtggtggtcg
     1321 ccgtgcaggg ccgcgaggtc gacgaccccg acggcatgcg cttccgcctc gccaccctgc
     1381 ccctggggac caacgcaaag ctgaccgtcc tgcgcgacgg cgccgagcgc gacctcgcca
     1441 ttcccttgat ggcgccgccg gaaaacccgc cgcgcgacat gaccgacgtc gagggcgcca
     1501 acccgttctc gggcaccacc atcgccaaca tcaatcccgc cctggccgag gaagtgggca
     1561 tggacagcgg cgcgtccggg gtggtcatcc tgcgcatcaa gcgcggttcc atcgcccacc
     1621 gtttgcggtt ccagcccggc gacatcatcc tgaaggtcaa cgaccgggcg gtggaacgcg
     1681 tcgccgatgc ccgcaaggcg ctggccggcc agcagaaggt gtggcgggtg accatcaac
//
LOCUS       DATIKR010000086         2609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_194896, whole genome shotgun sequence.
ACCESSION   DATIKR010000086 DATIKR010000000
VERSION     DATIKR010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194896"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..441
                     /locus_tag="VLL76_01355"
     CDS             76..441
                     /locus_tag="VLL76_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28163.1"
                     /translation="MTKHALVGAACALLAACGPNHPAPGEAPGWNTPSPPRGSMDIPI
                     PFRDQYLPPSAHQIEQLPPVPKGENVPYAVRGQSVAQPAAAPAAQPDCHPVPTVTVDG
                     KPSSTVCRNPEGGWSYVPD"
     gene            615..1655
                     /gene="argC"
                     /locus_tag="VLL76_01360"
     CDS             615..1655
                     /gene="argC"
                     /locus_tag="VLL76_01360"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HSV28164.1"
                     /translation="MDKVKVAILGASGYTGAELVRLLARHPNFHMAALTGDRKAGQSM
                     ASVFPHLAALDLPTLVSIDQVDFAGIDAVFCALPHGTTQEVIAGLPKHVKIVDLSADF
                     RLYELASYAKWYGHEHKAPALQKEAVYGLTELVRDKVANARLVANPGCYPTSAQLPLI
                     PLIEAGAILVEDIIIDAKSGASGAGRSAKEANLYCEVTEGIHAYGIASHRHSPEIEQG
                     LSRAAGKPVIVNFTPHLMPMSRGILSTIYVKLRGRHKAADLRAILAKRYDGEAFVKVL
                     PEGVVPQTRHVRGSNMCFMNVFDDRVEGRAIITSVIDNLVKGASGQALQNMNLMYGLP
                     ETLGLEQQPLFP"
     gene            1755..2279
                     /locus_tag="VLL76_01365"
     CDS             1755..2279
                     /locus_tag="VLL76_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HSV28165.1"
                     /translation="MSGTILPYKGVRPTIADDVFIAPTAVVIGDVVIGAGSSVWFNCT
                     VRGDVHEIRIGERTNIQDGTVVHVTGGKFGTYIGSDITIGHGAVLHACTLEDCCFIGM
                     GATVMDGAVVETGAMVAAGAVVTPGKRVRKGELWAGNPAKLLRELTEADIAFFPKSAA
                     NYVALAATYRGEQG"
     gene            2378..>2609
                     /locus_tag="VLL76_01370"
     CDS             2378..>2609
                     /locus_tag="VLL76_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28166.1"
                     /translation="MSRMRPRIGLLSRLAGLVSLGRKNEPAPPTAVVAQAANQDLTDD
                     SFRLALDQMVQDEEGRHQTKLQIISLVEFREAV"
BASE COUNT          441 a          918 c          849 g          401 t
ORIGIN      
        1 ggaaaagatc gccggcgacc tggcgctcaa cgtcatggac ggcctgatga agcaatggaa
       61 ataggagtgc gcggaatgac caagcatgcc ctggtgggcg ccgcctgcgc cctgctggcc
      121 gcctgcggcc ccaaccatcc cgcccccggc gaggcccccg gctggaacac gcccagcccg
      181 ccgcgcggct ccatggacat cccgatcccg ttccgcgacc agtatctgcc gccgtcggcc
      241 caccagatcg agcaattgcc gccggtcccc aagggcgaga acgtccccta tgcggtgcgc
      301 ggccagtcgg tggcccaacc cgccgccgcg ccggccgccc agcccgattg ccacccggtt
      361 cccaccgtca cggtggacgg caagccgtcg agcacggtgt gccgcaatcc cgagggcggc
      421 tggagctacg tgccggactg acggctacca cctcggctga aagatccttc ggctgcgcct
      481 caggatgaca ggtggtggtg tcatgctgaa accggcggaa accgcctcgg gctgaagcgc
      541 ctcaggatga caacctgatc ggccgctgct atcgtccgct ccctgaacat tctcgtttgc
      601 aagggagcat ggagatggac aaggtcaagg tcgcgatcct gggtgccagc ggttacaccg
      661 gcgccgagct ggtgcgcctg ctggcccgcc accccaattt ccacatggcc gccctgaccg
      721 gcgaccgcaa ggccggccag agcatggcca gcgtgttccc gcatctggcg gcgctcgacc
      781 tgccgacttt ggtgtccatc gaccaggtgg acttcgccgg catcgacgcg gtgttctgcg
      841 ccctgcccca cggcaccacg caagaggtca tcgccggcct gcccaagcat gtgaagatcg
      901 tcgacctgtc ggccgatttc cggctgtacg agttggcgtc ctatgccaag tggtacggcc
      961 acgagcacaa ggcgccggcg cttcagaagg aggccgtcta cggcctgacc gagctggtgc
     1021 gcgacaaggt ggcgaatgcc cggctggtgg ccaatcccgg ctgctatccg acctcggccc
     1081 aattgccgct gatcccgctg atcgaggccg gcgccatcct ggtggaagac atcatcatcg
     1141 acgccaagtc gggcgcctcg ggcgccggcc gctcggccaa ggaagccaac ctctattgcg
     1201 aggtgaccga gggcatccac gcctacggca tcgccagcca ccgccattcg cccgagatcg
     1261 agcagggcct gagccgggcc gccggcaagc cggtgatcgt caacttcacg ccgcatctga
     1321 tgcccatgag ccggggcatc ctgtcgacca tctacgtcaa gctgcgcggg cgccacaagg
     1381 ccgccgacct gcgcgccatc ctggcaaagc gctatgacgg cgaagccttc gtcaaggtgc
     1441 tgcccgaggg cgtggtgccg cagacccgcc atgtgcgcgg ctcgaacatg tgcttcatga
     1501 acgtgttcga cgaccgcgtc gagggccgcg ccatcatcac ctcggtgatc gacaacctgg
     1561 tcaagggtgc gtcgggtcag gcgctgcaga acatgaacct gatgtacggc ctgcccgaga
     1621 ccctgggcct cgagcagcag ccgctgttcc cgtaaacgct cggcttcgcc tcggccccca
     1681 ccccagccct cccccggctc tgccggggga gggagccgag cgcagcgagg taataataag
     1741 caacggagaa ctccatgtcc ggcaccatcc tgccttacaa gggcgtccgc cccaccatcg
     1801 ccgacgacgt cttcatcgcc ccgaccgccg tggtgatcgg cgacgtggtg atcggcgcgg
     1861 gatcgtcggt gtggttcaac tgcacggtgc gcggcgacgt ccacgagatc cgcatcggcg
     1921 agcgcaccaa catccaggac ggcaccgtgg tgcacgtcac cggcggcaag ttcggcacct
     1981 atatcggctc ggacatcacc atcggccacg gcgccgtgct gcacgcctgc acgctcgagg
     2041 attgctgctt catcggcatg ggcgccaccg tcatggacgg cgcggtggtc gagaccggcg
     2101 ccatggtcgc ggccggcgcg gtggtcaccc ccggcaagcg ggtcaggaag ggcgagctgt
     2161 gggccggcaa cccggccaag ctgctgcgcg aactgaccga ggccgacatc gccttcttcc
     2221 ccaagtcggc cgccaattac gtcgccttgg ccgccaccta ccggggcgag cagggctgag
     2281 gttcggcttg cccgtttgat gcgggcatcc tatcctttcg tccggtcgtc gccggcgcca
     2341 gaaggcgcgg gccggccgtg agcgagtgga gaacacgatg agcaggatgc ggccgagaat
     2401 cggcttgttg tcccgcctgg ccgggttggt atcgctgggt cgcaagaatg agcccgcgcc
     2461 gccgacggcc gtcgtcgccc aggcggcgaa ccaggatctc accgacgatt cgttccgcct
     2521 tgccctggac cagatggtcc aggacgagga aggccgccac cagaccaagc tgcagatcat
     2581 ctcgctggtc gagttccgcg aggcggtcg
//
LOCUS       DATIKR010000087         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_25566, whole genome shotgun sequence.
ACCESSION   DATIKR010000087 DATIKR010000000
VERSION     DATIKR010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25566"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VLL76_01375"
     CDS             <1..725
                     /locus_tag="VLL76_01375"
                     /inference="COORDINATES: protein motif:HMM:TIGR03661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV28167.1"
                     /translation="YIRVYEEAAPHSSQPGPVTGAAPTNTILGTNAANVINGTSGHDR
                     IDGKAGADTMAGKGGSDTYVVETMGDKVVEYSGQGIDTVFSSLGFRLGAYMENLTLTG
                     TANVNGTGSNWHNHLTGNDGANALYGLGGNDRLTGGKGADVLTGGAGHDTFVFRSKAD
                     AGDRILDFDTAHDRLDVRQLLASIGSTSKDPLADNLLAIRQEGADAVLMVTQPGTQAV
                     RLATVEKVDAHLLAATSDHWTV"
     gene            801..1130
                     /locus_tag="VLL76_01380"
     CDS             801..1130
                     /locus_tag="VLL76_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011929961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HSV28168.1"
                     /translation="MGYADLEKTGSGYLCNTDDWNEQVAAEIAAAEGLGTLTQRHWDL
                     LNYLRDEFFNNGGNQPNERAMVKAMTEQWGGSVSTKDLYDLFPMQPSKQATKVAGLPE
                     TKRKGGY"
     gene            1259..>2063
                     /locus_tag="VLL76_01385"
     CDS             1259..>2063
                     /locus_tag="VLL76_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28169.1"
                     /translation="MKKLTGRFPRSTRAMVFALLAAMIAIVWAEVIKDTVDHYAEYRE
                     AQRVVAANATVDHLMHAGQNLGFERGRTNFALHQDLPTSSENRPLIDQRRRAFDTEFA
                     AALEHLGDDALAASFRDKLATLAELRQRADLALALPLAERPAELPGIWFPTLTTLMAD
                     VEALMADVSLGPERYTATFRILSRIKIMAFRLRMSLGAESARISSGIAAGRPFDQSTL
                     NEMARLRGESTATWAALKKEIKLVSSDRLQQSLSGVDKLFFADFRPMQDH"
BASE COUNT          382 a          721 c          638 g          322 t
ORIGIN      
        1 actacatccg ggtctacgaa gaggccgccc cccattccag ccagcccggc ccggtgaccg
       61 gcgccgcccc caccaacacc atcctcggca ccaatgccgc caacgtgatc aacggcacca
      121 gtggccatga ccgcatcgac ggcaaggccg gcgccgacac catggccggc aagggcggca
      181 gcgacaccta tgtggtcgag accatgggcg acaaggtggt cgagtattcc ggccagggca
      241 tcgacaccgt gttctcgtcg ctgggcttcc gcctgggcgc ctatatggag aacctgaccc
      301 tgactggcac cgccaacgtc aacggcaccg gctcgaactg gcacaaccac ctgaccggca
      361 acgacggcgc caacgccctg tacggcctgg gcggcaacga ccgcctgacc ggcggcaagg
      421 gcgccgatgt gctgaccggc ggtgccggcc acgacacctt cgtgttccgt tcgaaggccg
      481 acgcgggcga ccgcatcctc gacttcgaca ccgcccacga ccgactggac gtgcgccagt
      541 tgctggcctc gatcggctcg acctccaagg acccgctggc cgacaacctg ctggccatcc
      601 gccaggaggg cgccgatgcg gtcctgatgg tgacccagcc cggcacccag gcggtgcggc
      661 tggcgacggt cgaaaaggtg gacgcccatc tgttggccgc gacctcggac cattggacgg
      721 tgtgacgccc ccctttccgt ctcctcgcga tggcgctata ttagaatcac attataaaaa
      781 cccacggagg agacggagcg atgggttacg cggatctgga aaagaccggc agcggctatc
      841 tttgcaacac cgacgactgg aacgagcagg tcgccgccga gatcgcggcc gccgagggcc
      901 tgggcacgct gacccagcgc cactgggacc tgttgaacta cctgcgtgac gagttcttca
      961 acaatggcgg caaccagccc aacgagcgcg ccatggtcaa ggccatgacc gagcaatggg
     1021 gcggcagcgt ttccaccaag gacctgtacg acctgttccc catgcagccg tccaagcagg
     1081 ccaccaaggt ggccggcctg cccgagacca agcgcaaggg cggctattga tccgccgggc
     1141 gatgccaagg cccgccgaat gcgtcggcgg gccacccttt tgcgcgctat aataagtgga
     1201 cgggtaatgc caaagcgtta tcctttcggt ttagtttgac gggccgaaag gacctcggat
     1261 gaagaagttg accggtcgct tccccaggtc aacccgcgcc atggtcttcg ccttgctggc
     1321 cgccatgatc gccatcgtct gggcagaggt gatcaaggac accgtcgatc attacgcgga
     1381 ataccgcgag gcgcagcggg tcgtcgccgc caatgccacc gtcgaccacc tgatgcatgc
     1441 cggccagaac ctgggtttcg agcgcggccg caccaatttc gcgctgcacc aggacctgcc
     1501 gacctcgtcc gagaaccgcc cgttgatcga tcagcggcgg cgcgccttcg acacggaatt
     1561 cgcggcggcc ctcgagcatt tgggcgacga cgcgcttgcc gcctccttcc gtgacaagtt
     1621 ggcgaccctt gccgagctgc ggcaacgggc cgatctcgcc ctggccttgc ccctggccga
     1681 aaggccggcc gagctgccgg gcatctggtt ccccaccctc accacgctga tggccgacgt
     1741 cgaggccctg atggccgacg tctcactggg gcccgagcgc tacaccgcga cctttcgtat
     1801 cctgtcgcgc atcaagatca tggccttccg cctgcgcatg tcgctgggcg cggaatccgc
     1861 gcggatttct tcgggcattg ccgccggaag gccgttcgac cagtccaccc tgaacgagat
     1921 ggcccgcctg cggggcgaga gcaccgccac ctgggcggcg ctgaaaaaag agatcaagct
     1981 ggtttccagc gaccgcctcc agcaatcgct gagcggggtg gacaagctgt tcttcgccga
     2041 tttccgcccg atgcaggacc acg
//
LOCUS       DATIKR010000088         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_134576, whole genome shotgun sequence.
ACCESSION   DATIKR010000088 DATIKR010000000
VERSION     DATIKR010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134576"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VLL76_01390"
     CDS             <1..329
                     /locus_tag="VLL76_01390"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HSV28170.1"
                     /translation="IKRLPVTRDDRVVGIVSRSDLLRALAQQRTEPGPADDSTLRDRM
                     LDMLAGQPWINLSLVNVVVENGTARLSGLIGSETERRALHVAAHSAGITRIDDQLSIG
                     AAPRGI"
     gene            complement(326..1189)
                     /locus_tag="VLL76_01395"
     CDS             complement(326..1189)
                     /locus_tag="VLL76_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV28171.1"
                     /translation="MRFELQCRDGYRLQGHAWPHRGDFAGTVIINPATGVLARYYHRY
                     AAFLAERGFAVITYDYRGIGLSRPDKMRGAGFRWRDWGELDFDAAITWARAHNPEGPL
                     MVVGHSIGGFLPGFAPQAGRIDRMLTVGAQYAYWRDYAAGRRLAMVVKWHVVMPALTA
                     VFGYFPGRRLGWLEDLPAGVANEWSFRRAAMEASYPAQERALVRERFTAVRAPILAIG
                     TTDDEYGTPQAIARGLAYYQGSERTQVLLSPADLGVNEIGHFDLFHSRHAGRFWPLTC
                     EWLAKGVNPWG"
     gene            1276..>1594
                     /locus_tag="VLL76_01400"
     CDS             1276..>1594
                     /locus_tag="VLL76_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV28172.1"
                     /translation="MAGTQTPTRDRIIQAATKLFYAEGIRAVSLDAIAEKAGVTKRTL
                     YYHFTSKDDLVAAYLEARDQPNLTLFRRWFTEAEGDLPEKVRAIFRNLAKSARGPKWR
                     GCGF"
BASE COUNT          285 a          556 c          510 g          243 t
ORIGIN      
        1 gcatcaagcg cctgccggtg acccgcgacg accgcgtcgt cggcatcgtc agccgctcgg
       61 acctcttgcg cgccctggcc cagcaacgca ccgagccggg cccggccgac gattccaccc
      121 tgcgcgaccg catgctcgac atgctggccg gccagccgtg gatcaacctg tcgctggtca
      181 acgtggtggt cgagaacggc accgcccgcc tgagcggcct gatcggctcg gaaaccgaac
      241 gccgcgccct gcacgtcgcc gcccacagcg ccggcatcac ccggatcgac gaccaactga
      301 gcatcggcgc ggcgccacgg gggatttagc cccagggatt gacgcctttc gccagccact
      361 cgcaggtcaa cggccagaac cgcccggcat ggcgggaatg gaacaggtcg aaatggccga
      421 tctcgttgac gcccaggtcg gccggcgaca gcaggacctg ggtccgctcg cttccttgat
      481 aataggcgag gccccgggcg atggcctgcg gggtgccgta ttcgtcgtcg gtggtgccga
      541 tggcgaggat cggggcgcgg acggcggtga agcgttccct gaccagcgcc ctttcctggg
      601 ccggatagct ggcctccatc gccgcccttc ggaaactcca ttcgttggcg accccggccg
      661 gaaggtcctc gagccatccc agccggcgac ccgggaaata tccgaagaca gcggtcaagg
      721 ccggcatcac gacgtgccat ttcaccacca tggcaagccg cctcccggcg gcgtagtcgc
      781 gccaatacgc atattgcgcg ccgaccgtca gcatgcggtc gatgcggccc gcctgggggg
      841 cgaagcccgg caggaagccg ccgatactgt gtccgaccac catcaacggg ccttcgggat
      901 tgtgcgcccg cgcccaggtg atggcggcgt cgaaatccag ttccccccag tcacgccagc
      961 gaaagcccgc gcctcgcatt ttgtcgggcc gcgacagccc gatcccgcga taatcgtagg
     1021 tgatgacggc aaagccccgc tcggccagga aggcggcgta gcggtgatag tagcgggcca
     1081 gcacgccggt cgccgggttg atgatgacgg ttccggcgaa atccccccga tgcggccatg
     1141 cgtgaccctg caggcgatag ccgtcccgac actgcagctc gaaccgcatt tcgccctcct
     1201 tcaacctgac aagctgcgga agggtacggt caaaccgctg gcatgtttat tcactggtcg
     1261 gtataccatg tgcccatggc aggcacgcaa actcccacca gggaccgcat catccaggcg
     1321 gcgaccaagc tgttctatgc agagggcatc cgcgcggtga gcctggatgc catagcggaa
     1381 aaggcggggg tcaccaagcg gaccctctac taccatttca ccagcaagga tgatctggtg
     1441 gccgcctatc tcgaggcgcg cgaccagccc aacctgaccc tcttcaggcg gtggttcacc
     1501 gaggccgaag gcgatttgcc cgagaaggtg cgggccatct tccgcaatct cgccaaatcc
     1561 gcgcgcggcc cgaaatggcg gggctgcggg ttcc
//
LOCUS       DATIKR010000089         2285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_1492, whole genome shotgun sequence.
ACCESSION   DATIKR010000089 DATIKR010000000
VERSION     DATIKR010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            309..1796
                     /locus_tag="VLL76_01405"
     CDS             309..1796
                     /locus_tag="VLL76_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4-diphosphocytidyl-2C-methyl-D-erythritol
                     kinase"
                     /protein_id="HSV28173.1"
                     /translation="MQFGEVRVDDAEGLILAHSTRLPTIMLKKGRVLTAADVAMLKAS
                     GINFVTGARLEAGDIGEDEAARMLAEAVAGEGVTVGPAFTGRCNLFAATRGVMVVDRE
                     RLDRLNLVDEAVTVATLHPFEVVSARQMLSTVKIIPFGVDRRVVDACAAYASSGGPLL
                     SVRPFRRRKVGIIATTLPGTRDSVLDAALAVTRARVETLDGDVTQELRCPHDVGSLER
                     TLGRALAAGCDEILVLGASATVDRRDVVPSAVLRAGGTIDHFGMPVDPGNLLLLAHVG
                     AVPVVNLPGCARSPKPNGLDWVLRRLAAGIAITPRDMMRMGAGGMLKESVPRRERVVP
                     GFIPERTPRVAAVIVADSEPEIVACAVESALAAGLEPIVVMVGPNADQIEEALPTCDV
                     RVVAGGKAPVAAGIAALPDGIDAAIVMDARQDWVTAAHLGELVKAFDADEGRAVVVTV
                     HRGGRGGPMLVGCDYFAALCEAAHPDDLLADHAEVVFEVVADDGP"
     gene            complement(1801..2016)
                     /locus_tag="VLL76_01410"
     CDS             complement(1801..2016)
                     /locus_tag="VLL76_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015957096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2795 domain-containing protein"
                     /protein_id="HSV28174.1"
                     /translation="MADVHTSSPTRELAKNLEGIDFPANKQKLVEWARSHGANEETIN
                     QLNGMPDEEYTSMADVFKGFGMKSEKK"
     gene            complement(2079..>2285)
                     /locus_tag="VLL76_01415"
     CDS             complement(2079..>2285)
                     /locus_tag="VLL76_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSV28175.1"
                     /translation="AFYLYADIGEMTNDAPEFCRRMLAEIGVAATPGTDFDPFDGHRT
                     MRFSFAGSTADMAEAARRLKAWRK"
BASE COUNT          335 a          785 c          784 g          381 t
ORIGIN      
        1 ggataggcca ccgagtaata ggcctgcgcc agatacatca ggcggtgcag cttttgcggc
       61 tgcagatatt cgttgtcgtt cagcgcgcgg tcggtgaacc acagcgccac gtccagacaa
      121 gacttcaccg cgaacggcat cggtccctct ccttacggcc cggtcgctct ttctttagcg
      181 ggcatggggc gcgaatcata gcgtcccaaa aggggatgcg ccaatccttg cgagatcgcc
      241 ggatggataa gcatggaatc cgacgataag acggatacaa tctgccccaa cagggaggag
      301 acagggcgat gcagttcggc gaggtccgcg tcgatgacgc ggagggcctg attctggcgc
      361 attcgacgcg cctgccgacg atcatgctga agaagggccg cgtgctcacc gccgccgacg
      421 tcgccatgtt gaaggcgtcg ggcatcaatt tcgtcaccgg cgcccggctg gaagcgggcg
      481 acatcggcga ggacgaggcg gcgcgcatgc tggccgaggc cgtcgccggc gagggcgtga
      541 ccgtcggccc cgccttcacc ggccgctgca acctgttcgc ggcgacgcgc ggcgtcatgg
      601 tggtggaccg cgaacgcctc gaccgcctga acctggtgga cgaagccgtc accgtcgcca
      661 ccctgcatcc gttcgaggtg gtcagcgccc gccagatgct gtccaccgtc aagatcatcc
      721 ccttcggcgt cgatcgccgc gtcgtcgatg cctgcgccgc ctatgccagt tccggcgggc
      781 cgctgctgtc ggtgcggccg ttccgccgcc gcaaggtcgg catcatcgcc accaccctac
      841 ccggcacccg cgacagcgtg ctggacgccg ccctggccgt cacccgcgcc cgcgtcgaaa
      901 cgctggacgg cgacgtcacg caggagctgc gctgcccgca cgacgtcggc tcgctggaac
      961 gcacgctggg ccgcgccctg gcggccggct gcgacgagat cctggtgctg ggcgcctcgg
     1021 ccaccgtgga ccgccgcgac gtggtgccgt ccgccgtgct gcgggccggc ggcaccatcg
     1081 accatttcgg catgccggtg gacccgggca acctgctgct gctggcccat gtcggagccg
     1141 tgccggtggt caacctgccc ggctgcgccc gttcacccaa gcccaacggc ctggactggg
     1201 tgctgcgccg cctggccgcc ggcatcgcca tcaccccgcg cgacatgatg cgcatgggcg
     1261 ccggcggcat gctgaaggaa tcggtgcccc ggcgcgagcg ggtggtgccc ggcttcatcc
     1321 ccgagcggac cccgcgcgtc gccgccgtga tcgtcgccga cagcgagccc gaaatcgtcg
     1381 cctgcgccgt cgaatcggcg ctggcggccg gattggaacc catcgtggtg atggtcggac
     1441 ccaacgccga ccagatcgag gaggcgctgc ccacctgcga cgtgcgcgtg gtggccggcg
     1501 gcaaggcgcc ggtcgcggcc ggcattgccg ccctgcccga cggcatcgat gccgccatcg
     1561 tgatggacgc gcgccaggac tgggtgacgg cggcccatct gggggaattg gtgaaggcgt
     1621 tcgacgccga cgaaggacgg gccgtcgtgg tcaccgtcca ccgcggcggg cgcggcgggc
     1681 cgatgctggt cgggtgcgac tacttcgccg ccctgtgcga ggcagcccat cccgacgacc
     1741 tgctcgccga ccacgccgag gtggtcttcg aagtggtggc cgacgacggc ccgtaacccc
     1801 ttacttcttt tcgctcttca tgccgaagcc tttgaagacg tcggccatcg aggtgtattc
     1861 ctcgtcgggc atgccgttca actggttgat ggtttcttcg ttggcgccgt ggctacgggc
     1921 ccactcgacc agcttctgct tgttggccgg gaagtcgatg ccttccaggt tcttggcgag
     1981 ttcacgtgtg ggggagctgg tatggacgtc agccatcgct cgtctcctct agctgttgct
     2041 atagggataa cgccccgacc tgtccggatg ttcccgccct acttccgcca ggccttgagc
     2101 cgccgcgccg cctcggccat gtcggcggtc gagccggcga acgagaagcg catggtgcgg
     2161 tggccgtcga acgggtcgaa atcggtcccc ggcgtggcgg ccacgccgat ctcggccagc
     2221 atgcggcgac agaattcggg ggcgtcgttg gtcatctcgc cgatgtcggc atagaggtag
     2281 aacgc
//
LOCUS       DATIKR010000090         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_194924, whole genome shotgun sequence.
ACCESSION   DATIKR010000090 DATIKR010000000
VERSION     DATIKR010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194924"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VLL76_01420"
     CDS             <1..297
                     /locus_tag="VLL76_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSV28176.1"
                     /translation="LLVGYEWYQAGGPTLPARHMTKGSEGPASKEKLQVFFDHLEREL
                     DECGFLRIPDKRPVMVRNIRNMFQRAHLTGQEVQTLHGIVHELVTYRHKKAEGK"
     gene            412..939
                     /locus_tag="VLL76_01425"
     CDS             412..939
                     /locus_tag="VLL76_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HSV28177.1"
                     /translation="MSTREQIIDAAMTIVREQGVAKLTLDAAAKQAGLSKGGVLYHFK
                     TKDDLIRGMVERLIGSCDILHHRYYAEEPEGPYRWARTVVRTAFDPNGPASDKVGGAL
                     LASVTVNPELAAPIHAKFDEWIARIHSDSPNPALAALVCMAMDGYYFERMMGLDLCNA
                     EQLEKIKQTALDLLK"
     gene            951..>1671
                     /locus_tag="VLL76_01430"
     CDS             951..>1671
                     /locus_tag="VLL76_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV28178.1"
                     /translation="MNKKRMIIMLVATAVIFGGVFGFVAFRNMMIKEYFATMKPPPVA
                     VTAQPAGEEHWRDVVPAVGTLAAVNGVDISASVSGLVREIAFESGQRVKRGQLLLRLD
                     SEVELGDLRSAQAEADLARATAARQRTLMRSDTVSQAALDKAEAELKVKEARVAALRA
                     QIEKKAVLAPFDGVLGVRKVDLGQYVQPGQAIVNLQDLSVMLADFSVSQKELALVAPG
                     HSIRMTTDAWPGREFTGTIEAV"
BASE COUNT          309 a          561 c          538 g          263 t
ORIGIN      
        1 ctgctggtcg gctatgaatg gtaccaggcc ggcggcccca ccctgcccgc ccgccacatg
       61 accaagggct cggaaggccc ggccagcaag gaaaagctgc aggtgttctt cgaccacctg
      121 gagcgcgagt tggacgaatg cggcttcctg cgcattcccg acaagcgccc ggtgatggtg
      181 cgcaacatcc gcaacatgtt ccagcgcgcc cacctgacgg gacaggaagt gcagaccctg
      241 cacggcatcg tccacgagct ggtgacctat cgccacaaga aggccgaggg gaagtagccg
      301 cctttttcac cgaccctggt gaaatccaca ggtagacgcg tcgcatctgc gctgccatat
      361 accgtccagc cggtacagtg aaccgtccgg acggtatagt aggaatcgct gatgagcact
      421 cgcgaacaga tcattgacgc ggcgatgacg atcgtccgcg aacagggcgt cgccaagctg
      481 acgctggacg ccgccgccaa gcaggccggg ctgtccaagg gcggcgtgct gtatcacttc
      541 aagaccaagg acgacctgat ccgcggcatg gtcgagcggc tgatcggctc gtgcgatatc
      601 ctgcaccacc gctattacgc cgaggaaccc gagggcccct accgctgggc gcgcaccgtc
      661 gtgcgcaccg ccttcgaccc caacggcccg gccagcgaca aggtcggcgg cgcgctgctg
      721 gcctcggtga ccgtcaaccc ggaactggcc gcgcccatcc acgccaaatt cgacgaatgg
      781 atcgcccgca tccattccga cagccccaac cccgccctcg ccgccttggt ctgcatggcc
      841 atggatggct attacttcga gcggatgatg ggcctcgacc tctgcaatgc ggaacagctt
      901 gagaagatca agcagaccgc cctcgatttg ctcaagtgac ggagccaaga atgaataaga
      961 aacgcatgat catcatgctg gtcgccaccg ccgtgatctt cggcggcgtg ttcggcttcg
     1021 tggcgttccg caacatgatg atcaaggaat acttcgccac catgaagccg ccgccggtgg
     1081 cggtgacggc ccagccggcc ggcgaggagc attggcgcga cgtggtgccg gccgtcggca
     1141 cactggcggc cgtcaacggc gtcgacatct cggcgtcggt gtcggggctg gtgcgcgaga
     1201 tcgctttcga atccggccag cgggtcaagc gcggccagtt gctgctgcgc ctcgattccg
     1261 aggtcgagct gggcgacttg cgctcggccc aggccgaggc cgacctcgcc cgcgccaccg
     1321 ccgcccgcca gcgtacgctg atgcgctcgg acaccgtcag ccaggcggcg ctggataagg
     1381 ccgaggccga actcaaggtc aaggaggcgc gcgtcgccgc gctacgggcg cagatcgaga
     1441 agaaggcggt gctggcgccg ttcgacggcg tgctgggcgt gcgcaaggtc gatctgggcc
     1501 agtacgtcca gcccggtcag gccatcgtca acctgcagga cctgtcggtg atgctggccg
     1561 atttctcggt gtcgcagaag gaactggcac tggtcgcgcc cggccattcc atccgcatga
     1621 ccaccgacgc ctggcccggc cgtgaattca ccggcaccat cgaggcggtc g
//
LOCUS       DATIKR010000091         2084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_122441, whole genome shotgun sequence.
ACCESSION   DATIKR010000091 DATIKR010000000
VERSION     DATIKR010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122441"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..769
                     /locus_tag="VLL76_01435"
     CDS             17..769
                     /locus_tag="VLL76_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSV28179.1"
                     /translation="MAGHSQFKNIMHRKGAQDAKRAKVFTKLIRELTVSAKSGQPDPV
                     ANPRLRAAIQAARAANMPKDTMERAIKRGAGGDDGANYEEVRYEGYGPGSVAIIVEAL
                     TDNRNRTASEVRSAFSKNGGALGETNSVSFMFDRVGAIRYPASAAGAEAMFEAALEAG
                     AENVDSSEDGHEITCNPDDLATVRDALEATFGTPEYARLDWQPQTTVPVTDEDTAKTL
                     LKLLDILEDNDDVQRVQANFEIPDEIMEKLSA"
     gene            890..1390
                     /gene="ruvC"
                     /locus_tag="VLL76_01440"
     CDS             890..1390
                     /gene="ruvC"
                     /locus_tag="VLL76_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HSV28180.1"
                     /translation="MRVLGLDPGLRNTGWGIIDVIDNRLRHVADGVVKSDDKLSLAER
                     LAQLHQGVRAVIAQWEPEEAAVEETFVNKNPESTLKLGQARGVVLLAPALMGLPVGEY
                     AAALVKQSVVGTGRAQKDQVGMMVRTLLPGCLVKSPDAADALAVAICHSHHRGTAKRL
                     AQAVAR"
     gene            1497..>2084
                     /gene="ruvA"
                     /locus_tag="VLL76_01445"
     CDS             1497..>2084
                     /gene="ruvA"
                     /locus_tag="VLL76_01445"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HSV28181.1"
                     /translation="MIAKLKGLIDSLGDDYAIVDVNGVGYLVFCSGRTLARLETGLAA
                     ALHIETHVREDHIHLYGFLDAAEREWFNLLTTVQGVGAKVGLAILSVASPEQLLQTIA
                     AQDKAMLTRASGVGPKLAVRILTELKDKAGKLALGAFSPAQAAVQNAAPMPAEAGGVM
                     EDAISALVNLGYKRIEAFEAVGQAARELPDGTDAST"
BASE COUNT          377 a          684 c          739 g          284 t
ORIGIN      
        1 tagggtttgt gcgagaatgg ccggtcattc ccagttcaag aacatcatgc accgcaaggg
       61 cgcgcaggac gccaagcgtg ccaaggtctt caccaagctg atccgcgaat tgacggtttc
      121 ggccaagtcg ggccagcccg acccggtggc gaacccgcgc ctgcgcgccg ccatccaggc
      181 ggcccgcgcc gccaacatgc ccaaggacac catggagcgc gccatcaagc gcggcgccgg
      241 tggcgacgat ggggccaatt acgaggaagt gcgctacgag ggctatgggc caggctcggt
      301 ggcgatcatc gtcgaggcgc tgaccgacaa ccgcaaccgc accgcctcgg aagtgcgctc
      361 ggccttctcg aagaacggcg gcgccctggg cgagaccaat tcggtgtcgt tcatgttcga
      421 ccgcgtcgga gccatccgct atcccgccag cgccgccggt gccgaggcca tgttcgaggc
      481 cgccctggaa gccggcgccg agaacgtgga ctccagcgag gacggccacg agatcacctg
      541 caaccccgac gacctggcga ccgtgcgcga cgcgctggag gccaccttcg gcaccccgga
      601 atacgcccgc ctggactggc agccgcagac caccgtgccg gtgacggacg aggacaccgc
      661 caagacgctg ctgaagctgc tggacatcct ggaagacaac gacgacgtcc agcgcgtcca
      721 ggccaatttc gagattccgg acgagatcat ggagaagttg agcgcgtaac ggagcgagcc
      781 gcaggcgagg gactgggtcg ttgaggcccc gcgaagcgct agcggagcgt agccaagggg
      841 cgcggatgcg ccccgcccgg cgcctgaggg cttatgtaag gggagccgaa tgagggtctt
      901 ggggctcgat ccggggctgc gcaacaccgg ctgggggatc atcgacgtga tcgacaatcg
      961 cctgcgccat gtggccgacg gcgtggtgaa gtccgacgac aagctgagcc tggccgagcg
     1021 cctggcgcaa ttgcatcaag gcgtgcgcgc cgtcatcgcc cagtgggagc ccgaggaagc
     1081 cgcggtggaa gagaccttcg tcaacaagaa cccggaaagc accctcaagc tgggtcaggc
     1141 gcgcggcgtc gtgctgctgg cgccggcgct gatggggctg ccggtgggcg aatacgccgc
     1201 cgccttggtc aagcaatcgg tggtcggcac cggccgcgcc cagaaggatc aggtcggcat
     1261 gatggtgcgc accctgctgc ccggctgcct ggtgaaaagc cccgacgccg ccgatgccct
     1321 ggcggtcgcc atctgccatt cccaccacag gggcacggcc aagcggctgg cccaggcggt
     1381 ggcaagatga tcggagcgag cgaagcgagg gactggcgcg ttgagcgccc gcgagcttta
     1441 gcgagcgtaa gccaagcgcg cggatgcgcg cgcccggcgc ttgagggctc acaaccatga
     1501 tcgccaagct caagggcctg atcgacagcc tgggcgacga ttacgccatc gtcgatgtga
     1561 acggcgtcgg ctatctggtg ttctgctcgg gccgcacgct ggcgcggctg gaaaccgggc
     1621 tggctgccgc gctgcacatc gagacccacg tgcgcgagga ccacatccac ctctacggct
     1681 tcctcgatgc cgccgagcgc gaatggttca acctgctgac cacggtccag ggcgtcggcg
     1741 ccaaggtggg gctggccatc ctgtcggtcg ccagccccga gcaattgctg cagaccatcg
     1801 cggcgcagga caaggccatg ctgacgcggg ccagcggcgt cggccccaag ctggcggtgc
     1861 gcatcctgac cgaattgaag gacaaggccg gcaagctggc cttgggtgcc ttctccccgg
     1921 cgcaggcggc ggtgcagaac gccgcgccca tgccggccga ggcgggcggg gtgatggaag
     1981 acgccatctc ggcgctggtc aacctgggct acaagcggat cgaggcgttc gaggcggtgg
     2041 ggcaggcggc gcgtgaattg cccgatggca ccgacgcctc gacc
//
LOCUS       DATIKR010000092         1703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_122474, whole genome shotgun sequence.
ACCESSION   DATIKR010000092 DATIKR010000000
VERSION     DATIKR010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122474"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VLL76_01450"
     CDS             complement(<1..292)
                     /locus_tag="VLL76_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV28182.1"
                     /translation="MTSQSVVKAPDPQDTAPAVSAVKQSSRQSRHLAQAVQLEESGTD
                     PLVRFTMFASSLAVFAFVVWAALTNIEEVAIADGTIVPTGSVQTIQHLEGGIV"
     gene            complement(295..>1703)
                     /locus_tag="VLL76_01455"
     CDS             complement(295..>1703)
                     /locus_tag="VLL76_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV28183.1"
                     /translation="ILSLPPGFTERATIGAQVARIKDFESVREFFTGPLATVFMELPF
                     AIFYFAIIFMLGGVLALVPVIASILFVILGMVSLPVVRKNVAIASRAASRRQEFLVET
                     LGKMRAVKLSAGEPIWMNRYRDMSARAAYGGFKNGIFAIVITTLSNVLIVGSGMATIA
                     VGVLGVIDGDMTMGGLIAAMMLVWRVLSPLQTGFTLIQRVEQVRGSIKQIDALMNLKP
                     ERDPRAIVAPLKNVRGRVVFSRVSLRYTNEADPALVGVSFEVEPGEVVAVTGRNGSGK
                     STILKLLLGLYAPQAGSIRIDAADIRQIDPVELRHAVSYVPQVCNLFFGTVAQNLRLA
                     HPTATDADIRWSCEMADVWDEIMALPRGLETRIGDGASDHLSTSFVQKLSLARGYLKR
                     APIMLFDEPVNGLDFEGDRQFMQAVETFRGQSTIFMVTHRPSHLRIADRILVFDGGYL
                     RLAGPAEEVRARIPPDLI"
BASE COUNT          302 a          548 c          593 g          260 t
ORIGIN      
        1 cgacgatgcc gccctccagg tgctggatgg tctgcaccga tccggtcggc acgatggtgc
       61 cgtcggcgat ggcgacctcc tcgatgttgg tcagggcggc ccacaccacg aaggcgaaga
      121 ccgccaagct ggacgcgaac atggtgaagc ggaccagcgg atcggtgccg ctttcctcga
      181 gctgcaccgc ctgggccagg tggcgcgatt gccggctcga ctgtttgacc gcggacaccg
      241 ccggagcggt gtcctgggga tcgggggctt tgacgacgct ttggctggtc atggtcagat
      301 caggtccggg gggatacggg cacgcacttc ttcggccggg ccggccaggc gcagataacc
      361 gccgtcgaac accaggatgc ggtcggcgat ccgcagatgg ctggggcggt gcgtcaccat
      421 gaagatggtg gattggccgc ggaaggtctc gaccgcctgc atgaactggc ggtcgccctc
      481 gaagtcaagg ccgttgaccg gctcgtcgaa cagcatgatg ggggcgcgct tgaggtaacc
      541 acgcgccagc gacagctttt gcacgaagct ggtggacagg tggtcgctgg cgccgtcgcc
      601 gatgcgggtc tcgagcccac gcggcagcgc catgatctcg tcccacacgt ccgccatctc
      661 gcacgaccag cggatgtcgg cgtcggtggc ggtgggatgg gccaggcgca ggttctgcgc
      721 cacggtgccg aagaacaggt tgcacacctg cggcacatag gacaccgcgt ggcgcagctc
      781 gaccgggtcg atttggcgga tgtcggcggc gtcgatgcgg atcgagccgg cctgcggcgc
      841 gtaaagcccc agcagcagct tcaggatggt ggacttgccc gagccgttgc ggccggtcac
      901 ggcgaccact tcgcccggct cgacctcgaa cgaaacgccc accagcgccg ggtcggcttc
      961 gttggtgtag cgcaggctga cgcgggaaaa caccacccgg ccgcggacgt tcttcagcgg
     1021 cgccacgatg gcgcggggat cgcgctcggg cttcaggttc atcagggcgt cgatctgctt
     1081 gatcgagccg cgcacctgct cgacgcgctg gatcagggtg aagccggtct gcagcggcga
     1141 tagcacgcgc cacaccagca tcatggcggc gatcaggccg cccatggtca tgtcgccatc
     1201 gatcacgccc agcacgccga ccgcgatggt tgccatgccc gagcccacga tcagcacgtt
     1261 ggacagggtg gtgatgacga tggcgaagat gccgttcttg aagccgccat aggcggcgcg
     1321 ggccgacata tcgcgatagc ggttcatcca gatcggctca cccgccgaca gcttgaccgc
     1381 ccgcatcttg cccagcgtct cgaccaggaa ttcctggcgc cgcgacgccg cgcgcgaggc
     1441 gatggcgacg ttcttgcgca ccaccggcag cgacaccatg cccaggatga cgaacaggat
     1501 cgaggcgatc acgggcacca aagccagcac gccgcccagc atgaagatga tggcgaaata
     1561 gaagatggcg aacggcagtt ccatgaacac cgtcgccagc gggccggtga agaactcgcg
     1621 caccgactcg aagtccttga tgcgcgccac ctgggcaccg atggtcgcgc gctcggtgaa
     1681 gcccggcggc agcgacagga tgt
//
LOCUS       DATIKR010000093         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86131, whole genome shotgun sequence.
ACCESSION   DATIKR010000093 DATIKR010000000
VERSION     DATIKR010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86131"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VLL76_01460"
     CDS             complement(<1..546)
                     /locus_tag="VLL76_01460"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017937541.1"
                     /note="catalyzes the formation of malate from glyoxylate
                     and acetyl-CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HSV28184.1"
                     /translation="MTDRVQTGGISIAKPLYDFITNEAIPGTGLAPEQVWNGLDALLR
                     DLAPRNRALLARRDELQTQIDAWHRDRRGKPLDRAEYTRFLRDIGYLLPEGPDFQVGT
                     AKVDPEISTLAGPQLVVPVMNARYALNAANARWGSLYDALYGTDALPDSEGAERGAGY
                     NPRRGALVIAQARQFLDRAVPL"
     gene            649..1266
                     /locus_tag="VLL76_01465"
     CDS             649..1266
                     /locus_tag="VLL76_01465"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV28185.1"
                     /translation="MIDALCHIFVFVPTGQIPDCGLTESFRRAHPGQGTANACFCFDN
                     AYLEVLWVEDWNDVRSPPIAATRLAERADWRQGGASPFGIALRTDLPFPAWPYRPPYL
                     PPGMAIPVATDSEDPRQPFLFRSPGSTRPDQWTDGRAGNRQAPAGLSEIVNLRLTMPD
                     TPGPALMALAERGLLSVHRGAHRLDITLSGNGGDRVLSLPDFRWG"
     gene            1323..1460
                     /locus_tag="VLL76_01470"
     CDS             1323..1460
                     /locus_tag="VLL76_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28186.1"
                     /translation="MFMFFNAIVIIVTGIASAAAISADSARDERCASNPTASECLQSE
                     R"
BASE COUNT          251 a          541 c          532 g          279 t
ORIGIN      
        1 cagcggcacc gcccggtcga ggaattgccg cgcctgggcg atcaccaggg cgccccggcg
       61 cggattgtag ccggcgccac gctcggcccc ctcgctatcg ggcagggcgt cggtgccgta
      121 gagcgcgtcg tacaggctgc cccagcgggc gttggcggcg ttcagcgcat agcgcgcgtt
      181 catcaccggc accaccaatt gcggcccggc cagggtcgaa atctcgggat cgactttggc
      241 ggtgccgacc tggaagtcgg ggccttccgg tagcaggtag ccgatgtcgc gcaggaaacg
      301 ggtgtattcc gcgcggtcga gcggcttgcc ccggcggtcg cggtgccagg cgtcgatttg
      361 cgtctgcaac tcgtcgcggc gcgccaacag ggcgcggttg cgcggtgcca ggtcgcgcag
      421 cagggcatcg agtccgttcc agacctgctc gggggcaagg ccggtgccgg gaatggcctc
      481 gttggtgatg aagtcgtaaa gcggtttggc gatggaaatc ccgccggtct ggacccgatc
      541 cgtcacgtcg tcctcccacg attttccggc atcatgccat acaccggtag attggtacta
      601 ccagtcgaag gtccaacccc aggcatcgcg acgtgctatc ctgcggtcat gatcgacgcg
      661 ctgtgccaca tcttcgtctt cgttcccacc ggccagattc ccgattgcgg gctgacggag
      721 agctttcgcc gcgcccatcc cggccaaggg accgccaacg cctgcttctg cttcgacaac
      781 gcctatctcg aggtgttgtg ggtcgaggat tggaacgacg tccggtcgcc acctatcgcg
      841 gccacccgcc tggccgagcg cgctgattgg cgccagggcg gcgcgtcgcc gttcggaatc
      901 gccttgcgca ccgacctgcc gttccctgcc tggccatacc ggccgcctta cctgccgccg
      961 ggaatggcga taccggttgc gacggacagc gaggacccgc gccagccctt cctgttccgc
     1021 tcgccgggga gtacgcggcc cgaccaatgg accgacggcc gggcggggaa tcggcaagcg
     1081 cccgcgggcc tcagcgaaat cgtcaacctt cggctgacga tgccggatac gccggggccg
     1141 gcgctgatgg ccttggccga gcgtggtctg ttgtccgtcc accggggcgc ccacaggctc
     1201 gacatcacgc tgtccggcaa tggcggcgac agagtgctgt cgctccccga ttttaggtgg
     1261 ggctaggaac cgaccttgtt cgcctctgtt gctccggaag gagtgcaacg gaggtggcaa
     1321 tcatgttcat gttcttcaac gcgatcgtga tcatcgtgac gggcatcgcc tcggccgccg
     1381 ccatcagcgc ggattcggcc cgcgacgaac gctgcgccag caacccgacg gcaagcgagt
     1441 gcctgcaaag cgagcggtaa aaaagtcccg tcattcccgc gaaagcggga atccatgcat
     1501 cgaccactcg ctatctagtg gtcaggcacc gcgcccgccc caacatggat ccccgccttc
     1561 gcggggatga cgaggtggct ttttccgcgg cgcgttagag ccc
//
LOCUS       DATIKR010000094         2498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_98221, whole genome shotgun sequence.
ACCESSION   DATIKR010000094 DATIKR010000000
VERSION     DATIKR010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98221"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1671
                     /locus_tag="VLL76_01475"
     CDS             <1..1671
                     /locus_tag="VLL76_01475"
                     /inference="COORDINATES: protein motif:HMM:TIGR01842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HSV28187.1"
                     /translation="TFGAAALFSLFANLLILSVPVFSLQVYDRVLSSRSGATLTMLLL
                     VVIGALVVHALLEGVRSRLMVHVGLWLERAWAPALLERAIQRGPLQGSAMGANTLRDL
                     GAVRGFVGGPGIFNLFDAPWVPIYAAVMFLLHPALGWLTTVGAIILFGLAAASELATR
                     GPLRTGGQRLALQQQRADDFVRRAEVIEAMGMLPGIRSLWAAEAGRTQEVMATGWHRS
                     AMLAASARFLRFLVQVLVIGLGAWLAINDQLSAGGVIAGSIILSRALAPVESLVGSWK
                     NFVGARAALTRLNEELGRPPPRRATTVLPKPNGHLALERVSYELTDPERQILRDIEFE
                     LGPGESLGIIGPSAAGKSTLARVILGIQAPTRGRARLDGADVSCWCREDLGRHIGYLP
                     QDIELFAGTVKRNIARMGEPDDAQAIEAAQQAGVHDMVLRLPHGYDTEISEASRNLSG
                     GQRQRIAIARAFYGDPRLLVLDEPNSNLDAEGENALIRALLRAKEKRVTTIVIAHRAR
                     VLMTVDKLLLLRDGRIEMFGQRDEVMARVLPQPNQGQIKPSPTVREVK"
     gene            1668..>2498
                     /locus_tag="VLL76_01480"
     CDS             1668..>2498
                     /locus_tag="VLL76_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV28188.1"
                     /translation="MMDVTEKVGGGTAIRVGLATIVVAFGGFGTWAALAPLDQAAVAS
                     GEVQVEHYRKTVQHREGGIVRSILVRDGAQVAAGQPLVLLDDTAVRARWSQLRSQYFD
                     ALANKARLTAERDGARAIDFNSVFKDPDSPRVQEVRRAQENLFRARRTMLDGQVAVLH
                     RRVEQFQHEAEALKVERLSADRQLELVREEVGTVERLVKRGLALKPRLLALQREAAKL
                     EGQRDDYAARIARIGQSIAATELEISNVAYKHMDEVAKGLREVETQIRDLEQQITAAE
                     D"
BASE COUNT          367 a          887 c          860 g          384 t
ORIGIN      
        1 accttcgggg cggcggcgct cttcagcctg ttcgcgaatt tgttgatcct ttcggtgccc
       61 gtcttttcat tgcaggtcta cgaccgcgtg ctgtccagcc gctcgggcgc caccttgacc
      121 atgctgttgc tggtggtgat cggcgccctg gtggtgcatg ccctgctcga gggcgtgcgg
      181 tcgcggctga tggtccatgt cggcctgtgg ctggagcgcg cctgggcgcc ggccctgctg
      241 gaacgcgcca ttcagcgcgg cccgctgcaa ggatcggcca tgggcgccaa caccctgcgc
      301 gaccttggcg ccgtgcgcgg cttcgtcggc ggacccggca tcttcaacct gttcgacgcg
      361 ccatgggtac cgatctacgc cgccgtcatg ttcctgctgc acccggcgct gggttggctg
      421 accacggtcg gcgcaatcat cctgttcggc ctggccgccg ccagcgaact ggcgacgcgc
      481 gggccgttgc gcaccggcgg ccagcgcctg gcgctgcagc agcagcgggc cgacgatttc
      541 gtccgccgcg ccgaggtcat cgaggccatg ggcatgttgc cggggatccg gtcgctgtgg
      601 gccgccgagg ccggccgcac ccaggaggtc atggccaccg gctggcatcg ttccgccatg
      661 ctggcggcat cggcccgctt cttgcgcttc ctggtgcagg tgctggtgat cgggctggga
      721 gcctggctcg ccatcaacga ccaattgtcg gccggcggcg tgatcgccgg ctcgatcatc
      781 ctgtcgcggg ccttggcgcc ggtggaaagt ctggtcggca gttggaagaa cttcgtcggc
      841 gcccgcgccg ccctgacccg cctgaatgag gagctcggcc ggccgccgcc gcgccgcgcc
      901 accaccgtgc tgcccaagcc caacggccac ctggcactgg agcgcgtcag ctacgaactg
      961 accgatcccg agcggcagat cctccgggac atcgaattcg agctgggtcc cggcgaatcg
     1021 ctgggcatca tcggcccctc ggccgccggc aagtccaccc tggcccgcgt catcctgggc
     1081 atccaggcgc cgactcgcgg ccgcgcccgg ctggacggcg ccgacgtgtc gtgctggtgc
     1141 cgcgaggacc ttggccgcca tatcggctac ctgccccaag acatcgagct gttcgccggc
     1201 acggtcaagc gcaacatcgc ccgcatgggc gagcccgacg atgcccaggc catcgaagcg
     1261 gcgcagcagg ccggcgtcca cgacatggtc ctgcgcctgc cccacggcta cgacaccgag
     1321 atcagcgagg cgtcgcgcaa tttgtcgggc ggccagcgcc agcgcatcgc catcgcccgc
     1381 gccttctatg gcgacccccg gctgctggtg ctggacgagc ccaattccaa cctggacgcc
     1441 gagggcgaga acgccctgat ccgagccctg ttgcgggcca aggaaaagcg cgtcaccacc
     1501 atcgtcatcg cccatcgcgc ccgcgtgctg atgacggtgg acaagctgct gctgctgcgc
     1561 gacggccgca tcgagatgtt cggccagcgc gacgaggtca tggcgcgcgt gctgccccag
     1621 cccaaccagg gccagatcaa gccgtccccc accgtgcggg aggtcaaatg atggacgtga
     1681 cggaaaaggt cggcggcggc accgccatcc gggtcggact ggccaccatc gtggtggcgt
     1741 tcggcggctt cggcacctgg gcggccttgg ctccgctgga ccaggccgcc gtcgccagcg
     1801 gcgaggtcca ggtcgagcat taccgcaaga cggtgcagca ccgcgaaggc ggcatcgtgc
     1861 gctcgatcct tgtgcgtgac ggcgcccagg tcgcagccgg ccagccgctg gtgctgctgg
     1921 acgacaccgc cgtgcgcgcc cgctggtccc agttgcgcag ccagtatttc gacgcccttg
     1981 ccaacaaggc gcgcctgacc gccgagcgcg acggcgcccg cgccatcgat ttcaattcgg
     2041 tgttcaagga ccccgattcg ccaagggtgc aggaagtccg ccgcgcccag gaaaacctgt
     2101 tccgcgcccg ccgcaccatg ctggacggcc aggtggcggt gctgcaccgc cgggtcgagc
     2161 agttccagca cgaggccgag gcgctgaagg tcgagcggct gtcggccgac cgccagttgg
     2221 agctggtgcg ggaagaggtc ggcaccgtcg agcggctggt caagcgcggc ctggcgctga
     2281 agcccaggct gctggctttg cagcgcgagg ccgccaagct ggaggggcag cgcgacgact
     2341 acgccgcccg catcgcccgc atcggccagt ccatcgcggc gaccgagctt gagatctcga
     2401 acgtcgccta caagcacatg gacgaggtcg ccaagggatt gcgcgaggtg gaaacccaga
     2461 tccgggacct ggaacagcag atcaccgccg ccgaggac
//
LOCUS       DATIKR010000095         3353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_110377, whole genome shotgun sequence.
ACCESSION   DATIKR010000095 DATIKR010000000
VERSION     DATIKR010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110377"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..1199)
                     /locus_tag="VLL76_01485"
     CDS             complement(102..1199)
                     /locus_tag="VLL76_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV28189.1"
                     /translation="MQRGLAERLICLHDEIKGDNSLTALARIAVALYDQSTDTLKTFI
                     HSSEGESPLDHVLARLSDLPSLQQLAWTGARRTINDLEKAAENGQEYAARLVAAGYRS
                     SYTVPVQHKGTFYGFLFFNSCDTDFFTPAVIHRLRPYAEVISLAVMRELDTVRMMQAA
                     VKVIRSVSSARDEETGSHLARMARYARLIAVKLADKYGLTDEFVEFVFQFCPLHDVGK
                     VAVPDAILLKPGKLTNEEFEVMKSHVTRGVEIIDLMMRDFGLQAMPHFDLLRNICAFH
                     HEAIDGSGYPYKRKGDEIPIEARIAAVADVFDALTSARPYKKAWTNDEALALLKEQAG
                     RKFDPECVQVMLDNIPAIEEIQAQFSESIFD"
     gene            complement(1356..2984)
                     /locus_tag="VLL76_01490"
     CDS             complement(1356..2984)
                     /locus_tag="VLL76_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HSV28190.1"
                     /translation="MPSQYEQHLDKNPANYVPLTPIGFLERAAYVYPDRVSVIHGDVR
                     YTWKQSYERARRLASALSKRGIGVGDTVAVMAPNIPEIFEAHFGVPMIGAVLNAQNIR
                     LDAEALAFIFDHGEAKVLITDREFSPVIKKALGICKVKPIVIDIDDPQAKGGELLGEM
                     TYEQFLETGDPDFAWRQPEDEWEAIALNYTSGTTGNPKGVVYHHRGAYLNALGNAVTW
                     GMGHHPVYLWTLPMFHCNGWCFPWTITAMVGTHVCLRRVDAAHMFDAIDKYGVTHLCG
                     APIVMGMLINATDAERKPLRHTVEFMTAAAPPPAAVIGRLESQGFKITHVYGLTEVYG
                     PVSVCAWHEEWDQKPLDERARLKSRQGVRYVVQEGLMVADPTTLEPVPKDGQTMGEVF
                     FRGNVTMKGYLKNPKATDDAFAGGWFHTGDLGVWHPDGYIDLKDRSKDIIISGGENIS
                     TIEVEGVLYQHPAVMEAAVVARPDEKWGETPCAFVTLKEGATVTEQEIMDFARTKLAH
                     FKCPRTVVFGPLPKTSTGKIQKFVLRETARKLNG"
     gene            3128..>3353
                     /locus_tag="VLL76_01495"
     CDS             3128..>3353
                     /locus_tag="VLL76_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSV28191.1"
                     /translation="MSFDMRLALVINRSAGTFRRLPILPTVDAIADVLRQAGHIVEVQ
                     VVGHRDLPSALSGCARRRDIDAVIAGGGDGT"
BASE COUNT          560 a         1056 c         1122 g          615 t
ORIGIN      
        1 cgtcggaggc gccccggggg cgaagccgac agccatgaaa cgtcctcccg atacggccgc
       61 ggtttacccc gcttttggcc ttgtgcgtac tatacccgaa ctcagtcgaa gatggactcg
      121 ctgaactgcg cctggatctc ctcgatggcg ggaatgttgt cgagcatgac ctggacgcat
      181 tcgggatcga acttgcgccc cgcctgctcc ttgagcagag ccagcgcctc gtcgttggtc
      241 cacgccttct tgtaggggcg cgccgaggtc agggcgtcga acacgtcggc gacggccgcg
      301 atgcgggcct cgatggggat ttcgtcgccc ttgcgcttgt agggatagcc cgagccgtcg
      361 atggcttcgt ggtggaaggc gcagatgttg cgcagcaggt cgaaatgcgg catcgcctgc
      421 agcccgaaat cgcgcatcat cagatcgatg atctcgacgc cacgcgtcac gtggctcttc
      481 atgacctcga attcctcgtt ggtcagcttg ccgggcttga gcaggatggc gtcgggcacc
      541 gccaccttgc cgacgtcgtg cagcgggcag aactggaaca cgaattccac gaattcatcg
      601 gtcaggccgt atttgtcggc gagcttgacc gcgatcaggc gggcatagcg cgccatgcgc
      661 gccaggtgcg agccggtctc ctcgtcgcgc gccgacgaca ccgaacggat caccttcacc
      721 gccgcctgca tcatgcgcac ggtgtcgagt tcgcgcatca ccgccagcga gatcacctcg
      781 gcataggggc gcaggcgatg gatcacggca ggcgtgaaaa aatcggtgtc gcaggaattg
      841 aagaacagga agccgtagaa agtgcccttg tgctgcaccg gcacggtgta gctggaacgg
      901 tagcccgccg ccaccagccg ggcggcgtat tcctggccgt tctcagccgc cttctccagg
      961 tcgttgatgg tgcgccgggc gccggtccag gccagttgct gcaggctggg caggtcggac
     1021 agccgcgcca gcacgtggtc gagcgggctt tcgccctcgc tggaatggat gaaggtcttc
     1081 agcgtgtcgg tggattggtc ataaagcgcg accgcgatac gggccagcgc cgtcagcgag
     1141 ttgtcgccct tgatttcatc atgaagacag atcagccgct cggccagacc ccgttgcatg
     1201 aaaggcaagg cagagtgcgc cacccgttcc cccgattgat tacgtccgtc ccaccggaaa
     1261 acgttacccg atgtgcggat cgcacgccaa gatgtaaacg gccctacccg ggaaaagaag
     1321 gcgccaggat cgcggccgat cctggcgccc ggtaatcaac cgttcagttt acgcgcggtc
     1381 tcgcgcagca cgaatttttg gatcttgccc gtcgaagtct tgggcagcgg gccgaacacc
     1441 accgtacgtg ggcacttgaa atgggccagt ttggtgcggg cgaaatccat gatttcctgc
     1501 tcggtgaccg tggcgccttc cttcagggtg acgaaggcgc agggcgtctc gccccacttc
     1561 tcgtccggac gcgccaccac ggcggcttcc atcaccgccg gatgctggta cagcacgccc
     1621 tcgacctcga tggtcgagat gttctcgccg cccgagatga tgatgtcctt ggagcggtcc
     1681 ttgaggtcga tgtagccgtc gggatgccac acgcccagat cgccggtgtg gaaccagccg
     1741 ccggcgaagg cgtcgtcggt cgccttgggg ttcttcagat agcccttcat ggtgacgttg
     1801 ccgcggaaga acacctcgcc catggtctgg ccgtccttgg gcaccggctc cagcgtggtc
     1861 gggtcggcca ccatcaggcc ttcctgcacc acgtagcgca caccctggcg cgacttcagg
     1921 cgggcccgct cgtccagcgg cttctggtcc cattcctcgt gccaggcgca caccgacacc
     1981 gggccgtaga cctcggtcag gccgtagacg tgggtgatct tgaagccttg gctctccagc
     2041 cggccgatga cggcggcggg cggcggcgcg gcggcggtca tgaactcgac ggtgtggcgc
     2101 aggggcttgc gctcggcatc ggtggcgttg atcagcatgc ccatgacgat gggggcgccg
     2161 cacagatggg tgacgccgta cttgtcgatg gcgtcgaaca tgtgggcggc gtcgacgcgg
     2221 cgcaggcaga catgggtccc gaccatggcc gtgatggtcc acgggaagca ccagccgttg
     2281 cagtggaaca tgggcagggt ccacagatag accggatggt gccccatgcc ccaggtcacg
     2341 gcgttgccca gcgcgttcag ataggcgccg cgatgatggt aaaccacgcc cttggggttg
     2401 ccggtggtgc cggaggtgta gttgagcgct atggcttccc actcgtcctc gggctggcgc
     2461 caggcgaagt cggggtcgcc ggtctcgagg aattgctcgt aggtcatctc gcccagcaac
     2521 tcgccgccct tggcctgggg gtcgtcgatg tcgatgacga tcggcttgac cttgcagatg
     2581 cccagcgcct tcttgatcac cggcgagaat tcgcggtcgg tgatcagcac cttggcctcg
     2641 ccatggtcga agatgaaggc cagcgcctcg gcgtcgaggc ggatgttctg ggcgttcagc
     2701 acggcgccga tcatgggcac gccgaaatgc gcctcgaaga tctcggggat gttgggcgcc
     2761 atcaccgcca ccgtgtcgcc cacgccgatg ccgcgcttgg acagcgccga ggccagccgg
     2821 cgggcgcgct cgtaggattg cttccaggtg tagcggacgt cgccgtggat caccgacacg
     2881 cggtcgggat agacataggc ggcacgctcg aggaacccga tgggagtgag cggaacgtaa
     2941 ttcgccgggt tcttgtcgag atgttgttcg tattggctcg gcattggttc ctcccgaagg
     3001 gcaagcgaaa aggttggccc ggcccacccg tatgcatggg cgcggccaag aagaatgtcg
     3061 tggtcggcgc cgattttcaa caatggtaca ggcgtgcgta aaggttgaca gcgcccctgt
     3121 ttggggcatg tctttcgata tgcgccttgc cctggtcatc aaccgatcgg ccggcacctt
     3181 ccgccggctg cccatcctgc ccaccgtgga cgccatcgcc gacgtcctgc gccaggcggg
     3241 ccacatcgtg gaagtccagg tcgtcggcca ccgcgacctg ccgtcggcgc tgtcgggatg
     3301 cgcgcggcgg cgcgacatcg acgcggtcat cgccggcggc ggcgacggca cca
//
LOCUS       DATIKR010000096         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_182750, whole genome shotgun sequence.
ACCESSION   DATIKR010000096 DATIKR010000000
VERSION     DATIKR010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182750"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VLL76_01500"
     CDS             complement(<1..306)
                     /locus_tag="VLL76_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HSV28192.1"
                     /translation="MDHIPLKRPHFFFTTAPLPCPYIAGRLERKIVTELNGPDAEVLH
                     EALSRAGFRRSHSIAYTPACPGCNACVPVRIVADGFQPDRTMRKIWRANLDLQARKVP
                     "
     gene            complement(411..920)
                     /locus_tag="VLL76_01505"
     CDS             complement(411..920)
                     /locus_tag="VLL76_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HSV28193.1"
                     /translation="MAQSRVIDITPLPAWADPWAHPEYFRSITMKRIFAYLIDFTLVG
                     LIAIAVWFAFGILGLATFGLLLPLQALAVALVPLAYHILLIAGSATLGMRAMGIRVMS
                     IAPTADGGRPTLFQAMIQTVAFYGSIAMTTFLILAVALFNPRRRMLHDWMAGTVVVND
                     LGRWHSPIG"
     gene            complement(967..1941)
                     /locus_tag="VLL76_01510"
     CDS             complement(967..1941)
                     /locus_tag="VLL76_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HSV28194.1"
                     /translation="MAEGQQIIIKRVKKVAGGHHGGAWKVAYADFVTAMMAFFLLLWL
                     LNAVTEEQLTGISNYFAPSMASKSESGAGAILQGAAIGVPGVGTTNQAAPALIQHLPP
                     PSIGPGGEDLTSANTEPMEGMSEEDFKEKMAEREQKKFDKAKDMLEQAVKGIPELQQF
                     QGSMLVDNTQEGLRIQLTDQEGLAMFPSGSSAMYGHTRALLDLVARIVNQLPNKVAIS
                     GHTDAIPFRDPSGYTNWELSADRALASRRALLASGVPEDRVDRVVGKAATEPLVTDDP
                     KAPRNRRISIIMLREQDAVPPPEVAPNDAAKAPASTPAPAKAAPKAAN"
     gene            complement(1958..2818)
                     /gene="motA"
                     /locus_tag="VLL76_01515"
     CDS             complement(1958..2818)
                     /gene="motA"
                     /locus_tag="VLL76_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HSV28195.1"
                     /translation="MFAIIGIVVTIVSVIGGYAAGGGHLGVLWQPFEFVIIIGAAFGS
                     MLLGNPKSTIMGVFKNLGTVFKGPHYRKDAYIELLSMLYAVFKLAKTKGDLALESHVE
                     KPDDSPLFAKFPGFNGDHHVRTFLCDYLRLLTLGTSNAHELESIIDGELEAHHREYHE
                     MSHAVVLMADAMPALGIVAAVLGVIHTMGSITEPPEVLGHLIGAALVGTFSGVLLSYA
                     FFAPVGRNLQMAFDSDHYYFMAMKAGLLAHMQGYAPQVSIEFARKILPDELRPTFQEL
                     EETVTNLPPD"
BASE COUNT          510 a          939 c         1057 g          561 t
ORIGIN      
        1 cggcaccttg cgtgcctgca ggtccaaatt ggcgcgccag atcttgcgca tggtgcggtc
       61 gggctggaag ccgtcggcga cgatgcggac ggggacgcag gcgttgcagc cgggacaggc
      121 gggggtatag gcgatggaat ggctgcggcg gaagccggcg cgggacagcg cctcgtgcag
      181 cacttcggcg tcggggccgt tgagttcggt gacgatcttg cgctcgagcc ggccggcgat
      241 atacgggcac ggcagcggcg ccgtggtgaa gaagaagtgc ggccgtttga gggggatgtg
      301 atccattcgt gtcccagctt gtctcggcgt cccggtccct tgatatggga ggcgccgttt
      361 cctgccacca ccggtcccgg acgggggatg ctccgcctct cccgtccggc ttagccgatc
      421 ggggaatgcc accgtccgag gtcgttcacc accaccgttc cggccatcca gtcgtgcagc
      481 atgcgccggc gcggattgaa cagcgcgacc gccaggatca aaaaggtggt catggcgatc
      541 gacccataga acgcgacggt ttggatcatg gcctggaaca gggtcggccg tccaccatcg
      601 gctgtggggg cgatgctcat gactcttatg cccatggcgc gcatgcccag cgtcgccgag
      661 cctgcgatca gcaggatgtg gtaggccagc ggcaccagcg ccaccgccag cgcctgcagc
      721 ggcagcaaca gcccgaaggt cgccaggccc aggatgccga acgcgaacca caccgcgatg
      781 gcgatcagcc cgaccagggt gaagtcgatc agataggcga agatccgctt catggtgatc
      841 gagcggaaat actcgggatg cgcccacggg tcggcccagg cgggcagggg ggtgatgtcg
      901 atgacgcggg actgggccat ggtgaatctc tcctttcggc ccatgtaggt cgggcgctcg
      961 gggattctag ttggcggcct tcggcgccgc cttggcgggc gcgggggtgg acgcgggagc
     1021 cttggcggcg tcgttgggcg cgacctcggg cggcggcacg gcgtcttgtt cgcgcagcat
     1081 gatgatgctg atgcggcggt tgcgcggcgc cttggggtcg tcggtgacca gcggctcggt
     1141 ggcggccttg ccgacgacgc ggtcgactcg gtcctcgggc acgcccgacg ccaacagcgc
     1201 ccggcggctg gccagggcgc ggtcggccga cagctcccag ttggtgtagc cggatgggtc
     1261 gcggaacggg atggcgtcgg tgtggcccga gatcgccacc ttgttgggca attggttgac
     1321 gatgcgggcg accaggtcca gcagcgcccg ggtgtggccg tacatggccg agctgcccga
     1381 ggggaacatg gccaagccct cctggtcggt cagctggatg cgcaggcctt cctgggtgtt
     1441 gtccaccagc atcgagccct ggaactgctg cagctcggga atgcccttga ccgcctgttc
     1501 cagcatgtcc ttggccttgt cgaacttctt ctgttcgcgt tcggccatct tctccttgaa
     1561 gtcctcctcg ctcatgcctt ccatcggctc ggtgttggcc gaggtcaggt cctcgccgcc
     1621 cggcccgatg gagggcggcg gcaggtgctg gatgagcgcg ggggcggcct ggttggtggt
     1681 gccgacgccg ggcacgccga tggcggcgcc ctgcaggatg gcgcctgcgc cggattcgct
     1741 tttcgacgcc atggacggcg cgaagtagtt ggagatgccg gtcagctgtt cttccgtcac
     1801 cgcgttcagc agccacagca gcaggaagaa cgccatcatg gcggtcacga agtcggcata
     1861 ggccaccttc caggcgccac cgtggtggcc gccggcaacc ttcttgaccc gcttgatgat
     1921 gatctgctgg ccttcggcca tggctatcta agccccatca atccggcggc aggttggtga
     1981 cggtctcctc cagctcctgg aaggtcgggc ggagttcgtc gggaaggatc ttgcgggcga
     2041 attcgatcga cacctgcggc gcgtagccct gcatgtgggc aagcaggccg gctttcatcg
     2101 ccatgaagta ataatggtcg gaatcgaacg ccatctgcag gttccggccc acgggggcga
     2161 agaacgcata ggacagcagc acgcccgaga aggtgccgac cagcgccgcg ccgatcaggt
     2221 ggccaagcac ctcgggcggc tcggtgatcg aacccatggt gtggatgacg cccagcaccg
     2281 cggccacgat gcccagcgcg ggcatggcgt cggccatcag caccacggcg tgcgacatct
     2341 cgtggtattc gcggtgatgc gcctcgagtt cgccgtcgat gatggattcc agctcgtgcg
     2401 cgttggacgt gcccaaagtc agcaggcgca gatagtcgca caggaaggtg cggacgtggt
     2461 ggtcgccgtt gaagccgggg aacttggcga acagggggct gtcgtcgggc ttttccacgt
     2521 ggctttccag cgccaggtcg cccttggtct tggccagctt gaacaccgca tagagcatcg
     2581 acagcagctc gatgtaggcg tcctttcggt aatgcggccc cttgaagacg gtcccgaggt
     2641 tcttgaagac gcccatgatg gtcgacttcg ggttgcctag gagcatcgat ccgaaggccg
     2701 caccgataat gatcacgaat tcgaaaggct gccacagaac gccaagatgg ccgccgcccg
     2761 ccgcgtatcc gccgatgacg gaaacgatgg tgacgacgat accgatgatc gcgaacattc
     2821 acttcccctg attgcggccc gttcgtgcga ccaaaagccg atcgatccag acaatgctat
     2881 aattcgcgcc ggctgtcgcg agtcaactgc gttatcgcac gaaaaaagtt ggcatttggt
     2941 gtgcgttgct cggttcttcg cagggggcat ttgaccttgc cctggaaacc ttattaatct
     3001 cttcccacct cttcactgcc cgagcacaaa tccagatgtc cgtcgatcag cgctccttcc
     3061 gcaaggc
//
LOCUS       DATIKR010000097         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86183, whole genome shotgun sequence.
ACCESSION   DATIKR010000097 DATIKR010000000
VERSION     DATIKR010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86183"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            272..1564
                     /locus_tag="VLL76_01520"
     CDS             272..1564
                     /locus_tag="VLL76_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSV28196.1"
                     /translation="MTVNSKHPETIVLHAGYRADPTTGSVAVPIHQTTSYQFRDTEHA
                     ANLFALSELGNIYTRIMNPTQDVLEQRIAALEGGVAALATSSGQAASTFAVMNLCQAG
                     DNFVSSTDLYGGTWNLFANTLKQFGIECRFVDPADPEAFVKATDERTRCWYAETLPNP
                     KLEVFPIAEVAKLAEATGVPLIMDNTAAPVLCRPLDHGAHIVVYSTTKFIGGHGTSIG
                     GMIVDSGKFDWEKHAARFPLLTQPDPSYHGAVWTEAVKPLGPIAYIIRARVILQRDIG
                     AAMSPFNAFQFIQGMETLPLRMRVHCDNAAAVAHYLSKHPKVERVIYPGVMKGEARRR
                     ADAVMKHGYGSLLGFELKGGAEAGKRFINALEMFYHVANIGDARSLAIHPASTTHSQL
                     SAEDQLSTGVTPGYVRLSVGLEHIEDITADLAQALEKA"
BASE COUNT          285 a          546 c          472 g          270 t
ORIGIN      
        1 agcaaaacgg cagcgatctc atcgaattgt gagggcgaca gcgcgttcaa cacctgcggg
       61 cgattgagcg tgatgtggcc cacggagcct tgggtggcaa tcagcgtatc ggtcatcggc
      121 atcctctgtc gggcgggcaa gtatccgccg gccaattcaa catatcaaca atggataatg
      181 ttcgggggct ttcttgacag cggtcgttgg ccggtgttca actcgccgtt ctcttatcga
      241 gcaggtagtt tccgttgcaa ggagttgggg tatgacggtg aacagcaagc atcccgagac
      301 catcgttctg cacgccggtt atcgggccga tccgaccacc ggttcggtgg cggtgcccat
      361 ccaccagacg acctcgtacc agttccgcga caccgagcac gccgccaatt tgttcgccct
      421 atccgagctg ggcaacatct acacccgcat catgaacccg acccaggacg tgctggagca
      481 gcgcatcgcc gcgctggaag gcggcgtcgc ggcgctggcg acctcgtcgg gccaggcggc
      541 cagcaccttc gcggtgatga acctgtgcca ggccggcgac aacttcgtca gctcgaccga
      601 cctttacggc ggcacctgga acctgttcgc caacacgctg aagcagttcg gcatcgaatg
      661 ccgcttcgtc gatcccgcgg accccgaggc cttcgtaaag gccaccgacg agcgcacccg
      721 ctgctggtac gccgaaaccc tgcccaatcc caagctggaa gtgttcccca tcgccgaggt
      781 cgccaagctg gccgaggcca ccggcgtgcc gctgatcatg gacaacaccg ccgccccggt
      841 gctgtgccgc ccgctcgacc acggcgccca catcgtcgtc tattcgacca ccaagttcat
      901 cggcggccat ggcacctcga tcggcggcat gatcgtcgat tccggcaagt tcgactggga
      961 gaagcacgca gcccgcttcc cgctgctgac ccagcccgat cccagctatc acggcgccgt
     1021 gtggaccgag gcggtcaagc cgctgggccc catcgcctac atcatccgcg cccgcgtcat
     1081 cctgcagcgc gacatcggcg cggccatgag cccgttcaat gccttccagt tcatccaggg
     1141 catggagacg ctgccgctgc gcatgcgtgt ccattgcgac aacgccgccg ccgtggcgca
     1201 ttacctgtcg aagcacccca aggtcgagcg ggtgatctat cccggcgtga tgaagggcga
     1261 ggcccgccgc cgcgccgacg cggtgatgaa gcacggctac ggctcgctgc tgggcttcga
     1321 gctgaagggc ggcgccgagg ccggcaagcg cttcatcaac gccctcgaga tgttctacca
     1381 cgtcgccaat atcggcgacg cccgctcgct ggccatccat cccgccagca ccacccattc
     1441 gcagttgtcg gccgaggacc agctgtccac tggcgtcacg ccgggctatg tgcgattgtc
     1501 cgtgggcctc gagcacatcg aagacatcac cgccgacctg gcgcaagctt tggagaaggc
     1561 ctgaccgtgc cca
//
LOCUS       DATIKR010000098         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195069, whole genome shotgun sequence.
ACCESSION   DATIKR010000098 DATIKR010000000
VERSION     DATIKR010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195069"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..76
                     /locus_tag="VLL76_01525"
     CDS             <1..76
                     /locus_tag="VLL76_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HSV28197.1"
                     /translation="GTEVKIDGQELLIMKESDILGILA"
     gene            112..>1664
                     /gene="groL"
                     /locus_tag="VLL76_01530"
     CDS             112..>1664
                     /gene="groL"
                     /locus_tag="VLL76_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382650.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HSV28198.1"
                     /translation="MAAKEVKFSTDARTKMLRGVDILADAVKVTLGPKGRNVVIEKSF
                     GAPRITKDGVSVAKEIELADKFENMGAQMVREVASKTADLAGDGTTTATVLAQAIVRE
                     GVKAVAAGLNPMDLKRGVDMAVAAVIADVKGRSRKVSTNEEIAQVGTISANGEREIGD
                     MIAKAMEKVGNEGVITVEEAKGIDTELDVVEGMQFDRGYSSPYFVTNAEKMTVELDSP
                     YILLFEKKLSGLQPLLPVLESVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLESVTLDMLGTAKRVTITKEDTTIVD
                     GAGAKGDIEARCKQIRAQVEETTSDYDREKLQERLAKLAGGVAVIKVGGASEVEVKER
                     KDRVDDALHATRAAVEEGIVSGGGVALLYSVKALEALKPANNDQKVGIEIIRRALQAP
                     VRQIAENAGFDGAVVAGKLLESSDANFGFDAQSGEYTDMIKAGIIDPTKVVRTALQDA
                     ASVAGLLITT"
BASE COUNT          326 a          547 c          553 g          238 t
ORIGIN      
        1 gggcaccgag gtcaagatcg acggccagga gctgttgatc atgaaggagt cggacatcct
       61 gggcatcctc gcctaagcgt ctccgcacag aaattttgag ggattacgaa aatggctgct
      121 aaggaagtca agttctccac cgacgcgcgc accaagatgc tgcgcggcgt ggacatcctc
      181 gccgacgcgg tgaaggtgac cctgggcccc aagggccgca acgtggtgat cgagaagtcg
      241 ttcggcgctc cgcgcatcac caaggacggc gtgtcggtcg ccaaggaaat cgagctggcc
      301 gacaagttcg agaacatggg cgcccagatg gtgcgcgaag tggcctcgaa gaccgccgac
      361 ctggccggtg acggcaccac caccgccacc gtgctggccc aggccatcgt ccgcgagggc
      421 gtcaaggccg tggccgccgg cctgaacccg atggacctca agcgcggcgt cgacatggcc
      481 gtcgccgccg tcatcgccga cgtcaagggc cgttcgcgca aggtctcgac caacgaagag
      541 atcgcccagg tcggcaccat ctcggccaat ggcgagcgcg agatcggcga catgatcgcc
      601 aaggccatgg aaaaggtcgg caacgagggt gtcatcaccg tcgaggaagc caagggcatc
      661 gacaccgagc tcgacgtcgt cgagggcatg cagttcgacc gcggctattc gtcgccgtac
      721 ttcgtgacca acgccgagaa gatgaccgtc gagctggaca gcccctacat cctgctgttc
      781 gaaaagaagc tgtcgggcct gcagccgctg ctgccggtgc tcgagtcggt ggtgcagtcg
      841 ggccgtccgc tgctgatcat cgccgaggac gtcgagggcg aggccctggc caccctggtc
      901 gtcaacaagc tgcgcggcgg cctgaaggtc gccgccgtca aggctccggg cttcggcgat
      961 cgccgcaagg ccatgctgga agacatcgcc atcctgaccg gtggccaggt catcagcgaa
     1021 gacctcggca tcaagctgga gtcggtcacc cttgacatgc tgggcaccgc caagcgcgtg
     1081 accatcacca aggaagacac caccatcgtc gacggcgccg gcgccaaggg cgacatcgag
     1141 gcccgctgca agcagatccg cgcgcaggtc gaggagacca cctcggacta cgaccgcgag
     1201 aagctgcagg agcgtctcgc caagctggcc ggcggcgttg ccgtcatcaa ggtcggcggc
     1261 gcctcggaag tcgaggtgaa ggagcgcaag gatcgtgtgg acgacgctct gcacgccacc
     1321 cgcgccgccg tcgaggaagg catcgtgtcg ggcggcggcg tcgccctgct gtactcggtc
     1381 aaggccctgg aagccctgaa gcccgccaac aacgaccaga aggtcggcat cgagatcatc
     1441 cgccgcgcgc tgcaggcgcc ggtgcgtcag atcgccgaga acgccggctt cgacggcgcc
     1501 gttgtcgccg gcaagctgct ggaatcgtcg gacgccaatt tcggcttcga cgcccagtcg
     1561 ggcgagtaca ccgacatgat caaggccggc atcatcgatc cgaccaaggt cgtgcgcacc
     1621 gccctgcagg acgccgcttc ggtggccggc ctgctgatca ccac
//
LOCUS       DATIKR010000099         2465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_231421, whole genome shotgun sequence.
ACCESSION   DATIKR010000099 DATIKR010000000
VERSION     DATIKR010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231421"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..545)
                     /locus_tag="VLL76_01535"
     CDS             complement(57..545)
                     /locus_tag="VLL76_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSV28199.1"
                     /translation="MRFAVLILAVLLPAQSWAADCTAPAEPKVDWQRCYMDGRNFVGH
                     DLSQARLREVSFQRADLSRANLTGADAYRARFVSATMVNARLDDGIFVEAEFTKTDLT
                     GASLKGADLRRAKFFRASLKGADLTGAKTLGADFLNADLSGARWTDGIRICAEGSVGQ
                     CD"
     gene            684..1568
                     /locus_tag="VLL76_01540"
     CDS             684..1568
                     /locus_tag="VLL76_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28200.1"
                     /translation="MGKTQADTTLEEAERLWLSGEIQRAREAYRRARLLFHENGDAAG
                     EATALTQLGDLEAETGHYPGAREAYADARKLFAQDGDQHDQAGLLVRLGQLAHREGKA
                     DEALQFFNSAREMYDSASDWAGLGHVTKRLGHLERDHGRQDRALELYGEALGHYRRAN
                     DTLGLANALRAMAIMHRQLSQFDVAHEELEQALDLYREAGDALGEAACNHSLGHLLQK
                     AGNAAEARRSLDAARHLYAAAGHLRGEAEVLLDLGRMVADDDAAKARSLFKHAADLAH
                     RVGAAGVVEQAEKELGRL"
     gene            complement(2305..2457)
                     /locus_tag="VLL76_01545"
     CDS             complement(2305..2457)
                     /locus_tag="VLL76_01545"
                     /inference="COORDINATES: protein motif:HMM:NF023273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3365 domain-containing protein"
                     /protein_id="HSV28201.1"
                     /translation="MPTGNVCLGCHGTEIQPEVGAKLTALYPADQARGYRLNDLRGAF
                     TLEKRL"
BASE COUNT          418 a          820 c          826 g          401 t
ORIGIN      
        1 aatgggcggc gacgtcgacc gggtcgctga atttcattgc cctgtcccca ccttcatcaa
       61 tcgcattgtc ccaccgaacc ctcggcacag atccggatgc cgtcggtcca gcgggcaccg
      121 gacagatcgg cgttcaagaa atcggctccc agggtcttgg ccccggtcag gtccgcgcct
      181 ttcagcgagg ccctgaagaa tttcgcccga cgcaggtcgg cgcccttgag cgaggcgccc
      241 gtcaggtcgg tcttggtgaa ctcggcctcg acgaaaatgc cgtcgtccag cctggcattc
      301 accatcgtcg cgctgacgaa gcgggcgcgg taggcgtcgg cccctgtcag gttggccctg
      361 gacaggtcgg cgcgctggaa gctcacctcg cgcagccggg cctgcgacag gtcgtggccg
      421 acgaaattcc tgccatccat gtagcagcgc tgccagtcga ccttgggttc ggccggagcg
      481 gtgcagtcgg cagcccagga ttgagccggc agcaggacgg ccagtatcag gacggcaaaa
      541 cgcatgtcct aggtttaccc ccggcccggc ccgataaaaa gagttatttc cggcatcgtt
      601 tccatccgca cgggaacggg tttaccggcg gccggtccgg gcttaccttt gtcgggaagc
      661 caattgaacg aatgggccgc accatgggca agacgcaagc cgacaccacc ctggaagaag
      721 ccgagcgcct gtggctgtca ggcgagatcc agcgggcgcg cgaggcctat cgccgcgccc
      781 gcctgctgtt tcacgagaat ggcgacgctg ccggcgaggc caccgcgctg acccaattgg
      841 gcgaccttga ggccgagacc ggccattatc ccggcgcccg cgaggcctat gccgacgccc
      901 gcaagctgtt cgcccaggac ggcgaccagc acgaccaggc cgggctgctg gtgcggctgg
      961 gccagcttgc ccatcgcgag ggcaaggcgg acgaggccct gcaattcttc aactcggcgc
     1021 gcgagatgta cgacagcgcc tcggactggg ccgggctggg ccatgtgacc aagcggctgg
     1081 ggcatctgga acgcgaccac ggccgccagg accgcgcgct ggaactctat ggcgaggcac
     1141 tgggccatta ccgccgcgcc aacgacacct tggggctggc caacgcgctg cgcgccatgg
     1201 cgatcatgca ccgccaactc agccagttcg acgtcgccca cgaagaattg gagcaggcgc
     1261 tggaccttta tcgcgaggcc ggcgacgccc tgggcgaggc cgcctgcaac cactcgctgg
     1321 ggcatctgct gcagaaggcc ggcaacgccg ccgaggcccg ccgctcgctg gacgccgccc
     1381 gccacctcta tgccgccgcc ggccatctgc gcggcgaggc cgaggtgttg ctggacctcg
     1441 gccgcatggt cgccgacgac gacgcggcca aggcccgttc gctgttcaag catgccgccg
     1501 acctcgccca tcgggtgggc gcggccggcg tggtcgagca ggcggaaaag gaactggggc
     1561 ggttgtagcg ccgctgcgga aaaacccggg tttgacgttt ccaagcccct ggccgtcatg
     1621 cccggacttg atccactgct gtccggtcaa aatttccgta gaggcgccga cgtgcccggc
     1681 ccgccttcgc ttgacggcct gcgcagggtc aaggaacacg gaaaagggga tgccggctgc
     1741 gccggcatgg gatgaaggcg atagagcgat cgcggaacct acgcgtcgat gcctcccctc
     1801 cgtcccgttg gccgctatgc ggccatcccc ttcatccccg tcttctttcc gggtgcctgc
     1861 cgctcaggct ttgcaacatc gtcatggccg ggcgtgaccc acggctgtcc ggttcaggtt
     1921 ttggtcagtg ccgtgcaagg gcagggttcg cgccattctc agccggtttg atttttgcgg
     1981 gacaggtttg gcccatccgt cccctcaccg tcatccccgc gaaggcgggg atccatggag
     2041 gccgcgaaaa atatcgggag gacaatggct tgaggcgaag ccggacggcc ccatggaccc
     2101 ccgccttcgc gggggtgacg agtctggggg ccgagggtcg aagctaaacc ggacagaaat
     2161 ggacgtgatc cggccatcca cgcggatccg cctaaggtgc tgatattaaa gcggaactgg
     2221 cggctgccac gtggatggcc gggtcaagcc cggccatgac ggcagaggta caatgcgccg
     2281 tttgatgagt attgccgcag cctgctaaag ccgcttttcc agcgtgaacg cgccgcgcaa
     2341 gtcgttgagg cggtagccgc gcgcctggtc ggccgggtac agcgccgtca gcttggcgcc
     2401 gacctcgggc tggatctcgg tgccgtggca gcccaggcag acgttgccgg tcggaatcgc
     2461 cttca
//
LOCUS       DATIKR010000100         2886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195106, whole genome shotgun sequence.
ACCESSION   DATIKR010000100 DATIKR010000000
VERSION     DATIKR010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195106"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1087)
                     /locus_tag="VLL76_01550"
     CDS             complement(<1..1087)
                     /locus_tag="VLL76_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008447722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSV28202.1"
                     /translation="MTEVKPRRAIARDPRITPDFLLSVANRLAASRTLIDALDALVHI
                     TTEAVGAERGSIFLNDPATGELYSRVHDGRFTREIRIFNTTGVAGHVFTTGKPAIIDD
                     AYADKHFNSAVDTQTGYTTRTILCAPLVTLKGERIGVAQLLNKRRQATFTKADLAVLQ
                     AIVEQAGIALESLRTVENVERQRAQELEFLGVVSDISSELKLGPLLQKIIGTITHMLD
                     AERSTLFINDERTNELFTMVGEGLGATQIRLPNHLGIAGAVFQSRETINIPHAYADLR
                     FNPGFDRKTGFFTRSILCVPVLNKDGKCIGVTQVLNKRGGSFTADDEARLKAFVSQIS
                     IGLENAKLFDDVQNIKNYNESILESMTN"
     gene            complement(1080..1412)
                     /locus_tag="VLL76_01555"
     CDS             complement(1080..1412)
                     /locus_tag="VLL76_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28203.1"
                     /translation="MAKLAAPPSPAADPQLEIAELRRAIDAMREQLDLQRLGEAERVQ
                     AAINSRDDEIRQLKAMVQAVRDQLDLAQASHREAMDAAERRRQSEVDELHRAITALRD
                     ALEEARHD"
     gene            complement(1496..1837)
                     /locus_tag="VLL76_01560"
     CDS             complement(1496..1837)
                     /locus_tag="VLL76_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28204.1"
                     /translation="MITVYYKSGSAQWKYELDESEHDYIIKNVLEDKPDVEEMFDDSL
                     EILRDVSAMSEDEMDEDDQIDQTIAVSYLWHYFNHLSPGEDRIEGDIVVIEDEDGTGV
                     TVLPAAGLAEE"
     gene            2010..2870
                     /gene="purU"
                     /locus_tag="VLL76_01565"
     CDS             2010..2870
                     /gene="purU"
                     /locus_tag="VLL76_01565"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008864 - formyltetrahydrofolate
                     deformylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HSV28205.1"
                     /translation="MADKQNYVLTITCPDTVGIVAAVSGFLTQHDCFITEAAQYGDPL
                     SRRFFMRIVFAAGALTPGKDEFHKLFSLVAEKFQMIWNLHDLSRKPRVVIMVSKFGHC
                     LVDLLHRYHTGQLNIDIPAVISNHPDMRSIVEWHGIPYHFLAVDKHDKADQEARVMEV
                     IDRSKADLVVLARYMQILSTDMCNSLAGRAINIHHSFLPSFKGAKPYHQAHSRGVKII
                     GATAHYVTADLDEGPIIEQSVERVDHTHTPDDLVAIGRDIENLVLARAVRWHCEYRVL
                     LNGSKTVVFR"
BASE COUNT          470 a          915 c          949 g          552 t
ORIGIN      
        1 cgttggtcat gctttccagg atggattcgt tgtagttctt gatgttctgg acgtcgtcga
       61 acagcttggc gttctccagc ccgatggaga tctggctgac gaaggccttg agccgcgcct
      121 cgtcgtcggc ggtgaagctg ccgccgcgct tgttcagcac ctgggtgacg ccgatgcact
      181 tgccgtcctt gttgagcacc ggcacgcaca ggatcgagcg cgtgaaaaag ccggtcttgc
      241 ggtcgaagcc gggattgaag cgcaggtcgg cgtaggcatg ggggatgttg atcgtctcgc
      301 gcgactggaa cacggcgccg gcgatgccga gatggttggg caggcggatc tgcgtcgccc
      361 ccaggccctc gcccaccatg gtgaacagct cgttggtgcg ttcgtcgttg atgaacaagg
      421 tcgagcgctc ggcgtccagc atgtgggtga tggtgccgat gatcttctgc agcagcggcc
      481 ccagcttgag ttccgagctg atgtcggaca ccacgcccag gaattccagc tcctgggccc
      541 gctggcgctc gacattctcg accgtgcgca gggattccag ggcgatcccg gcctgctcga
      601 cgatggcctg cagcaccgcc aggtcggcct tggtgaaggt ggcttggcgg cgcttgttga
      661 gcaattgggc gacgccgata cgctcgccct tcagggtcac cagcggcgcg cacaggatgg
      721 tgcgggtggt gtagccggtc tgggtgtcca ccgcgctgtt gaaatgcttg tcggcatagg
      781 cgtcgtcgat gatggccggc ttgccggtgg tgaagacgtg gccggcgacg ccggtggtgt
      841 tgaagatgcg gatctcgcgg gtgaaacggc cgtcatggac gcgggaatac agctcgccgg
      901 tggcgggatc gttgaggaag atcgatccgc gttccgcccc caccgcctcg gtggtgatgt
      961 ggaccagggc gtccagcgcg tcgatcaggg tgcgcgaggc cgccagccgg ttggccaccg
     1021 acagcaggaa gtcgggggtg atgcgggggt cgcgggcgat ggcgcggcgg ggcttcacct
     1081 cagtcatggc gggcctcctc cagcgcatca cgcagcgccg tgatggcccg gtgcagctcg
     1141 tccacctcgc tctggcggcg gcgttccgcc gcgtccatgg cttcgcgatg gctggcttgg
     1201 gccaggtcga gctgatcgcg cacggcctgg accatggcct tcaactggcg gatctcgtcg
     1261 tcgcgggaat tgatcgcggc ctggacgcgt tcggcctcgc ccaggcgctg caggtcgagc
     1321 tgctcgcgca tggcgtcgat ggcgcgccgc agctcggcta tttcaagctg ggggtcggcg
     1381 gcaggggaag gaggggccgc aagcttggcc atgacacgcc ccatcacggg atgtccacgg
     1441 caccagttta ctccttcccc gcacgatcag gaagcatatg cctcccgacc gggttctact
     1501 cctcggcgag gccggcggcc ggcagcacgg tcacgccggt gccgtcctca tcctcgatca
     1561 ccacgatgtc gccttcgatg cgatcctcgc ccggcgacag gtggttgaag tagtgccaga
     1621 gataggagac cgcgatggtc tggtcgatct ggtcgtcctc gtccatctcg tcttcggaca
     1681 tggccgacac gtcgcgcagg atttccaggc tgtcgtcgaa catctcttcg acgtctggct
     1741 tgtcctccag cacgttcttg atgatgtagt cgtgctcgga ctcgtccagt tcatacttcc
     1801 actgggcgct gccggatttg taatagacgg tgatcatcaa ggagcctcct ggcgcgcgaa
     1861 tggccgaatt tgaaggcgga ccagagcggt cccgggcgtg gtttcggacc ttccccgaat
     1921 tccagaaaaa aggcaagggc acgtttgccg gcttggctcg ggcgcgcggg tcggctatct
     1981 agctttgcgt gcggatcata gaggacgcca tggccgacaa gcagaattac gtgctgacca
     2041 tcacctgccc cgacaccgtc ggcatcgtcg ccgccgtctc gggtttcctg acccagcacg
     2101 attgcttcat caccgaggcc gcccagtacg gcgatccgct gtcgcgccgc ttcttcatgc
     2161 gcatcgtgtt cgccgccggc gccctgacgc ccggcaagga cgagttccac aagctgttct
     2221 cgctggtggc cgagaagttc cagatgatct ggaacctgca cgacctcagc cgcaagccgc
     2281 gcgtggtgat catggtctcc aagttcggcc attgcctggt ggacctgctg caccgctacc
     2341 ataccggcca gttgaacatc gacatcccgg cggtaatctc gaaccacccc gacatgcgct
     2401 cgatcgtcga atggcacggc atcccctatc atttcctggc ggtggacaag cacgacaagg
     2461 ccgaccagga agcccgggtg atggaggtca tcgaccgctc gaaggccgat ctggtggtgc
     2521 tggcgcgcta catgcagatc ctgtcgaccg acatgtgcaa cagcctggcc ggccgcgcca
     2581 tcaacatcca ccactcgttc ctgcccagct tcaagggcgc caagccgtat caccaggccc
     2641 attcgcgcgg cgtcaagatc atcggcgcca ccgcccatta cgtgaccgcc gacctggacg
     2701 aaggcccgat catcgaacag tcggtcgagc gcgtggacca cacccacacc cccgacgacc
     2761 tggtcgccat cggccgcgac atcgagaacc tggtactggc ccgcgccgtg cgctggcatt
     2821 gcgaataccg cgtgctgctg aacggctcga agacggtggt tttccgctag gccggcctgc
     2881 taagat
//
LOCUS       DATIKR010000101         1682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_62254, whole genome shotgun sequence.
ACCESSION   DATIKR010000101 DATIKR010000000
VERSION     DATIKR010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62254"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..442)
                     /locus_tag="VLL76_01570"
     CDS             complement(65..442)
                     /locus_tag="VLL76_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28206.1"
                     /translation="MASISNYTVNVMRGVPAEPQTALETVERPGANGSELLALGKREM
                     PTEIYTLTADTKANALAMKINHEKLRGTVVALIDAFGTTHSAVAVEAVRATVRPAAIV
                     AGNATATHVVESVFTVRKRVTSP"
     gene            complement(442..>1682)
                     /locus_tag="VLL76_01575"
     CDS             complement(442..>1682)
                     /locus_tag="VLL76_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28207.1"
                     /translation="GDLSGEQFASAFQETARVGGMTGQGVDLPALGGGIQDVMRVTGA
                     RDPRAAAGWIRQIGQQARIVDLDKQVRAIVPAISGAKEFGATPEQAAELMAYLTMRSG
                     DVEGRKSSTGAVNFMQMLQEATTEAGAILPTGRSTKHGKLFGGGGNAAKFRKLKGGTF
                     EERLAEVQDWYASASQPLRNEFIGKLQGEAKVKGALISLIGRDPGALSAMGQIRREVG
                     SPGSPNVHGAWESFFTAAAGGAQEPARAADKALESDTEQNLLGLGPEGRRAAISARLE
                     ANLRSRGVGPVEANQIQTRFAIQSKFGSPEKAIENAIISANAAAARVTPAGGILGDSL
                     PALDILLPPLGALNQGTMGYAQAKAWFTGPSEKDAALIAEFRKLLIVAEKQAHETAGL
                     RSDLRAAPAVPNPNVHTEGR"
BASE COUNT          214 a          539 c          599 g          330 t
ORIGIN      
        1 cttttacttc tacgtcctct gtgcctctgt ggtcgatgtc tcttcccgcc gccggcgggg
       61 ccggtcatgg gctcgtcact cgttttcgaa ccgtgaagac ggactccacc acgtgcgtgg
      121 cggttgcgtt gcccgcgacg atggccgcgg ggcgaaccgt tgcccgcacc gcctcgacgg
      181 cgacggcgga gtgcgtggtg ccgaacgcat cgatcagggc gaccacggtt ccgcggagtt
      241 tctcgtggtt gattttcatc gcgagggcat tcgccttggt gtcggcggtg agcgtgtaaa
      301 tctccgtggg catttcccgt ttgcccaggg cgagcagttc cgagccattg gcgccgggcc
      361 gctcgacggt ctccagggcg gtttgcggct cggcgggcac gcctcgcatc acgttcacgg
      421 tgtaattgct gatcgacgcc atcagcgacc ctccgtgtgg acgttggggt tgggcacggc
      481 gggggcggcc cgcaggtccg accgcagacc ggcagtctcg tgtgcctgtt tctctgcgac
      541 tatgagcagt ttgcggaact ccgcgatgag cgccgcgtcc ttctcgctgg ggccggtgaa
      601 ccaggccttt gcctgggcgt accccatcgt tccctggttg agggccccta gcggcgggag
      661 gagaatatcg agggcgggca gggaatcgcc caggatgccg ccggcgggcg tgacgcgagc
      721 ggccgccgcg ttggcggaaa taatcgcgtt ttcgatggct ttctcgggcg agccgaattt
      781 cgactgaatc gcgaaccgcg tctggatttg gttggcctcg acgggcccga cgcctctgga
      841 tcgcaggttc gcctccaggc gggcggatat ggcggcccgc cgcccctcgg ggccaagccc
      901 gagaagattt tgttctgtgt ccgactcgag ggccttgtcg gcggcgcggg cgggttcctg
      961 cgcgccgccg gcggcggcgg tgaaaaaact ctcccaggcc ccgtgcacgt tgggagaacc
     1021 gggcgagccc acttcgcggc gaatttgccc catggcgctc agggcgcctg ggtcgcggcc
     1081 gatgaggcta atcagggcgc cctttacctt cgcctcgcct tgcagtttgc caatgaattc
     1141 gttgcgcagc ggctggctgg cggaggcgta ccaatcctgg acctcggcca gtctttcttc
     1201 gaacgttccg cccttgagtt tgcggaactt ggcggcgttg ccgcccccgc caaagagttt
     1261 gccgtgtttg gtcgagcggc ccgtggggag gatcgcgccg gcctcggtcg tggcctcctg
     1321 gagcatctgc atgaagttca ccgcgccggt ggagcttttg cgaccctcca cgtcgccgga
     1381 gcgcatggtg aggtaggcca tcagttcggc ggcctgttcg ggcgtggccc cgaattcctt
     1441 cgcgccgctg atggcgggga cgatggcgcg gacctgttta tccaggtcga cgatgcgggc
     1501 ctgttggccg atctggcgga tccagccggc ggcggcgcgg gggtcgcgtg ccccggtgac
     1561 gcgcatgacg tcctgaatgc cgccgcccag ggcgggcagg tccacgccct ggcccgtcat
     1621 gccgcccacg cgggcggtct cctggaaggc ggaggcgaac tgctcgcccg acaggtcgcc
     1681 ca
//
LOCUS       DATIKR010000102         1844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_122608, whole genome shotgun sequence.
ACCESSION   DATIKR010000102 DATIKR010000000
VERSION     DATIKR010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122608"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1319
                     /gene="leuC"
                     /locus_tag="VLL76_01580"
     CDS             <1..1319
                     /gene="leuC"
                     /locus_tag="VLL76_01580"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HSV28208.1"
                     /translation="RHLVHEVTSPQAFEGLRMAGRKVRHPEMTLAVADHNVPTTDRSK
                     GIENEESRVQVETLEQNARDFGVEYFRMDDVRQGVVHIVGPEQGFTLPGTTIVCGDSH
                     TATHGAFGALAFGIGTSEVEHVLATQTLVQKPAKNMRITVNGKIPPGVTAKDIVLAIC
                     GKIGTAGGTGYVVEYTGEAIKSLSMEGRMTVCNMTIEAGARAGLIAPDEVTFEYIKGK
                     PRAPKGAAFEAALSYWKTLFTDADAKFDAEVVLNAEDLVPQVTWGTSPEDVIPITGTV
                     PVPSQIADENKRRAVERSIEYMGLEAGMKATDIKVDVVFIGSCTNGRIEDFRAAAEVL
                     KGRKVAAGVQALIVPGSGLVKEQAEAEGLDKIFIEAGAEWREPGCSMCLAMNADQLKP
                     GQRSASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGKLTDVRDLK"
     gene            1548..>1844
                     /gene="leuD"
                     /locus_tag="VLL76_01585"
     CDS             1548..>1844
                     /gene="leuD"
                     /locus_tag="VLL76_01585"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009561653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HSV28209.1"
                     /translation="MEKFTVLTGVAAPLPMINVDTDMIIPKQFLKTIKRSGLGKNLFD
                     EMRYTPDGKEVPGFVLNQAAYRNAKILVAGNNFGCGSSREHAPWAIADFGIRCVI"
BASE COUNT          349 a          647 c          588 g          260 t
ORIGIN      
        1 accgccacct cgtgcacgag gtgaccagcc cgcaggcctt cgagggcctt cgcatggccg
       61 ggcgcaaggt ccgccacccc gagatgactc tcgcggtcgc cgaccacaac gtgccgacca
      121 ccgaccggtc gaagggcatc gagaacgagg aaagccgcgt ccaggtcgag accctggaac
      181 agaacgcgcg tgatttcggc gtcgagtact tccgcatgga cgacgtccgc cagggcgtgg
      241 tccacatcgt cggccccgag cagggcttca ccctgcccgg caccaccatc gtctgcggcg
      301 attcgcacac cgccacccac ggtgccttcg gcgccctggc cttcggcatc ggcacctccg
      361 aggtcgagca tgtgctggcg acccagaccc tggtgcagaa gccggccaag aacatgcgga
      421 tcaccgtcaa cggcaagatc ccgccgggcg tgaccgccaa ggacatcgtg ctggccatct
      481 gcggcaagat cggcaccgcc ggcggcaccg gctatgtggt cgagtacacc ggcgaggcca
      541 tcaagagcct gtcgatggaa ggccgcatga cggtctgcaa catgaccatc gaggcgggcg
      601 cccgcgccgg cctgatcgcc cccgacgagg tcaccttcga gtacatcaag ggcaagccgc
      661 gcgcccccaa gggcgccgcc ttcgaggccg ccctgtcgta ctggaagacc ctgttcaccg
      721 acgccgacgc caagttcgac gccgaagtgg tgctgaacgc cgaggacctg gtgccgcagg
      781 tgacctgggg caccagcccc gaggacgtca tcccgatcac cggcaccgtg ccggtgccgt
      841 cgcagatcgc cgacgagaac aagcgccgcg ccgtcgagcg ctcgatcgag tacatgggcc
      901 tcgaagccgg catgaaggcc accgacatca aggtcgacgt ggtgttcatc gggtcctgca
      961 ccaacggccg catcgaggac ttccgcgccg ccgccgaagt gctgaagggc cgcaaggtcg
     1021 ccgccggcgt ccaggcgctg atcgtccccg gctcgggcct ggtcaaggaa caggcggaag
     1081 ccgaaggcct ggacaagatc ttcatcgagg ccggcgccga atggcgcgag cccggctgct
     1141 ccatgtgcct ggccatgaac gccgaccagc tcaagcccgg ccagcgctcg gcgtccacct
     1201 cgaaccgcaa cttcgagggc cgccagggcc gcggcggccg cacccacctg gtgtcgccgg
     1261 ccatggccgc cgccgccgcg gtgaccggca agctgaccga cgtgcgggat ttgaagtagg
     1321 atccttgccc gccggggtgg gggccaggtt catagaacaa cgaaccacgg agacacggag
     1381 gcacggagac cattccaaat gcccgtcatc accgggcttg acccggtgat ccatggaacc
     1441 gccgcaccgg cgtggatgtc cggatcaagt ccgggcatga cgaagacaaa ggaaactccg
     1501 tgcctccgtg tctccgtggt gacatcagcc tgttaggggc cagagccatg gaaaagttta
     1561 ccgttctcac cggcgtcgcg gcgccgctgc cgatgatcaa cgtcgacacc gacatgatca
     1621 tccccaagca gttcctgaag accatcaagc gttcgggtct gggcaagaac ctgttcgacg
     1681 agatgcgcta cactcccgac ggcaaggaag tccccggctt cgtgctgaac caggcggcgt
     1741 atcgcaacgc caagatcctg gtggccggca acaatttcgg ctgcggctcg tcgcgcgagc
     1801 atgccccctg ggccatcgcc gatttcggca tccgctgcgt catc
//
LOCUS       DATIKR010000103         7091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86313, whole genome shotgun sequence.
ACCESSION   DATIKR010000103 DATIKR010000000
VERSION     DATIKR010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 7091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7091
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86313"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2887)
                     /locus_tag="VLL76_01590"
     CDS             complement(<1..2887)
                     /locus_tag="VLL76_01590"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV28210.1"
                     /translation="MTLESVAEIKAADRVFYHAADGVTAAFIRSLNENCHDLYQYYGT
                     GKERNITYLQMAEVILAAVRNGESVCAVFYGHPAVFVKAVRRVVYQSRQEGHEAIVYP
                     GITTMDYLFADLEVDPSRNGCQIVDATDYYIRKRKLNTDSQVIMLQIGAFADSTFNFR
                     GYEKKNFRLLIEALMEDYGGDAPCTVYRGSSFPGIPSEKIALNLSDLLNPEIQRKHVT
                     GVSTLYIPPKTLSAAVKERVEASGYGKAGAVVAMGPTKWETANSAKTKKVADELPNHQ
                     LPEDYVERRASGTMLKLMEDMATDTRVLKNFLVDPRGTLKGYSQLSKEEQRALLSGSI
                     GRVSQVSKLGSTGTESFATTSSSSTDSSSVSANSFLNNLLETGNTAILYNTYYNGLAS
                     GGTAAAGDAAVQDYINSSGWSGVTTDQVYNAIQTVAGGTIDPGTGPDSDSSTSVALTS
                     SSTAGNTTYPPFGTAVSVAYGDYQTFTSDGQASLYVMLLSNNGALQVKVATPTIPLVD
                     ITASVGFNQTTGTFFVGASTAFPYNGTITLSSCFVTINGTQNTDFNMTANLTSTNGSP
                     AITSSGRRSVYSATAAAQPCGVDSPSYWGATYSCTLNSSSAQLVISSDGSTITFQGMT
                     APATFSPLYSTFTCTLGNYTLLIYVQWAYFSLYSNNTYTGPNLFGYYYQTGTTKPSSP
                     NLYGTKGTSPSPTPPSPEHQSDSLALQAAKAIAIGVATMVVFEAIKYLAKLTYNALSS
                     AIQRLRGQGNALEQEGGNEPVDEEEANQFNEQDDPAGDDDDNDDNDDDNDDNNDDNND
                     DNNDDNNDDNNDDNSDDSSSCFLTTAVVNSLGMTATSEPLMLARYLRDEKMTSTKERS
                     AVDLYYKVAPEIVQRSTDAEWHEFWAQHLRPITELIKLGQYDLAKSLYSLATAELIDR
                     KVTTFKDTEIVDEVYRYGLGSFAKIRLPYTLRFVILKLALRVELTYRS"
     gene            complement(3331..4626)
                     /locus_tag="VLL76_01595"
     CDS             complement(3331..4626)
                     /locus_tag="VLL76_01595"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV28211.1"
                     /translation="MAARNASVVLDRELLELVSSLVCLLEDDHVTFLNEAGARMLGLA
                     TPSEAVGRSFDEWIVADYRFLLEAGWDLLAEEEFVPLKLTRADETLFEAEMRVRAVKG
                     QDNTFLIEARDISKFVKSAEALREREERLQGILSSVAEGIVAINDSGRIESANPAAEK
                     MFGYDRNNKLVGRDFSDLMPAELRDRHEHFFNAYMSGLFPTMMNRTVEGMGQRANGSV
                     FAMEISVSELRHGRHRLFTAILRDISERKEHEDRIRRLAHHDSLTGLPNRNLLNDRMN
                     HALARVKRNGGRMAVLYVDLDRFKPINDTLGHEAGDAVLREVARRLTSCIRSSDTVAR
                     VGGDEFVVVVEEIGRSTEAALVAKKIIDTLGRPIHYGDTPCTIGASIGAAVFPDDGET
                     MDEVCKAADIAMYRVKRAGRNAFCFFSGAGSVEECVEGE"
     gene            complement(4731..5651)
                     /locus_tag="VLL76_01600"
     CDS             complement(4731..5651)
                     /locus_tag="VLL76_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HSV28212.1"
                     /translation="MKLEDLKTGGKAALARALAELERAPDAPATIALLDEAYAEPTAH
                     VVGMTGPPGVGKSTLMNALIAGWRAGGRRVACIAVDPSSRRSGGALLGDRTRLSTDPE
                     DQGVFVRSMAARDRLGGLAALTVSAMVLMRALYDVVLIETVGVGQSETDVVGVADTVL
                     FCVQPGSGDSLQFMKAGIAEIPHVVVVTKADMDQAAKRARADVLGALSLADPGESMGW
                     EVPVLLVSSARRQGVDDLIGAIDRHRAFLVEDDRLGRARHAQARLWLEEAVRERFGRE
                     GIRRAGNLSLPPAMSPFRRLGEVAATLGHR"
     gene            5736..6215
                     /locus_tag="VLL76_01605"
     CDS             5736..6215
                     /locus_tag="VLL76_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HSV28213.1"
                     /translation="MIAVLSSRQIALFVLAASAIALASAFTAEYGFGLRPCVLCLTQR
                     VPFVIAGALAAAVLLPRGGRWGRGLLALAGLAFLVNSGIAVYHVGVEQKWWASSCAPA
                     AAAPLDDLSAAMSKPVEVRCDEPAWQWNGISMAALNIVFSGGLALVTLSLVRRMEPK"
     gene            6212..6781
                     /locus_tag="VLL76_01610"
     CDS             6212..6781
                     /locus_tag="VLL76_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethoxyubiquinone hydroxylase family protein"
                     /protein_id="HSV28214.1"
                     /translation="MTAPHRITKTAEDRIPGDLTKDQLIARILRVDQAGELGAVRIYQ
                     GQRAILGKGRHGPLLTKMAEQEQHHLDTFSRLISERRVRPTMLAPIWHVAGFALGAAT
                     ALMGERAAMACTVAVEEAIDEHYADQHARLGDDEAELKATIEKFREEELEHRDIGLAN
                     EAEKAPGYPILSAAIKTGCRMAIWLSERV"
     gene            6781..>7091
                     /locus_tag="VLL76_01615"
     CDS             6781..>7091
                     /locus_tag="VLL76_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV28215.1"
                     /translation="MKRPAIDPAVEAEAQTGTIYPDPFKAVVAGRTKRRLGPLLGLTD
                     FGVNLTELAPGAASALRHWHHKEDEFVYVLEGEVTLVTDAGEQVLKAGQAAGFPKGVA
                     DG"
BASE COUNT         1159 a         2229 c         2390 g         1313 t
ORIGIN      
        1 ccgaccggta ggtcagctcg accctgaggg caagcttcag gatgacgaac cgaagcgtgt
       61 acggaagcct gatcttggcg aagctgccaa ggccgtagcg gtacacctcg tcgacgatct
      121 cggtgtcctt gaacgtggtg accttccggt cgatcagttc cgccgtggcc aaggaataga
      181 gcgacttcgc caggtcgtac tgccccagct tgatcaactc cgtgatgggg cggagatgct
      241 gggcccagaa ctcgtgccac tcggcatccg tcgaacgctg cacgatctcg ggcgcgacct
      301 tgtaatagag atcgacggcc gagcgttcct tggtgctcgt catcttctcg tcgcgcaggt
      361 atcgggcaag catcagcggc tcgctggtcg ccgtcatccc caggctgttg acaaccgccg
      421 tcgtcaggaa gcagctgctg ctgtcgtcgc tgttgtcgtc attgttgtca tcattgttgt
      481 cgtcgttgtt gtcgtcattg ttgtcatcgt tgttgtcgtc attgtcgtcg tcgttgtcgt
      541 cgttgtcgtc gtcatcgccg gcggggtcgt cttgctcgtt gaactggttg gcctcttctt
      601 catcgacggg ctcgttgccg ccttcctgtt caagcgcgtt gccttggccg cgcagcctct
      661 ggatggcgct gctcaacgcg ttgtaggtca gcttggcgag atacttgatt gcctcgaaca
      721 ccaccatggt cgcaacgccg atggcgatgg ccttggcggc ctgcagcgca agcgagtcgg
      781 actggtgctc cggcgagggc ggggtcggcg acggactcgt tcccttggtg ccgtagaggt
      841 tgggcgagga cggcttcgtg gtgccggtct ggtagtagta cccgaagagg ttcgggccgg
      901 tgtaggtgtt gttggaatac agcgagaaat acgcccattg cacatagatc agcagcgtgt
      961 agttgccgag agtgcaggtg aacgtgctgt agagcgggct gaacgtggcg ggcgcggtca
     1021 tgccctggaa ggtgatcgtc gagccgtccg acgagatgac caactgggcc gacgacgagt
     1081 tcagggtgca ggaataggtg gccccccaat agctgggcga atcgacgcca cagggctgag
     1141 ccgccgccgt cgccgagtac acgctgcgac gtccgctgga cgtgatcgcc ggactcccgt
     1201 tggtggaggt caggttggcc gtcatgttga agtcggtgtt ctgcgtgccg ttgatggtca
     1261 cgaagcagga cgacagggtg atggtgccgt tgtacgggaa tgcggtcgaa gcgccgacaa
     1321 agaaggttcc cgtggtctga ttgaagccga cactggcggt gatgtcgacg agagggatgg
     1381 tcggggtcgc gaccttcacc tgcaacgcgc cattgttgct gagcagcatc acgtagaggc
     1441 tcgcctgacc atcggaagtg aaggtctggt agtcgccata ggcgacggaa acggcggtcc
     1501 cgaacggcgg ataggtcgtg ttgccggccg tggacgacga ggtcagggcc acgctggtgg
     1561 aggagtcgga atccgggccg gtgccggggt cgatcgtgcc gccggcgacg gtctgaatgg
     1621 cgttgtagac ctgatccgtc gtgacgcccg accagccgga gctgttgatg tagtcctgga
     1681 cggcggcatc gccggcggcg gcggtcccgc cactggccag gccgttgtaa taggtgttgt
     1741 acaggattgc ggtgttgccg gtctccaaca ggttgttcag gaagctgttg gcgctgaccg
     1801 acgacgaatc ggtggacgac gagcttgtag tggcaaagct ttccgttccg gtgctgccga
     1861 gcttggagac ctgcgagacc cgcccgatgg acccggacag cagcgcccgc tgttcttcct
     1921 tcgaaagctg cgaatagccc ttcagggtgc cgcgcggatc gaccaggaaa ttcttgagga
     1981 cgcgcgtgtc ggtcgccatg tcctccatca gcttcagcat cgttccgctt gcgcgccgct
     2041 cgacatagtc ttccggaagc tggtggttgg gcagttcgtc cgccaccttc ttcgtcttgg
     2101 cgctgttggc cgtttcccac ttggtggggc ccatggccac gaccgcgccg gccttgccgt
     2161 agccggacgc ctcgacccgc tccttgaccg cggccgacaa ggtcttcggc gggatgtaga
     2221 gggtggacac gccggtgacg tgcttgcgct ggatctcggg gttgagcagg tccgacaggt
     2281 tcagcgcgat cttttccgac gggatgccgg ggaagctgga gccgcggtac acggtgcacg
     2341 gggcgtcgcc gccatagtct tccatcagcg cttcgatcag cagccggaag ttcttcttct
     2401 cgtatccgcg gaaattgaac gtgctgtcgg cgaaggcgcc gatctgcagc atgatgacct
     2461 ggctgtccgt gttcagcttg cgcttgcgga tgtagtagtc ggtggcgtcc acgatctggc
     2521 agccgttgcg ggacggatcg acctcgagat cggcgaacag ataatccatc gtcgtgatgc
     2581 cgggatacac gatggcttca tgaccctctt gccggctctg atagacgacg cgacgaaccg
     2641 ctttcacgaa cacggcgggg tggccataga acacggcgca cacagactca ccgttcctga
     2701 ccgccgcgag aatgacttca gccatctgca ggtaggtgat gtttcgttcc ttgccggtgc
     2761 cataatattg gtaaaggtcg tggcagtttt cgttcaggga acgaataaaa gctgccgtca
     2821 cgccatccgc agcgtgatag aagacgcggt ccgctgcctt gatctcggcg acggattcca
     2881 gcgtcatgtg cgaaatagac ttaagaccag ttccgacaaa ggcgacgcgc ccctttttgg
     2941 tgacgcttga tacctgcatt tcagacgaca tggttcctcc ctcctccact tggatctccg
     3001 acggctggtc gaatggtatg caactcccag gagtgcatat cacgattgat ctatgtctgg
     3061 ttatactggt ggaggatgcg cagtcaacgg tagaggtatg tcgctggtaa ttcgtcgtaa
     3121 atgtgtttct attaggggtg gtgccgctac aaatagaatg ttgacaaggg gggctgcgag
     3181 ggggcggatc tggaggccat gtgtgcgcag tggcacctgc gactgcacgc cgatccggcc
     3241 catcgctggc tgcgtggtgt tgttcagcag gcgtgcgcgg ttaatcgctc ggaagttgaa
     3301 tgagtgtgcg ccggcccccg cgaggcggca tcattcgccc tcgacgcatt cctccacgct
     3361 gccggctccc gagaagaagc agaaggcgtt ccggccggcg cgtttgacgc ggtacatggc
     3421 gatgtcggcg gccttgcaga cctcgtccat ggtttcgccg tcgtcgggga acacggcggc
     3481 gccgatcgag gcgccgatcg tgcagggggt gtcgccgtaa tggatggggc ggcccagggt
     3541 gtcgatgatc ttcttcgcca ccagcgcggc ctcggtcgag cggccgattt cttccaccac
     3601 cactacgaac tcgtcaccgc cgacccgggc caccgtgtcg gacgagcgga tgcaagaggt
     3661 caggcggcgg gcgacctcgc gcaacacggc gtcgccggcc tcgtgaccca gggtgtcgtt
     3721 gatcggcttg aagcggtcga ggtccacata cagcaccgcc atgcgcccgc cgttgcgctt
     3781 cacgcgcgcc agggcgtggt tcatgcggtc gttgagcagg ttgcggttgg gcaggccggt
     3841 cagcgaatcg tggtgggcga ggcggcggat gcggtcctcg tgctccttgc gctcggagat
     3901 gtcgcgcagg atggcggtga acaggcggtg gcggccgtga cgcagctcgc tgaccgaaat
     3961 ttccatggcg aacaccgaac cgttggcgcg ctggcccatg ccttcgacgg tgcggttcat
     4021 catggtcggg aacaggcccg acatgtaggc attgaagaaa tgctcgtggc ggtcgcgcaa
     4081 ttcggcgggc atcaagtcgc tgaaatcgcg gccgaccagt ttgttgttgc ggtcgtagcc
     4141 gaacatcttt tccgccgccg ggttggccga ttcgatgcgg ccgctgtcgt tgatggcgac
     4201 gatgccctcg gccaccgacg acaagatgcc ctgcagccgt tcctcgcgct cgcgcagggc
     4261 ctcggccgac ttgacgaatt tcgagatgtc gcgcgcctcg atcaggaagg tgttgtcctg
     4321 gcccttgacc gcgcgcaccc gcatctcggc ctcgaacagg gtttcgtcgg cgcgggtgag
     4381 cttcagcgga acgaattctt cctcggccag caaatcccag ccggcctcga gcaggaagcg
     4441 atagtcggcg actatccatt cgtcgaagga gcgcccgacc gcctcgctcg gcgtggccag
     4501 ccccagcatg cgggcgccgg cttcgttgag gaaggtaacg tggtcgtctt ccagcaggca
     4561 gacgagcgaa gacacgagct ccagcagctc gcggtcgagc acgacggacg cattccgggc
     4621 cgccatcgat gccgtcactc gctcataccc tccatatcct tatggatgat ggtctttcca
     4681 aatctaccca aatgtcaata cgcgggtcta atacgcacag cttacaacga ttagcggtgg
     4741 cccagcgttg ccgccacttc gcccaggcgg cggaacggcg acatggcggg gggcagcgac
     4801 aggttgccgg cgcggcggat gccctcgcgg ccgaaccgct cgcgcaccgc ttcctccagc
     4861 cacagccgcg cctgggcatg gcgggcgcgg cccaggcggt cgtcctcgac caggaaggcg
     4921 cggtggcggt cgatggcgcc gatcaggtca tcgacgccct ggcgccgggc cgacgacacc
     4981 agcagcaccg gcacctccca gcccatggat tcgccgggat cggccagcga cagcgcgccc
     5041 agcacgtcgg cacgggcgcg cttggcggcc tggtccatgt cggccttggt gaccaccacc
     5101 acatgcggga tctcggcgat gcccgccttc atgaattgca gcgagtcgcc cgaacccggc
     5161 tggacgcaga acagcacggt gtcggcgacg ccgaccacgt cggtctcgct ctggccgacg
     5221 cccaccgtct cgatcagcac cacgtcatac agcgcccgca tcagcaccat ggccgacacc
     5281 gtcagcgccg ccaggccgcc caggcggtcg cgcgccgcca tggagcggac gaacaccccc
     5341 tggtcctcgg ggtcggtgga cagccgggtg cggtcgccca gcagcgcgcc gcccgaccgc
     5401 cgcgacgacg ggtccaccgc gatgcaggcg acacggcggc cgccggcgcg ccagccggcg
     5461 atcagggcgt tcatcagggt cgatttgccg acgccgggcg ggccggtcat gccgaccaca
     5521 tgggcggtcg gctcggcata ggcctcgtcc agcaacgcta tggtcgcggg cgcgtcgggg
     5581 gcgcgctcca actcggccaa tgcgcgggcc agggccgcct tgccgccggt cttgaggtct
     5641 tccagtttca acgcgatctc cgtaatggtc acgccagtct cgccacccgg cgcgaggtgg
     5701 tcaagcgggc ggcgcggtga tatggtccga cgaccatgat cgcagtcctt tcgtcccgcc
     5761 aaatcgccct gttcgtgctg gccgcgagcg caattgccct ggcgtccgcc ttcaccgccg
     5821 aatacggttt cggcctgcgc ccctgcgtgc tgtgcctgac ccagagggtg ccgttcgtca
     5881 tcgccggcgc gctggcggcg gcggtgctgc tgccgcgcgg ggggcggtgg gggcgggggc
     5941 tgctggcctt ggccggcctc gccttcctgg tcaattccgg catcgccgtc taccatgtcg
     6001 gcgtcgagca gaaatggtgg gcgtcgtcct gcgcccccgc cgccgccgca ccgctggacg
     6061 acctgtccgc cgccatgagc aagccggtcg aagtgcgttg cgacgagccc gcctggcagt
     6121 ggaacggcat ctccatggcc gcgctcaaca tcgtcttttc gggtggcctc gccttggtca
     6181 ccctgtccct ggtccgccgc atggagccga aatgaccgcg ccgcaccgca tcaccaagac
     6241 cgccgaggac cgcattcccg gcgacctcac caaggaccag ttgatcgccc gcatcctgcg
     6301 cgtcgaccag gccggcgagc ttggcgccgt gcgcatctac cagggccagc gcgccatcct
     6361 gggcaagggc cgccacggcc cgctgctgac caagatggcc gagcaggaac agcaccacct
     6421 ggacaccttc agccgcctga tctcggagcg ccgggtgcgc ccgaccatgc tggcccccat
     6481 ctggcacgtc gccggcttcg ccctgggcgc cgccaccgcg ctgatgggcg agcgcgccgc
     6541 catggcttgc accgtcgcgg tggaagaggc catcgacgag cattacgccg accagcacgc
     6601 caggctgggc gacgacgagg ccgaactgaa ggccaccatc gagaagttcc gcgaagagga
     6661 attggagcac cgcgacatcg gcctcgccaa cgaggcggaa aaggcgccgg gctatcccat
     6721 cctgtccgcc gcgatcaaga ccggctgccg catggcgatc tggttgagcg agcgggtgtg
     6781 atgaaaaggc cggccatcga cccggctgtc gaggccgagg cccagaccgg gaccatctac
     6841 cccgacccct tcaaggccgt ggtggcgggg cggaccaagc gccggttggg gccgctgctg
     6901 ggcttgaccg attttggtgt caacctgacc gagttggcac ccggcgccgc gtcggcgctg
     6961 cgccactggc accataagga agacgaattc gtctacgtgc tggaaggcga ggtcaccctg
     7021 gtcaccgacg ccggcgagca ggtgctgaag gccggccagg cagcgggctt ccccaagggc
     7081 gtcgccgacg g
//
LOCUS       DATIKR010000104         5724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_134804, whole genome shotgun sequence.
ACCESSION   DATIKR010000104 DATIKR010000000
VERSION     DATIKR010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5724
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134804"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1134
                     /locus_tag="VLL76_01620"
     CDS             <1..1134
                     /locus_tag="VLL76_01620"
                     /inference="COORDINATES: protein motif:HMM:NF040307.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6044 family protein"
                     /protein_id="HSV28216.1"
                     /translation="WLAQWLPVLSGFNAHRFTVDAPFVLAGGAAWSLHRIVQRTDARR
                     GRWIVGGVLGALALPTLVLQAADARDWLQWGSFAANWQSPALRELARSQSPDDPFRVA
                     TIQENGLQSGYTNAYGLEAADGYINLYARGYHRLWQAVIEPYLDRDADKRRYFLENGA
                     RVSLYTDDGHALPLPTGDYFRTSLLALLNVRYLVTNVPLAGDGLEIVEHTRPDRWWDE
                     LPAGEKIRRRLTENFSGRHMVLYRVTGARPRWWLAETVRAYDGDDRLAQALRTEDAAA
                     LARAPLLPAADAVRLGLADGARLGRGTITPAGYGTDAIDLAVDCEDACLLVVANSYSP
                     FWQAEIDGRPAGIGQAYGALWAIRIPGGQHRVAFRYRPPYAFH"
     gene            1144..1908
                     /locus_tag="VLL76_01625"
     CDS             1144..1908
                     /locus_tag="VLL76_01625"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV28217.1"
                     /translation="MDDHVYEVHAALEDRHWWFEGRRRIVYPLIDDLVARRPGMVVDI
                     GCGTGGTIAPLGGKYQVLGIDAAQGAIDIARRKYPGVEFRVGLAPDAIADVMEHASVL
                     TMMDVLEHIEDDAAALARIVEAMRPGSFMLITVPAGMELWSGHDEVAHHLRRYDRDGL
                     RRCWQGLPVREIVLTPYNTLLYPAIWAVRQVTRRLKSDGGAPRTDFHLPSPPVNALLA
                     ALFGAEGGRIRAVARGERAATGYPFGVSLLAVIERI"
     gene            complement(1905..3266)
                     /locus_tag="VLL76_01630"
     CDS             complement(1905..3266)
                     /locus_tag="VLL76_01630"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSV28218.1"
                     /translation="MTLTPGILTGWARRHRAGCLVARPADSGEAAAIVRSCAERGWTI
                     VPRGHGCSYTGNALNDGNVVLDTGGLDRIIGFDADTGIVTAEAGVSLARIVDLALPLG
                     WVPGGVPGSPSVTVGGAIGNNVHGKDSFSAGPFGNAVRRVAVLEADGEIRHYTPADEA
                     FRHIIGGFGLLGIVVEADIQLRKVRGPMVESRVVAFRDLAELADLFETHRGDTDLMLG
                     WVDAFSPQGRGSLELGNFVAAPAGRTIPPVAGRPERFFGLLPPGPIYPVARPLMSGLV
                     MRAHNEAKYRADKGGKTSCVDFGSHVFPLAFTVPDVAALFPGGLIEAQVLIPAGGAVA
                     THSAILALCRDHGAQSWLCSAKRCSADGFPLSFAGDGISLSICIPGRRARARDFEAFY
                     RRLVDTVAEAGGLINLSKDEFMRPHDIRRLYPGLDPFLAFKARHDPETRFSSDFHRRL
                     QER"
     gene            complement(3263..4723)
                     /locus_tag="VLL76_01635"
     CDS             complement(3263..4723)
                     /locus_tag="VLL76_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018510053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV28219.1"
                     /translation="MTLPITDAKPRLLSVADAEALSIRDIWRLHGSHISPRQVNIFSS
                     FGYGHDVFMQSEGMWMTTADGRRILDFTGGFGVLNHGHNHPRILAARRAFADSKRMEV
                     HKVVFSPYMTALAHNVASLLPGDLNKCFFPNSGAEAVEGALKIAYKSRPDRRAFVLHA
                     EDSFHGKLIASGTITGSQAKVWDFPSLPNTASFRRNDLDSVEALVRSLRKPEGGSNVY
                     AIAIEPFHATTMTPCSGEFLAGLRAICDREGIALIFDEVYSGWGKSGHLFAFMAHDVV
                     PDMLCMSKSFGGGKASISGLVVRDPVFMAAYGTDGTALLQSSTYNGFGEECVTALEAV
                     NIVVEEDFPARARHIHAVLREGFERLQAKFPGAIKEVRGQGGFNGMVLNSPFELIEKA
                     IAHVPFLLKDKRYFINKIAAAAVVDEMYRNHGILSTMTENGDLVLYSALPSLIAGDAE
                     LRQYLGALEQVLDKGLMRVSAEFVGSKLAMMLKGMA"
     gene            complement(4720..>5724)
                     /locus_tag="VLL76_01640"
     CDS             complement(4720..>5724)
                     /locus_tag="VLL76_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28220.1"
                     /translation="QSTPDHLRHPPAGNRIGRYLGWFAAGFALTLVVMVAALTATRAR
                     ITDCDGRFHDQDHFLAWCGSPAFQDYEHGAFAMRLEPEAVAHARAADVLVLGSSLAQN
                     GFSSQATRDHFAGRGLRHFLLAFGHAETSVFPQELIRQLDLRPRLVIVNAADFFADQM
                     SGVGAGVVYPSAVGIIEYRAKQLLQPIHAWACTAYPGLACGDAPTIYRSRRDGHWAMH
                     NFPDRHVPVTLSGGIADPAVVTRQSALAVKLRAFLQARGACLVLSATPSEDGRHAAEA
                     RAIGAATGIPAIVPALDGLTSYDGAHLDGRSAEIFSAAVLAGLSEAEARCAAPAERNR
                     "
BASE COUNT          867 a         1949 c         2070 g          838 t
ORIGIN      
        1 tggctggccc agtggctgcc ggtgctgtcc ggcttcaacg cccaccgctt caccgtcgac
       61 gccccgttcg tcctggccgg cggcgccgcc tggagtctgc accggatcgt ccagcggacg
      121 gacgcccggc ggggccgttg gatcgtcggc ggcgtgctgg gcgccctcgc cctccccacc
      181 ctggtgctgc aggccgccga cgcgcgcgac tggctgcaat ggggcagctt cgccgccaac
      241 tggcaaagcc cggccttgcg ggaactggcc cggtcgcaat cgcccgacga ccccttccgc
      301 gtcgccacca tccaggagaa cggcctgcaa tcgggctaca ccaacgccta tgggctggag
      361 gcggccgacg gctacatcaa cctgtatgcg cgcggctatc accggctgtg gcaggcggtg
      421 atcgagccct atctcgaccg tgacgccgac aagcggcgct atttcctgga gaacggcgcc
      481 cgcgtcagcc tctacaccga cgacggccat gccctgccgc tgccgaccgg cgactatttc
      541 cgcacctcgc tgctggcgct gctcaacgtc cgttatctgg tcaccaacgt tccgctggcc
      601 ggcgacggac tcgagatcgt cgagcacacg cgccccgacc gctggtggga cgagcttccc
      661 gccggcgaga agatccgccg ccgcctgacg gagaacttct cgggccgcca catggtgctg
      721 taccgggtga ccggggcgcg gccgcgctgg tggctggccg agaccgtgcg ggcctatgac
      781 ggcgacgacc ggctggccca ggcgctgcgg acggaagacg ccgccgccct ggcgcgggcg
      841 ccgctgctgc cggcggccga cgccgtccgg ctggggctcg ccgacggtgc ccgcttgggc
      901 cgtgggacga tcacgcccgc cggctacggc accgatgcca tcgatctggc ggtcgattgc
      961 gaagatgcgt gccttctggt cgtcgccaat tcatattcgc cgttctggca ggccgagatc
     1021 gatggccggc cggccgggat cggccaggca tacggcgccc tgtgggccat ccgcattccc
     1081 ggcggacagc atcgcgtggc gttccgctat cgcccgcctt acgcctttca ctgagggacg
     1141 gacatggacg atcacgttta cgaggtccac gcagcactcg aggatcgcca ttggtggttc
     1201 gagggccgcc ggcggatcgt ctaccccctg atcgacgacc tggtggcgcg gcgcccgggc
     1261 atggtggtcg acatcggctg cggcaccggc ggcaccatcg cgccgctggg cggcaagtac
     1321 caggtgctgg ggatcgacgc ggcccagggc gccatcgaca tcgcccggcg caagtatccc
     1381 ggcgtcgagt tccgggtcgg cctcgccccc gacgccatcg ccgacgtgat ggagcacgcc
     1441 tcggtgctga ccatgatgga cgtgctggag cacatcgagg acgatgcggc ggcgcttgcc
     1501 cgcatcgtcg aggccatgcg ccccggctcg ttcatgctga tcaccgtgcc ggccggcatg
     1561 gaattgtgga gcggccacga cgaggtcgcc caccacctgc gccgctacga ccgcgacggc
     1621 ctgcgccggt gctggcaggg cctgccggtg cgcgagatcg tgctaacccc gtacaacacc
     1681 ctgctctatc ccgccatctg ggcggtgcgc caggtgaccc ggcggctcaa gtccgacggc
     1741 ggcgcgccgc gcaccgactt ccacctgcct tctccgcccg tcaacgccct gctggcggcg
     1801 ttgttcggcg ccgagggcgg gcggatccgg gcggtggcgc ggggagagcg ggcggcgacg
     1861 ggctatccgt tcggcgtcag cctgctggcg gtgatcgaga gaatttagcg ttcctgcaag
     1921 cgccggtgga agtcgctgct gaagcgggtc tcggggtcgt gacgggcctt gaaggccagg
     1981 aacgggtcga ggccgggata caggcggcgg atgtcgtggg gccgcatgaa ctcgtccttg
     2041 ctcaggttga tcagaccgcc cgcttccgcg accgtgtcca ccagccggcg gtagaaggcc
     2101 tcgaagtcgc gggcccgggc gcggcggccg gggatgcaga tggacagcga gatgccgtcg
     2161 cccgcgaagg acagcgggaa gccgtcggcg ctgcagcgct tggccgagca cagccacgat
     2221 tgcgcgccat ggtcgcggca cagcgccagg atggcggaat gggtcgccac cgcgccgccg
     2281 gccgggatca gcacctgcgc ctcgatcagg ccgccgggga acagcgccgc cacgtcgggg
     2341 acggtgaagg ccagcgggaa gacgtggctg ccgaaatcga cgcaggacgt cttgcccccc
     2401 ttgtcggcgc ggtacttggc ctcgttgtgg gcccgcatca ccaggccgct catcagcggc
     2461 cgcgccaccg gatagatggg gccgggcggc agcagcccga agaagcgttc gggccggccg
     2521 gcgaccggcg ggatggtccg gccggccggc gccgcgacga agttgcccag ttccaggctg
     2581 ccccgcccct gcggcgaaaa cgcgtccacc catcccagca tcaggtcggt gtcgccccgg
     2641 tgggtctcga acaggtcggc cagctcggcc aggtcgcgga aggcgacgac ccggctttcc
     2701 accatggggc cgcgcacctt gcgcagctgg atgtcggctt cgaccacgat gccgagcagg
     2761 ccgaagccgc cgatgatgtg ccggaacgcc tcgtcggcgg gggtgtaatg gcggatttca
     2821 ccgtcggcct cgagcaccgc cacccggcgg acggcgttgc cgaacgggcc ggccgagaag
     2881 gaatccttgc cgtggacgtt gttgccgatg gccccgccca ccgtcaccga cgggctgccg
     2941 ggcacgccgc cgggcaccca gcccagcggc agggcgagat cgacgatgcg ggcaaggctg
     3001 acgccggcct cggcggtcac gatgccggtg tcggcgtcga acccgatgat gcggtcgagc
     3061 ccgccggtat ccagcaccac gttgccgtcg ttcagggcgt tgccggtata ggaacagccg
     3121 tgcccgcgcg gcacgatggt ccagccgcgc tcggcgcacg agcgcacgat ggcggcggcc
     3181 tcgccggaat cggccgggcg cgccaccagg cacccggcac ggtggcgccg cgcccacccg
     3241 gtcaggatgc cgggcgtcag cgtcatgcca tgcccttgag catcatcgcc agcttcgagc
     3301 ccacgaattc ggccgacacc cgcatcaggc ccttgtccag cacctgctcg agcgcgccga
     3361 gatactgccg cagctcggca tcgccggcga tcaggctggg cagggccgag tacagcacca
     3421 ggtcgccgtt ctcggtcatg gtcgaaagga tgccgtggtt gcggtacatc tcgtcgacca
     3481 cggcggcggc ggcgatcttg ttgatgaaat agcgcttgtc cttcagcagg aagggcacgt
     3541 gcgcgatggc cttctcgatc agctcgaacg gcgagttcag caccatgccg ttgaagccgc
     3601 cctggccgcg cacctccttg atggcgccgg ggaacttcgc ctgcagccgc tcgaagcctt
     3661 cgcgcagcac cgcgtggatg tggcgggcgc gggccgggaa gtcctcttcc accacgatgt
     3721 tgaccgcttc cagcgcggtc acgcattcct cgccgaagcc gttgtaggtg ctggattgca
     3781 gcagagcggt gccgtcggtg ccgtaggccg ccatgaagac ggggtcgcgc accaccagcc
     3841 ccgagatcga cgccttgccg ccgccgaacg atttggacat gcacagcatg tcgggcacca
     3901 cgtcatgggc catgaaggcg aacagatggc ccgacttgcc ccagccggaa tagacctcgt
     3961 cgaaaatcag cgcgatgccc tcgcggtcgc agatggcacg caggccggcc aggaattcgc
     4021 cgctgcacgg cgtcatggtg gtagcgtgga acggctcgat ggcgatggcg tagacgttcg
     4081 acccgccctc gggcttgcgc aggctgcgca ccagcgcctc gaccgagtcc aggtcgttgc
     4141 ggcggaacga cgcggtgttg ggcaggctgg ggaagtccca caccttggcc tgcgatccgg
     4201 tgatggtgcc cgacgcgatc agcttgccgt ggaacgaatc ctcggcatgc aggacgaagg
     4261 cgcggcggtc ggggcgcgac ttgtaggcga tcttcagcgc cccctcgacc gcctcggcgc
     4321 cggaattggg gaagaagcac ttgttgaggt cgcccggcag caggctggcc acgttgtggg
     4381 ccagcgccgt catgtagggc gagaacacga ccttgtgcac ctccatccgc ttgctgtcgg
     4441 cgaaggcgcg gcgcgccgcc aggatgcgcg gatggttgtg gccgtggttc agcacgccga
     4501 agccgccggt gaaatccagg atgcggcggc cgtcggcggt ggtcatccac atgccttccg
     4561 actgcatgaa cacgtcgtgg ccgtagccga aggacgagaa gatgttgacc tgccgggggc
     4621 tgatatggct gccgtgcagc cgccagatgt cgcggatgga cagcgcctcg gcgtcggcga
     4681 ccgaaagcag gcggggtttg gcgtcggtga tcggcagggt catcggttcc tctcggcagg
     4741 ggcggcgcac cgcgcttcgg cctcggaaag gcccgccagc acggcggcgg aaaagatttc
     4801 ggcgctgcgc ccatccagat gcgccccgtc gtaggaggtc agtccgtcga gcgcgggcac
     4861 gattgcgggg atgcccgtgg ccgcgccgat ggcccgcgcc tcggcggcat ggcggccatc
     4921 ttccgacggc gtcgcggaaa gcacaagaca tgcgccgcgc gcttgcagga aggcgcgcag
     4981 tttcaccgcc agggccgact ggcgggtgac gacggccggg tcggcgatgc cgcccgacag
     5041 ggtgaccggg acgtggcggt cggggaagtt gtgcatggcc caatgcccgt cccggcggga
     5101 gcggtagatg gtgggcgcgt cgccgcaggc caggccggga taggccgtgc acgcccaggc
     5161 atggatgggt tgcagcagct gcttggcgcg gtactcgatg atccccaccg cgctgggata
     5221 gacgacgccg gcgccgactc ccgacatctg gtcggcgaag aagtcggcgg cgttgacgat
     5281 gaccaggcgg gggcgcaggt cgagctggcg gatcagctcc tgcgggaaca cgctggtttc
     5341 ggcatggccg aaggccagca ggaagtggcg tagcccgcgc ccggcgaaat ggtcgcgggt
     5401 ggcctgggag gaaaagccgt tctgggccag cgagctgccc agcaccagga catccgccgc
     5461 gcgcgcgtgg gcaaccgcct cgggttccag ccgcatggcg aaggcgccgt gctcgtaatc
     5521 ctggaaggcc ggcgacccgc accaggccag gaaatggtcc tggtcatgga agcggccgtc
     5581 gcaatcggtg atgcgcgcgc gcgtcgccgt cagcgccgcc accatcacca cgagcgtcag
     5641 cgcgaaaccg gcggcaaacc agccgagata gcgcccgatc cggttgccgg ccggcgggtg
     5701 gcgcaggtga tcgggggtgg attg
//
LOCUS       DATIKR010000105         2372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_182891, whole genome shotgun sequence.
ACCESSION   DATIKR010000105 DATIKR010000000
VERSION     DATIKR010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182891"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /locus_tag="VLL76_01645"
     CDS             <1..811
                     /locus_tag="VLL76_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSV28221.1"
                     /translation="FCEDVMRWRSLLDTMAHPELTAQVLDESGYTEMWQNDKSPEAPG
                     RLENLKELVHALEEYDSLQGFLEHVALVMENDEKSDTDKVVLMTLHGAKGLEFDSIFL
                     PGWEEGVFPHQRALDESGAQGLEEERRLAYVGLTRAKKRILVTFAANRRIYNQWQTAL
                     PSRFLDELPEGHVEREAERGLYAGGGLSESAGRWSGGGSYQRRQPPTIEATSWKVAAR
                     QPQPAGFDPGDRVFHSKFGNGTVIAVDGDKLEIAFDKAGTKKVLESFVELV"
     gene            912..1811
                     /locus_tag="VLL76_01650"
     CDS             912..1811
                     /locus_tag="VLL76_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HSV28222.1"
                     /translation="MATVFPDVWRLHLTVEPEALPVFEEVFERFAESVTMFMEDKSGI
                     SDGDCLWYLEGYSRTPPDRTEIVSALSAVAAAMGIEVPPLEVARVPNVDWVLENLRDF
                     PPIDAGRFFVRGSHWDGRVPVGRIELKVDAGTAFGSGEHATTKGCLLALDGLAKKRRF
                     TRPLDLGSGSGILGIAMAKMWACDVLATDIDPSAVKVANSNARENGMAERFTAVVSDG
                     YRNPALAKKKPFDIIVANILARPLMRFAPALAAHLAPDGVAVLSGLLEWQERMVMGVH
                     ERQGLRLKHRIKLDGWATLVIGR"
     gene            1970..>2372
                     /locus_tag="VLL76_01655"
     CDS             1970..>2372
                     /locus_tag="VLL76_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HSV28223.1"
                     /translation="MHDEPAPGPVPRQRLDDLRAELARRGLDGFIVPRADEHQGEYVP
                     PRAQRLAWLTGFTGSAGAAVVLADKAAIFVDGRYTIQVGQEVDTSLFEPQHLVERPPA
                     KWLGEALAPGARFGFDPWLHSPDQVEALRLAC"
BASE COUNT          392 a          813 c          795 g          372 t
ORIGIN      
        1 cttctgcgag gacgtcatgc gctggcgctc gctgcttgac accatggccc atcccgagct
       61 gacggcgcag gttctggacg aatcgggcta caccgagatg tggcagaacg acaagtcgcc
      121 cgaggcgccg ggccggctgg agaacctcaa ggaactggtc cacgcgctcg aggaatacga
      181 cagcctgcag ggcttcctcg agcacgtcgc cctggtgatg gaaaacgacg agaagtcgga
      241 caccgacaag gtcgtgctga tgacgctgca cggcgccaag ggcctggaat tcgacagcat
      301 cttcctgccc ggctgggagg aaggcgtgtt cccgcaccag cgcgccctgg acgaaagcgg
      361 cgcccaaggg ctggaggagg agcgccggct ggcctatgtc ggtctgaccc gcgccaagaa
      421 gcgcatcctg gtcaccttcg ccgccaatcg ccgcatctac aaccaatggc agacggcgct
      481 gcccagccgc ttcctcgacg agctgccgga aggccatgtc gagcgcgagg ccgagcgcgg
      541 cctctatgcc ggtggcggcc tgtcggaaag cgccggccgg tggtcgggcg gcggctcgta
      601 ccagcgccgc cagccgccca ccatcgaggc cacctcgtgg aaggtcgccg cccgtcagcc
      661 ccagcccgcc ggcttcgacc ccggcgaccg cgtgttccac agcaagttcg gcaacggcac
      721 ggtgatcgcg gtggacggcg acaagctgga aatcgccttc gacaaggccg gcaccaagaa
      781 ggtgctggaa agcttcgtcg agttggtgtg aatttgcctc gcctttttat gtcacccccg
      841 cgcaggcggg ggtccatgca tccatctgga ttcccgcctt cgcgggaatg acgatcttcc
      901 aggagtagag aatggccacc gtttttcccg atgtctggcg cctgcatctc accgtcgagc
      961 ccgaggcgct gcccgtgttc gaggaggtgt tcgaacgctt cgccgaatcg gtgaccatgt
     1021 tcatggaaga caagtcgggt atctcggacg gcgattgcct gtggtacctc gagggctatt
     1081 cgcgcacgcc gcccgaccgc accgagatcg tctcggccct gtccgccgtg gccgccgcca
     1141 tgggcatcga ggtgccgccg ctggaagtcg cccgcgtccc caacgtggat tgggtgctgg
     1201 agaatttgcg cgacttcccg cccatcgacg ccggccgctt cttcgtgcgc ggcagccatt
     1261 gggacggccg cgtgccggtg ggccgcatcg aattgaaggt ggacgccggc accgccttcg
     1321 gctcgggcga gcacgccacc accaagggct gcctgttggc gctggacgga ctggccaaga
     1381 agcgccgctt cacccggccg ctggacctgg gttcgggctc gggcatcctg ggcatcgcca
     1441 tggcgaagat gtgggcctgc gacgtgctgg cgaccgacat cgaccccagc gccgtcaagg
     1501 tcgccaacag caatgcccgc gagaacggca tggccgagcg cttcaccgcc gtggtcagcg
     1561 acggctaccg caaccccgcc ctggcgaaga agaagccgtt cgacatcatc gtcgccaaca
     1621 tcctggcccg cccgctgatg cgcttcgcgc ccgctttggc cgcccatctg gcgcccgatg
     1681 gcgtcgccgt gctgtcgggc ctgctggaat ggcaggagcg catggtgatg ggcgtgcacg
     1741 agcgccaggg cctgcgcctg aagcaccgca tcaagctgga cggctgggcg accctggtga
     1801 tcgggcgctg agcccatatg tcatgctgag caaagcgaag catctttcac gcgacgattc
     1861 cggccgacag cccggctgaa agatccctca ctgcgttcag gatgacaccg ggtaagcttg
     1921 ccgcacccca ctcaccaccc tacgtttggg atggtccaaa ggagcgccca tgcacgacga
     1981 acccgccccc ggccccgttc cgcgtcaacg cctcgacgac ctgcgcgccg agctggcgcg
     2041 gcgggggctg gacggcttca tcgtgccgcg tgccgacgaa caccagggcg agtacgtgcc
     2101 gccgcgcgcc cagcgcctgg cctggctgac cggcttcacc ggctcggccg gggcggcggt
     2161 ggtgctggcg gacaaggccg ccatcttcgt cgatggccgc tacaccatcc aggtcgggca
     2221 ggaagtggac acgtccctgt tcgagccgca gcacctggtg gaaaggccgc cggccaagtg
     2281 gctgggggag gcattagccc ccggcgcccg gttcggcttc gatccctggc tacacagccc
     2341 cgaccaggtg gaggcgttgc ggctggcctg cg
//
LOCUS       DATIKR010000106         1726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86345, whole genome shotgun sequence.
ACCESSION   DATIKR010000106 DATIKR010000000
VERSION     DATIKR010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86345"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VLL76_01660"
     CDS             complement(<1..417)
                     /locus_tag="VLL76_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28224.1"
                     /translation="MDSGHDATGTASEATDSVGCSTGGSIKHSYTVPCASAFREAVEA
                     LAARRRVNVGDIARSVLLVMPADTIAQYPDPGEPPADDRETVILKSGPAQGRPWRRKP
                     RLQVRMAPGYEIPFIRRALAIALAVERGQLNIHLHDP"
     gene            complement(549..>1726)
                     /locus_tag="VLL76_01665"
     CDS             complement(549..>1726)
                     /locus_tag="VLL76_01665"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GGDEF domain-containing phosphodiesterase"
                     /protein_id="HSV28225.1"
                     /translation="VGDQVLIAAADILQAALGQGDVMARAQGDRFLLLITGIGAKREI
                     QEAAEQLHRLAQTTVSVGGEEFEVSASCGLAMFPRDGEDAETLIKNAEAALERAKAQG
                     PGSLQVFSKDMSSRAAKTLSLQNRLRRALEHGEFIPYFQPQVDLANGAVVGMEALVRW
                     KSPELGMVAPGEFIPVAEESGLIDGICEVMLAACAKQNKEWQDAGLPAIPVAVNVSGR
                     QFQYAKRLITALETTLAFTGLDPRYLEIELTESSAMRDADNAIGVVQTLKDMGINCAI
                     DDFGTGYSSLSVLKRFPISKLKIDRSFVMDVITDPNDAAIVEAIVAMARALRMKVVAE
                     GVEHHAHLDFLRALGCDQMQGYLFSRPLPADEMGAMLADGRRLAMGEKRSRQHARTA"
BASE COUNT          264 a          574 c          598 g          290 t
ORIGIN      
        1 ggggtcgtgc agatggatgt tgagctggcc gcgctcgacc gccagcgcga tcgccagcgc
       61 ccggcggatg aaagggatct cgtagcccgg cgccatgcgc acctgcaggc gtggcttgcg
      121 ccgccacggc cggccctggg cgggaccgga tttcaggatc accgtctcgc ggtcgtcggc
      181 cggcggttcg ccgggatcgg ggtattgggc gatcgtgtcg gccggcatca ccagcagcac
      241 cgagcgggcg atgtcgccga cattgacccg gcggcgggcg gccaaggcct cgaccgcctc
      301 gcggaaggcc gaggcgcagg gcaccgtata ggaatgcttg atgctgccgc cggtgctgca
      361 acccacggaa tccgtggctt ccgaggcggt gccggtggcg tcgtggccgc tgtccatact
      421 gcccggcggg gtctgccgcc gtctcccctt ttcagtcgcg aaacgaatag gcccgtgggc
      481 cggcgccgtc aactaccgat gttggcgcat tcggcaagac tgaagcaaga gattgaaaaa
      541 acagtaaatc aggcggtgcg cgcgtgctgc cgcgaacgct tttcacccat ggcgaggcgg
      601 cggccgtcgg ccagcatggc gcccatctcg tcggccggca gcggccgcga gaacagatag
      661 ccctgcatct ggtcgcagcc cagcgcgcgc aggaagtcga gatgggcgtg atgttcgacg
      721 ccctcggcca ccaccttcat cctgagcgcc cgcgccatgg cgacgatggc ctcgacgatg
      781 gcggcgtcgt tggggtcggt gatgacgtcc atgacgaacg agcggtcgat cttgagcttg
      841 ctgatgggga agcgcttcag caccgacagc gacgaatagc cggtgccgaa atcgtcgatg
      901 gcgcagttga tgcccatgtc cttcagggtc tgcaccaccc cgatggcgtt gtcggcgtca
      961 cgcatggccg agctttcggt cagctcgatc tcgagatagc gcgggtcgag gccggtgaac
     1021 gccagcgtcg tctccagcgc cgtgatcagg cgcttggcgt attggaactg gcggcccgag
     1081 acgttgaccg ccaccgggat ggcgggcagg ccggcatcct gccattcctt gttctgcttg
     1141 gcgcaggcgg ccagcatgac ctcgcagatg ccgtcgatca aaccggattc ttccgccacc
     1201 ggaatgaact cgccgggggc gaccatgccc agttccggac tcttccaccg caccagcgct
     1261 tccatgccca ccaccgcgcc gttggccagg tcgacctgcg gctggaaata ggggatgaac
     1321 tcgccatgct ccagcgcccg gcgcaggcgg ttctgcagcg acagggtctt ggccgcgcgc
     1381 gagctcatgt ccttcgagaa cacctgcagg ctgccggggc cttgggcctt ggcgcgttcc
     1441 agcgccgctt ccgcgttctt gatcagggtc tcggcgtcct cgccgtcgcg cgggaacatg
     1501 gccagcccgc acgaggccga gacctcgaat tcctcgccac ccaccgagac cgtggtctgg
     1561 gccaggcggt gcagttgttc cgccgcctcc tggatctctc gcttggcgcc gatgccggtg
     1621 atcagcagca ggaagcggtc gccctgggcg cgcgccatga cgtcgccttg gcccagggcg
     1681 gcttgcagga tgtcggcggc ggcgatcagc acctggtcgc cgacgg
//
LOCUS       DATIKR010000107         1698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86378, whole genome shotgun sequence.
ACCESSION   DATIKR010000107 DATIKR010000000
VERSION     DATIKR010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86378"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VLL76_01670"
     CDS             <1..542
                     /locus_tag="VLL76_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV28226.1"
                     /translation="GTLVQIRRVLKPDGLFLGAMLGGETLKELRKALTDAEIAEEGGL
                     SPRVSPMADVRDLGRLLQRAGFALPVTDADSVTVSYGDPMRLLADLRGMGETNAVAEQ
                     RKGLTRRATLLHALSRYAELYAGPDGRMPATFQVLTMTAWKPHPSQQQPLKPGTAMHS
                     LAEALGDETCDLPKPPNDY"
     gene            545..1258
                     /gene="sfsA"
                     /locus_tag="VLL76_01675"
     CDS             545..1258
                     /gene="sfsA"
                     /locus_tag="VLL76_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HSV28227.1"
                     /translation="MKFPNALVRGSLIRRYKRFLADVELETGEVVTVHVANSGAMLGT
                     SAPGLEVWLSPATNPGRKLKWSWELCRVDGCLVGVNTAHPNGIAAEAITAGLIPELAG
                     YETIRREVKYGRNSRIDLLLEAPGRPTCYVEVKNVHLKRGDWAEFPDAVTVRGAKHLA
                     ELRDMVAAGCRSVMLYLVQREDCTGFRPAADIDPTYADGLAAAMRDGVEAICYTCRLS
                     VEDITIGQRLPIAVAGCQG"
     gene            1265..>1698
                     /locus_tag="VLL76_01680"
     CDS             1265..>1698
                     /locus_tag="VLL76_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV28228.1"
                     /translation="MDREDKESGRIPLHGPEDFEGMRKAGRLAAETLDFIAPHVVPGV
                     TTAELDRLCAEFIAERGGISAPLNYRGFPKSICTSVNHVVCHGIPGEKKLDDGDIVNI
                     DVTPIVDGWHGDSSRMYYVGKVGVKARKLVEVTYEALMRGLEV"
BASE COUNT          288 a          592 c          569 g          249 t
ORIGIN      
        1 cgggcacgct ggtgcagatc cgccgggtgc tcaagcccga cggtctgttc ctgggcgcca
       61 tgctgggagg cgagaccctg aaggaactgc gcaaggcgct gaccgacgcg gaaatcgccg
      121 aggaaggcgg tctcagcccg cgcgtgtcgc ccatggccga cgtccgcgac ctgggccggc
      181 tgctgcagcg ggccggcttc gccctgccgg tcaccgatgc cgattccgtc accgtcagct
      241 acggcgatcc catgcgactg ctggccgatc tgcgcggcat gggcgagacc aacgcggtgg
      301 ccgagcagcg caagggcctc acccgccgcg ccaccctgct gcacgccctg tcgcgctatg
      361 ccgagctgta cgccggcccc gacggccgca tgcccgccac cttccaggtg ctgaccatga
      421 ccgcctggaa gccccatccc agccagcagc agccgttgaa gccgggcacg gcgatgcatt
      481 cgctggccga ggcgttgggc gacgaaacct gcgacttgcc gaagccgccc aacgactact
      541 gaccgtgaaa ttccccaacg ccctggtgcg cggcagcctc attcgccgct acaagcgatt
      601 cctcgccgac gtggaactgg aaaccggcga ggtggtgacc gtccacgtcg ccaattcggg
      661 cgccatgctg ggtaccagcg cgccggggct ggaggtgtgg ctgtcgcccg ccaccaaccc
      721 cgggcgcaag ctgaaatgga gctgggaatt gtgccgggtt gacggctgcc tggtcggcgt
      781 caacaccgcg caccccaacg gcatcgccgc cgaggccatc accgccggcc tgatccccga
      841 gctggcgggc tatgagacca tccgccgcga ggtcaaatac ggccgcaatt cccgcatcga
      901 tctgttgctt gaggcgccgg gccggcccac atgctacgtg gaggtcaaga acgtccacct
      961 caagcggggc gactgggccg aattccccga cgccgtcacc gtgcgcggcg ccaagcatct
     1021 ggccgagctg cgcgacatgg tggccgcggg gtgccgctcg gtcatgctgt acctggtcca
     1081 gcgcgaggat tgcaccggct tccgcccggc ggcggacatc gacccgacct atgcggacgg
     1141 cttggccgcc gccatgcgcg acggcgtgga agcgatctgc tatacgtgca ggctgagcgt
     1201 cgaggatatc accatcggac agaggctgcc catcgcggtg gccggctgtc agggctagag
     1261 gaacatggac agggaagaca aggaatcggg ccgcatcccc cttcacggac ccgaggattt
     1321 cgaaggcatg cgcaaggccg gccggctggc cgccgagacg ctggacttca tcgcgccgca
     1381 tgtggtgccc ggcgtcacca ccgccgagct ggaccgcctg tgcgccgagt tcatcgccga
     1441 acgcggcggc atctcggcgc cgctgaacta tcgcggcttc cccaagtcca tctgcacgtc
     1501 ggtcaaccac gtggtctgcc acggcattcc cggcgagaag aagctggacg acggcgacat
     1561 cgtcaacatc gacgtcaccc ccatcgtcga tggctggcac ggcgacagct cgcgcatgta
     1621 ttacgtcggc aaggtgggcg tgaaggccag gaagctggtc gaggtcacct acgaggcgct
     1681 gatgcgcggc ctcgaggt
//
LOCUS       DATIKR010000108         6270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195235, whole genome shotgun sequence.
ACCESSION   DATIKR010000108 DATIKR010000000
VERSION     DATIKR010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 6270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6270
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195235"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>6270)
                     /locus_tag="VLL76_01685"
     CDS             complement(<1..>6270)
                     /locus_tag="VLL76_01685"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tandem-95 repeat protein"
                     /protein_id="HSV28229.1"
                     /translation="DGGAGDDAAVFGGSVGDYDVDLSGMVALVTNRLTGETDTVAGIE
                     ELRFDDGSFMVSLGGDNVPVAVEDGFVLAEDTQLVIDPADLIANDADFDGDAISLTSV
                     GGASHGTVQLRDDGKVVFTPDPEFSGQAGFSYTVTDATGRTSTASARVDVYATNDAPV
                     ALADAATVAEDGSVVLRVLDNDSDVDGDPLSVIAFNAVSANGGTVAKRSDGALVYTPK
                     ADFSGTDTFTYTMSDGRGGRATATATVTVTPVNDAPTAGADAFTTAEDTALVLTPGQL
                     LGNDADVDGDTLAIAGTANATGGTVAVNSSGNLVFTPESNFNGEAGFDYTVADGNGGS
                     VSQHVTVNVSSVNDAPVAGSDYLTTVQNAPVVVSKAQLLANDTDADGDALSIASHGGA
                     TGGTVSADSEGNLVFTPNAGFVGQGGFSYTVSDGKGGTATQTVSVRVNPINIGTPSLV
                     GAGEFRVNTTTADTQQYPAVTVLKSGGFVATWQSANTDGSGWGIYAQRFDAAGAPVGG
                     QFRVNGTVASDQFEPAVTALAGGGFVVAWDSMNQDGSYDGIYAQRFDANGNTQGGEFR
                     VNTTTWARQQAVALTALNDGSFVATWHGYVGDGSSYNVYAQRYSAAGAPLGGEFRVNT
                     YGTSDQAMPAVAALSTGGFVVTWASYNQDTSLYGIYAQRYDVNGNKVGGELAVNTFVA
                     NDQWAPVVTGLSDGRFVIAWNSWGQTGTYGYADVYMQMYDGGGNRIGSETMVNQSIWG
                     SQGEPSVATLADGGFVVTYHNSGSGWFNVSARRYDASGTPVGGEMTVNTDFTGNHYYP
                     SVAARPDGSFVTVWNGSGSGDADGIFGRVLAPNYAPVTQGDSFQTAEDTAIVIAASKL
                     LINDVDPDGDAMSLLRVRSGTNGTASLDAAGNVVFTPRANFNGTATFYYDVRDSWGLV
                     KTERVDVTVTPVNDAPTAAARSFTATEDQPLSGTLAGAGSDVDGDALTFQAGTVASQA
                     GGSVAVNADGTFTYTPAANFNGTDRFTYTVADGKGGSATGTVTLTVGAVNDAPVAVAD
                     SYDAVGNHALAVDAAHGVLANDTDVDGNPRTVSRWQQTTAKGGTISMAADGSFTYSPP
                     ANYSGADSFTYWVTDGQGAEHSAVVQLAVAPDPAGTQAESDSYQATEDTALTVAAARG
                     VLANDVDPQGDALGVTRFDAASAHGGTVAVNADGSFTYRPAADFAGIDSFTYDAGDGN
                     SGTVTATVTITVAGVNDGPVAADDRFATDEGTPLEVAAGSGVLANDSDVDGDVLSVID
                     ADAVSEHGGSVVMNADGSFTYTPAAHFSGIDHFRYVVSDGQGGSAWATAEVTVARGPH
                     TPQASADQYASDEDAVLSVSAADGVLANDRDPDGDALSVVAHDQVTANGGIVTMRADG
                     GFSYIPALDFHGVDSFNYTVSDAAGNRTTATVSITVAPVDEVDDASNRRLQAFNDYHQ
                     VAEDGELSVAVDRGVIGLKNRDADGNLVTVTDYEAVGSAGGSLVMNADGSFVYTPTAD
                     FNGAETFSYTIGNGRGATASASISVTVTPTNDAPEAVADAASGTEDAVLVLTAAELVG
                     NDADIDGDTLALEWVGDAVHGTVALGSDGNAVFTPQADYHGAASFSYRVTDGQGGSAA
                     ATVTLDIAPANDAPVAGADSLQATEDAPATFTAAQLLGNDADPDGDALSLLGVGDAVN
                     GTVDMVDGQVVFTPDADFNGTAGFDYTVGDGHGGTATARATVQVAAANDAPVASADSA
                     SATEDAPLVISAARLLGNDVDPDGDALTLVGVGGAVNGSVTLNAAGDVVFTPSADYHG
                     AASFTYTVRDALGATSTATVQVDVAAVNDAPTVLGETVEGREDTALALTASQLLANDG
                     DIDGDALSIIAVGNARNGQVAFGTGGPITFTPDRDFHGTGSFDYVVGDGKGGVRIATA
                     TVAVASVNDAPTAAADSVTAQEDTSLVLAPAALLGNDRDPEGQALSIVSVGAARNGTV
                     IRDAQGNVIFTPNADFNGVAAFEYVATDGAGGETVGTVSVAVTAVQDAPVVAGPLTAA
                     TSETAPFTADLLAGASDVDASDTLAVTGLVQTGGRAAAFTQVGNSISLDPAQFTDLAV
                     GEQLTLTFGYGVSDG"
BASE COUNT          877 a         2084 c         2289 g         1020 t
ORIGIN      
        1 tggccgtcgc tgacgccgta gccgaaggtc aaggtcaact gctcgcccac cgccaggtcg
       61 gtgaactgcg ccgggtcgag gctgatggaa ttgccgacct gggtgaacgc cgccgcccgg
      121 ccgccggtct gcaccagccc ggtcaccgcc agggtgtccg aggcatccac atccgaggcg
      181 ccggccagca aatcggcggt gaagggcgcg gtctcggagg tcgcggccgt cagcggccca
      241 gcgaccacgg gggcatcctg gacggctgtg accgccaccg aaacggtgcc gacggtctcg
      301 ccgcccgcgc cgtcggtggc cacgtattcg aacgcggcca caccgttgaa gtcggcgttg
      361 ggggtgaaga tgacgttacc ctgggcgtcg cggatgaccg tgccgttgcg agcagcgccc
      421 accgacacga tcgacagcgc ctgcccctcg gggtcgcggt cgttgccgag gagcgcggcc
      481 ggcgcgagga cgaggctggt gtcctcttgc gccgtaacgc tgtcggcagc ggccgttgga
      541 gcatcgttga ccgaggccac ggccaccgtg gcggtggcga tcctgactcc gcccttcccg
      601 tcgccgacaa cgtaatcgaa gctgcccgtg ccatggaagt cgcggtcggg ggtgaaggtg
      661 atcggaccac ccgtgccgaa ggccacctgg ccgttgcggg cgttgcccac ggcgatgatc
      721 gacagcgcgt caccgtcgat gtcgccgtca tttgccaaca actggcttgc ggtcagggcc
      781 agggcggtgt cctcgcggcc ctcgaccgtc tcgccgagca cggtcggcgc atcgttgacc
      841 gcggcgacgt ccacctgaac ggtggcggtc gaggtcgcgc ccaaggcgtc gcgcacggtg
      901 taggtgaacg aggcggcccc gtggtaatcg gccgacgggg tgaagacgac gtcgccggcc
      961 gcattcagcg tcacgcttcc gttgaccgcc cctccgacgc ccaccagcgt gagggcgtcg
     1021 ccgtcgggat cgacgtcgtt gccgagcagg cgcgcggcac tgatgaccag cggggcgtcc
     1081 tcggtggccg aggcgctgtc ggcgctggcc acgggcgcat cgttggccgc ggcgacctgg
     1141 accgtggcgc gcgcggtggc cgtgccgcca tggccgtcgc ccacggtgta gtcgaagccg
     1201 gccgtgccgt tgaagtcggc gtcgggggtg aacaccacct gcccatcgac catgtccacc
     1261 gtgccgttga cggcgtcgcc gacgccaagc agcgacagcg cgtcgccatc cgggtcggcg
     1321 tcgttgccca gcaactgggc ggcggtgaag gtggcgggcg catcctcggt cgcctgcagg
     1381 ctgtcggccc ccgcgaccgg agcgtcgttg gcaggggcga tgtcgagggt gactgtggcg
     1441 gccgcgctgc cgccctggcc gtcggtgacc cggtacgaga agctggcggc gccgtgatag
     1501 tccgcctggg gagtgaacac cgcgttgccg tcggaaccga gggccacggt accgtggacg
     1561 gcatccccca cccattccag ggccagcgtg tcaccatcga tgtccgcatc gttgccgacc
     1621 agttcggcgg ccgtgagcac caggacggca tcctcggtgc cggacgccgc gtcggcgacc
     1681 gcttcggggg cgtcgttggt cggggtcacc gtgaccgaga tgctggccga ggcggtggcg
     1741 cccctgccgt tgccgatggt gtaggagaac gtctccgcgc cgttgaaatc ggccgtcggg
     1801 gtatagacga agctgccgtc ggcgttcatg accaggctgc cgccggccga gccgaccgcc
     1861 tcgtagtcgg tcacggtcac caggttgccg tcggcgtccc tgttcttgag cccgatcacg
     1921 ccccggtcga cggccaccga aagctcgccg tcctctgcca cctggtgata gtcgttgaag
     1981 gcctgcaggc ggcggttcga ggcgtcgtcg acctcatcga cgggggcgac cgtgatgctg
     2041 accgtcgcgg tggtgcggtt gccggccgcg tcgctgaccg tatagttgaa actgtcgacg
     2101 ccgtggaagt cgagcgccgg gatgtagctg aagccgccgt cggcacgcat ggtcacgatg
     2161 ccgccgttgg cggtgacctg gtcatgggcg accaccgaca gggcgtcgcc gtccgggtcc
     2221 ctgtcgttgg cgagcacgcc atccgccgcg ctcaccgaca gaaccgcgtc ctcgtcgctg
     2281 gcgtattggt cggcggaggc ctgtggcgtg tgtgggccgc gcgccacggt gacctcggcc
     2341 gtggcccagg cgctgccgcc ctgcccgtcc gacaccacgt agcggaagtg gtcgatgccc
     2401 gagaaatgag ccgccggggt gtaggtgaag ctgccgtccg cgttcatcac cacgctgccg
     2461 ccgtgttcgc tgacggcatc ggcgtcgatg acagagagga cgtcgccatc cacgtccgaa
     2521 tcattggcca gcacgccgct tccggccgcc acctcaaggg gcgtcccttc gtcggtggcg
     2581 aagcggtcgt cggccgccac cggcccgtcg ttgacgccgg ccacggtgat ggtcaccgtc
     2641 gcggtgacgg tgccgctgtt gccgtcgccg gcgtcgtagg tgaagctgtc gatgccggcg
     2701 aagtcggccg cgggcctata ggtgaagctg ccgtcggcat tgacggcgac cgtgccgcca
     2761 tgggcgctgg ccgcgtcgaa gcgggtgacc cccagcgcgt cgccctgggg atcgacgtcg
     2821 ttggccagca ccccccgggc ggcggcgacc gtcagcgccg tgtcctcggt cgcctgatag
     2881 gaatcggact ccgcctgcgt gcccgccggg tcgggcgcga ccgcgagctg aaccacggcc
     2941 gaatgctcgg ccccctgccc gtcggtaacc caatacgtga aggaatccgc tcccgaatag
     3001 ttggccggcg gcgaataggt gaaggagccg tcggcggcca tgctgatcgt gccgcccttg
     3061 gcggtggtct gctgccagcg gctgaccgtg cgcgggttgc cgtcgacgtc ggtgtcgttg
     3121 gcgagcacgc cgtgggcggc gtccaccgcc agggcgtggt tgcccaccgc atcgtaggag
     3181 tcggcgacgg ccaccggtgc gtcgttgacc gcccccacgg tcagggtgac ggtgccggtg
     3241 gcgctgccgc ccttgccgtc ggccaccgtg taggtgaagc ggtcggtgcc gttgaagttg
     3301 gccgccggcg tgtaggtgaa ggtgccgtct gcgttgaccg cgacgctgcc gccagcctgc
     3361 gaggcgacgg tgccggcctg gaaggtcagc gcgtcgccgt ccacgtccga gccggcgccg
     3421 gccagcgtgc cggacaaggg ctggtcctcg gtggcggtga aggaccgcgc ggcggcggtc
     3481 ggggcgtcgt tcaccggggt gacggtgaca tcgacccgct cggtcttcac cagaccccac
     3541 gagtcgcgga cgtcgtaata gaaggtggcg gtgccgttga agttcgccct gggggtgaac
     3601 accacgttgc cggccgcgtc gaggctggcc gtgccgttgg tgccgctgcg aacccgcagc
     3661 agcgacatag cgtcgccgtc gggatccacg tcgttgatca gcagtttgga cgcggcaatg
     3721 acgatggccg tgtcttcggc ggtctggaag ctgtcgccct gggtcaccgg cgcgtagttg
     3781 ggggccagca cccggccgaa gatgccgtcg gcgtcgccgc tgccgctgcc gttccacacg
     3841 gtgacgaagc tgccgtccgg ccgcgccgcg accgacggat aatagtggtt gccggtgaag
     3901 tcggtgttga cggtcatctc gccgccgacc ggagttccgc tggcgtcgta gcgacgggcc
     3961 gagacgttga accacccgct gccgctgttg tgatacgtca ccacgaagcc gccgtcggcc
     4021 agcgtcgcca ctgagggctc gccctggctg ccccagatgg actggttgac catggtctcg
     4081 ctgccgatgc ggttgccgcc gccgtcgtac atctgcatgt agacgtcggc gtagccgtat
     4141 gtccccgtct ggccccacga gttccacgcg atcacgaacc ggccgtcgga caggccggtg
     4201 acgacaggcg cccactggtc gttggcaacg aaggtgttga ccgccagttc gccgccgacc
     4261 ttgttgccgt tgacgtcgta acgctgggcg tagatgccgt aaaggctggt gtcctggttg
     4321 taggacgccc aggtgacgac gaagccgccg gtggacagcg ccgccacggc gggcatcgcc
     4381 tgatcgctgg tgccataggt gttgacgcgg aactcgccgc ccaggggcgc gccggccgcc
     4441 gaatagcgtt gggcgtagac gttgtagctg gaaccgtcac cgacatagcc gtgccaggtg
     4501 gcgacgaagc tgccgtcgtt gagcgccgtg agcgccaccg cctgttggcg ggcccaagtg
     4561 gtcgtgttga cgcggaattc gccgccctgg gtgttcccgt tggcgtcgaa ccgctgcgcg
     4621 tagatgccgt cgtacgagcc gtcctggttc atggaatccc aggcgaccac gaacccgccg
     4681 ccggccaggg cggtgacggc gggctcgaac tggtcggagg ccacggtgcc gttgacgcgg
     4741 aactggccgc ccacgggcgc accggccgcg tcgaagcgct gggcatagat gccccagccg
     4801 ctgccgtcgg tgttggccga ttgccaggtg gcgacgaagc cccccgactt gagcaccgtg
     4861 acggcgggat attgctgggt gtcggcggtg gtggtgttga cgcggaactc gccggccccc
     4921 accaacgaag gcgtgccgat gttgatcggg ttgacgcgca ccgaaacggt ctgggtggcg
     4981 gtgccgccct tgccgtcgct gacggtatag gagaagccgc cctggccgac gaatcccgca
     5041 ttgggcgtga acacaaggtt cccctcggaa tcggcggaga cggtgccgcc ggtggcgccg
     5101 ccatggcttg cgatcgacag ggcgtcgccg tcggcatcgg tgtcgttggc aagcagttgc
     5161 gccttcgaca ccaccaccgg ggcgttctgc accgtggtca ggtaatcgga acccgcgaca
     5221 ggcgcgtcgt tgaccgagct gacgttgacg gtgacatgct ggctgacgct gccgccgttt
     5281 ccgtccgcca cggtgtagtc gaagccggcc tcgccgttga aattgctctc gggcgtgaac
     5341 accagattgc cggaggaatt gacggcgacg gtgccgcctg tggcgttcgc ggtgccggcg
     5401 atcgccaggg tgtcgccatc gacgtcggcg tcgttgccaa gcagttgccc gggggtcagg
     5461 accagcgcgg tgtcctcggc cgtggtgaac gcgtcggcgc cggcggtcgg cgcgtcgttg
     5521 accggggtga ccgtcacggt cgcggttgcg gtcgcccgcc cgccgcgccc gtcggacatc
     5581 gtgtaggtga aggtgtcggt gccgctgaaa tcggccttgg gggtgtagac cagcgcaccg
     5641 tcggaccgct tggcgaccgt gccgccattg gccgagacgg cgttgaaggc gatgaccgaa
     5701 agcgggtcgc catcgacgtc ggaatcgttg tcgagcacgc gcaggacgac cgagccgtcc
     5761 tcggcgacgg tggccgcgtc ggcaagcgcc accggcgcgt cgttcgtcgc atagacgtcg
     5821 acacgggccg aggcggtcga cgtccgtccc gtcgcgtcgg tgacggtgta gctgaatccg
     5881 gcttggcccg agaattcggg atccggggtg aagacgacct tgccatcgtc acgcaattgg
     5941 accgtgccgt ggctggcacc gcccaccgag gtcagggaga tggcgtcgcc gtcgaaatcg
     6001 gcgtcgttgg cgatcaggtc ggccggatca atgaccagtt gggtgtcctc ggccagcacg
     6061 aagccgtcct cgacggccac cggcacgttg tcgccgccca ggctgaccat gaacgagccg
     6121 tcgtcgaagc gcagttcctc gatgccggcc accgtgtcgg tttcgccggt gaggcggttg
     6181 gtgaccaagg ccaccatacc ggacagatcg acatcgtaat cgccgacgct gccgccgaac
     6241 accgccgcgt cgtcgcccgc gccgccatcg
//
LOCUS       DATIKR010000109         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_147160, whole genome shotgun sequence.
ACCESSION   DATIKR010000109 DATIKR010000000
VERSION     DATIKR010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147160"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VLL76_01690"
     CDS             complement(<1..317)
                     /locus_tag="VLL76_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28230.1"
                     /translation="MTVPTTHDPLIVVVEDEAIVLAGYQMLFESWGFRVVAAPSAADA
                     LSQLKDLGEPPRFILADYRLKDGHTGTEAIATLRRLYGDDIPGVLVTGDTAVDRLRTA
                     AASG"
     gene            585..1574
                     /gene="nadA"
                     /locus_tag="VLL76_01695"
     CDS             585..1574
                     /gene="nadA"
                     /locus_tag="VLL76_01695"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HSV28231.1"
                     /translation="MTEADIDPTLDLEAEIDRLRREKNAIILAHYYQDGEIQDLADFV
                     GDSLDLSRKAAATDADMIVFCGVRFMGEVAKILSPTKIVVIPDAEAGCSLEDSCKPDA
                     FRAFREKHPDHVAVTYINCSAEVKALSDVIVTSSNAETIVNQLPADKPIVFAPDRHLG
                     AYIARKTGRDMTLWPGSCIIHEQFSEKELIKLKVRHPNALVAAHPECPEAILTHADHV
                     GSTRGILDYVLKTDAKEFIIATEPHIIHQMQKAAPDKVFIPAPGADGGCSCSDCPFMA
                     KNTLEKIYLAMVNAAPAIEIPEELRVQAKKPLDRMLEMSVSVPMSSGATGNAA"
BASE COUNT          318 a          599 c          544 g          273 t
ORIGIN      
        1 cccgaggcgg cggcggtgcg caggcggtcg acggcggtgt cgccggtgac cagcacgccc
       61 gggatgtcgt cgccgtacag gcggcgcagg gtggcgatgg cctcggtgcc ggtatggccg
      121 tccttgaggc ggtaatcggc caggatgaag cgcggcggct cgcccaggtc cttgagctgc
      181 gacagggcgt cggccgccga cggcgccgcc accacgcgaa agccccagct ctcgaacagc
      241 atctggtacc cggccaagac gatggcctcg tcctcgacga cgacgatcag cgggtcatgg
      301 gtggtcggta cggtcatatt cctcggccag attgccttcc cgcctggata atggggcatc
      361 gcacaaggag agggaactcc tccgattgtc atacaccccc tatatcatga ggcggtggtg
      421 ccgcgtgggg gcgcggaatc tctgccccgg cgccgtcacc agttgcctta cggcgcgaaa
      481 tgcgccttaa cttcatgctt cacgcatgcg gggcccgggc ggccccggaa caagggccaa
      541 gaagttccat gacagatacc gtcgtcctgc cgaagccgaa cgccatgacc gaggccgaca
      601 tcgacccgac cctcgacctc gaggccgaga tcgaccgtct gcgccgcgag aagaacgcca
      661 tcatcctggc ccattactac caggacggcg agatccagga tctggccgat ttcgtcggcg
      721 attcgctgga cctgtcgcgc aaggccgctg ccaccgacgc cgacatgatc gtgttctgcg
      781 gcgtgcgctt catgggcgag gtcgccaaga tcctgtcacc caccaagatt gtggtgatcc
      841 ccgacgccga ggccggctgc tcgctcgagg attcgtgcaa gcccgacgcc ttccgcgcct
      901 tccgcgagaa gcaccccgac cacgtggcgg tcacctacat caactgctcg gccgaggtca
      961 aagcgctgtc ggacgtgatc gtgacctcgt ccaatgccga gaccatcgtc aaccagttgc
     1021 ccgccgacaa gcccatcgtg ttcgcgcccg accgtcacct gggcgcctac atcgcgcgca
     1081 agaccggccg cgacatgacc ctgtggccgg gaagctgcat catccacgag cagttctcgg
     1141 aaaaggaact gatcaagctg aaggtgcgcc atcccaacgc cctggtggcg gcgcatcccg
     1201 aatgcccgga agcgatcctg acccatgccg accatgtcgg ctcgacccgc ggcatcctgg
     1261 attacgtgct gaagaccgat gccaaggaat tcatcatcgc caccgagccg cacatcatcc
     1321 accagatgca gaaggcggcg cccgacaagg tgttcattcc cgcccccggc gccgacggcg
     1381 gctgctcgtg ctcggattgc ccgttcatgg ccaagaacac cttggaaaag atctacctgg
     1441 ccatggtcaa cgccgccccg gccatcgaaa tccccgagga attgcgggtc caggccaaga
     1501 agccgctgga ccgcatgctg gagatgtcgg tgtcggtgcc catgtcgtcg ggagccaccg
     1561 gcaatgccgc gtaaggccgt gacattgccg gaactcgacc tcgccgacgc ccgccgcgtc
     1621 atcgaggcgg ccctggccga ggacgtcggt cccggcgaca tcacctcggc gacggtgatc
     1681 cccgagacgc tgcgcttcaa gggcgtcatg caggcccgcc acgccatggt ggtg
//
LOCUS       DATIKR010000110         2993 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_38150, whole genome shotgun sequence.
ACCESSION   DATIKR010000110 DATIKR010000000
VERSION     DATIKR010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38150"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(411..1433)
                     /locus_tag="VLL76_01700"
     CDS             complement(411..1433)
                     /locus_tag="VLL76_01700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28232.1"
                     /translation="MDDELKPIADSDMDSMFVLPLSIIPLETPALQSAKLIKNVRLKS
                     VIEIFSDDQTGSGQIEIESLPKMFNWEDGQLHPDHAILRRLALLPSYDVYSLRISLRE
                     HGIPVNDYSALKLSPDKAQELTKYMILFTRPLLKLIYADEAVNVETYDDLLRLFRDPD
                     IKKARQRLESMAKSLNVEIYEVPRFLEDYGDTFLSLSYFRHCLDRLEPYFTACVHGMG
                     PIRGHFQLKQNHNLMKTCDMVEDTINTISATITGRLEVFEKRTREMWNNISQEEFRAV
                     KTMIERYHVTIGAALCGLTVKMNSFAKSFPRPNAGGPIKRADFLMTELVQGIELIRDV
                     EKRNAL"
     gene            1535..2533
                     /locus_tag="VLL76_01705"
     CDS             1535..2533
                     /locus_tag="VLL76_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV28233.1"
                     /translation="MQKLKGFAVMALLMLAATAAAQDIRFFQIGTGPTGETRFPVGGL
                     IANALSNPPGSRQCDKGGSCGVPGLVAVAKSTGGSLANIEAIAAGRLDAALVQADIAY
                     WAFHGTGIYQGKGAVKNLRGIAVLYPESMHLVARRGADIRSVADLRGKRVSFGDKRSG
                     VRVHGLMLLKAFGLSEHQVKLRDLPPGPAADALAKNELDAMLVIDGHPIPAVAELART
                     TPITLVPLEGPQVDRLRAQHPFLSAGEIPAATYADVPEAVKTLDVGMALVTGAEQPHD
                     LIYGITRALWHKSTLALLQGFPRGNLIRPDADAILKAGIPLHGGAAGYYFDAGITQ"
     gene            complement(2541..2780)
                     /locus_tag="VLL76_01710"
     CDS             complement(2541..2780)
                     /locus_tag="VLL76_01710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28234.1"
                     /translation="MSLFGRRARGADVAPGDIFRKAGTYGGEWVVERVFEYPDIPRHV
                     RLVERQGARAMTVAATMLFDTECFTPVSQGMAEPA"
BASE COUNT          526 a          984 c          966 g          517 t
ORIGIN      
        1 agccgccata gacgatgccg tggctccagc cgcgccgccc gaacaccagc ccgaccaggg
       61 ccagcaaggg caaggcgcac agcgcgattg cgatcatggg ttcacccggg ccgcacggcc
      121 gggcgtgaga aacagacgca aagacccctc caccccgatg gggtaatcag ccggccccgc
      181 gttttgcggc tttatcgttg attattggcg tcgccttgcg cgaccggggc agacgaatcg
      241 tatgctaccg ggatgggcaa agacaagagc ggtcactgac caactaaagg ataggaggat
      301 cgatgtcggc atgcatccgt cctgacgcac gcacggcagc caccccggct gaaagatcct
      361 tcggctgcgc ccacggcttc cgtaatgggc cgttgggagt caagtccccc ctaaagcgcg
      421 ttgcgctttt ccacgtcgcg gatcagttcg atgccctgga ccagttcggt catcaggaag
      481 tcggcgcgct tgatcgggcc gccggcgttg gggcggggga agcttttcgc gaacgagttc
      541 atcttcacgg tcaggccgca cagcgccgcg ccgatggtga cgtggtagcg ctcgatcatg
      601 gtcttcaccg cccggaactc ttcctggctg atgttgttcc acatttcgcg ggtgcgcttc
      661 tcgaacacct ccagccggcc ggtgatggtg gccgagatgg tgttgatggt gtcctcgacc
      721 atgtcgcagg tcttcatcag attgtggttc tgcttgagct ggaaatggcc gcggatcggc
      781 cccatgccat ggacgcaggc ggtgaaatag ggctccaggc ggtcgaggca gtgccggaaa
      841 taggacagcg acaggaaggt gtcgccgtaa tcctcgagga agcgcggcac ctcatagatc
      901 tcgacgttca ggcttttcgc catggattcc aggcgctggc gcgccttctt gatgtcaggg
      961 tcgcggaaca ggcgcagcag gtcgtcatag gtttcgacgt tcaccgcctc gtcggcatag
     1021 atcagcttca acagcggccg ggtgaacagg atcatgtact tggtcagctc ctgcgccttg
     1081 tcgggcgaca gcttgagcgc cgaatagtcg ttcaccggga tgccgtgctc gcgcaggctg
     1141 atgcgcaggg aatagacgtc gtagctgggc agcagcgcca ggcggcgcag gatggcgtgg
     1201 tcgggatgaa gctggccgtc ttcccaattg aacatcttgg gcagagactc gatctcgatc
     1261 tggcccgaac cggtctggtc gtccgaaaag atctcgatga cgcttttgag ccgaacgttc
     1321 ttgatcagct tcgcgctttg cagcgccggc gtctccaacg gaatgatcga cagcggcagc
     1381 acgaacatgg aatccatgtc gctgtcggca atcggcttaa gttcgtcgtc catccgtgcc
     1441 agccattcgt cgtccccggg cggcatattg cctgttttcg tgcgattgcg aaatgccgaa
     1501 gatgcaagca cttgcgcagc gaggcggatc cgacatgcaa aaattgaaag gcttcgccgt
     1561 gatggcgctg ctgatgctgg cggcaacggc cgccgcccag gacatccgct tcttccagat
     1621 cggcaccggc ccgaccggcg aaacccgctt cccggtcggc ggcctgatcg ccaatgcgct
     1681 gtcgaacccg cccggctcgc gccaatgcga caagggcggc agttgcggcg tgccggggct
     1741 ggtggcggtg gcgaagtcca ccggcggctc gctcgccaac atcgaggcca tcgccgccgg
     1801 ccggctcgac gccgcactgg tccaggccga catcgcctat tgggccttcc acggcaccgg
     1861 catctatcaa ggcaagggcg cggtcaagaa cctgcgcggc atcgccgtgc tgtatcccga
     1921 aagcatgcat ctggtggcac ggcggggcgc cgacatccgc tcggtggccg accttcgcgg
     1981 caagcgcgtc agcttcggcg acaagcgctc gggcgtgcgg gtgcatggct tgatgctgct
     2041 gaaggcgttc gggctgtccg agcaccaggt caagctacgc gacctgccgc ccggcccggc
     2101 cgccgacgcc ctggccaaga acgagttgga cgccatgctg gtgatcgacg gccaccccat
     2161 cccggcggtg gccgaactgg cgcgcaccac gcccatcacc ctggtgccgc tggaagggcc
     2221 gcaggtggac cgcctgcgcg cccagcaccc gttcctgtcg gccggcgaaa tccccgccgc
     2281 cacctatgcc gacgtgcccg aggcggtgaa gacgctggac gtgggcatgg ccttggtcac
     2341 cggcgccgag cagccgcacg acctgatcta cggcatcacc cgcgccctgt ggcacaaatc
     2401 aaccttggcg ctgctgcaag gcttcccgcg cggcaacctg atccgccccg acgccgacgc
     2461 catcctgaaa gccggcatcc cgctgcatgg cggcgccgcc gggtattatt tcgacgccgg
     2521 catcacgcaa taagggcccg tcacgccggc tcggccatgc cctggctgac cggcgtgaag
     2581 cattccgtgt cgaacagcat ggtcgcggcc accgtcatgg cgcgggcgcc ctggcgctcg
     2641 accaggcgga catggcgcgg gatgtcgggg tattcgaaca cccgttccac cacccattcg
     2701 ccgccatagg tgccggcctt gcggaagatg tcgccgggag ccacgtcggc gccccgggcg
     2761 cgtcgaccga acagactcat gactgcctcc gaaagttgac ttgcccacac catggcccat
     2821 cccttggtgc cacggagagc cctagcatta gccgaggatc gcacgggttg tcgagtgcaa
     2881 cctatacccc gaacaggtcg ggagggtcgg ctttctccga tgcgcacagg tcggagacac
     2941 ccaccccgat caggcggaag gcgcggccgt cggcctcgcg ctccagcaac cct
//
LOCUS       DATIKR010000111         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_74451, whole genome shotgun sequence.
ACCESSION   DATIKR010000111 DATIKR010000000
VERSION     DATIKR010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74451"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..887
                     /locus_tag="VLL76_01715"
     CDS             96..887
                     /locus_tag="VLL76_01715"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSV28235.1"
                     /translation="MTNKVTALVLAGSRRGGDPLARAFEVPHKAALPVAGRPMGEWVV
                     DALRKSPRIGRIMMAADWRSLGPAVPLLTTQEKIVPVAAMPTIGETVDAVLDAVPPPV
                     LITTVDHPLLTPAMIDEFLDRVPPGADAAVAVARAETVLSAYPEARRTFVRFRRARVT
                     GCNLFLLATPRARSAVRFWSGLDSYRKDPGAMVAALGMGSVLLWWLGLLTLDGAAQRL
                     SRRVGANLAVVEMSSPEAAIDVDKPEDLRLADAILVRRGAYWANG"
     gene            complement(869..>1661)
                     /locus_tag="VLL76_01720"
     CDS             complement(869..>1661)
                     /locus_tag="VLL76_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007185933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HSV28236.1"
                     /translation="ILSAGQGRRLLPWTHDLPKCLLPFAGKSLLGWQLEALAANGVEE
                     AVVVTGFGAAAVEREIGRLAPSGLKTTALVNPFFGVADNIASVWLVRQQLVGDVVLLN
                     GDTLFEPRVLAKAVAEAERPVTVTVDTKESYDADDMKVQLLGDRVLRIGKTLTPEATG
                     AESIGMLVMKGLGGPLFAAAIETVIGQPGGVSRWYLSAVDELAAKGMVGAVSIAGLGW
                     TEVDYPGDLGRAEMLARGWVHQSRAAARQAEAAAEAPLLPYPLAQ"
BASE COUNT          230 a          577 c          609 g          245 t
ORIGIN      
        1 tggattctgg aagacaacct gcccatgcgg cggatggccg aggccttggg cggcacggtg
       61 tccaagacct ggcgcattta cgagaggcgg ctggcgtgac gaacaaggtg acggcattgg
      121 ttctggccgg ctcgcgccgg ggcggcgacc cgttggcccg cgccttcgag gtgccgcaca
      181 aggccgccct gccggtggcc ggccggccca tgggcgagtg ggtggtggac gcgctgcgca
      241 aaagcccgcg catcggccgc atcatgatgg ccgccgactg gcgcagcctg ggtccggcgg
      301 tgccgctgtt gaccacccag gaaaagatcg tgccggtggc ggcgatgccc accatcggcg
      361 agacggtcga cgcggtgctg gacgccgtgc cgccgccggt gctgatcacc acggtggacc
      421 atccgctgct gacgccggcc atgatcgacg agttcctcga ccgggtgccg cccggggccg
      481 acgcggccgt ggcggtggcg cgcgccgaaa cggtgctgtc cgcctatccc gaggcacgcc
      541 gtaccttcgt tcgtttccgc cgggcgcggg tgaccggctg caacctgttc ctgctggcga
      601 caccgcgcgc ccgctcggcg gtacggttct ggagcggcct ggattcctac cgcaaggacc
      661 cgggcgccat ggtggcggcc ttgggcatgg ggtcggtgct gctgtggtgg ctggggctgc
      721 tgaccctgga cggcgccgcc cagcgcctgt cgcgccgggt cggtgccaat ctggcggtgg
      781 tcgagatgag ctcgcccgag gcggcgatcg acgtggacaa gcccgaagac ctgcgcctcg
      841 ccgacgccat cctggtgcgc cgtggcgcct attgggccaa cggatagggc agcagcggcg
      901 cctcggccgc cgcttcggcc tggcgggcgg cggcgcggct ctggtgcacc cagccgcgcg
      961 ccagcatctc ggcgcggccg aggtcgccgg gataatccac ctcggtccag cccaggccgg
     1021 cgatggacac ggcgcccacc atgcccttgg ccgccaactc gtcgaccgcc gacaaatacc
     1081 agcgcgatac gcctccgggc tggccgatca ccgtctcgat ggcggcggcg aacagcgggc
     1141 cgcccaggcc cttcatcacc agcatgccga tggattcggc gccggtggcc tcgggcgtca
     1201 aggtcttgcc gatgcgcagc acgcggtcgc ccagcaactg caccttcatg tcgtcggcgt
     1261 cgtagctctc cttggtgtcc accgtcaccg tgacggggcg ctcggcctcg gccaccgcct
     1321 tggccaagac gcgcggctcg aacagggtgt cgccgttgag cagcacgacg tcgccgacca
     1381 attgctggcg caccagccac acgctggcga tgttgtcggc gacgccgaag aacgggttga
     1441 ccaaagcggt ggttttgagg ccggacgggg cgagccggcc gatctcgcgc tcgacggcgg
     1501 cggcgccgaa gccggtcacc accacggcct cctcgactcc gttggcggcc agggcttcca
     1561 gttgccagcc cagcagcgac ttgccggcga agggcagcag gcatttcgga aggtcgtggg
     1621 tccagggcaa cagccggcgg ccttggccgg cggaaaggat g
//
LOCUS       DATIKR010000112         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_74463, whole genome shotgun sequence.
ACCESSION   DATIKR010000112 DATIKR010000000
VERSION     DATIKR010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74463"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VLL76_01725"
     CDS             complement(<1..888)
                     /locus_tag="VLL76_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSV28237.1"
                     /translation="MKPSTILLVDDEPAFLRLAGAWLEKQGHRVVTAADAAQAREAFR
                     RERPDLVVLDLVMPPERTPEAGLSLVPDFAAVPVVVMTAHAEHELALRAVAAGAWDFL
                     AKPVEPDLLRFVVARALEKRRLEQDLARLREIPADDGIFGASPAIQRLKEMVRRVGPA
                     DLSVLVLGPSGTGKELVAHALHAASPRRSGPFVAVHCGAIPADLLESELFGHLRGSFT
                     GAHQDREGLIAAAHGGTLMLDEVGEMPQSMQVKLLRFLQEGTYTPVGGRQPRSADVRV
                     ISATHRDLEAMATEGQFRED"
     gene            complement(885..1223)
                     /locus_tag="VLL76_01730"
     CDS             complement(885..1223)
                     /locus_tag="VLL76_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28238.1"
                     /translation="MDTLTPEKPAPDLWGDVFDFLATGVIFLGWLQIVVLVISALVTA
                     AFMLSGKPMTLTVHGYWQVIPLILAFPFISVYAGRRLRKHARTSIPARVGIGGLGLIY
                     VALMINQALQ"
     gene            complement(1226..>2633)
                     /locus_tag="VLL76_01735"
     CDS             complement(1226..>2633)
                     /locus_tag="VLL76_01735"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV28239.1"
                     /translation="ARLAGQCGCLLTWPYAVGGTVTAAALANDPGSFLPWGGMTVFRY
                     EGPGLLAVGATLLLAVLGHWVLLGAWRKAEGKRRRQIGVVGASSTLGLGSVMGLAFPL
                     LGIDATPWPLLLLPLYLAVLAYGVLRYELMAANQWVRRALTGGLLMALAGLATALPTG
                     LVAAEAPWAVSALAVSAALALWGPVRRRVDRMVFPGGEVTAAELAGWRAALDQADDDE
                     DITRRADALLRDKLRVPQSDWADAPPGPRRVVEVMDGVRMEALRTLAARRAFADRQRL
                     AELGALAATVAHDLRNPMNIVAMAVADANPSIRTEVTTQLGRMEALVRDLLDYAKPWT
                     VTPTEVDITAAVAEVAWGTGVETDIPAGLTVHADPLRLSQALGNLLVNARTAGGRVMV
                     AAEKHEDGVRIHVCDDGPGIPEDIRDTLFQPFISRGPGGTGLGLAIVAKVMSAHGGTV
                     ELGRRPSWTTCLTLTFGA"
BASE COUNT          451 a          910 c          912 g          360 t
ORIGIN      
        1 atcttcacgg aattggcctt cggttgccat ggcctccagg tcgcggtggg tggccgagat
       61 cacgcggacg tcggccgacc ggggctggcg cccgcccacc ggcgtgtagg tgccttcctg
      121 gaggaagcgc agcagcttga cctgcatgga ttgcggcatt tcgccgacct cgtcgagcat
      181 caacgtacca ccgtgagcgg cggcgatcag tccttcgcgg tcctggtggg cgccggtgaa
      241 actgcctctc aaatggccga acagttcgct ttccaacagg tccgcgggaa tggcgccgca
      301 atggacggcg acgaacgggc cggagcggcg cgggctggcg gcgtgcaggg cgtgggcaac
      361 cagttccttg ccggtgccgc tggggcccag gaccaacacc gacaggtcgg ccgggccgac
      421 ccgccggacc atttccttaa ggcgctggat ggccgggctg gcgccgaaga tgccgtcgtc
      481 ggccgggatc tcgcgcagcc gcgccaggtc ctgctccagg cgccgctttt ccagcgcgcg
      541 ggcgaccacg aagcgcagca ggtcgggctc caccggcttg gcgaggaaat cccacgcccc
      601 ggccgccacc gctcgaagcg ccagctcgtg ctcggcatgg gcggtcatca ccaccaccgg
      661 cacggcggcg aagtcaggaa cgagcgacag gccggcctcg ggcgtgcgct cggggggcat
      721 caccaggtcg aggaccacga ggtctgggcg ctcgcgccgg aacgcttcac gcgcctgggc
      781 ggcgtcggcg gcggttacaa cccggtggcc ctgtttctcc agccaagcgc cggcaaggcg
      841 caggaaggcg ggctcgtcgt cgacgaggag gatggttgac ggtttcactg aagtgcctga
      901 ttgatcatca acgccacata aatcaggcca agaccaccaa tccccacacg cgccgggatc
      961 gacgtgcgag cgtgcttacg aagacgccgc ccggcgtaga cgctgatgaa cggaaatgcc
     1021 aggatcaaag ggatgacctg ccaataccca tgcactgtca gcgtcatggg cttccccgac
     1081 agcataaaag cggcggtgac gagagcggag attaccaaca cgacgatctg aagccagccg
     1141 agaaaaatga cgccggttgc tagaaaatcg aaaacgtcac cccacagatc gggggccggc
     1201 ttttcaggcg tcagcgtatc cattctcagg ctccgaacgt tagtgttaag cacgtcgtcc
     1261 aactgggccg ccggcccagt tcgaccgtgc cgccatgggc ggacatgacc ttggcgacga
     1321 tggcgaggcc caggccggtg ccgcccggcc cgcgtgagat gaagggctgg aacagggtgt
     1381 cccggatgtc ctcggggatg ccggggccgt cgtcgcagac atggatgcgc actccgtcct
     1441 cgtgcttctc ggcggccacc atcacccgcc caccggcggt ccgcgcgttg accagcaggt
     1501 tgccgagcgc ctgggatagc cgtaagggat cggcgtggac ggtcaggccg gcgggaatgt
     1561 cggtctccac acccgtgccc cacgcgacct cggcgacggc agcggtgatg tccacctcgg
     1621 tcggcgtcac cgtccatggc ttggcgtagt cgagcagatc gcgcaccagc gcctccatgc
     1681 ggcccagctg ggtcgtgacc tctgtccgta tggacgggtt ggcatcggcc accgccatgg
     1741 cgacgatgtt catggggttg cgcaggtcgt gggccacggt ggcggccagc gcccccagtt
     1801 cggcgaggcg ctgccggtcg gcgaaggcgc ggcgggcggc cagcgtgcgc agggcctcca
     1861 tccgcacacc gtccatgacc tcgacgaccc gccgggggcc gggtggggcg tcggcccaat
     1921 ctgattgggg gacgcgcagc ttgtcgcgca gcaaggcatc ggcgcggcgc gtgatgtcct
     1981 cgtcgtcatc ggcttggtcg agtgcggcgc gccatccggc cagttccgcg gccgtcacct
     2041 cgccgccggg gaaaaccatc cggtcgaccc ggcgccggac cggtccccac aaggcaagcg
     2101 cggcagagac cgccagcgcc gacaccgccc agggcgcctc ggcggcgacc agtcccgtcg
     2161 gcagggcggt cgccaagcca gccagcgcca tcagcagacc gccggtcaag gcccgccgaa
     2221 cccactggtt ggccgccatc agctcatagc gcagcacgcc ataggccagc accgcgaggt
     2281 agaggggaag cagcagcagc ggccagggag tggcgtcgat gccaagcagc gggaaggcca
     2341 gccccatgac cgacccgagg cccaatgtcg aggacgcgcc caccacgccg atctggcgcc
     2401 gccgcttgcc ttccgctttg cgccaggctc ccagcaggac ccagtgtccc aacaccgcca
     2461 gcagcaacgt ggcgcccacc gccagcagcc ccggcccttc gtagcggaac acggtcatcc
     2521 cgccccaggg caggaaggaa ccgggatcat tggccagggc cgccgcagtg acggttccgc
     2581 ccacggcgta cggccaggtc agcaggcagc cgcactggcc cgcgagacgg gcg
//
LOCUS       DATIKR010000113         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_182996, whole genome shotgun sequence.
ACCESSION   DATIKR010000113 DATIKR010000000
VERSION     DATIKR010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182996"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            359..1489
                     /locus_tag="VLL76_01740"
     CDS             359..1489
                     /locus_tag="VLL76_01740"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HSV28240.1"
                     /translation="MHGFGSFEPDERGRLCYLPAVPPFPKLEDVWGQLQRATKAVEEF
                     DRALAAFPVPDVVGKLFARLDAVHSSGAEGATTTFTDLLEYQSSLNRAKDPEDAREVA
                     ATAEAFDELSEHGGVSYIDTVLLIHRRLFERASDPMVAAGAGTLKHHPNGTYDPEAVG
                     ATFFYTAPASTAQALAAWDQFTAEADDRPELMRQALSHWWFEHIHPVPDGNGRVGRLL
                     VPLALRRKGTLGHACAFLGEAVHLNKNVYVDALKDARRTGEFSAWTRVFCSMVAQSAA
                     SNLERLEQLGQIYTGWLAATKSVRAHSVVHRLVPWIITKPTFTVRDALMQAAGSVTFQ
                     AMNTAIKRLIDLGIVTQLDGGGRDRLFTASEVIRLFDPVSLH"
     gene            complement(1520..>2278)
                     /locus_tag="VLL76_01745"
     CDS             complement(1520..>2278)
                     /locus_tag="VLL76_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV28241.1"
                     /translation="EQTSRQAGTVAQATDEASASVQSVASAAEELSASIAEIGRQVEQ
                     SSQVSHAASEEASRTNATIQGLAESSARIGDVVNLINDIASQTNLLALNATIEAARAG
                     EAGKGFAVVAGEVKSLANQTTRATDEIAAQVRAIQEETNSAVAEISEFVRAIEDVDGI
                     ARAVAGSMGQQDAATTEIAGSIQAAARGASEVSGQMSSLSDATAEAEASASRLFALAD
                     SLSRASEDLNGAVAGFLAEVRGGEHHALAATSRS"
BASE COUNT          365 a          733 c          747 g          433 t
ORIGIN      
        1 ttccaaccac agctgcaatg caggcgtagg cggatggcgg aacggccgtc atgggcgcaa
       61 accggtcagt gctggaggtc ggcagtgcgc ttcatgcatc tgggtctact ggtccataat
      121 ggacctcaat gcaccgtgca caccatggag cgggtggaga gcgcgggaaa agcctttgat
      181 gtcaggcggt tggttgggct ggaggattgc ccgaccggta tcaaaacagc caattccgac
      241 ctaacgaaaa caatgagtta ttggcaggcc gtggacggcc cctatgtggg ttcatccttg
      301 aacggcatgg ttggctgtta taggttgtgg cgagaaaact tgaacaagga ccctcgccat
      361 gcatggtttc ggcagcttcg aacccgacga gcggggacgg ctgtgttacc tgccggcggt
      421 cccgccgttt cccaagctcg aggacgtgtg gggtcaactt cagcgcgcca cgaaggcagt
      481 cgaggagttc gaccgggcgc tggccgcctt tccggttccc gacgtggtgg gcaagctgtt
      541 cgcccgcctg gacgcggtcc attcctctgg ggccgagggc gcgaccacga ccttcaccga
      601 cctgctggaa tatcaaagct cgctcaaccg cgccaaagac cccgaggatg cccgggaagt
      661 ggcggcgacg gccgaggcgt tcgatgagct gtcagaacac ggcggggtgt cttacatcga
      721 cactgtgctt ctcatccacc gccgcctgtt cgagcgggcg agcgacccca tggtcgccgc
      781 cggcgccggc acgctgaagc accaccccaa cggcacctac gatcccgagg cggtgggggc
      841 aacgttcttt tacacggccc cggcatcgac ggctcaggcg cttgcggcgt gggatcagtt
      901 cacagccgag gccgacgacc ggcccgaact gatgcgccag gcactgtctc actggtggtt
      961 cgagcacatc cacccggtgc ccgatggcaa cggccgcgtc ggccgcttgc tggtgccgct
     1021 tgccctgcgg cggaaaggca cgctgggcca tgcctgcgct ttcctgggcg aggcggtgca
     1081 tctgaacaag aacgtctacg tggatgcgct caaggacgcc cggcgcacgg gtgagttttc
     1141 cgcctggacg cgggtgtttt gctccatggt ggctcagagc gccgcatcta atctggagcg
     1201 tctggaacaa ctggggcaaa tctacaccgg ctggctggct gcgaccaagt ctgtgcgcgc
     1261 ccacagcgtt gtccaccggc tcgtcccgtg gatcatcacc aagccaacct ttaccgttcg
     1321 tgatgcacta atgcaggcgg ctggttcggt gacgttccag gccatgaata ccgccatcaa
     1381 gcgtctgatc gatctgggaa tcgtcaccca gttggacggc ggtgggcgcg atcgcctttt
     1441 cacggcttct gaagtgatcc gcctgtttga ccctgtcagc ctgcactaac gcagggctcc
     1501 gatttgcgcc cgtccgccat catgatctcg aagttgccgc gagagcatgg tgctcgccgc
     1561 cgcggacctc ggccaggaag ccggcgacgg ccccgtttag gtcttcggac gcgcgtgaca
     1621 ggctgtcggc cagggcgaac aggcggctgg cggacgcttc ggcctcggcg gtggcgtcgg
     1681 acaggcttga catctggccc gatacttccg atgcgcccct ggcggccgcc tggatgctgc
     1741 cggcgatttc ggtggtggcg gcgtcctgct gtcccatcga gccggcgacc gcgcgggcaa
     1801 tcccgtccac gtcctcgatg gcccggacga attcactgat ttcggccacg gcggaattgg
     1861 tttcctcctg gatggcgcgc acctgggcgg caatttcgtc ggtcgccctt gtggtctggt
     1921 tggccagcga cttgacctcg cccgcaacca ccgcgaaccc cttgccggcc tcgccggccc
     1981 gcgccgcctc gatggtggca ttgagggcca gcaggttggt ctggctggcg atgtcgttga
     2041 tgaggttgac gacgtcgccg atccgcgcgg aactttccgc cagtccctgg atggtggcgt
     2101 tggtgcggct cgcttcctcc gaggccgcat gggacacctg acttgactgc tcaacctgcc
     2161 ggccgatctc ggcgatcgag gccgacaact cctcggccgc cgacgcgacc gactgcacgc
     2221 ttgcggacgc ttcgtcggtc gcctgcgcca ccgttcccgc ctgccgcgag gtctgttc
//
LOCUS       DATIKR010000114         1885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_207444, whole genome shotgun sequence.
ACCESSION   DATIKR010000114 DATIKR010000000
VERSION     DATIKR010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207444"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1189
                     /locus_tag="VLL76_01750"
     CDS             <1..1189
                     /locus_tag="VLL76_01750"
                     /inference="COORDINATES: protein motif:HMM:NF021264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mitofilin family membrane protein"
                     /protein_id="HSV28242.1"
                     /translation="TAAAPTQAALMAALDDDRKAPNTGGSMTDCEHIKAPEPKADTPP
                     APEATPEAVGDDIEGKGVKWGALTGAVLVLVLLVGGVVTWPQWKDQVMPARVAAPQSA
                     TILAPNGGGEVEVLRADLDQTRERLRQLEARLAERAAAPVGGADLGPVENRLGQVEQS
                     LRTLQAQPQVPARLADDVAALGKQVGDLAKTSADAAAVLRLADRVEKVEAEMRDLQAR
                     RSSATALLLAVGQLREAVNNAMPYDAELRAVRVLAPEGGDTALALDALKARAAAGIPN
                     RLVLAQRFEALAPELVRAETLPSQRSWWRDTLHRLSTLVTLRREDGDAAGNSAAAIVA
                     RAEQRLEQGDLAAAAAEIEQLQGGAAEAARPWLEDARARAAADKSLSELTAHVVASFG
                     PRQ"
     gene            1192..>1885
                     /locus_tag="VLL76_01755"
     CDS             1192..>1885
                     /locus_tag="VLL76_01755"
                     /inference="COORDINATES: protein motif:HMM:NF018875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HSV28243.1"
                     /translation="MRRLIVFVAATALLVFASVWLADRPGEVTIHWQGWRLDTSVPVL
                     LLIILATVALLDIVGRMVRGVVTAPGRFFRARHDKRKREGYVALSDGLAAIAAGDSRQ
                     ARKLAKKADKLLEDRSLTGLLTAQAAELSGDDLEARKRFDDMVARPETAFLGLKGLLT
                     LALKQGDREAALDYARRAWALRPGSDELAETLFDLQARAGHWAEADATLLEAKRHGTL
                     AGADLLHRQALVL"
BASE COUNT          260 a          721 c          671 g          233 t
ORIGIN      
        1 cacggccgcc gctcccaccc aggccgccct gatggcggca ctcgacgacg accgcaaagc
       61 gccgaatacc gggggatcca tgaccgattg cgaacacatc aaggcccccg aacccaaggc
      121 ggacaccccg ccggcccccg aggcgacgcc ggaagcagtc ggcgacgaca tcgagggcaa
      181 gggcgtcaag tggggcgccc tgaccggcgc cgtgctggtg ctggtactgc tggtgggcgg
      241 cgtggtcacc tggccgcaat ggaaggacca ggtgatgccg gcccgcgtcg ccgcccccca
      301 atccgcgacc atcctggcgc ccaacggcgg cggcgaggtc gaggtgctgc gcgccgattt
      361 ggaccagacc cgcgaacgcc tgcgccagct tgaggcccgc ctggccgagc gggccgcagc
      421 gcccgtcggc ggcgccgatc tcggcccggt cgagaaccgc ctgggccagg tcgaacaatc
      481 gcttcgcact ctgcaggcgc agccgcaggt gccggcccgc ctggccgacg acgtcgccgc
      541 tttgggcaag caggtgggcg acctcgccaa gacctcggcc gacgcggccg ccgtgctgcg
      601 gctcgccgac cgcgtcgaaa aggtcgaggc cgagatgcgc gacctgcagg cgcgccgcag
      661 ctcggccacc gccttgctgc tggcggtcgg ccagttgcgc gaggcggtca acaatgccat
      721 gccctatgac gccgagctgc gcgccgtccg cgtcctggcg cccgagggcg gcgacaccgc
      781 cctggcgctg gacgcgctga aggcgcgggc cgccgccggc atccccaacc ggctggtgct
      841 ggcgcagcgt ttcgaggcgc tggcgcccga actggtgcgg gccgagacgc tgcccagcca
      901 gcggagctgg tggcgcgaca ccctgcaccg cctgtccacc ctggtcaccc tgcgtcgcga
      961 ggacggtgac gccgccggca attccgccgc cgccatcgtc gcccgcgccg agcagcggct
     1021 ggagcagggc gatctggccg ccgccgccgc cgagatcgag caattgcagg gcggcgccgc
     1081 cgaggccgcg cggccgtggc tggaggacgc ccgtgcccgc gccgccgccg acaagagcct
     1141 cagcgagctg accgcccacg tggtcgcctc cttcggcccg aggcaatgac catgcgccgc
     1201 ctgatcgtct tcgtcgccgc caccgctctg ctggtcttcg cgtcggtgtg gctggccgac
     1261 cgccccggcg aggtcaccat ccactggcag ggctggcgcc tggacacctc ggtgccggtg
     1321 ctgctgttga tcatcctggc caccgtcgca ttgctggaca tcgtcggccg catggtgcgc
     1381 ggcgtcgtca ccgcccccgg ccgcttcttc cgcgcgcggc acgacaagcg caagcgcgag
     1441 ggctatgtgg cgctgtccga cggcctggcc gccatcgccg ccggcgactc ccgccaggcc
     1501 cgcaagctgg cgaagaaggc cgacaagctg ctggaagacc gctcgctgac gggcctgctg
     1561 accgcccagg cggccgagct gtcgggcgac gatctggagg cgcgcaagcg cttcgacgac
     1621 atggtggcgc ggcccgagac cgccttcctg ggcctcaagg gcctgctgac cctggcgctg
     1681 aagcagggcg accgcgaggc cgcgctggat tatgcccgcc gcgcctgggc gttgcgcccc
     1741 ggctcggacg aactggccga gaccctgttc gacctgcagg cccgcgccgg ccattgggcc
     1801 gaagccgacg ccaccctgct ggaagccaaa cgccatggga cgctggccgg cgccgacctg
     1861 ctgcaccgcc aggccctggt gctgc
//
LOCUS       DATIKR010000115         3283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_183042, whole genome shotgun sequence.
ACCESSION   DATIKR010000115 DATIKR010000000
VERSION     DATIKR010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183042"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VLL76_01760"
     CDS             complement(<1..681)
                     /locus_tag="VLL76_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV28244.1"
                     /translation="MHTKNGGPAAGAGILARGDGASIAYHRTPGMSPTVVFLHGFHSD
                     MQGGKALALEAFCQRRGNAFLRFDAFGHGASSGKVEDGTIGRWTDDAVAVLEDLTEGP
                     LVLVGSSFGGWIALLAALRMRERVKGLMGIAAAPDFTEDLMWALFTAEQKQTMLETGK
                     VVLPNCYEPDNPWTVPRMLIDEARNHLLLRDAINLYCPVRLVQGQQDADVPWDTAVRL
                     ADCLAAEDV"
     gene            697..1893
                     /locus_tag="VLL76_01765"
     CDS             697..1893
                     /locus_tag="VLL76_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV28245.1"
                     /translation="MTMDETVPIQAADAAARQPVVLQVLPALVTGGVERGTVEIAQAI
                     VEAGWTAIVASQGGAMVRELARCGAKHVEMPLASKNPLVMRQNIARLEAVIAEHGVDI
                     VHARSRAPAWSAYAAANKAGAHFVTTFHGTYNLGWFGLKHVYNSVMTRGERVIAISEF
                     IAEHAERVYGCPPDKLRVVHRGVDLRKFDPTRVSPERIIQLATKWRLPDGYPVIMLPG
                     RLTRWKGQSVLIDALAALGRHDIRCLLVGSDQGRAAYRQELMDLIKKRDLADVVHIVD
                     ECNDMPAAYMLTDVVVSASTDPEAFGRVVVEAQAMGRPVIASDHGAPRETILPGRSGW
                     LTTPGDPQSLADALARFLSLSAEERADVAKLGQDFVRANFTTEQMCARTMAVYREVLG
                     LAPEAG"
     gene            1890..2807
                     /locus_tag="VLL76_01770"
     CDS             1890..2807
                     /locus_tag="VLL76_01770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSV28246.1"
                     /translation="MSGPRILVIKLGALGDFVQACGPFAAIRAHHGDADITLLTTRPY
                     AEFAAASPYFDHVWIDDKPKMWQVGKVLELRRRLSGGHFTRVYDLQTSDRSSSYFKLM
                     GKVEWSGIASGCSHPHDNPDRDFMHTIDRQAEQLRMAGIEQVPLPDLSWVKGDPHRFG
                     LPRPYVLLCPGGAPHRPAKRWPVEHFAALAAWLAQRAVTPVLLGTAKEEDEIAAIQAA
                     CPQAVSLAGRTGFLDIVALAREAMAAVGNDTGPMHLIAAAQCPSVVLFSHDSDPNLCA
                     PRGRVTILRVPDLSGLAVAEVEAALAALT"
     gene            2869..>3283
                     /locus_tag="VLL76_01775"
     CDS             2869..>3283
                     /locus_tag="VLL76_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HSV28247.1"
                     /translation="MVAITLPDGSVRKFDGPVTGLDVAKDIGPGLAKAALAIRIDGEM
                     KDLSTTIDRDTALAIVTAKDGADALELLRHDAAHVMAEAVKELYPETQVTIGPAIENG
                     FYYDFSRPTPFTPDDLEKIEAKMREIVERDEAIVRE"
BASE COUNT          515 a         1198 c         1064 g          506 t
ORIGIN      
        1 gacatcctcg gcggccaggc aatcggccag cctgacggcg gtgtcccacg gcacgtcggc
       61 gtcctgctgg ccctggacca gccgcaccgg gcaatacagg ttgatggcgt cgcgcagcag
      121 caggtggttg cgggcctcgt cgatcagcat gcgcggcacc gtccacgggt tgtccggctc
      181 atagcaattg ggcagcacca ccttaccggt ctccagcatg gtctgcttct gctcggcggt
      241 gaacagcgcc cacatcagat cctcggtgaa gtcgggggcg gcggcaatgc ccatcaaccc
      301 cttgacccgc tcgcgcatcc gcagcgccgc cagcagggcg atccagccgc cgaagctgga
      361 tcccaccagc accaacgggc cttcggtgag gtcttccagc acggccaccg cgtcgtcggt
      421 ccagcggccg atggtgccgt cctcgacctt gcccgacgag gcgccgtggc cgaaggcgtc
      481 gaagcgcaaa aaggcgttgc cgcgccgctg gcagaaggct tccagcgcca gcgccttgcc
      541 gccctgcatg tcggaatgga agccgtgcag gaacaccacg gtgggcgaca tgccgggggt
      601 gcgatggtag gcgatggacg cgccgtcgcc gcgtgctaat atcccggccc cggcggctgg
      661 gccgccattt ttggtatgca tgaacgcgcc tcttcgatga ccatggacga aaccgtaccc
      721 atccaagccg ctgatgccgc ggcccgtcaa cccgtcgtgc tgcaggtgct gccggcgctg
      781 gtcaccggcg gcgtcgaacg cggcaccgtc gagatcgccc aggccatcgt cgaagccggc
      841 tggaccgcga tcgtcgcctc gcagggcggc gccatggtgc gcgaactggc gcgctgcggc
      901 gcaaagcatg tcgagatgcc gctcgcgtcg aagaacccgc tggtgatgcg ccagaacatc
      961 gcccggctgg aagcggtgat cgccgagcac ggcgtcgaca tcgtccacgc ccgctcgcgc
     1021 gccccggcct ggagcgccta tgccgccgcc aacaaggctg gcgcccattt cgtcaccacc
     1081 ttccacggca cctacaacct gggctggttc gggctcaagc acgtctacaa ttcggtcatg
     1141 acccggggcg agcgcgtcat cgccatctcg gaattcatcg ccgagcatgc cgagcgcgtc
     1201 tacggctgcc cgcccgacaa gctgagggtg gtccatcgcg gcgtcgacct gcgcaagttc
     1261 gaccccaccc gcgtcagccc cgagcgcatc atccaactgg ccaccaagtg gcggctgccc
     1321 gacggctatc ccgtcatcat gctgcccggc cgcctgaccc gctggaaggg acagtcggtg
     1381 ctgatcgacg ctttggcggc tttggggcgt catgacatcc gctgcctgct ggtggggtcc
     1441 gaccagggcc gcgccgccta tcggcaagag ctgatggacc tgatcaagaa gcgtgacctt
     1501 gccgacgtgg tgcacatcgt cgacgagtgc aacgacatgc cggcggccta catgctgacc
     1561 gacgtggtgg tatccgcatc gaccgacccc gaggcgttcg gccgggtggt ggtcgaggcc
     1621 caggccatgg gccggccggt catcgccagc gaccacggcg ccccgcgcga gaccatcctg
     1681 cccggccggt ccggctggct gaccacgccg ggcgaccccc agtcgctggc cgacgccctg
     1741 gcccgtttcc tcagcctgtc ggccgaggaa cgcgccgacg tcgccaagct gggccaggat
     1801 ttcgtccgcg ccaacttcac caccgagcag atgtgcgccc gcaccatggc cgtctatcgc
     1861 gaggtgctgg gcctggcgcc ggaggcgggg tgagcgggcc gcgcatcctg gtgatcaagc
     1921 tgggcgccct gggcgatttc gtccaggcct gcggcccgtt cgccgccatc cgcgcccatc
     1981 acggcgatgc cgacatcacc ctgctgacca cccggcctta cgccgagttc gccgccgcca
     2041 gcccgtattt cgatcatgtc tggatcgacg acaagcccaa gatgtggcag gtcggcaagg
     2101 tgctggaact gcgccggcgc ctgagcggcg gccatttcac gcgggtctac gacctgcaga
     2161 cctcggaccg ctcgtcgtcc tatttcaagc tgatgggcaa ggtggaatgg tcgggcatcg
     2221 cctcgggctg ctcgcatccc cacgacaacc ccgaccgcga tttcatgcac accatcgacc
     2281 gccaggccga gcaattgcgc atggccggca tcgagcaggt gccgctgccc gacctgtcgt
     2341 gggtcaaggg cgacccgcac cgcttcggcc tgccccgccc ttacgtcctg ctgtgccccg
     2401 gcggtgcgcc gcaccgcccg gccaagcgct ggccggtgga gcatttcgcg gcgctggccg
     2461 cgtggctggc ccaacgtgct gtcaccccgg tgctgctggg caccgccaag gaagaggacg
     2521 aaatcgccgc catccaggcc gcctgccccc aggccgtcag cctggccggc cgcaccggct
     2581 tcctcgacat cgtcgccctg gcgcgcgagg ccatggcggc ggtcggcaac gacaccggcc
     2641 ccatgcacct gatcgcggcg gcgcaatgtc cgtcggtggt gttgttctcg cacgacagcg
     2701 accccaattt gtgtgctccg cgcggccgcg tcaccatcct gcgcgtcccc gacctttccg
     2761 gtctggcggt ggcagaggtg gaagcggcgc tcgccgcctt gacttgacgg gcaaaccccg
     2821 tactctccgc tgtttcggtt tccctcatca tcacgagagc tggttcacat ggtcgccatc
     2881 acgcttcccg acggcagcgt ccgcaagttc gacggcccgg tcacgggcct ggacgtcgcc
     2941 aaggacatcg ggccgggcct ggccaaggcc gccctggcca tccgcatcga cggcgagatg
     3001 aaggacctgt cgaccaccat cgaccgcgac accgcattgg ccatcgtcac cgccaaggac
     3061 ggcgccgacg cgctggagct gctgcgccac gacgccgccc acgtgatggc cgaggcggtc
     3121 aaggagctgt atcccgagac ccaggtcacc atcggcccgg ccatcgagaa cggcttctac
     3181 tacgacttct cgcgcccgac cccgttcacg cccgacgacc tcgagaagat cgaggccaag
     3241 atgcgcgaga tcgtcgagcg cgacgaggcc atcgtccgcg agg
//
LOCUS       DATIKR010000116         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_147299, whole genome shotgun sequence.
ACCESSION   DATIKR010000116 DATIKR010000000
VERSION     DATIKR010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147299"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1495)
                     /gene="dnaG"
                     /locus_tag="VLL76_01780"
     CDS             complement(<1..1495)
                     /gene="dnaG"
                     /locus_tag="VLL76_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HSV28248.1"
                     /translation="MLHSIDPAALQWVRDAATRLGVATLGITTQERVGYGTEPSPIHR
                     IHFLSSSLPRSMVLRSEAGARLGAAAKKFERTRWVVKSVEATDRVEEVFCAEVPETHA
                     FALDDNILTGNCFGCGAHGDAIGFEMRANHMSFTEAVEKLASECGLEVPKATPEERQR
                     EARRAGLHDAMEAASRFFEQQLHAPAGREGLQYLLGRGLKPETIARFRLGWAPDSREA
                     LKKAVMSNEMPESLLIEAGLLKKPETGASFDFFRGRVTFPVADRKGRVIAFGARILGD
                     GQPKYLNSPDTPLFHKGSTLYGLAHARESARQRNLVLAVEGYMDVIALHEAGFDFAVA
                     PLGTALTEQQIEELWRLADEPILCFDGDNAGQRAMARAAERALPILKPGKSLRFAVLP
                     HPEDPDSLIKSRGPAAMQAVLDDAQPMFEVVWKLAVADRPLDTPERRAALEKELKDKA
                     FGIADETVRWQYLGAFRDKMKQSFRPPRPAWTPGPGGMGRKFDGKRRP"
BASE COUNT          213 a          526 c          556 g          246 t
ORIGIN      
        1 ccgggcggcg cttgccgtcg aacttgcggc ccatgccgcc gggcccgggc gtccatgccg
       61 ggcggggcgg gcggaagctc tgcttcatct tgtcgcggaa ggcgcccaga tactgccagc
      121 gcaccgtttc gtcggcgatg ccgaaggcct tgtccttgag ttccttttcc agcgcggcgc
      181 ggcgctcggg ggtgtcgagc gggcggtcgg ccaccgccag cttccacacc acctcgaaca
      241 tgggctgggc gtcgtccagc accgcctgca tggcggcggg gccgcgcgac ttgatcaggc
      301 tgtcggggtc ctcggggtgg ggcagcacgg cgaagcgcag cgacttgccg ggcttgagga
      361 tgggcagcgc ccgctcggcg gcgcgggcca tggcgcgttg gccggcgttg tcgccgtcga
      421 agcacaggat cggctcgtcg gccagccgcc acagctcctc gatctgctgc tcggtcaggg
      481 cggtgcccag cggcgccacc gcaaagtcga agccggcctc gtgcagggcg atgacgtcca
      541 tgtagccctc gaccgccagt accaggttgc gctggcgcgc gctttcgcgg gcatgggcca
      601 ggccgtacag ggtcgagccc ttgtggaaca gcggggtgtc gggcgagttc aggtatttgg
      661 gctggccgtc gcccaggatg cgggcgccga aggcgatgac ccggcccttg cggtcggcga
      721 ccgggaaggt gacgcggccg cggaagaaat cgaacgaggc gccggtttcc ggcttcttga
      781 gcaggcctgc ctcgatcagc aatgattcgg gcatctcatt gctcatcacc gccttcttca
      841 gcgcctcgcg cgaatccggc gcccagccca ggcggaagcg ggcgatggtc tcgggcttga
      901 gtccgcgccc cagcaggtat tgcaggccct cgcgccccgc cggcgcgtgc agttgctgct
      961 cgaagaagcg gctagccgcc tccatggcat cgtgcaggcc ggcccggcgc gcctcgcgct
     1021 ggcgctcctc gggggtggcc ttggggactt ccaacccaca ttccgacgcc agcttctcca
     1081 ccgcctcggt gaaggacatg tggttggccc gcatctcgaa gccgatggcg tcgccatggg
     1141 cgccgcagcc gaaacaattg ccggtcagga tgttgtcgtc gagggcgaag gcatgggtct
     1201 cgggcacctc ggcgcagaac acctcctcga cccggtcggt ggcctcgacc gacttcacca
     1261 cccagcgggt gcgttcgaac ttcttggcgg cggcgccaag ccgcgcgccg gcctcggagc
     1321 gcagcaccat ggagcgcggc agcgacgacg acaggaaatg gatgcgatgg atcgggctcg
     1381 gctcggtgcc atagcccaca cgctcctggg tggtgatgcc cagggtggcg acgcccaggc
     1441 gggtcgccgc gtcccgcacc cattgcaggg ccgccggatc gatgctgtgc agcatcaccg
     1501 tgccgtcctt ggccacatgg ccgtcggtcg ccagatagcc g
//
LOCUS       DATIKR010000117         3817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_219797, whole genome shotgun sequence.
ACCESSION   DATIKR010000117 DATIKR010000000
VERSION     DATIKR010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219797"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..798
                     /locus_tag="VLL76_01785"
     CDS             <1..798
                     /locus_tag="VLL76_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HSV28249.1"
                     /translation="ASIETAMMELRGAIEVHATTEEIKEERRMLRSILDLNDVEVADV
                     MTHRRTVVTLDAATPAGELVDQILKSPFTRLPVWCDNADNIVGVVHAKDVLRAVRALG
                     GEVEKLDIRELASPPWFIPDSTTLLEQLTAFRTRREHFALVVDEYGALQGVVTLEDIL
                     EEIVGDIADEHDVAVAGVRPQADGSYVVDGSVTIRDLNREFEWRLPDEEAATIAGLVL
                     HESRQIPTVGQTFRFYGFRFEILRRHRNQITSIRIRPEQVSPDSEED"
     gene            complement(836..2020)
                     /locus_tag="VLL76_01790"
     CDS             complement(836..2020)
                     /locus_tag="VLL76_01790"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HSV28250.1"
                     /translation="MFRTIDALDVKGKRVLVRADLNVPAKDGKVTDSTRIDRSAATLK
                     ELADKGAKVIVITHFGRPKGREEKYSQKLLLEPLAKAVGKPVAWADDCIGADAEKVIA
                     AMKDGDVALLENVRFHPEEEKNDKDFAKKLAANGDLYVNDAFSTAHRAHASTEGLAHI
                     LPAAAGRLMQAELEALGKALEKPEKPVAAVVGGAKVSTKLDLLGNLVSRVDYLIIGGG
                     MANTFMFAMGKDVGKSLCEKEMADTAREIMDKAKKAGCHIVLPIDVVVASEFAANAPN
                     KVVSLDAVPADMMILDAGPASVEAIIDRLNGCKTLVWNGPMGAFEIEPFDMATNAVAR
                     AAAERTQQGKLLTVAGGGDTVAALAKAGVDTKFSYVSTAGGAFLEWLEGKDLPGVAAL
                     KK"
     gene            complement(2087..3088)
                     /gene="gap"
                     /locus_tag="VLL76_01795"
     CDS             complement(2087..3088)
                     /gene="gap"
                     /locus_tag="VLL76_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020557940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HSV28251.1"
                     /translation="MTIRVGINGFGRIGRMVFRAVAKDFPEIEIVAINDLLDADYLAY
                     MLKYDSVHGRFNGDISVDGNTLVVNGKKIRLTAEKDPANLKWGDVGVDVVVESTGFFL
                     DKASCEKHLAAGAKKVVQSAPSKDDTPMFVYGVNHTKYAGEAIVSAASCTTNCLAPVA
                     KVLHDNWGIKRGLMTTVHAATATQKTVDGPSSKDWRGGRGILENIIPSSTGAAKAVGK
                     VLPELNKKLTGMSFRVPTSDVSVVDLTVELTKEASYEDICKAMKAASEGELKGVLGYT
                     AEKVVATDFRGNTHPSIFDADAGIALDSTFVKVVSWYDNEYGYTCNMLRFVQHVAKN"
     gene            3598..>3817
                     /locus_tag="VLL76_01800"
     CDS             3598..>3817
                     /locus_tag="VLL76_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012641410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide-disulfide oxidoreductase"
                     /protein_id="HSV28252.1"
                     /translation="MAQRVLVLGGGFGGMFAARRLSRLPRDQVCVELVDDNNYFVFQP
                     LLPEVAAGTLNAADAVTPFRVLLPGVKVN"
BASE COUNT          605 a         1203 c         1310 g          699 t
ORIGIN      
        1 gcctcgatcg agaccgccat gatggagctg cgcggcgcca tcgaggtcca cgccaccacc
       61 gaggagatca aggaagagcg gcggatgctg cgctcgatcc tcgacctcaa cgacgtcgag
      121 gtcgccgacg tcatgaccca ccgccgcacc gtggtcaccc tggatgccgc cacgccggcg
      181 ggcgagctgg tcgaccagat cctgaaaagc ccgttcaccc gcctgccggt gtggtgcgac
      241 aacgccgaca acatcgtcgg cgtggtgcat gccaaggacg tgctgcgggc ggtgcgggcg
      301 ctgggcggcg aggtggagaa gctggacatc cgggaactgg cgtcgccgcc ctggttcatc
      361 cccgattcca ccaccctgct ggagcagttg acggcgttta ggacccggcg cgagcatttc
      421 gccctggtgg tggacgaata cggcgcgctg cagggcgtgg tgacgctgga agacatcctg
      481 gaggagatcg tcggcgacat cgccgacgag cacgacgtcg cggtggccgg cgtgcggccc
      541 caggcggacg ggtcatacgt ggtggacggc tcggtcacca tccgcgacct caatcgcgaa
      601 ttcgaatggc gcctgcccga cgaggaggcg gcgaccatcg cgggcctggt gctgcatgaa
      661 agccgtcaga tcccgacggt ggggcagacg ttccggttct atggcttccg cttcgaaatc
      721 ctgcggcgcc accgcaacca gatcacctcg atccgcatcc ggccggaaca ggtgtcgccg
      781 gattcggaag aggattgacc gccacggcgc cgtggcgccg cagcggtcca gtaccctact
      841 tcttcagggc cgcgacgccc ggcaggtcct tgccctcgag ccattcgagg aaggcgccgc
      901 cggcggtcga gacgtacgag aacttggtgt ccacgcccgc cttggccagg gccgcgacgg
      961 tgtcgccgcc gccggccacg gtcagcagct tgccctgctg ggtgcgctcg gccgcggcac
     1021 gagccaccgc gttggtggcc atgtcgaacg gctcgatctc gaacgcgccc atggggccgt
     1081 tccacaccag cgtcttgcag ccgttgaggc ggtcgatgat ggcctcgacg ctggcggggc
     1141 cggcgtccag gatcatcatg tcggccggca cggcgtccag cgacaccacc ttgttcggcg
     1201 cgttggcggc gaactcgctg gccacgacca cgtcgatcgg cagcacgatg tggcagccgg
     1261 ccttcttggc cttgtccatg atctcgcgcg cggtgtcggc catttccttc tcgcacagcg
     1321 acttgccgac atccttgccc atggcgaaca tgaaggtgtt ggccatgccg ccgccgatga
     1381 tcagataatc gacgcgcgac accaggttgc ccagcaggtc cagcttggtc gagaccttgg
     1441 cgccgccgac cacggccgcc accggcttct cgggcttctc cagcgccttg cccagggctt
     1501 ccagctcagc ctgcatcaga cggccggcgg cggccggcag gatgtgggcc aggccttcgg
     1561 tcgaggcgtg ggcgcggtgg gcggtcgaga aggcgtcgtt gacgtagagg tcgccgttgg
     1621 cggccagctt cttggcgaag tccttgtcgt tcttttcctc ttccggatgg aagcggacgt
     1681 tttccagcag ggcgacgtcg ccgtccttca tggcggcgat gaccttctcg gcgtcggcgc
     1741 cgatgcaatc gtcggcccag gcaaccggct tgccgacggc cttggccagc ggctcgagca
     1801 gcagcttctg ggaatacttc tcctcgcggc ccttggggcg gccgaaatgg gtgatcacga
     1861 tcaccttggc gcccttgtcg gcgagttcct tgagagtggc cgccgagcgg tcgatgcggg
     1921 tcgagtccgt gaccttgccg tccttggccg gaacgttgag gtcggcgcgg accagcaccc
     1981 gcttgccctt gacgtcgagg gcgtcgatgg tgcggaacat gggctattcc cccttatcaa
     2041 aagaaaagcg ccggcccccc ggatgggcgg gccggcgcgt cgggccttag ttcttggcga
     2101 cgtgctgcac gaagcgcagc atgttgcagg tgtagccgta ctcgttgtcg taccaggaca
     2161 cgaccttgac gaaggtgctg tccagcgcga tgccggcgtc ggcgtcgaag atcgacggat
     2221 gggtgttgcc gcggaagtcg gtggcgacca ccttctcggc ggtgtagccc agcacgccct
     2281 tcagctcgcc ttccgaggcc gccttcatgg ccttgcagat gtcctcgtag ctggcttcct
     2341 tggtcagctc gacggtcagg tcgaccaccg agacgtccga ggtggggacg cggaaggaca
     2401 tgccggtcag cttcttgttc agctcgggca ggaccttgcc gacggccttg gcggcgccgg
     2461 tcgaggacgg gatgatgttt tccaggatgc cgcggccgcc gcgccaatcc ttcgaggacg
     2521 ggccgtcgac ggtcttctgg gtggcggtgg cggcgtgcac ggtggtcatc aggccgcgct
     2581 tgatgcccca gttgtcatgc agcaccttgg cgaccggcgc caggcagttg gtggtgcagg
     2641 acgcggccga gacgatggct tcgccggcgt acttggtgtg gttgacgcca tagacgaaca
     2701 tcggggtgtc gtccttggac ggagccgact gcacgacctt cttggcgccg gcggccaggt
     2761 gcttctcgca cgacgccttg tccaggaaga agccggtgga ctcgacgacc acgtcgacgc
     2821 ccacatcgcc ccatttcagg ttggcggggt ccttctcggc ggtcaggcgg atcttcttgc
     2881 cgttgaccac cagggtgttg ccgtcgaccg agatgtcgcc gttgaagcgg ccgtgcaccg
     2941 agtcgtactt cagcatgtag gccaggtagt cggcatcgag caggtcgttg atggcgacga
     3001 tctcgatttc cgggaaatcc ttggcgacgg cgcggaacac catgcgtccg atgcggccga
     3061 aaccgttgat gcctacacga atggtcattt tttcctccac ttgggtacga cgcggcggag
     3121 caggcgcaac cctggcctgg cggccagtgt gccagcgcgg cacggagtgt tgttggggct
     3181 caggcctgcc tgaacgggct tccatattgc acactccaag gggcgaatcc agccctgaaa
     3241 acggcaaatc gacccaggcg gcctggataa gtgatattcg tgaaatattc ccacccggtt
     3301 gggggagaac acgacacccg atgcggcggg aaagtaatat tgaagaggta tctcaagtcc
     3361 atcgtacatc ttgctgacca ttgctgcgct gcaagaatta ttttgcgccg caaaaataga
     3421 gtgcggtgac ttgcattcac ttgcaccctg tctttccgcc gtttcgggtg ggcgtgtccc
     3481 acccaagggt ggcggcacga gctttgccgc aacaccatcg tcgtgcccgg gccgacggtt
     3541 gttagggcgt gcgcgcatgc gcatatgacg gacgggccat gacgcaggat aggcacgatg
     3601 gcgcagcgtg tgctggtgct gggcgggggc ttcggaggga tgttcgcggc gcggcgattg
     3661 tcgcgcctgc cgcgcgacca ggtgtgcgtc gaactggtgg acgacaacaa ttacttcgtc
     3721 ttccagccgc tgctgcccga agtggcggcg ggcacgctga acgccgccga cgcggtgacg
     3781 ccgttccgcg tgctgctgcc gggggtgaag gtcaacg
//
LOCUS       DATIKR010000118         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_231715, whole genome shotgun sequence.
ACCESSION   DATIKR010000118 DATIKR010000000
VERSION     DATIKR010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231715"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..949)
                     /gene="serB"
                     /locus_tag="VLL76_01805"
     CDS             complement(56..949)
                     /gene="serB"
                     /locus_tag="VLL76_01805"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HSV28253.1"
                     /translation="MDNVLTLIAAPHAADLDDGLVADIRAALKGLGADVGMPDWLSPG
                     RACDIAFGHLAPEQADSAARHRLGDLAVDVVAQASSGRRKMLLVADMDSTMVTGETLD
                     ELAEFAGIKDKIAAITARAMNGEIGFEAALKERIGLLDGLPASALDEAWERVEYTGGA
                     RKLVQTMKKHGAYAVLVSGGFKYFTARVREHCGFDVDLANEFIFVNGRLKGVQEPILG
                     REAKLATLMGTAGERQIPLSLAAAVGDGANDLDMLRAAGLGVAFHAKPIVSAEARVRI
                     DHGDLTAMLYAQGYRDGEMVG"
     gene            1091..1477
                     /locus_tag="VLL76_01810"
     CDS             1091..1477
                     /locus_tag="VLL76_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012900215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HSV28254.1"
                     /translation="MARVPDDLDSLARSVVDAAFKVHSQLGPGLLESVYEHCLAHELT
                     KRGIKVARQVPIPIIYDGEQLEAGLKLDLLAGNAIVIEVKAVEKDNPVYRAQLLTYLK
                     LTGKRLGFLINFNVPLIKDGIRRMAL"
     gene            1526..>2063
                     /locus_tag="VLL76_01815"
     CDS             1526..>2063
                     /locus_tag="VLL76_01815"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HSV28255.1"
                     /translation="MKTKSALVIAGPTASGKSALALAAAREFDGVVINADSMQVYDVL
                     RVVTARPSEQDESLAPHRLYGVLPPSVACSAALWKDRAAAEMEKAWAAGKLPVVVGGT
                     GLYIRTLMQGISPVPDIPADIRDAARALLAEKGNADFHAMLAARDPVMAERLGPGNSQ
                     RLVRAWEVIEATGRSLAEW"
BASE COUNT          339 a          667 c          698 g          359 t
ORIGIN      
        1 tatgaatgcg tgcttcgcac gcgcgcttgg ccggggtgac gtaacggaaa gggcgttacc
       61 ccaccatctc tccgtcgcga taaccctggg cgtacagcat cgcggtgagg tcgccatggt
      121 cgatgcggac gcgggcctcg gcggacacga tgggcttggc gtggaaggcc acgcccaggc
      181 cggcggcccg caacatgtcg aggtcgttgg cgccgtcgcc gaccgcagcg gccaggctga
      241 gggggatctg gcgctcgccg gcggtgccca tcaaggtcgc cagcttggcc tcgcggccca
      301 ggatcggttc ctgcacgccc ttgaggcggc cattgacaaa gatgaactcg ttggccaggt
      361 cgacgtcgaa gccgcaatgt tcgcgcacgc gggcggtgaa gtatttgaag ccgcccgaca
      421 ccagcacggc ataggcgccg tgcttcttca tggtctgcac cagcttacgg gcgccgccgg
      481 tgtattcgac ccgttcccag gcctcgtcca gcgccgaggc cggcaggccg tcgagcaggc
      541 cgatgcgttc cttcagcgcc gcctcgaagc cgatctcgcc gttcatggcg cgcgccgtga
      601 tggcggcgat cttgtccttg atgccggcga actcggccag ttcgtccagg gtttcgccgg
      661 tgaccatggt ggaatccatg tcggccacca gcagcatctt gcgccgcccg ctcgaggctt
      721 gcgccaccac gtccaccgcc aggtcgccca gccggtgccg cgccgccgaa tcggcctgct
      781 cgggcgccag gtggccgaac gcgatgtcgc aggcacggcc cggcgacagc cagtccggca
      841 tgccgacatc ggcgcccaac cctttgaggg ccgcccggat gtcggccacc aggccgtcgt
      901 cgagatccgc cgcatggggc gctgcgatca gggtaagcac gttgtccatg gatgacgctc
      961 gcttgggaag gggcggtggc ggcacagctt tacggggcaa aggggtcgct tggcaagggg
     1021 gggcgctcgc caaggcggta tcggtttggt aaaaacgatt cggtcaccac caagacacca
     1081 agacaccaag atggcgcgtg tgcccgacga cctcgattcc ctcgcccgct cggtggttga
     1141 tgccgcgttc aaggtccatt cgcagctagg ccccggattg ctggaatcgg tgtacgaaca
     1201 ttgcctcgcg catgagctaa cgaagcgtgg cattaaagtc gcgcgacagg tcccgatccc
     1261 tatcatatac gatggggagc aactggaggc cggactcaag ctggacctgt tggctggaaa
     1321 tgccattgtc atcgaggtca aagcggtcga aaaagacaat ccggtttatc gggctcagtt
     1381 gctgacctat ctcaagctga ccggcaagcg cctcggcttc ttgatcaact tcaacgttcc
     1441 tctgatcaag gatggcatcc ggcgcatggc gctttagcac gaaatatccg atcgcaagct
     1501 ctcttggtgt cttggtgtct tggtggtgaa aacaaagtcc gccctcgtca tcgccggccc
     1561 caccgcgtcc ggcaagtcgg ccctggccct cgccgccgcg cgtgagttcg acggcgtggt
     1621 gatcaatgcc gattccatgc aggtctacga cgtgctgcgc gtcgtcaccg cgcggccgtc
     1681 ggaacaggat gagtccctgg cgccgcatcg cctgtatggc gtgctgccgc cgtccgtcgc
     1741 ctgctcggcg gcgctgtgga aggacagggc ggcggcggag atggagaagg cctgggccgc
     1801 cggcaagctg cctgtcgtgg tgggcggcac cgggctttac atccgcaccc tcatgcaggg
     1861 catctcgccg gtgcccgaca tcccggccga catccgtgac gccgcccgcg ccttgctggc
     1921 ggaaaaaggc aatgccgact tccacgccat gctggcggcg cgcgatccgg tgatggcgga
     1981 gcggttgggg ccgggcaaca gccagcggct ggtgcgggcc tgggaggtga tcgaggccac
     2041 cggccgctcg ctggcggaat ggc
//
LOCUS       DATIKR010000119         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195383, whole genome shotgun sequence.
ACCESSION   DATIKR010000119 DATIKR010000000
VERSION     DATIKR010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195383"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1500)
                     /locus_tag="VLL76_01820"
     CDS             complement(<1..1500)
                     /locus_tag="VLL76_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008993875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HSV28256.1"
                     /translation="MLFNSSVFLFAFLPIVLAGWHLLKPRAPWRLTVTWLVAASLVFY
                     GWFNPVYILFILGSIAGNYRLGLAIAAAGAKTRKPLMLAGVAANLGLLGYFKYANFLV
                     ATVNGAAGTAFDLGPIVLPLAISFFTFQQVAYLVDVWKGRCEEHDFLDYCLFVTFFPQ
                     LIAGPIVHHSEMMPHFRRPIRRGLLSAWTAWGLSVLAVGLFKKAVIADGLALYADPVF
                     DAAAAGTMPTFIEAWGGALAYTLQIYFDFSGYSEMAIGLGLLFGVRLPLNFASPYKAT
                     NIVEFWRRWHITLSRFLRDYLYIPLGGNRKGPARRSANLMATMLLGGLWHGAGWTFVA
                     WGCLHGLYLLVNHAWRGATGGRSFGRAGALAGWALTFLGVVVAWVFFRAADFPAAFAM
                     LAGMAGANGVVVPAEILARLGGAQAWAQALGIAAAPGDLTFFFGMGQVAALAAALAIA
                     VGLPNVHELLVRRRADGRAGLVRALRWRLSPAWGLAAGGAVAAALFGVVR"
     gene            complement(1577..>1961)
                     /locus_tag="VLL76_01825"
     CDS             complement(1577..>1961)
                     /locus_tag="VLL76_01825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28257.1"
                     /translation="DRPGLLGDRQIVYGRSAELIARSRLVLSHVSTALGLVVLFGKPV
                     MLVVTEDHYRLTPGHAGAFDQAARSLGTPLRFIDDPAGTDLSGARSVDAEAYARYASR
                     YIRHPDAPQGLLWDIVLDRIEGRTG"
BASE COUNT          362 a          683 c          696 g          220 t
ORIGIN      
        1 gcggaccacc ccgaacagcg cggcggcgac cgcgcctccg gcggccaggc cccaggccgg
       61 gctcaggcgc cagcgcagag cgcggaccag cccggcgcgg ccgtcggcgc gccggcggac
      121 cagcaattcg tggacgttgg gcagccccac ggcgatcgcc agggcggcgg ccagcgccgc
      181 cacctgcccc atgccgaaga agaaggtcag gtcgcccggc gcggcggcga ttcccagcgc
      241 ctgcgcccac gcctgtgcac cgccaagacg cgccaggatc tccgccggca ccaccacgcc
      301 gttggcgccc gccatgccgg ccagcatggc gaaggccgcc gggaagtcgg cggcgcggaa
      361 gaacacccag gccacgacga cgcccaggaa ggtcagggcc catcccgcca gcgcgccggc
      421 gcggccgaac gagcgcccgc cggtggcgcc gcgccaggcg tggttgacca gcaggtaaag
      481 gccgtgcagg cagccccagg ccacgaaggt ccagccggcg ccgtgccaca ggccgcccag
      541 cagcatggtc gccatcaggt tggccgagcg ccgcgccggg cctttgcggt tgccgcccaa
      601 cgggatgtac aggtagtcgc gcaggaagcg cgacagcgtg atgtgccagc gccgccagaa
      661 ttcgacgatg ttggtggcct tgtagggcga cgcgaagttc agcggcagcc gcaccccgaa
      721 cagcagcccc aggccgatcg ccatttcgga atagcccgag aagtcgaaat agatttgcag
      781 cgtgtaagcc agcgcaccgc cccacgcctc gatgaaggtg ggcatggtgc cggcggcggc
      841 ggcgtcgaac accgggtcgg cgtacagcgc cagcccgtcc gcgatcaccg ccttcttgaa
      901 tagcccgacc gccagcacgc tcaggcccca cgccgtccac gccgacaaca ggccgcgccg
      961 gatcggccgg cggaaatgcg gcatcatctc gctgtggtgg acgatggggc cggcgatcaa
     1021 ctggggaaag aacgttacga aaagacaata atcgaggaaa tcgtgctcct cgcaccgccc
     1081 cttccacacg tcgaccagat aggcgacctg ctggaaggtg aagaacgaga tggccagcgg
     1141 cagcacgatg gggcccaggt cgaacgccgt gccggcggcg ccgttgacgg tggcgaccag
     1201 gaagttggcg tatttgaaat agcccagcag gcccaggttg gcggccactc ccgccagcat
     1261 cagcggtttg cgcgtcttgg cgccggccgc cgcgatggcg aggcccaggc ggtaattgcc
     1321 ggcgatcgag cccaaaatga acaggatgta gaccgggttg aaccagccgt agaacaccag
     1381 cgaggcggcg accagccagg tgacggtcag gcgccacggc gcccgcggct tcagcagatg
     1441 ccagccggca aggacgatcg gcaggaaggc gaacaggaag acggaggaat tgaaaagcat
     1501 cagcgctccg cttgcgaccg gcggcggcgc ccggcgaaag tcgtgcggag tatatgacgg
     1561 ggcgcggccc gcgctgtcaa ccggtccgcc cttcgatccg gtccagcacg atgtcccaca
     1621 gcaggccctg gggagcgtcg gggtggcgga tgtagcggct ggcgtagcgg gcataggcct
     1681 ccgcgtccac cgatcgggcc cccgacaggt cggtgccggc gggatcgtcg atgaagcgca
     1741 acggcgtgcc cagcgaccgt gccgcctggt cgaaggcgcc ggcatggccc ggcgtcaggc
     1801 ggtaatggtc ctcggtgacc accagcatca ccggcttgcc gaacagcacc accaggccca
     1861 gcgccgtgct gacgtgcgac agcaccagcc gcgaccgcgc gatcagttcc gccgagcggc
     1921 cgtaaacgat ctggcggtcg cccagcaggc cggggcggtc g
//
LOCUS       DATIKR010000120         3086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_1930, whole genome shotgun sequence.
ACCESSION   DATIKR010000120 DATIKR010000000
VERSION     DATIKR010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VLL76_01830"
     CDS             <1..581
                     /locus_tag="VLL76_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-diacylglycerol O-phosphatidyltransferase"
                     /protein_id="HSV28258.1"
                     /translation="FGAELDSLSDFVSFGVAPAMLLYFWTMQGAGGLGWALVLLYAVC
                     CALRLARFNTMIGAPDLPPYAYNFFTGVPSPAAAGVVLLPMVASFEFGEAFFAKPAVV
                     AVFLAGVAFLMVSNIPTFSFKKVRIPHKWVLPILLVIGLLAAFMVTEPWLTLAFLGAA
                     YLGLLPVSVRSFRRLKAEAEAVAGDEPPPAKA"
     gene            868..1884
                     /locus_tag="VLL76_01835"
     CDS             868..1884
                     /locus_tag="VLL76_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV28259.1"
                     /translation="MRTLKALLAAGAIAVLPAAAHAQWYIGADAGVNFTEDSSGSGNG
                     RSYKGEYEWGYVGLGQVGYNFGGPKAEFEVGYRTNDHDNINNISANGDTSSWSFMANG
                     IYEFLPQSKFHPFLGAGIGYANVDTNGTSAGVAYSGDEWVFAYQGLAGVAYDVADNVA
                     IKAQYRYFATLDYDIRATNGLRGEADYNNHSVLVGLTYKFAKPAPVVAAAPAPTPVAP
                     APTPAPKAAPVQKNYMVFFDFNKADITPEASKIIGQAVTTAKAGNATRVDLTGHADRS
                     GSDKYNMALSLKRANAVKAAMVKQGVPADQISVVAKGESAPLVPTADGVREPQNRRVE
                     IVLP"
     gene            2016..>3086
                     /locus_tag="VLL76_01840"
     CDS             2016..>3086
                     /locus_tag="VLL76_01840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28260.1"
                     /translation="MQVPERTVSIRLVVVGVALAVTVLLGVLGTVLIRQAHERMTDAA
                     EQTMTGYARLVALAHSQWVAESEVLLASLAGVVERGEVASGQCTYTLSALLRRAKGYD
                     TFLIAGPDGDVWCGPRPLNTPVNVADRSYFKQALASHAFTAGEYIVGRVSGVRTLPLA
                     YPLMRPDGEVAAVIVAGKKLAWFREIVATLDMPTETHVALIDGTGATLAHYPGDASDD
                     EIPRGVRDWAIQATRDGETSVHVGPGHGGDERIHAFSPLGEVMGAGVVISLPSREALA
                     PVHTFLIHATIALASALALSILLLLLVLRGTILIPVARLLAGMREVRAGNRTWRTRGK
                     AGGSTEMTELYRSFDGMLTELNF"
BASE COUNT          511 a         1077 c          983 g          515 t
ORIGIN      
        1 agttcggggc cgagctggat tcgctgtccg acttcgtgtc gttcggcgtg gcgccggcca
       61 tgctgctgta tttctggacc atgcagggag ccggcggcct gggctgggcg ctggtgctgc
      121 tctatgccgt gtgctgcgcg ctacggctgg cgcgcttcaa caccatgatc ggcgcccccg
      181 atctgccgcc ctacgcctac aacttcttca ccggcgtgcc gtcgccggct gcggccggtg
      241 tggtgctgct gcccatggtc gccagcttcg aattcggcga ggcgttcttc gccaagccgg
      301 cggtggtggc ggtgttcctg gccggcgtcg ccttcctgat ggtcagcaac atccccacct
      361 tctcgttcaa gaaggtgcgc atcccgcaca aatgggtgct gccgatccta ctggtaatcg
      421 gcctgctggc cgccttcatg gtcaccgagc cgtggctgac cctggccttc ctgggcgccg
      481 cctatctggg cctgctgccg gtgtcggtcc gctcgttccg ccgcctcaag gccgaggccg
      541 aagcggtggc cggcgacgaa ccgccgcccg ccaaggcata aaaagaaagg cccagcgccg
      601 agaggactgg gccttttcag ggaggtcgcc ggagcgcccg gccgatcccg atgacagcgg
      661 cggccggtgg cgttccgatc tcctggctac catattagaa aacactaatc aagcaggatc
      721 gagcgacgcc acagcgttgc aggtttgcaa cagcacccac gcaatctaac ggattacgtg
      781 cgcgccccct tgaggggacc ggtcacctgc ggtagaagca atgaagattt ccgcgaacca
      841 ccatcgcaac cggaaggttt gaccgccatg cgtaccctca aggcccttct cgccgccggc
      901 gccatcgccg tcctgcccgc cgccgcccac gcccagtggt acatcggcgc ggatgccggc
      961 gtgaacttca ccgaagattc gtcgggttcc ggcaacggcc ggagctacaa gggcgagtac
     1021 gagtggggct atgtcggcct cggccaggtc ggctacaact tcggcggccc caaggccgag
     1081 ttcgaagtgg gctaccgcac caacgaccac gacaacatca acaacatctc cgccaacggc
     1141 gacaccagct cgtggtcgtt catggccaac ggcatctacg agttcctgcc gcagagcaag
     1201 ttccacccgt tcctgggcgc cggtatcggt tatgccaacg tcgacaccaa cggcacatcg
     1261 gccggcgtcg cctattcggg tgacgagtgg gtgttcgcct accagggctt ggccggcgtc
     1321 gcctatgacg tggccgacaa cgtcgccatc aaggcgcagt accgctactt cgcgaccctg
     1381 gattacgaca tcagggccac caacggcctg cgcggcgaag ccgactacaa caaccattca
     1441 gtgctggtcg gtctgaccta caagttcgcc aagccggccc cggtcgtcgc cgccgctccg
     1501 gctccgaccc cggtcgcccc ggccccgacc ccggccccca aggccgctcc ggtgcagaag
     1561 aattacatgg tgttcttcga cttcaacaag gccgacatca cccccgaggc atcgaagatc
     1621 atcggccagg ccgtgaccac cgccaaggcc ggcaacgcca cccgcgtcga cctgaccggc
     1681 catgccgacc gctcgggttc ggacaagtac aacatggccc tgtcgctgaa gcgcgccaac
     1741 gctgtcaagg cggccatggt caagcagggc gtcccggccg accagatctc ggtcgtcgcc
     1801 aagggcgaaa gcgccccgct ggttccgacc gccgacggtg tccgcgagcc gcagaaccgc
     1861 cgcgtcgaga tcgtcctgcc ctaatccggc aagaccgctc aaaggaagaa ccccgccggg
     1921 cgaccggcgg ggttttttca tgggtggcga ccgccttgcc cccttccctc cccaacccaa
     1981 aagagtaaac tggatcgatc gcagaggggg cggccatgca ggtgccggag cgaaccgtca
     2041 gtatccgtct cgtggtcgtc ggcgtcgccc tggccgtgac cgtgttgctg ggcgtgctgg
     2101 ggaccgtgct catccgccag gcgcacgagc gcatgaccga cgcggccgag cagacgatga
     2161 cgggctatgc ccggctggtg gcgctggccc attcccagtg ggtggcggaa agcgaagtgc
     2221 tgctggcctc gctggccggc gtggtcgagc ggggcgaagt cgcctcgggc caatgcacct
     2281 ataccctgtc ggcgctgctg cggcgcgcca agggctacga caccttcctg attgccggtc
     2341 ccgacggtga cgtgtggtgc ggcccccggc cactcaacac gcccgtgaac gtcgccgacc
     2401 gctcatattt caagcaggca ctggcgtcgc acgccttcac ggccggcgaa tacatcgtcg
     2461 gccgcgtcag cggcgtgcgc accctgcccc tggcctatcc cttgatgcgg cccgacggcg
     2521 aagtggcggc ggtgatcgtc gccggaaaga aactggcgtg gttccgcgag atcgtggcga
     2581 cgctggacat gcccaccgaa acccatgtgg cgctgatcga cggcaccggc gccaccctgg
     2641 cccattaccc tggcgacgcc tcggacgatg aaattccacg cggcgtccgc gattgggcga
     2701 tccaggcgac acgggacggt gaaacctcgg tccatgtagg ccccggccac ggcggcgacg
     2761 agcgcattca cgccttcagc ccgctgggag aggtaatggg cgccggcgtg gtgatttcgc
     2821 tgccgtcgcg cgaagccctg gcccccgtcc ataccttcct aattcacgcc accatcgcct
     2881 tggcgtccgc gctggcgctg tcgatcctgc tgttgctgct ggtgctgcgc ggtaccatcc
     2941 tgataccggt ggcgcgattg ctggcgggca tgcgcgaggt ccgcgccggc aaccgcacat
     3001 ggcggacccg tggcaaggcg ggcggctcga ccgagatgac cgagctgtat cgctcgttcg
     3061 acggcatgct gaccgagctg aacttc
//
LOCUS       DATIKR010000121         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_1931, whole genome shotgun sequence.
ACCESSION   DATIKR010000121 DATIKR010000000
VERSION     DATIKR010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..580
                     /locus_tag="VLL76_01845"
     CDS             <1..580
                     /locus_tag="VLL76_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CheB methylesterase domain-containing protein"
                     /protein_id="HSV28261.1"
                     /translation="AGTGYSMVGIVSSTGGPQALTQLLGALGPGFPLPILLVQHITSS
                     FLEGFVSWLSGVTPFQVSIAKDDEEPQPGRVYMPSADRHLVLRGGRLTLIDTPPVCSQ
                     KPSGSVLLASLAKDTGRRGIGVVLTGMGADGADGLLDMHKAGAHTIAEDESTCTVFGM
                     PAAAQKLGATREMLPLGDIAPRLKELAGGGKG"
     gene            577..>2215
                     /locus_tag="VLL76_01850"
     CDS             577..>2215
                     /locus_tag="VLL76_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28262.1"
                     /translation="MSEERQFILVVEDSATQALRLQHVLETEGFETVCAFSGEEALEE
                     MNRRLPDLCIVDYHLPGIQGDELCRQIHMNLTTRSIPILMLTADETQATELHGLESGA
                     DDFVSKSEDLEILLLRVHNLLRKSRREESVLEVARSLFRRARVLIIDDSATYRESLAE
                     ELREEGCEVTLVTGGPDGLKRLAENDYDCVMVDMVMPEMDGIAVCQALAERRSDTESP
                     IVVLMLSAYENKENVTRALEAGADDFIGKSTEMSVLRARLRALLRRKFLLEQNHRIIE
                     EFKVREMEALRAKAEKEAAEARAALAEGLEKANRELEQANQKLRETQVQLIQNEKMAS
                     LGQLVAGIAHEINNPLSFALSNVFTVQNWLTAVLGEAGDGLNADLRARLDKARQRIAD
                     SGEGLERVRELVVKLRTFSRLDEGEFKTVDIKDAIESVLLFLRHKMADRVELVRDYAA
                     DNQLACYAGQLNQVLMNVLANAVDAIGERGTITVRTAVEGDDFVVSVKDTGCGIPPDH
                     LERIFDPFFTTKPVGQGTGLGLAISFKIVQAHGGRIDV"
BASE COUNT          390 a          719 c          764 g          342 t
ORIGIN      
        1 ggccggcacc ggctattcca tggtcggcat cgtctcgtcc accggcgggc cgcaggcgct
       61 gacccagttg ctgggggctt tgggacccgg cttcccgctg ccgatcctgc tggtgcagca
      121 catcacgtcg agcttcctgg aaggcttcgt cagttggctg tcgggcgtca cgccgttcca
      181 ggtcagcatc gccaaggacg acgaggagcc gcagccgggc cgcgtctaca tgccctcggc
      241 cgaccgccat ctggtgctgc gcggcggccg cctgaccctg atcgacacgc cgccggtgtg
      301 cagccagaag ccgtccgggt cggtgctgct ggcgtctttg gccaaggata cgggccggcg
      361 cggcatcggc gtggtgctga ccggcatggg ggccgacggc gccgacggcc tgctggacat
      421 gcacaaggcc ggcgcccaca ccatcgccga ggacgaaagc acctgcaccg tgttcggcat
      481 gccggcggcg gcccagaagc tgggggcgac gcgcgagatg ctgcccttgg gcgacatcgc
      541 gccgcgactg aaggaacttg ctgggggagg caagggatga gcgaggagcg ccaattcatc
      601 ctggtggtcg aagactcggc gacgcaggcc ctgcgcctgc agcacgtgct ggagaccgag
      661 gggttcgaga cggtgtgcgc cttctcgggt gaggaagcgc tggaggagat gaaccgccgg
      721 ctgcccgatc tgtgcatcgt cgattaccac ctgccgggca tccagggcga cgagctgtgc
      781 cgtcagattc acatgaacct gaccacccgc tcgatcccga tcctgatgct gaccgccgac
      841 gagacccagg ccaccgagct gcatgggctg gaatcgggcg ccgacgactt cgtgtcgaag
      901 tccgaggatc tggaaatcct gctgctgcgc gtccacaacc tgctgcgcaa gtcgcgccgc
      961 gaggaatcgg tgcttgaggt ggcgcgctcg ctgttccgcc gcgcccgcgt gctgatcatc
     1021 gacgacagcg ccacctatcg cgaaagcctg gccgaggaac tgcgcgaaga gggctgcgag
     1081 gtcacgctgg tgaccggtgg ccccgacgga ctgaagcggc tggcggaaaa cgactacgac
     1141 tgcgtcatgg tcgacatggt gatgcccgag atggacggca tcgccgtctg ccaggccctg
     1201 gccgagcgcc gctcggacac cgaatcgccg atcgtggtgc tgatgctgtc ggcctatgag
     1261 aacaaggaga acgtcacccg cgcgctcgag gccggcgccg acgacttcat cggcaagtcc
     1321 accgaaatga gcgtgctgcg cgcccgcctg cgcgccctgt tgcgccgtaa gttcctgctg
     1381 gaacagaacc accgcatcat cgaggaattc aaggtccgcg agatggaggc cttgcgcgcc
     1441 aaggccgaga aggaggccgc cgaggcccgc gccgccttgg ccgaggggct ggaaaaggcc
     1501 aaccgcgaac tggagcaggc caaccagaaa ctgcgcgaaa cccaggtcca gttgatccag
     1561 aacgaaaaga tggcgtcgct gggccagttg gtcgccggca tcgcccacga gatcaacaac
     1621 ccgctgtcct tcgccctgtc caacgtcttc acggtgcaga actggctgac ggcggtgctg
     1681 ggcgaggccg gcgacggcct caacgccgac ctgcgcgccc gcctcgacaa ggcgcgccag
     1741 cgcatcgccg attccggcga ggggctggaa cgggtgcggg agctggtggt caagctgcgc
     1801 accttctcgc gcctcgacga aggcgagttc aagacagtgg acatcaagga cgccatcgaa
     1861 tcggtgctgc tgttcctgcg ccacaagatg gccgaccggg tcgaattggt gcgcgattac
     1921 gccgccgaca accagctggc ctgctatgcc ggccagttga accaggtgct gatgaacgtg
     1981 ctggccaacg cggtggacgc catcggcgag cgcggcacca tcaccgtgcg gacggccgtc
     2041 gagggcgatg acttcgtcgt gtcggtcaag gacaccggct gcggcatccc tcccgaccac
     2101 ctggagcgga tcttcgatcc gttcttcaca actaagccgg tcgggcaggg gaccggactg
     2161 gggctggcga tttcgttcaa gatcgtgcag gctcatggcg gacgcatcga tgtgc
//
LOCUS       DATIKR010000122         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195410, whole genome shotgun sequence.
ACCESSION   DATIKR010000122 DATIKR010000000
VERSION     DATIKR010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195410"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..>1735
                     /locus_tag="VLL76_01855"
     CDS             63..>1735
                     /locus_tag="VLL76_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV28263.1"
                     /translation="MALVVMLLGILLWMLHRNETEEERHGLIKDILWVEQNLNFTLVS
                     VEEKLSHLSGELSAGLTAQQFDFQARALLSNNPAMERVLVLGADGALDAAVPPLDGLP
                     ANDGERATAFTKARSMGKPAWTPAMAVPGRGTVVEVHAPLYRDRKFAGMVVGVFSLDG
                     LLVHNVPWWVVEKYKVEIVDGNGGAVAARTSVDLAQPGLSHQVRFEPPGHGMGLVATV
                     YRSGPTLVRNVLAASIFGLTVLALSSLWAVRRHVRHRLEAELALREEHAFRKAMEDSL
                     TVGMRARDLDGRITYVNPAFCRMVGWSEDELVGMAPPMPYWLPEAMDSTMEMHRRVLR
                     GDAPPNGFEIQFRRRDGEVFWALVYEAPLIDSSGRHTGWMASVLDVTERKQAEEMARL
                     QQEKLQRTSRLITMGEMASTLAHELNQPLSAIASYNTGCLNKLASGAFAASELQQAMT
                     KLGVQAQRAGQIIRRVHDFVRKAEPNLQPCSINEVVEDSLGFIEFDAQKRGVQLEVKL
                     AAADPMVDADRILLEQVLLNLARNGIEAMGATPAGDRRLGVAVDCCAEQV"
BASE COUNT          280 a          570 c          612 g          273 t
ORIGIN      
        1 cgatgagcgc gtccagggga ctacccggta aagcggcgtt tcaagccatg ccggtggtgg
       61 ccatggctct tgtggtcatg ctgctgggta ttcttttgtg gatgctgcac cgcaatgaaa
      121 cggaagaaga gcgccacggc ctcatcaagg acatcctttg ggtcgagcag aacctcaact
      181 tcacgctggt gtcggtcgaa gagaagctga gccatctgtc gggtgaattg tcggccgggc
      241 tgacagcgca gcaattcgat ttccaggccc gcgccctgct gtccaacaac ccggcgatgg
      301 agcgggtgct ggtgctgggg gccgacggcg ccctcgacgc ggcggtgccg ccgctcgacg
      361 ggctgccggc caacgatggt gagcgggcga cggccttcac caaggcgcgg tccatgggca
      421 agccggcctg gaccccggcc atggccgtgc ccggccgcgg cacggtggtc gaggtgcatg
      481 cgccgctgta ccgcgaccgc aaattcgccg gcatggtggt cggggtgttc tcgctggacg
      541 gcctgctggt gcacaacgtg ccgtggtggg tggtcgagaa gtacaaggtc gagatcgtcg
      601 acggcaacgg cggcgcagtg gcagcgcgga catcggtcga cctggcgcaa cccggcctca
      661 gccaccaggt ccggttcgag ccgccgggcc acggcatggg cctcgtcgcc accgtctacc
      721 gcagcggccc cacgctggtg cgcaacgtcc tggcggcgtc gatcttcggc ctgacggtgc
      781 tggcgctgtc gtccttgtgg gcggtgcgcc gccacgtccg ccaccggctc gaggccgaac
      841 tggcgctgcg cgaggaacac gccttccgca aagccatgga ggattcgctg accgtgggca
      901 tgcgggcccg cgacctcgac ggccgcatca cctacgtcaa cccggccttc tgccgcatgg
      961 tggggtggtc cgaggacgag ttggtgggga tggcgccgcc catgccctat tggctgcccg
     1021 aggccatgga cagcaccatg gagatgcacc gccgcgtgct gcgcggcgac gcaccgccca
     1081 acggcttcga gattcagttc cgccgccgcg acggcgaggt gttctgggcg ctggtctacg
     1141 aggcgccgct gatcgattcc agcgggcgcc acaccggctg gatggcgtcg gtgttggacg
     1201 tcaccgagcg caagcaggcc gaggagatgg cgcggctgca gcaggaaaag ctgcagcgga
     1261 catcgcgcct gatcaccatg ggcgaaatgg cctcgacgct ggcgcacgag ctgaaccagc
     1321 cgctgtcggc catcgccagc tacaacaccg gctgcctcaa caagctggcc tcgggtgcct
     1381 tcgccgccag cgaactgcag caggcgatga ccaagctggg cgtgcaggcc cagcgcgccg
     1441 gccagatcat ccgccgcgtg cacgatttcg tgcgcaaggc cgaacccaac ctgcagccct
     1501 gttccatcaa cgaggtggtc gaggattccc tcggcttcat cgaattcgac gcccagaagc
     1561 gcggcgtcca gctcgaggtc aagctggcgg cggccgatcc catggtggac gccgaccgca
     1621 tcctgctgga acaggtgctg ttgaacctgg cgcgcaacgg catcgaggcc atgggggcga
     1681 cgcccgccgg cgaccggcgt ctgggcgtcg cggtcgattg ctgtgccgaa caggt
//
LOCUS       DATIKR010000123         1941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_183087, whole genome shotgun sequence.
ACCESSION   DATIKR010000123 DATIKR010000000
VERSION     DATIKR010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183087"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..588)
                     /locus_tag="VLL76_01860"
     CDS             complement(169..588)
                     /locus_tag="VLL76_01860"
                     /inference="COORDINATES: protein motif:HMM:NF020455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CVNH domain-containing protein"
                     /protein_id="HSV28264.1"
                     /translation="MKKMLLAAAVAALFAVPALAANPPAGSYQKTCSNVAYDGTNLTA
                     SCKTFNGAANSTSLQYPTSCIGDIGNVNGVLACAGPNGSYALTCRNLTVAGTTLQGEC
                     QKRDGSWIPASLPNFQGFQGAITNCNGALQNGGQCSQ"
     gene            777..1361
                     /locus_tag="VLL76_01865"
     CDS             777..1361
                     /locus_tag="VLL76_01865"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017773629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HSV28265.1"
                     /translation="MIVDDKALDVMFRDARTHSKWQDRPVAEDLLRRAWDLAALGPTS
                     ANCEPARIVFVRSRDAKERLKPALAAGNVDKTMAAPVTAIIAHDLQFHDKLPKLFPHT
                     DARSWFAGNQPLIETTAFRNGTLQAAYFILALRAMGLDCGPMSGFDNAKVDAEFFAGT
                     PVRSNFLINIGYGDAGALHGRSPRLEFDEACRIV"
     gene            complement(1358..1849)
                     /locus_tag="VLL76_01870"
     CDS             complement(1358..1849)
                     /locus_tag="VLL76_01870"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HSV28266.1"
                     /translation="MMAGSHVVMGAALWAVSAKLAGAPPAEPQALAAAAFGALLPDID
                     HPQSWAGRKMRVVSVPLALVVGHRGITHSALAVAGCLAVLVVMGMGWVAAPVVLGYLS
                     HLLADGLTPSGVPLLWPSRRRFTLNLCRTGGVAEIAIVAAVAAAGGWALGIDFAHLPR
                     PRL"
BASE COUNT          340 a          661 c          641 g          299 t
ORIGIN      
        1 cccttgcctc ccgcggcatc agccgcgcgg ccccttgggc ctaaccgtgt cccgatgagt
       61 tctcatcatc gggacacggt attaaacgaa aagtccccgg ccgggggggc cggggacttc
      121 gctggaacgg ggcgagggga tgccccgatc aggcggcggg acgcctgatt actgcgagca
      181 ctgaccgccg ttctgcaggg cgccgttgca gttggtgatg gcgccctgga agccctggaa
      241 gttgggcagc gaggcgggga tccacgaacc gtcgcgcttc tggcactcgc cctgcagggt
      301 ggtgccggcc acggtcaggt tgcggcaggt cagggcgtag gagccgttgg ggccggcgca
      361 ggccagcacg ccgttgacgt tgccgatgtc gccgatgcag gacgtcgggt attgcagcga
      421 cgtgctgttg gcggcgccgt tgaaggtctt gcacgaggcc gtgaggttcg tgccgtcata
      481 ggcgacgttg gaacaggtct tctgatacga accggccggc gggttggcgg ccagggcggg
      541 aacggcgaac agggcggcca cggcggcggc caaaagcatc ttcttcataa ggtttccccc
      601 ttgttgcatg aatgcaaccc ccacaggttg cagacggcga gattagccga ctgcggcagc
      661 gtgcgcgagt ctttttatcg cgtcatggtt gtctgtgcgt aacccggtcc gtttccccct
      721 attccttcgc gccatcgtga ttacattagg ggaaccacca tggacgagag gcaggcatga
      781 tcgtcgacga caaggccctg gacgtaatgt tccgcgacgc gcgaacccat tcgaaatggc
      841 aggaccggcc ggtggccgag gacctgctgc gccgggcgtg ggacctggcc gcgctggggc
      901 cgacctcggc caattgcgag ccggcacgca tcgtgttcgt ccgcagccgc gatgccaagg
      961 aacggctgaa gccggccctg gccgcaggca acgtcgacaa gaccatggcg gcgccggtca
     1021 ccgccatcat cgcccacgac ctgcaattcc acgacaagct gcccaagctg tttccccaca
     1081 ccgacgcacg gtcgtggttc gccggcaacc agccgctgat cgagaccacg gcctttcgca
     1141 acggcaccct gcaggccgcc tatttcatcc tggcgctcag ggccatggga ctggattgcg
     1201 gccccatgag cggcttcgac aacgccaagg tggacgcgga attcttcgcc ggcacgccgg
     1261 tgcgctcgaa tttcctgatc aacatcggct atggcgacgc cggcgccctg cacggccgct
     1321 cgccccgcct ggagttcgac gaggcctgcc ggatcgtcta aagccggggg cgcggcaggt
     1381 gggcgaagtc gatcccaagc gcccagccgc ccgccgccgc cacggcggcg acgatggcga
     1441 tctcggccac gccgccggtg cggcacagat tgagggtgaa gcgtcggcgc gacggccaca
     1501 gcagcggcac gcccgacggc gtcaggccat cggccagcag gtgcgacagg tagcccagga
     1561 ccaccggcgc cgccacccat cccattccca tcaccaccag caccgccagg cagcccgcca
     1621 ccgccagcgc cgaatgagtg attccgcgat ggccgaccac cagggccagc ggcaccgaga
     1681 cgacgcgcat cttgcgcccg gcccaggatt gcggatggtc gatgtcgggc agcagcgcgc
     1741 cgaacgcggc cgccgccaga gcctgcggct cggccggcgg cgccccggcc agcttggcgg
     1801 acaccgccca cagcgccgcc cccatcacca catgcgatcc cgccatcatt ttttaaagct
     1861 gcctgtcaca agaagctaat gcgtgcagac tgctacatca gtcttatgga aattgcaaac
     1921 agcctagcgt aaactcccga c
//
LOCUS       DATIKR010000124         3491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_98594, whole genome shotgun sequence.
ACCESSION   DATIKR010000124 DATIKR010000000
VERSION     DATIKR010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3491
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98594"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VLL76_01875"
     CDS             complement(<1..567)
                     /locus_tag="VLL76_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28267.1"
                     /translation="MVGEGKGFFLKPGVLSRAEAPTRVAAGKAVVLGTIADLRRRLSR
                     SSAPEAVVTWFNAALGSATFSIELDRWMRQAFSAKATIYDKFMDAEYIRTHVGGGYHR
                     LFDGGHDCLGAWDQCREAAGAAGDSFTAEVLGYAGGLWKDLVTPMGLPVMTFDKADFD
                     QVAGALQDTLGITRAWVADAASFTSTELL"
     gene            complement(855..1730)
                     /locus_tag="VLL76_01880"
     CDS             complement(855..1730)
                     /locus_tag="VLL76_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV28268.1"
                     /translation="MLDYDFPLWRPPSEGSNLIIQATLGCRFNQCTFCSMYKVKDYVE
                     RPVDAVFADIDRAATQWPTAHRVFLADGDAYVLPTEHLAAICDRLKERLPLLQRVSAY
                     ATPFNILKKSVEEIRLLKEKRLNLVYLGIESGSDLLLKKIAKGSAKQMEQALLRAAEA
                     GLKVSATVITGLGGKAHWQEHMDATADLINRAPVTYLSTLQLGLEDEVAPRFFERFGE
                     KFEWQDDRGVLLELKRLVERLDPPQPVIFRSNHASNALALAGTLPKDRAKILDQIDQA
                     LAGYRELRPSWARGL"
     gene            complement(1732..3102)
                     /gene="gor"
                     /locus_tag="VLL76_01885"
     CDS             complement(1732..3102)
                     /gene="gor"
                     /locus_tag="VLL76_01885"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HSV28269.1"
                     /translation="MAKYDFDLFVLGAGSGGVRASRLASQLGVSVAVAEESRVGGTCV
                     MRGCVPKKLLVYGAHFAEDIADSAGFGWTIENVSFDWARLIAAKNAELNRLEAVYNRI
                     LRDNGVHLVEGRGRLLDPHTVEVAGARYTADRILVATGGRPVLPNVPGIEHAITSNEA
                     LDLMQLPERMVIVGGGYIAVEFAGIFNALGVKVTQILRGDTVLRGFDQDIRATLAEEM
                     VAKGIDLRTETNVRSIEKAGRGYSLRLSGDETLETDLVMYATGRRPNTDGLGLVEAGV
                     ELNRSGAVVVDEYSRSSVDNIYAVGDVTDRMNLTPVALAEARALVNTLYLDKPMTMDY
                     DTIPTAVFSMPPVGTVGLAEHEARARGLEIDVYLSRFKPMRNTLAGRDERTMMKMIVD
                     RASDRVLGIHMVGPDAAEITQGFGVALKCGATKAQLDATIGIHPTAAEELVTMRDRRP
                     DPVLEE"
     gene            complement(3151..>3491)
                     /locus_tag="VLL76_01890"
     CDS             complement(3151..>3491)
                     /locus_tag="VLL76_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FliG C-terminal domain-containing protein"
                     /protein_id="HSV28270.1"
                     /translation="RESAEKIKALMFTFEDLVRIDAAGIQTLLRQVEKDKLALALKGA
                     SDAIKDLFFKNMSERAGKMLREDMEAMGPVRLRDVDQAQSAIVAIAKELAASGQIVIS
                     EGREEDELVY"
BASE COUNT          568 a         1165 c         1158 g          600 t
ORIGIN      
        1 aagaagctcg gtcgacgtga acgaggcggc gtcggccacc cacgccctgg tgatccctaa
       61 agtgtcctgg agcgcgccag cgacttggtc gaaatcggct ttatcgaacg tcatgaccgg
      121 caaccccatg ggggtaacca ggtccttcca taagccgccg gcatagccaa ggacttccgc
      181 cgtaaaactg tcgccggcgg caccggcagc ttcacggcac tggtcccacg cgccaagaca
      241 atcgtggcca ccgtcgaaca gccggtgata tcccccgccg acgtgggtcc ggatatattc
      301 ggcatccatg aacttgtcgt agatcgtcgc cttggcggag aacgcctgac gcatccaccg
      361 atcgagttcg atgctgaacg tggcactgcc caaggctgca ttgaaccagg tgaccaccgc
      421 ttccggcgcc gacgaacggc ttaagcgccg ccggagatcg gcgatggtgc ccaagacaac
      481 ggctttgccc gcagcgacgc gcgtaggagc ttcggcacgg gacaggacac cgggcttcag
      541 aaagaatcct ttgccctcac cgaccatgct ccgccccccc cgcacgtaga gagggaaata
      601 ataacgccgg ggagagaatt gtctactcgg gctctcaggc ccgggatcac tcgttgccac
      661 cacccggcgc gccctgaccg ccctgacagt ggccgacatg gtgggttaat ctgacgccct
      721 gcctggcggc gcatgcccct ccctaaccca accatgctcc ctcccccggc gccgccgggg
      781 gagggttggg gtgggggccg agcggagcga gtttgggcgg caccgtgccg gcggcgccat
      841 gccctattat gctcctacag cccccgcgcc caactcggcc tcaattcccg atatcccgcc
      901 agcgcctggt cgatctggtc caggatcttg gccctgtcct tgggcagggt gccggccagg
      961 gccagggcgt tgctggcgtg gttggagcgg aagatcaccg gctggggcgg gtcgaggcgt
     1021 tcgaccaggc gcttgagttc cagcagcacg ccgcgatcgt cctgccactc gaacttctcg
     1081 ccgaagcgct cgaagaagcg cggcgcgacc tcgtcctcca ggcccagttg cagggtcgag
     1141 agataggtga cgggggcgcg gttgatcagg tcggcggtgg cgtccatgtg ctcctgccag
     1201 tgggccttgc cgcccaggcc ggtgatgacg gtcgccgaca ccttgaggcc ggcctcggcg
     1261 gcgcgcagca gcgcctgttc catctgcttg gcgctgccct tggcgatctt cttcaacagc
     1321 aggtcagagc cggattcgat gccgagatag accaaattca gccgcttctc cttgagcagc
     1381 cggatctctt cgaccgactt cttgaggatg ttgaacggcg tggcataggc cgacacccgc
     1441 tgcagcagcg gcaagcgctc cttcaggcgg tcgcagatgg cggccagatg ctcggtcggc
     1501 aggacatagg cgtcgccgtc ggccaggaac acccgatggg cggtgggcca ttgcgtcgcg
     1561 gcccggtcga tgtcggcgaa caccgcgtcg accgggcgct cgacatagtc cttcaccttg
     1621 tacatcgagc agaaggtgca ttggttgaag cggcagccca gcgtcgcctg gatgatcagg
     1681 ttgctgcctt ccgacggcgg ccgccacagg gggaaatcgt aatccagcac cctattcctc
     1741 cagcaccggg tcgggccgcc tgtcgcgcat ggtcaccaat tcctcggcag cggtggggtg
     1801 gatgccgatg gtggcgtcca actgcgcctt ggtcgccccg catttcagcg cgacgccgaa
     1861 gccctgggtg atctcggcgg cgtcggggcc gaccatgtgg atgcccagca cgcggtcgct
     1921 ggcgcggtcc acgatcatct tcatcatggt ccgctcgtcg cggccggcca gggtgttgcg
     1981 catgggcttg aagcgcgaca ggtagacgtc gatctccagc ccgcgcgccc gcgcctcgtg
     2041 ctcggccaag cccaccgtgc cgaccggcgg catgctgaac accgccgtcg ggatcgtgtc
     2101 gtaatccatg gtcatgggct tgtccaaata cagcgtgttg accagggcgc gcgcctcggc
     2161 cagggcgacc ggcgtcaggt tcatgcgatc ggtgacgtcg ccgacggcgt agatgttgtc
     2221 caccgaactg cgcgagtatt cgtccaccac cacggcgccc gagcggttca gttcgacccc
     2281 ggcctcgacc aggcccagcc cgtcggtgtt ggggcggcgg ccggtggcgt acatcaccag
     2341 atcggtctca agcgtttcgt cgcccgacag gcgcagggaa tagccgcgcc cggccttctc
     2401 gatgctgcgc acgttggtct cggtgcgcag gtcgatgccc ttggccacca tttcctcggc
     2461 cagggtggcg cggatgtcct ggtcgaagcc gcgcagcacg gtgtcgccgc gcaggatctg
     2521 cgtcaccttg acgcccaggg cgttgaagat gccggcgaat tccacggcga tgtagccgcc
     2581 gccgacgatg accatccgct cgggcaattg catcaggtcc agcgcctcgt tcgaggtgat
     2641 ggcgtgctcg atgccgggca cgttgggcag caccgggcgg ccgccggtgg cgaccaggat
     2701 gcggtcggcg gtatagcggg cgccggcgac ctccaccgtg tggggatcga gcaggcgccc
     2761 ccggccctcg accagatgga cgccgttgtc gcgcaggatg cggttgtaga cggcctccag
     2821 ccggttcagc tcggcgttct tggcggcgat caggcgggcc cagtcgaacg acacgttctc
     2881 gatggtccag ccgaagccgg cggaatcggc gatgtcctcg gcgaaatggg cgccatagac
     2941 caacagcttc ttggggacgc agccgcgcat gacgcaggtg ccgccgaccc ggctttcctc
     3001 ggccaccgcg acggagacgc ccagttgcga tgccagccgc gacgcccgca ctccgcccga
     3061 gccggcgccc aggacgaaca ggtcgaagtc gtacttggcc atggaaccct ccgcttgcct
     3121 gccgacaaag gtagcgcgcg gcaggggcga ttaatagacc agctcgtctt cctcgcggcc
     3181 ctcggagatg acgatctggc ccgaggcggc cagttccttg gcgatggcga cgatggccga
     3241 ctgcgcctgg tcgacgtcgc gcaggcggac cgggcccatg gcctccatgt cctcgcgcag
     3301 catcttgccg gcgcgttcgg acatgttctt gaagaacaga tccttgatgg cgtcggaagc
     3361 gcccttgagc gccagggcca gcttgtcctt ttccacctga cgcagcaggg tttggatacc
     3421 ggcggcgtcg atgcgcacca gatcctcgaa ggtgaacatg agggccttga tcttctcggc
     3481 gctttcgcgg t
//
LOCUS       DATIKR010000125         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_171316, whole genome shotgun sequence.
ACCESSION   DATIKR010000125 DATIKR010000000
VERSION     DATIKR010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171316"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /gene="pth"
                     /locus_tag="VLL76_01895"
     CDS             complement(<1..362)
                     /gene="pth"
                     /locus_tag="VLL76_01895"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HSV28271.1"
                     /translation="MLLVVGLGNPGTEYARNRHNIGFMAADELVRRHSFGPWRAKFQG
                     EVAEGMIGGEKVLALKPMTYMNLSGQSVAQAARFLKIPVDDVIVLHDELDLPPGRLRV
                     KRGGGAGGHNGLKSIDQHL"
     gene            complement(364..969)
                     /locus_tag="VLL76_01900"
     CDS             complement(364..969)
                     /locus_tag="VLL76_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HSV28272.1"
                     /translation="MTEVSAIVAELRDRAGKGAARATRREGKVPAVIYGAKQDPVCIA
                     LDPRAVWAELNKGGFTTRLFDVDLGKGGKHRCLARDVQFHPVTDQPMHVDFMRVSADH
                     VVHVKVPVHVINQDKAPGVKRGGVVNIELHEVEVTCSPDLIPKELVVDLAGLDIGAAI
                     HVNQLGLPKGVKPYHVGEEQTVVTIAPPTVRAETEAAATEA"
     gene            1086..>1525
                     /locus_tag="VLL76_01905"
     CDS             1086..>1525
                     /locus_tag="VLL76_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011605458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSV28273.1"
                     /translation="MTDDRLTRQLGFVLELDKLKTILRQTLLIDSSRRENDAEHSWHV
                     AAMAVLLAEYAPPGADPLRASRMLLFHDVVEIDAGDTFIHDDAGNASKAAREQAAAER
                     LYGLLPRDQADEFRALWQEYEDRATATARFADALDRLQPIMNNFA"
BASE COUNT          244 a          520 c          506 g          255 t
ORIGIN      
        1 aggtgctggt cgatgctttt cagcccgtta tggccgccgg caccgccgcc gcgcttgacc
       61 ctcaggcggc cggggggcag gtcgagctcg tcgtgcagca cgatgacgtc gtccaccggg
      121 atcttgagga agcgggccgc ctgggccacc gactggccgg acaggttcat gtaggtcatc
      181 ggcttcagcg cgagaacctt ctcgccgccg atcatgcctt cggccacttc gccctggaac
      241 ttggcgcgcc aggggccaaa ggaatggcgg cggacgagtt cgtccgccgc catgaagccg
      301 atgttatgcc ggttcctggc gtattcggtc ccgggattgc ccagtccgac caccaggagc
      361 acgtcaggcc tcggtagccg cagcctcggt ctcggcgcgc acggtcggcg gcgcgatggt
      421 gaccacggtc tgctcttcgc ccacgtgata gggcttgacg cccttgggca ggcccagctg
      481 gttgacgtgg atggcggcgc cgatgtccag gccggccagg tcgaccacca gctccttcgg
      541 aatcagatcc ggcgagcagg tgacttccac ttcgtgcagc tcgatgttga cgacgccgcc
      601 gcgcttcacg cccggggcct tgtcctggtt gatcacgtgc accggcacct tgacgtgcac
      661 cacgtggtcg gccgagacgc gcatgaaatc cacatgcatc ggctggtcgg tgaccgggtg
      721 gaactggacg tcacgggcca ggcagcgatg cttgccgccc ttgccgaggt cgacgtcgaa
      781 caggcgggtg gtgaagccac ccttgttcaa ctcggcccac acggcgcggg gatcgagggc
      841 gatgcacacg gggtcctgct tggcgccgta gatcacggcg ggaaccttgc cttcacgacg
      901 agtggcccgg gcggccccct ttccggcccg gtcgcggagc tcggcgacaa tggcggagac
      961 ttcggtcatt ggtattctcc aattgctaaa agcgcggcct ccaggggtgc cgcgccgaag
     1021 ggggatgctt tacaccggca cggccccatg ttcaacctga ttcccgcatg tggtagagaa
     1081 tgccgatgac cgacgaccgc cttacccgcc agctcggctt cgtgctggaa ctggacaagc
     1141 tcaagaccat cctgcgccag acgctgctga tcgattcgtc gcggcgcgag aacgacgccg
     1201 agcattcctg gcacgtcgcc gccatggcgg tgctgctggc cgaatacgcc ccacccggcg
     1261 ccgacccgct gcgcgcctcg cgcatgctgc tgttccacga cgtggtcgag atcgacgccg
     1321 gcgacacctt catccacgat gacgccggca acgccagcaa ggccgcccgc gagcaggcgg
     1381 cagccgaacg gctgtacggc ctgctgccgc gcgaccaggc ggacgagttc cgcgccctgt
     1441 ggcaggaata cgaggaccgc gccaccgcca cggcccgctt cgccgatgcg ttggaccggc
     1501 tgcagccgat catgaacaat ttcgc
//
LOCUS       DATIKR010000126         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_207604, whole genome shotgun sequence.
ACCESSION   DATIKR010000126 DATIKR010000000
VERSION     DATIKR010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207604"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..499
                     /gene="hypA"
                     /locus_tag="VLL76_01910"
     CDS             155..499
                     /gene="hypA"
                     /locus_tag="VLL76_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008901 - ferredoxin hydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HSV28274.1"
                     /translation="MHEMSLTEVVVRILEDQAAQHGFTKVKTVWLEIGELSHVDPESM
                     LFCFGAVAKGSPVAAEAKMEIVRVQGQAWCLDCAESVTIAKRYDPCPKCGGFGLTVTA
                     GEEMRVKEMEVE"
     gene            500..1381
                     /gene="hypB"
                     /locus_tag="VLL76_01915"
     CDS             500..1381
                     /gene="hypB"
                     /locus_tag="VLL76_01915"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_039806904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0051604 - protein maturation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HSV28275.1"
                     /translation="MCTVCGCGDSKVEHDHHHHHGHDHHHDHGHDHHHHHDGDVHFGT
                     GIAGVHVPGLSQTRILQIEQDILGHNNDHAGRNRAWLAERGIFALNLVSSPGSGKTTL
                     LCRTVRELMGKFPCAVIEGDQQTSNDADRIRETGAPAIQVNTGKGCHLDAHMVETALQ
                     RLAPADDSVLFIENVGNLVCPAAFDLGEAYKVAILSVTEGEDKPLKYPDMFHAAGMMI
                     LNKTDLLPHLDFDVEQCIANARRVNPDIVVLQLSARTGEGMDEWLAWISEGRRRAVKQ
                     RIGALEAKLAAAKASLG"
     gene            1378..>2300
                     /locus_tag="VLL76_01920"
     CDS             1378..>2300
                     /locus_tag="VLL76_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation protein HypF"
                     /protein_id="HSV28276.1"
                     /translation="MIPLPRPVPPVLAVGAFLKNTICVTRGAEAFLSPIHGDLGTPEA
                     IAAFEASVEAMLRDLGVTPVRVAHDLHPDFHSTRFAQSLDIPQVPVQHHHAHAAAIAA
                     EHGHDAPILGLSLDGFGLGPANQSWGGELLYCDGPSYRRLGHLALLAQPGGDVAAREP
                     WRMAAAALHRMGRGGEIADRFRDQRPAAMLATILDKGLNSPPTSSAGRLFDAACGLLG
                     VHPVSEFEGQAPMALEKMVTAPAVMADGWTIEDGVLDLLPLLQRLAACESAALGANLF
                     HGTLIAALAEWCGWTAKESGVRTVALGGGCF"
BASE COUNT          378 a          811 c          765 g          346 t
ORIGIN      
        1 agatcctggc gccgacggaa tggaacttcc acccccaggg accgctggtg cgcggcctcg
       61 agggcgcacc cgccgatgcg gagcttgagc gcaaggccag gctgctggtg cacgcgctgg
      121 acccctgcgt ggcctgttcg gtgacggtgg aataatgcac gagatgtcgc tgaccgaagt
      181 cgtcgtccgc atcctggaag accaggcggc gcagcacggc ttcaccaagg tcaagacggt
      241 gtggctggaa atcggcgaac tttcccacgt ggaccccgag tccatgctgt tctgcttcgg
      301 cgccgtcgcc aagggctcgc ccgtggcggc cgaggccaag atggaaatcg tgcgggtgca
      361 gggtcaggcc tggtgcctcg attgcgcgga gagtgtgacc atcgcgaagc gctatgatcc
      421 ctgcccgaaa tgcggcggct tcggcctgac cgtcaccgcc ggcgaggaaa tgcgggtcaa
      481 ggaaatggag gtcgagtaga tgtgcacggt ctgcggctgc ggcgactcca aggtggaaca
      541 cgaccaccat caccaccatg ggcatgatca tcaccacgac catgggcacg accaccatca
      601 ccaccacgac ggcgacgtcc atttcggcac cggcatcgcc ggcgtgcacg tgcccggcct
      661 cagccagacc cgcatcctgc agatcgagca ggacatcctg ggccacaaca acgaccatgc
      721 cggccgcaac cgcgcctggc tggccgagcg cggcatcttc gcgctgaacc tggtctccag
      781 ccccggctcg ggcaagacca ccttgctgtg ccgcaccgtg cgcgagctga tgggcaagtt
      841 cccctgcgcc gtcatcgagg gcgaccagca gaccagcaac gacgccgacc gcatccgcga
      901 gaccggcgcg ccggccatcc aggtcaacac cggcaagggc tgtcacctcg acgcccacat
      961 ggtcgagacg gcgctgcaac gcctggcccc ggccgacgat tcggtgctgt tcatcgagaa
     1021 tgtcggcaac ctggtgtgcc ccgccgcctt cgacctgggc gaggcctaca aggtggcgat
     1081 cctgtcggtg accgagggcg aggacaagcc gctcaaatac cccgacatgt tccacgccgc
     1141 cggcatgatg atcctcaaca agaccgacct gctgccgcat ctggatttcg acgtcgagca
     1201 gtgcatcgcc aacgcccgcc gggtcaaccc cgacatcgtc gtgctgcaac tctcggctcg
     1261 caccggcgag ggcatggacg aatggctggc ctggatcagc gagggccgca ggcgcgcggt
     1321 caagcagcgt atcggcgcgc tggaagcgaa gctggcggcg gcgaaggcga gtttgggatg
     1381 atccccctgc cccgccccgt cccgcccgtg ctggcggtgg gcgcgttcct caagaacacc
     1441 atctgcgtca ctcgcggcgc cgaggccttc ctgtcgccga tccatggcga tttggggacg
     1501 cccgaggcca tcgcggcgtt cgaagcctcg gtcgaggcca tgctgcggga cttgggcgtc
     1561 accccggtgc gggtcgccca cgacctccac ccggactttc actccacccg tttcgcccag
     1621 agcctggaca tcccccaggt tccggtgcag caccaccacg cccacgccgc cgccatcgcc
     1681 gccgagcacg gtcacgacgc accgatcctg ggcctgtcgc tggacggctt cggcctgggg
     1741 ccggccaacc aatcctgggg cggcgaattg ctttattgcg acggcccgtc ctatcgccgc
     1801 ctcgggcatc tcgccctgct ggcgcagccg ggtggcgacg tggcggcgcg tgagccgtgg
     1861 cgcatggccg ccgccgccct gcaccgcatg ggacgcggtg gcgagatcgc cgaccggttc
     1921 cgcgaccaac gcccggcggc catgctggcg accatcctgg acaaggggct gaacagtccg
     1981 cccacctcgt cggccggccg gctgttcgac gccgcctgcg gcctgctggg cgtgcatcca
     2041 gtgtccgagt tcgagggcca ggcgcccatg gcgctggaga agatggtcac cgcgcccgcc
     2101 gtcatggcgg acggctggac gatcgaggac ggcgtgctcg acctgctgcc actgctgcaa
     2161 cggctggccg cttgcgaaag cgccgccctt ggtgccaacc tgttccacgg caccctgatc
     2221 gcggcgctgg ccgaatggtg cggatggacg gccaaggaaa gcggcgtgcg cacggtagcg
     2281 ttaggcggcg gctgcttctt
//
LOCUS       DATIKR010000127         2295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_231793, whole genome shotgun sequence.
ACCESSION   DATIKR010000127 DATIKR010000000
VERSION     DATIKR010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231793"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="VLL76_01925"
     CDS             complement(<1..535)
                     /locus_tag="VLL76_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019540848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV28277.1"
                     /translation="MFAAVLRTVTICALLAAPAVAQEDRREVPYVPTPDEVVQSMLTL
                     AGVGPDDYVVDLGSGDGRIVVAAARDFGAQGIGVDKNPVRIREANANAAEANVTDRVR
                     FVEGDLFDADISKATVVTMYLLPEVNLAMRPRILGELKPGTRVVSHDFDMGDWRPDKR
                     MKVPDEGSDVYLWVVPAH"
     gene            739..1506
                     /locus_tag="VLL76_01930"
     CDS             739..1506
                     /locus_tag="VLL76_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28278.1"
                     /translation="MKKFKDSIAGTAVAGPHLPVVHTTSAFAFDGIAETGLLEADDCN
                     VYVGEKLLYFFYGRPAFRPNYGDKTTGQDQFAPVCLVMRADVAAAPRRVMPLDSGAFA
                     NRIMSDYHHPKMKKEGFELPPDLDSTRQVIGVYFNGSNSHYYEQDGASPATRDKRNWY
                     VETYVSLIDRKAANVGDGRLTAIEIQLDKDVTLAGNVLAVALPHRLWEDPEIQALIKG
                     WGAKELVYRIDTKFRPNEACAKIEDVVRDYLEDQGLL"
     gene            1575..>2295
                     /locus_tag="VLL76_01935"
     CDS             1575..>2295
                     /locus_tag="VLL76_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28279.1"
                     /translation="MVPVFRSRASNLPLIQIAGDDDVVVGFTECDVDYRPLDDGPITA
                     AGQPLVYAFLAADGGILAGTRPVLAQHLAPMVDDGTLDAQPMTRAEIAEFCGMQDRLR
                     ILFPAAFDYLARTGCPETAWRWKIHSTITPALRSAVAARLRRLGENEGAVARLCRSIR
                     VRRTENGLRATIDIPPGSAGNPIEVLERQLADPALFGEAAAYWADLEGLRPEIRRNTV
                     AEKRLGSLDIGLNAIGERSPWI"
BASE COUNT          401 a          767 c          747 g          380 t
ORIGIN      
        1 catgggccgg caccacccac aggtacacgt cgctgccctc gtccggcacc ttcatccgct
       61 tgtcgggccg ccagtcgccc atgtcgaaat catgcgacac cacccgcgtg cccggcttca
      121 actcgcccag gatgcggggc cgcatggcca ggttgacctc gggcagcagg tacatggtca
      181 ccaccgtcgc cttgctgatg tcggcgtcga acaggtcgcc ctcgacgaag cggacccggt
      241 cggtgacgtt ggcctcggcg gcgttggcgt tggcctcgcg gatgcggacc gggttcttgt
      301 cgacgccgat gccctgggca ccgaaatccc gcgccgccgc caccacgatg cggccgtcgc
      361 cggaccccag gtcgaccacg taatcatccg gccccacgcc ggccagcgtc agcatggact
      421 ggaccacctc gtcgggggtc ggcacgtagg gcacctcgcg ccggtcctcc tgggcgacgg
      481 cgggcgccgc cagcagggcg cagatggtga cggtccgaag cacggcggcg aacatggcat
      541 cctccggttc gattgctgtc gggcagggaa cacgccaagc ccgccccgcg tttccatgcg
      601 cgattcacga agccgggata gccagcttct gcatgacgcg ccggctgtgg acgggccgaa
      661 ggggctgatc gagcggggta gaaaaggaca agaccgcctg ctacggttgc attcgcgcaa
      721 tcatggcagg aggcaggcgt gaagaagttc aaggacagta tcgccggcac tgcggtggcg
      781 ggtccccact tgccggtcgt gcacacgacc tcggccttcg ctttcgatgg catcgccgaa
      841 actgggctcc tcgaggccga tgactgcaac gtctatgtcg gcgagaagct gctttatttc
      901 ttctacggtc ggcctgcgtt tcgaccgaat tatggcgaca agaccaccgg ccaggatcaa
      961 ttcgcgcccg tctgcctggt gatgcgtgcc gacgtggccg ctgccccacg ccgggtgatg
     1021 ccgctcgaca gcggcgcctt cgcgaatcgg atcatgagcg attaccacca tccgaagatg
     1081 aagaaggaag gcttcgagct gccgccggac ctggacagca cgcgccaggt catcggagtc
     1141 tatttcaacg gctcgaattc ccattactac gaacaggacg gcgcatcccc cgccacgcga
     1201 gacaagcgca actggtacgt ggaaacctat gtcagcctga tcgaccgcaa ggccgccaac
     1261 gtgggcgatg gccgcttgac cgccattgag attcagctcg acaaggatgt caccctggcc
     1321 ggcaacgtgc tggcggtcgc cctgccgcac cggctgtggg aagaccccga gatccaggcg
     1381 ttgatcaagg gctggggagc caaggaattg gtgtaccgca tcgacacgaa gttccgcccc
     1441 aacgaagcct gcgccaagat cgaggacgtc gttcgcgatt atctcgagga ccagggcctg
     1501 ctgtgatgag ccgggattat ggcgaggcct ggatggtcgg ggcgtttgcg ccctgcatcc
     1561 gccccaacga cttcatggtg ccggtcttcc gctcgcgcgc cagtaacctg ccgctgatcc
     1621 agatcgccgg cgacgatgac gtggtcgtcg gcttcaccga atgcgacgtt gattatcggc
     1681 cgctggacga tggtccgatc actgcagccg gacagccgct ggtctacgcg ttccttgccg
     1741 ccgacggagg cattctggcg gggacgcgcc cggtgctcgc ccagcatctg gcgccgatgg
     1801 tcgatgacgg gacgctggac gcccagccca tgacccgcgc cgaaatcgcc gaattctgcg
     1861 gcatgcagga tcgcctgcgc attctgtttc cggccgcctt cgactatttg gcccgcaccg
     1921 gctgtccgga gaccgcatgg cgatggaaga tccactcgac catcaccccg gcgctgcgca
     1981 gcgccgtcgc cgcgcggttg cgccggcttg gcgagaacga gggcgcggtg gcacgcctgt
     2041 gccgctcgat ccgggtaagg cgcacggaga acggcctgcg cgccaccatc gacatcccgc
     2101 ccgggtccgc cggaaacccg atcgaagtgc ttgaacgcca attggccgac ccggccctgt
     2161 tcggcgaggc cgccgcctat tgggcggatt tggaagggct gcgcccggaa atccggcgca
     2221 acacggtcgc agagaaacgc ctgggcagtt tggacatcgg gctgaacgcc atcggcgaaa
     2281 gatctccctg gatcg
//
LOCUS       DATIKR010000128         1945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195504, whole genome shotgun sequence.
ACCESSION   DATIKR010000128 DATIKR010000000
VERSION     DATIKR010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195504"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(339..1382)
                     /gene="mltG"
                     /locus_tag="VLL76_01940"
     CDS             complement(339..1382)
                     /gene="mltG"
                     /locus_tag="VLL76_01940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HSV28280.1"
                     /translation="MKLVLKTVLALIVLAALAVAGAAWEGHRRFTAPGPLAASGTVFI
                     PKGSGTQAIARLLQQGGVIRDPLVFVAATKLKKANLKAGEYEFAAGVSAEGVMRQMVE
                     GRTLVHKLTVAEGLTVRQVLTLVNGADYLEGDVARLPREGWLLPETWHLSRADDRAEV
                     MARMEKSMRQLLDQLWAGRDPGLPLKSKEEALVLASIVERETGVKAERPRVAAVFLNR
                     LRLGMPLQSDPTVIYGLSDGMGVLDRPLTRADLQTAHPWNTYVNPGLPPTAIANPGRA
                     SLEAVLHPADSDDLYFVADGTGGHVFARTLDQHNANVAAWRKIERQRRGEPEPEPVVP
                     VKKAVPVPAKKRR"
     gene            complement(1521..>1945)
                     /locus_tag="VLL76_01945"
     CDS             complement(1521..>1945)
                     /locus_tag="VLL76_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745380.1"
                     /note="FabF; beta-ketoacyl-ACP synthase II, KASII;
                     catalyzes a condensation reaction in fatty acid
                     biosynthesis: addition of an acyl acceptor of two carbons
                     from malonyl-ACP; required for the elongation of
                     short-chain unsaturated acyl-ACP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HSV28281.1"
                     /translation="PAEDGNGARRAMQAALARAGLKPEDVDYVNAHGTATMGDTIELG
                     AVKQVFGDHSYKLSMSSTKSAIGHLLGAAGAVEAIFCLLAIRDQVAPPTLNLHTPDEG
                     CDIDLVPLKAKKRKIEVAMSNSFGFGGTNASLIFKAAK"
BASE COUNT          284 a          653 c          697 g          311 t
ORIGIN      
        1 agggtcagcg acccgctctc gccgtcgcat ttcaccagca ccgaaatcag agtgtaggcg
       61 cgatcgttac gggtgatcag catcgagcag ccgccgcgct ggaaccggcg ctcgccgttg
      121 ccggtcagca cgctggacaa acgacgataa agcgcttccg tgcccatggg acgagcttag
      181 cgcgatcggg ccggcttcgg gaatcagccg gaggggggag acacctaggg gtggatcgtc
      241 atcccgggcg agcatcgcga gacccgggat ccatgccccg tgcaccacca tggaccccgg
      301 ctcgcgctgc gcttggccgg ggtgacggac ttggatggtc agcgtctctt ctttgccgga
      361 accggcaccg ccttcttgac gggcaccacc ggttccggtt cgggctcgcc ccggcgctgg
      421 cgttcgatct tgcgccaggc ggcgacgttg gcattgtgct ggtccagcgt gcgggcgaag
      481 acgtggccgc cggtgccgtc ggcgacgaaa tagaggtcgt cgctgtcggc cgggtgcagc
      541 accgcctcca ggctggcgcg gcccgggttg gcgatggcgg tgggcggcag gccggggttc
      601 acgtaggtgt tccagggatg ggcggtttgc aggtcggcgc gggtcagcgg ccggtccagc
      661 acgcccatgc cgtcggacag gccatagatc accgtggggt ccgattgcag cggcatgccc
      721 aggcgcaggc ggttgaggaa caccgccgcg acgcgcggcc gttcggcctt gaccccggtc
      781 tcgcgctcga cgatcgaggc cagcaccagc gcctcttcct tgcttttgag cggcaggccg
      841 ggatcgcgtc cggcccagag ctggtcgagc aactggcgca tggacttctc catgcgcgcc
      901 atcacctcgg cgcggtcgtc ggcgcgcgac agatgccagg tctcgggcag cagccaacct
      961 tcgcgcggca ggcgggcgac gtcgccctcc agataatcgg cgccgttgac cagcgtcagc
     1021 acctgccgca cggtcaggcc ctcggccaca gtcagcttgt gcaccagggt gcggccctcg
     1081 accatctgcc gcatcacgcc ttcggcgcta accccggcgg caaactcgta ttcaccggcc
     1141 ttcaggttcg ccttcttcag cttggtggcg gcgacgaaca ccagcgggtc ccggatgacc
     1201 ccgccctgct gcagcagccg cgcgatggcc tgggtgcccg agcccttggg gatgaacacg
     1261 gtgccggacg cggccagcgg ccccggcgcg gtgaagcggc gatgcccttc ccacgccgca
     1321 ccggcgacgg ccagggcagc gaggacgatc agggcgagga cggtcttgag gacgagtttc
     1381 atggggaaat gtgtacccct gccatcgtca tccccgcgaa ggcggggatc catggcgccg
     1441 gcggcacaat tccgccgacc ggttcagccc cccgcccgtg gacccccgcc ttcgcggggg
     1501 tgacggatgg gggcatgccg ttacttcgcc gccttgaaga tcagcgaggc gttggtgccg
     1561 ccgaagccga acgagttgga catcgccacc tcgatcttgc gcttcttggc cttgagcgga
     1621 accaggtcga tgtcgcagcc ctcgtccggc gtatgcaggt tgagggtcgg cggcgccacc
     1681 tggtcgcgga tggcgagcag gcagaagatc gcctcgacgg caccggcggc acccagcagg
     1741 tggccgatgg ccgacttggt cgagctcatg gacagcttgt aggaatggtc gccgaacacc
     1801 tgcttgacgg cgcccagctc gatggtgtcg cccatggtgg cggtgccgtg ggcgttgacg
     1861 taatcgacgt cctcgggctt caggccggcg cgggccagcg cggcctgcat ggcgcggcgg
     1921 gcgccgttgc cgtcctcggc cgggg
//
LOCUS       DATIKR010000129         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_219967, whole genome shotgun sequence.
ACCESSION   DATIKR010000129 DATIKR010000000
VERSION     DATIKR010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219967"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1238
                     /locus_tag="VLL76_01950"
     CDS             <1..1238
                     /locus_tag="VLL76_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AmpG family muropeptide MFS transporter"
                     /protein_id="HSV28282.1"
                     /translation="TVLLLGFSSGLPLALTGATLAVWLTESGIDLKSIGLFALIGVPY
                     TFKFVWAPLVDHLRLPLLTRAFGRRRAWMLATQAALIAALLGLGASDPAADIGTVAIL
                     ALVVAFCSASQDIVIDAYRVEILEQEQYGAGAAAVQFGYRLAMLTSGAGALFLAQYSE
                     SWAVTYAVMAALVGVGMVTVLVNREPKAPALPPKAPGVAGWARHAVLDPFLDMARRQG
                     MMIVAVLAFVLLYKLGDAFAGVMANPFYIKMGFTKAEIASISKVFGFGATIAGTFLGG
                     VLVARYGIVKSLLACGVLQMLSNLMFAWQATVGHDIGALTLTIAVENLSGGMGSAAFV
                     AYMSGLCSLSYTGTQYALLSSLAAVGRTLVASSAGALAQSVGWVDFFVVSTIVAVPGI
                     VLLAVLRRRLVEGPVAAPA"
     gene            1296..>1639
                     /locus_tag="VLL76_01955"
     CDS             1296..>1639
                     /locus_tag="VLL76_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007676639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HSV28283.1"
                     /translation="MRIGVPKEIKTHEYRVGLTPASVRELVSHGHEVTVETKAGEGIG
                     VTDALYQMAGAKVMAGPAEVFAWADMIVKVKEPQPSEYGLLRDGQILFTYLHLAPDRQ
                     QTRALVDSGCIA"
BASE COUNT          214 a          550 c          576 g          299 t
ORIGIN      
        1 tcaccgtgct gctgctgggt ttctccagcg gcctgccgct ggcgctgacc ggcgcgacgc
       61 tggcggtgtg gctgaccgaa tcggggatcg acctcaagtc catcggcctg ttcgctttga
      121 tcggcgtgcc ctacaccttc aagttcgtct gggcgccgct ggtcgaccat ctgcgcctgc
      181 cgctgctgac ccgcgccttc ggccgccgcc gcgcctggat gctggcgacc caggcggcgc
      241 tgatcgcggc gttgctgggc ctgggcgcgt cggaccccgc cgccgacatc ggcacggtgg
      301 cgatcctcgc cctggtggtg gcgttctgtt cggccagcca ggacatcgtc atcgacgcct
      361 accgcgtcga gatactggag caggagcaat acggcgccgg cgcggcggcg gtgcagttcg
      421 gctatcgcct cgccatgctg acctcgggcg cgggcgcgct gtttctggcg caatacagcg
      481 agtcgtgggc cgtcacctat gccgtcatgg cggcgctggt gggcgtgggc atggtcacgg
      541 tgctggtcaa ccgcgagccc aaggcccccg ccttgccgcc caaggcgccg ggcgtggcgg
      601 ggtgggcgcg ccacgccgtg ctcgacccct tcctcgacat ggccaggcgc cagggcatga
      661 tgatcgtcgc cgtgctggcc ttcgtgcttt tgtacaagct gggcgacgcc ttcgccggcg
      721 tcatggccaa cccgttctac atcaagatgg gcttcaccaa ggccgagatc gccagcatct
      781 ccaaggtgtt cggctttggc gccaccatcg ccggcacctt cctgggcggt gtgctggtgg
      841 cgcgctacgg catcgtcaaa agtctgctgg cctgcggcgt gctgcagatg ctgtccaacc
      901 tgatgttcgc ctggcaggcg acggtgggcc acgacatcgg cgccctgacg ctgaccatcg
      961 cggtggaaaa cctgtcgggc ggcatgggct cggccgcttt cgtggcctac atgtcgggcc
     1021 tgtgcagcct cagctatacg gggacgcaat acgccttgct gagttcgctg gccgccgtcg
     1081 gccgcaccct ggtggcgtcg tcggccgggg cgctggcgca atcggtgggc tgggtggact
     1141 tcttcgtggt gtccaccatc gtcgccgtgc ccggcatcgt gctgctggcg gtgctgcgcc
     1201 gccgcctggt ggaagggccg gtcgccgccc cggcgtgacc ttggcgggcg gcgcggtttg
     1261 gattatcctt gctgcaacgc aaaagggtgg caggcatgcg catcggcgtc ccgaaggaaa
     1321 tcaagaccca cgaatatcgc gtcggcctga ccccggccag tgtgcgcgag ctggtgtccc
     1381 atgggcacga ggtgacggtc gagaccaagg cgggcgaggg catcggcgtc accgacgcgc
     1441 tgtaccagat ggcgggcgcc aaggtcatgg cggggcctgc cgaggtgttc gcctgggccg
     1501 acatgatcgt caaggtcaag gagccgcagc cgtcggaata cggcctgctg cgcgatggcc
     1561 agatcctgtt cacctatctg catctcgccc ccgaccgcca gcagacccgc gccctggtgg
     1621 attccggctg catcgccat
//
LOCUS       DATIKR010000130         2606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_98671, whole genome shotgun sequence.
ACCESSION   DATIKR010000130 DATIKR010000000
VERSION     DATIKR010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98671"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VLL76_01960"
     CDS             <1..326
                     /locus_tag="VLL76_01960"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSV28284.1"
                     /translation="HVSPADIDRVHDGQEAALRFTAFNAKTTPVVEGQVAVVSADRNT
                     DEATREAFYTARVEVPEDQAARLPGTLKAGMPVEVMLQGGSSTPLEYLVKPLLDGFAR
                     SFKER"
     gene            651..2567
                     /locus_tag="VLL76_01965"
     CDS             651..2567
                     /locus_tag="VLL76_01965"
                     /inference="COORDINATES: protein motif:HMM:TIGR03661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV28285.1"
                     /translation="MATNPLTSAATNTDMKWAFPNLVNPTIIDLSKTGGQDWWQFRAD
                     EDVIFIGADSVRTANKLQTDGGRNIVVLGGEYQPQYDSRGATLHFLNVHGSVHVEGVK
                     IDSTKASQDGIAVAGAPGKQPDVTVQNTVITGIHGTEGGVHGDVFQTHGPVGNMRFYN
                     ITADTSYQGFFIAPQYSPGHKSADFENVNLSYNGGSGHTYQYWFVDGSNQTPYPVTLK
                     NVYATERSGMKAEDSSVWPKASMGAVRVGDQITWPGYPYKGAITVGEPAKDFATDANI
                     GLNFKADGVKDATTGTIPPVDGTPSPSTPPAPAPSAEPTKPDGVAETAAPTNWINATD
                     AKANVAGTDGADQLAGVEGAADAGLAGGKGDDTYIVDMAADKVVEAVGAGTDKVVSYA
                     STYTLSANVENLELGGTANSAGIGNASANIITGNDGANLLKGMDGNDMLVGGKGNDVL
                     DGGNGQDLMVGGLGNDTIVISRSTDVGVEKSGEGVDTVKSYLSYSLGKYAENLELLGQ
                     AKNATGNDWHNKLTGNDLANVINGKGGNDVIAGGKGADVITTGAGKDSVVFKSLAEAG
                     DVVKDFKLGEDTLNVTALLKSIGSASTSPATDGVLAFTQQGANTVVTVKETKLVTLEN
                     VDAHDVQATADHWA"
BASE COUNT          542 a          916 c          769 g          379 t
ORIGIN      
        1 cccatgtcag ccccgccgac atcgaccgcg tccacgacgg ccaggaggcc gccctgcgct
       61 tcaccgcctt caacgccaag accacgccgg tggtcgaggg ccaggtggcg gtggtgtcgg
      121 ccgaccgcaa caccgacgaa gccacccgcg aggccttcta caccgcccgc gtcgaggtcc
      181 ccgaggacca ggccgcccgc ctgcccggca ccctgaaggc cggcatgccg gtcgaagtga
      241 tgctgcaagg gggtagcagc acccccctgg aatacctggt caagcctctt ctggacggct
      301 tcgcgcggtc gttcaaggag cggtagggtc aaccccctcg gctgtcatcc tgagcgtagc
      361 gaaggatctt tcacccaggg tgcctgaaag atgcttcgct tccgctcagc atgacaaatt
      421 gggataggca ggccaatcaa tgccaacaca aaacaatatt catttcgaat acttaccgaa
      481 gcccgccgtc acaggcgggc ttttcttttg aattaacacc aaagatgttg aactatatta
      541 tcaatcttca tttcctgtta accgctatcg cccacactcc gcttcagacg cagagtgaaa
      601 tctttgctcg tgctgtctat ccaacagcaa tagagacaaa aggaattctg atggctacga
      661 accccctcac cagcgccgcg accaacaccg acatgaagtg ggcgttcccc aacctcgtga
      721 accccaccat catcgacttg agcaagaccg gtggtcagga ctggtggcag ttccgtgccg
      781 acgaagacgt gatcttcatc ggcgccgaca gcgtccgcac cgccaacaag ctgcagaccg
      841 acggcggccg caacatcgtg gtcctgggcg gcgaatacca gccgcagtac gattcgcggg
      901 gtgccaccct gcacttcctg aacgtgcacg gttcggtgca tgtggaaggc gtcaagatcg
      961 acagcaccaa ggcgtcgcag gacggcatcg ccgtcgccgg cgccccgggc aagcagcccg
     1021 acgtgaccgt ccagaacacc gtcatcaccg gcatccacgg caccgagggc ggcgtccacg
     1081 gcgacgtgtt ccagacccac ggtccggtcg gcaacatgcg cttctacaac atcaccgccg
     1141 acaccagcta ccagggcttc ttcatcgccc cgcaatacag ccccggccac aagtcggccg
     1201 atttcgagaa cgtcaacctg tcctacaacg gcggctcggg ccacacctac cagtactggt
     1261 tcgtcgacgg ctccaaccag accccgtatc cggtcaccct gaagaacgtc tacgccaccg
     1321 agcgttcggg catgaaggcc gaggattcga gcgtgtggcc gaaggccagc atgggcgcgg
     1381 tgcgggtcgg cgaccagatc acctggccgg gctatcccta caagggcgcc atcaccgtcg
     1441 gcgagccggc caaggacttc gccaccgacg ccaatatcgg cctgaacttc aaggccgacg
     1501 gcgtcaagga tgccaccacc ggcaccattc cgccggtcga cggcaccccg tcgccgtcca
     1561 ccccgcccgc tccggcgccg tcggccgagc cgaccaagcc ggacggcgtc gccgagaccg
     1621 ccgccccgac caattggatc aacgccaccg acgccaaggc caatgtcgcc ggcaccgacg
     1681 gcgccgacca gttggcgggt gtcgagggtg cggccgatgc cggcctggcc ggcggcaagg
     1741 gcgacgacac ctatatcgtc gacatggccg ccgacaaggt ggtcgaggcg gtcggcgccg
     1801 gcaccgacaa ggtcgtgtcc tatgcctcca cctacacgct gtccgccaac gtcgagaatc
     1861 tggagctggg cggcaccgcc aacagcgccg gcatcggcaa tgcctcggcc aacatcatca
     1921 ccggcaacga cggcgccaac ctgctcaagg gcatggacgg caacgacatg ctggtgggcg
     1981 gcaagggcaa cgacgtcctc gacggcggca acggccagga cctgatggtc ggcggtctcg
     2041 gcaacgacac catcgtcatc agccgctcca ccgatgtcgg cgtcgagaag tcgggcgaag
     2101 gcgtcgacac cgtcaagtcg tacctgtcct acagcctggg caagtacgcc gagaacctgg
     2161 aactgctggg tcaggccaag aacgccaccg gcaacgactg gcacaacaag ctgaccggca
     2221 acgacctggc caacgtcatc aacggcaagg gcggcaacga cgtgatcgcc ggcggcaagg
     2281 gtgccgacgt catcaccacc ggcgccggca aggacagtgt ggtgttcaag tccctggccg
     2341 aggccggcga cgtggtcaag gacttcaagc tgggcgagga caccctgaac gtcaccgccc
     2401 tgctgaagtc catcggctcg gcctcgacca gccccgccac cgacggcgtc ctggccttca
     2461 cccagcaggg tgccaacacc gtcgtgacgg tgaaggagac caagctggtg accctggaaa
     2521 acgtggacgc ccacgacgtc caggccaccg ccgaccattg ggcctaacgg ctaccttcgt
     2581 ccgtcatccc cgcgaaggcg gggatc
//
LOCUS       DATIKR010000131         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_135099, whole genome shotgun sequence.
ACCESSION   DATIKR010000131 DATIKR010000000
VERSION     DATIKR010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135099"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..1755)
                     /locus_tag="VLL76_01970"
     CDS             complement(52..1755)
                     /locus_tag="VLL76_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HSV28286.1"
                     /translation="MQAWRNLRLSSRFMIIVGLGVIALVAGVVVGIARFERAEMERQL
                     QQLSANEMTSLHALILNVMAKRPEDGDNIGIQVFNNWFDSRNVHYPGKVWSAWGPKVA
                     QYMAETEPGKAGKPPRDDIDQEAMATKQAVGRFVDGAYRYAYPIVLGETDGAKEEICF
                     SCHGGMGMESGEVIAVLSSSLSTVEAEAKLNTILTVLIVGGIIATLVAVLGVRAILNK
                     VIASPVADMTKRMNQLAGGDVSVDVPALDRKDEIGDIARAVQVFKENTIAKQAMEQEA
                     RKAAASREARMLRLEELIRSFETAVAAVLETVGASAQKMTATARRMVDFADAAADRAN
                     DAASAANEANSNVKMVSEAAEELSNSIREIAQQVAMSNDVAASATREADGVNTRVTGL
                     AGSADKIGEIIELITGIAEQTNLLALNATVEAARAGEAGKGFAVVASEVKNLARQTVK
                     ATEDISTQVSTIQRETHMTVGAIKGIGSTISSMDGITTAIAAAIEEQGAATQEIARNI
                     DHAATGTNVVYENITEVTHTIHETDQAAKEVLAAVENLQNQAATLRMEVDRFLAGIRE
                     V"
     gene            complement(1903..>2018)
                     /locus_tag="VLL76_01975"
     CDS             complement(1903..>2018)
                     /locus_tag="VLL76_01975"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382994.1"
                     /note="catalyzes the transamination of the branched-chain
                     amino acids to their respective alpha-keto acids; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HSV28287.1"
                     /translation="TGTAAEVTPVREIGPYTFTPGQLSRQLIDDYETLVHS"
BASE COUNT          290 a          647 c          684 g          397 t
ORIGIN      
        1 cacccggccc ttcgggccac cctctcccgc aggcgggaga gggtattaac cttacacctc
       61 cctgatcccc gccaggaacc ggtccacttc catgcgcagg gtcgcggcct ggttctgcag
      121 gttctcgacg gcggccagca cttccttggc ggcctggtcg gtctcgtgga tggtgtgggt
      181 gacctcggtg atgttctcgt agaccacgtt ggtgccggtg gcggcgtggt cgatgttgcg
      241 ggcgatttcc tgggtggcgg cgccctgttc ctcgatggcg gcggcgatgg cggtggtgat
      301 gccgtccatg gaggaaatgg tgctgccgat gcccttgatg gcgcccaccg tcatgtgggt
      361 ttcccgctgg atcgtcgaca cctgggtcga gatgtcctcg gtcgccttga ccgtctggcg
      421 ggccaggttc ttgacctcgc tggcgaccac ggcgaagccc ttgccggcct cgccggcgcg
      481 ggcggcctcg acggtggcgt tcaaggccag caggttggtc tgctcggcga tgccggtgat
      541 cagctcgatg atctcgccga tcttgtcggc cgatccggcc aggccggtga cgcgggtgtt
      601 gacgccgtcg gcctcgcgcg tggcgctggc ggcgacgtcg ttggacatgg cgacctgctg
      661 cgcgatctcg cggatcgagt tcgacagctc ctcggccgcc tcgctgacca tcttgacgtt
      721 ggaattggcc tcgttggcgg cgctggccgc gtcgttggcg cggtcggcgg cggcgtcggc
      781 gaaatcgacc atgcgccgcg cggtggcggt catcttctgg gccgaggcgc ccaccgtctc
      841 gagcaccgcc gcgacggcgg tctcgaagct gcggatcagt tcctcgagcc gcagcatgcg
      901 ggcctcgcgc gaggcggcgg ccttgcgcgc ctcttgctcc atggcctgct tggcgatggt
      961 gttttccttg aacacctgca cggcgcgggc gatgtcgccg atctcgtcct tgcggtccag
     1021 cgccgggaca tcgaccgaga cgtcgccgcc ggccagctgg ttcatgcgct tggtcatgtc
     1081 ggcgacgggg ctggcgataa ccttgttcag gatggcgcgc acgcccagca ccgccaccag
     1141 ggtggcgatg atgccgccga cgatcaggac ggtcagaatg gtgttgagct tggcctcggc
     1201 ctcgacggtc gacagcgacg acgacagcac ggcgatgact tcgcccgatt ccatgcccat
     1261 gccgccgtgg cacgagaagc agatctcttc cttggcgccg tcggtctcgc ccagcacgat
     1321 gggataggcg tagcggtagg cgccatcgac gaagcggccg acggcctgct tggtggccat
     1381 cgcctcctgg tcgatgtcgt cacgcggcgg cttgccggcc ttgcccggct cggtctcggc
     1441 catgtactgg gccaccttgg ggccccaggc actccacacc ttgccgggat aatggacgtt
     1501 gcggctgtcg aaccagttgt tgaacacctg gatgccgatg ttgtcgccgt cctcgggccg
     1561 cttggccatg acgttgagga tcagcgcatg cagcgaggtc atctcgttgg ccgacaactg
     1621 ctgcagttgc cgttccatct cggcgcgctc gaaacgagcg atgcccacga ccacgccggc
     1681 cacaagagcg atgacgccga ggccgacgat aatcatgaag cggctggaca gccgcaggtt
     1741 ccgccaggct tgcaatcgac tttccacctg tttccgacgc tgcctcgtcc ccggagcagc
     1801 gcacaacctt ccccttgggg aagactatta tgaaaaggcc ggcattggga ataccggcct
     1861 ttcgttcagg atggaaaaac gttccataag cctctgtgaa ttctacgaat ggacgagcgt
     1921 ttcgtagtcg tcaatcaact ggcgggatag ctgtccagga gtaaaggtat aggggccgat
     1981 ctcgcgcacc ggcgtcacct cggcggcggt gccggtca
//
LOCUS       DATIKR010000132         8310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195565, whole genome shotgun sequence.
ACCESSION   DATIKR010000132 DATIKR010000000
VERSION     DATIKR010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 8310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8310
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195565"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..541)
                     /gene="rplT"
                     /locus_tag="VLL76_01980"
     CDS             complement(185..541)
                     /gene="rplT"
                     /locus_tag="VLL76_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HSV28288.1"
                     /translation="MSRVKRGVTTHARHRKILKLAKGYRGRASTCFRIAIEKVEKALR
                     YAYRDRRAKKRNFRSLWIQRINAGARANGLTYSRFMDGLKKAGIMLDRKVLSDIAARE
                     PEAFKSLVSKAQAALQ"
     gene            complement(545..745)
                     /gene="rpmI"
                     /locus_tag="VLL76_01985"
     CDS             complement(545..745)
                     /gene="rpmI"
                     /locus_tag="VLL76_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HSV28289.1"
                     /translation="MPKMKTKSAAKKRFKLTASGKVKGNVANKRHCLSAKTQKMKRQA
                     RGTFVLFKADSDKVKQYYLPGA"
     gene            942..2648
                     /locus_tag="VLL76_01990"
     CDS             942..2648
                     /locus_tag="VLL76_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV28290.1"
                     /translation="MAGQEDLKQSRDVYVAFAFAGGDLLVEVADNGRIVFAVGAAMTL
                     LAQPARKLGDSDFVSLFQPQDHPRLERAFARMRSGERIRHLLIYALRGDGKRVPVALS
                     GYQHPERDNRFLLNLSHGGALVPNDVRRAPRSGLLEPESFERLAENLLDEGGGEGAGA
                     YRLTMLELPQLSNFGEQAGHDRMDEFMAELGATLRAHSVGGDSATQLADNRYGVIHSA
                     EVAPTTIEQAVAQLARAIAPGSDLEPNSTTMLLDSGALSGDEAVNALAYTLNRFAKEG
                     APATAKELSEGVSASLSATVDRMRSVKTLIERGDFELAFQPVVDLWTSNVHHFECLVR
                     FAGSDESPYQTVTFAEDTGMAGELDAAICRRAIDFISSPAGSVEGLRFAVNLSGRSIS
                     HPPTARKILDVISRGWHLRRRLLFEVTESAEITDLDFANDVIQEIRSHGHPVCLDDFG
                     AGSAAFHYLRALKVDHVKIDGSYVRDCTKTGESMPFLRAITSLCTELKIGTIAEFVED
                     EETASLLRVLKVRFGQGWHFGKPIKVRPETDPRRAWTTPSMGWRKGLLVCSSRLGTAD
                     VS"
     gene            2799..4481
                     /locus_tag="VLL76_01995"
     CDS             2799..4481
                     /locus_tag="VLL76_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV28291.1"
                     /translation="MAERSLKQPADLYVSLAFAAADVLFELDADGRVTYAVGAAMPLL
                     GRPARLLTELSLHDLVAASDREALTRALAAMSRGERVRNVYLEVEKPGLGGSHVTLSG
                     YAQPDRPGKLVAVMAHSTSYLPPPPKCNTPSGLMDKDSFAARARELMQAPEAEETGYR
                     LTLLEVPEMGDLRDKVGTEAAENFAGRLGERLRTLSAGGDAAGQLSDTKYGIIHSGAV
                     DPEIITQAVAEAAVDCPGVDLAPKAATLVLDVADLPAADAARALAYTLNAFANEEQGG
                     SLEAIAAGLQPRLSQTASEMRAVRKVIEEGAFEMVFQPIVDLWTNVVHHFEALVRFSG
                     NGDRSPYETITFAEDTGLIGELDLAVLRRVIAVMRSRAGANPALRFAVNLSGRSLADP
                     RVTGQVRSILRNVPGLAGRLLFEITESAAISDLAAANAVVQEIRRMGFEVCLDDFGAG
                     SAAFHYLRALKVDHVKIDGSYIRDCMKSNEDVAFIKSMVGLCTDLNITTIAEYVEDAP
                     TAAMLKVMKVRYGQGWHFGKPHSPDLAAAAESPAAWAPPGSEWRRGLLYFKG"
     gene            complement(4482..7253)
                     /gene="polA"
                     /locus_tag="VLL76_02000"
     CDS             complement(4482..7253)
                     /gene="polA"
                     /locus_tag="VLL76_02000"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HSV28292.1"
                     /translation="MSTSPRHLYLVDGSGFIFRAFHALPPMTRGDGTPVNAVYGFTNM
                     VVKLLNETDADAIAVIFDASRQTFRSEIYPEYKAHRPPPPEELVPQFPLIRDATRAFN
                     LPCVEQAGFEADDLIATYARQAVARGARVTIVSSDKDLMQLVGDGIEMLDPLKNKAIR
                     EAEVFEKFGVAPAKVVDVQALCGDATDNVPGVPGIGVKTAAQLIEEYGDLETLLEKAE
                     GIKQPKRRETLLANAELARISKQLVKLRDDVPVEEPLDSFAVREPRPELLTDFLAQMG
                     FKSILSRLQTKPGAPAPAPLPGTAVAAPLPVAPEYELVLTLDGLKRWVDAAIAAGTVA
                     IDTETTSLDPLSCHLVGVSLCVEPGKACYVPFRHAPLEAQGSLLLGGPDAAPEAPKLV
                     PFAEGLEELRRLCGDPSVLKVGHNLKYDLQVLKACGVDVVSIDDTMLLSYVLDGGAHG
                     HGLDELCKLHFDHTCTTFADVCGSGKAQVTFDKVPLDKARDYAAEDADMALRLHRFLK
                     ARLVAERMVTVYETLERPLVPVIVEMERCGIKVDAGVLRSLSTEFGRRMAELEEEVHK
                     LAGHPFNVGSPAQLGKVLFEEMSLPGGKKTKTGQWATGADALEELAAQGHDLPRKVVD
                     WRQVSKLKSTYADALVAQINQGTGRVHTSFSLAATTTGRLSSSDPNLQNIPVRTEDGR
                     KIRHAFIADAGNKILSADYSQIELRLVAHVAKIAGLVEAFRSGMDIHAITASQVFGVP
                     VEGMDPMLRRRAKAINFGIIYGISAFGLAQQLGIPNGEAKAYIDAYFQRYPEIRQYME
                     DTKETARRQGFVTTLFGRKVFTPGIRDKNGNLRAFAERAAINGPIQGGAADIIKRAMI
                     RLPAELAREGLSARLLLQVHDELVFEVAEAEVDRTAALVKRVMESAASLDVPLVVDTG
                     IGDTWDEAH"
     gene            complement(7350..7562)
                     /locus_tag="VLL76_02005"
     CDS             complement(7350..7562)
                     /locus_tag="VLL76_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HSV28293.1"
                     /translation="MTARVEDPATPAATASTEPQVVHATTVACDGNGPALGHPRVFLS
                     FGNDHEIVCPYCSRRFVLAEGAKGHH"
     gene            7615..>8310
                     /locus_tag="VLL76_02010"
     CDS             7615..>8310
                     /locus_tag="VLL76_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV28294.1"
                     /translation="MVQTLSRMPANAIAAEGLRKVYNGKNGAKIALDGVSLAIPRGSF
                     FGLLGPNGAGKSTFINILAGLVKKTEGHVTVWDRDIDRDPRGAKAAIGVVPQELNLDP
                     FFTPRELLDVQAGMYGVPRAERRTMEILEAVGLADKADSYARTLSGGMRRRLLVAKAM
                     VHTPPVLILDEPTAGVDIELRQNLWAYVRELNARGTTVVLTTHYLEEAEELCDQIAII
                     NRGKLVAQDTTRNL"
BASE COUNT         1299 a         2804 c         2820 g         1387 t
ORIGIN      
        1 gtcatccccg cgaaggcggg gatccacggt gccgccggtt acaatggcgg ccggaggtgt
       61 cggccgttcc cgccatggac ccccgccttc gcgggggtga cgatccgggg aaacggcctg
      121 atcaagacaa aaaggggccg cccatcgggc agccccctcc tgtgacttcg gcttaggaca
      181 agccttactg gagggccgcc tgggccttgc tcaccagcga cttgaaggcc tcgggctcac
      241 gcgccgcgat gtccgacagg accttgcgat cgagcatgat gccggccttc ttcaggccgt
      301 ccatgaaccg cgaataggtc aggccgttgg cgcgggcgcc ggcgttgatg cgctggatcc
      361 acagcgagcg gaaattgcgc ttcttggcac ggcggtcgcg ataggcgtaa cgaagcgcct
      421 tctcgacctt ctcgatcgca atgcggaagc aggtgcttgc gcggccacga tagcccttgg
      481 cgagcttgag aatcttacga tgacgggcgt gcgtggtgac gccccgctta acacgcgaca
      541 tgacttacgc tcccggaaga tagtattgct tgaccttgtc actgtcggcc ttgaacagga
      601 cgaaagtgcc acgggcctga cgcttcatct tctgggtctt ggccgacagg cagtggcgct
      661 tgttggccac gttgcccttg accttgccgc tggcagtgag cttgaaccgc ttcttggcgg
      721 cgctcttggt cttcatcttg ggcattttcg ctttccttga agaaagagtt tcagcgatct
      781 gtggcggcaa ggcatgccct aacaggccct gtccgccaag gaagcgaagc ttatagccgc
      841 atgcgtccgc gaatgcaaca cccctgccca aaccggccgt ggcaatcggg atatgactgc
      901 cttatagttg cgtcccggga gcggtggggg agagcggttc catggcgggt caggaggacc
      961 tgaagcagtc gcgcgacgtc tatgtggcgt tcgccttcgc cggcggcgac ctgctggtcg
     1021 aggtggccga caacggccgc atcgtgttcg cggtcggcgc cgccatgacg ctgctggcgc
     1081 agccggcgcg caagctcggc gattccgact tcgtgtcgct gttccagccg caggaccatc
     1141 cccggctcga gcgtgccttc gcccgcatgc gatcgggcga acgcatccgc cacctgttga
     1201 tctacgccct gcgcggcgac ggcaagcggg tgccggtggc gctgtcgggc tatcagcatc
     1261 ccgagcgcga caaccgcttc ctgctgaacc tgtcccatgg cggcgccctg gtgcccaacg
     1321 acgtccgccg cgccccgcgc agcggcctgc tggaaccgga aagcttcgag cgcctggccg
     1381 agaacctgct ggacgaaggc ggcggcgagg gggcgggcgc ctatcgcctg accatgctgg
     1441 aactgccgca attgtccaat ttcggcgagc aggccggcca cgaccgcatg gacgagttca
     1501 tggccgaact gggcgccacc ctgcgcgccc attcggtggg cggcgattcg gcgacccaat
     1561 tggccgacaa ccgctatggc gtcatccatt ccgccgaggt ggcgccgacc accatcgagc
     1621 aggccgtcgc ccaattggcg cgcgccatcg cccccggctc cgacctggaa cccaactcca
     1681 ccaccatgct gctggattcc ggcgcgctgt cgggtgacga ggcggtcaac gccctggcct
     1741 acaccctgaa ccgcttcgcc aaggagggcg cccccgccac cgccaaggaa ctgagcgagg
     1801 gcgtcagcgc ctcgctgtcg gccacggtgg accgcatgcg ctcggtcaag acgctgatcg
     1861 aacgcggcga tttcgaactg gcgttccagc cggtggtcga tctgtggacc agcaacgtcc
     1921 accatttcga atgcctggtg cggttcgccg gcagcgacga atcgccctat cagaccgtta
     1981 ccttcgccga ggacaccggc atggccggcg aactggacgc cgccatctgc cggcgcgcca
     2041 tcgacttcat cagctccccg gccggctcgg tcgaggggct gcgtttcgcc gtcaacctgt
     2101 cgggccggtc catcagccac ccgccgacgg cgcgcaagat cctcgacgtc atcagccgtg
     2161 gctggcacct gcgccgccgc ctgctgttcg aggtcaccga atcggccgag atcaccgacc
     2221 tcgacttcgc caacgacgtc atccaggaaa tccgctcgca cggccacccg gtctgcctcg
     2281 acgatttcgg cgccggctcg gcggcgttcc attacctgcg ggcgctgaag gtggaccacg
     2341 tcaagatcga cggctcctat gtgcgcgact gcaccaagac cggcgaaagc atgccgttcc
     2401 tgcgcgccat cacctcgctg tgcaccgagc tgaagatcgg caccatcgcc gagttcgtcg
     2461 aggacgagga aaccgcctcg ctgctgcggg tgctgaaggt gcggttcggc cagggctggc
     2521 atttcggcaa gcccatcaag gtccgccccg agaccgatcc ccgccgcgcc tggaccaccc
     2581 caagcatggg ttggcggaag ggcctgctgg tgtgctcgtc gcgtctgggg acggcggacg
     2641 tgtcatagcg cgcacccgaa gcggcagtcg cccatgcctg aaagatgctt cgctgtgctc
     2701 agcatgacaa accctgctag cgccgctgat aagcatttgc atcggcacgg aatcgcgccc
     2761 attctgtggt ggggttcgct gacgggatgg gatggccgat ggccgaacgt tcgctcaagc
     2821 agcctgccga cctttacgtt tccctcgcct tcgccgccgc cgacgtgctg ttcgagctgg
     2881 atgccgacgg ccgcgtcacc tatgcggtcg gcgccgccat gccgttgctg ggccggccgg
     2941 cgcggctgct gaccgagttg tcgctgcacg atctggtcgc cgcctcggat cgcgaggcgc
     3001 tgacccgcgc cctggccgcc atgagccggg gcgagcgggt gcgcaacgtc tatctcgagg
     3061 tcgaaaagcc gggtctcggc ggctcgcacg tcaccctctc gggctacgcc cagcccgacc
     3121 ggccgggcaa gctggtggcg gtgatggccc attccaccag ctacctgccg ccgccgccca
     3181 agtgcaacac gcccagcggc ctgatggaca aggacagctt cgccgcccgc gcccgcgagc
     3241 tgatgcaggc gcccgaggcc gaggagaccg gctatcgcct gaccctgctg gaagtgcccg
     3301 agatgggcga cctgcgcgat aaggtcggca ccgaggcggc cgaaaacttc gccggccggt
     3361 tgggcgagcg cctgcgcacg ctgtcggcgg gcggcgacgc cgccggccag ttgagcgaca
     3421 ccaaatacgg catcatccat tccggcgcgg tcgatcccga aatcatcacc caggcggtgg
     3481 ccgaggcggc cgtcgattgc cccggcgtcg atctggcgcc gaaggcggct accctggtgc
     3541 tggacgtcgc cgacctgccg gcggcagacg ccgcccgcgc cctggcctat acgctcaacg
     3601 ccttcgccaa cgaggagcag ggcggcagcc tggaagccat cgccgccggc ctgcagccgc
     3661 gcctgtcgca gacggcgtcg gaaatgcgcg cggttcggaa ggtgatcgag gagggcgcct
     3721 tcgagatggt gttccagccc atcgtcgatc tgtggaccaa cgtggtgcat catttcgagg
     3781 cgctggtgcg gttctcgggc aatggcgacc gctcgcctta cgagaccatc accttcgccg
     3841 aggacaccgg cctgatcggc gagttggacc tggccgtgct gcgccgggtc atcgcggtga
     3901 tgcgcagccg cgccggcgcc aatccggcgc tgcgcttcgc cgtcaacctg tcgggccgtt
     3961 ccctggccga tccgcgcgtg accggccagg tgcggtcgat cctgcgcaac gtgcccggcc
     4021 tggccggccg cctgctgttc gagatcaccg aaagcgccgc catttccgac ctggccgccg
     4081 ccaacgcggt ggtgcaggaa atccgccgca tgggattcga ggtctgcctc gacgatttcg
     4141 gcgccggctc ggcggcgttc cattacctgc gcgccctcaa ggtcgaccac gtcaagatcg
     4201 acggctcgta catccgcgac tgcatgaaga gcaacgagga cgtcgccttc atcaagtcca
     4261 tggtcggcct gtgcaccgac ctcaacatca ccaccatcgc cgaatacgtc gaggacgcgc
     4321 cgacggcggc catgctgaag gtgatgaagg tgcgttacgg ccagggctgg cacttcggca
     4381 agccccattc ccccgacctc gccgccgccg ccgaaagccc cgccgcctgg gccccgccgg
     4441 gcagcgagtg gcgccggggg ctgctttact tcaaaggatg atcagtgcgc ctcgtcccag
     4501 gtgtcgccga tgccagtgtc caccaccagc ggcacgtcca ggctggcggc ggattccatc
     4561 acccgcttga ccagcgcggc ggtgcggtcc acctcggcct cggccacctc gaacaccagt
     4621 tcgtcgtgga cctgcagcag caggcgggcg ctcaggcctt cgcgggccag ttcggccggc
     4681 aggcggatca tggcgcgctt gatgatgtcg gcggcgccgc cctggatggg gccgttgatg
     4741 gcggcgcgtt cggcgaaggc gcgcaggttg ccgttcttgt cgcggatgcc cggggtgaac
     4801 accttgcggc cgaacagggt ggtgacgaag ccctggcggc gcgcggtctc cttggtgtcc
     4861 tccatgtact ggcggatctc gggatagcgc tggaaatagg cgtcgatata ggccttggcc
     4921 tcgccgttgg ggatgcccaa ttgctgcgcc aggccgaagg ccgagatgcc gtagatgatg
     4981 ccgaaattga tggccttggc gcggcgccgc agcatggggt ccatgccctc gaccggcacg
     5041 ccgaacacct ggctggcggt gatggcgtga atgtccatgc ccgagcggaa cgcctcgacc
     5101 agaccggcga tcttggccac atgcgccacc agccgcaact cgatctggga atagtcggcc
     5161 gacaggatct tgttgcccgc gtcggcgatg aaggcgtggc ggatcttgcg gccgtcctcg
     5221 gtgcggacgg ggatgttctg caggttgggg tcgcttgacg acagccggcc ggtggtggtg
     5281 gcggccaggc tgaagctggt gtggacgcgg ccggtgccct ggttgatctg ggccaccagg
     5341 gcgtcggcgt aggtgctctt cagcttcgac acctggcgcc agtccaccac cttgcgcggc
     5401 aggtcgtggc cttgggcggc cagttcctcc agcgcgtcgg cgccggtggc ccattggccg
     5461 gtcttggtct tcttgccgcc gggcaggctc atttcctcga acagcacctt gcccaactgg
     5521 gccggcgagc cgacgttgaa cgggtggccg gccagtttgt ggacctcttc ctcaagctcg
     5581 gccatgcggc ggccgaactc ggtggacagc gagcgcagca cgccggcatc gaccttgatg
     5641 ccgcaccgct ccatctcgac gatcaccggc accagcgggc gctccagcgt ctcgtagacc
     5701 gtgaccatgc gctcggccac cagccgggcc ttgaggaagc ggtgcagccg cagcgccatg
     5761 tcggcgtcct cggcggcgta gtcgcgggcc ttgtccagcg gcaccttgtc gaacgtcacc
     5821 tgcgccttgc cgctgccgca cacgtcggcg aaggtggtgc aggtgtggtc gaagtgcagc
     5881 ttgcacaatt cgtccaggcc atggccgtgg gcgccgccgt ccagcacata ggacagcagc
     5941 atggtgtcgt cgatcgacac cacgtcgaca ccgcaggcct tcagcacctg caggtcgtac
     6001 ttcaggttat ggccgacctt gagcaccgac gggtcgccgc acagccggcg caattcctcc
     6061 agcccttccg cgaagggcac cagcttgggc gcctcggggg ccgcatcggg gccgcccagc
     6121 agcagcgagc cctgggcctc cagcggcgcg tggcggaagg ggacgtagca ggccttgccc
     6181 ggctcgacgc acagcgacac gccgaccaga tggcaggaca gcgggtccag cgaagtggtc
     6241 tcggtgtcga tggcgacggt tccggcggcg atggcggcat cgacccagcg cttcaggccg
     6301 tccagggtca gcaccagttc gtattcgggt gccaccggca gcggcgccgc cacggcggtg
     6361 ccgggaagcg gggcaggggc gggcgcgccg ggcttggtct gcagccggga caggatggac
     6421 ttgaagccca tctgggccag gaagtcggtc agcaattcgg ggcgcggttc gcgcacggcg
     6481 aagctgtcca gcggctcctc gaccgggacg tcgtcgcgca gcttgaccaa ttgcttgctg
     6541 atgcgcgcca attcggcgtt ggccagcagg gtctcgcgcc gcttgggctg cttgatgccc
     6601 tcggccttct ccagcagggt ttccaggtcg ccgtattcct cgatcaactg ggcggcggtc
     6661 ttgacgccga tgccgggcac gcccggcacg ttgtcggtgg cgtcgccgca cagggcctgg
     6721 acgtccacca ccttggcggg ggcgacgccg aatttctcga atacctcggc ctcgcggatc
     6781 gccttgttct tcagcgggtc cagcatctcg atgccgtcgc cgaccaactg catcagatcc
     6841 ttgtcggacg acacgatggt gacgcgggcg ccgcgtgcca ccgcctggcg ggcataggtg
     6901 gcgatcaggt cgtcggcctc gaagccggcc tgttcgacgc agggcaggtt gaaggcgcgg
     6961 gtggcgtcgc ggatcagcgg gaactggggc accagttcct cgggcggcgg cggccggtgg
     7021 gccttgtact cgggatagat ctcgctgcgg aaggtctggc ggctggcgtc gaagatcacc
     7081 gcgatggcgt cggcgtcggt ctcgttcagc agcttcacca ccatgttggt gaagccgtag
     7141 acggcgttga ccggcgtgcc gtcgccccgc gtcatcgggg gcagcgcgtg gaaggcccgg
     7201 aaaatgaatc ccgagccgtc caccaggtac agatgacggg gagacgtgct catgggattg
     7261 cctttacgtc actggttcgt catgcccggg cttgacccgg gcatccacgt ggatggccgg
     7321 atcaagtccg gccatgacgg gaaaatggat cagtggtgac ccttggcgcc ctcggccagc
     7381 acgaagcggc gcgagcaata ggggcagacg atctcgtggt cgttgccgaa cgacaggaac
     7441 acgcggggat ggccgagtgc cgggccgttg ccgtcgcagg cgacggtggt ggcgtggacc
     7501 acctggggct cggtggaggc ggtggcggcg ggggtcgcgg ggtcttcgac gcgggcagtc
     7561 attgttgttg ttccgttgac cgttgaaacg cgcggatgat acccattgcg ggccatggtt
     7621 caaacactct ctcgcatgcc cgccaatgcc atcgccgccg aaggcctccg caaggtctac
     7681 aacggcaaga atggcgccaa gatcgccctc gacggcgtgt cgctcgccat cccgcgcggc
     7741 tcgttcttcg gactgctcgg ccccaacggc gccggcaaga gcacgttcat caacatcctg
     7801 gccggtcttg tgaagaagac cgagggccac gtcaccgtgt gggaccgcga tatcgaccgc
     7861 gatccgcgcg gcgccaaggc cgccatcggc gtggtgccgc aggagctgaa cctcgacccc
     7921 ttcttcaccc cgcgcgagct gctcgacgtg caggccggca tgtacggcgt gccccgggcc
     7981 gagcgccgca ccatggaaat cctggaggcg gtcggcttgg ccgacaaggc ggattcctat
     8041 gcccgcaccc tgtcgggcgg catgcgccgc cgcctgctgg tcgccaaggc gatggtgcac
     8101 acgccgccgg tcctcatcct cgacgagccc accgccggcg tcgacatcga gctgcgccag
     8161 aacctgtggg cctatgtccg cgagctgaac gcgcgcggca ccacggtggt gctgaccacg
     8221 cactatctgg aagaggccga ggaactgtgc gaccagatcg ccatcatcaa ccggggcaag
     8281 ctggtggcgc aggacaccac ccgcaacctg
//
LOCUS       DATIKR010000133         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_62837, whole genome shotgun sequence.
ACCESSION   DATIKR010000133 DATIKR010000000
VERSION     DATIKR010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62837"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..911
                     /gene="msrA"
                     /locus_tag="VLL76_02015"
     CDS             276..911
                     /gene="msrA"
                     /locus_tag="VLL76_02015"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007354035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSV28295.1"
                     /translation="MNLFGSRKVEMVKPEDALPGRDTPMPVPSHHAVLGSPLAPPFPA
                     GMETALFGMGCFWGAERKFWTIPGVFTTAVGYAGGFTPHPTYEEVCSSRTGHNEVVLV
                     VFEPGHVPYRDLLTVFWESHDPTQGMRQGNDVGTQYRSGIYVVSPEQRAEAEASRDAF
                     TARLADAGYGPITTEIVDAPPFYYAEAYHQQYLAKNPDGYCGLGGTGVLCS"
     gene            complement(915..1277)
                     /locus_tag="VLL76_02020"
     CDS             complement(915..1277)
                     /locus_tag="VLL76_02020"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSV28296.1"
                     /translation="MTTADADAPLLDVPYLDDMREWLGDEALAGLLATAPEQLESELA
                     ALAGHWRAGDLAAVRESGHRIKGAAGSVACRRLSALGHRVQLLDAFDEPLLADVTAAV
                     AAATAALAEYRAGLVVPA"
     gene            complement(1309..>2129)
                     /locus_tag="VLL76_02025"
     CDS             complement(1309..>2129)
                     /locus_tag="VLL76_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV28297.1"
                     /translation="GAFERLQSDSNRTAERLAQVLKDINATARSVKQAAAEIASGSAD
                     LSARSEQQASSLEETAASMEELAATVRQNASNAQQANQLAASARDVATGGGQVVGEAV
                     AAMGRIEASSQKIEDIVGMIDEIAFQTNLLALNAAVEAARAGDAGKGFAVVAQEVRNL
                     AQRSAQASKEIKTLIHQSADEVRAGADLVKGSGRTLDEIVSSVRRLADIVGEIAAAST
                     EQAGGIDQVNGAVSHMDEITQQNAALVEESAASAQALEDQADELNRLVGFFRVG"
BASE COUNT          287 a          736 c          763 g          343 t
ORIGIN      
        1 gtgcgggtct cctgcaggtc ggaccgcaac tggctgacct cgctctgcaa ccgggtgacc
       61 tggggatcgg ggccgccgcc acaggcgacc agggccagcg gcgcggcaag gacggcgaga
      121 acgagcgggc gttgcatggg aacctcctgg ttgacgaccc aggggtcatg tggggctgcc
      181 atccgcccgg ggaattcacc caacgggcag gatgcgaaag gtggcatccg ctcgtccgaa
      241 ggcttatctc ttggcgagat gcaaggaggg gtgccatgaa cctgttcggg tcccgcaagg
      301 tcgagatggt caagcccgaa gacgcgctgc ccggccgcga cacgcccatg ccggtgccgt
      361 cgcaccatgc cgtgctgggc tcgccgctgg cgccgccatt ccccgccggc atggagacgg
      421 cgctgttcgg catgggctgc ttctggggcg ccgagcgcaa gttctggacc atccccggcg
      481 tgttcaccac ggcggtcggc tatgccggcg gcttcacgcc ccatcccacc tacgaggagg
      541 tgtgctcgtc gcggaccggc cataacgagg tggtgctggt ggtgttcgaa cccggccacg
      601 tgccgtatcg cgacctgctg acggtgttct gggaaagcca cgatcccacc cagggcatgc
      661 gccagggcaa cgacgtcggc acccaatacc gttcgggcat ctacgtggtc tcgcccgagc
      721 agcgggccga ggccgaggcg tcgcgcgacg ccttcaccgc ccgcctggcc gacgcgggat
      781 acggccccat caccaccgaa atcgtggacg cgccgccctt ctattacgcc gaggcgtacc
      841 accagcaata cctggcgaag aaccccgacg gctattgcgg tctgggcggc accggggtgc
      901 tgtgttcgtg agggtcaggc cggcaccacc agcccggcgc ggtattcggc cagggcagcg
      961 gttgcggcgg cgacggcggc ggtgacgtcg gccagcaggg gttcgtcgaa agcgtccagc
     1021 aactggacgc ggtggcccag tgccgacaga cggcggcagg cgacgctgcc ggcggcgccc
     1081 ttgatgcggt ggccgctctc gcgcacggcg gccaggtcgc ccgcccgcca atggccggcc
     1141 agggccgcca gttcggattc gagctgttcc ggcgcggtgg ccagcaagcc ggccaacgcc
     1201 tcgtcgccca gccattcccg catgtcgtcg agatagggca cgtccagcag cggcgcgtcg
     1261 gcatcggcgg tggtcatggc gttcccctgc gactgtcgtc gccgaagact agcccacccg
     1321 gaagaagccc accagcctgt tcagttcgtc ggcctggtcc tccagcgcct gggccgaggc
     1381 ggcgctttcc tcgaccaggg cggcgttctg ctgggtgatc tcgtccatgt ggctgacggc
     1441 gccgttgacc tggtcgatgc cgcccgcctg ttcggtgctg gcggcggcga tctcgccgac
     1501 gatgtcggcc aggcggcgga ccgacgacac gatctcgtcc agcgtgcggc ccgaaccctt
     1561 gaccaggtcg gcgccggcgc ggacctcgtc ggcgctctgg tggatcaggg tcttgatctc
     1621 cttcgacgcc tgggccgagc gctgcgccag gttgcgcacc tcctgggcca ccacggcgaa
     1681 gcccttgccg gcgtcgccgg cccgcgcggc ctcgacggcg gcattcaagg ccagcaggtt
     1741 ggtctggaag gcgatctcgt cgatcatgcc gacgatgtcc tcgatcttct ggctgctggc
     1801 ctcgatgcgg cccatggcgg cgaccgcttc gcccaccacc tggccgccgc cggtggcgac
     1861 gtcgcgggcg ctggcagcca gttggttggc ctgctgcgcg ttcgaggcgt tctggcggac
     1921 ggtggcggcc agctcttcca tgctggcggc ggtctcctcc aggctggacg cctgctgttc
     1981 gctgcgcgcc gacaggtcgg ccgagcccga ggcgatctcg gcggcggcct gcttgaccga
     2041 gcgggcggtg gcgttgatgt ccttgagcac ttgcgccagg cgctcggcgg tgcggttgga
     2101 atcgctttgc agccgctcga aggcgccct
//
LOCUS       DATIKR010000134         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86715, whole genome shotgun sequence.
ACCESSION   DATIKR010000134 DATIKR010000000
VERSION     DATIKR010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86715"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="VLL76_02030"
     CDS             <1..600
                     /locus_tag="VLL76_02030"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HSV28298.1"
                     /translation="VLDAWDGSYGTRSVGAAAFERLLGRLYDFAHGDCGMTAYWASWN
                     PPALLTRRMARAAPAELAQVLARAADDVAETSPAWGELHRLRLNHALGMLPGMEHLCR
                     FGDLPAPGGNDTVNKTAHGIAGDHRHAIRFGANARFLADLADPDATRVVLLGGQDGWP
                     GSATFLDQLDLWRAGEAIPLPLRPETVRATFPHRTILRP"
     gene            597..2111
                     /locus_tag="VLL76_02035"
     CDS             597..2111
                     /locus_tag="VLL76_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020886129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH3 auxin-responsive promoter family protein"
                     /protein_id="HSV28299.1"
                     /translation="MMLDATFLLRLYANIRLTQLAREDPAATQARQLLGLVRRAQATR
                     FGQDHGFARIRSVADYQARVPLRRYGDLWEGYWKAGYPVLDDVTWPGRIPYFAFTSGT
                     TSGSAKYIPVSRDMVAANKRAALDALVHHIAAHPASHVLGGKSFILGGSTDLVQEAPG
                     VLRGDLSGIAAKEVPRWARPYSSPPVELALEADWEAKIDRLARLAAAQDIRSLSGTPS
                     WVLVFLERVARLAGRPPAEIFPRLELYIHGGIGFAPYRDRFRTVLPQAATREVYPASE
                     GFVAVSDRAPGRGMRLLLDNGLFFEFVPVAELDGPSPTRHWIGTAEAGVDYALVLTSC
                     AGLWSYVLGDVVRLVETRPPRLLVVGRTAHMLNVFGEHLSGEQIEDAVVAAADGQAVL
                     EYTVGARFPGGGTRGHHVFVIETRYLPPDFAQRLDRALCAGSLDYAERRAAGIGLDTP
                     RVIPVPPGFFTAWMKRRGKLGGQHKVPRVVGEEELERLLQPEAPRHAQPGRDHI"
BASE COUNT          285 a          792 c          747 g          328 t
ORIGIN      
        1 gtactggatg cctgggacgg cagttacgga acccgctcgg tcggcgccgc cgccttcgaa
       61 cgcctgctcg gtcggctgta cgacttcgcc catggcgatt gcggcatgac cgcctattgg
      121 gccagttgga accctccggc gctgctgacc cggcggatgg cccgcgccgc ccccgccgag
      181 ttggcgcagg tgctggcgcg cgccgccgac gacgtggccg agacgtcgcc ggcctggggc
      241 gagctgcacc gcctgcgcct gaaccacgcc ttgggcatgc tgccgggcat ggagcatctg
      301 tgccgtttcg gcgacctgcc ggcgccgggc ggcaacgaca ccgtcaacaa gaccgcccac
      361 ggcatcgccg gggaccaccg acacgcaatc aggttcgggg cgaacgcgcg gttcctcgcc
      421 gatctggctg atcccgacgc aacccgcgtg gtcctgctgg gcgggcagga cggctggccg
      481 ggcagtgcga ccttcctcga ccaattggac ctgtggcggg ccggcgaggc cattcccttg
      541 ccgctgcgcc ccgagaccgt ccgcgccacc ttcccccatc gcaccatcct gcggccatga
      601 tgctggacgc caccttcctg ttgcgcctgt acgccaacat ccgcctgacc cagttggccc
      661 gcgaggaccc ggccgccacc caggcgcggc aattgctggg gctggtgcgg cgggcgcagg
      721 ccacccggtt cgggcaagac catggcttcg cccggatccg gtcggtggcc gactaccagg
      781 cgcgggtgcc gctgcgccgc tatggcgatt tgtgggaagg ctattggaag gccggctatc
      841 cggtgctgga cgacgtcacc tggccgggcc gcatccccta tttcgccttc acctcgggca
      901 ccacctcggg ctcggcgaag tacatcccgg tgtcgcgcga catggtcgcc gccaacaagc
      961 gcgcggcgct ggacgccctg gtccaccaca tcgccgcgca cccggccagc catgtcctgg
     1021 gcggcaagtc gttcattctg ggcggcagca ccgacctggt gcaggaggcg cccggggtgc
     1081 tgcgcggcga cctgtcgggc atcgccgcca aggaggtgcc gcgctgggcg cggccctatt
     1141 cgtcgccgcc ggtggaactg gcgctggaag ccgattggga ggccaagatc gaccgccttg
     1201 cccgcctcgc cgccgcccag gacatccgct ccctcagcgg cacccccagt tgggtgctgg
     1261 tgttcctgga gcgggtggcg cggctggcgg gccggccgcc ggccgaaatc tttccccggc
     1321 tggaactcta tatccacggc ggaatcggct tcgcccccta ccgcgaccgc ttccggacgg
     1381 tgctgcccca ggcggccacg cgcgaggtct atcccgcctc ggaaggcttc gtcgccgtgt
     1441 ccgaccgggc gccggggcgc ggcatgcgcc tgctgctcga caacggactg ttcttcgaat
     1501 tcgtgccggt ggccgagttg gacggcccct cccccacccg ccactggatc ggcacggcgg
     1561 aagcaggggt ggactacgcc ctggtgctga cgtcgtgcgc cgggctgtgg agctatgtgc
     1621 tgggcgacgt ggtgcggctg gtcgagacca ggccgccgcg cctgctggtg gtcggccgca
     1681 ccgcccacat gctcaatgtc ttcggcgagc atctgtcggg cgagcagatc gaggatgcgg
     1741 tggtggccgc cgccgacggc caggcggtgc tggaatacac cgtcggcgcc cgcttcccag
     1801 gtggcggcac gcgcggccac cacgtgttcg tgatcgaaac ccgctacctg ccgcccgact
     1861 tcgcgcaacg gctggaccgc gccctgtgcg ccggcagcct ggactacgcc gagcgccgcg
     1921 ccgccggcat cggcctcgac accccccggg tcatcccggt cccccccggc ttcttcaccg
     1981 cctggatgaa gcgccggggc aaactgggcg gccagcacaa ggtgccgcgg gtggtggggg
     2041 aggaggagtt ggagcgactg ctacagccgg aagcccctcg gcacgctcag cctggtagag
     2101 accacatcta acccttcgtc atggccgggc ttgacccggc catccacgcg gc
//
LOCUS       DATIKR010000135         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_26239, whole genome shotgun sequence.
ACCESSION   DATIKR010000135 DATIKR010000000
VERSION     DATIKR010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26239"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VLL76_02040"
     CDS             <1..339
                     /locus_tag="VLL76_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28300.1"
                     /translation="PPFSVTPISGATEARAYFVVQRAEPRPYYVVTYRRGDVVAVQLV
                     GPPPQLPLSFAGVRLGDRMERVIDALGQPTSRCDDKDGVEHWFWQPFPIGIDMQDGVV
                     RAMKVSWPKR"
     gene            complement(347..757)
                     /locus_tag="VLL76_02045"
     CDS             complement(347..757)
                     /locus_tag="VLL76_02045"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HSV28301.1"
                     /translation="MAECQTIESQGAPHGRLTIRTIAMPADTNPHGHIFGGWLMSQMD
                     LAGGMHAFQRANGRVATVAVEAMEFHAPVFVGDELSCYTEIVRTGRTSVSILVEAWVR
                     RRCIDQNQIKVTSATFTYVAVHAEGTGKRELPPE"
     gene            853..>1831
                     /locus_tag="VLL76_02050"
     CDS             853..>1831
                     /locus_tag="VLL76_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28302.1"
                     /translation="MSDLFQNLAPKSNGYSAKDIEVLEGLEPVRRRPGMYIGGTDDRA
                     LHHLVSEVLDNAMDEAVAGHATWIELELDATGTATVRDNGRGIPVDPHPKYPDKSALE
                     VILTTLHSGGKFGGDAYKVSGGLHGVGVSVVNALSDKLVVEVARDRKLYRQEYSRGLA
                     LGPLIEVGAVQNRRGTTVTFHPDAEIFGERAFLKPRTLYRLARSKAYLFRGVQIRWKC
                     DPALLDDGDECPAEDTLHFPNGLVDFLGAVVKGRPLVTRGFFAGTAPLADDMGQVEWA
                     VVWPDDDEDGFTNTYCNTVPTPDGGTHESGLRNALTRGLRAYGELAGNKK"
BASE COUNT          290 a          629 c          618 g          294 t
ORIGIN      
        1 ccgccgttca gcgtcacccc catcagcggc gccaccgagg cgcgcgccta tttcgtcgtc
       61 cagcgcgccg agcctaggcc ctattacgtg gtcacttacc ggcgtggcga cgtggtggcg
      121 gtgcaactgg tcggcccgcc gccgcaactg ccgctgtcct tcgccggcgt gcgcctgggc
      181 gaccgcatgg aacgggtgat cgacgccctg ggccagccca ccagccgctg cgacgacaag
      241 gacggggtcg aacactggtt ctggcagccc ttccccatcg gcatcgacat gcaggacggg
      301 gtggtgcggg cgatgaaggt cagttggccg aagcggtgag cgaggctcac tcgggcggca
      361 attcccgttt gcccgtgccc tcggcatgga cggccacata ggtgaaggtg gcgctggtga
      421 ccttgatctg gttctggtcg atgcagcgcc gcctcaccca ggcttccacc aggatcgaca
      481 ccgaggtacg gccggtgcgg acaatctcgg tgtagcacga caattcgtcg cccacgaaga
      541 cgggggcgtg gaattccatg gcctcgaccg ccaccgtggc gacgcggccg ttggcgcgct
      601 ggaaggcgtg catgccgccg gccaggtcca tctggctcat cagccagccg ccgaagatgt
      661 ggccgtgcgg gttggtgtcg gccggcatgg cgatggtgcg gatggtcagg cgaccatgcg
      721 gcgcgccctg ggattcaatg gtttggcact ccgccatgct cgcctcgtga tcgttacaac
      781 atgttgtggc gtgcgcgcag ggggctacag catccgcttg cacgcgcgtt cggctcccct
      841 ataatgccgc ccatgtccga tctgttccag aacctcgccc caaagagcaa cggctactcc
      901 gccaaggaca tcgaagtcct ggagggcctc gagcctgtcc gccgccgtcc cggcatgtat
      961 atcggcggca ccgacgaccg cgccttgcac catctggtgt ccgaggtgct ggacaacgcc
     1021 atggacgagg cggtggccgg gcacgccacc tggatcgagc tggagctcga cgccaccggc
     1081 accgccaccg tgcgtgacaa cggccgcggc atcccggtcg atccgcatcc caagtatccc
     1141 gacaagagcg cgctcgaggt catcctgacc acgctgcact cgggcggcaa gttcggcggc
     1201 gacgcctaca aggtgtcggg cggcctgcac ggcgtcggcg tgtcggtggt caacgctttg
     1261 tccgacaagc tggtggtcga ggtcgcccgc gaccgcaagc tctatcgcca ggagtattcg
     1321 cgcggtctgg cgctggggcc gctgatcgag gtcggcgcgg tgcagaaccg gcgcggcacc
     1381 accgtcacct tccaccccga cgccgagatc ttcggcgagc gcgctttcct caagccgcgc
     1441 acgctgtatc gcctggcgcg gtccaaagcc tatctgttcc ggggcgtgca gatccgctgg
     1501 aaatgcgatc cggcgctgct ggacgacggc gacgaatgcc cggccgagga cacgctgcac
     1561 ttccccaacg gcctggtcga cttcctgggc gccgtggtca agggccgccc gctggtgacg
     1621 cgcggcttct tcgccggcac cgcgcccctg gccgacgaca tgggccaggt ggaatgggcg
     1681 gtggtgtggc ccgacgacga cgaggacggc ttcaccaaca cctactgcaa caccgtgccg
     1741 acccccgacg gcggcaccca tgaatcgggc ctcaggaacg cgctgacccg tggcctgcgc
     1801 gcctatggcg aactggccgg caacaagaag g
//
LOCUS       DATIKR010000136         2697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_123075, whole genome shotgun sequence.
ACCESSION   DATIKR010000136 DATIKR010000000
VERSION     DATIKR010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2697
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123075"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VLL76_02055"
     CDS             complement(<1..317)
                     /locus_tag="VLL76_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HSV28303.1"
                     /translation="MAGFDRGSLSLAESGALALADAASALDRADDPTTFLRALEHNRR
                     VWQTIREVADRHQWLVPRREQSDYALTTAGKMGKGVNDDHVLALIDIGRRVSAELAPG
                     GDL"
     gene            416..1804
                     /gene="fumC"
                     /locus_tag="VLL76_02060"
     CDS             416..1804
                     /gene="fumC"
                     /locus_tag="VLL76_02060"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HSV28304.1"
                     /translation="MPDFRTETDTMGDVRVPADRYWGAQTQRSLENFPIGTERLPPPL
                     VRALGLVKKAAAQANKRLGVLDPSLADAIARAADEVIDLRLADHFPLVPWQTGSGTQS
                     NMNTNEVIANRANELMGSPLGSKTPVHPNDHVNKSQSSNDSFPTAMHIAAVEEIAHRL
                     LPALDRLAGALEDKARSFAGIVKIGRTHLQDATPLTLQQEAGGWAAQVRAGARRVQAS
                     LDELHELAQGGTAVGTGINAPAGFDRAFCAEVAALTGLPFRPAPDKFAALAGHDALVA
                     ASGALNALAAGLMKVANDIRLLGSGPRCGLGELALPANEPGSSIMPGKVNPTQAEALT
                     MVCCQVMGNHVAVTVGGSQGHLELNVYKPLIAVNVLHSVRLLADAADSFARRCVAGLE
                     ADRDRIADLLDRSLMLVTAMAPHLGYDKAAAIAKAAHAQGLSLREAAVAAGVTEDQFD
                     AWVRPQEMVGPR"
     gene            complement(1809..2009)
                     /locus_tag="VLL76_02065"
     CDS             complement(1809..2009)
                     /locus_tag="VLL76_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HSV28305.1"
                     /translation="MNWDQVKGNWKEFKGKVRSQWGDLTDDDVEKMAGERDQLVGRIQ
                     QRYGCTREEADRQVRDWEGTMH"
     gene            2067..2276
                     /locus_tag="VLL76_02070"
     CDS             2067..2276
                     /locus_tag="VLL76_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HSV28306.1"
                     /translation="MPIRKRSIMIAGHATSVSLEEEFWDELRAIAEARGASINQLVAG
                     IDAGRDGNLSSAIRVFVLNAVKAGR"
BASE COUNT          443 a          918 c          911 g          425 t
ORIGIN      
        1 ttgaggtcgc cgcccggggc cagttcggcc gagacgcggc ggccgatgtc gatcagcgcc
       61 agcacgtggt cgtcgttgac gcccttgccc atcttgccgg ccgtggtcag ggcgtaatcc
      121 gattgctcgc gccgtggcac cagccattgg tggcggtcgg ccacttcccg gatggtctgc
      181 cagacgcggc gattgtgctc cagcgcgcgc aggaacgtgg tggggtcgtc ggccctgtcc
      241 agcgcgctgg cggcgtccgc caacgccaag gccccgcttt cggcaaggct caggctgcct
      301 cggtcgaatc cggccattga actcctcccg gctgaattca ttgtaatggg gccgtgggcg
      361 gccaattttt aagtttttct gacatgatcg acggcagcca agcgaggagg gccccatgcc
      421 tgacttccgc accgagacgg acaccatggg cgacgtccgg gttcccgccg accgttattg
      481 gggggcgcag acccagcgca gcctggagaa cttcccgatc ggcaccgagc gcctgccacc
      541 gccgttggtg agggccctgg gcctggtcaa gaaggcggcg gcacaggcca acaagcgcct
      601 gggggtgctg gacccctcgc tcgccgacgc catcgctcgg gccgccgacg aggtgatcga
      661 cctccgcctg gccgaccact ttccgctggt gccctggcaa acgggctcgg gcacccagtc
      721 aaacatgaac acgaacgagg tgatcgccaa tagggcgaac gagctaatgg gctcgcccct
      781 tggcagcaag acgccggtgc atcccaacga ccacgtcaac aaaagccaat cctcgaacga
      841 cagcttcccg accgccatgc atatcgccgc cgtcgaggag atcgcccacc ggctgctgcc
      901 ggcgctggac cggctggccg gggcgctgga ggacaaggcg cggtcctttg ccggcatcgt
      961 caagatcggc cgcacccatc tgcaggacgc gacgccgctg accctgcaac aggaggccgg
     1021 cggctgggcg gcgcaggtgc gggcgggcgc ccgccgtgtc caagcctcgc tggacgaact
     1081 ccacgaactg gcccagggcg gcacggcggt gggcaccggc atcaacgccc ccgccgggtt
     1141 cgaccgcgcc ttctgcgccg aggtggcggc gctgaccggc ctgccgttcc gcccggcgcc
     1201 cgacaagttc gccgccctgg ccggccacga cgccctggtg gcggcgtcgg gggcgctcaa
     1261 cgccctggcg gcggggctga tgaaggtggc caacgacatc cggctgctgg gttcggggcc
     1321 gcgttgcggc ctgggggaac tggcgctgcc ggccaacgag ccggggtcgt cgatcatgcc
     1381 cggcaaggtc aacccgaccc aggccgaggc gctgaccatg gtgtgctgcc aggtgatggg
     1441 caaccacgtg gcggtgacgg tgggcggcag ccaggggcat ctggagctca acgtctacaa
     1501 gccgctgatc gctgtcaacg tgctgcattc cgtccgcctg ctggccgatg ccgccgacag
     1561 cttcgctcgg cgctgcgtcg ccgggctgga ggcggaccgc gaccgcatcg ccgacctgct
     1621 ggaccgctcg ctgatgctgg ttaccgccat ggcgccccat ctcggctacg acaaggccgc
     1681 cgccatcgcc aaggcggctc atgcccaggg cctgagcctg cgcgaggcgg ccgtggcggc
     1741 gggggtgacg gaggaccaat ttgacgcctg ggtgcggccc caggagatgg tggggccgcg
     1801 ataggcggtt agtgcatcgt gccttcccag tcgcgcacct ggcgatcggc ctcttcgcgc
     1861 gtgcagccat agcgctgctg gatgcggccg accaactggt cgcgctcgcc agccatcttc
     1921 tcaacgtcat cgtcggtcag gtcgccccat tggctgcgaa ccttgccctt gaactccttc
     1981 caattgccct tgacctgatc ccagttcatg gcattcctcc attatggcct cgtgagagga
     2041 acagtcgagg cgggcagggg gttcggatgc cgatcaggaa gcggtcgatc atgatcgccg
     2101 gccacgccac cagcgtgtcg ctggaagagg aattctggga cgaattgcgc gccatcgccg
     2161 aggcgcgcgg cgcctcgatc aatcaattgg tcgccggcat cgacgccggc cgcgacggga
     2221 acctgtcgtc ggccatccgg gtgttcgtgc tgaacgccgt caaggcgggg cgctgaaaaa
     2281 agggaagccc ccggcgggtc cgcaccaggg gctcaagtca cacgacattt ccatccggtg
     2341 aacgggcgtt cagcgcccca tccggctgac cagccaccac cccaaaccgc cggtgatgac
     2401 caggatgctg accatgaaac caagagcgat gtaagcttcg gtgtccaaaa tcatgtcgat
     2461 gtccccctcc agggttcgtc caatgcggcc aaagatagca ggacccgcaa ccggtggctt
     2521 tgatctggat catccgggaa tggtgcttgt gccaacacca gcctgttggc agaatttggc
     2581 ctcttccggg gagatcgaac gtatgaccca ggtgggacgc tgacgccatg gcccgggaac
     2641 ccgagatcgt cgcagcctat cgccgcgccg ccgaagccgg cgacgccgcc gcgcaga
//
LOCUS       DATIKR010000137         2619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_231949, whole genome shotgun sequence.
ACCESSION   DATIKR010000137 DATIKR010000000
VERSION     DATIKR010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231949"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..1539)
                     /locus_tag="VLL76_02075"
     CDS             complement(58..1539)
                     /locus_tag="VLL76_02075"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HSV28307.1"
                     /translation="MKIKHRQEPIGIVDIGSNSIRLCVYDGAFRVPIPLFNEKAVCGL
                     GVGLGATGRLNPLGVPAALATVGRFVALSRAMECERLEILATAAVRDAEDGPAFVREI
                     EERFDVEVKVLSGGQEAKMAAMGVLCGTPDADGIVADLGGGSLELVDVAGGEFGQHIT
                     MPLGLQRLTEASGDDRGKAAAIIDKHLKKLSWIKQGKGRNVYAVGGAWRSIARICINQ
                     THHPLTVLDNFSLETREAIRIIDLVATQSKKSLEKVPGVSKKRVAGLPMAALILEKVV
                     QAIQPERLVFSIYGMREGQFYKRLPERLKVQDPLLAICRQMALMNSRFPEHGDELMQW
                     MAPLFPDETAHQARLRHAACLVSDIFWNEHPDYRGEQAFLRILRLPFMGVGHRDRAAI
                     ALTVFHRYQGNEDNPHARSAMALLDEASLKRCRVTGLALRLAHTLSGGAPNLLRRTRL
                     VVDGGDLILELPDNPAFAIENDRTFDRLAKVLDCELLVFRKVG"
     gene            complement(1547..>2619)
                     /gene="ppk1"
                     /locus_tag="VLL76_02080"
     CDS             complement(1547..>2619)
                     /gene="ppk1"
                     /locus_tag="VLL76_02080"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HSV28308.1"
                     /translation="VQFIRQAAHDPQVVAIKQTLYRTSKDSPIVKALVEAAEAGKSVT
                     AMVELKARFDEEANIRWARDLESAGAQVVFGFLELKTHAKISLVVRREGGGLVSYVHF
                     GTGNYHPITAKVYTDLSFFTCDPDLTRDAAKAFNYMTGYAMPEQMDKLAIAPLQLKKK
                     LLHLIEAETENARAGKPAAIWAKMNSIVDPLLIDALYRASQAGVQVDLVIRGICCLRP
                     GVPGLSENIRVKSIVGRFLEHSRVICFGNGHRLPSRHAKIFISSADWMQRNMDWRVET
                     LVPIDNPTVHRQILEQIMVANLKDQAQTWSLGSDGTYTRLVNEEGAFSAHTYFMTNPS
                     LSGRGSAIERGRTPKLLLDQSA"
BASE COUNT          412 a          856 c          887 g          464 t
ORIGIN      
        1 ggaaggatta tcacggcggc cggcgggttt acatatgact tacggtcgaa agtccgccta
       61 cccgaccttg cggaacacca gcaattcgca gtcgagcacc ttggcgagtc ggtcgaaggt
      121 gcggtcgttc tcgatggcga aggcggggtt gtcgggcagt tccaggatca ggtcgccgcc
      181 atccaccacc agccgggtcc ggcgcagcag gttgggggcg ccgcccgaca gggtgtgggc
      241 caggcgcaag gccaggccgg tgacgcggca gcgcttcagc gaggcctcgt ccaacagggc
      301 catggcgctg cgcgcatgcg gattgtcctc gttgccctgg tagcgatgga acacggtcag
      361 cgcgatggcg gcgcggtcgc ggtggccgac gcccatgaac ggcaggcgca ggatgcgcag
      421 gaacgcctgc tcgccgcgat aatcgggatg ctcgttccag aagatgtccg acaccaggca
      481 ggcggcgtgg cgcagcctgg cctggtgcgc cgtctcgtcg gggaacagcg gcgccatcca
      541 ttgcatcagc tcgtcgccgt gctcggggaa gcgcgagttc atcagcgcca tctggcggca
      601 gatggcgagc agcgggtcct ggaccttgag gcgttcgggc agacgcttgt agaattggcc
      661 ctcgcgcatg ccgtagatcg agaacaccag ccgttccggc tggatggcct gcaccacctt
      721 ttccaggatc agcgctgcca tcggcaggcc ggcgacccgc ttcttggaca cgcccggcac
      781 cttttccagc gacttcttgc tttgcgtcgc caccaaatcg atgatgcgga tggcttcgcg
      841 tgtctccagc gagaaattgt ccagcaccgt cagcggatgg tgggtctggt tgatgcagat
      901 gcgggcgatg gagcgccagg cgccgcccac ggcatagaca ttgcggccct tgccctgctt
      961 gatccaggac agcttcttca aatgcttgtc gatgatggcg gcggccttgc cgcgatcgtc
     1021 gcccgacgcc tcggtcaggc gctgcaggcc cagcggcatg gtgatgtgct ggccgaactc
     1081 gccgcccgcg acgtccacca gttcaagcga gccgccgccc aggtcggcga cgatgccgtc
     1141 ggcgtcgggg gtgccgcaca gcacgcccat ggcagccatc ttggcttcct ggccgcccga
     1201 cagcaccttg acctcgacgt cgaaacgctc ctcgatctcg cgcacgaagg cgggtccgtc
     1261 ctcggcgtcg cgaaccgccg ccgtcgccag gatttccagc cgctcgcatt ccatggcgcg
     1321 cgacagcgcg acgaagcgcc ctactgtcgc caaggccgcc ggcacgccca gcggattgag
     1381 ccggccggtg gcgcccaggc cgacgcccag gccgcacacc gccttttcgt tgaacagcgg
     1441 gatcggcacc cggaaggcgc cgtcatacac gcacaagcgg atcgagttgg aaccgatgtc
     1501 gacgataccg atcggctcct ggcgatgctt gatcttcacg ccgccctcac gccgactggt
     1561 cgagcaacag cttgggcgtc cgcccgcgtt cgatcgcgct gccccgtcct gacagcgacg
     1621 ggttggtcat gaagtaggtg tgggcgctga acgccccttc ctcgttgacc agccgcgtgt
     1681 aggttccgtc cgaccccagg ctccaggtct gtgcctggtc cttcaggttc gccaccatga
     1741 tctgctccag gatctggcga tggacggtgg gattgtcgat gggcaccagg gtttccaccc
     1801 gccaatccat gttgcgctgc atccagtcgg ccgacgagat gaatatcttg gcatggcggc
     1861 tgggcaggcg gtggccgttg ccgaagcaga tcacccgcga atgttccagg aagcggccga
     1921 cgatggattt gacccggatg ttctcggaca ggccgggcac gccggggcgc aggcagcaga
     1981 tgccgcggat gaccaggtcc acctgcacgc cggcctggct ggcgcggtac agcgcgtcga
     2041 tcagcagggg atcgacgatg gagttcatct tggcccagat ggcggcgggc ttgccggcgc
     2101 gggcgttctc ggtctcggcc tcgatcaggt gcagcagctt cttcttcagt tgcagcggcg
     2161 cgatcgccag cttgtccatc tgctccggca tggcatagcc ggtcatgtag ttgaacgcct
     2221 tggccgcgtc gcgggtcagg tcggggtcgc aggtgaagaa gctgaggtcg gtgtagacct
     2281 tggcggtgat cgggtggtag ttgccggtgc cgaagtggac gtacgacacc agcccgccgc
     2341 cctcgcgccg caccaccagg ctgatcttgg cgtgggtctt cagttccagg aagccgaaca
     2401 ccacctgcgc gccggcgctt tccaggtcgc gggcccagcg gatgttggcc tcttcgtcga
     2461 agcgggcctt cagctcgacc atggcggtga ccgacttgcc ggcctcggcc gcctcgacca
     2521 gcgccttgac gatggggctg tccttcgagg tgcgatacag cgtctgcttg atcgccacca
     2581 cctgcgggtc gtgcgccgcc tggcggatga actgcacca
//
LOCUS       DATIKR010000138         2747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_62956, whole genome shotgun sequence.
ACCESSION   DATIKR010000138 DATIKR010000000
VERSION     DATIKR010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62956"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VLL76_02085"
     CDS             <1..492
                     /locus_tag="VLL76_02085"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSV28309.1"
                     /translation="TGITLFLFGGVAEMAGEPKTAKGEFLMAVAGPAMSVMIAAMMYG
                     AAGITLGTGNPWLVALLGYLALLNGLLALFNLVPAFPLDGGRMLRAALWAWRGDLLWA
                     TRMATWAGIAVGMALMALGLWLALHGNLVTGLWWILIGIFVRAAAVQAWRQMTLEKSK
                     TSG"
     gene            620..1786
                     /locus_tag="VLL76_02090"
     CDS             620..1786
                     /locus_tag="VLL76_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012699120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV28310.1"
                     /translation="MPGVDTAITTTVVLDAGGLDGLIKALKSKGFRIVGPRISDDAVI
                     YDDIDSTADLPAGWGDEQKGGHYRLKKRADKALFGYTAAAQSWKRFLFPPKQKLFAAT
                     RTASGFKIQPPDKDPPPLAILGARACELAAMRIQGRVFGDKDYAEPGYQARMAGAFVI
                     AVECGQAGGTCFCTSMGTGPEITKGYDIKLVELIDKARHVFVAEAGSGLGADFLAGLK
                     APKAKDTDIAAAQAKVAKAAQSMGRVMETRTAARLKELPEHARWDEVAARCMTCGNCT
                     MVCPTCFCSTVEDVTDLKGDHAERWRKWDSCFSVDFSYIHGGSVRTEARSRYRQWITH
                     KLSTWHDQFGSFGCVGCGRCITWCPVGIDITEEVAAIHKAEVGTGDKPAAKGRK"
     gene            1789..2430
                     /locus_tag="VLL76_02095"
     CDS             1789..2430
                     /locus_tag="VLL76_02095"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV28311.1"
                     /translation="MVQTENLGRIIDEHPFFEGIDAKLRALLVGCAKNERFEAGQFLA
                     REGQKADRFFLVRAGTVAVEIDVPHKDPIVIETVGEGDVVGWSWMVEPYRSSLDVRAV
                     TLVRALSFDAACLRKKMEADHQLGYEVLKRFVPVIAHRMHSARLQMLDLYGPRDGQQP
                     KPAKVEVVKAVKGSKGKNRKADAKLAKPEKPLKATKPEKAKKADKPKKQKKAG"
     gene            2433..>2747
                     /locus_tag="VLL76_02100"
     CDS             2433..>2747
                     /locus_tag="VLL76_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007219969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe hydrogenase subunit gamma"
                     /protein_id="HSV28312.1"
                     /translation="MSAQPKDPMLPRPFRIERVQRELSDTFTMELVPEAGGPFGFKAG
                     QFNMLYVFGVGEVPISISGDPADRSKLVHTTRAVGAVTKALDAMKAGDTLGVRGPYGT
                     AWP"
BASE COUNT          477 a          921 c          921 g          428 t
ORIGIN      
        1 accggcatca ccctgttcct gttcggcggc gtcgccgaga tggcgggcga acccaagacc
       61 gccaagggcg agttcctgat ggccgtcgcc ggccccgcca tgagcgtgat gatcgccgcc
      121 atgatgtatg gcgccgccgg catcacgctc ggcaccggca atccctggct ggtggcgctg
      181 ttgggctatc tggcgctgct caacgggctg ctggcgctgt tcaacctggt gccggccttt
      241 ccgctcgacg gcgggcggat gctgcgggcc gccctgtggg cgtggcgcgg cgacctgctg
      301 tgggccaccc gcatggcgac ctgggccggg atcgcggtgg gaatggcgct catggcgctg
      361 ggattgtggc tggcgctgca cggcaatctg gtcaccggcc tgtggtggat cctgatcgga
      421 atcttcgtcc gcgccgccgc cgtgcaggca tggcgtcaga tgacgcttga aaaatcaaag
      481 accagcgggt gaacagcggc agggcctact ctccaaaaat tcatcctcct ttcgcatcat
      541 tgctcatata gccgattggc gggcgctccc aagagatgta gcattatcgg acccttattt
      601 cctcattggg ggggtctcga tgccaggggt ggacacggcc atcaccacga cggtcgttct
      661 tgatgcgggc ggccttgacg gcctgatcaa ggcattgaaa tccaaggggt tccgcattgt
      721 cggccctcgg atttccgacg acgcggtcat ctacgacgac atagactcca ccgccgatct
      781 gccggccggc tggggcgacg agcagaaggg cggccattac cgcctgaaga agcgcgccga
      841 caaggctctg ttcggctaca cggcggcggc gcaaagctgg aagcgcttcc tgttcccgcc
      901 caagcaaaag ctgttcgcgg cgacccgcac ggccagcggc ttcaagatcc agccgcccga
      961 caaggatccg ccgccgctgg cgatcctggg cgcgcgggcc tgcgaactgg cggccatgcg
     1021 catccagggc cgggtgttcg gcgacaagga ttacgccgag ccgggctacc aggcccgcat
     1081 ggccggcgcc ttcgtcatcg cggtggaatg cggccaggcc ggcggcacct gcttctgcac
     1141 ctccatgggc accggcccag agatcaccaa gggctacgac atcaagctgg tcgagctgat
     1201 cgacaaggcg cgccacgtct tcgtggccga ggccggctcg ggcctgggcg ccgatttcct
     1261 ggccggactc aaggccccca aggccaagga taccgacatc gccgccgccc aggccaaggt
     1321 cgccaaggcc gcccagtcca tgggccgcgt gatggagacc cgcacggcgg cgcggctcaa
     1381 ggaattgccg gaacatgccc gctgggacga ggtcgccgcc cgctgcatga cctgcggcaa
     1441 ctgcaccatg gtgtgcccga cctgcttctg ctcgacggtc gaggacgtca ccgacctcaa
     1501 gggcgaccac gccgagcgct ggcgcaagtg ggattcgtgc ttcagcgtcg atttctcgta
     1561 catccacggc ggttcggtgc gcaccgaggc gcgctcgcgc tatcgccaat ggatcaccca
     1621 caagctgtcc acctggcacg accagttcgg cagcttcggc tgcgtcggct gcggccgctg
     1681 catcacgtgg tgcccggtgg gcatcgacat caccgaagaa gtggcggcca tccacaaggc
     1741 cgaggtggga accggcgaca agccggccgc gaaggggagg aagtgaccat ggtccagacg
     1801 gaaaacctcg gccgcatcat cgacgagcat cccttcttcg aggggatcga cgccaagctg
     1861 cgcgcgctgc tggtcggctg cgccaagaac gaacgcttcg aggccggcca gttcctcgcc
     1921 cgcgagggcc agaaggccga ccgcttcttc ctggtccgcg ccggcaccgt ggcggtggaa
     1981 atcgacgtgc cgcacaagga ccccatcgtc atcgaaacgg tgggcgaggg cgacgtggtc
     2041 ggctggtcgt ggatggtcga gccctatcgc tcgtcgctcg acgtccgcgc cgtcaccctg
     2101 gtgcgcgccc tgtcgttcga cgccgcctgc ctgcgcaaga agatggaggc cgaccaccaa
     2161 ctcggctacg aggtgctgaa gcgcttcgtg ccggtgatcg cccaccgcat gcattcggcc
     2221 cgcctgcaga tgctggacct ctacggcccg cgtgacggcc aacagcccaa gccggccaag
     2281 gtcgaggtgg tcaaggcggt caagggatcc aagggcaaga accgcaaggc cgacgccaag
     2341 ctcgccaagc ccgagaagcc gctgaaggcg accaagccgg aaaaggcgaa gaaggccgac
     2401 aagccgaaga agcagaagaa ggccggctga tcatgagcgc gcagcccaag gatcccatgc
     2461 tgccgcgccc gttccgcatc gagcgggtgc agcgcgaatt gtccgacacc ttcaccatgg
     2521 agctggtgcc cgaggccggc ggcccgttcg gcttcaaggc cggccagttc aacatgctct
     2581 atgtgttcgg tgtcggcgag gtgccgatct cgatctcggg cgatcccgcc gaccgctcca
     2641 agctggtcca caccacccgc gcggtgggcg ccgtgaccaa ggcgctggac gccatgaagg
     2701 ctggcgacac gctgggcgtg cgcggccctt acggtaccgc ctggccg
//
LOCUS       DATIKR010000139         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_111030, whole genome shotgun sequence.
ACCESSION   DATIKR010000139 DATIKR010000000
VERSION     DATIKR010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111030"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VLL76_02105"
     CDS             <1..298
                     /locus_tag="VLL76_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016445837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV28313.1"
                     /translation="INLCKFEGEQFSQAMIVRGSLERLTPVLMTALVAALALVPLVVA
                     GGDPGKEILHPVAVVIFGGLMSSTILDTLVTPVVFLLVGRKAVDANLIPAEVPA"
     gene            316..1014
                     /locus_tag="VLL76_02110"
     CDS             316..1014
                     /locus_tag="VLL76_02110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV28314.1"
                     /translation="MKTLLAAALAVSFAGPAFAQAMQPFYGGQVAVAGDAHVEMILRD
                     GALKAWVRDHADKPLAAAGKATILAGGKKLEAPFRADGPALVAEVSVKSGDKVTAVLS
                     LTVAGKPVSARFAQEAVAVPPLSGPAAAGAKVFAEACAACHGTALRGTDAGPPLLHSN
                     YAPGGLHGDDIIVAAVNNGAQAHHWKFGDMPKPDGIKPGQDKELLAYIRAMQAANGIS
                     APPAPADGGHASHH"
     gene            1026..1475
                     /locus_tag="VLL76_02115"
     CDS             1026..1475
                     /locus_tag="VLL76_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HSV28315.1"
                     /translation="MRKSIIAGAVGAVALAGATFTVFAGPSRPEAVEVWKSPLCGCCG
                     GWVEYMEQQGFKVTVHETDDMDTVKNKLGVPEQAWSCHTAKVAGYVLEGHVPVQALDK
                     LLAEKPQGVTGIASPGMPQGSPGMTGAKEPNVVVTFGGGGVRPFGTY"
     gene            complement(1663..>2157)
                     /locus_tag="VLL76_02120"
     CDS             complement(1663..>2157)
                     /locus_tag="VLL76_02120"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV28316.1"
                     /translation="QPYRMVITDLTLPGVRGLAEIIELVNAAGETPLTVVSSGHSRDV
                     HRRMRVCGVSGLLERDAPPEQISRTLAMVLRGGLAFPEIMAVPSAAALPPAQSELTSR
                     QMRVLSLLTKGKSNKQIAKDLSLSPNTVKAHVSEILRKLEVDGRNEVIAMAMRPMMTL
                     QAAD"
BASE COUNT          344 a          736 c          747 g          330 t
ORIGIN      
        1 catcaacctg tgcaagttcg agggcgagca gttctcgcag gcgatgatcg tgcgcggctc
       61 gctggagcgc ctgacgccgg tgctgatgac ggcgctggtg gcggcgctgg cgctggtgcc
      121 gctggtggtg gcgggcggcg accccggcaa ggagatcctg cacccggtgg cggtggtgat
      181 cttcggcggc ctgatgtcgt ccaccatcct cgacaccctg gtgacccccg tcgtgttctt
      241 gctcgtcggc cgcaaggcgg tcgacgccaa cctgatcccg gccgaggtgc cggcatgacc
      301 aaggagaaga cgtccatgaa gaccctgctt gccgccgcgc tggcggtgtc gttcgccggc
      361 ccggcattcg cccaggccat gcagcccttc tatggcggcc aggtggcggt ggccggtgac
      421 gcccatgtgg agatgatcct gcgcgacggc gccctgaagg cctgggtccg cgaccatgcc
      481 gacaagccac tggcggccgc cggcaaggcc accatcctgg ccggcggcaa gaagctggag
      541 gcgccgttca gggcggacgg cccggcgctg gtggccgagg tttcggtcaa atcgggcgac
      601 aaggtgacgg cggtgctgtc cctcaccgtc gccggcaagc cggtgtccgc ccgcttcgcg
      661 caagaggccg tggcggtgcc gccgttgtcg ggtcccgcgg cggcgggcgc caaggtgttc
      721 gccgaagcct gcgccgcctg ccacggtacc gctttgcgcg gcaccgatgc cggcccgccg
      781 ctgctacatt ccaattatgc gccgggcggc ttgcacgggg acgacatcat cgtcgcggcc
      841 gtcaacaacg gcgcccaggc gcaccattgg aagttcggcg acatgcccaa gcccgacggc
      901 atcaagcccg gccaggacaa ggaattgctg gcctacatcc gtgccatgca ggcggccaac
      961 ggcatctcgg caccgccggc gccggccgac ggcggccacg cgtcgcacca ttgaaggaga
     1021 acatcatgcg caagagcatc atcgcgggcg ccgtcggcgc cgtcgccctg gccggcgcca
     1081 ccttcacggt cttcgccggc ccgtcgcggc ccgaggccgt cgaggtgtgg aagtcgccgc
     1141 tgtgcggctg ctgcggcggc tgggtcgagt acatggaaca gcagggcttc aaggtgaccg
     1201 tccacgagac cgacgacatg gacacggtca agaacaagct tggcgtccct gaacaggcgt
     1261 ggtcgtgcca caccgccaag gtcgccggct atgtgctgga aggccacgtg ccggtgcagg
     1321 cgctggacaa gctgctcgcc gaaaagcccc agggcgtgac cggcatcgcc tcgcccggca
     1381 tgccgcaggg ctcgccgggc atgaccgggg ccaaggaacc caacgtggtg gtcaccttcg
     1441 gcggcggcgg ggtgagaccg ttcgggacat attgagaaca ggctaccgtg cttgacacat
     1501 gacaacctgt ccagcacaag ccaaaccggc tgagaccggt ccaaaatccg ccccctcatc
     1561 gtcatccccc cgccttcgcg ggggtgacga gtctgggggc cgagggccga agctaaaccg
     1621 gaccgccgtg gatcaagtcc gggcataacg ggcagggtcg gcctaatccg ccgcctgcaa
     1681 ggtcatcatc gggcgcatcg ccatcgcgat gacctcgttg cggccgtcca cctccagctt
     1741 gcgcaggatc tcggacacgt gggccttcac cgtgttgggt gacaggctca ggtccttggc
     1801 gatctgcttg ttggacttgc ccttggtcag cagcgacagc acccgcatct ggcgcgacgt
     1861 cagttcgctt tgcgccggcg gcaaagctgc cgcactgggc accgccatga tctcggggaa
     1921 ggcgaggccg ccgcgcagca ccatggccag ggtgcgcgat atctgctcgg gcggggcgtc
     1981 ccgctccagc aggcccgaga ccccgcagac ccgcatgcgg cggtggacgt cccgcgaatg
     2041 gccgctcgag accaccgtca agggtgtttc tcccgcggcg ttgaccagtt cgatgatttc
     2101 cgccagcccg cgcacaccgg gaagcgtcaa gtcggtgatg accatccgat acggctg
//
LOCUS       DATIKR010000140         1707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_2216, whole genome shotgun sequence.
ACCESSION   DATIKR010000140 DATIKR010000000
VERSION     DATIKR010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1334
                     /gene="mutL"
                     /locus_tag="VLL76_02125"
     CDS             <1..1334
                     /gene="mutL"
                     /locus_tag="VLL76_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HSV28317.1"
                     /translation="KFLKAPRTELGHAVDVLERLAMAHPNVAFSLSDGARPVLKLAAQ
                     KGEPAQARLARLAAVIGRDFQDNAVELSAEREGIKLTGWAGLPTYNKGTAAYQYLFVN
                     GRPVKDRLVVGAVRGAYQDVLGHDRHPVVALFLDLPPEVVDVNVHPAKSEVRFRESGL
                     VRGLIVSAIRHALAGAGHRTASTVGNAALGALGAAAQSRAPVYQWQPTPGQIRQAVAA
                     QAPTGLHEALPGLDLPPLAPMLEPQPTETAELDYPLGAARAQLHDTYIVAETRDGLVI
                     VDQHAAHERLVMERMLAAMAEGAVKTQALLLPEVVDLGEAAAVRVADAADTLAEMGLV
                     VEPFGPGAVMVRETPAALGDCDVQGLVRDLADDLAEWGEALKLKERLQDVCATMACHG
                     SVRAGRRLNLTEMNALLRQMEATPKSGQCNHGRPTHVTLKLADVEKLFARR"
BASE COUNT          261 a          600 c          583 g          263 t
ORIGIN      
        1 tgaaattcct gaaggcgccg cgcaccgagc tgggccatgc ggtggacgtg ctggaacgcc
       61 tcgccatggc ccatccgaat gtggcgttct cgctgtccga cggtgcccgg ccggtgctga
      121 aactggcggc acagaagggc gagccggcgc aggcgcggct ggcgcggctg gccgccgtca
      181 tcggccgcga tttccaggac aatgccgtcg aactgtccgc cgagcgcgag ggcatcaagc
      241 tgaccggctg ggccggcctg cccacctaca acaagggcac cgccgcctat caatacctgt
      301 tcgtcaacgg ccggccggtg aaggaccggc tggtggtggg cgcggtgcgc ggcgcctatc
      361 aggacgtgct gggccacgac cgccatccgg tggtcgccct gttcctcgac ctgccgcccg
      421 aggtggtgga cgtcaacgtc catcccgcca agtcggaagt gcgcttccgc gaatccgggc
      481 tggtgcgcgg cctgatcgtg tcggccatcc gccatgccct ggccggcgca ggccaccgca
      541 ccgcctcgac cgtcggcaat gccgccctgg gggccttggg ggccgccgcg cagagccggg
      601 cgccggtcta tcaatggcag cccacgcccg gccagatccg ccaggccgtc gccgcccagg
      661 cccccaccgg cctgcacgaa gccctgcccg gcctcgattt gccgccgctg gcccccatgc
      721 tggagccaca gcccaccgaa acggccgagt tggactatcc gctgggcgcc gcgcgggcgc
      781 agttgcacga cacctatatc gtcgccgaga cccgcgacgg gctggtgatc gtcgaccagc
      841 acgccgccca cgagcggctg gtgatggagc gcatgctggc ggccatggcc gagggcgccg
      901 tcaagaccca ggcgttgctg ctgcccgagg tcgtcgacct gggcgaggcg gcggcggtgc
      961 gggtggccga tgccgccgac accctggccg agatgggcct ggtggtcgag ccgttcggcc
     1021 cgggcgccgt gatggtgcgc gaaacccctg ccgcgctggg cgattgcgac gtccaggggc
     1081 tggtgcgcga cctcgccgac gatctggcgg aatggggcga ggcgctgaag ctgaaggaaa
     1141 ggctgcagga cgtctgcgcc accatggcct gccacggctc ggtgcgcgcg ggccgccggc
     1201 tgaacctgac cgagatgaac gcgctgctgc gccagatgga ggcgactccg aaatccggcc
     1261 aatgcaacca cggccggccg acccacgtga ccttgaaact ggccgacgtg gagaagctgt
     1321 tcgcgcggcg ctgacaagcc tgttgtgggt gatggccgcc caaacgccag acgaccttct
     1381 cccattcgtg ttcttggtgg tgaaatacct gaccgccgca cgtccctgaa agatgcttcg
     1441 ctgacgctca gcatgaacaa acccgttgtc atcctgaggc gcagccgaag gatctttcac
     1501 ccggggtgac ggccgcatcc cccctttcgg ccaggccatc agccatgctt tttcgcacct
     1561 gcgaaaatcc ccacaatagt tgcgtctcgc accatcgggg ttgccccatg agtgagttgc
     1621 gcagtcatca tgatctggtc ggcgccgccg tcgatcgctt gcagcgtgcc gccgccggca
     1681 tggtcaccct ggcggagctt cccggct
//
LOCUS       DATIKR010000141         2755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_111070, whole genome shotgun sequence.
ACCESSION   DATIKR010000141 DATIKR010000000
VERSION     DATIKR010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111070"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1114
                     /locus_tag="VLL76_02130"
     CDS             <1..1114
                     /locus_tag="VLL76_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3362 domain-containing protein"
                     /protein_id="HSV28318.1"
                     /translation="PPPIPLTTPELDRVFELPYARAPHPSYGDARIPAWDMIRFSVNI
                     MRGCFGGCTFCSITEHEGRIIQSRSEASVLREIEDIRDKTKGFTGTISDLGGPTANMW
                     RLACKDKETESVCRRLSCVYPDICKNMSTDHGPLIQLYRKARAVPGVKKIHVASGLRY
                     DLAVKSPEYVKELVAHHVGGYLKIAPEHTEAGPLSKMMKPGIGAYDRFKAMFDAAAKA
                     AGKKLYVIPYFIAAHPGTTDEDMMNLALWLKRNGFKADQVQTYLPSPMALATAMYHSG
                     LNPLKPVRRQGSETVFAAKGLKQRRLHKAFLRYHDPENWPMLRDALKAMGRADLIGPG
                     PDQLVPAGRGPAPTGGGRPFLTQHSPKGRKPKPFKR"
     gene            complement(1104..>2755)
                     /locus_tag="VLL76_02135"
     CDS             complement(1104..>2755)
                     /locus_tag="VLL76_02135"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV28319.1"
                     /translation="IEGIVITDPNGIILSVNPAFTEITGYPAEEAVGQTPRLLKSDHH
                     DDAFYSAMWAELKAKGQWKGELWNRRKSGDVFLEHQTISMVPGPDGRPVRYVAVFNDI
                     TELRRKDERIRHLAYHDPLTALPNRQLLNDRLEHALNMCRREGRQIAVMFLDLDRFKV
                     INDTLGHDVGDNLLREVAKRLSGAVRAVDTVARLGGDEFVVLIEHPDSPRAVAQVAEK
                     IIHALTAPVELGDNVVHVTTSIGISLFPNDGDDLTALMKNADTAMYAAKSAGRNGYHF
                     FSRSMNDKAQWRLELENEMRLALDRQEFELFYQPKVDMATMRPDGAEALIRWRHPTKG
                     VISPADFIPLAEETGLIVAMGEWALLEACSQMRRWREEGLGDVKVAVNLSARQLVGTG
                     LFALVSAALELNELPPGLLELELTESAVMHETERAIAMLEGLKTLGVSIAIDDFGTGY
                     SSLSYLKKLPLDTLKIDRSFVMDIETNEQDAAIVRTILAMAETLRLDVVAEGVETQSQ
                     VDFLSATNCGKCQGYFFSRPLPAADFAKWVRERQTEPALTA"
BASE COUNT          451 a          919 c          917 g          468 t
ORIGIN      
        1 cccgccgccg atcccgctga ccacgcccga actggaccgc gtgttcgagc tgccctatgc
       61 ccgcgcgccg cacccgtcct atggcgacgc ccgcatcccg gcctgggaca tgatccggtt
      121 ctcggtcaac atcatgcgcg gctgcttcgg cggctgcacc ttctgctcga tcaccgagca
      181 cgagggccgc atcatccaaa gccgctccga ggcgtcggtg ctgcgcgaga tcgaggatat
      241 ccgcgacaag accaagggat tcaccggcac catttcggat ctgggcggcc ccaccgccaa
      301 catgtggcgg ctggcctgca aggataagga aaccgagtcg gtgtgccgcc ggctgtcctg
      361 cgtctatccc gacatctgca agaacatgtc caccgaccac ggcccgctga tccagcttta
      421 ccgcaaggcg cgcgccgtgc cgggggtgaa gaagatccac gtcgcctcgg gcctgcgcta
      481 cgatctggcg gtgaaaagcc cggaatacgt caaggagctg gtggcccacc acgtcggcgg
      541 ctatctcaag atcgcccccg aacacaccga ggccgggccg ctgtcgaaga tgatgaagcc
      601 gggcatcggc gcctatgacc gcttcaaggc catgttcgac gcggcggcca aggcggcggg
      661 caagaagctg tacgtcatcc cgtacttcat cgccgcccat cccggcacca ccgacgaaga
      721 catgatgaac ctggcgctgt ggctgaagcg caacggcttc aaggccgacc aggtccagac
      781 ctatctgccg tcgcccatgg cgttggcgac cgccatgtac cattccggcc tcaacccgct
      841 gaagccggtg cggcgccagg gttccgaaac cgtgttcgcc gccaagggct tgaagcagcg
      901 ccgcctgcac aaggcgttcc tgcgctatca cgatcccgag aactggccga tgctgcgtga
      961 cgcgctcaag gccatggggc gggccgacct gatcggaccg gggccggacc agttggtgcc
     1021 ggcggggcgc ggtccggcgc ccaccggagg cgggcggccg ttcctgaccc agcacagccc
     1081 caaggggcgc aagcccaagc cgttcaagcg gtaagcgcgg gttccgtctg gcgctcgcgg
     1141 acccacttgg cgaagtcggc ggcgggcagg gggcgcgaga agaaatagcc ctggcacttg
     1201 ccgcaattgg tggccgacag gaaatccacc tggctctgcg tctcgacgcc ttcggccacc
     1261 acgtcgagcc gcagcgtctc ggccatggcc aggatggtgc ggacgatggc ggcgtcctgt
     1321 tcgttggtct cgatgtccat cacgaacgag cggtcgatct tcagcgtgtc gagcggcagc
     1381 ttcttgaggt agctcaggct ggaatagccg gtgccgaaat cgtcgatggc gatgctgacg
     1441 cccagggtct tgaggccctc cagcatggcg atggcgcgct cggtctcgtg catcaccgcc
     1501 gattcggtca gttccagctc cagcaggccc ggcggcagct cgttgagctc cagcgccgcc
     1561 gacaccagcg cgaacaggcc ggtgccgaca agctggcgag ccgagaggtt gacggccacc
     1621 ttgacgtcgc ccaggccctc ctcgcgccag cgccgcattt ggctgcaggc ctccaatagc
     1681 gcccactcgc ccatggcgac gatcaggccg gtttcctcgg ccagcgggat gaaatcggcc
     1741 ggcgagatca cgcccttggt ggggtggcgc cagcggatca acgcctcggc gccgtcgggg
     1801 cgcatggtcg ccatgtccac cttgggctgg tagaacagct cgaattcctg gcggtccagc
     1861 gccagccgca tctcgttttc gagttccagg cgccattgcg ccttgtcgtt catggaccgg
     1921 ctgaagaagt gatagccgtt gcggccggcc gacttggcgg cgtacatggc ggtgtcggcg
     1981 ttcttcatca acgcggtcag gtcgtcgccg tcgttgggga acaggctgat gccgattgac
     2041 gtggtgacgt gcacgacatt gtcgcccagt tccaccggcg ccgtcagcgc gtggatgatc
     2101 ttttccgcca cctgcgccac cgcgcgcggg ctgtcggggt gctcgatcag caccacgaac
     2161 tcgtcgccgc ccaggcgggc gacggtgtcc accgcgcgca cggcgccgct caggcgcttg
     2221 gccacctcgc gcagcaggtt gtcgccgacg tcgtggccca gggtgtcgtt gatgaccttg
     2281 aagcggtcga ggtcgaggaa catcaccgcg atctgccggc cctcgcggcg gcacatgttc
     2341 aacgcatgct cgaggcggtc gttgagcaat tgccggttgg gcagcgccgt cagcggatca
     2401 tggtaggcca ggtggcggat gcgttcatcc ttgcggcgca gttcggtgat gtcgttgaac
     2461 accgccacat agcgcaccgg acggccgtcg gggccgggga ccatgctgat ggtctggtgc
     2521 tccaggaaga cgtcgccgct cttgcggcgg ttccacagct cgcccttcca ctgacccttg
     2581 gccttcaact cggcccacat ggcggaataa aaggcatcgt cgtggtggtc cgacttcagc
     2641 aggcgcggcg tctggccgac cgcttcctcg gccggatagc cggtgatctc ggtgaaggcg
     2701 gggttgaccg acaggatgat gccgttgggg tcggtgatga cgatgccttc gatgg
//
LOCUS       DATIKR010000142         1811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_123189, whole genome shotgun sequence.
ACCESSION   DATIKR010000142 DATIKR010000000
VERSION     DATIKR010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123189"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1668)
                     /locus_tag="VLL76_02140"
     CDS             complement(<1..1668)
                     /locus_tag="VLL76_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV28320.1"
                     /translation="MRDPVTTRDSELGRSEVKTTTCYMCACRCGIKVHIRDGEVRYIE
                     GNPDHPLNHGVICAKGASGIMKQYSPARLTKPLKRKEGAERGINAFEPIEWDEAFSIL
                     EQRLGHIRATDPRKLALFTGRDQMQALTGMWAKQFGTPNYAAHGGFCSVNMAAGLIYT
                     YGGSFWEFGGPDLDRAKLFVMIGTAEDHHSNPMKIALGKFKKNGGRFIAVNPVRTGYA
                     AIADEWVPIRPGTDGALLLAITHEIIETGLFDREFLIQYSNSAELVNLNEDSDDYGLF
                     VRDANVPVRPDTFDTPDRLWWDRHTDKPVLARSEGTDGRLMGEYKMPDGTPVKPAFQL
                     LKDRVKEYTPEWAETITGIPAATIRRLAHEMGVTARDHKIELPISWTDAWGREHDKVT
                     GNPVAFHSMRGLAAHSNGFQTIRALGVLMSILGTIDRPGGFRHRAPFPRPIPPCPKPP
                     KSSKAIQPNHPLEGTPLGWPADPDDLAVDENGQPLRIDKGFSWEYPLSVHGLMHNVIT
                     NAWRGDPYKIDTLFLFMANMAWNSSMNTSAVREMLTDKDENGEYKIPF"
BASE COUNT          257 a          557 c          654 g          343 t
ORIGIN      
        1 gaacgggatc ttgtattcgc cgttctcgtc cttgtcggtc agcatctcgc ggaccgccga
       61 ggtgttcatg ctcgagttcc acgccatgtt ggccatgaac aggaacaggg tgtcgatctt
      121 gtagggatcg ccgcgccacg cattggtgat gacgttgtgc atcaggccgt ggaccgacag
      181 cgggtattcc cacgagaagc ccttgtcgat gcgcagcggc tggccgttct cgtccaccgc
      241 caggtcgtcg ggatcggccg gccagcccag cggcgtgcct tccagcgggt ggttcggctg
      301 gatcgccttg ctggacttcg gcggcttggg gcagggcggg atcgggcgcg ggaacggcgc
      361 gcggtggcgg aagccgccgg gccggtcgat ggtgcccagg atgctcatca gcacgcccag
      421 ggcgcggatg gtctggaagc cgttggaatg ggccgccagg ccgcgcatgg aatggaacgc
      481 caccgggttg ccggtgacct tgtcgtgctc gcggccccag gcgtcggtcc acgagatcgg
      541 cagctcgatc ttatggtcgc gggcggtgac gcccatctcg tgcgccaggc ggcggatggt
      601 ggcggcggga atgccggtga tggtctcggc ccattccggg gtgtattcct tgacgcgatc
      661 cttcagcaac tggaacgccg gcttgaccgg ggtgccgtcg ggcatcttgt actcgcccat
      721 caggcggccg tcggtgccct cgctgcgcgc cagcaccggc ttgtcggtgt ggcggtccca
      781 ccacaggcgg tcgggcgtgt cgaaggtgtc gggacgcacc ggcacgttgg cgtcgcgcac
      841 gaacaggccg taatcgtcgc tgtcctcgtt gaggttcacc agctcggccg agttcgagta
      901 ctggatcagg aactcgcggt cgaacaggcc ggtctcgatg atctcgtggg tgatggccag
      961 cagcagggca ccgtcggtgc cgggacggat gggaacccat tcgtcggcga tggcggcata
     1021 gccggtgcgc accgggttga cggcgatgaa gcggccgccg ttcttcttga acttgcccag
     1081 cgcgatcttc atcgggttcg agtgatggtc ctcggcggtg ccgatcatca cgaacagctt
     1141 ggcgcggtcg aggtcggggc cgccgaactc ccagaagctg ccgccatagg tgtagatcag
     1201 gccggccgcc atgttgaccg agcagaagcc gccatgggct gcgtagttgg gcgtgccgaa
     1261 ctgcttggcc cacatgccgg tcagggcctg catctggtcg cggccggtga acagggccag
     1321 cttgcgcggg tcggtggcgc ggatgtggcc caggcgctgc tccaggatcg agaacgcctc
     1381 gtcccactcg atgggctcga acgcgttgat gccgcgctcg gcgccttcct tgcgcttcaa
     1441 cggcttggtc aggcgggcgg gcgagtactg cttcatgatg cccgacgcgc ccttggcgca
     1501 gatcacgcca tggttcagcg gatggtcggg gttgccttcg atgtagcgga cttcgccgtc
     1561 gcggatgtgc actttgatgc cgcagcggca ggcacacatg tagcaggtgg tggtcttgac
     1621 ttccgaacgg ccgagctcgg agtcgcgggt ggtgacggga tccctcatgc catctcctgg
     1681 acgctggcgc gcagttcccg aggaggcaaa gggcaggcaa ccccgcccgg cccattgcgg
     1741 ccgagcgcgc ggtctcccaa cgatgttccc gtccctgttt cctcggccgt gcggccttat
     1801 ttgacgggct a
//
LOCUS       DATIKR010000143         1974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_183429, whole genome shotgun sequence.
ACCESSION   DATIKR010000143 DATIKR010000000
VERSION     DATIKR010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183429"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /locus_tag="VLL76_02145"
     CDS             complement(<1..741)
                     /locus_tag="VLL76_02145"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HSV28321.1"
                     /translation="MAGIPFDDRDGTIWFDGKLIPWRDAKVHVLTHGLHYGSCVFEGE
                     RAYGGKVFKLTEHSDRLVKSGEVLGMKIPYSVAEIDAATIETLKASGIDDAYIRPVAW
                     RGSEMMGVAAQNNTIHLAIAVWAWPSYWSPEARMRGIRLNISDWRRPHPQTAPTAAKA
                     AGLYMICTMSKHKAESEGFEDSMMLDWRGQVAEATGANIFFVMDGELHTPLPDCFLNG
                     ITRQTVIDLAKKRGIKVVERAIMPEELTK"
     gene            832..1326
                     /locus_tag="VLL76_02150"
     CDS             832..1326
                     /locus_tag="VLL76_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV28322.1"
                     /translation="MTDIKTGINPLFLREEELRQGIELLFYAYRDFTAEPDAMLAEYG
                     FGRAHHRVIYFVGRNPGMTVSDLLAILRITKQSLSRVLGQLVEEGFITQRPGLRDRRQ
                     RLLELTEKGVELERQLTERQRARLARAYREAGAEAVEGFRKVMLGLIDEDDRPRFPAR
                     GARR"
     gene            1468..>1974
                     /locus_tag="VLL76_02155"
     CDS             1468..>1974
                     /locus_tag="VLL76_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28323.1"
                     /translation="MDDMPHILVVDDDTRLRELLRKYLADNGYVVTVAADAGEARSKL
                     AALEFDLIVLDVMMPGEDGLSLTRDLRKSNPVPILLLTAMSEVDDRIRGLESGADDYL
                     PKPFEPRELLLRIASILRRVPKAEPEAAREMRFGPLTWNVERAELKKDGDMVHLTTAE
                     SQLMTILAE"
BASE COUNT          337 a          639 c          660 g          338 t
ORIGIN      
        1 cttggtcaac tcttccggca tgatggcgcg ctcgaccacc ttgatgccgc gcttcttggc
       61 caggtcgatc acggtctggc gggtgatgcc gttcaggaag cagtcgggca gaggggtgtg
      121 aagctcgccg tccatcacga agaagatgtt ggcgccggtg gcctcggcga cctggccgcg
      181 ccagtccagc atcatggaat cctcgaagcc ctcgctctcg gccttgtgct tgctcatggt
      241 gcagatcatg tacaggccgg ccgccttggc ggcggtgggg gcggtctgcg ggtgcgggcg
      301 gcgccagtcc gagatgttga ggcgaatgcc gcgcatgcgg gcctcgggcg accaatagct
      361 gggccacgcc cacacggcga tggccaggtg gatggtgttg ttctgggcgg cgacgcccat
      421 catctcgctg ccgcgccagg cgaccgggcg gatataggcg tcgtcgatgc cgctggcctt
      481 cagggtctcg atggtggcgg cgtcgatctc ggcgacggaa taggggatct tcatgcccag
      541 cacttcgccg gacttgacca ggcgatcgga gtgctcggtc agcttgaaca ccttgccgcc
      601 ataggcgcgc tcgccctcga acacgcacga accgtaatgc aggccgtggg tcagcacgtg
      661 gaccttggcg tcgcgccagg gaatcagctt gccgtcgaac cagatggtgc cgtcgcggtc
      721 gtcgaagggg atgccagcca tgggatgaat ccgtccggga aaaagggtgt acggtcagaa
      781 agttaccgtt tgatcttgcc tggggtaaca tttataggcc attatgtcaa catgactgac
      841 ataaaaaccg gcatcaaccc tcttttcctg cgcgaggagg agctgcggca aggcatcgaa
      901 ctgctgttct acgcctaccg cgacttcacc gccgagcccg acgccatgct ggcggaatac
      961 ggtttcgggc gggcgcatca ccgggtcatc tatttcgtcg gccgcaatcc cggcatgacg
     1021 gtgtcggatc tgctcgccat cctgcgcatc accaagcaat cactatcaag ggtgctgggg
     1081 cagttggtgg aagagggctt catcacccag cgtcccggcc tgcgcgaccg ccgccagcgc
     1141 ctgctggaac tgacggaaaa gggcgtcgag ctggagcgcc aactgaccga gcgccagcgc
     1201 gcccgcctgg cccgcgccta tcgcgaagcc ggcgccgagg cggtcgaggg cttccgcaag
     1261 gtcatgctgg gcctgatcga cgaggacgac cgcccccgct tcccggcacg cggcgcgagg
     1321 cgctaatgcc tttggcggcg gcccctccgg ggcgagccag gctcagacgc cgctcgggct
     1381 tgtcgccttt cccgctctga gtaggtcaga gcgggaaagg ctccagatcc cttgacttgc
     1441 cggcccccat ccggcttgct catcggcatg gacgacatgc cccacatcct ggtggtcgac
     1501 gacgacaccc gcctgcgcga gctgctgcgc aagtacctgg ccgacaacgg ctatgtggtc
     1561 accgtcgccg ccgacgcggg cgaggcgcgg tccaagctgg cggcgctgga attcgacctc
     1621 atcgtgctgg acgtgatgat gccgggagag gatggtctgt cgctgacccg cgacctgcgc
     1681 aagagcaacc cggtgccgat cctgctgctg accgccatga gcgaggtgga cgaccgcatc
     1741 cgcggcctgg aaagcggcgc cgacgactat ctgcccaagc cgttcgaacc gcgtgagctg
     1801 ctgctgcgca tcgccagcat cctgcgccgc gtccccaagg ccgagcccga ggccgcccgt
     1861 gaaatgcggt tcggcccgct gacctggaac gtcgagcgcg ccgaactgaa gaaggacggc
     1921 gacatggtcc acctgaccac cgccgaaagc cagttgatga cgatcctggc cgag
//
LOCUS       DATIKR010000144         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_111139, whole genome shotgun sequence.
ACCESSION   DATIKR010000144 DATIKR010000000
VERSION     DATIKR010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111139"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VLL76_02160"
     CDS             <1..351
                     /locus_tag="VLL76_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28324.1"
                     /translation="AAAEQLDRVSNYLRQSDWNDILVGAENFARRQPYWFVGGAVAAG
                     FLMARFLKSSGGMEAIEQGGYASRRRTAQPSASTYTGGSTTAPGYGSSTTSPYTTTMP
                     GTTTTPAAGTGDLT"
     gene            348..740
                     /locus_tag="VLL76_02165"
     CDS             348..740
                     /locus_tag="VLL76_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HSV28325.1"
                     /translation="MNDIHPDRSLASLFTELSRELGTLFRQEIQLAKVEATEKAKQAG
                     AGAAEVAVGGLILFVAFQALVATAILGLSYVVEPWLAALIVAVAIAVVGAVVLAKGLS
                     NLRGDNLTPRRTIDTLRANTQWAKEQLR"
     gene            737..1675
                     /locus_tag="VLL76_02170"
     CDS             737..1675
                     /locus_tag="VLL76_02170"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HSV28326.1"
                     /translation="MKTDDIQEEIERTRDEMASTLNAIEQKLSPRQLMDQAVDTMREI
                     ASDQSRVGAVVRDNPIPLALIGLGLGWLAISGMSSGRRSSRIDEEEGADYGSYESYEG
                     VGLESTTSSSAWATPSTTGTSASGGYASSMQSGGYSDYTGSGGGISTGGNGHGIRERA
                     GEVAGQARQNISRATERTRQRVGDWSRSARSQASMAADRTWEAYQEHPISMGFLAMMM
                     GAAIGAILPRSRKEQEVMGSTARGVLGQARQAAGDIAERAGHVAEKAVETAREQGKEA
                     IREVTEASKDEAKRQGLTGGASTSSTTTPSGSTLTH"
BASE COUNT          316 a          632 c          579 g          229 t
ORIGIN      
        1 gccgccgccg aacagcttga ccgggtatca aattacctgc gccaaagcga ctggaacgac
       61 atcctggtcg gcgccgagaa cttcgcccgc cgccagccct attggttcgt cggcggcgcg
      121 gtggcggccg gcttcctgat ggcgcgcttc ctcaagagct cgggcggcat ggaggcgatc
      181 gagcagggcg gctacgcctc gcgccgccgc accgcccagc cctcggcctc gacctatacc
      241 ggcggatcga ccaccgcgcc cggctacggc agctccacca cctcgcctta caccacgacg
      301 atgcccggca ccaccaccac gccggcggcg ggcacgggag atttgacatg aacgacatcc
      361 atcctgaccg ctcgctggca tccttgttca ccgaactcag ccgcgagttg ggcaccctgt
      421 tccgccagga gatccaactc gccaaggtcg aggccaccga gaaggccaag caggccggcg
      481 ccggcgccgc cgaggtggcg gtcggcggcc tgatcctgtt cgtcgccttc caggcgctgg
      541 tggcgaccgc catcctgggg ctgtcctatg tggtcgaacc atggctggcg gccttgatcg
      601 tcgccgtcgc catcgcggtg gtgggggcgg tggtgcttgc caagggccta tcgaacctgc
      661 gcggcgacaa cctgacgcca cgccgcacca tcgacacgct gcgggccaac acccaatggg
      721 ccaaggagca gttgcgatga agacggacga catccaggag gagatcgagc gtaccaggga
      781 cgagatggcc tcgaccctga atgccatcga acagaagctc tctccacggc aactcatgga
      841 tcaggcggtg gacaccatgc gcgaaatcgc tagcgaccaa tcccgcgtcg gcgccgtcgt
      901 gcgcgacaat cccatccccc tggccctgat cggcctggga ctcggctggc tggccatctc
      961 gggcatgagc tcgggccggc gctccagccg gatcgacgaa gaggaagggg ccgattacgg
     1021 cagctacgaa agctatgaag gggtcgggct ggaaagcacg acctcgagtt cggcctgggc
     1081 gacgccgtcc accacgggga ccagcgcttc gggcggctac gcctcgtcga tgcagtccgg
     1141 cggctattcc gactacaccg gctcgggcgg cggcatcagc accggcggca acggccacgg
     1201 tatccgcgaa cgtgccggcg aggtcgccgg ccaggcccgc cagaacatca gccgtgccac
     1261 cgagcgcacc cgccagcgcg tcggcgactg gagccgttcg gcccgcagcc aggccagcat
     1321 ggccgccgac cgcacctggg aggcctatca ggagcacccc atcagcatgg gcttcctcgc
     1381 catgatgatg ggcgccgcca tcggcgccat cctgccgcgg tcgcgcaagg aacaggaagt
     1441 gatgggcagc accgcccgcg gcgtactcgg ccaggcccgc caggccgccg gcgacatcgc
     1501 cgaacgcgcc ggccatgtgg cggaaaaggc ggtcgaaacc gcccgcgagc agggcaagga
     1561 ggccatccgc gaggtcaccg aggccagcaa ggatgaagcc aagcgccagg gactgaccgg
     1621 cggcgcctcg acgtcttcga cgaccacccc gtccggctcc accctgaccc attgaggagc
     1681 gttccatggc gaacggccat gcccggacgc acggccacac ggccaaccgg ccttcggaca
     1741 ttccgaaggc cggttg
//
LOCUS       DATIKR010000145         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_147720, whole genome shotgun sequence.
ACCESSION   DATIKR010000145 DATIKR010000000
VERSION     DATIKR010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147720"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VLL76_02175"
     CDS             complement(<1..189)
                     /locus_tag="VLL76_02175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28327.1"
                     /translation="MIKRRRRKGFLEDFRLSETYLVKPDRKLGRPGILEGEDGQGNSV
                     LIKIWPVVAKGDDEDLREI"
     gene            complement(424..499)
                     /locus_tag="VLL76_02180"
     tRNA            complement(424..499)
                     /locus_tag="VLL76_02180"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(464..466),aa:Phe,seq:gaa)
     gene            complement(574..753)
                     /gene="yacG"
                     /locus_tag="VLL76_02185"
     CDS             complement(574..753)
                     /gene="yacG"
                     /locus_tag="VLL76_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012171668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HSV28328.1"
                     /translation="MKPANTNRPCPVCGKASELKYQPFCSARCADVDLHRWLGGVYRV
                     ETNERPEDEGRRDEE"
     gene            complement(750..>1649)
                     /locus_tag="VLL76_02190"
     CDS             complement(750..>1649)
                     /locus_tag="VLL76_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HSV28329.1"
                     /translation="PEEGVVVRTAAARASEADLVAELDALRADWAVIDQRRHGKPPDV
                     VWRPDPLAALLAEHPAVERVWVDDAAAFAAARARFGEVVARAAGDAFTLHDADEAFDQ
                     ALAPSVALPCGGRVTFETTAALTAIDVDSGPAGANEANAQAVAVIARHVRLRSLGGQM
                     AVDFVSGGGKGAIARLAAALKEAVAADPVPTHVFGVSPLGLVELTRERRGPALAELMW
                     EVEHRPTTEAAALSALRRAMAEAAHRPGRGLVLVVAADVAADLTRRPAALAEAEQRLG
                     RPLTIRAEPGRAREDVTIEETIR"
BASE COUNT          266 a          564 c          549 g          270 t
ORIGIN      
        1 tatttcgcgt agatcctcgt cgtcaccttt cgcgaccacg ggccagattt tgataaggac
       61 agagtttccc tgcccatcct ctccctcaag gatgccaggc cgacccaatt tccgatccgg
      121 ttttactagg tacgtttcgg acagccgaaa atcttccaaa aaccctttcc gccgtcggcg
      181 tttgatcatg ctcgatcccc tgctgcccta cgacctacca ctcctcacag gcgtgcacgc
      241 ctattagttt gactagatta atcacgcatg gcttcaaccg ggaagtcaaa atctgagaac
      301 cgtccggtgc ttatcttccc cgaaagcgat gcccactgtc ccggcagtgt cccgcaaatt
      361 ccttcgatgg actttggaaa aaaacaaaac ccccgaaagg cgttaccttt caggggttta
      421 gcatggtgcc cagggccgga atcgaaccag cgacactgcg attttcagtc gcatgctcta
      481 ccaactgagc tacctgggca ccggtcgccg tggcgaagag gaggcgctta taacgggttt
      541 ccggggggct ggcaagccct tcgctgagga tttttattct tcgtcgcggc ggccttcgtc
      601 ctcggggcgt tcgttggtct cgacgcgata gactccgccc agccagcggt gcaggtcgac
      661 gtcggcgcag cgggcggaac agaagggttg gtacttcaat tcgctggcct tgccgcagac
      721 ggggcaaggg cggttggtgt tggcgggttt caccgaatcg tctcctcgat ggtcacatcc
      781 tcgcgcgcgc ggccgggctc ggcgcgaatg gtcagcgggc gacccaggcg ctgttcggcc
      841 tcggccaaag cggcggggcg gcgggtcagg tcggcggcga cgtcggcggc caccaccagc
      901 accaggcccc tgcccggccg gtgcgccgcc tcggccatgg cccggcgcag agccgacagg
      961 gcggcggcct cggtggtggg gcggtgctcg acctcccaca tcagctcggc caaggcgggg
     1021 ccgcgccgtt cgcgggtcag ttccaccagg cccagcggcg acacgccgaa cacatgggtg
     1081 ggcaccgggt cggccgccac cgcctccttc aatgcggcgg ccaggcgggc gatggcgccc
     1141 ttgccgccgc ccgacacgaa atccaccgcc atctggccgc ccaacgaccg cagccgcaca
     1201 tggcgggcga tcaccgccac cgcctgggcg ttggcttcgt tggcgccggc ggggccggaa
     1261 tccacgtcga tggcggtcag cgccgccgtc gtctcgaagg tgacgcggcc gccgcaaggc
     1321 aaggcgacgg acggggcgag cgcctggtcg aacgcctcgt cggcatcgtg cagggtgaag
     1381 gcatccccgg cggcgcgggc caccacttcg ccgaagcggg cgcgggcggc ggcgaaggcg
     1441 gcggcatcgt ccacccagac gcgctcgacg gcgggatgct cggccagcag ggcggccagc
     1501 ggatcggggc gccagaccac gtccggcggc ttgccgtggc ggcgctggtc gatgacggcc
     1561 cagtcggcgc gcagggcgtc aagctcggcc accaaatccg cctcggacgc ccgggcggcg
     1621 gcggtgcgca ccaccacgcc ctcctcggg
//
LOCUS       DATIKR010000146         2689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_75046, whole genome shotgun sequence.
ACCESSION   DATIKR010000146 DATIKR010000000
VERSION     DATIKR010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75046"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VLL76_02195"
     CDS             complement(<1..252)
                     /locus_tag="VLL76_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28330.1"
                     /translation="MGGIRGLIAVVAAVLLLCGLPARAQVLVSGAADRVLLDGHLEFL
                     EGDGAVAEVTARAFEPGTRPGLAPGVVWYRFTVRREAGTP"
     gene            complement(284..>2689)
                     /locus_tag="VLL76_02200"
     CDS             complement(284..>2689)
                     /locus_tag="VLL76_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HSV28331.1"
                     /translation="LQDAEDWDGIVAMAREQVKEGSHTLDVCTAFVGRNEVRDMTEVV
                     SRLRGSVTTPLVIDSTELPVLEAALKLYGGKAILNSINFENGEHEAEARLKLAKKFGA
                     AVVALTIDEEGMAKDCEAKLRIAKRLYDFAVTKHGLPPGDLLFDPLTFTICTGNQDDR
                     RLGVETLDAIARISKEMPECGIVLGLSNISFGLKPAARQVLNSVFNDHAVKRGMTGAI
                     VHVSKILPLHTLAAEEVKVAEDLIFDRRAEGYDPLQAFIALFGDRKAADMKKELPANV
                     EDRLKQRIIDGDRTGLDADLAEAMGAGWKPLDIINNLLLDGMKVVGELFGSGKMQLPF
                     VLQSAETMKAAVAWLEPHMEKADGQAKATIVLATVKGDVHDIGKNLVDIILTNNGYKV
                     HNIGIKMPVGDIIKAAREHKADAIGMSGLLVKSTVIMRENLEEMTAAGIDIPVLLGGA
                     ALTRKYVEEDCRAAYGSGRVAYARDAFDGLDLMAKVADGSFDGHVEARAAAPKSGNTK
                     RIGQPAEAAQRPVDWDEVNIRRAELHKDVPVPTPPFWGARVIENVPLQNLAGFLNETM
                     LYQFHWGYKKQGRSIDEFKAWAAKELRPIAHNLLKRCEKEGILKAQGVYGYWKAASAG
                     DSVILFAEDGTTEVARFAFPRQNKEGGVSLADFFRPVDSGQRDVIGLQVVTMGKHATE
                     VAHDWFKADKYQDYLYLHGLSVEMAEAMAEYVHKRIRTELGFAAEEAADMDKLLKQHY
                     RGSRYSFGYPACPNVEDQTQLLKLLGADRIGITLSDEFQLEPEQSTSAIVTVHPQAKY
                     FSV"
BASE COUNT          400 a          901 c          900 g          488 t
ORIGIN      
        1 gggcgtccca gcctcgcgcc gcacggtgaa gcggtaccac accacgccgg gggccaggcc
       61 gggacgggtg cccggctcga aggcgcgagc ggtcacctcg gccaccgcgc cgtcgccttc
      121 caggaattcc aggtggccgt ccagcaggac gcggtcggcg gcgccggaca ccagcacctg
      181 ggcgcgggcg ggcaggccgc acagcagcag caccgccgcc accaccgcga tcagaccgcg
      241 aatgcccccc atgacgcccc cagtgcccag gtccccaccc ggcctacacg ctaaagtatt
      301 tcgcctgcgg gtgcacggtc acgatggcgc tggtgctctg ttccggctcc aactggaact
      361 cgtcggacaa ggtgatgccg atgcggtcgg cgcccagcag cttcagcaac tgggtctggt
      421 cctcgacatt ggggcaggcc ggatagccga aggaatagcg gctgccgcga taatgctgct
      481 tcagcagctt gtccatgtcg gccgcctctt ccgccgcgaa gcccagttcg gtgcggatcc
      541 gcttgtggac gtattccgcc atggcctcgg ccatctccac cgacaggccg tgcaggtaca
      601 ggtaatcctg gtatttgtcg gccttgaacc agtcgtgggc cacctcggtg gcgtgcttgc
      661 ccatggtcac cacctgcagg ccgatgacgt cccgctggcc gctgtccacc ggccggaaga
      721 agtcggccag cgacacgccg ccctccttgt tctggcgcgg gaaggcgaag cgggcgacct
      781 cggtggtgcc gtcctcggcg aacaggatga cgctgtcgcc ggccgaggcc gccttccaat
      841 agccgtagac gccctgggcc ttgaggatgc cttccttctc gcagcgcttc agcaggttgt
      901 gggcgatggg ccgcagctcc ttggcggccc aggccttgaa ctcgtcgatg gaacggccct
      961 gcttcttgta gccccagtgg aactggtaaa gcatggtctc gttgaggaag ccggccaggt
     1021 tctgcagcgg cacgttctcg atgacccgcg ccccccagaa cggcggagtg gggacgggga
     1081 cgtccttatg cagttcggcg cggcggatgt tgacctcgtc ccagtcgacg gggcgctgcg
     1141 ccgcctcggc cggctggccg atgcgcttgg tgttgccgga tttgggcgcg gcggcgcggg
     1201 cctcgacgtg gccgtcgaac gagccgtcgg cgaccttcgc catcagatcg aggccgtcga
     1261 aggcgtcgcg ggcataggcc acccggcccg agccataggc ggcgcggcaa tcctcctcca
     1321 catacttgcg tgtcagggcg gcaccgccca gcagcaccgg gatgtcgatg ccggcggccg
     1381 tcatctcttc caggttttcg cgcatgatga cggtggactt gaccagcagg cccgacatgc
     1441 cgatggcgtc ggccttgtgc tcgcgggcgg ccttgatgat gtcgcccacc ggcatcttga
     1501 tgccgatgtt gtgcaccttg tagccgttgt tggtgaggat gatgtccacc aggttcttgc
     1561 cgatgtcgtg gacgtcgccc ttgacggtcg ccagcacgat ggtcgccttg gcctgtccgt
     1621 cggccttctc catgtggggt tccagccacg ccacggcggc cttcatggtc tcggccgatt
     1681 gcagcacgaa cggaagctgc atcttgcccg agccgaacag ctcgcccacc accttcatgc
     1741 cgtccagcag caggttgttg atgatgtcga gcggcttcca gccggcgccc atggcctcgg
     1801 ccagatcggc atccaggccg gtgcggtcgc cgtcgatgat gcgctgcttc aggcgatcct
     1861 cgacgttggc cggcagctcc ttcttcatgt cggcggcctt gcggtcgccg aacagggcga
     1921 tgaaggcctg caacgggtcg taaccttcag cgcggcggtc gaagatcaga tcctcggcca
     1981 ccttcacttc ctcggcggcc agggtgtgca gcggcaggat cttggacaca tgcacgatgg
     2041 cgccggtcat gccgcgcttg accgcatggt cgttgaacac cgaattcagc acctggcggg
     2101 cggcgggctt gaggccgaac gagatgttcg acaggcccag cacgatgccg cattcgggca
     2161 tttccttgga aatgcgcgcg atggcgtcca gcgtctcgac gcccaggcgc cggtcgtcct
     2221 ggttgccggt gcagatggtg aaggtcagcg ggtcgaacag cagatcgccg ggcggcaggc
     2281 cgtgcttggt gacggcgaag tcgtaaagcc gcttggcgat gcgcagcttg gcctcgcaat
     2341 ccttggccat gccctcttcg tcgatggtca gcgccaccac ggcggcgccg aacttcttgg
     2401 ccagcttcag gcgcgcttcg gcctcgtgct cgccgttctc gaagttgatc gaattgagga
     2461 tggccttgcc gccatagagc ttcagcgccg cttccagcac cggcagctcg gtggaatcga
     2521 tcaccagggg ggtggtgacg gagccgcgca ggcggctcac cacctcggtc atgtcgcgca
     2581 cttcgttgcg gccgacgaag gcggtgcaga cgtccagcgt gtggctgcct tccttcacct
     2641 gctcgcgcgc catggcgacg atgccgtccc agtcctcggc gtcctgcag
//
LOCUS       DATIKR010000147         3386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_14014, whole genome shotgun sequence.
ACCESSION   DATIKR010000147 DATIKR010000000
VERSION     DATIKR010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14014"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..594)
                     /locus_tag="VLL76_02205"
     CDS             complement(<1..594)
                     /locus_tag="VLL76_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28332.1"
                     /translation="MRGVRIVAALLSLLALSSCYIPDKFRSELRLSRFGDYALSYEGE
                     LVYAPIMHDYVQGKITPENEQTRNDNIYKDLIRDPAFKSVERAGKGRFKVRYERTGRL
                     GKVQLSAILRRDAKLLSLKSTEDGGIIVDANGVKPADAQRMAELGIGMEGEFRVTTDG
                     KIVKHNATEVRSFGQYNVYVWKIENPLSPSPFLVMLRD"
     gene            complement(594..1388)
                     /gene="mazG"
                     /locus_tag="VLL76_02210"
     CDS             complement(594..1388)
                     /gene="mazG"
                     /locus_tag="VLL76_02210"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HSV28333.1"
                     /translation="MRPIDRLLSIMARLRDPAGGCPWDLEQTFATIAPYTIEEAYEVA
                     EAIEHGDMASLKDELGDLLFQVVFYAQMAKEQGDWDFDAVATAIADKMERRHPHVFGD
                     ADIPTAEAQTKAWEVVKAAERADKGSASVLDGVARTLPPMTRALKLQNRAARVGFDWA
                     KPADVLDKITEEVDEIKHEIAVHAAHDRLEDEMGDVLFACVNLARKLNIDPERALKRA
                     NAKFDRRFRHIESELQAQGSSPEASTLDEMEALWTQAKHLERNGGK"
     gene            complement(1674..2441)
                     /locus_tag="VLL76_02215"
     CDS             complement(1674..2441)
                     /locus_tag="VLL76_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV28334.1"
                     /translation="MKVTMLGTGAAGGVPSISRGWGNCDPNEPRNRRRRPSILVEDGD
                     TAILVDSGADCREQLLDAGVRRLDAVLYTHDHADHLHGIDDLREVNRAMAAPLPIRGS
                     AATLDAIRARFPYVLGAVEEGLSIYKPMLLPHVIHGPFTVGSIDVVPFDQDHGYCRTT
                     GFRFGPVAYSTDLVDLPEESFAALAGVDTWIVGCLTYNPHPTHAHLDKVLEWIDRVAP
                     RRAILTHMTPGMDYAALKARLPAHVEPGYDGQVLLSA"
     gene            complement(2438..3214)
                     /locus_tag="VLL76_02220"
     CDS             complement(2438..3214)
                     /locus_tag="VLL76_02220"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSV28335.1"
                     /translation="MLVDSHCHLDFPDFGDELDAVVERARASGVGIMLTINTHVTRFE
                     RVLAVAERFPDVYCTIGIHPHEAGNEPATDVKRLVEAASHPKVVGFGETGLDYFYDKS
                     PRDRQRDSFRVHIEAARRAGLPVIVHTRDADEDTAAILAEEMAKGAFTGLIHCFSSGP
                     QLAEKALDLGLYISISGIVTFKKAEALQQTVAGLPLERLLVETDCPYLAPIPFRGKRN
                     EPAYVAHTAAKVAELKGVSAEEVAQATTANFLNLFTKVRR"
BASE COUNT          558 a         1076 c         1137 g          615 t
ORIGIN      
        1 gtcgcgcagc atcaccagga agggtgacgg cgacagcggg ttctcgatct tccagacata
       61 gacgttgtac tgcccgaacg accgcacctc ggtggcgttg tgcttgacga tcttgccgtc
      121 ggtggtgacg cggaactcgc cttccatgcc gatgcccaat tcggccatgc gctgggcgtc
      181 ggccggcttg acgccgttgg cgtcgacgat gatgccgccg tcctcggtcg atttcagcga
      241 cagcagcttg gcgtcgcggc gcaggatggc tgacaattgg accttgccaa ggcgcccggt
      301 gcgctcgtaa cgcaccttga agcggccctt gccggcgcgt tccaccgatt tgaaggcggg
      361 atcgcggatc aggtccttat agatgttgtc gttgcgcgtc tgctcgtttt ccggggtgat
      421 cttgccctgg acgtagtcgt gcatgatggg ggcgtagacc agttcgccct cgtagctcag
      481 ggcgtaatcg ccgaagcgcg acaaccgaag ttccgagcgg aacttgtcgg ggatgtagca
      541 agaggacagg gcgagcaggg acagcaacgc cgcgacgatc cgcacacccc gcatcactta
      601 cccccgttcc gctccaagtg cttggcctgg gtccacaggg cttccatttc atccagtgtc
      661 gaggcctcgg ggctggagcc ttgggcctgc agttcggatt cgatgtggcg gaagcgccgg
      721 tcgaacttgg cattggcgcg cttcagggcg cgctcggggt cgatattgag cttgcgggcg
      781 aggttgacgc aagcgaagag aacgtcgccc atttcatcct cgagccggtc gtgggccgcg
      841 tgaaccgcga tttcatgttt gatttcatcg acttcctcgg tgatcttatc aaggacgtcg
      901 gccggcttcg cccagtcgaa tcccacccgg gcggcgcggt tctgcagctt caaggcccgc
      961 gtcatcgggg gcagggtgcg ggcgacgccg tcgagcacgc tggcggagcc cttgtcggca
     1021 cgctcggccg ccttgaccac ttcccaggcc ttggtctgcg cctcggcggt ggggatgtcg
     1081 gcgtcgccga acacatgcgg gtggcggcgc tccatcttgt cggcgatggc ggtggccacc
     1141 gcgtcgaaat cccagtcgcc ttgctccttg gccatctggg cataaaacac gacctggaag
     1201 agcaggtcgc caagctcgtc cttgaggctg gccatgtcgc catgctcgat ggcctcggca
     1261 acctcgtagg cctcctcgat ggtgtaaggc gcgatggtgg cgaaggtctg ttccagatcc
     1321 cacggacaac caccggcggg atcgcgcagc ctggccatga tggaaagcag tcggtcgatg
     1381 gggcgcatgg tatcagcctt ggaacagggc gagggtgccg ctaacgcatt ggccggcctc
     1441 attttgcccc atctaaatgt cgcataatgc atattatggc gtcgatgggc gcagaccggt
     1501 tgggcgccga acttggcgcc gtttggctat cggcgcaagt gcctacagct gccacaccca
     1561 tctgacgctc gaggaatgcc gccatgaacg gctcgccctc ggcggcatat gcgtccttgt
     1621 cccagcgcga gcatggcagg tcgaggccgg caggtccttg cgttcccaac cttctaggct
     1681 gacagcagga cctgcccgtc gtagccgggc tcgacatggg ccggcaaccg cgctttcaag
     1741 gcggcgtaat ccatgcccgg ggtcatgtgg gtcaggatgg cgcggcgcgg tgccacgcgg
     1801 tcgatccatt ccagcacctt gtccagatgg gcgtgcgtcg gatgcgggtt gtatgtcagg
     1861 cagccgacga tccaggtatc gacgccagcc agcgcggcga aggattcctc tggcagatcg
     1921 accaggtcgg tggaatacgc cacgggaccg aaacggaagc cggtggtgcg gcaatagccg
     1981 tggtcctggt cgaacggcac cacgtcgatg cttcccacgg tgaacggccc gtggatgaca
     2041 tgcggcagca gcatgggctt gtagatcgac agcccctcct ccaccgcgcc caggacatag
     2101 gggaatcgcg cccggatggc gtccagcgtg gctgccgagc cgcggatggg cagcggcgcc
     2161 gccatggcgc ggttgacttc ccgcaggtcg tcgatgccgt gcagatggtc ggcgtggtcg
     2221 tgtgtataca agaccgcatc caggcggcgc acgcccgcgt ccagcaattg ctcgcggcaa
     2281 tcggcgccgc tgtccaccag gatggcggtg tcgccgtcct ccaccaggat cgacggccgg
     2341 cggcggcggt tcctgggctc gttgggatcg caattgcccc agccgcgcga aatgctgggc
     2401 acgccgccgg cggcgccggt tcccagcatg gtcactttca tcgcctcacc ttggtgaaca
     2461 agttcaagaa gttggcggtc gtcgcttgcg ccacctcctc ggccgaaacc cccttcaatt
     2521 cggccacctt ggcggccgtg tgggcgacat aagccggttc gttgcgcttg ccgcgaaacg
     2581 ggatcggcgc cagatacggg caatcggttt cgaccagcaa cctttccagc ggcaagccgg
     2641 cgacggtctg ctgcagcgcc tcggccttct tgaaggtcac gatgcccgag atcgagatgt
     2701 aaagcccgag atcgagagcc ttttcagcca gttgcggacc ggagctgaag cagtgaatca
     2761 gtccggtgaa cgcacccttg gccatttcct cggccaggat ggcggcggtg tcctcgtcgg
     2821 cgtcgcgggt gtggacgatc accggcagcc cggcgcgacg cgcggcctcg atatggaccc
     2881 ggaacgagtc gcgctgccga tcgcgcgggc tcttgtcgta gaagtaatcc agcccggtct
     2941 cgccgaagcc caccaccttg ggatggctgg ccgcctcgac cagccgtttc acgtcggtcg
     3001 ccggctcgtt gccggcctcg tgcgggtgga tgccgatggt gcaataaacg tcggggaaac
     3061 gctcggccac cgccagcacc cgctcgaacc gggtgacgtg ggtgttgatg gtcagcatga
     3121 tcccgacgcc cgaggcacgg gcgcgctcga ccaccgcgtc caattcgtcg ccgaagtccg
     3181 ggaaatccag atggcagtgg ctgtccacca gcatcagacg gccccctcct cctcaacgaa
     3241 gcgcgggaac accccctggg gcgccggcag cggcgtgccg ggcttgagcg cgtggtgcga
     3301 gccgcagaaa tgcaggccgc gctggtccgc aggcaccgcc aactggtcca gcagccgggc
     3361 cgacgaatcg ggcatgaacg gctggg
//
LOCUS       DATIKR010000148         2058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_86949, whole genome shotgun sequence.
ACCESSION   DATIKR010000148 DATIKR010000000
VERSION     DATIKR010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86949"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VLL76_02225"
     CDS             complement(<1..428)
                     /locus_tag="VLL76_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSV28336.1"
                     /translation="MMDDLNSVNNQLRRTLALVLAGGRGSRLKSLTDWHAKPAVPIAG
                     KFRIIDFALSNCINSGIRRIGVITQYKAHSLIQHIQRGWGFLRGEFGEFVELLPAQQR
                     TETENWYTGTADAVFQNLDIIREHDPEYVLVLAGDHIYKM"
     gene            644..>2058
                     /gene="glgA"
                     /locus_tag="VLL76_02230"
     CDS             644..>2058
                     /gene="glgA"
                     /locus_tag="VLL76_02230"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HSV28337.1"
                     /translation="MRVLFASSEVYPLVKTGGLADVSGALPAALIEAGQDVKVLMPGY
                     PEAMDKAEGKRTVGSLGDPLGVGSEAKLVSAKLPGSGVPLWLIDCPALYNRPGGPYQD
                     SVGADWPDNPLRFGMLSWAAAHLCTEGSPVKWRPQVLHANDWQTGLAPAYLQAWDVVD
                     RPATAFTIHNIAYQGIFPAATVATLGLPASMYQMDGLEYWDQMSFLKAGLFYSDRITT
                     VSPRYAKEIQAAPHGCGMEGLLAWRSADLLGILNGADYGVWNPATDPHLAQPYKPADF
                     AKGKAANKAALQRELGLAENPDAPLMVIVSRLNDLKGMDMVLAVLPVLLREGAQLAVV
                     GTGDRALEESFRAAAARNPGQLAVNIGYSEPLAHRLMAAGDMLLMPSRFEPCGLTQFY
                     AFRYGCVPVVHSTGGLADTVMDTTYDSVMTGTATGFVFEHANAGAFQWCVERALGTFR
                     QKDQWRKIQKACVAQDFSWIRS"
BASE COUNT          335 a          684 c          690 g          349 t
ORIGIN      
        1 tccatcttgt agatgtggtc gccggccagg accaggacgt attccgggtc gtgctcgcgg
       61 atgatgtcca ggttctggaa cacggcgtcg gcggtgccgg tgtaccagtt ctcggtctcg
      121 gtgcgctgct gcgccggcag caattcgacg aactcgccga actcgccgcg caggaagccc
      181 cagccgcgct ggatgtgctg gatcagcgaa tgcgccttgt actgggtgat gacgccgatg
      241 cggcggatgc ccgagttgat gcagttggat agggcgaagt cgatgatacg gaacttgccg
      301 gcgatgggca ccgccggctt ggcgtgccag tcggtcaagg acttgaggcg cgagccccgt
      361 ccgccggcca ggaccagcgc cagcgtgcgg cgcaactggt tgttgaccga gttcaggtcg
      421 tccatcatct ctcgcccctc tccaagacgt ttgcgctggg aaaggtcctc accccaccgg
      481 gaccctggat tttcatcgac cgtgccacaa tctctggcgc cacacaacaa cgggcggcga
      541 gatttgcggg cattcacaaa ggggtaacac cgacgttaag cgccttttat gaagcgcggg
      601 cttgggctag gcttgaaacc agcgaataag gggacgtccg gccatgcgcg tgttgtttgc
      661 ttcctccgag gtctatccgc tggtcaagac gggcggtctc gccgatgtgt cgggagccct
      721 accggcggcg ctgatcgagg ccggccagga cgtcaaggtg ctgatgcccg gctaccccga
      781 ggccatggac aaggccgagg gcaagcgcac cgtcggcagc ctgggcgatc ctttgggtgt
      841 cggctccgag gccaagctgg tgtcggccaa gctgcccggc agcggcgtgc cgctgtggct
      901 gatcgactgc ccggcgctgt acaaccggcc cggtggcccg taccaggatt cggtcggcgc
      961 cgactggccc gacaacccgc tgcgcttcgg catgctgtcg tgggcggcgg cgcatctgtg
     1021 caccgagggc agcccggtca agtggcggcc ccaggtgctg catgccaacg actggcaaac
     1081 cggcctggcg ccggcctatc tgcaggcgtg ggacgtggtg gaccggccgg ccaccgcctt
     1141 caccatccac aacatcgcct atcagggcat cttcccggcc gcgaccgtgg ccacgctggg
     1201 cctgccggcc tccatgtacc agatggacgg cctggaatac tgggaccaga tgtcgttcct
     1261 gaaagccggc ctgttctaca gcgaccgcat caccaccgtc agcccgcgct atgccaagga
     1321 gatccaggcg gcgccccacg gctgcggcat ggaggggttg ctggcatggc gctcggcgga
     1381 ccttctgggc atcctcaacg gcgccgatta cggcgtgtgg aacccggcca ccgacccgca
     1441 tctggcgcag ccctacaagc ccgccgactt cgccaagggc aaggccgcga acaaggcggc
     1501 gttgcagcgc gaactgggcc tggcggaaaa tcccgacgcg ccgctgatgg tgatcgtcag
     1561 ccgcctcaac gacctcaagg gcatggacat ggtgctggcg gtgctgccgg tgctgctgcg
     1621 cgagggcgcc cagttggcgg tggtcggcac cggcgaccgt gcgctggaag aatcgttccg
     1681 cgccgccgcc gcccgcaacc ccggtcaact ggcggtcaac atcggctatt ccgaaccgct
     1741 ggcccaccgc ctgatggcgg ccggcgacat gctgctgatg ccgtcgcggt tcgaaccctg
     1801 cggcctgacc cagttctatg ccttccgcta cggctgcgtg ccggtggtcc actccaccgg
     1861 cggcctggcc gacacggtga tggacaccac ctatgacagc gtcatgaccg gcaccgccac
     1921 cggcttcgtc ttcgagcacg ccaatgccgg cgccttccaa tggtgcgtcg agcgcgcgct
     1981 cggcacgttc cggcagaagg accagtggcg caagatacag aaggcctgtg tggcccagga
     2041 tttcagttgg atccgctc
//
LOCUS       DATIKR010000149         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_38737, whole genome shotgun sequence.
ACCESSION   DATIKR010000149 DATIKR010000000
VERSION     DATIKR010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38737"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VLL76_02235"
     CDS             complement(<1..717)
                     /locus_tag="VLL76_02235"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV28338.1"
                     /translation="MTTLRQMRCLTALAETLNFRRAAERVHLSQPALSAQIALMEEKL
                     GVLLVERTRRRVLLTPVGREVAERARAILRDVSELEEVARQSQAPLSGTLRVGVLRTL
                     GPYLLPHILPAMRRLYPDLKLYLREEPREQLLMDLGHGDLDMALMASAPRDDSHLTVT
                     PMFEEPLWATLPLGHRLSGRDRLVAADLAGEQLIMLEFGDGLRDPALELCKAGGAAEH
                     PDFRATSLDSLRQMVGTGLGT"
     gene            832..1710
                     /locus_tag="VLL76_02240"
     CDS             832..1710
                     /locus_tag="VLL76_02240"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF005143.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-32"
                     /protein_id="HSV28339.1"
                     /translation="MTTPRSSDPAAAFFRAVRDTPMLSGEEEAELIRRWKDEGDAAAR
                     NRLIESHLRLVVKTAATFRGYGLAVEDLVAEGNVGLVRALETFDADRNLRFSTYAQWW
                     VRAAMFEYVLKFSTPVGFGLSAERKRLFFKLRSAKARLTGPEGGALDAKDAAAIGREL
                     GAKDERVLEMEQLLTQAPRSLDAPATEGGASWGELMADDRPGIEEVLGERQELMYRRE
                     LLKHAWGELTDRERDIVAERTLRDKPLRLEDLAQRYNISRERVRQIEAAAMLKLKGLV
                     RAAEARLMPKTRTATS"
     gene            1725..>1812
                     /locus_tag="VLL76_02245"
     CDS             1725..>1812
                     /locus_tag="VLL76_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSV28340.1"
                     /translation="MQCPVCSVDLLMSERAGVEIDYCPKCRGV"
BASE COUNT          302 a          625 c          612 g          273 t
ORIGIN      
        1 ggtgcccagg ccggtgccga ccatctggcg caaggaatcc agcgacgtgg cgcggaagtc
       61 gggatgttcg gcggcgccgc cggccttgca cagttccagc gccgggtcgc gcaggccgtc
      121 gccgaattcc agcatgatca attgctcgcc ggccaggtcg gccgcaacca gccggtcgcg
      181 gccgctcagg cggtggccca ggggcagggt ggcccacagc ggctcctcga acatgggggt
      241 gacggtcagg tggctgtcgt cgcgcggcgc cgacgccatc aacgccatgt ccaaatcgcc
      301 gtggccgagg tccatcagca attgctcgcg cggctcctcg cgcaaataga gcttcagatc
      361 gggataaagc cggcgcatgg ccggcaggat gtggggcagc aggtacggcc ccagggtccg
      421 cagcacgccg acccgcaacg tgcccgacag cggcgcctgc gattgccgcg ccacctcttc
      481 cagttcggag acgtcgcgca ggatggcgcg ggcgcgctcg gccacctcgc ggcccaccgg
      541 cgtcagcagc acccgtcgcc tggtgcgctc gaccagcagc acgcccaact tttcctccat
      601 cagcgcgatc tgggccgaca gcgccggctg cgacagatgc acgcgctcgg cggcgcggcg
      661 gaagttgagg gtctcggcaa gcgcggtcag gcagcgcatc tggcgaagag tggtcatggc
      721 ctattgatag gaaatggtta ttaaaagcgc aagacatatc gattggcatt atcagatgcc
      781 gcgccttagt ttcataagcg tggacgacac cactgaattc ggagccgcca gatgactacc
      841 ccccgttcct cggaccccgc cgccgctttc ttcagggccg tgcgcgacac cccgatgctg
      901 tcgggcgagg aagaggccga gctgatccgt cgctggaagg acgagggcga cgccgccgcc
      961 cgcaaccgcc tgatcgagtc ccacctgcgc ctggtggtca agaccgccgc caccttccgg
     1021 ggctacggcc tggccgtcga ggacctggtg gccgagggca atgtcggcct ggtgcgcgcg
     1081 ctcgaaacct tcgacgccga ccgcaacctg cgcttctcca cctatgccca gtggtgggtg
     1141 cgtgccgcca tgttcgaata cgtcctgaag ttctcgaccc cggtgggctt cggcctgtcg
     1201 gccgagcgca agcgcctgtt cttcaagctg cgcagcgcca aggcccgcct gaccggcccc
     1261 gagggcggcg cgctcgacgc caaggacgcc gccgccatcg gccgcgaact gggcgccaag
     1321 gacgagcgcg tgctcgagat ggagcaattg ctgacccagg cgccgcgttc gctcgacgcc
     1381 cccgccaccg agggcggcgc cagttggggc gagctgatgg ccgacgaccg ccccggcatc
     1441 gaggaggtgt tgggtgagcg ccaggaactg atgtatcgcc gcgaactgct caagcacgcc
     1501 tggggcgaac tgaccgatcg cgagcgcgac atcgtcgccg agcgcaccct gcgcgacaag
     1561 ccgctgcgcc ttgaggatct ggcccagcgc tacaacatct cgcgcgagcg tgtccgccag
     1621 atcgaggccg ccgccatgct gaagctgaag ggcttggtcc gtgccgccga ggcccgcctg
     1681 atgcccaaga cccgcaccgc cacgtcgtga ccggaggata gccgatgcaa tgtcccgtct
     1741 gttccgtcga cctgttgatg agcgaacgcg ccggcgtcga gattgattat tgccccaaat
     1801 gccggggcgt gt
//
LOCUS       DATIKR010000150         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_14085, whole genome shotgun sequence.
ACCESSION   DATIKR010000150 DATIKR010000000
VERSION     DATIKR010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14085"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1509)
                     /locus_tag="VLL76_02250"
     CDS             complement(<1..1509)
                     /locus_tag="VLL76_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV28341.1"
                     /translation="MSKRLLVIEDNPGDQRLIEIKLAEAMVPWKADCRSTLADALALA
                     PFDQYECILADLGLPDASGLEAVVHLKEAGPDTALVVLTSLDDERVAQDAIRTGAQDY
                     VVKSLAGLELLPRVIRHAIERQQTRTALEMSHRTTEALLDASHDFAVLLDPSGRIITI
                     NAQAADFFGQPADALEGANLFSLLPEGLAAHRRDGILRAIETGKTVEFEDSDGLRWFA
                     NRMLVASGTRPGEHRCAYFCRDITSERAAAAKLAEAKEEADLANRAKTEFMARMSRDI
                     RTPLNDVIGFAEMISTEMLGAVQPGGYREYAESILNSGSQILKLIDRITDVSMLESAL
                     LRDQASYRDLVELSPDLICVCVDGVIERINAAGLGMLRAPSASACEGKLFADFIHPDY
                     RGILDMGLEALYEEDHPVPVKVVTFAGRNRDVELSAVALRRDGHTATLLVGRDTTEVT
                     AAMRAVAAREHRIRAIMDTVLDAIVTIDEDGIVVSANLSVERIFGYSLAELVG"
     gene            complement(1577..>2601)
                     /locus_tag="VLL76_02255"
     CDS             complement(1577..>2601)
                     /locus_tag="VLL76_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012700367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HSV28342.1"
                     /translation="AFVFGYLGGGPAPFAATDPASGFVLAFQALPLVLLMSALSALLY
                     HWRILSLVVKGFSRILERTLGIGGAVGVSSAANAFVGMVEAPLLIRPYIGFLSRGELF
                     VVMTGGMATIAGTVMVLYATFLQGVVPDPVGHLLTASLISVPAAIMVAKVMVPDDSRT
                     GGGKGGPPVAYAGAMDAVVRGTIDGVQLLINIVALLIVLVALVSLANAALSLLPEFGG
                     APVTLQRVLGLAMAPVAWLMGIPADEAATAGALMGTKTVLNELLAYLELSRLPPGALS
                     ERSRIIMTYALCGFANFGSLGIMIAGLAAMAPERRDEVVALGFRAIVSGTLASCLTAA
                     VVSTLI"
BASE COUNT          450 a          866 c          915 g          370 t
ORIGIN      
        1 gccgaccagc tcggccagcg aatagccgaa gatgcgctcg accgacaggt tggcgctgac
       61 cacgatgccg tcctcgtcga tggtgacgat ggcgtccagc acggtgtcca tgatggcgcg
      121 gatgcggtgt tcgcgggcgg cgaccgcgcg catggcggcg gtgacctcgg tggtgtcgcg
      181 gccgaccagc agggtggcgg tgtggccgtc gcggcgcaac gccaccgccg acagctcgac
      241 atcgcggttg cggccggcga aggtcaccac cttgaccggg accgggtggt cctcctcgta
      301 cagcgcctcc aggcccatgt cgaggatgcc gcgataatcg gggtggatga agtcggcgaa
      361 cagcttgcct tcgcaggccg aggccgacgg cgcccgcagc atgcccaggc cggcggcgtt
      421 gatgcgctcg atcacgccgt cgacgcagac gcagatcagg tcgggcgaca gctcgaccag
      481 atcgcgatag gacgcctggt cgcgcaacag cgccgattcc agcatcgaca cgtcggtgat
      541 gcggtcgatc agcttgagga tctgcgaacc ggaattgagg atgctttcgg cgtattcgcg
      601 atagccgccg ggctgcacgg cgcccagcat ctcggtcgag atcatctcgg cgaaaccgat
      661 gacgtcgttc agcggggtgc ggatgtcgcg gctcatgcgc gccatgaact cggtcttggc
      721 gcggttggcc aggtctgcct cttccttggc ctcggccagc ttggcggcgg cggcgcgctc
      781 cgaggtgatg tcgcggcaga aataggcgca gcgatgctcg cccggccggg tgcccgaggc
      841 caccagcatg cggttggcga accagcgcag gccgtcggaa tcctcgaact ccaccgtctt
      901 gccggtctcg atggcgcgca ggatgccgtc gcggcgatgg gccgccagcc cctcgggcag
      961 cagcgagaac aggttggcgc cttccagcgc gtcggccggc tggccgaaga aatccgccgc
     1021 ctgggcgttg atggtgatga tgcggcccga cgggtccagc agcaccgcga agtcgtggct
     1081 ggcgtccagc agcgcctcgg tggtgcggtg cgacatctcc agcgcggtgc gggtctgctg
     1141 gcgctcgatg gcgtggcgga tgacgcgcgg cagcaattcc aggccggcca gcgacttgac
     1201 cacgtaatcc tgggcgccgg tgcggatggc gtcttgggcc acgcgctcgt cgtccaggct
     1261 ggtcagcacc accagggcgg tgtcgggccc ggcttccttg aggtggacga ccgcctcgag
     1321 ccccgaggcg tcgggcaggc caaggtcggc caggatgcat tcgtattggt cgaacggcgc
     1381 caacgccagg gcgtcggcca gcgtcgagcg acagtcggcc ttccacggga ccatcgcttc
     1441 ggcaagcttg atctcgatca gccgctggtc gcccgggttg tcctcgatca cgagaagtcg
     1501 tttggacact gcgccggcgt tcataccgcg aagatgcagt atcgtgacca ggatgtaaac
     1561 gacggtggga ggaaaactat atcaaagtgc ttacgaccgc cgccgtaagg caactggcaa
     1621 gcgttcccga gacgatggcg cggaacccca gggcgacgac ctcgtcgcgg cgctcgggcg
     1681 ccatggcggc aaggcccgcg atcatgatgc ccagcgagcc gaaattggcg aacccgcaca
     1741 aggcataggt catgatgatg cgcgagcgtt ccgacaacgc gcccggcggc aggcgcgaca
     1801 attccagata ggccagcaat tcgttcagca ccgtcttggt gcccatcagg gcgccggccg
     1861 ttgccgcctc gtcggcgggg atgcccatca gccaggccac cggcgccatc gccagcccca
     1921 agacgcgctg caaggtcacc ggcgcgccgc cgaattcggg cagcagcgac agcgcggcgt
     1981 tggcgaggct gaccagggcc accagcacga tcagcaaggc gacgatgttg atcagcaact
     2041 gaacgccgtc gatggtgcca cgcaccaccg cgtccatcgc gccggcatag gccaccggcg
     2101 ggccgccctt gccgccgccg gtgcggctgt cgtcgggcac catcaccttg gccaccatga
     2161 tggccgccgg caccgagatc agcgaggcgg tcagcaggtg gcccaccggg tcgggcacca
     2221 cgccttgcag gaaggtggcg tacagcacca tcaccgtccc cgcgatggtc gccatgccgc
     2281 cggtcatcac cacgaacagc tcgccgcgcg acaggaaacc gatatagggc cggatcagca
     2341 gcggcgcctc gaccatgccg acgaaggcgt tggccgccga tgacacgccg accgcgccgc
     2401 cgatgcccag cgtgcgctcg aggatgcggg aaaagccctt caccaccagg ctgaggatgc
     2461 gccagtgata cagcagcgcc gacagcgcgc tcatcagcag caccagcggc agggcctgga
     2521 aggccagcac gaagcccgag gcagggtcgg tggcggcgaa cggcgccggg ccgccgccga
     2581 gatagccgaa cacgaaggcg g
//
LOCUS       DATIKR010000151         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_26476, whole genome shotgun sequence.
ACCESSION   DATIKR010000151 DATIKR010000000
VERSION     DATIKR010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26476"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..1033
                     /locus_tag="VLL76_02260"
     CDS             131..1033
                     /locus_tag="VLL76_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008384267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HSV28343.1"
                     /translation="MSDPKLTIGPVLFNWRPEKLRDFYFRIADEADVDTVHVGEVVCS
                     KRTPFFAPMIPDVIERLAGAGKQVVLSSLALIMSERELEQARELAAAEGVLVEANDVS
                     VASLLAGRDFVVGPMVNVYNEGTLAYLESLGAIRTCLPAELPAAVVGALAKAAKGEIE
                     VQAFGRLPLAISARCYHARSRNLAKDGCQYVCADDLDGMAVDTIDDEPFLAVNGTQTM
                     SYHYLDLLAELRPLAAMGVSRFRLWPQNVDMVAVARLYRDVLAGAADPAEAAGELADL
                     CPGAEFANGYVHGREGHLFVESDL"
     gene            1142..>2009
                     /locus_tag="VLL76_02265"
     CDS             1142..>2009
                     /locus_tag="VLL76_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28344.1"
                     /translation="MAPPGESTAVKKPDDPTVIWFEHKFFQSFEDLYFRLTDSGEAVA
                     VIKLASNDAVLSFDGIKREFMLPDDSADAQMLNKVAEGLMFVRGLRPGEKLPKEILTR
                     EASWEPTDRHRRIAHQRLTMQLVTWLTGNEHIFTSAEELMQVAEDPQVKKNINLAFAE
                     AAEALGLGRDRREEVVHYIESLAKELAYIEAERDIFAEIKKVDEKVQGFRRLYSSDRG
                     MIETTDQVARLSQRALKVFQDYFDQVDAQTGEILAMLKNIDNQVDYIREVRDELHRRL
                     IPWEDIIPIWKTV"
BASE COUNT          351 a          674 c          661 g          323 t
ORIGIN      
        1 ccgccgtggt gcaggcgttc cgcgccggcg tcgatgccgt gatggccggc aacccgctgc
       61 ccgacatcga cctcgaccgc atcaccgagg gcggccgtca gaccaccggc gcctacgaga
      121 aagcctggcg atgagcgatc cgaagctgac catcggcccc gtcctgttca actggcggcc
      181 cgagaaactg cgcgacttct atttccgcat cgccgacgag gccgacgtgg acaccgtcca
      241 tgtgggcgag gtggtgtgct cgaagcgcac gccgttcttc gcgcccatga tccccgacgt
      301 gatcgagcgc ttggccggcg ccggcaagca ggtggttctg tccagcctgg cgctgatcat
      361 gagcgagcgc gagttggagc aggcgcgcga gctggccgcc gccgaaggcg tgctggtcga
      421 ggccaacgac gtgtcggtgg cgtcgctgct ggccggccgc gacttcgtgg tcgggcccat
      481 ggtcaacgtc tacaacgaag gcaccctggc ctatctcgaa tccctgggcg ccatccgcac
      541 ctgcctgccg gccgagttgc cggccgccgt ggtgggcgcc ctggccaagg cggccaaggg
      601 cgagatcgag gttcaggcct tcggccgcct gccgctcgcc atctcggcgc gttgctacca
      661 cgcccgctcg cgcaacctcg ccaaggacgg ctgccagtac gtctgcgccg acgacctcga
      721 cggcatggcg gtggacacga tcgacgacga acccttcctg gccgtcaacg gcacccagac
      781 catgtcgtac cattatctcg acctgctggc cgagttgcgg ccgctggcgg ccatgggggt
      841 gtcgcgcttc cggctgtggc cgcagaacgt ggacatggtg gcggtggcgc gcctgtaccg
      901 cgacgtgctg gcgggcgccg ccgacccggc cgaggcagcc ggcgaactgg ccgatttgtg
      961 ccccggcgcc gagttcgcca acggctatgt ccacggtcgt gaaggccacc tgttcgtcga
     1021 aagcgacctc tagcgtcggc ggctcttgtc gggcacccga cacctcggca tactgtgcca
     1081 ccggccggtg ttggcgttag ggggaacgcc ggcaaggaca tgaacggtcg tggatgcgag
     1141 catggcaccg cctggggaaa gcaccgctgt caagaagccc gatgatccga cggtgatctg
     1201 gttcgaacac aagttcttcc agtcgttcga ggatctgtat ttccgcctga ccgattccgg
     1261 tgaggcggtc gccgtcatca agctggcgag caacgacgcc gtgctgtcgt tcgacggcat
     1321 caagcgcgaa ttcatgctgc ccgacgattc cgccgacgcc cagatgctga acaaggtggc
     1381 cgaaggcctg atgttcgtgc gcggcctgcg tccgggcgag aagctgccca aggagatcct
     1441 gacgcgcgag gcgtcgtggg aacccaccga ccgccaccgc cgcatcgccc accagcgtct
     1501 gaccatgcag ctggtcacct ggctgaccgg caacgagcac atcttcacct cggcggaaga
     1561 gctgatgcag gtcgccgagg acccgcaggt caagaagaac atcaacctcg ccttcgccga
     1621 ggccgccgag gccctgggcc tgggccgcga ccgccgcgaa gaggtggtgc actacatcga
     1681 gtcgctggcc aaggaattgg cctatatcga ggccgagcgc gacatcttcg ccgagatcaa
     1741 gaaggtggac gaaaaggtcc agggcttccg ccgcctctac agctcggatc gcggcatgat
     1801 cgagaccacc gaccaggtgg cccgcctgtc gcagcgcgcg ttgaaggtgt tccaggatta
     1861 cttcgaccag gtcgatgccc agaccggcga aatcctggcg atgctgaaga acatcgacaa
     1921 ccaggtcgac tatatccgcg aggtccgcga cgaactgcac cgccgcctga tcccgtggga
     1981 agacatcatt ccgatctgga aaaccgtct
//
LOCUS       DATIKR010000152         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_14088, whole genome shotgun sequence.
ACCESSION   DATIKR010000152 DATIKR010000000
VERSION     DATIKR010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14088"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..>1522
                     /locus_tag="VLL76_02270"
     CDS             23..>1522
                     /locus_tag="VLL76_02270"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSV28345.1"
                     /translation="MAVKESVARWIRYVPLAWRIPLVVVLNAVVALVVGLMGWQGAAV
                     VHADYEELRAVQSRSRVLADIDTQSSRLQSLIRQYLNNPTDDVLKEILRRSEELFGAL
                     AVTGGDEQAQDELTRLNDAARRFVAGFQQLKAINAEVARVYETHIVQSTSEMSGLYAI
                     LNSTARTRAGSLLAPALVKSHENFLEAVIAINTFYFNASPQSAETAQASLNRLIETVP
                     VMVDLAAGDLQRDALTVVGQRAQTLSKGVADVARAFEARARILSNEVDANQAIMAATI
                     DHLIAKGHDREDLLQRQSHQLLLRMGSVGATLGVALLLVGALASWSIGQSIRRPLLRL
                     RAVMEAGARGDWSRDIEDRDLPDELAAMARTVEVFKRDAIEKQRLEAEKIQAQARQEE
                     AKRLTLQNLLAQMEAYEYGGTFARPVAAQPETDAAEIAAVFNRVLAKFHEAVTARDSA
                     ISALTSAKEQAETANQAKSAFLAAMSHEIRTPMNGVIGMLELLSHTPLDG"
BASE COUNT          267 a          543 c          510 g          202 t
ORIGIN      
        1 gccgcatcca gggcaccgag tgatggcggt gaaggaaagc gtcgcgcgct ggatccgtta
       61 cgtgccgctg gcgtggcgca tcccgctggt ggtcgtgctg aacgccgtcg tggcgctggt
      121 ggtcggcctg atgggctggc agggcgccgc cgtcgtccac gccgattacg aggaattgcg
      181 cgcggtgcaa agccgcagcc gggtgctggc cgacatcgac acccagtcca gccgcctgca
      241 aagcctgatc cgccaatacc tcaacaatcc caccgacgac gtcctcaagg agatcctgcg
      301 ccgctccgag gaattgttcg gcgcgctggc ggtgaccggc ggcgacgagc aggcccagga
      361 cgagctgacc cggctcaacg acgcggcgcg ccgcttcgtc gccgggttcc agcaattgaa
      421 ggccatcaac gccgaggtgg cgcgcgtcta cgagacgcac atcgtccaga gcaccagcga
      481 gatgtcgggg ctgtacgcca tcctcaactc gaccgcccgc acccgcgccg gttcgctgct
      541 ggcgcccgcc ttggtgaagt cgcacgagaa cttcctggaa gccgtaatcg ccatcaacac
      601 cttctatttc aacgccagcc cccagagcgc cgagaccgcg caggccagcc tgaaccggct
      661 gatcgagacg gtgccggtga tggtcgacct ggccgccggc gacctgcagc gcgacgccct
      721 gaccgtggtc ggccagcggg cccagacgct gtcaaagggc gtcgccgacg tcgcccgggc
      781 attcgaagcc cgcgcccgca tcctcagcaa cgaggtggat gccaaccagg cgatcatggc
      841 cgccaccatc gaccatctga tcgccaaggg tcacgaccgc gaggatctgc tgcagcggca
      901 gtcgcaccaa ttgctgctgc gcatgggcag cgtcggggcc acgctgggcg tggcgctgct
      961 gctggtcggc gccctggcga gctggagcat cggccagtcc atccggcgcc ccctgctgcg
     1021 cctgcgcgcg gtcatggagg ccggcgcgcg cggcgactgg agccgcgaca tcgaggaccg
     1081 cgacctgccc gacgaactgg ccgccatggc ccgcacggtc gaggtgttca aacgcgacgc
     1141 catcgagaag cagcggctgg aggcggagaa gatccaggcc caggcgcggc aggaggaagc
     1201 caagcggctg accctgcaga acctgctggc ccagatggag gcctatgaat acggcggcac
     1261 cttcgcccgc cctgtcgccg cccagccgga aaccgacgcc gccgagatcg ccgccgtgtt
     1321 caaccgcgtg ctggccaagt tccacgaggc ggtgacggcg cgcgacagcg ccatcagcgc
     1381 gctgaccagc gccaaggagc aggccgagac cgccaaccag gccaagtccg ccttcctggc
     1441 cgccatgagc cacgagatcc gcacgcccat gaacggcgtc atcggcatgc tggagctgtt
     1501 gagccatacc ccgctcgacg gc
//
LOCUS       DATIKR010000153         3192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_14132, whole genome shotgun sequence.
ACCESSION   DATIKR010000153 DATIKR010000000
VERSION     DATIKR010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14132"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VLL76_02275"
     CDS             complement(<1..420)
                     /locus_tag="VLL76_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSV28346.1"
                     /translation="MLRDASNASALPLIGIYEISKVLGSTLDLDKALHDVLNILSSYL
                     HMRHGAVVLQHPESHELEIVAVAGMSLSLARSGALCYPFAAVQKVVSTGVPMVVPEAS
                     DEPLLAEYIAGNQSLDDESVSFFCVPIKTTGKPLGALS"
     gene            complement(558..812)
                     /locus_tag="VLL76_02280"
     CDS             complement(558..812)
                     /locus_tag="VLL76_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28347.1"
                     /translation="MDETRIVGDLPNMRIEVTRRAAPEGGAELMTINLTATPDFRTAM
                     PMLLQAPFALWQAMAAPWMALAQTNPFLRLPQPERDEDRK"
     gene            complement(931..1254)
                     /locus_tag="VLL76_02285"
     CDS             complement(931..1254)
                     /locus_tag="VLL76_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HSV28348.1"
                     /translation="MAMKDCIDACDTAHRACTEAAIHGMQQGGKLADWELIQLLLDCA
                     DITETAADFMLRSSRMHQSVCRVTAEICDKCADSCEQFAAHDLRMKQCAEACRRAATN
                     CRKLL"
     gene            complement(1377..2483)
                     /locus_tag="VLL76_02290"
     CDS             complement(1377..2483)
                     /locus_tag="VLL76_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HSV28349.1"
                     /translation="MKSIKTLAMAFATAAALGATAARADILIGVAGPMTGSEAQFGEQ
                     FRQGAEKAVADINAKGGVLGQQLKLVLGDDACDPKQARSVAEELSAKKVVFVAGHFCS
                     GSSIPASEVYLENAILQISPGSTNPTFTERGLPNVFRTCGRDDNQGKVAAEFVAAKLK
                     GKKIGVIHDKSAYGKGLADEFKKNLNAKGIQEVFYEAITAGEKDYSALVTKAKLAQVD
                     ILYLGGYKTEGGLIVRQMRDQGMKTALMGGDALVTEEYWAITGPAGEGTLMTFSPDPR
                     LLPQNAELVKYFRANNYEPEAYTLYTYATIQAWAKAAEKAKSTDLKKVAAVLKGGDKF
                     ETAVGTIGFDAKGDVVGPTYVMYVWKNGKYVYAD"
     gene            complement(2541..2879)
                     /locus_tag="VLL76_02295"
     CDS             complement(2541..2879)
                     /locus_tag="VLL76_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28350.1"
                     /translation="MIENIGVFIGITIVFMGGCAFMAGQALAATWRPLWQVFPYALGL
                     ALADRFVAFALFKGSLLSLPFYLTDAAVLVAIALGAYRMTQAKRMVDQYPWLYDRAGL
                     FGWREKGGHR"
     gene            complement(2876..>3192)
                     /locus_tag="VLL76_02300"
     CDS             complement(2876..>3192)
                     /locus_tag="VLL76_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003590544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV28351.1"
                     /translation="GGEQQMLAIGRALMSRPKVLLLDEPSLGLAPLVVRHIFELIKQI
                     NAEQKVTVFLVEQNAYAALKLAHRGYVMVNGRVTLSGSGAELLANKEIRAHYLEGGVV
                     EA"
BASE COUNT          520 a         1003 c         1077 g          592 t
ORIGIN      
        1 cgacagcgcc cccagcggct tgccggtggt cttgatgggg acgcagaaga acgacaccga
       61 ctcgtcgtcg agggattggt tgccggcgat gtattcggcc agcagcggct cgtccgaggc
      121 ctcgggcacc accatgggga cgccggtgga caccaccttc tggacggcgg cgaaggggta
      181 gcacagggcg cccgagcgtg ccagcgacag gctcatgccg gctaccgcga cgatctcgag
      241 ttcatggctt tcggggtgct gcagcacgac ggcgccgtgg cgcatgtgca ggtaggagga
      301 caggatgttg agcacgtcgt gcagcgcctt gtcgagatcg agggtgctgc ccagcacctt
      361 gctgatctcg tagatgccga tcagcggcaa ggcgctggca ttggaagcgt cacgcagcat
      421 gtttccatcc cgacccatgg caaacccatc cttccggcgt cgccgccagc gttgtgtcca
      481 cctcccccta gtgactaatt tttacgcatt ttacggcatt gcacaaatag tttccactgc
      541 tgcccgacaa agtctgctca ttttctgtct tcgtcccgct ctggttgcgg cagcctgagg
      601 aacggattgg tttgggccaa agccatccac ggcgccgcca tggcctgcca cagggcgaag
      661 ggggcctgca gcagcatggg catggccgtg cggaaatcgg gcgtggcggt caggttgatg
      721 gtcatcagct cggcgccgcc ctcgggggcg gcccggcggg tgacctcgat gcgcatgttg
      781 ggcaggtcgc cgacgatgcg ggtctcgtcc atgaggggtc ctttcacgcc attgctgtca
      841 tgctgagcgc aagcgaagca tctttcaccc ttgggcggca accgctctcg cgtgaaagat
      901 ccttcgccgg cggctcagga tgacatcgac ttacagcagc ttgcggcaat tggtggcggc
      961 gcggcggcag gcctcggcgc attgcttcat gcgcaggtcg tgggcggcga attgctcgca
     1021 cgaatcggcg catttgtcgc aaatctcggc ggtgacgcgg cacacgctct ggtgcatgcg
     1081 cgacgagcgc agcatgaaat cggcggcggt ctcggtgatg tcggcgcagt cgagcaggag
     1141 ctggatcagc tcccaatcgg ccagcttgcc gccctgctgc atgccgtgga tggcggcctc
     1201 ggtgcaggcg cggtgggcgg tgtcgcaggc gtcgatgcag tctttcatgg ccatgggcag
     1261 ggtcctccgt cgcggcttct cctgactgaa aaccctgatc ccaaagccct gttccgtcaa
     1321 cgcgaaaggc ccggcgcagg tgcgccgggc ctcaggcaaa agcaagggaa accttgtcaa
     1381 tccgcgtaaa cgtacttgcc gttcttccaa acgtacatga cgtaggtggg tccgacgacg
     1441 tcacccttgg cgtcgaagcc gatggtgccg acggcggtct cgaacttgtc gccgcccttg
     1501 agcacggcgg cgaccttctt gaggtcggtg ctcttggcct tttccgccgc cttggcccac
     1561 gcctggatgg tggcgtaggt atagagggta taggcctcgg gctcgtaatt gttggcgcgg
     1621 aaatacttca ccagctcggc attctgcggc agcaggcgcg gatcggggct gaaggtcatc
     1681 agggtgcctt cgccggccgg gccggtgatg gcccagtatt cctcggtcac cagggcgtcg
     1741 ccgcccatca gcgcggtctt catgccctgg tcgcgcatct ggcgcacgat caggccgccc
     1801 tcggtcttgt agccgccgag atacaggatg tcgacctggg ccagcttggc cttggtgacc
     1861 agcgccgaat aatccttttc gccggcggtg atggcctcgt agaagacctc ctggatgccc
     1921 ttggcgttga gattcttctt gaactcgtcg gccaggccct tgccataggc cgacttgtcg
     1981 tggatgacgc cgatcttctt gcccttcagc ttggcggcga cgaattcggc ggccaccttg
     2041 ccctggttgt cgtcgcggcc gcaggtgcgg aacacgttgg gcaggccgcg ttcggtgaag
     2101 gtcgggttgg tggagccggg cgagatctgg aggatggcgt tctccagata gacctcggag
     2161 gcggggatgg acgagccgga acagaagtga ccggcgacga acaccacctt cttggccgac
     2221 aattcctcgg cgaccgagcg ggcctgcttg ggatcgcagg cgtcgtcgcc cagcacgagc
     2281 ttgagctgct ggcccagcac gccgcccttg gcgttgatgt cggcgaccgc cttctcggcg
     2341 ccttggcgga actgctcgcc gaattgcgcc tccgagccgg tcatcgggcc ggcgacaccg
     2401 atcaggatgt cggcgcgggc ggcggtggcg cccaaagcgg cggccgtggc gaacgccatg
     2461 gccagagtct tgatgctctt catctccctc gatcctcctt gttaccccct gtggcggaca
     2521 ggggatggta acgcaacccg ctagcggtgc ccacccttct cgcgccagcc gaacaggccg
     2581 gcgcggtcgt acagccaggg atattgatcc accatgcgct tggcctgggt catgcggtac
     2641 gcgcccaggg cgatggcgac cagcacggcg gcgtcggtca ggtagaacgg cagcgacagc
     2701 aagctgccct tgaacagggc gaaggcgacg aagcggtcgg ccaaggcgag gcccagggcg
     2761 taggggaaca cctgccacag cggccgccag gtggcggcca gggcctgtcc ggccatgaag
     2821 gcgcaaccgc ccatgaagac gatggtgatg ccgatgaaga cgccgatgtt ctcgatcatg
     2881 cctcgacgac tccgccttcc aggtaatggg cgcggatctc cttgttggcc agcagctcgg
     2941 cgccgctgcc cgacagggtg acgcggccgt tgaccatgac atagccgcga tgggccagct
     3001 tcagcgccgc ataggcgttc tgctcgacca ggaagacggt gaccttctgc tcggcgttga
     3061 tctgcttgat cagctcgaag atgtggcgca ccaccagcgg cgccaggccc agcgacggct
     3121 cgtccagcag cagcaccttg ggccggctca tcagggcgcg gccgattgcc agcatctgct
     3181 gctcgccccc cg
//
LOCUS       DATIKR010000154         2580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_50619, whole genome shotgun sequence.
ACCESSION   DATIKR010000154 DATIKR010000000
VERSION     DATIKR010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50619"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..2521
                     /locus_tag="VLL76_02305"
     CDS             212..2521
                     /locus_tag="VLL76_02305"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005981062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HSV28352.1"
                     /translation="MTQVAAISQQIWDMKYRFKTADGTPVDKTIEESWRRVAQSLAQP
                     ESDPSWQERFYKAMEGFTFLPAGRILSGAGTDRRVTLFNCFVMGDIPDDMSGIFEQLR
                     EAALTMQQGGGIGYDFSTIRPKGAPVKGVGADASGPLSFMDVWDAMCKTIMSAGSRRG
                     AMMATMRCDHPDIEAFIDAKQEPGRLRMFNLSVLVTDSFMEAVKQDAAWELVFGGVVY
                     KSMPARQLWDKIMRATYAYAEPGVIFIDRINRLNNLHYCETIHATNPCGEQPLPPYGV
                     CLLGSVNLARLVVEPFTDGAHLDMDAFRQTVHVAVRMMDNVIDVSRYPLPAHENEAKS
                     KRRIGLGITGLADALILCGARYGGKEAIRLTEQWMAALRREAYLASVELAKEKGAFPL
                     YDRDKFLAGENVRSLDADVQAAIAQHGIRNALLTSIAPTGTISLFADNVSSGLEPVFS
                     FTYTRQVLQRDGTRREEEVSDYAYRLFHRIKGENAPLPSYFVDAQRLSPGDHVVMQAA
                     VQKYVDSSISKTINVPESIDFAAFRDVYEQAYELGCKGCTTYRPNDVTGSVLEVKKDT
                     KTDAEPQLPLEQPKALPEDHLEAGAVIHLTRPLDRPEALPGNTYKVRWHDSDHAMYIT
                     INDVIQDGRRRPFEVFINSKNMEHYAWTVALTRMISAVFRRGGDVAFVVEELKAVFDP
                     RGGQWAQGKYVPSLLAAIGEVIERHMIDIGFLPDPKAAREPAEARDDRKVVNMEGTRL
                     RHCPKCNQPALLRSEGCDTCTSCGYSKCG"
BASE COUNT          466 a          904 c          808 g          402 t
ORIGIN      
        1 gaatcgtcgc gactccccac cctgtggaaa actaggataa cggggggaac tcggggattc
       61 gccgccgcgt cgcgatatag gggatgacgg cggggtgccc gatccataga ctgccgcgct
      121 actctggcct gaaatcccag gatttcagcg gtttttaagg aatttgaggg tgtcgcgggc
      181 gcaggcgcgg gcacccccgg gaggacgagt gatgacgcag gtggccgcca tttcccagca
      241 gatctgggac atgaagtatc gcttcaagac cgccgacggc actcctgtgg acaagaccat
      301 cgaggaatcc tggcgccgcg tcgcacaatc cctggcccag cccgaatccg acccgtcgtg
      361 gcaagagcga ttctataagg cgatggaggg cttcaccttc ctgcccgccg gccgcatcct
      421 gtcgggcgcc ggcaccgacc gccgcgtcac cctgttcaac tgcttcgtca tgggcgacat
      481 ccccgacgac atgtcgggca tcttcgagca actgcgcgag gcggccctga ccatgcagca
      541 gggcggcggc atcggctacg acttctcgac catccggccc aagggcgccc cggtgaaggg
      601 cgtcggcgcc gacgcctcgg gtccgctgtc gttcatggac gtgtgggacg ccatgtgcaa
      661 gacgatcatg agcgccggct cgcgccgggg cgccatgatg gcgaccatgc gctgcgacca
      721 ccccgacatc gaggcgttca tcgacgccaa gcaggaaccc ggccgcctgc gcatgttcaa
      781 cctgtcggtc cttgtcaccg attccttcat ggaagcggtc aagcaggacg cggcgtggga
      841 actggtgttc ggcggcgtcg tctacaaatc catgccggcc cgccagttgt gggacaagat
      901 catgcgggcg acctatgcct atgccgagcc tggcgtgatc ttcatcgacc gcatcaaccg
      961 cctgaacaac ctgcattact gcgaaaccat ccacgccacc aacccgtgcg gtgaacagcc
     1021 gctgccgccc tatggcgtct gcctgctggg gtcggtcaac ctggcgcggc tggtggtcga
     1081 gccgttcacc gacggcgccc atctcgatat ggacgccttc cgccagaccg tgcacgtggc
     1141 cgtgcgcatg atggacaacg tcatcgacgt gtcgcgctat ccgctgccgg cgcacgagaa
     1201 cgaggccaag tccaagcgcc gcatcggcct gggcatcacc ggcctggccg acgccctgat
     1261 cctgtgcggc gcccgctatg gcggcaagga ggcgatccgc ctgaccgagc aatggatggc
     1321 ggcgttgcgg cgcgaggcct atctggcctc ggtcgagctg gccaaggaaa agggcgcctt
     1381 cccgctctac gacagggaca agttcctggc cggcgagaac gtccgctcgc tcgatgccga
     1441 cgtccaggcc gccatcgccc aacacggcat ccgcaacgcg ctgctgacct cgatcgcgcc
     1501 caccggcacc atctcgctgt tcgccgacaa cgtgtcgtcg ggcctggagc cggtgttcag
     1561 cttcacctac acccgccagg tgctgcagcg cgacggtacc cgccgcgagg aagaggtcag
     1621 cgactacgcc tatcgcctgt tccaccgcat caagggcgag aacgcgccgc tgccgtccta
     1681 tttcgtcgat gcccagcgcc tgagccccgg cgaccacgtg gtgatgcagg ccgccgtcca
     1741 gaaatacgtg gattcgtcca tctcgaagac catcaacgtc ccggaaagca tcgatttcgc
     1801 cgccttccgc gacgtctacg agcaggccta tgaactgggc tgcaagggct gcaccaccta
     1861 tcgccccaac gacgtcaccg gctcggtgct ggaggtcaag aaggacacca agacggacgc
     1921 cgagccgcaa ctgccgctgg aacagcccaa ggcgctgccc gaggaccatc tggaggccgg
     1981 cgccgtcatc cacctgaccc gcccactcga ccgccccgag gcgctgccag gcaacaccta
     2041 caaggtgcgc tggcacgatt ccgaccacgc catgtacatc accatcaacg acgtcatcca
     2101 ggacggccgc cgccggccct tcgaggtgtt catcaactcg aagaacatgg agcattacgc
     2161 ctggacggtg gcgctgaccc gcatgatctc ggcggtgttc cgccgcggcg gcgacgtcgc
     2221 tttcgtggtc gaggagctca aggcggtgtt cgacccgcgc ggcggccaat gggcgcaggg
     2281 caagtacgtc ccgtcgctgc tggccgccat cggcgaggtg atcgagcgcc acatgatcga
     2341 catcggcttc ctgcccgacc ccaaggccgc ccgcgaaccg gccgaggccc gcgatgaccg
     2401 caaggtcgtc aacatggaag gcacccgcct gcgccactgc cccaaatgca accagccggc
     2461 cctgctgcgc tcggaaggct gcgacacctg caccagctgc ggatattcga agtgcgggtg
     2521 acgcgctaag gcgcgtccgc cgtcacccga cgcggcggcc gctccgcggc ccgatcggcg
//
LOCUS       DATIKR010000155         1861 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_63223, whole genome shotgun sequence.
ACCESSION   DATIKR010000155 DATIKR010000000
VERSION     DATIKR010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63223"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VLL76_02310"
     CDS             complement(<1..559)
                     /locus_tag="VLL76_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="theronine dehydrogenase"
                     /protein_id="HSV28353.1"
                     /translation="MKQVIQSARTGKLALKDVPDPRVRSGAILVRTRASLISAGTERM
                     VIDFAKKSLAGKAKERPDLVRKVLDKAKRDGLVSTFKAVMARLDEPMPLGYSAAGEVV
                     AVGAGCEGAFRVGQRVALAGAGLANHAELNVVPRNLAVPVPDDVSFEEACFGTLGAIA
                     MAGVRNTHVQLGDVVTVLGVGLVGQM"
     gene            681..1667
                     /gene="galE"
                     /locus_tag="VLL76_02315"
     CDS             681..1667
                     /gene="galE"
                     /locus_tag="VLL76_02315"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HSV28354.1"
                     /translation="MSGDAILVTGGAGYVGSHVCKALARAGWRPVVYDNLSHGHDWAV
                     KWGPLERGDLADTDRLAEVMTRHGVKAVAHLAGLIAVGESVREPLLYWRNNVSGSESL
                     LSAMARTGVRHLVFSSTCAVYGEPERQPLDESFVTRPVSPYAWTKLAVERMLADCDTA
                     FGLKSVCLRYFNAAGADPEGEIGEAHDPETHLIPLVLEAAAGLRDGIEMFGDDYPTPD
                     GTCVRDYVHVADIAQAHLLALDHLLAGKGSLTLNLGSGHGFSVREVIEVARKVTGRHI
                     PVRQAGRRAGDPPVLVGDARRAQSVLGWQPRFPDLQDQVAHAWAWLKARKGL"
     gene            1671..>1861
                     /locus_tag="VLL76_02320"
     CDS             1671..>1861
                     /locus_tag="VLL76_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HSV28355.1"
                     /translation="MCGLTAFLARQGTAPVDGDELVRVRDAMMARGPDGHGLWLSADG
                     HVGLAHRRLAILDLSPAGA"
BASE COUNT          265 a          670 c          647 g          279 t
ORIGIN      
        1 ccatctggcc gaccaggccc acccccagca cggtgacgac gtcgcccagc tgcacatggg
       61 tgttgcgcac gccggccatg gcgatggcgc ccagggtgcc gaagcaggct tcctcgaacg
      121 acacgtcgtc gggcaccggc accgccaggt tgcgcggcac cacgttgagt tcggcatggt
      181 tggcgaggcc ggctccggcc agggcgacgc gctggccgac gcggaaggcg ccctcgcagc
      241 cagcgcccac cgccaccacc tcgccggcgg cggaatagcc cagcggcatc ggctcgtcga
      301 gccgcgccat caccgccttg aaggtcgaga ccaggccgtc gcgcttggcc ttgtcgagca
      361 ccttgcgcac caggtcgggg cgctccttgg ccttgccggc caggcttttc ttggcgaagt
      421 cgatgaccat gcgctcggtg ccggcgctga tcagcgacgc gcgggtgcgc accaggattg
      481 cgcccgagcg cacgcgcggg tcggggacgt ccttcaaagc cagtttgccg gtgcgggcgc
      541 tctgtatgac ctgcttcatg cctgctcagc tcatgcggtg gagaccaaag caaatacacc
      601 cttcgccccc ttatcgccag cccgggcttg acctttggcc gatgcttatt gtcacatgca
      661 cgccagtcac gaggggtttc atgagcggcg acgcgatcct ggtcaccggc ggcgccggct
      721 atgtgggcag ccacgtctgc aaggcgctgg cgcgcgccgg gtggcgcccg gtggtctacg
      781 acaatctgag ccacggccac gactgggcgg tcaaatgggg gccgctggag cgcggcgacc
      841 tggccgacac cgaccgcctg gccgaggtga tgacgcgcca cggggtgaag gccgtggcgc
      901 atctggccgg gctgatcgcg gtgggcgagt cggtgcgcga gccgctgctg tactggcgca
      961 acaacgtctc gggcagtgaa agcctgttgt ccgccatggc gcggaccggc gtgcgccacc
     1021 tggtgttttc cagcacctgc gccgtctatg gcgaacccga gcgccagccg ctggacgaaa
     1081 gcttcgtcac ccggccggtc agcccctatg cctggaccaa gctggcggtg gaacgcatgc
     1141 tggccgattg cgacacggct ttcgggctga aatccgtctg cctgcgctat ttcaacgccg
     1201 ccggcgccga tcccgaaggc gagatcggcg aggcccacga ccccgagacc catctgatcc
     1261 cgctggtgct ggaggccgcc gccggcctgc gcgacggcat cgaaatgttc ggcgacgact
     1321 atccgacgcc cgacggcacc tgcgtgcgcg actacgtcca cgtcgccgac atcgcccagg
     1381 cccacctgct ggcgctggac catctgttgg cgggcaaggg cagcctgacg ctcaatctcg
     1441 gcagcggcca cggcttttcc gtgcgcgagg tgatcgaggt cgcccgcaag gtgaccggcc
     1501 gccatatccc ggtgcgccag gccggccgcc gcgccggcga cccgccggtg ctggtgggcg
     1561 acgcccgccg cgcccaatcg gtgctgggct ggcagccgcg tttccccgac ctgcaggacc
     1621 aggtcgccca tgcctgggca tggctcaagg cgcgaaaggg gctctgacgc atgtgcgggc
     1681 tgaccgcctt cctggcgcgc cagggcaccg cccccgtcga cggcgacgag ctggtacggg
     1741 tgcgcgacgc catgatggcg cgcgggccgg acggccacgg cctgtggctg tcggccgacg
     1801 gccacgtcgg gctggcccac cgccgcctcg ccatcctgga cctgtcgcct gccggcgccc
     1861 a
//
LOCUS       DATIKR010000156         3346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_171847, whole genome shotgun sequence.
ACCESSION   DATIKR010000156 DATIKR010000000
VERSION     DATIKR010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171847"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VLL76_02325"
     CDS             <1..559
                     /locus_tag="VLL76_02325"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV28356.1"
                     /translation="QGDRVKGAYSLRTGLVALERVNEAGELVVLKLLQGGAFFPCADL
                     FAGGLHGASARAMAPSSACFVPADRLTALMTANAGLGFEIAKRGCEEARENEDIIFRL
                     CSGDLAERVLGMLESLGREAGDPAADGTLTFVLPISWRDLAGMVGTSPEVMSRLLRKM
                     TDAGRLTVEGRTVTLSAPEGERAFG"
     gene            complement(599..1594)
                     /locus_tag="VLL76_02330"
     CDS             complement(599..1594)
                     /locus_tag="VLL76_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HSV28357.1"
                     /translation="MALKSVALSLAVILAASVGVANAAEPIQPIAAAKPKDPALVELG
                     KKLYFDTRLSKSGFISCNSCHNLSMGGTDNLKTSIGHNWAKGPINAPTVLNSSMNLAQ
                     FWDGRAADLKAQAGGPIANPGEMAFTHELAVDVLQSIPGYVAEFKTVYGSDKVTIDGV
                     TKAIAAFEETLVTPNSRFDKWLKGDKKALSADELAGYGLFKDSGCTACHNGPAVGGNS
                     FQKMGVVAPYNATSPAEGRVAVTKDEADRFNFKVPTLRNVELTYPYFHDGEAATLTQA
                     VDTMGRIQLGKSFTPEENAKIVAFLKTLTGDQPAFKLPILPPSSDKTPRPTPFEK"
     gene            complement(1822..2262)
                     /gene="arsN2"
                     /locus_tag="VLL76_02335"
     CDS             complement(1822..2262)
                     /gene="arsN2"
                     /locus_tag="VLL76_02335"
                     /inference="COORDINATES: protein motif:HMM:NF040501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic resistance N-acetyltransferase ArsN2"
                     /protein_id="HSV28358.1"
                     /translation="MDVAEILPASCPELADALAGAGLPVDDLDESGRRFFRFLDDGGA
                     LVGFIGWELAGEAVLLRSLVVVPAMRGCGFSRRMMQWTLARLAEAGFAEAYLLTTSIA
                     DLAGRMGFVAVDRAQVPQGIKASRQFTTLCPSSAVVMRRATRSP"
     gene            complement(2262..>3346)
                     /gene="ccoG"
                     /locus_tag="VLL76_02340"
     CDS             complement(2262..>3346)
                     /gene="ccoG"
                     /locus_tag="VLL76_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HSV28359.1"
                     /translation="VYTDLFIWIESKIVGDRAQRMALDHAPWSAGKLAKVAAVNLSWA
                     AVAAACGMGFTLWFGDAFQMVRDIFTGQESAYTYVFILVIGGFCFLLAGYARERVCVY
                     MCPYSRFQAAMFDEHSLIVSYEAWRGEPRGAHKAGESFEGRGHCVDCRMCVTSCPTGV
                     DIRFGNQLACIGCGLCIDACDAIMDKHGLPHGLISYDSSTNLEAREQGRTPGGFKVIR
                     LRTVIYGALMAVIGTVMLVSLLTRSTVEINVIHERAPVFVQMSDGSIRNGYVYKVLNM
                     VREPRTFTLKTEGIAGATIDVVGGGAGAAEVELTVEPDAVGVFRLYVTAPAASAPGAK
                     NGLTFVLSEKDGTTERNSTLFAAPGN"
BASE COUNT          575 a         1097 c         1121 g          553 t
ORIGIN      
        1 ccagggcgac cgggtcaagg gcgcctattc cctgcgcacc ggcctggtgg cgctggagcg
       61 cgtcaacgag gccggggagt tggtggtgct gaagctgctg cagggcggcg cgttctttcc
      121 ctgcgccgat ctgttcgccg gcgggctgca cggcgccagc gcgcgggcca tggccccgag
      181 ttcggcctgc ttcgtgcccg ccgatcggct gaccgcgctg atgaccgcca acgccggcct
      241 gggcttcgag atcgccaagc gcggctgcga agaggcgcgc gagaacgagg acatcatctt
      301 ccgcctgtgc tccggcgacc tggccgagcg ggtgctgggg atgctggaat cgctgggtcg
      361 cgaggccggc gacccggccg ccgacggcac gctcaccttc gtcctgccca tcagctggcg
      421 cgaccttgcc ggcatggtgg gaaccagccc cgaggtgatg tcgcgcctgt tgcgcaagat
      481 gaccgacgcc ggccgcctga ccgtcgaggg ccggacagtg accctgtccg cccccgaggg
      541 cgagcgggca ttcgggtaaa agggaccggc cggcaaagac cggccggtcc cggttcgctt
      601 acttctcgaa cggcgtcgga cgcggagtct tgtccgacga cggcggcagg atcggcagct
      661 tgaaggccgg ctgatcaccg gtcagcgtct tcaggaaggc gacgatcttg gcgttctcct
      721 cgggcgtgaa gctcttgccc aactggatgc ggcccatggt gtcgaccgcc tgggtcaggg
      781 tcgccgcctc gccgtcatgg aagtagggat aggtgagttc gacgttgcgc agggtcggga
      841 ccttgaagtt gaagcggtcg gcttcgtcct tggtcaccgc gacccggcct tccgccgggc
      901 tggtggcgtt gtagggcgcg accacgccca tcttctggaa cgagttgccg cccaccgccg
      961 ggccgttgtg acaggcggtg cagcccgagt ccttgaacag gccgtagccc gccagttcgt
     1021 cggcggacaa cgccttcttg tcgcccttca gccacttgtc gaagcgggaa ttcggggtga
     1081 ccagggtctc ctcgaaggcg gcgatcgcct tggtgacgcc gtcgatggtg accttgtccg
     1141 aaccgtacac cgtcttgaat tcggcgacgt agccggggat cgactgcagc acgtcgaccg
     1201 ccaattcgtg ggtgaaggcc atttcgccgg gattggcgat ggggccgccg gcctgggcct
     1261 tgaggtcggc cgcacgacca tcccagaact gcgccaggtt catgctggaa ttcagcacgg
     1321 tcggggcgtt gatgggaccc ttggcccaat tgtggccgat cgaggttttc aggttgtcgg
     1381 tgccgcccat cgacaggttg tggcacgaat tgcacgagat gaagcccgac ttggacaggc
     1441 gggtgtcgaa gtacaatttc ttgcccagtt cgaccaaggc ggggtccttg ggcttggccg
     1501 ccgcgatcgg ctggatcggt tcagcggcgt tggccacacc gacggatgcg gccaggatga
     1561 cggccaggga aagcgcaaca gacttcaaag ccatgggaaa tccccctctc tgtacgaggt
     1621 tccactgaac ggtcagtggc ggacgcgctt ccctcggccc ccatatcccc tacccatgcg
     1681 ggccgcgacg aatacccgtc ctagtagtta tttccacaca cttcggcggg ccaccgcatt
     1741 gcgatggatc aaaagttgta agatttctaa gctggagggt gacaatgatg ccgactcaag
     1801 cttgaaaggg cgatggctgt gttagggcga tcgggtcgcg cggcgcatca ccaccgccga
     1861 ggacggacat agggtggtga attgccggct cgccttgatc ccttgcggca cctgggcacg
     1921 gtccacggcc acgaacccca tgcgaccggc caagtcggcg atcgaagtcg tcagcagata
     1981 agcctcggca aagccggcct cggccagccg tgcgagcgtc cattgcatca tccgccggct
     2041 gaagccgcac cctcgcatgg ccggcaccac caccagcgac cgcaacagca ccgcctcccc
     2101 cgccaactcc cagccgatga agccgaccag cgccccgcca tcgtcaagaa agcggaagaa
     2161 acggcgaccg gactcgtcga gatcatccac cggcaacccc gccccggcca gcgcatcggc
     2221 cagctcgggg caggacgcag gaaggatttc ggcgacgtcc atcaattccc cggcgcggcg
     2281 aacagggtgc tgttgcgctc ggtcgtcccg tccttttctg acagcacgaa ggtcaggcca
     2341 ttcttggcac ccggcgcgct ggcggccggc gcggtgacat acaggcggaa cacgcccacc
     2401 gcgtcgggct cgaccgtcaa ttccacctcg gccgcgccgg cgccgccgcc gaccacgtcg
     2461 atggtggcgc ccgcgatacc ctcggtcttc aaggtaaagg tgcgcggctc gcggaccatg
     2521 ttcagcacct tgtagacata accgttgcgg atgctgccgt ccgacatctg cacgaacacc
     2581 ggcgcgcgtt cgtggatgac gttgatttcg accgtcgagc gggtcagcag cgacaccagc
     2641 atgaccgtgc caatgaccgc catcaacgcg ccgtagatga ccgtgcgcag gcggatgacc
     2701 ttgaacccgc cgggggtgcg gccctgctcg cgcgcttcca gattggtgct ggaatcatac
     2761 gagatcagac cgtgcggcag gccgtgcttg tccatgatgg cgtcgcaggc gtcgatgcac
     2821 aggccgcagc cgatgcaggc caactggttg ccgaagcgga tgtcgacgcc ggtggggcac
     2881 gaggtgacgc acatgcggca atcgacgcaa tggccgcgcc cttcgaagct ttcgcccgcc
     2941 ttgtgggcgc cgcgcggctc gccacgccac gcctcgtagg acacgatcag cgaatgctcg
     3001 tcgaacatgg cggcctggaa gcgcgaatac gggcacatgt agacgcacac gcgttcgcgg
     3061 gcatagccgg ccagcaggaa gcagaagccg ccgatgacca ggatgaagac gtaggtatag
     3121 gcgctttcct ggccggtgaa gatgtcgcgc accatctgga acgcgtcgcc gaaccacagc
     3181 gtgaagccca tgccgcaggc cgccgccacc gccgcccacg acaggttgac ggcggcgacc
     3241 ttggccagct tgccggccga ccacggcgcg tggtcgagcg ccatgcgctg ggcgcggtcg
     3301 ccgacgatct tgctttcgat ccagatgaac aggtcggtgt agaccg
//
LOCUS       DATIKR010000157         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_147895, whole genome shotgun sequence.
ACCESSION   DATIKR010000157 DATIKR010000000
VERSION     DATIKR010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147895"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1334
                     /locus_tag="VLL76_02345"
     CDS             120..1334
                     /locus_tag="VLL76_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HSV28360.1"
                     /translation="MLQGKVLVAQGGGPTAVINQSMAGVVLEARKFRNVDLVYGAYHG
                     VRGIVNEDFLDLTQETSHNLEMVAETPSSALGSTRDKPDLKYCQEIFKVLKAHGIAYF
                     FYIGGNDSSDTVRIVSEEARKAGYPLRCIHIPKTIDNDLVHNDHTPGFPSAARFVAQA
                     FSGANLDNAALPGVYCAVVMGRHAGFLTAASALGKKFPDDGPHLIYLPERTFKVDKFL
                     GDVKATMDKYGRCVIAVSEGIHDETGAPIITKLASEVEKDAHGNVQLSGTGALADLLC
                     EEIKAKLGIKRVRGDTFGYLQRSFIGCVSDVDQREAREVGEKAVQFAMWGDQDGSVVI
                     KRTGFYSVDYQLMPLEAVAGKTRVMEDEFITQCGTDVTDAFRMYLRPLLGSRMPDAYR
                     LRLNKVPKILKA"
     gene            complement(1512..>2056)
                     /locus_tag="VLL76_02350"
     CDS             complement(1512..>2056)
                     /locus_tag="VLL76_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HSV28361.1"
                     /translation="PAVVRFGGIAVEPPPGGFLQPTKGGELAIAEAVLGAVGDAATVA
                     DLYSGCGSFTFPLAARGAVVHAVEGEEAPIRALEASAHGLKVTAEVRDLARRPLLAHE
                     LKKFQAVVFDPPRAGAQAQAEQLAEAGPKLVVAVSCNPATMARDLKILVDAGYRVEAI
                     TPIDQFPYAAHLEAVAVLRR"
BASE COUNT          364 a          700 c          676 g          316 t
ORIGIN      
        1 tccccccaga tggtccctac tcaggagtcg gacaaccccc gacagcccct ggttgctgcg
       61 ccgcgaaatg ccctatgctc tgactcggcc ttaaaaaaac aaggtggagg agggagaaca
      121 tgctgcaagg caaggtgctg gtggcgcagg gcggtggccc gaccgcggtg atcaaccagt
      181 cgatggcggg tgtggttctg gaagcccgca aattccgcaa tgtggacctg gtctacggcg
      241 cgtaccacgg ggtgcgcggc atcgtgaacg aggatttcct cgacctcacg caagagacca
      301 gccacaacct tgaaatggtc gccgagaccc cgtcctcggc cctgggctcg acccgcgaca
      361 agccggacct gaaatactgc caggagatct tcaaggtcct gaaggcccac ggcatcgctt
      421 atttcttcta catcggcggc aacgattcct cggacaccgt gcgcatcgtg tcggaagagg
      481 cgcgcaaggc cggctatccg ctacgctgca tccacatccc caagaccatc gacaacgacc
      541 tggtccacaa cgaccacacc cccggcttcc cgtcggcggc gcgcttcgtg gcccaggcgt
      601 tctcgggcgc caacctggac aacgcggcgc tgccgggcgt ctattgcgcc gtggtgatgg
      661 gccgccacgc cggcttcttg accgccgcct cggcgctggg caagaaattc cccgacgacg
      721 gcccgcatct gatctacctg cccgagcgca ccttcaaggt cgacaagttc ctgggcgacg
      781 tgaaggcgac catggacaag tacggccgtt gcgtcatcgc ggtgtcggaa ggcatccacg
      841 acgagaccgg cgcccccatc atcaccaagc tggccagcga ggtggagaag gacgcccacg
      901 gcaacgtcca attgtcgggc accggcgccc ttgccgacct gctgtgcgag gagatcaagg
      961 ccaagctggg catcaagcgg gtgcgcggcg acaccttcgg ctacctgcag cgctcgttca
     1021 tcggctgcgt ctcggacgtc gaccagcgcg aggcccgcga ggtcggcgaa aaggcggtgc
     1081 aattcgccat gtggggcgac caggatggct cggtggtgat caagcgcacc ggcttctatt
     1141 cggtggatta ccagttgatg ccgctggagg ccgtcgccgg caagacccgc gtgatggagg
     1201 acgaattcat cacccagtgc ggcaccgacg tcaccgacgc cttccgcatg tatctgcgcc
     1261 cgctgctggg cagccgcatg cccgacgcct accggctgcg cctcaacaag gtgccgaaga
     1321 tcctgaaggc gtaactaagg cgccctgtcg cccacaaccc cgtcatcccc gcgaaggcgg
     1381 ggatccatgt gggggcgggc gcaaagcctg accactcgat atggagtggt cgatgcatgg
     1441 attcccgctt tcgcgggaat gacgggactt attaacggcg caattggccc cctcgccagc
     1501 gagggggccg tctaccgccg cagcaccgcc accgcttcca ggtgggcggc gtaggggaat
     1561 tggtcgatgg gggtgatggc ttcgacgcga tagccggcat ccaccaggat cttgaggtcg
     1621 cgggccatgg tcgcgggatt gcacgacacc gccaccacca gcttcggccc ggcctcggcc
     1681 agttgctcgg cctgggcctg ggcgccggcg cgcggtgggt cgaacaccac ggcctggaac
     1741 ttcttcagct cgtgggccag aagcggccgg cgcgccaggt cgcgcacctc ggcggtgacc
     1801 ttgaggccgt gggcggatgc ctccagcgcc cggatcggcg cctcctcgcc ctcgaccgcg
     1861 tgcaccacgg cgccgcgcgc cgccagcggg aaggtgaagc tgccgcagcc ggaatagagg
     1921 tcggccacgg tggccgcgtc gcccaccgcc cccagcaccg cctcggcaat ggccagttcg
     1981 ccgcccttgg tgggctggag gaagcctccc ggcggcggct cgacggcgat gccaccgaag
     2041 cggaccacgg cgggat
//
LOCUS       DATIKR010000158         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_135550, whole genome shotgun sequence.
ACCESSION   DATIKR010000158 DATIKR010000000
VERSION     DATIKR010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135550"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VLL76_02355"
     CDS             complement(<1..1022)
                     /locus_tag="VLL76_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28362.1"
                     /translation="MAKKSAATDAAIQDVLLETTDNRGIALKVDRERGVIPGVKLLGA
                     MSARGREYPREVMTKAMPLYEGRPVNVDHVDPGGRRSYRDRIGAIKNVTLKEDGLYGD
                     FHYNPKHALAEQLAWDAENAPQNVGFSHDARGPSKLKGGRVVVESIDRVISVDLVANP
                     ATTQGLFEDRLHEGEIADKLDAATDGTTTPTTSMEESEMEWKDIDLDGLKKNRPDLAT
                     ALQESLDGQSELKRLQEELTALKAEKAAHELQESIAGELKAAKLDPANAKHVSPAFLA
                     ALTAVDVAGRKALIEDRAEIVLRAAPPTDGGLGPKTAPPLQEGDGKGLSPLPPTATPF
                     DKIRSWG"
     gene            complement(1107..1361)
                     /locus_tag="VLL76_02360"
     CDS             complement(1107..1361)
                     /locus_tag="VLL76_02360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28363.1"
                     /translation="MPKPDPLTGQKENAIKSGARYEPRQSQTEHNNAFRRTAHERLDQ
                     QIDIMEHREEYGTVGVSVTFERGEIRQVRRTLDGTDRPAR"
     gene            complement(1390..>2006)
                     /locus_tag="VLL76_02365"
     CDS             complement(1390..>2006)
                     /locus_tag="VLL76_02365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28364.1"
                     /translation="TEATRVASTASNQAVENSVGDMLAGKEYMAVMDQFTRPDHAARH
                     GKFYRRQGPNRYVADDGEIFPGDHWTYHCRCIGLDVFKAPEEFRQDPALAADFRREGV
                     DNIPDPPAYQDWFAAAGQAERKRAVGVRRLRAVEALLGSDRRPQWADFIEQTGRLLSP
                     QELAAETPAAKAARLAAVDAMLAERKRLFAAVVGSTFFEPAGAS"
BASE COUNT          280 a          638 c          673 g          415 t
ORIGIN      
        1 ccccaggaac gaatcttgtc gaacggcgtg gcggtcggcg gcagcggaga cagtcccttg
       61 ccgtcacctt cttgcagcgg cggggcggtt ttcggcccca gaccgccgtc ggtgggcggt
      121 gccgcacgga gaacgatttc ggcccggtcc tcgatcaggg ccttgcggcc ggcgacgtcg
      181 accgccgtca gcgcggccaa aaaggccggg ctgacgtgct tggcgttggc cgggtcgagc
      241 ttggcggcct tcagttcgcc ggcgatcgac tcttgcagct cgtgggctgc cttctcggcc
      301 ttcagagcgg tcagttcctc ctggagccgc ttgagttcgc tctggccgtc gagcgactcc
      361 tgcaaggccg tggccaggtc ggggcgattc ttcttgaggc cgtccaggtc gatgtctttc
      421 cactccattt cggattcctc cattgaggtt gtcggcgttg tggtgccgtc tgtggcggcg
      481 tcgagcttgt cggcgatctc gccctcgtgc agacgatcct cgaacagccc ctgggtggtt
      541 gccgggttgg cgacaagatc gacggaaatc acgcggtcga tcgactcgac gacgacccgc
      601 ccgcccttga gcttcgaagg tccgcgggcg tcgtgggaaa agcccacgtt ttgcggggcg
      661 ttttcggcgt cccaggcaag ctgctcggcc aaggcgtgct tcgggttgta gtggaagtcg
      721 ccgtaaaggc catcttcttt gagcgtgacg tttttgatcg cgccaatgcg gtcgcggtag
      781 ctgcggcgcc cgcccgggtc gacgtgatcg acgttgaccg gccgcccctc gtagagcggc
      841 atggccttgg tcatcacttc ccgcggatat tcgcggccac gggcggacat cgcaccgagc
      901 agcttgacgc cggggataac gccgcgctcg cgatcgacct tgagggcgat tccgcgattg
      961 tccgtcgtct ccaggagcac gtcctgaatc gcggcgtcgg ttgcggcgga tttcttggcc
     1021 atctgtttcc aaacaaaaag gggccgcagg ctctcccgtc gagaacctgc ggccccgctt
     1081 gccgatcggt agccgttgcc ttatgcctat cgcgccgggc ggtccgtgcc gtcaagggtc
     1141 cgtcgcacct ggcgaatctc tccgcgctcg aatgtcacgc ttacgccgac cgtgccgtat
     1201 tcttcgcggt gctccatgat gtcgatctgc tggtcgagtc gttcatgggc cgtgcgacga
     1261 aaggcattgt tgtgctcggt ctggctttgg cgtggctcgt agcgtgcgcc tgacttaatg
     1321 gcgttttctt tttgtcctgt caaggggtct ggtttcggca tggcgaaaaa atttctcctt
     1381 ggtgatgcgt taggatgccc cggccggctc gaagaacgtc gagccgacaa ccgcggcaaa
     1441 aagccgtttc cgctcggcga gcatcgcatc gacggcggcc agccgggcgg ccttcgccgc
     1501 gggcgtctcg gcggcaagtt cttgcggcga caagagccgc ccggtctgtt cgatgaaatc
     1561 ggcccattgg ggccgccggt cactgccgag cagtgcctcg accgcgcgaa gcctccggac
     1621 gccgactgcc cgctttcgct ccgcctggcc ggcggcggca aaccagtcct ggtaggccgg
     1681 cgggtcgggg atgttgtcca cgccctcgcg ccggaagtcg gcggccaacg ccgggtcttg
     1741 cctgaactcc tccggcgcct tgaacacgtc caggccgatg cagcgacagt ggtaggtcca
     1801 atgatcgccc ggaaaaatct cgccgtcgtc ggcgacgtaa cgattcggcc cctgccggcg
     1861 atagaacttg ccgtggcgtg cggcatggtc ggggcgggtg aattggtcca taacggccat
     1921 gtactccttg ccggccagca tgtcgccgac gctgttttcc acggcctggt tcgatgccgt
     1981 ggaggccacg cgggtcgcct cggtac
//
LOCUS       DATIKR010000159         1967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_14185, whole genome shotgun sequence.
ACCESSION   DATIKR010000159 DATIKR010000000
VERSION     DATIKR010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14185"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /gene="purN"
                     /locus_tag="VLL76_02370"
     CDS             complement(<1..391)
                     /gene="purN"
                     /locus_tag="VLL76_02370"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HSV28365.1"
                     /translation="MKKKVGVLVSGRGSNLQALLDACADRAFPAEITLVISNIPGVYA
                     LERAEKAGVPTLVIPHKQFASREDFDAAMDVALRAAGVDFVCLAGFMRLLTKGFVEGW
                     AGRMINIHPSLLPSFKGLHTHERAIEAG"
     gene            complement(547..1623)
                     /gene="purM"
                     /locus_tag="VLL76_02375"
     CDS             complement(547..1623)
                     /gene="purM"
                     /locus_tag="VLL76_02375"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HSV28366.1"
                     /translation="MPAPTDKKGLTYRDAGVDIDAGEALVEAIKPLAKSTARSGGAAG
                     LGGFGALFDPKAAGFKDPILVATTDGVGTKLKVAIESGKHDTVGIDLVAMCVNDLVVQ
                     GAEPLFFLDYFATGKLDVKAGTAIIGGIAEGCRQAGCALIGGETAEMPGMYGNGDYDL
                     AGFSVGAAERDQLLPKEDVKPGDVILGLASSGVHSNGYSLVRRVVVVGGLSYGAPAPF
                     APGKTLGEALLAPTRIYVKSCLAAVRAGTIKALAHITGGGLIENVPRVLPKGVVAQID
                     AKTWTLPPVFAWLAKEGGVEAHEMARTFNCGIGMVVVCSPDKAAEATRILTEAGETVY
                     TIGTIRARNGAEAQSQVTNTEGWV"
     gene            1707..>1967
                     /locus_tag="VLL76_02380"
     CDS             1707..>1967
                     /locus_tag="VLL76_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HSV28367.1"
                     /translation="MPSLRLLGALLILVLVMAPPAFAQGLVDAFSVRGVEVDVTAANV
                     QAAKDQAIADGQRQAFRQLLERLTQPADHARLPKADGVEYVRD"
BASE COUNT          308 a          658 c          688 g          313 t
ORIGIN      
        1 cgcccgcctc gatggcgcgt tcgtgggtgt gcaggccctt gaagctgggc agcagcgacg
       61 gatggatgtt gatcatcctg ccggcccagc cctcgacgaa ccccttggtc agcagccgca
      121 tgaagccggc caggcagacg aagtccacgc cggcggcgcg cagggcgacg tccatggcgg
      181 cgtcgaaatc ctcgcggctg gcgaattgct tgtgcgggat caccagcgtc ggcacaccgg
      241 ccttttccgc ccgctccagg gcgtagacgc cggggatgtt cgagatcacc agggtgattt
      301 cggccggaaa cgcgcggtcg gcgcaggcgt ccagcagggc ctgcaaattg gagccgcgac
      361 cggaaaccag gacgccgacc ttcttcttca tgagatgccc tctagagcag cggaatcata
      421 atccgcgcgt ctaagccgtc atgcccggac ttgatccggg catccacgtg ccaggaacag
      481 cggacaacca gacggaaaga cgtggatggc cgggtcaagc ccggccatga cgcccttcca
      541 aacgccctaa acccagcctt cggtgttggt cacctggctt tgcgcctcgg cgccgttgcg
      601 ggcgcggatg gtgccgatgg tgtacacggt ctcgcccgcc tcggtcagga tgcgggtggc
      661 ctcggccgcc ttgtcgggcg agcacaccac caccatgccg atgccgcagt tgaaggtgcg
      721 ggccatctcg tgggcctcga cgccgccttc cttggcgagc caggcgaaga cgggcggcag
      781 ggtccaggtc ttggcgtcga tctgggcgac cacgcccttg ggcaggacgc gcggcacgtt
      841 ctcgatcagg ccgcccccgg tgatgtgggc cagcgccttg atggtgccgg cgcgcacggc
      901 ggccaggcac gacttgacgt agatgcgggt cggcgccagc agcgcctcgc ccagggtctt
      961 gccgggggcg aagggggcgg gggcgccata ggacaggccg ccgaccacga cgacgcggcg
     1021 gaccagcgaa tagccgttgg aatgcacgcc agaggaggcg aggcccagga tcacgtcgcc
     1081 gggcttgacg tcttccttgg gcagcagctg gtcgcgctcg gcggcgccga ccgagaagcc
     1141 ggccaggtcg tagtcgccgt tgccgtacat gccgggcatc tcggcggtct cgccgccgat
     1201 cagggcgcag ccggcctggc ggcatccttc ggcgatgcca ccgatgatcg cggtgcccgc
     1261 cttgacgtcc agcttgccgg tggcgaaata gtcgaggaag aacaggggtt ccgcgccttg
     1321 caccaccaga tcgttgacgc acatggcgac caggtcgata cccacggtgt cgtgcttgcc
     1381 cgattcgatg gcgaccttca gcttggtgcc gacgccgtcg gtggtggcga ccaggatcgg
     1441 gtccttgaag ccggcggcct tggggtcgaa cagggcgcca aatccgccca gaccggcggc
     1501 gccgccggag cgcgcggtgg acttggcgag cggcttgatg gcctcgacca aagcctcgcc
     1561 ggcgtcgatg tcgacaccgg cgtcgcggta ggtcaggccc ttcttgtcgg tgggggcggg
     1621 aatggtcttc ctcgtaagct agcgtgtgat atggtacggc ccggacactg ggtgggccga
     1681 agatactcca acccggacgg tttgcaatgc cttctctccg ccttctgggc gcgcttctga
     1741 tcctcgttct cgtcatggcg ccgccggcct tcgcgcaagg cctggtcgac gcgttctcgg
     1801 tgcgcggcgt cgaggtcgac gtcaccgccg ccaacgtcca ggccgccaag gaccaggcca
     1861 tcgccgacgg ccagcgccaa gccttccgcc agttgctgga acggctgacg cagccggccg
     1921 accacgcccg cctgcccaag gccgacggcg tcgaatacgt gcgcgac
//
LOCUS       DATIKR010000160         3407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_208141, whole genome shotgun sequence.
ACCESSION   DATIKR010000160 DATIKR010000000
VERSION     DATIKR010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3407
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208141"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /gene="dctP"
                     /locus_tag="VLL76_02385"
     CDS             <1..570
                     /gene="dctP"
                     /locus_tag="VLL76_02385"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HSV28368.1"
                     /translation="WVAGAFGSTGRCLVTPADAKGLRVRPSGAGFADLWRAAGAEPVS
                     DLGSDALPTLLGSNLIQGVDTSTSSMLSYRLYESLRCVTAPDGASLWFLYEPVLVSKK
                     SFDKLDEPRRKALLAAGRRAEADFFATSRDIDAAMVKAFADHGVTVVTLTPAQAKAWT
                     GLARSSSWRAFADRVPGGKDLLERLRSID"
     gene            839..1369
                     /locus_tag="VLL76_02390"
     CDS             839..1369
                     /locus_tag="VLL76_02390"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HSV28369.1"
                     /translation="MRRLLTDEIVGGHLLPGTRLDECEQAKRFHCSRTPVREAFRQLA
                     ALGLVENRPHRGVIVTPRSRRLVLDLYEACAEVLGSCIRLAATRMTDDQFAALAAMTK
                     DDQRVRALLDWAGNKVLCDMVATVWGRLQQFLPATDLLGEVVQGLGRDGDKAADALRA
                     RLMEMRDEACANLPDN"
     gene            complement(1366..2010)
                     /locus_tag="VLL76_02395"
     CDS             complement(1366..2010)
                     /locus_tag="VLL76_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838627.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HSV28370.1"
                     /translation="MEFLAAGALADLLMVIAIDVALAGDNAIVVGMAAAGLPAEQRKR
                     AIIVGIAAAAVMRIVFALFTVQLLQVVGLMFAGGLLLLWVSWKLWRELAAGPEEEAAE
                     AEGEHAVEGEDVPVKKGKDFRSAVTQIIIADVSMSLDNVLAVAGAARDHTWVLVAGLA
                     LSVALMGLAASVVARLLQRHRWVAYVGLAIILYVATTMIWDGAKPLLALASPGA"
     gene            complement(2047..3294)
                     /locus_tag="VLL76_02400"
     CDS             complement(2047..3294)
                     /locus_tag="VLL76_02400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HSV28371.1"
                     /translation="MNLVFFLLAFTAFAVAAASELGGTGGAMEGLAQATLKAAEGAVP
                     LALGLVGVMALFLGLMKVAEAGGLLTATARLLSPLLRRLFPEVPADHPAMGAMVMNVA
                     ANVLGLGNAATPFGIRAMEQLETLNPRKGVASNAQVLFLAINTASVTILPTSVIALRA
                     SVGSADPAAVVAPTLLATLASMVVAVAAARLLQGRFPLTGAAVTPEPTRTEGAALPPY
                     PAWAGMLALAALVALIPLMIVHGKSLGHWIVPGLVVGLLGFGLLRRVAIYETFVEGAK
                     EGFAIGVRIIPYLVAILVAVGMFRASGAMDMLLRPLGTLTAPLGVPAEALAMAAMRSL
                     SGSGSFGLLASYMKDPAIGPDGYVGVLLGTIYGSSETTFYVLAVYFGAVGIRRIRHAL
                     AVGLIADVAGLVAAVLVCLALTS"
BASE COUNT          590 a         1160 c         1173 g          484 t
ORIGIN      
        1 tgggtggccg gcgcattcgg gtccaccggc cgctgcctgg tgacgcccgc cgacgccaag
       61 ggattgcggg tgcggccgtc gggtgccggc ttcgccgatt tgtggcgggc ggccggtgcc
      121 gagccggtca gcgacctggg ctccgacgct ttgccgaccc tgctgggctc gaacctgatt
      181 cagggcgtcg acaccagcac gtccagcatg ctgtcctacc gattgtacga gagcctgcgg
      241 tgcgtcaccg cgcccgacgg cgcctcgctg tggttcctct acgagccggt tctggtctcg
      301 aagaaaagct tcgacaagct tgacgaaccc cggcgcaagg ccctgctggc ggccggccgc
      361 agggccgagg cggacttctt cgccacctcc cgcgacatcg acgccgccat ggtcaaggcg
      421 ttcgccgacc acggcgtaac cgtggtcacc ctgactcccg cccaggccaa ggcctggacc
      481 gggcttgccc gctcgtcgtc atggcgggcc tttgccgacc gggtgcccgg cggcaaggat
      541 ttgctcgagc gtttgcggtc gatcgactga ctaaattgcg gtcagggcgc ttccaagtgg
      601 tgtttcactt gacgcggcgc gcaccgaacg ttaaagcccc aatttctagc ttgggttagc
      661 gaagcggaac caaaaggccc gcttcggaga gatgttcgcc ggtttggcgc agcaagacac
      721 tactcttagg ggaaagagtg tgttatcaat gcgacccacg acgggattta ggtggtttgc
      781 cggcatgcct aggaaagctg cacgcgaaga aagtcaaaag acaacgcagg ccgaaattgt
      841 gcgtcggctc ctgaccgacg aaatcgtcgg cgggcatttg ttgcctggaa cgcggctcga
      901 tgaatgcgag caggctaagc gcttccattg ctcacgcacg ccggtccgtg aggccttccg
      961 gcagttggct gcgttggggt tggtcgagaa ccgcccgcat cggggcgtca tcgtcacccc
     1021 acggtcgcgg cgcctggtgc tggacctcta cgaggcctgc gccgaagtgc tcggctcgtg
     1081 catccgcttg gcagcaaccc gcatgaccga cgaccaattc gccgcgttgg ctgccatgac
     1141 caaagacgac cagcgggtgc gcgccttgct ggattgggcg gggaacaagg ttctgtgcga
     1201 catggtcgcc accgtgtggg gccgcctgca gcaattcctg cccgccaccg acctgttggg
     1261 cgaggtggtg caagggttgg gccgcgacgg cgacaaggca gcggacgcgt tgcgtgcccg
     1321 cttgatggag atgcgcgacg aggcctgcgc caacctgccg gacaattagg cgccggggga
     1381 cgccagcgcc agcagcggct tggcgccgtc ccagatcatg gtggtcgcca cgtacaggat
     1441 gatcgccagg ccgacatagg cgacccagcg gtggcgctgc agcagccgcg ccaccacgct
     1501 ggcggccagg cccatcaacg cgaccgacag cgccaggccg gccaccagca cccacgtatg
     1561 gtcgcgggcc gcgccggcga ccgccagcac gttgtccagc gacatggaca cgtcggcgat
     1621 gatgatctgg gtgacggcac tgcggaaatc cttgcccttc ttgacgggaa catcctcgcc
     1681 ctcgacggcg tgctcgccct ccgcctcggc ggcctcctcc tcggggccgg cggccaactc
     1741 gcgccacagc ttccacgaca cccacagcag cagcaggccg ccggcgaaca tcagccccac
     1801 cacctgcagc aattgcacgg tgaacagggc gaagacgatg cgcatgaccg cggcggcggc
     1861 gatgccgacg atgatggcgc gcttgcgctg ctcggccggc aggccggcgg cggccatgcc
     1921 gaccacgatg gcgttgtcgc cggccagggc cacgtcaatg gcgatgacca tcagcaggtc
     1981 ggcgagggcg ccggcggcaa ggaactccat cggatctccg gatgtaggta ggtttgcgga
     2041 ggcactctaa gaggtgaggg ccaggcagac aagcacggcc gccaccagcc cggcaacgtc
     2101 ggcgatcagc cccaccgcca gggcgtgacg gatgcggcgg atgccgaccg cgccgaaata
     2161 gaccgccagc acatagaagg tggtctcgct ggagccgtag atggtgccca gcagcacgcc
     2221 gacatagccg tcggggccga tggcggggtc tttcatgtag gacgccagca gcccgaacga
     2281 gcccgagccc gacagcgagc gcatggccgc catggccagc gcctcggccg gcacccccaa
     2341 cggcgccgtc aacgttccca gcggccgcag cagcatgtcc atggcgcccg aggcgcggaa
     2401 catgcccacc gccaccagga tcgccaccag atagggaatg atgcgcacgc cgatggcgaa
     2461 gccttccttg gcgccctcga cgaaggtttc gtagatggcg acccggcgca gcaggccgaa
     2521 gcccagcagc cccaccacca gcccgggcac gatccaatgg cccaggctct tgccgtgcac
     2581 gatcatcaac gggatcagcg ccaccagcgc cgccagggcc agcatgccgg cccaggcggg
     2641 ataggggggc agggcggcgc cttccgtccg cgtcggctcc ggcgtcaccg ccgcacccgt
     2701 cagcggaaac cgcccctgca acaggcgggc ggcggcgacc gccacaacca tggacgccag
     2761 cgtcgccaac agcgtcggcg ccaccacggc ggccggatcg gcggatccca ccgaggcccg
     2821 cagcgcgatg acgctggtgg gcaggatggt gacgctggcg gtgtttatgg cgaggaacag
     2881 cacctgggcg ttgctggcga cgcccttgcg cgggttcagg gtctccagtt gctccatggc
     2941 gcggatgccg aatggcgtgg cggcgttgcc caggcccaga acgttggcgg cgacgttcat
     3001 caccatggcg cccatggcgg gatggtcggc cggcacctcg gggaacaggc ggcgcagcag
     3061 cggactcagc aggcgggcgg tggcggtcag caggccgccg gcctcggcca ccttcatcag
     3121 gcccaggaac agcgccatca cgcccaccag ccccagcgcc agcggcaccg cgccctcggc
     3181 cgccttcagg gtggcctggg ccaagccctc catggcgccg ccggtgccgc ccaactcgct
     3241 ggcggcggcg acggcgaagg cggtgaaggc cagcaggaaa aagacgaggt tcaaggcgcg
     3301 aatggtccgg actgtgacaa gtgcgacact agcagaaggc gaaaggccgc gcacccttgc
     3361 cgcctttgtg ggcggttgct aaggtcgggc cgggaacact tgccgct
//
LOCUS       DATIKR010000161         1818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_123354, whole genome shotgun sequence.
ACCESSION   DATIKR010000161 DATIKR010000000
VERSION     DATIKR010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123354"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1159)
                     /gene="livM"
                     /locus_tag="VLL76_02405"
     CDS             complement(<1..1159)
                     /gene="livM"
                     /locus_tag="VLL76_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HSV28372.1"
                     /translation="MAAPPAMDVRRVIADSVIGGLVAAALAFPMLGFKLVDSATGLSL
                     ATRMDWVLWAALIVAGGRLAINLLRMSRKPAAGPSLQDRLGERFAGTRPIVGALMLAI
                     AVVLPFVATRNVVDKATLVLIYVMLGWGLNIVVGLAGLLDLGFVAFYAVGAYSYALLA
                     HHFGLSFWICLPLAGLFAAGFGIALGFPVLRLRGDYLAIVTLGFGEIIRVILQNWSDV
                     TGGPNGISGIPRPTLFGLPFTASAPEGQQTFAEFFGLDFSAEHRVMFLYFVILALAML
                     TNLFTLRIRRLPVGRAWEALREDEIACRSLGINTTNTKLTAFALGAMFGGFAGSFFAT
                     RQGFISPESFNFMESAMILAIVVLGGAGSLLGVVISAVAMVGGVELLRNLGF"
     gene            complement(1161..>1818)
                     /locus_tag="VLL76_02410"
     CDS             complement(1161..>1818)
                     /locus_tag="VLL76_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582635.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HSV28373.1"
                     /translation="VERIAYRPLRGAPKLAPLISAIGMSIVLQNFAQVSQGARVKPLP
                     PVFRGGITLMDSGSFTVSLSYLQIVIVLLTVVLMGVFTWIITKTPLGRAQRATEQDMK
                     MAALLGVDVDRIISLTFVMGAALAAVAGLMVTLYYGVIDFYIGFLAGIKAFTAAVLGG
                     IGSLPGAMLGGLLIGLIEAFWSGYFSIEYKDVAAFSILVLVLLFRPTGLLGRPEVEKI
                     "
BASE COUNT          366 a          589 c          646 g          217 t
ORIGIN      
        1 ggaagccgag gttgcgcaga agctcgacgc cgccgaccat ggccacggcc gagatgacca
       61 cgccgagcag gctgccggcg ccgcccagca ccacgatggc caggatcatc gccgattcca
      121 tgaaattgaa ggattccggc gagatgaagc cctggcgggt ggcgaagaac gagccggcga
      181 agccgccgaa catcgccccc agcgcaaatg cggtgagctt ggtgttggtg gtgttgatgc
      241 cgagcgagcg gcaggcgatc tcgtcctcgc gcaaagcctc ccacgcccgg cccaccggca
      301 ggcggcggat gcgcagggtg aacaggttgg tcagcatggc cagcgccagg atgacgaaat
      361 acaggaacat cacccggtgt tcggccgaga agtcgaggcc gaagaactcg gcgaaggtct
      421 gctggccctc gggcgccgag gcggtgaagg gcaggccgaa cagggtgggg cgggggatgc
      481 cggaaatgcc gttggggccg ccggtgacgt cggaccagtt ctgcaggatg acgcggatga
      541 tctcgccgaa gcccagcgtc acgatcgcca ggtagtcgcc cctcaggcgc agcaccggga
      601 agcccagcgc gatgccgaag ccggcggcga acaggccggc cagcggcagg cagatccaga
      661 acgacaggcc gaaatggtgc gccagcaggg cgtaggaata ggcgccgacg gcgtagaagg
      721 cgacgaagcc gaggtccagc aggccggcca gcccgaccac gatgttgagg ccccagccca
      781 gcatcacgta gatcagcacc agcgtcgcct tgtccaccac gttgcgggtg gcgacgaagg
      841 gcagcacgac ggcaatcgcc agcatcaacg cgccgacgat gggccgggtg ccggcgaagc
      901 gctcacccag gcggtcttgc aggctcggcc cggcggcggg cttgcgcgac atgcgcagca
      961 ggttgatggc gaggcggccg ccggcgacga tcaaggccgc ccacagcacc cagtccatgc
     1021 gggtggcgag cgacaggccg gtggcgctgt caaccagctt gaaacccagc atggggaagg
     1081 ccagcgcggc ggcgaccagg ccgccgatca ccgaatcggc gatgacgcgg cgaacgtcca
     1141 tggccggtgg ggcggccata tcagatcttc tccacttccg gccggcccaa caggccggtg
     1201 gggcggaaca gcagcaccag caccaggatc gagaaggcgg cgacgtcctt gtactcgatg
     1261 gagaaatagc ccgaccagaa cgcctcgatc aggccgatca gcaggccgcc cagcatggcg
     1321 cccggcagcg agccgatgcc gcccagcacg gcggccgtga aggctttgat gccggccagg
     1381 aagccgatgt agaagtcgat gacgccgtaa tacagcgtca ccatcagccc ggcgacggcg
     1441 gccagggcgg cgcccatcac gaaggtcagc gagatgatgc ggtcgacgtc gacgcccagc
     1501 agcgccgcca tcttcatgtc ctgctcggtg gcgcgctgcg cccggcccag cggcgtcttg
     1561 gtgatgatcc aggtgaacac gcccatcagc accacggtca gcagcacgat gacgatctgc
     1621 agatagctca gtgacacggt gaagctgccg ctgtccatca aagtgatgcc gccccggaac
     1681 accggcggca gcggcttgac gcgggcgccc tggctgacct gagcaaagtt ctgcagcacg
     1741 atggacatgc cgatggccga gatcagcggc gccagtttcg gcgcgccgcg cagcgggcga
     1801 taggcgatgc gctcgacc
//
LOCUS       DATIKR010000162         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_147974, whole genome shotgun sequence.
ACCESSION   DATIKR010000162 DATIKR010000000
VERSION     DATIKR010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147974"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..688
                     /locus_tag="VLL76_02415"
     CDS             <1..688
                     /locus_tag="VLL76_02415"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HSV28374.1"
                     /translation="PVLGEKDELDMGARLYPHLIKASGGAYANKAVQRDMRNFAEPLF
                     RTSLRAFQWEITVIDDETPNSWVLPTGKMAVNKGLLRYVANEHELAAVIAHEMAHAEK
                     SHAVAEMKGKPLETLDGPMMELVSSGYSLANEQDADRHILTMFQSTGHDPKKATGVFR
                     TLLEIMPAGGTTSLFNTHAGTRERIAALDAAAQPLPPAAAQPANPGYAGIKQTFPTRQ
                     VFRRIPAAQN"
     gene            complement(860..>2173)
                     /locus_tag="VLL76_02420"
     CDS             complement(860..>2173)
                     /locus_tag="VLL76_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28375.1"
                     /translation="AEDGLTQHALERWRANGDPLWALAAMARVAPSHAATPELLEAFA
                     AMKGRMRDCTAGLPEKAVLPGMAFHAVRLMLGRGALDEAVALAAETHGHATPFTVRWL
                     VANGHVAHARRLSSGDLAPLLDSHGRLAGAPPAVLNLLPPETLAQAALDPSRSDYMRR
                     HLARVAFTRAYLLDGWKRARPLAETLIAIDDQTAPMMRKAKDIWSDRKRDHYLTLVML
                     RNPRFGVRVNEGHVRLPAWEINAAHPSDNNWWCAFDFEREWDRLLFAIFDGPMHLSGF
                     GWDPVGDMGTLRYPPPIPPDEMQRIEAARDAILAAHPILKQVNRAELDRLGAVASGPK
                     YLSEKALAWSQGSTWLTRLLGEDRGVAEALALSVRSTRYGCERAGGHGGYSRAAYETL
                     HRRFPESSHAQATRWWFDCGHFKQGCEPYSAKPYDRGAWGSLWQP"
BASE COUNT          398 a          743 c          698 g          334 t
ORIGIN      
        1 cccagtgctg ggggagaagg acgaactgga catgggcgcc aggctctatc cgcacctgat
       61 caaggcctcg ggcggcgcct atgccaacaa ggccgtccag cgcgacatgc gcaacttcgc
      121 cgaaccgctg ttccgcacct ccctgcgggc gtttcagtgg gaaatcacgg tgatcgacga
      181 cgagacgccc aattcctggg tgctgcccac gggcaagatg gcggtcaaca agggcctgct
      241 gcgctacgtc gccaacgagc acgaactggc cgccgtcatc gcccatgaga tggcccatgc
      301 agaaaagagt catgccgtcg cggagatgaa gggaaagccg ctggagaccc tggacggccc
      361 gatgatggaa ctggtttcgt cgggttattc cctcgccaac gagcaggatg ccgaccgcca
      421 catcctgaca atgttccagt ccaccggcca tgaccccaag aaggccacgg gcgtcttccg
      481 caccctgctg gaaatcatgc cggccggcgg caccacgtcg ctgttcaaca cccatgcggg
      541 cacccgcgaa cgcatcgcag ccctggacgc cgccgcccaa cccctgcccc ctgccgccgc
      601 ccaaccggcg aacccgggct atgccggcat caaacagacc ttccccaccc gccaggtctt
      661 caggcgcatt ccggcagccc aaaattaaac acccccgacc gcggggggat gcggccgggg
      721 gtggtggcga cgggcctcca ggggggagag aggtaccgtc gcaaggggtg ccatcggatt
      781 gaggcggatg gctcctgcgc ctttatactg actaatctag tcgggctttc cgcaaaagtc
      841 aaggcaaatt tgaatcattc tagggttgcc acaaggagcc ccaggcgccc cggtcatacg
      901 gcttggcgct gtagggttcg catccctgct tgaaatggcc gcaatcgaac caccagcggg
      961 tcgcctgggc atgcgacgac tcgggaaagc ggcgatgcaa cgtttcatag gcggcgcggg
     1021 aatagccgcc atggccaccg gcgcgctcgc agccatagcg ggtcgaacgc accgatagcg
     1081 ccagggcttc cgccacgcca cggtcctcgc ccaacagccg cgtcagccag gtcgatcctt
     1141 gcgaccatgc cagcgccttc tcgctcaggt atttcgggcc gctggcgaca gcgcccaggc
     1201 ggtcgagttc cgcccggttg acctgcttca ggatcggatg ggcggccagg atggcgtcgc
     1261 gggccgcctc gatgcgctgc atctcgtcgg gtgggatggg cggcggataa cgcagcgtcc
     1321 ccatgtcgcc caccgggtcc catccgaagc cggacaagtg catggggccg tcgaaaatgg
     1381 cgaacagcag gcggtcccat tcccgctcga aatcgaacgc gcaccaccag ttgttgtcgc
     1441 tagggtgcgc cgcgttgatc tcccaggccg gcagtcggac gtggccttcg ttgacccgca
     1501 cgccgaaacg cggattgcgc agcatcacca gggtcagata atggtcgcgc ttgcggtcgc
     1561 tccaaatgtc ctttgccttg cgcatcatcg gcgccgtctg gtcgtcgatc gcgatcagcg
     1621 tctcggccaa ggggcgggcg cgtttccagc catccagcag ataggcgcgg gtgaatgcca
     1681 cccgggccag atgccgccgc atatagtcgg accgtgacgg gtcgagcgcg gcctgggcca
     1741 gcgtttccgg cggcagcaag ttcagcacgg ccggcggggc gcccgcaaga cgcccatggc
     1801 tgtccagcag aggcgcaaga tcgccactgg aaaggcggcg ggcatgagcg acgtgaccgt
     1861 tggccaccag ccagcgcacg gtgaacggtg ttgcgtgacc atgggtttcc gccgccaaag
     1921 ccacggcttc gtccaatgcg ccgcgcccca gcatcaaacg cacggcatgg aacgccatgc
     1981 ccggcaggac cgccttttcc ggcaggccgg cggtgcaatc ccgcatgcgg cccttcatgg
     2041 cggcaaaggc ctccagcaat tccggcgtcg ccgcatgcga cggcgccacc cgtgccatgg
     2101 cggcaagcgc ccatagcgga tcaccgttgg cccgccagcg ctccagggcg tgctgggtca
     2161 atccgtcctc ggc
//
LOCUS       DATIKR010000163         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_159455, whole genome shotgun sequence.
ACCESSION   DATIKR010000163 DATIKR010000000
VERSION     DATIKR010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159455"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VLL76_02425"
     CDS             <1..725
                     /locus_tag="VLL76_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HSV28376.1"
                     /translation="VTNSAPQIQLFKAIGAEPPAFGHLPLMTDITGAGLSKRLGSLSL
                     RDLRADGIEPMAVNSLLAKLGTSDAIEIRTALDALVDEFDVHHFSRATPKFDPTELGH
                     LNSRLLHALSFDDAKARLEAVGLRDAGADFWEAVRPNLANMAEAKEWWTVVQGPVQPV
                     IEDAAFCAEAAKVLPPEPWDLTTWSAFTNAVKAATGRKGKDLFHPLRLALTGRERGPE
                     LKNLLPLIGRERAAKRLAGETA"
     gene            845..>1752
                     /gene="cysS"
                     /locus_tag="VLL76_02430"
     CDS             845..>1752
                     /gene="cysS"
                     /locus_tag="VLL76_02430"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HSV28377.1"
                     /translation="MPLVLYNTLTRKKEAFEPIRPDHVGMYVCGPTVYDRAHIGNARP
                     VIVFDVLYRLLTKLYPAVTYVRNITDVDDKINARAKDSGEPIDAITARTTKMFHEDIA
                     ELNALPPTIEPRATAHIGQMIAMIEALIAKGHAYEAEGHVLFSVPSMSDYGALSRRSM
                     DEMIAGARVEVAPYKKNAADFVLWKPSSSDLPGWDSPWGRGRPGWHIECSAMSGQYLG
                     QTFDIHGGGQDLVFPHHENEIAQSQCANGAPFARYWLHNGYLMVEGEKMSKSLGNFFT
                     VRELLEQAPGEAIRLAMLSTHYHQPF"
BASE COUNT          310 a          614 c          551 g          277 t
ORIGIN      
        1 atgtgaccaa ctcggcgccg cagatccagt tgttcaaggc catcggcgcc gagccgccgg
       61 ccttcggcca cctgccgctg atgaccgaca tcaccggtgc cggcctgtcc aagcgcctgg
      121 gctcgctgtc gctgcgcgac ctgcgcgccg acggcatcga gccgatggcg gtcaattccc
      181 tgttggcgaa gctcggcacc tcggacgcca tcgaaatccg tacggcgctc gacgccttgg
      241 tggacgagtt cgacgtccac cacttctcgc gcgccacccc gaaattcgac cccaccgaac
      301 tgggccacct caattcccgc ctgctgcacg cgctgtcgtt cgacgacgcc aaggcacggc
      361 tggaggcggt gggcctgcgc gacgccggcg ccgatttctg ggaggcggtg cggcccaatc
      421 tcgccaacat ggccgaggcc aaggaatggt ggacggtggt gcaggggccg gtgcagccgg
      481 tgatcgagga tgccgccttc tgcgccgagg ccgccaaggt gctgccgccc gagccgtggg
      541 acctgaccac atggtcggcc ttcaccaacg cggtcaaggc cgccaccggc cgcaagggca
      601 aggacttgtt ccaccccctg cgcctggcct tgacgggccg cgagcgtgga cccgaactga
      661 agaacctgct acctctgatc ggccgcgaac gggccgccaa gaggctggcc ggtgagacgg
      721 cctaggcttt tccttttcgt catggccggg ctcgacccgg ccatccacgt ggtgccgctg
      781 gcaagacgtg gatgcccgga tcaagtccgg gcatgacggt gattagattg gtgagagaaa
      841 cgcgatgccg ctggtcctgt acaacacgct gacccgcaag aaggaagcct tcgagccgat
      901 ccggcccgac catgtcggca tgtatgtctg cggccccacc gtctatgacc gcgcccatat
      961 cggcaacgcg cggccggtga tcgtgttcga cgtgctctac cgcctgctga ccaagctgta
     1021 tccggcggta acctacgtcc gcaacatcac cgacgtggac gacaagatca acgcccgcgc
     1081 caaggattcg ggcgagccga tcgacgccat cacggcgcgc accaccaaga tgttccacga
     1141 ggacatcgcc gaactgaacg cgctgccgcc gaccatcgag ccgcgcgcca ccgcccatat
     1201 cggccagatg atcgccatga tcgaggcgct gatcgccaag ggccacgcct acgaggcgga
     1261 gggccacgtg ctgttcagcg tccccagcat gtccgattac ggcgccctgt cgcgccggtc
     1321 catggacgag atgatcgccg gcgcccgcgt cgaggtggcg ccctacaaga agaacgccgc
     1381 cgacttcgtg ctgtggaagc cgtcctcgtc cgacctgccc ggctgggaca gcccgtgggg
     1441 acgcggccgg cctggctggc acatcgaatg ctcggccatg agcggccaat atctcggcca
     1501 gaccttcgac atccacggcg gcggccagga tctggtgttc ccgcaccatg agaacgaaat
     1561 cgcccagtcg caatgcgcca acggcgcgcc tttcgcccgc tattggctgc acaacggcta
     1621 tctgatggtc gagggcgaga agatgtccaa atccttgggc aacttcttca ccgtgcgcga
     1681 attgctggag caggcgccgg gcgaggccat ccgcctcgcc atgctgtcga cccactacca
     1741 ccagccgttc ga
//
LOCUS       DATIKR010000164         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_195960, whole genome shotgun sequence.
ACCESSION   DATIKR010000164 DATIKR010000000
VERSION     DATIKR010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195960"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..919
                     /locus_tag="VLL76_02435"
     CDS             74..919
                     /locus_tag="VLL76_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012284692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSV28378.1"
                     /translation="MLSPAADSLSPRDFSRLAEFIQGYSGIRMPPVKKTMVEGRLRRR
                     VRALGLSSLSEYCSRLFEEGWLESEFVNLINVVTTNKTDFFREPEHFRLLAERVLPEW
                     VAAGRGLDTPLKVWSAASSTGAEPYTLAMVLDDCARRNRGFRFKILATDISTDVLDKA
                     RHAVYPHEMIAPVPPEWQRRYFLRSRDTTQSIVRIVPQLRQSVHFGRLNLMDESYPVE
                     TGLDVVFCRNILIYFDKPTQQGVLQRLCDHLRPGGLLFVSHTETVTGMDLPIRQVAAS
                     VFARK"
     gene            927..>1583
                     /locus_tag="VLL76_02440"
     CDS             927..>1583
                     /locus_tag="VLL76_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28379.1"
                     /translation="MARKIKVLIVDDSATVREALSEILSSDPEIEVMDTAADPFAAAR
                     RLQREVPDVITLDVEMPRMDGITFLRKLMAQHPVPVVMCSSLAEEGSDTLMQILEAGA
                     VEVILKPRVDTKRLLMESRIRICDAVKGAAHARLKSRPGGTKIPRQPEPKLSADVMLP
                     PPHGGAMANTTAKVICIGASTGGTESLRAVLEALPANAPGIVIVQHMPEKFTAAFARR
                     L"
BASE COUNT          258 a          546 c          512 g          267 t
ORIGIN      
        1 gtcatcattt tcgacctgac gcgcctgttc tcggccgagg aggccgtgct ggtgtcgtcg
       61 gtagggtagg gcgatgcttt cccccgccgc cgacagtctg agcccgcgcg acttctcgcg
      121 tctggccgag ttcatccagg gttacagcgg catccgcatg ccgccggtca agaagaccat
      181 ggtcgaggga cgcttgcgcc gccgggtgcg cgccctcggg ctgtcgagcc tgtccgaata
      241 ttgcagccgc ttgttcgagg agggctggct ggaaagcgag ttcgtcaacc tcatcaacgt
      301 ggtgacgacc aacaagaccg acttcttccg cgaacccgag catttccgcc tgctggccga
      361 gcgcgtgctg ccggaatggg tcgccgccgg ccgaggcctg gacacccccc tgaaggtctg
      421 gagcgccgcc agctcgaccg gcgcagagcc ttataccctg gccatggtgc tggacgattg
      481 cgcgcggcgg aatcgcggct tccgcttcaa gatcctggcg accgacatct ccaccgacgt
      541 gctcgacaag gcgcgccatg ccgtctaccc gcacgagatg atcgcgccgg tgccgccgga
      601 atggcagcgg cgctacttcc tgcgctcccg cgacaccacg caaagcatcg tcaggatcgt
      661 tccgcagctt cggcaatccg tgcatttcgg gcgcctgaac ctgatggacg agtcctatcc
      721 ggtcgagacc gggctggacg tcgtcttctg ccgcaacatc ttgatctatt tcgacaagcc
      781 gacccagcag ggggtattgc agcggctgtg cgaccatctg cggccgggcg gcctgctgtt
      841 cgtcagccac accgagacgg tcaccggaat ggacctgccc atccgccagg tggcggcgtc
      901 ggtcttcgca aggaagtgat gccgccatgg cgcgcaagat caaggtcctg atcgtcgatg
      961 actcggccac cgtccgcgag gccttgtcgg aaatcctgtc gtcggatccc gaaatcgagg
     1021 tcatggacac ggcggccgat ccgttcgccg ccgcgcgccg gctgcagcgc gaggtgcccg
     1081 acgtcatcac gctggacgtc gagatgccgc gcatggacgg catcaccttc ttgcgcaagc
     1141 tgatggccca gcacccggtg ccggtggtga tgtgctcctc gctggccgag gaggggtcgg
     1201 acacgctgat gcagatcctg gaggccggcg cggtcgaagt catcctgaag ccgcgcgtcg
     1261 ataccaagcg gctgttgatg gaatcgcgca tccgcatctg cgacgccgtc aagggcgccg
     1321 cccacgcgcg gctgaaaagc cggccgggcg gcacgaagat tccccgccag ccggaaccca
     1381 agctgagcgc cgacgtcatg ttgccgccgc cccacggcgg tgccatggcg aacaccaccg
     1441 ccaaggtgat ctgcatcggc gcttccaccg gcggcaccga gtccctgcgc gccgtgctgg
     1501 aggccctgcc ggccaacgct cccggcatcg tcatcgtgca gcacatgccc gagaagttca
     1561 cggcggcctt cgcccggcgc ctc
//
LOCUS       DATIKR010000165         4678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_111349, whole genome shotgun sequence.
ACCESSION   DATIKR010000165 DATIKR010000000
VERSION     DATIKR010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4678
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111349"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VLL76_02445"
     CDS             <1..243
                     /locus_tag="VLL76_02445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28380.1"
                     /translation="NRSNVPITGRDPVANAVRGPDPAAVQRILDSQGHKNAAPPPTAQ
                     AGSQDWFAGAMMKGLDKYEQAARLNRPADAPSVTVQ"
     gene            complement(247..912)
                     /locus_tag="VLL76_02450"
     CDS             complement(247..912)
                     /locus_tag="VLL76_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014746944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HSV28381.1"
                     /translation="MSDVVANLAAVNLAIAEAARASERDPAAVTLVAVSKTHDADAIR
                     PVLAAGHRVFGENRVQEARSKWPDLKNEFPGVELHLIGPLQTNKVREAVALFDVIETV
                     DRPKLARALADEMTRAGRRPAVLVQVNTGHEDQKAGIAPEQADALIRLCRREYGLPVA
                     GVMCIPPVDQDPAPHFRLLAEIAARNGLAVVSMGMSGDYPEAIRHGATHVRVGSAIFG
                     SRA"
     gene            943..1539
                     /locus_tag="VLL76_02455"
     CDS             943..1539
                     /locus_tag="VLL76_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HSV28382.1"
                     /translation="MTLADHARRLKFTRPRGLPPAFLLTDETRLPDPAAVMMRLPAGT
                     GVLLRLYGVADHLALAERIAAVARSRRLVLAVAADWRLAARLGAAVIHLPEGIGRSGR
                     NAPLLDWARRRGVAVTMACHSPRAVAAARRLGADAALLSPVFATASHPGAAVIGAVRF
                     RLWRARAGLPVYALGGIDARSLRRLNGGGFAAIAGWGA"
     gene            complement(1595..2749)
                     /locus_tag="VLL76_02460"
     CDS             complement(1595..2749)
                     /locus_tag="VLL76_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HSV28383.1"
                     /translation="MKKVLFASTALVAAGLMTASGASASEKIKLNLGGYSKWWVVGAW
                     QDDGFSKSNGGGAGTDYANVDVKGDNEIFFGGETKLDNGMTVGVMVELEAGGDVAGNP
                     AGSDRIDKSYAYVETAYGKVIIGSEANGTALLHVMAPDAAGNTDSDGLLTGGFAIQSP
                     GINSKVSTAIDTDGEAEKITYVAPTFYGLTVGGTYIPNAGSEDNRGVVTAGETYGVGA
                     LYANTFGGVGVKVSAGFVTYDIAATTENTNEYSAGTQLSYNGFTLGGSYRQIVEDKKG
                     NIMPAGNSVANTNTSNDGRVWDIGLQYASGPWAVSAVYFNSKIQDGIATGQDEFTVYQ
                     VSGKYTLGAGVDALATIGHAEYDDETQERAGGDANHNKGWAVMTGLGLTF"
     gene            3030..3551
                     /locus_tag="VLL76_02465"
     CDS             3030..3551
                     /locus_tag="VLL76_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3576 domain-containing protein"
                     /protein_id="HSV28384.1"
                     /translation="MKTKVASVAAVAIALTGLLSACDNSKAVYPTRDRNASAPRMDNE
                     PRETVFGPEGLFGKNKKDQDGVGLGVNSFLWRASLDTLAFMPIATADPFGGTIITDWY
                     QLAESPNERFKLNVFILDRALRADGVKASVFKQVRDATGQWVDVKVDPRMAADLENSI
                     LTRARQLRIVSTE"
     gene            3640..>4678
                     /locus_tag="VLL76_02470"
     CDS             3640..>4678
                     /locus_tag="VLL76_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSV28385.1"
                     /translation="MSRIDDRYNVKEAESKWQRIWEERGSFTAVEDPSRPKYYALEMF
                     PYPSGRIHMGHVRNYTLGDVVARTKRAKGFNVLHPMGWDAFGLPAENAAIERGVHPAK
                     WTRENIAAMREQLKTMGLSYDWSREIATCEPEYYRHEQRMFLDFLKAGLVYRKESWVN
                     WDPVENTVLANEQVIDGRGWRSGALVEKRLLSQWFLKITAFADDLLDSLKTLERWPER
                     VRIMQENWIGRSEGARLSWDLKDRSDRLEIFTTRPDTLFGAAFCAISANHPLAAELAA
                     NNAELAEFIAECNRLGTSEAALETAEKKGFDTGLKALHPFVPGWELPVFVANFVLMEY
                     GSGAIFGCPAHD"
BASE COUNT          734 a         1558 c         1614 g          772 t
ORIGIN      
        1 aaccgctcga acgtgccgat caccggccgc gacccggtgg ccaacgccgt tcgcggcccc
       61 gacccggcgg cggtgcagcg catcctcgac agccagggcc acaagaacgc ggcgccgccg
      121 ccgaccgccc aagcgggatc gcaggattgg ttcgccggcg cgatgatgaa gggcctggac
      181 aagtacgaac aggcggcaag gctcaaccgc ccggccgatg cgccatccgt tacggtacaa
      241 taacggtcag gcccggctgc cgaagatggc ggagccgact cgcacatggg tggcaccgtg
      301 gcggatggcc tcgggatagt cgccgctcat gcccatgctg accacggcca ggccgttgcg
      361 cgcggcgatc tccgccagca ggcggaaatg cggtgccgga tcctggtcca ccggcgggat
      421 gcacatcacg cccgccaccg gcagcccgta ttcccgacgg cacaatctga tcagcgcgtc
      481 ggcctgttcg ggggcgatgc cggccttctg gtcctcgtgg ccggtgttga cctgcaccag
      541 caccgccggg cggcggccgg cccgggtcat ctcgtcggcc agggcgcggg ccagcttggg
      601 gcggtccacc gtctcgatca cgtcgaacag cgccaccgcc tcgcgcacct tgttggtctg
      661 aagcgggccg atcagatgca gctcgacgcc ggggaattca ttcttgaggt ccggccattt
      721 ggaccgcgcc tcctgcaccc ggttctcgcc gaacacgcgg tggccggcgg cgaggaccgg
      781 gcggatcgcg tcggcatcat gggtcttgct gacggcgacc agggtgacgg ccgccggatc
      841 gcgctccgag gcgcgggcgg cttcggcgat ggcgaggttg acggcggcaa ggttggcgac
      901 gacgtcggac aatggacccg aagctcctgt agaatggcgg ccatgaccct agcagaccac
      961 gcgcgccgac tcaaattcac ccgccccagg ggcctgccgc cggccttcct gttgaccgac
     1021 gaaacacggt tgcccgatcc ggcggcggtg atgatgcgcc tgcccgccgg cacgggggtg
     1081 ttgctgcggc tttacggcgt cgccgaccac ttggccctgg ccgagcgaat tgccgccgtc
     1141 gcgcgatcgc ggcggctggt cctcgccgtg gccgcggact ggcggctggc ggcgcgactg
     1201 ggggcggccg tgatccatct gcccgagggg atcgggcggt cggggcgcaa tgcgccgctg
     1261 ctggattggg cgcgccggcg cggggtggcc gtcaccatgg cctgccactc gccgcgtgcg
     1321 gtggcggcgg cccgccggct gggggcggat gcggcgctgc tgtcgccggt cttcgccacc
     1381 gccagccatc ccggtgcggc cgtgatcggt gcggtgcggt tccggctgtg gcgggcgcgg
     1441 gcgggtttgc cggtctatgc cctgggcggg atcgacgcgc gctcgctccg tcgcctgaac
     1501 ggcggcggct tcgccgccat cgccggatgg ggggcctgaa aaagaaaagg gcggccgaag
     1561 ccgccctttc ccgaaacgaa ccggacgtga ccgattagaa ggtcaggccc agaccggtca
     1621 tgacagccca acccttgttg tggttggcgt cgccaccggc gcgctcctgg gtctcgtcgt
     1681 cgtattcggc gtggccgatg gtggccaggg cgtcgacgcc ggcgcccagg gtgtacttgc
     1741 ccgacacctg gtagacggtg aactcgtcct gaccggtggc gatgccgtct tggatcttcg
     1801 agttgaagta gacggcgctg accgcccacg gacccgaagc gtactgcagg ccgatatccc
     1861 acacgcgacc gtcgttcgag gtgttggtgt tggcgaccga gttgcccgcg ggcatgatgt
     1921 tgcccttctt gtcttcgacg atctggcggt acgaaccgcc cagggtgaag ccgttgtagg
     1981 acagctgggt accggcgctg tactcgttgg tgttctcggt ggtggcggcg atgtcgtagg
     2041 tgacgaagcc ggccgaaacc ttgacgccga cgccgccgaa ggtgttggcg tacagggcgc
     2101 cgacgccata ggtctcaccg gcggtgacga cgccgcggtt gtcttccgag ccggcgttgg
     2161 ggatgtaggt gccgccgacg gtcagaccgt agaaggtcgg agcgacatag gtgatcttct
     2221 cggcctcgcc gtcggtgtcg atggcggtgg agaccttgct gttgatgccc gggctctgga
     2281 tggcgaagcc gccggtcagc aggccgtcgg aatcggtgtt gccggcggcg tcgggggcca
     2341 tgacgtgcag cagggcggtg ccgttggctt cggaaccgat gatgacctta ccgtaggcgg
     2401 tctcgacata ggcatagctc ttgtcgatgc ggtcgctgcc ggccggattg ccagccacgt
     2461 cgccgccggc ttccagctcg accatcacgc cgacggtcat gccgttgtcc agcttggtct
     2521 cgccgccgaa gaagatttcg ttgtcgccct tgacgtcgac gttggcgtag tcggtgccgg
     2581 caccgccgcc gttggacttc gagaagccgt cgtcctgcca ggcgccgacg acccaccact
     2641 tggaatagcc gcccaggttc agcttgatct tttccgaggc cgaggcgccc gaggcggtca
     2701 tcagaccggc ggcgaccagc gcggtgctcg cgaacagaac cttcttcatg ttaactcctc
     2761 tctattggct ttccggatgc cggggcaccc ggatccaaat gaacgaacga gcctgatcca
     2821 gccacatcga acggggcagg tcaacacgca gacggtgccc gatgtgctta atggcgcgca
     2881 ctgtggcgcc gatgcaacag tcgcgggatc gccccggccg gccgggggcc acagcatttt
     2941 gttgcggggg cctcgcgcgc ggtgcattct cagccacgcc gcccccggtc gggtgcgggc
     3001 tcgttcgcgt atgtaaaggc ttggggaaca tgaagaccaa agtggccagt gtggcggcgg
     3061 tggcgattgc ccttacgggg ctgctgtcgg cctgcgacaa ttcgaaggcg gtctatccca
     3121 ccagggaccg caatgccagc gcaccccgca tggacaacga gccgcgcgag accgtgttcg
     3181 gccccgaggg cctgttcggc aagaacaaga aggatcagga cggcgtcggc ctgggcgtca
     3241 actcgttcct gtggcgcgct tcgctcgaca ccctggcgtt catgcccata gccaccgccg
     3301 acccgttcgg cggcaccatc atcaccgatt ggtaccagtt ggcggaatcg cccaacgagc
     3361 ggttcaagct gaacgtcttc atcctcgacc gcgcgctgcg cgccgacggc gtcaaggcgt
     3421 cggtgttcaa gcaggtgcgc gacgccaccg gccaatgggt ggacgtcaag gtcgatccgc
     3481 gcatggcggc cgacctcgag aactcgatcc tgacccgcgc ccgccagctg cgcatcgtct
     3541 cgaccgaata ggcttgccgt ttccgtcatg cccggacgtg atccgggccg gatcgccggg
     3601 tcacgcccgg cgatgacgtt tcgggtgatt gaggacccca tgtcgcgcat cgatgatcgt
     3661 tacaatgtga aggaagccga atccaagtgg cagcggatct gggaggagcg cggctccttc
     3721 accgccgtcg aggatccgtc gcggcccaaa tactacgcgc tcgagatgtt cccctatccg
     3781 tcggggcgca tccacatggg gcacgtgcgc aactacacgc tgggcgacgt ggtggcgcgg
     3841 accaagcggg ccaagggctt caacgtgctg catcccatgg gctgggacgc cttcggcctg
     3901 ccggccgaga acgccgccat cgagcgcggc gtgcatcccg ccaagtggac gcgcgagaac
     3961 atcgccgcca tgcgcgagca gctgaagacc atgggcctgt cctacgactg gtcgcgcgaa
     4021 atcgccacct gcgagccgga atactaccgg cacgaacagc gcatgttcct ggacttcctc
     4081 aaggccgggc tggtttaccg caaggaatcc tgggtcaatt gggatccggt cgagaacacc
     4141 gtgctggcca acgagcaggt gatcgacggc cgcggctggc gctcgggcgc gctggtggaa
     4201 aagcgcctgc tgtcgcaatg gttcctgaag atcaccgcct tcgccgacga cctgctcgac
     4261 agcctcaaga cgctggagcg ctggcccgag cgcgtgcgca tcatgcagga gaactggatc
     4321 ggccggtccg agggcgcccg cctgagctgg gacctcaagg accgctccga ccgcctggaa
     4381 atcttcacca cccgccccga caccctgttc ggcgccgcct tctgcgccat ctcggccaac
     4441 cacccgctgg ccgccgaact ggccgccaac aacgccgaac tggccgagtt catcgccgaa
     4501 tgcaaccgcc tgggcacctc ggaagcggcg ctggaaaccg ccgagaagaa gggcttcgac
     4561 accggcctca aggcgctgca cccgttcgtg ccgggctggg agctgccggt cttcgtcgcc
     4621 aatttcgtgc tgatggaata cggctcgggc gccatcttcg gctgccccgc ccatgacc
//
LOCUS       DATIKR010000166         2526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_2517, whole genome shotgun sequence.
ACCESSION   DATIKR010000166 DATIKR010000000
VERSION     DATIKR010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2517"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1056)
                     /gene="leuB"
                     /locus_tag="VLL76_02475"
     CDS             complement(<1..1056)
                     /gene="leuB"
                     /locus_tag="VLL76_02475"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HSV28386.1"
                     /translation="MKTFNIAVLAGDGIGPEVMREAVKVLRVVEKKFGFALHLIEAPV
                     GWAGIDAAGQALPDATLELCRKSDAILFGSVGLPERDPTIPREERPERAALLRIRKEF
                     GLFANLRPVRLLKALAHACPLRPERQGEGIDLLVVRELTGGLYFGQPKKTEAVDGGHR
                     AVDTMVYATPEIERIARAAFGAARLRRGKVTSIDKANVLENGALWRDVVTRIGREYPD
                     VTLEHQFVDNTAMQLMLRPTQFDVMLCENLFGDILSDEAAALAGSLGMLPSASLGATS
                     GEKTFGLYEPAGGTAPDIAGRNLANPIAQILSAALLLRHSFGLNEAASAVEAAVGQAI
                     AAGNRTVDIFSAGERGAR"
     gene            1351..>2526
                     /locus_tag="VLL76_02480"
     CDS             1351..>2526
                     /locus_tag="VLL76_02480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28387.1"
                     /translation="MITTIKLATAAALVSATFILSPFARAQSTNILDASGDVFTTAGG
                     GILDITSVEVANNAFDLVFTIHLAGNPVAADWGKYMIAFDTVPGGDPTGNGWARPISM
                     SSGMDYWVGAWVDGGNGGQVWTHSVAWSQTGSASVTKTTSNVTVAFPFAALGLSPGDT
                     FEFDVYTSGGGGDGAIDALSNPSQTVAIWGGPYDSMLKSSHTIANVPAQTNRVTFTVN
                     MTNATGTDATVYDAATRVFINGNFTGWDLNEGDGDWGATPRAELEMTRIGDSSLHTIT
                     LPIPPGHPLRLVYKFSMNGFDNEAGFAMDHVGYIRAAPGQIAHTMPLDTWIGTNTVAL
                     ANREEARFGNLRAAPAGPGQVSLAWDGLKCVSLQSSTGLSGFVTDTNTAGLSSTNVAT
                     "
BASE COUNT          428 a          922 c          765 g          411 t
ORIGIN      
        1 gcgggcgccg cgttcgcccg cgctgaagat gtccaccgtc cggttgcccg ccgcgatggc
       61 ctggccgacc gcagcctcga cggccgacgc cgcctcgttc aacccgaagc tgtgccgcag
      121 caggagcgcc gccgagagaa tttgcgcgat gggattggcc agattcctgc cagcgatgtc
      181 cggggcggtg ccgcccgccg gctcgtagag gccaaacgtc ttttcgccgc tcgtcgcgcc
      241 gaggctcgcg ctgggcaaca tgccgagcga cccggccagt gccgccgcct cgtcgcttaa
      301 aatgtcgccg aacaggttct cgcacaacat cacgtcgaac tgagtcgggc ggagcatgag
      361 ttgcatggcc gtgttgtcca cgaactggtg ctccagcgtc acgtccgggt attcccggcc
      421 gatgcgcgtc accacgtcgc gccacagcgc gccgttttcg agcacgttcg ccttgtcaat
      481 gctcgtcacc ttcccgcgcc gcaaccgcgc cgcgccgaag gcggcgcgcg cgatgcgctc
      541 gatttccggc gtcgcgtaca ccatcgtgtc caccgcgcgg tggccgccgt caaccgcctc
      601 ggtcttcttc ggctgcccga aatacaggcc gcccgtcagc tcgcgcacaa ccaggaggtc
      661 aatgccctcg ccctgccgct cggggcggag gggacaggcg tgggccaggg ccttcagcaa
      721 acgcaccggg cgcaggttgg cgaacagacc gaactccttg cggatgcgca acagcgccgc
      781 gcgctccggc cgctcctccc tgggaatcgt cgggtcgcgt tccggcaggc cgaccgagcc
      841 aaacaggatg gcgtcggatt tccggcacag ttcgagtgtg gcgtccggca gcgcctggcc
      901 ggcggcgtca atgcccgccc agccgacggg cgcctcgatc aggtggaggg cgaagccgaa
      961 tttcttttcc acaacgcgca gcactttgac ggcctcgcgc atcacttccg gcccgatgcc
     1021 gtcgccagcc agcacggcaa tgttaaaggt cttcatggaa tcgtcatccc cagcgggggg
     1081 cgcgagctta ggcaagcgcc cggcggcagc caacgataat tccatcgtca tcccacgcgc
     1141 gcgcggtgag agccgtcttc gaccgcatga acgtgcggtg gttgtttgac cgccatggtg
     1201 atacaggtag ccacgccatg ggaccgctga cacggatgcc cgttgttgtc atgcaaccga
     1261 ttcaccgcca gaaccccatt gggtcgcggc cggttcgccg ccgcggcggg tcgtagcggg
     1321 cgcaaacacc ccaccccact ccaaacctcc atgatcacga ccatcaaact cgcgaccgcg
     1381 gcggcgctcg tttccgccac cttcatcctc tccccgttcg cgcgggcgca gagcaccaac
     1441 atcctggatg cctccggcga cgtcttcacc accgccggcg gcggcatcct cgacatcacc
     1501 tccgtcgagg tcgccaacaa cgcctttgac ctcgtcttca ccatccatct cgccggcaac
     1561 ccggtggccg ccgattgggg caaatacatg atcgcgttcg acacggtccc cggcggggat
     1621 ccgacgggca acggctgggc gcgccccatt tccatgtcca gcggcatgga ctattgggtg
     1681 ggcgcctggg tggatggcgg caatggcggg caggtttgga cgcattccgt cgcctggagc
     1741 cagaccggct cggccagcgt caccaaaacc acgtccaacg tgacggtggc gtttcctttc
     1801 gccgcgctgg gcctgtcgcc cggcgacacc ttcgagttcg atgtctatac cagcggcggc
     1861 ggcggggatg gcgccattga cgcgctttcc aaccccagtc agaccgtcgc catctggggc
     1921 ggcccctatg attcgatgct gaaaagttcc cacaccatcg ccaacgtccc cgcgcaaacg
     1981 aaccgggtga ccttcaccgt caacatgacc aacgcgacgg gcacggacgc gacggtctat
     2041 gacgccgcca cccgggtgtt catcaacggc aacttcaccg gctgggacct caatgaaggg
     2101 gacggcgact ggggcgccac gccaagggcg gaactcgaaa tgacccgcat tggcgattcg
     2161 tccctgcaca ccatcacgct ccccattcct cccggacatc ccctgcgctt ggtctataag
     2221 ttctcgatga acggattcga caacgaggcc ggcttcgcca tggaccatgt cggctacatc
     2281 cgcgcggccc ccggccaaat cgcccacacc atgccgctgg acacttggat cggcacgaac
     2341 acggtggctc tcgccaaccg cgaggaagcc aggttcggca acctcagagc cgcgcccgcc
     2401 ggccccggcc aggtcagcct cgcctgggac ggcctcaagt gcgtcagcct gcaatcctcc
     2461 accgggctgt cgggcttcgt caccgacacc aacaccgccg gcctcagttc caccaacgtg
     2521 gccacc
//
LOCUS       DATIKR010000167         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_111365, whole genome shotgun sequence.
ACCESSION   DATIKR010000167 DATIKR010000000
VERSION     DATIKR010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111365"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VLL76_02485"
     CDS             <1..209
                     /locus_tag="VLL76_02485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28388.1"
                     /translation="TLRGIDLIKAIRAIRPELPCLLCSGYAEELNEAACKDSGVGEML
                     RKPVGFSEMIAAIERNLTPVTTNG"
     gene            295..816
                     /locus_tag="VLL76_02490"
     CDS             295..816
                     /locus_tag="VLL76_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV28389.1"
                     /translation="MRNAIIPTGKERMLHDGEIIVSKTDLKGRIQYANDTFLRISGFL
                     PQELVGAPHNVIRHPDMPRCVFKLLWDTIQAKGEIFAYVVNISKNGDHYWVLAHVTPS
                     FDRAGAHIGYHSNRRKPERGALRAIEPLYRTLRAIERRAGDPRQGLADAAAHLNAILA
                     EKGMAYDQFVFSL"
     gene            791..>1706
                     /locus_tag="VLL76_02495"
     CDS             791..>1706
                     /locus_tag="VLL76_02495"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV28390.1"
                     /translation="MTNSSSLSKAGILAGSGILLHVVHSVLALAIPGQGAELAAAEGL
                     LVLVPVALAGLYWARSLKMLREVGDVLASGGSGDLDARIFAVPEPGVVGRLQRGTNVM
                     LDVTDAFMREAAGSAQYLSQRKYFRKVLPQGLPGVFNIAAVTMNKAAEVMAANVDDFS
                     RFAENNVGSVVDGITSAATELRSAAEAMTSMADDLSSLTAQIGSKANHSSAVAEKVAH
                     EVVQTNAIVGNLTVAAQTVEHVVNIISEISRKTELLAINATIEAAKAGQMGRGFAVVA
                     AEIKALALQTEGATKDIAAEIGEMKHVVG"
BASE COUNT          319 a          540 c          562 g          285 t
ORIGIN      
        1 cgacgctgcg gggcatcgac ctgatcaagg cgatccgcgc gatccgcccc gaactgccgt
       61 gcctgctgtg ctcgggatat gccgaggagc tgaacgaggc cgcctgcaag gattcgggcg
      121 tcggcgagat gctgaggaag ccggtcgggt tcagcgaaat gattgccgcg atcgaacgca
      181 atctgacccc tgtaacgacc aacggataac gaccttcgcg actctgtgcg taaggggtcg
      241 ttcgtgagag tttcgtcggg ggctcttcgg gagggagaac agaaggaacg gtgaatgcgc
      301 aacgcgatta taccgaccgg aaaggagcga atgctccacg acggcgaaat catcgtgagc
      361 aagacggacc tcaagggtcg tatccaatac gccaatgaca cctttctccg catttcggga
      421 ttcctgccgc aagaactggt cggcgcgccg cacaacgtca ttcgccaccc cgatatgccg
      481 cgctgtgttt tcaagctgtt gtgggacacc atccaggcga agggggaaat cttcgcctac
      541 gtggtcaaca tctcgaagaa tggcgaccat tactgggtcc tggcccatgt gacccccagc
      601 ttcgaccgcg ccggcgccca tatcggctac cactccaacc ggcgcaagcc ggaacggggc
      661 gcccttcgcg cgatcgaacc gttgtaccgg acgctgcggg cgatcgagcg ccgggcgggc
      721 gacccccgcc agggcctggc cgacgccgcc gcccacctca acgcaatcct ggccgagaag
      781 ggaatggcct atgaccaatt cgtcttctct ctctaaggcg ggaatactgg ccggttcagg
      841 catcctgctg cacgttgtcc attccgtgct ggcgttggcg atcccgggcc aaggcgccga
      901 actggccgct gccgagggtt tgctggtcct ggttccggtg gctttggcgg gcctctattg
      961 ggcgcggtca ttgaagatgc tgcgcgaagt cggcgacgtg ctggcctcgg gcggcagcgg
     1021 cgatcttgac gcgcgcatct tcgcggtgcc cgaacccggc gtcgtcgggc ggctgcaacg
     1081 cggcaccaac gtcatgctcg acgtcaccga cgccttcatg cgcgaggccg ccggctcggc
     1141 ccagtatctc agccagcgga aatacttccg caaggtgttg ccgcagggtc tcccgggcgt
     1201 cttcaacatc gccgccgtga ccatgaacaa ggccgccgag gtgatggcgg ccaacgtcga
     1261 tgacttcagc cgcttcgccg agaacaacgt cggttcggtg gtcgatggca tcacctcggc
     1321 cgcgaccgag ctgcgctcgg cggccgaagc gatgacctcc atggccgacg acctgtcgtc
     1381 cttgacggcg cagatcggca gcaaggcgaa ccattcgtcg gccgtggcgg aaaaggtggc
     1441 gcacgaggtc gtccagacca acgccatcgt gggcaacctc acggtcgcgg cgcagaccgt
     1501 cgagcacgtc gtcaacatca tcagcgagat ttcgcgcaag accgaattgc tggcgatcaa
     1561 cgccaccatc gaggcggcca aggcggggca gatgggccgg ggtttcgcgg tggtggccgc
     1621 cgagatcaag gcgctggcgc tgcagaccga gggcgcgacc aaggacatcg ccgccgagat
     1681 cggcgagatg aagcatgtgg tgggcc
//
LOCUS       DATIKR010000168         3876 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_123421, whole genome shotgun sequence.
ACCESSION   DATIKR010000168 DATIKR010000000
VERSION     DATIKR010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123421"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1265
                     /locus_tag="VLL76_02500"
     CDS             <1..1265
                     /locus_tag="VLL76_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV28391.1"
                     /translation="TKLMNRHTVMENLGIAIGRAERGGHRLGALFLDVNRFKDVNDSF
                     GHAAGDELLVQVARRLKSCVRATDILGRIGGDEFVLVLPSIPDPGAALACVEKVIYAF
                     SEPFTIAGTELYCSTSVGIAVYPDDADGAGALLSCADAAMYHAKQSGRHYRFYDHDMN
                     RQAVERVNLENDIRKAIAGGQFRLNYQPKVDGSNRRVVGAEALIRWRHPERGDVSPAL
                     FIPVAERAGLVGAIGDFTLFEACHQIRQWRDQGLDVPCISINLSPAQFHDATLKDKVE
                     HALRENRLEPSALELEITETMMATEVDRAISILTELGTMGVRISIDDFGTGYSSLAYL
                     KLFPVHALKIDRAFVKELPGNAKDGAIIASVVALATNLGFECIAEGVETPVQAEFLLT
                     KNCTTMQGWLFSSAVEADVFGRYLRDGL"
     gene            complement(1459..2442)
                     /locus_tag="VLL76_02505"
     CDS             complement(1459..2442)
                     /locus_tag="VLL76_02505"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV28392.1"
                     /translation="MAEPVVSIIVNNYNYGRFLAAAIDSALAQDYPACEVIVVDDGST
                     DDSRQVIARYGHEVCAVLKRNGGQGSAFNAGLAISRGRVVHFLDADDTLHPDAAARAV
                     EALSDPSVCQFLAPLDLIDADGARTGAIFPDHELPSGDLKERALGYGPWAYQVVPTSG
                     NFWARWYLEKVMPIPEERFLVGGDEYLSAIAALYGRLASDRRTIGCYRGHGANVYWRA
                     RLGVEDVADDAFYFERISALIAEHADRLGLAVDPSRWLDSDWRQQVRQVVLHRAGRRP
                     GRPAPAQVLRAVWRDQTRPHRKAVLMPAVAAMLALPHWPSLALGLKLLGRR"
     gene            complement(2435..3823)
                     /locus_tag="VLL76_02510"
     CDS             complement(2435..3823)
                     /locus_tag="VLL76_02510"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSV28393.1"
                     /translation="MAGLRALAWRGGLTMAARQVTGMVVSFAGLVALARLIGPAAYGV
                     YVSAFALHAAVSLLLQWGVDVYLIRKPTPPEPEEIDQAFTLLLIAGAAGAALAWPAGW
                     LAEAWVGIDGIHVAVGTLFAGMPMQLVAAVPSGLLQRDMAYGKVAAAELAGQVALYGG
                     GVAAALAGLGLEAPLLGWALQQAVMTPLFFVLARCRPRLAWQPDLLRPMVAFGAGYAS
                     SVGAWHLRGLVNPLVVARLLGPEAAAAVAVALRLVEALAFMKTVLWRVAMPALGRLQS
                     DPARLSAGVAEGVRLQVLAVGPALAVFALLAPWLVPFAFGKDWGAVARVFPYLAVAGL
                     VGAAFSLHSVVLALLGRNGDVAVFHLVNALLLAAAAAVAVPRLGLAGYCLAEGAALSS
                     YGLLHARAVAAIGPVDVGLGLVWVVAFALPLFADLLGPAAWVGPPAVLLLPATRRALA
                     GWWSQIKELAHG"
BASE COUNT          676 a         1464 c         1240 g          496 t
ORIGIN      
        1 tgaccaagct gatgaaccgt cacaccgtga tggagaattt gggcatcgcc atcggccggg
       61 ccgagcgggg cggtcaccgg ctgggggcgc tgttcctgga cgtcaaccgc ttcaaggacg
      121 tcaacgacag cttcggccac gcggccggcg acgaattgct ggtccaggtc gcccgccgcc
      181 tgaagtcgtg cgtgcgcgcc accgacatcc tgggccgcat cggcggcgac gaattcgtgc
      241 tggtgctgcc cagcatcccc gaccccggcg ccgccctggc ctgcgtggaa aaggtgatct
      301 acgccttctc cgagccgttc accatcgccg gcaccgagct gtattgctcg acctcggtgg
      361 gcatcgccgt ctatcccgac gacgccgatg gcgccggcgc gctgctgtcc tgcgccgacg
      421 cggccatgta ccacgccaag caatcgggcc ggcattaccg cttctacgac cacgacatga
      481 accgccaggc ggtggagcgg gtcaacctcg agaacgacat ccgcaaggcc atcgccggcg
      541 gccagttccg cctcaactac cagcccaagg tggacggctc gaaccgccgg gtggtgggcg
      601 ccgaggcgct gatccgatgg cgccatcccg agcgcggcga cgtctcgccc gccctgttca
      661 tcccggtggc cgagcgtgcc ggcctggtcg gcgccatcgg cgacttcacc ctgttcgagg
      721 cctgccacca gatccgccag tggcgcgacc agggcctgga cgtgccgtgc atcagcatca
      781 acctgtcgcc ggcccagttc cacgacgcca ccttgaagga caaggtcgag cacgcgcttc
      841 gggagaaccg gctggagccc agcgcgctgg agctggaaat caccgaaacc atgatggcga
      901 ccgaagtgga ccgcgccatc tcgatcctga ccgaattggg caccatgggg gtccgcatct
      961 cgatcgacga tttcggcacc ggctattcgt cgctggccta tctcaagctg ttcccggtgc
     1021 acgcgctgaa gattgaccgc gccttcgtca aggaattgcc gggcaacgcc aaggacggcg
     1081 ccatcatcgc ctcggtggtg gccctggcca ccaacctggg cttcgaatgt atcgccgagg
     1141 gcgtcgagac gccggtccag gcggaattcc tgctgaccaa gaactgcacc accatgcagg
     1201 gctggctgtt cagttcggcg gtcgaggccg acgtgttcgg ccgctacctg cgcgatgggc
     1261 tttaggctgc ggataaaccc gggttgaagt ttccaagcca gtggccgtca tgcccggact
     1321 tgatccgggc atccacgcag gtcagcctaa gccactgctt tcaaacgaga ttctgcgacg
     1381 ccgcgtggat ggccgggtca agcccggcca tgacggcaaa ggcacaatgc gccgttcgac
     1441 gaggtgttcc ccatctatct agcgccttcc caacagcttc agccccagcg ccagcgacgg
     1501 ccagtgcggc agcgccagca tggcggcgac cgccggcatc agcacggcct tgcggtgcgg
     1561 ccgcgtctgg tcgcgccata ccgcgcgcag aacctgggcg ggagccggcc ggcctgggcg
     1621 gcggccggca cgatgcagca ccacctgccg cacctgctgg cgccagtcgc tgtccaacca
     1681 tcgcgaggga tcgacggcca gtcccaggcg gtcggcgtgt tcggcgatca gggcgctgat
     1741 gcgctcgaaa tagaaggcat cgtcggccac gtcctcgacg cccagccggg cgcgccaata
     1801 gacgttggcg ccatgaccgc gatagcagcc gatggtgcgg cggtcggacg ccagccggcc
     1861 atacagggcg gcgatggccg acaggtattc gtcaccgccg accaggaagc gttcctccgg
     1921 gatcggcatc accttctcca gataccagcg cgcccagaaa ttgcccgagg tcggcaccac
     1981 ctgataggcc cacgggccgt atcccagcgc ccgctccttc aaatcgcccg agggcaattc
     2041 gtggtcggga aagatcgcgc cggtgcgggc gccgtcggcg tcgatcaggt cgagcggcgc
     2101 caggaattgg cacaccgacg gatcggacag ggcttcgacc gcccgcgcgg cggcatcggg
     2161 gtgaagtgtg tcgtcggcgt cgaggaaatg caccacccgg ccgcggctga tggccaagcc
     2221 ggcgttgaag gcggaaccct ggccgccgtt gcgtttcaac accgcgcaca cctcgtggcc
     2281 gtagcgggcg atgacctggc gcgagtcgtc ggtcgagccg tcgtccacca cgatgacctc
     2341 gcaggcggga tagtcctggg ccagcgcgct gtcgatggcg gcggcgagga agcggccgta
     2401 attgtagttg ttgacgatga tgctcaccac cggctcagcc atgggccagc tccttgatct
     2461 gcgaccacca gcccgccagc gcccgccgcg tcgccggcag cagcagcacg gccggcggcc
     2521 cgacccacgc cgccggcccc agaaggtcgg cgaacagcgg cagcgcgaag gccaccaccc
     2581 aaaccaggcc caagcccacg tccaccggac cgatggcggc gacggcgcgg gcgtgcagca
     2641 ggccatagga cgacagcgca gccccctcgg ccaggcaata gccggccagt cccaggcgtg
     2701 gcaccgcaac ggcggcggcg gcggccaaca gcaaggcgtt gaccagatgg aacaccgcca
     2761 cgtcgccgtt gcgccccagc agggccagca ccaccgaatg caggctgaag gccgccccca
     2821 ccagccctgc caccgccaga taggggaaca cccgcgccac cgcgccccaa tccttgccga
     2881 aggcgaacgg caccagccac ggcgccagca gggcgaacac ggccagcgcc ggccccaccg
     2941 ccagcacctg cagccgcacc ccctcggcca cccccgccga cagccgcgcc ggatcggatt
     3001 gcaggcgccc cagcgccggc atcgccaccc gccacagcac cgtcttcatg aaggccagcg
     3061 cctcgaccag ccgcaacgcc accgccaccg ccgccgccgc ctccggcccc agcaggcggg
     3121 cgaccaccag cggattgacc agcccgcgca ggtgccacgc ccccaccgac gatgcatagc
     3181 cggcgccgaa cgccaccatg ggccgcagca gatcgggctg ccaagccagg cgcgggcggc
     3241 agcgggccag tacgaagaac agcggcgtca tcaccgcctg ctgcaacgcc cagcccagca
     3301 gcggcgcctc caaccccagc ccggccaggg cggccgcgac cccgccgcca tacagcgcca
     3361 cctgccccgc cagctccgcc gccgccacct tgccgtaggc catgtcgcgc tgcagcaggc
     3421 ccgagggcac cgccgccacc aattgcatcg gcatgccggc gaacaacgtg cccaccgcca
     3481 catggatgcc gtcgatcccc acccacgcct ccgccagcca ccccgccggc cacgccagcg
     3541 ccgcccccgc cgcgccggca atcagcagaa gcgtgaaggc ctggtcgatt tcctcgggtt
     3601 cgggcggtgt cggcttgcgg atcagataga cgtcgacgcc ccattgcagc agcagcgaca
     3661 ccgccgcatg cagggcgaag gcgctgacgt agacgccata ggccgccggc ccgatcagcc
     3721 gtgccagcgc caccaatccg gcgaacgaca ccaccatgcc cgtcacctgg cgcgccgcca
     3781 tggtcagccc gccgcgccat gccaaagccc gaagccccgc caatcgcctc tccttcccag
     3841 ccgccctctg gtatgggccg ggcgaccatt ggcggc
//
LOCUS       DATIKR010000169         1887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_14287, whole genome shotgun sequence.
ACCESSION   DATIKR010000169 DATIKR010000000
VERSION     DATIKR010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14287"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..921)
                     /gene="mtnA"
                     /locus_tag="VLL76_02515"
     CDS             complement(<1..921)
                     /gene="mtnA"
                     /locus_tag="VLL76_02515"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019535021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HSV28394.1"
                     /translation="MLQTIAWTEDAVRLLDQTRLPAETVYVDIANEKQMWDAIQRLVV
                     RGAPAIGVAAAFGVYLGVRGHKGREIFGFYGRLNEVCDYLATSRPTAVNLFWAIDRMR
                     RTARDAGRATHSANPDYAVDVVKQRLLAECLRMLDEDTAVCRAIGMHGAELLAAVRST
                     GFSLHPEEQAKACTTNSLNILTHCNAGGLATVCYGTALAPIYVGTERGMRFHVWSDET
                     RPLLQGSRITAFELQANGIPVTVICDNMAATVMKQGRVDAVIVGTDRVAANGDVANKI
                     GTYLKALAAHDNGVPFWVALPHSTLDMRVRD"
     gene            complement(965..>1887)
                     /locus_tag="VLL76_02520"
     CDS             complement(965..>1887)
                     /locus_tag="VLL76_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013178454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HSV28395.1"
                     /translation="LPLVALASATAAVLTLIVLGGIRQSSRVNIAIVSLTILSLLAFI
                     LAGLPLAFSKGASNLMTGGAQASGGFWPGVLHATALMFVAYTGYGRIATLGEEVHHPR
                     QTIPRAIIVTLWFSASLYIGVAIVAVAAVGADELGTTARTQAAPLEVAARQFPLAGIH
                     WIVAAGAMTAMLGVLLNLILGLSRVLLALGRRGDMPRAVSRLDPAGATPWVAVIVVGA
                     IIIALTLIGDVKTTWSFSAFTVLIYYAITNLAALFLPDADRLYGRWLAWAGLGACLFL
                     AFWVEPRIWVTGLGILGVGLIWQRLASALR"
BASE COUNT          351 a          576 c          675 g          285 t
ORIGIN      
        1 gtcgcgcacg cgcatatcca gcgtggaatg cggcagcgcc acccagaagg gcacgccatt
       61 atcatgcgcg gccagggcct tgaggtaggt gccgatcttg ttggccacat cgccattggc
      121 ggccacgcgg tcggtgccga cgatcaccgc atccacgcgt ccctgcttca tgaccgtcgc
      181 cgccatgttg tcgcagatga cggtgacggg gatgccgttg gcttgaagct cgaaggcagt
      241 aatgcggctg ccctgaagga ggggccgggt ttcgtcggac cagacgtgaa atctcatccc
      301 gcgttctgtg ccgacgtaga tcggcgcgag ggcggtgccg tagcagacgg tggcgaggcc
      361 gccggcattg cagtgggtga ggatgttgag actgttcgta gtacaggctt tagcctgctc
      421 ttccggatgc aggctaaagc ctgtactacg aacggccgcc agcaactccg caccatgcat
      481 accgatcgcc cggcagacgg cggtatcctc atcgagcatc ctgaggcact cggccagcag
      541 gcgctgcttg acgacatcca cagcatagtc ggggttggcg ctgtgggtgg cccggccggc
      601 gtcgcgtgcg gttcggcgca tgcggtcgat ggcccagaag agattgacgg ccgtcgggcg
      661 gctggtggcg aggtagtcgc agacctcgtt gagccggcca tagaagccga agatctcgcg
      721 tcctttgtgc ccgcgcacgc cgagatagac gccgaacgcg gccgccacgc cgatggccgg
      781 cgctccgcga acaaccagcc gctggatggc atcccacatc tgcttttcgt tggcgatgtc
      841 cacgtaaacg gtctcggccg gcaggcgggt ctgatcgagc aggcggactg cgtcttcggt
      901 ccaggcgatg gtctgaagca ttaccggatt atagttgttc gcgcacgccg gtgcgaagcg
      961 ggcgtcaccg caatgccgag gcgagccgct gccagatcaa tcccacgcca aggatgccca
     1021 gccccgtcac ccagatgcgc ggctcgaccc agaaggcgag gaagaggcac gcacccagtc
     1081 ccgcccaggc cagccagcgg ccatagagcc ggtcggcatc gggcaggaac agggcggcga
     1141 gattggtgat cgcgtagtag atcagcacgg tgaatgcgct gaaggaccag gtggtcttca
     1201 catcgccgat gagcgtcagg gcaatgatga tcgcaccgac gacgatgacg gcaacccacg
     1261 gcgttgcacc ggccgggtcg agccggctga cggcgcgggg catgtcgccg cgccggccca
     1321 gggcgagcag cacgcgtgag aggccgagga tgaggttgag cagaacgccc agcatggccg
     1381 tcatcgcccc cgccgcgacg atccagtgga tgcccgccag cgggaactgc cgcgcggcga
     1441 cttcgagagg ggcggcctgt gtccgggctg tcgtgccaag ttcatcagcg ccgaccgcgg
     1501 cgacggcgac gatggccaca ccgatgtaga gcgaggccga aaaccagagc gtgacgatga
     1561 tcgcgcgggg aatggtctgg cgggggtgat gtacttcctc gccgagcgtg gcaatccggc
     1621 cgtagccggt atatgcgacg aacatgaggg cggtggcgtg gagcacgccg ggccagaacc
     1681 cgcccgaagc ttgcgcgccg ccggtcatca ggtttgaagc gcctttggag aacgccaggg
     1741 gcaggcccgc gagaatgaag gcgagcaggg agaggatggt cagcgagacg atggcgatgt
     1801 tgacccggct ggactggcgg atgccgccga gcacaatgag cgtcagcacg gcggccgttg
     1861 ccgacgcgag ggccacaagg ggaagcc
//
LOCUS       DATIKR010000170         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_172062, whole genome shotgun sequence.
ACCESSION   DATIKR010000170 DATIKR010000000
VERSION     DATIKR010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172062"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VLL76_02525"
     CDS             <1..831
                     /locus_tag="VLL76_02525"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HSV28396.1"
                     /translation="RDYRLVEEALQELDKVPMQVLIEATIAEVGLSDELRYGLQWFFE
                     AGTNQFRFSSATTGVVSPQFPSFAYVGQTSSIRVVLDALNSVTAVNVLSAPKLVVLDN
                     ELARLQVGDQVPVPVQSAVSTLNPDSPIVNTIQFRDTGIILEVMPRISSAGTVTMEVR
                     QEVSDVVGTTSSGIDAPTIQQRSIVSTVAVESGQTVALGGLIRDRNSNGRSGIPLLMD
                     IPVAGHLFGTTTKTIDRTELLVLISPKIIRSPAESRKVTDELRRRMKSLESAREFFER
                     "
     gene            812..>1611
                     /locus_tag="VLL76_02530"
     CDS             812..>1611
                     /locus_tag="VLL76_02530"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28397.1"
                     /translation="MSSSSDRQGGFALLSVLWGLAFLGVLAAAIAAVATDRAHRARNL
                     AEAARAEALADAGFVHGVAHLLEHAGDPLWRADGQPYALDLGDGRVEIVLRDEAGRVD
                     VNYADQALLAGLLAGAGLDAEAAEALADAIQDWSDGDDLRRLNGAEAADYRDAGIDPP
                     ANRPFALVAELARVKGMRPDLLRRLEPHLTIHSRQRGLDPTVASAELLALLPGVTPER
                     VEGLVRPAGIQATALGQFIGLDPRHVVASKRQVFSIRAAARTSGGGTFV"
BASE COUNT          243 a          564 c          553 g          251 t
ORIGIN      
        1 cgcgactacc ggctggtcga agaggcgctg caggaattgg acaaggtgcc catgcaggtg
       61 ctgatcgagg ccaccatcgc cgaggtcggg ctatccgacg aattgcgcta cggcctgcaa
      121 tggttcttcg aggccggcac caaccagttc cgcttctcgt cggccaccac cggcgtggtg
      181 tcgccgcaat tccccagctt cgcctatgtc ggccagacca gcagcatccg cgtggtgctg
      241 gacgcgctca actcggtgac ggcggtcaac gtgctgtcgg cgcccaagct ggtggtgctg
      301 gacaacgagc tggcgcggtt gcaggtgggc gaccaggtgc cggtgccggt gcagtcggcg
      361 gtcagcacgc tcaatcccga ctcgcccatc gtcaacacca tccaattccg cgacaccggc
      421 atcatcctgg aggtgatgcc gcgcatcagt tcggccggca ccgtcaccat ggaggtgcgg
      481 caagaagtca gcgacgtggt cggcaccacg tcgtccggca tcgacgcccc caccatccag
      541 cagcgctcga tcgtcagcac ggtggcggtg gaaagcggcc agacggtggc attgggcggc
      601 ctgatccgcg accgcaacag caatggccgc tcgggcatcc cgctgttgat ggacatcccg
      661 gtggcgggcc acctgttcgg caccaccacc aagaccatcg accgcaccga attgctggtg
      721 ctgatctcgc ccaagatcat ccgcagcccg gcggaaagcc gcaaggtcac cgacgaattg
      781 cgccggcgca tgaagagcct ggaaagcgcc cgtgagttct tcgagcgata ggcagggcgg
      841 tttcgccctg ctcagcgtgc tgtgggggct ggcgttcctg ggcgtgttgg cggcggccat
      901 cgcggcagtc gcgaccgacc gcgcccaccg tgcccgcaac ctggccgagg ccgcccgcgc
      961 cgaagccctg gccgatgccg gcttcgtcca tggcgtggcg cacctgctgg agcatgccgg
     1021 cgatcccctg tggcgggcgg acggccagcc ctatgccctg gacctgggcg acggccgggt
     1081 cgaaatcgtg ctgcgcgacg aggccgggcg ggtggacgtc aactacgccg accaggccct
     1141 gctggctgga ttgctggccg gcgccgggct ggatgccgag gcggccgagg ccctggccga
     1201 tgccatccag gattggtcgg acggcgacga cctgcgccgg ctcaacggcg ccgaggccgc
     1261 cgattaccgt gatgccggca tcgatccgcc ggccaaccgg ccgttcgccc tggtcgccga
     1321 actggcgcgg gtcaagggca tgcggcccga tctgctgcgc aggctggagc cgcatctcac
     1381 catccattcc cgccaacgcg gccttgatcc gaccgtcgcc tcggccgagt tgctggcgct
     1441 gctgcccggg gtgacgccgg aacgggtcga gggactggtg cgcccggccg gcatccaggc
     1501 cacggcgctg ggccagttca tcggcctcga tccccgccat gtggtggcgt cgaagcgtca
     1561 ggtcttctcc atccgcgccg ccgcccgcac ttccggcggc ggcactttcg t
//
LOCUS       DATIKR010000171         5360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_2616, whole genome shotgun sequence.
ACCESSION   DATIKR010000171 DATIKR010000000
VERSION     DATIKR010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2616"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..334
                     /locus_tag="VLL76_02535"
     CDS             35..334
                     /locus_tag="VLL76_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 domain-containing protein"
                     /protein_id="HSV28398.1"
                     /translation="MPPKPPVLGREAAEALALQAVAVIVADEDLLPRFLAATGSGAED
                     LRARIADPDFLGAVLDFVLERDDTVHTLAEACGIAPETILLARAKLPGGPTDWTP"
     gene            331..993
                     /locus_tag="VLL76_02540"
     CDS             331..993
                     /locus_tag="VLL76_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HSV28399.1"
                     /translation="MSDLDKLRARLRALRTKTVANGCTEVEALAAAEKVAELVDRYDL
                     SLVDLEPEASRCVQAVVEVRKKQRQAVAAVVGAIADFCDCKVWRERDAGGRVRYVFFG
                     LPAGVEMAQAVYDMVAAALQTAWDGFAAGRSVIRYGDDEKGSFLIGMAVSIADKLAAL
                     KAERAGGGGTALVVTRQAVVEHEFAGLGLALRQSGPSGKAVAAAAFDAGLAAGAGFTL
                     KS"
     gene            1085..1750
                     /locus_tag="VLL76_02545"
     CDS             1085..1750
                     /locus_tag="VLL76_02545"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011766390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV28400.1"
                     /translation="MSLRINAEAPNFTAETTQGTIDFHQWIGDGWAILFSHPKDFTPV
                     CTTELGYMAGLKAEFDKRNCKILGLSVDPVDSHAKWAKDIEETQGHAVNYPLIGDPDL
                     KVVKLYDMLPDDAGDTAQGRTASDNATVRSVFVIGPDKKIKAMLTYPMSTGRNFDEVL
                     RILDSCQLTREHQVATPVNWHPGDDVIIVPSMSDDEARQRFPDGWTAPRPYMRIVHQP
                     GAR"
     gene            1806..2339
                     /gene="mog"
                     /locus_tag="VLL76_02550"
     CDS             1806..2339
                     /gene="mog"
                     /locus_tag="VLL76_02550"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005422732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HSV28401.1"
                     /translation="MTQPIRIGIVTVSDRASTGVYEDKGGPAIADWLGKALTSGWQPV
                     ARVIPDEQPVIEATLRELADSEGCCLIVTTGGTGPAKRDVTPEATEAVCDKMMPGFGE
                     LMRAVSLKFVPTAILSRQTAGIRGNSLIVNLPGKPSAIADCLEAVMPAIPYCVDLIDG
                     PFLETDESFCKAFRPKK"
     gene            complement(2349..3425)
                     /locus_tag="VLL76_02555"
     CDS             complement(2349..3425)
                     /locus_tag="VLL76_02555"
                     /inference="COORDINATES: protein motif:HMM:NF018549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HSV28402.1"
                     /translation="MGITAVAGLEVEDRVVLDTPFLLLHHYRKPLRGPEPAVLVVAPM
                     SGHFGWLMRDTVLGLLPRHEVLLLEWKDAREVPVAAGRFDLDRTISGVMDCVRLLGPG
                     LTLLGVSQSATTILAATALMAAQNDPSRPCGLVLMGGFIDPRPRPTAVERLVSSLPDG
                     WFSRVLAGSVPDGDLGAGRRVYSARYHWQALARYLARHMLSGRELQRKTLADDGADCD
                     TFPFLRLYSTLMDLPVEFADDVATRIFRQAHLARGLLSWQGHAVEPAAIEDVALMTVE
                     GARDDSSGRGHTLMAHALAHRIPDALREHHIEDEAGHFSLFHGRLWREAILPEVETFI
                     ALAARQCPVRVRRRARPKDRHART"
     gene            3564..4007
                     /locus_tag="VLL76_02560"
     CDS             3564..4007
                     /locus_tag="VLL76_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV28403.1"
                     /translation="MLVKTILKAKARGAGVVTVSPDASVAEAAKLLATNRIGALIAVE
                     PDGAIAGILSERDIVRGVALQGELCLRAIVRDLMTAAVLTCHEDDTIESLMQTMTAKR
                     VRHLPVIDADSKLMGIVTIGDVVKTRLDEASMEVDNLRHYVSASR"
     gene            complement(4160..4483)
                     /gene="soxZ"
                     /locus_tag="VLL76_02565"
     CDS             complement(4160..4483)
                     /gene="soxZ"
                     /locus_tag="VLL76_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HSV28404.1"
                     /translation="MPAQIKTRIPSKAAKGEIIEIKAQVTHDMESGNRKDASGKVLPR
                     RIINKMVCTWNNDVVCSSDWYPAMSGNPFISFHALATESGKITLKFHDDNGEIHEASA
                     DIVVE"
     gene            complement(4506..4958)
                     /gene="soxY"
                     /locus_tag="VLL76_02570"
     CDS             complement(4506..4958)
                     /gene="soxY"
                     /locus_tag="VLL76_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HSV28405.1"
                     /translation="MSELEIGRRGFLAAAGAGVIAATVLPKGAAATPQEADDFAKKLI
                     GNAVPKEGKVQLKLKDVAESGANEPVSVVVDSPMTAADHVKAIHVIADGNPNPGVSSW
                     HLTPRSGKAEVSFRMRLGKTQTVRAYAVMSDGSVYMAKQEIKVTIGGC"
     gene            5140..>5360
                     /locus_tag="VLL76_02575"
     CDS             5140..>5360
                     /locus_tag="VLL76_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28406.1"
                     /translation="MTIRRKFFLAFGLILATSIAGLVINGVIALRQFKLTEDVARVSA
                     VVSEEQIPFIETTKNLQLDIARIQGLFTD"
BASE COUNT          868 a         1769 c         1864 g          859 t
ORIGIN      
        1 ccgcgcccgc gaggcgttca gctaaggaac agtgatgccg cccaaacctc ccgttcttgg
       61 ccgcgaggcc gccgaagcgc tggcgctgca ggcggtggcg gtgatcgtcg ccgacgagga
      121 cctgctgccg cgcttcctgg cggcgaccgg cagcggtgcc gaagatctgc gcgcccgcat
      181 cgccgatccc gatttcctgg gtgcggtgct ggatttcgtg ctggagcgcg acgacacggt
      241 ccacactttg gccgaggcct gcggcatcgc ccccgaaacc atcctgctgg cccgcgccaa
      301 gctgccgggt ggcccgaccg actggacgcc gtgagcgatc tcgacaagct gcgggcgcgg
      361 ctccgggcgc tgcgcaccaa gacggtggcc aacggctgca ccgaggtcga agccctggcc
      421 gccgccgaga aggtggccga gctggtggac cgctacgacc tgtcgcttgt ggacctggaa
      481 ccggaagcgt cgcgttgcgt ccaggcggtg gtggaggtgc gaaagaagca gcgccaggcc
      541 gtggccgccg tggtcggcgc catcgccgac ttctgcgatt gcaaggtctg gcgagaaagg
      601 gacgcgggcg gccgcgtccg ctacgtcttc ttcggcctgc ccgccggtgt cgagatggcc
      661 caggcggtct acgacatggt cgccgccgcg ctgcagacgg catgggacgg cttcgccgcc
      721 ggccgaagcg tcatccgcta cggcgacgac gagaagggtt cgttcctgat cggcatggcg
      781 gtgtccatcg ccgacaagct ggcggccctg aaggccgagc gcgcgggcgg cggcggaacg
      841 gccctggtgg tgacgcgcca agcggtggtg gagcacgaat tcgccggcct ggggctggcg
      901 ctgcgccaaa gcgggccgtc gggcaaggcg gtggcggcgg cagcgttcga cgccggcctt
      961 gccgccggtg ccggcttcac cttgaagtcc tagctctttc cggcctatcc cgcctgcgac
     1021 ctgggctttc ggctttgccg tgcttacgct gtggcttccc atttgtcggg acggaggagc
     1081 cgccatgtcg ctcaggatca atgccgaagc gcccaacttc accgccgaga ccacccaggg
     1141 gacgatcgac ttccaccagt ggatcggcga cggctgggcc atcctgttct cgcatcccaa
     1201 ggacttcacc ccggtctgca ccaccgaatt gggctacatg gcggggctga aggcggaatt
     1261 cgacaaacgc aactgcaaga tcctcggcct cagcgtcgat cctgtcgaca gccatgcgaa
     1321 atgggccaag gacatcgagg aaacccaggg ccacgcagtc aactatccgc tgatcggcga
     1381 ccccgatctc aaggtggtca agctgtacga catgctgccc gacgatgccg gcgacaccgc
     1441 ccagggccgc accgcctcgg acaacgccac ggtgcgctcg gtgttcgtga tcgggccgga
     1501 caagaagatc aaggccatgc tgacctatcc catgagcacc ggccgcaatt tcgacgaggt
     1561 gctgcgcatc ctggattcct gccagttgac gcgcgagcat caggtggcga cgccggtcaa
     1621 ctggcacccg ggcgacgacg tcatcatcgt gccgtccatg tccgacgacg aggcgcggca
     1681 gcgcttcccc gacggctgga cggcgccgcg cccctacatg cggatcgtgc accagcccgg
     1741 agcgcggtga caacgggcgg acgggcggct aggatcggct ccccctcagt tccaggagcc
     1801 gatccatgac ccaacccatc cgcatcggca tcgtcaccgt ctcggaccgc gccagcaccg
     1861 gcgtgtacga ggacaagggc ggtcccgcca tcgccgactg gctgggcaag gcgctgacca
     1921 gcgggtggca gccggtcgcc cgcgtgatcc ccgacgagca gccggtgatc gaggcgacgc
     1981 tgagggaact ggccgattcc gaggggtgct gtctgatcgt caccaccggc ggcaccgggc
     2041 cggccaagcg cgacgtgacg cccgaggcca ccgaggcggt gtgcgacaag atgatgccgg
     2101 gcttcggcga attgatgcgg gcggtcagcc tgaaattcgt ccccaccgcc atcctgtcgc
     2161 gccagaccgc cggcatccgc ggcaacagcc tgatcgtcaa cctgcccggc aagcccagcg
     2221 ccatcgccga ttgcctggaa gcggtgatgc ccgccatccc ctattgcgtc gacctgatcg
     2281 acggtccgtt cctggaaacc gacgagagct tctgcaaggc gttccggccg aagaagtaga
     2341 gcagggcgtc aagtccgggc atgacggtcc ttggggcgtg cgcgtcgccg cacccgcacc
     2401 gggcattgcc gggcggccag ggcgatgaag gtctcgacct cgggcaggat cgcctcgcgc
     2461 cacaggcggc cgtggaacag gctgaaatgg ccggcctcgt cctcgatgtg gtgctcgcgc
     2521 aaggcatcgg ggatgcggtg ggccaaggcg tgggccatca gggtgtggcc gcggcccgag
     2581 gaatcgtcgc gggcgccttc caccgtcatc agcgccacgt cctcgatggc cgccggctcg
     2641 accgcgtggc cctgccacga cagcaggccg cgcgccaggt gggcctggcg gaagatgcgg
     2701 gtggcgacgt cgtcggcgaa ctcgaccggc aggtccatca gggtggaata cagcctgagg
     2761 aagggaaagg tatcgcagtc ggcgccgtcg tcggccagcg tcttcctctg caactcgcgc
     2821 cccgacagca tgtgccgcgc cagatagcgg gccaacgcct gccagtggta gcgcgccgaa
     2881 tagacccggc ggccggcgcc caggtcgcca tcgggaacgc tgccggccag cacgcgcgag
     2941 aaccagccgt cgggcagcga cgacaccagc cgctcgacgg cggtggggcg cgggcggggg
     3001 tcgatgaagc cgcccatcag caccaggccg cacggccgcg acgggtcgtt ctgcgccgcc
     3061 atcagggcgg tggcggccag gatggtggtg gccgactggc tgacccccag cagggtgagg
     3121 cccggcccta gcaggcgcac gcaatccatc accccggaaa tggtgcggtc gaggtcgaag
     3181 cggccggcgg ccaccggcac ctcgcgggcg tccttccatt ccagcagcag cacctcgtgg
     3241 cgcggcagca agcccagcac ggtgtcccgc atcagccagc cgaaatgccc cgacatcggc
     3301 gccaccacca gcaccgccgg ctcggggccg cgcaggggct tgcggtagtg gtgcagcagc
     3361 aggaaagggg tgtccaggac cacgcggtcc tcgacctcca acccggcgac ggccgttatg
     3421 cccaaggatg gcggttccat ccacaggata aggggccggg cgggcggggt ttcaagcgga
     3481 gggcgccccc acttgaacca gcggtcgagg atgcccttat gcaaggagag gtgtattcgc
     3541 catccgtcag gggaggttcc gccatgctgg tcaaaaccat actcaaggcc aaggcgcgcg
     3601 gcgccggcgt ggtcacggtg tcgcccgacg cctcggtggc cgaagcggcc aagctgctgg
     3661 cgaccaaccg catcggcgcc ctgatcgcgg tcgagcccga cggcgccatc gccggcattt
     3721 tgtcggaacg cgacatcgtg cgcggagtcg ccttgcaggg cgagctgtgc ctgcgggcca
     3781 tcgtgcgtga cctgatgacg gcggcggtgc tgacctgcca cgaggacgac accatcgaaa
     3841 gcctgatgca gaccatgacc gccaagcgcg tccgccacct gccggtgatc gacgcggact
     3901 cgaagctgat ggggatcgtg acgatcggcg acgtggtcaa gacccgcctg gacgaggcgt
     3961 ccatggaggt cgacaacctg cgccattacg tgtcggcgtc acggtagttc ccccctttcg
     4021 tcatccccgc gaaggcgggg atccatggaa gccgcgaaaa atgtccgcgg gacaatggat
     4081 gagacgaagc cggccggacc catggacccc cgctttcgcg ggggtgacgg gttagggttg
     4141 gcggaggcgg gccgccgttc tactccacca cgatgtcggc cgaggcctcg tggatttcgc
     4201 cgttgtcgtc gtggaacttc agcgtgatct tgccggattc ggtggcaagg gcatggaacg
     4261 agatgaaggg gttgccggac atggccgggt accagtccga gctgcacacc acgtcgttgt
     4321 tccaggtgca caccatcttg ttgatgatgc ggcgcggcag cactttgccg gaggcgtcct
     4381 tgcggttgcc ggattccatg tcgtgggtga cctgggcctt gatctcgatg atctcgccct
     4441 tggcggcctt cgacgggatg cgggtcttga tttgagcggg catggtgttc tctccgttcc
     4501 gtcgatcagc agccgccgat ggtgaccttg atttcctgct tggccatgta gaccgagccg
     4561 tcgctcatca ccgcataggc gcgcacggtc tgggtcttgc ccaggcgcat gcggaagctg
     4621 acctcggcct tgcccgagcg cggggtgagg tgccacgagg aaacgcccgg gttggggttg
     4681 ccgtcggcga tgacgtggat ggccttgacg tggtcggcgg cggtcatggg gctgtcgacg
     4741 acgacgctga ccggctcgtt ggcgccgctc tcggccacgt ccttcagctt caactggacc
     4801 ttgccttcct tgggcacggc gttgccgatc agcttcttgg cgaagtcgtc ggcttcctgc
     4861 ggggtggcgg cggcgccctt gggcagcacg gtggcggcga tcacgccggc gccggcggcg
     4921 gccaggaagc cgcggcgacc gatttccagt tcggacattg ttgctctccc tctcgatggc
     4981 agccctacgc ggcatgcctt ttgggtggga gcctatgcca gccgggcggg gcaagcaaca
     5041 tctacattag cttttattga acctctccct gtgcgtgggg agttgcgccc ggggccggca
     5101 tccgtcaaca tccgaccggt agctttgggg gtatgttgga tgaccattag gcggaaattc
     5161 ttcctggctt ttggactgat cctggcgacc agcattgccg gtctcgtcat caacggcgtg
     5221 atcgcgttgc ggcagttcaa gctgaccgag gacgtcgcgc gcgtctcggc ggtggtgtcg
     5281 gaagaacaga tccccttcat cgagaccacc aagaacctgc agctcgacat cgcccgcatc
     5341 cagggcctgt tcaccgacat
//
LOCUS       DATIKR010000172         3032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_159543, whole genome shotgun sequence.
ACCESSION   DATIKR010000172 DATIKR010000000
VERSION     DATIKR010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159543"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1993
                     /locus_tag="VLL76_02580"
     CDS             194..1993
                     /locus_tag="VLL76_02580"
                     /inference="COORDINATES: protein motif:HMM:NF026177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28407.1"
                     /translation="MHDFRVSRIFMMVTLVILVSDVAFLVANYAAARRSLELSMHQEA
                     EKLRSGFEVAISMTHTNMLQLARFVGSDPRVQQTVLAGRNAVEAEGGGPGGPRAAVAR
                     KALMDLVHARWNQMQQEFGVRQLHFHLAPGSLSFLRVHAPDKFGDRMDGLRRIITDVN
                     TDLKPRVGLETGRIYTGLRGVAPLMAVDPATGTEVHLGAVEVGSSFEPVVAALDKSLG
                     AGIAVLLKKEHVDGAMWQDFVRRYLPNEVTDCGCFVETTSRPDIYTFLKDDGFRAARN
                     QTITFPIKLDGKVFSVTRFPLTDYMASGDPAREPVGSVVLWTDDTEAFAAFERSQMFN
                     LVYGVFGFLLVEAGLWAALRMGAGKLRQELANRTAELSNANAELEKFASIISHDLQAP
                     LRMVVSYLTLIERKLGPGADADTKEFLQFAVDGGRRMSAMIRDLLAYSRVGRTQTDLV
                     PVDLGLVARTVLHDLDGAITETGAGVELADPLPTVKGMAGELTRLLANLVTNAVKYRS
                     PERPLKLRIACVRDGAKVRVEVSDNGIGIPEESRERVFEFFHRVGQQPDVDGTGIGLA
                     VARKVVEMHGGRIWVEPNPAGPGSVFKFTLPAA"
     gene            complement(1990..2421)
                     /locus_tag="VLL76_02585"
     CDS             complement(1990..2421)
                     /locus_tag="VLL76_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014851066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28408.1"
                     /translation="MTTRDGEGLARGLGWFSVALGAAELTAPGAICRALGMPGHERLV
                     QGYGVREIATGIALLRTGDPTPWIWGRVAGDALDLASLGAGTTRENAGRAVAAMGAVA
                     AVTALDIDCARRLARVGGTHPDYSDRSGFYAPPESMRGAGL"
     gene            complement(2418..>3032)
                     /locus_tag="VLL76_02590"
     CDS             complement(2418..>3032)
                     /locus_tag="VLL76_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011911384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV28409.1"
                     /translation="TDTVAIWGAGPVGQFCVRSAILLGAKQVVCIDNVPERLSMAAAG
                     GAIPIDFDDESVLDRLGELTKGKGPEKCIDAVGMEAHATRSLDSVYDRVKQAVMLETD
                     RPHVLREMIYVCRPAGIISVPGVYGGLIDKVPFGAAMNKGLTFRMGQTHVNRWTDDLL
                     HRIQMGQIDPSFVITHSVGLEEGPEYYKTFRDKLDGCIKVVLKP"
BASE COUNT          477 a         1031 c         1016 g          508 t
ORIGIN      
        1 ggttgggcga cggctgcggc gctccaggtc aggatggcaa gggccacggc ccccaaggac
       61 aggcgtgtca tccccaacga ataccgtggc aggcgtttcc ttcaaaccca ttacaatacg
      121 tttacatgta aggcatacga catttcaacc ggtgcgctat aatgggtcgg ttcggcaagg
      181 gtggggggcc tttgtgcacg atttccgcgt ttcccgcata ttcatgatgg tgaccttggt
      241 catcctggtc agcgacgtgg cgttcctggt ggcgaattat gccgccgccc gccggtcgct
      301 ggagttgtcg atgcaccagg aagccgagaa gctgcgctcg ggtttcgagg tcgccatctc
      361 gatgacccac accaacatgc tgcaactggc ccgcttcgtg ggcagcgacc cgcgcgtcca
      421 gcagaccgtg ctggccggcc gcaatgcagt cgaggccgaa ggcggcgggc cgggcggacc
      481 ccgcgccgcc gtcgcgcgca aggcgctgat ggacctggtg cacgcgcgct ggaaccagat
      541 gcagcaggaa ttcggcgtcc gccagcttca cttccacctt gcccccggct cgctcagctt
      601 cctgcgcgtt catgcgccgg acaagttcgg cgaccgtatg gacgggctgc gccgcatcat
      661 caccgacgtc aacaccgacc tgaagccgcg cgtcggcctg gagaccggcc gcatctacac
      721 cggcctgcgc ggggtggcgc ccctgatggc ggtcgatccc gccaccggca cggaggtcca
      781 tctgggcgcc gtcgaggtcg gcagctcgtt cgagccggtg gtggcggcgc tggacaagag
      841 cctgggggcc ggtatcgcgg tgctgctgaa gaaggagcat gtggacggcg ccatgtggca
      901 ggatttcgtg cgccgctacc tgcccaacga ggtgaccgat tgcggctgct tcgtcgagac
      961 cacgtcacgc cccgacatct acaccttcct caaggatgac ggcttccgcg ccgcccgcaa
     1021 ccaaaccatc acttttccga tcaagctgga tggcaaggtc ttctccgtca ctcgcttccc
     1081 gctgaccgac tacatggcga gcggcgatcc tgcgcgcgag ccggtgggat cggtggtgct
     1141 gtggaccgac gacaccgagg ccttcgccgc cttcgagcgc tcccagatgt tcaacctggt
     1201 ctatggcgtg ttcggcttcc tgctggtcga ggcggggctg tgggcggcgc tgcgcatggg
     1261 cgcgggcaag ctgcgccagg aactggcgaa ccgtaccgcc gagctgagca acgccaacgc
     1321 cgagctggag aagttcgcct ccatcatttc gcacgatctg caggcgccgc tgcgcatggt
     1381 ggtgtcctac ctgacgctga tcgaacggaa gcttggcccc ggcgccgatg ccgacaccaa
     1441 ggaattcctg caattcgcgg tcgatggcgg ccgccgcatg tcggcgatga tccgcgacct
     1501 gctggcctat tcgcgggtgg gccgcaccca gaccgatctg gtgccggtgg atttgggcct
     1561 ggtcgcacgc accgtcctgc acgatctgga cggcgccatc accgagaccg gcgccggggt
     1621 cgagctggcc gacccgctgc ccaccgtcaa gggcatggcc ggcgagttga cgcgcttgct
     1681 ggcgaatctg gtgaccaacg ccgtgaagta ccgctcgccg gaacgcccgc tgaagctgcg
     1741 catcgcctgc gtccgtgacg gcgccaaggt gcgggtcgag gtctccgaca acggcatcgg
     1801 catccccgag gaaagccgcg agcgggtgtt cgaattcttc caccgcgtcg gccagcagcc
     1861 cgacgtggac ggcaccggca tcggcctggc ggtggcgcgc aaggtggtcg agatgcatgg
     1921 cggccggatc tgggtcgaac ccaacccggc cggccccggc agcgtcttca agttcacgct
     1981 tcccgccgcc tagaggccgg ctccccgcat gctctcgggc ggagcataaa agccgctgcg
     2041 gtcgctgtaa tcggggtgtg tgccgccgac acgcgccagc cggcgggcgc agtcgatgtc
     2101 gagcgcggtg accgccgcga cggcacccat cgccgccacg gcgcggccgg cgttttcgcg
     2161 cgtcgtcccg gcccccaggg acgcgaggtc gagggcatcg ccggccaccc gcccccaaat
     2221 ccagggtgtc gggtcgccag tcctcagcag ggcgatgccg gtggcgatct cgcgcacgcc
     2281 gtagccttgc accagccgct cgtggccggg catccccaag gcgcggcaga tggcgcccgg
     2341 cgcggtcaac tctgccgctc ccaaggcgac cgagaaccat cccaggccac gagccagccc
     2401 ttctccgtcg cgcgtcgtca tggcttcagc accaccttga tgcagccgtc cagcttgtca
     2461 cggaaggtct tgtagtattc cggcccttct tccagcccga ccgagtgggt gatgacgaag
     2521 ctggggtcga tctggcccat ttggatgcgg tgcagcaaat cgtcggtcca ccggttgacg
     2581 tgggtctggc ccatgcggaa ggtgaggccc ttgttcatgg cggcgccgaa cggaaccttg
     2641 tcgatcagcc cgccatagac gcccgggacc gagatgatgc ccgccgggcg gcagacgtag
     2701 atcatctcgc gcagcacgtg ggggcggtcg gtctccagca tcaccgcctg cttgacgcgg
     2761 tcgtagaccg aatccaacga gcgggtggcg tgggcctcca tgccgacggc gtcgatgcat
     2821 ttctccggcc ccttgccctt ggtcagttcg cccaggcggt cgagcacgct ttcgtcgtcg
     2881 aaatcgatgg ggatggcgcc gcccgccgcc gccatgctca ggcgctcggg cacgttgtcg
     2941 atgcaaacga cctgcttggc gcccagaagg atggcgctac gcacgcagaa ctgccccacc
     3001 gggccggcgc cccagatggc gaccgtgtcg gt
//
LOCUS       DATIKR010000173         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_148016, whole genome shotgun sequence.
ACCESSION   DATIKR010000173 DATIKR010000000
VERSION     DATIKR010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148016"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..885
                     /gene="rlmJ"
                     /locus_tag="VLL76_02595"
     CDS             40..885
                     /gene="rlmJ"
                     /locus_tag="VLL76_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HSV28410.1"
                     /translation="MNYRHAYHAGNFADVVKHAVQALIIEHLKRKDGGFLYLDTHAGI
                     GAYDLASAQAEKTGEWRSGIGRLLAEDAPPAEILPYLDMVRGMNQGLAELRRYPGSPL
                     LAHALARPQDRLALCELHPEDNATLKRRFGADPRVGVHHMDGYAALKALLPPAERRGL
                     VLIDPPFEVKDEFERIRKGMAQAAKRWPTGLYAIWYPIKARAVIDRFHADLTMIGLPK
                     TLAAEVMTRAGDDPATLNGCGLVIVNPPWKLDESLATLLPWLAKVLAPDQGFHRLEWI
                     VEEKG"
     gene            complement(964..>2238)
                     /locus_tag="VLL76_02600"
     CDS             complement(964..>2238)
                     /locus_tag="VLL76_02600"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28411.1"
                     /translation="TEDRTIRTDIAIDIDGRTTLYDTTLEPMHDDQGRVIGVAAACMD
                     VTEIRDAKDALAAALNEAKRANLAKTRFLAAASHDLRQPMQSLVLLLTVLHEKLARQP
                     DVLRAVIAASAAAEAMRGLLDDLLDVARIDAGLVRSDPRPTAIGEMLARLAEEYRSRA
                     QAKGLDFRLRNCDGAAHTDAALLERILRNLLENALRYTESGGILLGCSRRGDVLRVAV
                     VDTGIGMTAEDCEAIFEEFVQLANPERDRTKGLGLGLAIVRRLATLLGHQVKVSSRPG
                     RGSRFYFDLPVSSHPYASLAPLPGATSLCGRVLVIDDERMVLDTLGTVLNGWGLEVVT
                     ADSAADGLAKLGGQAPDAILADYRLRGGDTGVQAIKEVEDTFGATIPALIITGDTSPQ
                     RLVEAEASGHQLLHKPVRNDELRRRVEAVLRH"
BASE COUNT          350 a          782 c          774 g          332 t
ORIGIN      
        1 gcccgatgca caatgccgcc gcccccatcc gagcgagcca tgaactaccg acacgcctac
       61 cacgccggca atttcgcgga cgtcgtcaag cacgccgtcc aggccctgat catcgagcac
      121 ctgaagcgca aggacggcgg attcctgtat ctcgacaccc atgccggcat cggcgcctac
      181 gacctggcca gcgcgcaggc cgagaagacc ggcgagtggc ggtcgggcat cggccgcctg
      241 ttggccgagg acgcgccgcc ggccgagatc ctgccttatc tcgacatggt gcggggcatg
      301 aaccaggggc tggccgaact gcgccgctat cccggctcgc cgctgctggc gcatgcgctg
      361 gcgcggccgc aggaccggct ggcgctgtgc gaactgcacc cggaagacaa cgccacgctg
      421 aagcgccgct tcggggccga cccgcgcgtc ggcgtccacc acatggacgg ctatgccgcg
      481 ctgaaggcgc tgctgccccc ggccgagcgg cgcggcctgg tgctgatcga cccgccgttc
      541 gaggtcaagg acgagttcga gcgcatcagg aagggcatgg cccaggccgc caagcgctgg
      601 cccaccggcc tgtatgccat ctggtatccg atcaaggcgc gcgcggtcat cgatcgcttc
      661 cacgccgacc tgaccatgat cggcctgccc aagaccctgg ccgccgaggt catgaccagg
      721 gccggcgacg acccggcgac gctgaacggc tgcggcctgg tgatcgtcaa cccgccatgg
      781 aagctggatg aatcgctggc gaccctgctg ccctggctgg ccaaggtgct tgcccccgac
      841 cagggcttcc accggctgga atggatcgtg gaagaaaaag gttagaggcg gcgggaaagc
      901 ccggcccgcc tcaactcgac ggcctgctca cggtcaagga gcacgggttg ccggctgcgc
      961 cggtcagtgt cgcagcaccg cctcgacgcg gcggcgcagt tcgtcgttgc gcaccggctt
     1021 gtgcagcaat tggtggccgc tggcttcggc ctcgaccagc cgttgcggcg aggtgtcgcc
     1081 ggtgatgatc agcgccggga tcgtggcgcc gaaggtgtcc tcgacctcct tgatcgcctg
     1141 cacgccggtg tcgccgccgc gcaggcggta atccgccagg atggcgtcgg gcgcctggcc
     1201 gcccagcttg gcgagaccat cggccgccga atcggcggtc accacctcga gtccccatcc
     1261 gttcagcacg gtgcccagcg tgtcgagcac catccgctcg tcgtcgatca ccagcacgcg
     1321 gccgcacagg ctggtcgcgc cgggcaacgg cgccagggag gcataggggt gggatgacac
     1381 cggcaggtcg aaatagaagc gcgagccccg gcccggccgc gacgacacct tgacctgatg
     1441 ccccagcagc gttgccagcc ggcgcacgat ggcgagccca aggccaagtc ccttggtgcg
     1501 gtcgcgctcg ggattggcca attgcacgaa ttcctcgaag atcgcttcgc aatcctcggc
     1561 cgtcatgcca atgccggtat cgaccaccgc cacccgcaac acgtcacccc gccggctgca
     1621 ccccagcagg atgccgccgc tttcggtgta gcgcagcgcg ttctccagca gattgcgcag
     1681 gatgcgttcc agcagggcag cgtcggtgtg ggcggcgccg tcgcaattgc gcaggcggaa
     1741 gtccaggccc ttggcctggg cgcgcgaccg gtattcctcg gccaggcggg ccagcatctc
     1801 gccgatggcg gtggggcggg gatcgctgcg caccaaaccg gcgtcgatgc gcgccacgtc
     1861 cagcagatcg tcgagcagcc cgcgcatggc ctcggcggcg gcggaggcgg cgatgacggc
     1921 ccgtagcacg tcgggctgcc gcgccagctt ctcgtgcagc acggtcagca gcagaaccag
     1981 cgactgcatg ggctggcgca gatcgtggct ggcggccgcc agaaagcggg tcttggccag
     2041 attggcgcgc ttggcctcgt tgagcgccgc cgccaaggcg tccttggcgt cacggatctc
     2101 ggtgacgtcc atgcaggcgg cagccacgcc gatcacccgc ccctggtcgt catgcatggg
     2161 ttccagggtg gtgtcgtaca gcgtggtgcg gccgtcgatg tcgatggcga tgtcggtgcg
     2221 gatggtccgg tcctcggt
//
LOCUS       DATIKR010000174         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_208310, whole genome shotgun sequence.
ACCESSION   DATIKR010000174 DATIKR010000000
VERSION     DATIKR010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208310"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..779
                     /locus_tag="VLL76_02605"
     CDS             324..779
                     /locus_tag="VLL76_02605"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV28412.1"
                     /translation="MRFQLGDYVPYLLSRAGITLSHNFSRELDRFGVTLPMWRVMSAL
                     LDEGEQRLGDLARITAIELSTLSRIAAAMEAKALVTRRRSGQDARAVLIALSGEGRRT
                     AESIVPHALHYETNAVAGMSDEEVQTLKGLLQRLYGNVAGDLEVKPQRV"
     gene            complement(828..>2026)
                     /locus_tag="VLL76_02610"
     CDS             complement(828..>2026)
                     /locus_tag="VLL76_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28413.1"
                     /translation="SNAIRLTLAALLATAVLVGVVVVLVRQMEREQRHAAALRRSEER
                     LHFAQFALDHAADMVFWADRDAQILYANAAASDRLGYRPDEIATLSIAQIDPEFTPAM
                     WTDLLSELSQSRSKRFETTHRTRDGATYPAEVSVNYVEFNGAGYVCGFVRDITERRRA
                     EAALAEKTASLEASNAELEQFAYVASHDLREPLRMVNSFVTLLARRFADKLDDEGREY
                     IGFAQEGAVRMDRLILDLLEYSRVGRLDRPFAPLPLARAAEVAVKALGVAADEAGATI
                     EIAPDLPEVLGNEEELVRLYQNLVGNALKYRHLDRPAKVSLGAEWRGGELMCWVADNG
                     IGIAPQYYERVFRIFQRLHGRDRYDGTGIGLAICKKIVERHGGRIWVESVPDQGSTFF
                     FTLKGA"
BASE COUNT          332 a          664 c          706 g          324 t
ORIGIN      
        1 aaatagaacg gcggctcgcg gttggggtcg ccgcccattt cgcgcgcgtg gccggcatag
       61 ttgcgcgcca cgcagaagat acgccggacg ggatagaccg cgtcctcgtt ggcgaccggg
      121 atggcggggc gcggaatgtc gaacaacgca cggctcatgg caggcctctc gaatgaagac
      181 ggcccaggat gcaccagccc ggcgccgagg aggcgtgaac gtttggcata ggcacaatgt
      241 gcttgactgc caccggcggt gtgaaaatga tggaagatac aaaaatacgt cccaaaagag
      301 gacgggcagg gaggaggttt ccggtgagat tccagctcgg ggactatgtc ccctatctac
      361 taagccgtgc gggcatcacg ctttcgcaca acttttcccg cgagctcgac cggttcgggg
      421 tgacgttgcc gatgtggcgg gtcatgtccg cgctgctcga cgagggggaa cagcgcctcg
      481 gcgatctggc ccgcatcacc gccatcgagt tgtcgacgtt gtcgcgcatc gccgcggcca
      541 tggaggccaa ggcgctggtg acccgccgcc gctcgggcca ggacgcccgc gcggtgctga
      601 tcgcgttgtc cggcgagggc cgccgcaccg ccgagagcat cgtgccgcat gcgctgcact
      661 acgagaccaa cgccgtggcc ggcatgagcg acgaagaggt gcagaccctc aagggcctgc
      721 tccagcgtct ctacggcaac gtcgcgggcg acctcgaggt caagccgcaa cgcgtgtgac
      781 ggtcgggtca gggggagccg gggtgcccgc aagggctcgc ccggccttca cgcgcccttc
      841 agcgtgaaga agaacgtgct gccctggtcg ggcaccgatt ccacccagat acggccgcca
      901 tggcgttcga cgatcttctt gcagatggcc aagccgatgc cggtgccgtc gtaacggtcg
      961 cggccgtgca ggcgctggaa gatgcggaag acgcgctcgt aatattgcgg cgcgatgccg
     1021 atgccgttgt cggcaaccca gcacatcagc tcgccgccac gccattcggc ccccaacgac
     1081 accttggccg ggcggtcgag gtggcggtat ttcagcgcgt tgccgaccag gttctggtac
     1141 agccgcacca gctcctcctc gttgcccagc acctcgggca ggtcgggggc gatctcgatt
     1201 gtggcgccgg cttcgtcggc ggccacgccc agggccttga ccgccacctc ggcggctcgg
     1261 gccaggggca gcggcgcgaa cgggcggtcg agccggccga cgcgggaata ttccagcagg
     1321 tccaggatca accggtccat gcgcacggcg ccttcctggg cgaagccgat atactcgcgc
     1381 ccctcgtcgt ccagcttgtc ggcgaagcgc cgcgccagca gggtcacgaa gctgttgacc
     1441 atgcgcagcg gctcgcgcag gtcgtgcgac gccacatagg cgaattgctc gagttcggcg
     1501 ttcgaggctt ccaggctggc cgtcttctcg gccaacgccg cctcggcgcg cctacgctcg
     1561 gtgatgtcgc gcacgaagcc gcagacatag ccggccccgt tgaactcgac gtaattgacc
     1621 gacacctcgg cgggataggt ggcgccgtcg cgggtgcggt gggtggtttc gaaccgcttc
     1681 gagcggctct ggctcagctc actcagcagg tcggtccaca tcgcgggggt gaattccgga
     1741 tcgatctggg cgatggacag cgtggcgatc tcatccggcc ggtaccccag gcgatcgctt
     1801 gccgccgcgt tggcgtacag gatttgggcg tcgcggtcgg cccagaacac catgtcggcg
     1861 gcatggtcga gggcgaattg ggcgaagtgc aggcgctcct cgctgcgccg cagggcggcg
     1921 gcgtgccgct gttcgcgttc catctgccgc accagcacga ccaccacccc caccagcacg
     1981 gcggtcgcca gcagggcggc cagggtcagc cggatggcgt tgctgc
//
LOCUS       DATIKR010000175         5012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_50820, whole genome shotgun sequence.
ACCESSION   DATIKR010000175 DATIKR010000000
VERSION     DATIKR010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5012
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50820"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VLL76_02615"
     CDS             <1..569
                     /locus_tag="VLL76_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV28414.1"
                     /translation="GAGAEVAAYGDRLKKTWVWDELYRVRNIRPSFHKGLWLGIAYSA
                     LDTYLFGGKAPWTFKNHADHTALKKASECPKIAYPKPDGKISFDKLSSVFISNTNHEE
                     DQPAHLKLKDPGVPVAVNLALYDAPEQRYCPAGVYEIVRDDDGSNPRLQINAQNCVHC
                     KTCDIKDPTQNINWVVPEGGGGPNYPNM"
     gene            607..2331
                     /locus_tag="VLL76_02620"
     CDS             607..2331
                     /locus_tag="VLL76_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28415.1"
                     /translation="MASWCKKAGGGLAALAVTAVLVAGCQPRAGNDDAARKAAAEHRG
                     QTTALTAFLAGRFAHQQGDTRAAAEYYAQALKHDPDNVELLGRAFTLMVAEGRFDDAV
                     PLAHRLLAFDADSPIPLLVAGVADARDGRFAQAEARFAALPKRGFNVFLSPLLAAWCR
                     AGEGKTDAAMDLLKPLAEAKGLEPLHAFHAGLINDIGGRTEAAEGHYVAALDSALAIR
                     TIEAAGSFYQRTGRIEKARSLYQGYESEHPDTMLFDGAALLKAGAGVPRAVPDAKAGI
                     AQALFDAASMMRQGNALDVSLLFSRLTLALDPNFTLARMTVGDILSQQERLAEANSVY
                     SGIDRSSAAHDYARLRVAMNLEDMGDVEGALAALDALAKDRPQSIDALTTKGDVLRKH
                     KRFEEAAAAYQAAFTRLGPPQERHWLLHFSRGIAYERSGQWPKAEADFARALELKPDQ
                     PDVLNYLGYSWVDRGERLEEGRKMIEKAVELRPKDGAIVDSLGWALYRMGDFQGAVKQ
                     LERAIELKPEDPTINDHLGDAYWQVGRTAEAMFQWQRAMTLDPEPEQIAPLKEKIRTG
                     EVPAQPVK"
     gene            2437..3294
                     /locus_tag="VLL76_02625"
     CDS             2437..3294
                     /locus_tag="VLL76_02625"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HSV28416.1"
                     /translation="MTIEIFAPAKVNLYLHVVGKRADGYHLLDSLIAFAGVGDSLTCA
                     PADSVTLTVDGPTAPLLPPDGDNIVLKAARALAAKAGVTAAARLHLTKRLPVAAGIGG
                     GSADAAAALKGLSALWGVTLAEAELRELALAIGADVPVCVAGRAMAVSGIGERMVPAP
                     ALPSCWLVLVNPMEPLSTPAVFKARTGCFSEHAPLETTPKDAAALAALLNARRNDLTE
                     AAVSLVPAVGDALSLISEQSGCLLARMSGSGATCFGLFATEAEARAAEAAIAAARPGW
                     WAAAAELLS"
     gene            3291..4199
                     /locus_tag="VLL76_02630"
     CDS             3291..4199
                     /locus_tag="VLL76_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV28417.1"
                     /translation="MTELTGYLAAEGFEADLRAELGDVVEEHGRLMLAPGPERPAAWA
                     QNVWRDPVRIPIQSIGDGAKALRAIQRNWWPYAPGLHRRTKLMVEKLPKVSAKPQVFG
                     QPAPTAPLGSFTLLDEYTLLASADCSSPFPNGEVHFVEDKATPPNRAYLKLWETFTRL
                     GVHPGPGELCLDLGACPGGWTWVLASLGARVISIDKAPLDPKIAAMPGVSIRQESAFG
                     LEPASVGQVDWLFSDVICYPERLLRLVERWRAAGLARNFVCTVKFQAETDFATLAAFT
                     AIPGSRAFHLFHNKHELTWVLLDGGK"
     gene            4284..>5012
                     /locus_tag="VLL76_02635"
     CDS             4284..>5012
                     /locus_tag="VLL76_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28418.1"
                     /translation="MGVPTLPPPVDIDGDTKKAIIDGLKKVLARFQEKGLVDSALTYQ
                     DLISNPEILEHFIGTFVANRDICDDIVKDSDGKPVRDDDARLACPVSLNQIQQLLVRT
                     CAKKVMEQEKTVSTVTETVTKKSFLGLIKRTEEVQRETTDPVEERKIRELTRYMAFGW
                     QLPLLDAYRRHLSYQQIMEIGDDLVALQSVANIEALSQFDPLMLRKVKQAAGEDFAGI
                     LADRPQAIAGVAVWNRDMYEFYRKL"
BASE COUNT          814 a         1775 c         1652 g          771 t
ORIGIN      
        1 agggcgcggg tgccgaggtg gccgcctatg gcgaccgcct gaagaagacc tgggtgtggg
       61 acgagctgta ccgcgtccgc aacatccgcc ccagcttcca caagggcctg tggctgggca
      121 tcgcctattc ggcgctggac acctatctgt tcggcggcaa ggcgccgtgg accttcaaga
      181 accacgccga ccacaccgcg ctgaaaaaag cgtcggaatg cccgaagatc gcctatccga
      241 aaccggatgg taagatcagc ttcgataagc tgtcgtcggt gttcatctcg aacaccaacc
      301 acgaggagga ccagccggcc cacctgaagc tgaaggaccc gggcgttccg gtcgccgtca
      361 atctggcgct gtacgatgcg ccggagcagc gctattgtcc ggccggtgtc tacgaaatcg
      421 tgcgcgacga cgacggaagc aacccgcgcc tccagatcaa cgcgcagaac tgcgtccact
      481 gcaagacctg cgacatcaag gaccccaccc agaacatcaa ctgggtcgtc cctgaaggcg
      541 gcggcggacc gaattatccc aacatgtaag gggcgcgcgg gccgccccgg gtgagaacgg
      601 gtgaccatgg cgagttggtg caagaaggcc ggcggcggat tggcggcgct ggccgtcacg
      661 gcggttctgg tggcggggtg tcagccccgc gccggcaacg acgacgcggc gcgcaaggcg
      721 gcggccgagc atcgcggtca gacgacggcg ctgaccgcct tcctggccgg ccgcttcgcc
      781 caccagcagg gcgacacccg cgccgccgcc gaatattacg cccaggcgct gaagcatgac
      841 cccgacaacg tcgagctgtt gggccgcgcc ttcaccctga tggtggccga gggccgcttc
      901 gacgacgcgg tgccgctggc ccatcgcttg ctggcgtttg acgccgattc gcccatcccg
      961 ctgctggtcg ccggtgtcgc cgatgcccgc gacggccgct tcgcccaagc cgaggcgcgc
     1021 ttcgccgccc tgcccaagcg cggcttcaac gtcttcctca gcccgttgct ggcggcgtgg
     1081 tgccgggccg gcgagggcaa gaccgacgcc gccatggatc tgctgaagcc gctggccgag
     1141 gccaaggggc tggagccgct gcacgctttc cacgccggcc tgatcaacga catcggcggc
     1201 cgcaccgagg cggccgaggg ccattacgtg gcggcgctgg attccgcttt ggccatccgc
     1261 accatcgagg ccgccggcag cttctatcag cgcaccggcc gcatcgagaa ggcccgcagc
     1321 ctgtaccagg gctacgaaag cgagcacccc gacaccatgc tgttcgacgg cgccgccttg
     1381 ctgaaggccg gagccggcgt gccgcgcgcg gtgcccgacg ccaaggccgg catcgcccag
     1441 gcgctgttcg acgccgcctc gatgatgcgc cagggcaacg cgctggacgt gtcgctgctg
     1501 ttctcgcgcc tgaccctggc gctggatccc aatttcaccc tggcccgcat gaccgtcggc
     1561 gacatcctgt cgcagcagga gcgcctggcc gaggccaaca gcgtctattc cggcatcgac
     1621 cgctcgtcgg cggcccacga ttacgcccgc ctgcgcgtgg ccatgaacct ggaagacatg
     1681 ggcgacgtcg agggcgcgct ggcggcgctg gacgcgctgg ccaaggaccg cccgcaatcg
     1741 atcgacgccc tgaccaccaa gggcgacgtg ctgcgcaagc acaagcgctt cgaggaagct
     1801 gccgccgcct accaggccgc cttcacccgc ctggggccgc cgcaggagcg ccactggctg
     1861 ctgcatttca gccgcggcat cgcctatgag cgctcgggcc agtggcccaa ggccgaggcc
     1921 gacttcgccc gcgcgctgga actgaagccg gaccagcccg acgtgctcaa ctatcttggc
     1981 tattcctggg tcgatcgcgg cgagcgcctg gaagagggcc gcaagatgat cgagaaggcg
     2041 gtggaactgc gccccaagga cggcgccatc gtcgattccc tgggctgggc gctgtaccgc
     2101 atgggcgact tccagggcgc ggtcaagcag ttggagcgcg ccatcgagct gaagcccgag
     2161 gaccccacca tcaacgacca cctgggcgac gcctattggc aggtcggccg caccgccgag
     2221 gccatgttcc aatggcagcg cgccatgacc ctggaccccg aaccggaaca gatcgccccg
     2281 ctgaaggaaa agatccgcac cggcgaggtt ccggcgcagc cggtcaagtg acccatttgt
     2341 cgtcaccccc gcgaaggcgg gggtccatgt cgtacgcctg accggtgccc accatccctg
     2401 gatccccgcc ttcgcgggga tgacgggtgt ttagaaatga ccatcgaaat cttcgccccc
     2461 gccaaggtca acctgtacct gcacgtcgtc ggcaagcgag ccgacggcta tcacctgctg
     2521 gacagcctga tcgccttcgc tggcgtgggc gacagcctga cctgcgcgcc ggccgattcc
     2581 gtgacgctga cggtggacgg ccccaccgcg ccgctgctgc cccccgacgg cgacaacatc
     2641 gtgctgaagg ccgcccgcgc cctggcggcc aaggccggcg tgacggcagc ggcgcggctg
     2701 cacctgacca agcgcctgcc ggtggccgcc ggcatcggcg gcggttcggc cgacgccgcc
     2761 gccgcgctca agggcctgtc cgcgctgtgg ggcgtcaccc tggccgaggc cgagttgcgc
     2821 gagctggctt tggccatcgg cgccgacgtg ccggtctgcg tcgccggccg cgccatggcg
     2881 gtgtcgggca tcggcgagcg catggttccc gcccccgctt tgccgtcttg ctggctggtg
     2941 ctggtcaacc ccatggagcc gctgtccact ccggcggtgt tcaaggcccg caccggctgc
     3001 ttctcggaac acgcgccgct ggagaccacg cccaaggatg ccgccgccct ggccgccctg
     3061 ctgaacgcgc ggcgcaacga cctgaccgag gcggcggtgt cgctggtgcc ggcggtgggc
     3121 gacgcgctgt cccttatttc tgagcaatcc ggctgcctgc tcgcccgcat gtccggttcc
     3181 ggcgccacct gtttcggcct gttcgccacc gaggccgagg cccgcgcggc cgaagccgcc
     3241 atcgccgccg cccgtcccgg ctggtgggct gcggcggcgg agttgctgtc atgaccgagc
     3301 ttaccggata cctggccgcc gagggcttcg aggccgacct gcgcgccgaa ctgggcgacg
     3361 tggtcgagga gcacggccgg ctgatgctgg cgcccggccc cgagcggccc gccgcctggg
     3421 cgcagaacgt gtggcgcgac cccgtgcgca tccccatcca gtccatcggc gacggcgcca
     3481 aggcgttgcg ggccatccag cgcaactggt ggccctatgc ccccggcctg caccgccgca
     3541 ccaagctgat ggtggagaag ctgcccaagg tgtcggccaa gccgcaggtg ttcggccagc
     3601 cggcgccgac ggcgccgctg gggtcgttca ccctgctgga cgaatacacc ctgctggcct
     3661 cggccgattg ctccagcccg ttccccaacg gcgaggtcca tttcgtcgag gacaaggcga
     3721 cgccgcccaa ccgcgcctat ctcaagctgt gggagacctt cacccggctg ggcgtgcatc
     3781 ccggccccgg cgagttgtgc ctggacctgg gtgcctgtcc gggcggctgg acctgggtgc
     3841 tggcgtcgct cggcgcccgt gtcatcagca tcgacaaggc gccgctcgac cccaagatcg
     3901 ccgccatgcc gggcgtgtcg atccgtcagg aaagcgcctt cggactggaa ccagccagcg
     3961 tcgggcaggt ggattggctg ttctcggacg tcatctgcta tcccgagcgc ctgctgcggc
     4021 tggtcgagcg ctggcgcgcc gccgggctgg cccgcaactt cgtgtgcacc gtcaagttcc
     4081 aggccgagac cgatttcgcc accctggcgg cgttcaccgc cattcccggc tcgcgcgcgt
     4141 tccacctgtt ccacaacaag cacgagctga cctgggtgct gctggacggc ggaaagtagc
     4201 gccccaacct cggtcggtgt tgccacgtcc cgttcgtcag agtaaacctt atgccgtctt
     4261 ggaacaggtc tggaacctta gtcatgggcg tgcctaccct tccgcccccg gtggatatcg
     4321 acggcgacac caagaaggcc atcatcgacg gcctcaagaa agtgcttgcc cgtttccagg
     4381 aaaaagggct ggtcgattcc gctctgacct accaggacct gatttccaat cccgagattc
     4441 ttgagcattt catcggcacc ttcgtcgcca accgcgacat ctgcgacgac atcgtcaagg
     4501 attccgacgg caagccggtg cgcgacgacg atgcccgcct ggcctgcccg gtgtcgctga
     4561 accagattca gcaattgctg gtgcggacct gcgccaagaa ggtgatggag caggaaaaga
     4621 ccgtttccac cgtcaccgag acggtgacca agaaaagctt cctgggcctg atcaagcgca
     4681 ccgaggaagt ccagcgcgag accaccgatc cggtggagga acgcaagatc cgcgagctga
     4741 cccgctacat ggcgttcggc tggcaattgc cgctgctcga cgcctatcgc cgccacctgt
     4801 cctatcagca gatcatggaa atcggcgacg atctggtggc gctgcaatcg gtcgccaaca
     4861 tcgaggcgct gagccagttc gaccccttga tgctgcgcaa ggtcaagcag gcggcgggcg
     4921 aggacttcgc cggcatcctg gccgaccggc cccaggccat cgccggcgtc gcggtgtgga
     4981 accgtgacat gtacgagttc tatcgcaagc tg
//
LOCUS       DATIKR010000176         1975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_87291, whole genome shotgun sequence.
ACCESSION   DATIKR010000176 DATIKR010000000
VERSION     DATIKR010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87291"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /locus_tag="VLL76_02640"
     CDS             <1..763
                     /locus_tag="VLL76_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28419.1"
                     /translation="WHMSMTHFFTTYLYNPMVVGLTRRRAAKGLGTSPKDLSRPGAFV
                     MVTALPTLATMVVMGMWHGNNVMFALFGLLHGVYLVLNRGWRAVQKRYGFKWGKSRPA
                     FLASWLLTFLAVTAAWAVFRSPDLAAAAKVVPALFGANGFYLPESYGLRLGAVAQVLT
                     ALGIRFEAPVDILIYPSVAHLWKLAVLVGVALALPNSQQWLARFAPALNPVASAPRRQ
                     WSPGLSTGMLTAVVFVICLVLVHVNQQSSFIYFQF"
     gene            723..1667
                     /locus_tag="VLL76_02645"
     CDS             723..1667
                     /locus_tag="VLL76_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28420.1"
                     /translation="MSISKAASSTSSSRRFALGFAVTVAALLVTAAVATELLVRRQIE
                     PHHNYLKYLRLFKSTQARDAAFGSSITVGGFTGQPGFVNMGFGGEPLNFIVHKLKMFY
                     ADRKPGRVILQGSFMEFSDSFWTQLNRDNTDEFESMMSADDPTRLRILNPMHRASLLL
                     YWRTMLADGGFEPSAKFQPDGSRLNSERYSDQPADVRAMAARQTARSWRLPQNPEKSP
                     AATVMADAIRHVRAKGGEVCIVSYPVTASLYRELLKSPNFDRIPAALAHIADTEGARY
                     VNMLDHGMPDEYFVDDVHINGDGARAISPEIVSRCFGS"
     gene            1683..>1975
                     /locus_tag="VLL76_02650"
     CDS             1683..>1975
                     /locus_tag="VLL76_02650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28421.1"
                     /translation="MTTPLLVSLAANALLAICCGVLAIRYQVLGKVVAMFRKGRTPLA
                     AASRGQVRDSMFAVFKVPAAPVVFMGDSLAEDGDWFELTGNAQYINRGVGGEEV"
BASE COUNT          289 a          674 c          638 g          374 t
ORIGIN      
        1 ctggcacatg tcgatgaccc atttcttcac cacgtacctc tacaatccga tggtcgtggg
       61 cttgaccagg cggcgtgccg ccaaggggct ggggacgtcg cccaaggacc tgtcgcggcc
      121 gggcgcgttc gtgatggtca ccgcgctgcc gaccttggcc accatggtgg tgatgggcat
      181 gtggcacggc aacaacgtca tgttcgccct gttcggcctg ctgcacggcg tctatctggt
      241 gctgaaccgc ggttggcgcg ccgtccagaa gcggtatggc ttcaaatggg gcaagtcgcg
      301 tccggcgttc ctcgccagct ggctgttgac cttcctcgcc gtgaccgccg cctgggcggt
      361 gttccgctcg cctgacctgg cggcggcggc caaggtcgtc ccggcgctgt tcggggccaa
      421 cggattctat ctgcccgaga gctacggcct gcgcctgggc gcggtggctc aggtgctgac
      481 ggcgttggga attcgcttcg aggcgccggt cgacatcctg atctatccgt cggtggccca
      541 tctgtggaag ctggcggtgc ttgtgggggt ggcgctggcg ctgccgaatt cgcaacaatg
      601 gctggcccgt ttcgcccccg ccttgaaccc ggtggcgtcc gcgccgcgcc ggcagtggtc
      661 gcccggtctg tcgaccggca tgctgaccgc cgtcgtcttc gtcatttgcc tggtgctcgt
      721 ccatgtcaat cagcaaagca gcttcatcta cttccagttc taggcgcttt gccctgggct
      781 tcgcggtcac ggttgcggcg ctgctggtga ccgccgccgt cgccacggaa ctcctggtcc
      841 ggcgacagat cgagccccac cacaattatc tcaagtacct gcgcctgttc aaatcgacgc
      901 aggcgcgcga tgccgccttc ggttcgtcga tcacggtggg cgggttcacc ggccagcccg
      961 ggttcgtcaa catgggcttc ggcggcgagc cgctgaactt catcgtgcac aagctcaaga
     1021 tgttctacgc cgaccgcaag ccggggcgcg tgatcctgca agggtcgttc atggagttca
     1081 gcgacagctt ctggacccag ctcaaccgcg acaacaccga cgaattcgaa tcgatgatgt
     1141 ccgccgacga cccgacccgg cttcgcatcc tcaaccccat gcaccgggcg tcgctgctgc
     1201 tgtattggcg gacgatgctg gccgatggcg gcttcgagcc cagcgccaag ttccagccgg
     1261 acggctcccg cctcaacagc gagcgctatt cggaccagcc ggccgacgtc cgcgcgatgg
     1321 cggcgcggca gacggcacgg tcgtggcggc tgccccagaa ccccgagaaa tccccggcgg
     1381 caacggtgat ggccgacgcc atccgtcatg tgcgggccaa gggcggcgag gtctgcatcg
     1441 tctcgtatcc cgtcaccgcc agcctgtacc gggagctgct gaagtcgccc aatttcgacc
     1501 gcatcccggc cgcgctggcg catatcgccg acaccgaggg cgcgcgctac gtcaacatgc
     1561 tggatcacgg catgcccgac gagtatttcg tcgacgacgt ccacatcaac ggcgacggcg
     1621 cccgcgccat cagccccgag atcgtctcgc gctgcttcgg ctcttgaatg ggagacgctt
     1681 tcgtgaccac cccgctgctc gtatcgctcg ccgccaacgc cctgctcgcc atctgctgcg
     1741 gcgtcctggc catccgttac caggtgctcg ggaaggtcgt cgcgatgttc cgcaagggcc
     1801 ggacgccgct ggcggcggct tctcgcggcc aggtgcgcga ctccatgttc gccgtcttca
     1861 aggttcccgc cgcgccggtg gtgttcatgg gcgattccct ggccgaggac ggcgattggt
     1921 tcgaactgac cggcaacgcc cagtacatca atcgcggggt cggcggcgag gaagt
//
LOCUS       DATIKR010000177         3915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_75497, whole genome shotgun sequence.
ACCESSION   DATIKR010000177 DATIKR010000000
VERSION     DATIKR010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3915
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75497"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /locus_tag="VLL76_02655"
     CDS             complement(<1..1337)
                     /locus_tag="VLL76_02655"
                     /inference="COORDINATES: protein motif:HMM:NF024353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /protein_id="HSV28422.1"
                     /translation="MKTKPQPPANPVRAWRLPFPTLCATLAAITLVHASPLAAQGAVW
                     TGGVGEWNDSAQWDGGVVPGETTNVFLPAAAVVSYNLPMAAASIGGLTNWGLLSINTS
                     GFNCAAVVLNRVGGGGLLTVNSGGVLAITGALGICSNNAVTIQPGASLTASAAVHIGS
                     NPFGVVGGATIGAFGRMTNNGGVITTATTTFNPNNQSLAAGNHALLVINGGVNNLGSV
                     DIHRSGGTAQAALGTEGLMIYGGLVNMTSLRLGNNNFASMLVSPGAIVTNTGNGTIRN
                     TTAGRPSRLLQTGGLYVTLGTQTMTVSTGTGAGTTYSITGGTNLMGGLRFGDTATAAN
                     PGTANFTNAAAIYIGLQGIANSGAAVVNARLNPGGLFGALADWTGSSPMILGAGDFTF
                     RAASLDGTPHNITLDGVLSGIGPLVKTGGGTLTMSAAHTYTGPTLINEGTLALG"
     gene            complement(1501..3894)
                     /locus_tag="VLL76_02660"
     CDS             complement(1501..3894)
                     /locus_tag="VLL76_02660"
                     /inference="COORDINATES: protein motif:HMM:NF028442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HSV28423.1"
                     /translation="MTTGTGWCFGGPKVTDEEANALLVRRQWSVSSGGTLTNLLDRAQ
                     TQALMAFGPDGRKADLLDRIAPDGAVNWTAPAGEWTVYALSQRPSGTKVERAAPGGEG
                     WMINLAHAPAMSNFLRWMDAAFANYQGAMPRAQYHDSYEYHMDWSPSLLAEFERRRGY
                     RLQDHLDAFLTGQPADRAARVKCDYRETISDIMAEVTLPMWSRWARDRGFLTRNQAHG
                     SPGNWLDLYAVADIPETEMFHRDRNRLISKFASSAAHVTGRRLVSAETGTWLREHFTE
                     TLADMKYLVDDLFLSGVNHVFYHGACYSPDEVPWPGWVFYASTQMNSRNPIWRDTDAL
                     NAYITRCQSVLQAGQPDNDILLYWPIHDLWSRPDGMTLNLNIHRRAWFEEQPIGKLAQ
                     KLWNAGYQFNYVSGRQLAAAKVENGKITTPGGVYRIVVVPQTRVISAETLRALDRLAE
                     TGATVVFQGETPEDVAGLGDLDAKRQSLQFLARSGIGNPVEPGANRRSRHGKGELVVW
                     KHGELSSLTGVPRETLFDIPGLMCIRRKLDDGRYYFIANRGEQTVDGWVPLATAARSV
                     VILDPLSGRAGMAAIRRSAANQTEVRLQLPPGASVILRILDTRAVEGPAFPLWEPAGE
                     SRTLGGNWQVRFLAGGPELPAAFATRRLASWTELGDTNQTQRFGGTAAYTLAFDAPGG
                     QPPPRAATWQLDLGRVFQSARVTVNGRSHGTLITPPFRVVVDNLKPAGNVLEIEVTST
                     AANRIRDLDRRGVQWQNFHDINFVNIDYRPFNAADWPLADAGLLGPVTLTPVQLREP"
BASE COUNT          610 a         1132 c         1473 g          700 t
ORIGIN      
        1 ccaagagcga gcgttccctc gttgatcagc gtcggaccgg tgtaggtgtg cgccgcgctc
       61 atggtgagcg tgccgccgcc ggtcttgacc agcgggccga tgccgctcag gacgccgtcg
      121 agcgtgatat tgtggggcgt gccatcaagc gaggcggcgc ggaaggtgaa gtcgcccgcg
      181 ccgagaatca tcgggctgga gccggtccaa tcggccaagg cgccgaacag gccgccgggg
      241 ttgaggcggg cattgacgac ggcggcgccg ctgttggcta tgccctgcag cccgatatag
      301 atggcggcgg cgttggtgaa gttggccgtg cctggattgg ccgccgtcgc ggtatcgccg
      361 aaccgcaggc cgcccatgag gttggtgccg ccggtgatgg aatacgtcgt gcccgcgccg
      421 gtcccggtgg agacggtcat ggtctgggtg ccgagggtga cgtaaaggcc gcctgtttga
      481 agcaggcgcg aggggcggcc ggcggtggta ttgcggatgg tgccgttgcc ggtgttggtg
      541 acgatggcac ccggggagac gagcatgctg gcgaagttgt tgtttcccaa gcgcagcgag
      601 gtcatgttga ccaagccgcc gtaaatcatc aggccctcgg tgccaagcgc ggcttgggcg
      661 gtgccgccgg agcgatggat gtccaccgaa ccgagattgt tgacgccgcc gttgatgacc
      721 agcagggcat ggttcccggc ggcgagggac tggttgttgg gattgaacgt ggttgtggcg
      781 gtggtgatca cgccgccgtt gttggtcatc ctgccgaagg cgccgatggt ggcaccgccg
      841 acgacgccaa atgggttgga gccgatgtgg acggccgcgc tggcggtgag gctggcgcct
      901 ggctggatgg tgacggcgtt gttcgagcag atgcccagcg cgcccgtgat cgcgagcacg
      961 ccgccgctat tgaccgtcag cagaccgccg ccgccgaccc ggttcaggac gacggccgcg
     1021 cagttgaagc cgctggtgtt gatggagagc agcccccagt tggtcaggcc gccaatggac
     1081 gccgccgcca tcggcagatt gtagctcacc accgcagcgg ccgggaggaa aacattggtg
     1141 gtttcgccgg gaacgactcc cccatcccat tgagcgctgt cgttccattc gccgacgccg
     1201 ccggtccaga cggccccttg ggccgccagc ggactggcat gaacgagcgt gattgccgcg
     1261 agtgtcgcac agagggttgg gaacggcagg cgccaggccc ggaccggatt ggctgggggt
     1321 tgcggtttgg tcttcattgc atggagttca gatgatttga gcaaattgcg agcgcacaac
     1381 acaaagccag cgggcttggc gcggggggcg ctgttgtgtt gcgccaatat aagcgcgccg
     1441 gcgggagaaa tggaacaggc ttcttgtgca aatcacattg acaatacggc actggcgggg
     1501 tcacggctcc cgcagctgga ccggcgtcag ggtcacgggg ccgagcaggc cggcgtcggc
     1561 cagcggccag tcggctgcgt tgaagggccg gtagtcaatg ttgacgaagt tgatgtcgtg
     1621 gaagttctgc cactggacgc cgcgccggtc caaatcgcgg atgcggttgg cggcggtgct
     1681 ggtgacctcg atttcgagca cgttgccggc gggcttgagg ttgtccacca ccacgcgaaa
     1741 cggcggggtg atgagtgtgc cgtggctcct gccattgacc gtgacccgag cactctggaa
     1801 gacccggcca agatcgagct gccaggtggc ggcgcgcggc ggcggctgtc cgccgggggc
     1861 gtcgaatgcg agcgtgtagg cggcggtgcc gccgaagcgc tgggtctggt tggtgtcgcc
     1921 gagttcggtc caagaggcga ggcggcgggt ggcgaaggca gcgggcagct cggggccgcc
     1981 ggcgaggaac cgcacctgcc agttgccgcc gagggtgcgg gattcgcccg ccggttccca
     2041 gagggggaag gccgggcctt cgacggcgcg ggtgtcgagg atgcggagaa ttacggacgc
     2101 tccgggcggc aattggagac ggacttcggt ttggttggcg gcgctccgtc ggatcgccgc
     2161 catacccgcg cggcctgaga gcgggtcgag gatgacaacg gacctggcag ccgtggccag
     2221 cggcacccag ccgtccacgg tttgttcgcc gcgattggcg atgaagtagt agcggccgtc
     2281 gtccagcttg cggcggatgc acatgaggcc ggggatgtcg aacagcgtct cgcgcgggac
     2341 gcccgtcagc gaggaaagtt ccccatgctt ccagaccacc agttcgcctt tcccgtgcct
     2401 gctcctccgg ttcgcgccag gctccaccgg attcccaatc ccgcttcggg cgaggaactg
     2461 gagcgattgc cgcttggcgt ccaagtcccc cagtcctgcg acgtcttcgg gagtttcccc
     2521 ttgaaagacg actgtggcgc cggtttcggc gagtctgtcc aaggcccgga gggtttccgc
     2581 cgagatcacc cgggtttgcg gcacgacgac gatgcgatag acgccgccgg gagttgtgat
     2641 ttttccgttc tccactttcg ccgccgccag ttgccgtccg gagacgtagt tgaactggta
     2701 gccggcgttc cagagttttt gggccagttt gccgatgggc tgttcctcga accaagcgcg
     2761 ccggtggatg ttaaggttga gggtcatgcc gtcgggcctg ctccataaat catggatggg
     2821 ccagtagagc aggatgtcgt tgtcgggctg gccggcttgg agcacggact ggcagcgggt
     2881 gatgtaggcg ttgagcgcgt ccgtgtcgcg ccagatgggg ttgcgcgagt tcatctgcgt
     2941 gctggcatag aacacccagc cgggccaggg gacttcgtcg ggcgaatagc aggcgccgtg
     3001 gtagaaaaca tggttcacgc cggagagaaa caggtcgtcc acgaggtatt tcatgtccgc
     3061 cagggtctcg gtgaaatgct cgcggagcca ggtgccggtt tcggccgaga caaggcgtct
     3121 gccggtgacg tgcgcggcgg acgaggcgaa cttcgagatg agcctgttgc ggtcccggtg
     3181 gaacatttcc gtctccggga tgtcggcaac ggcgtagaga tcgagccagt tgccgggcga
     3241 gccgtgggct tggttgcgcg tgagaaaacc gcggtcgcgc gcccagcggg accacatggg
     3301 cagggtgacc tcggccatga tgtcggagat ggtctcgcgg tagtcgcact tcacgcgcgc
     3361 ggcgcggtcg gcgggctggc cggtgaggaa ggcgtcgagg tggtcttgca agcggtagcc
     3421 gcgccggcgc tcgaactcgg cgagcaggga gggggaccag tccatgtggt attcgtagga
     3481 gtcgtggtat tgggcgcggg gcatggcgcc ttgatagttc gcgaaagccg cgtccatcca
     3541 gcgcaggaaa ttcgacatcg ccggggcgtg cgcgaggttg atcatccagc cttcgcctcc
     3601 gggcgcggcg cgctccactt tcgtgccgga ggggcgttgg gagagggcgt aaacggtcca
     3661 ttcgcccgcg ggcgcggtcc agttcacggc gccgtcgggc gcgatgcggt cgagcaggtc
     3721 ggctttccgt ccgtccgggc caaaggccat cagggcctgc gtttgggcgc ggtccaacag
     3781 gttggtcagc gtgccgccgg aggaaacgct ccattgccgg cgcaccagga gcgcgttggc
     3841 ttcttcgtcg gtgactttgg ggccgccgaa gcaccagccc gtgccggtgg tcatgtccac
     3901 ttccattccg agccg
//
LOCUS       DATIKR010000178         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_159670, whole genome shotgun sequence.
ACCESSION   DATIKR010000178 DATIKR010000000
VERSION     DATIKR010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159670"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..892
                     /gene="trpC"
                     /locus_tag="VLL76_02665"
     CDS             68..892
                     /gene="trpC"
                     /locus_tag="VLL76_02665"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HSV28424.1"
                     /translation="MSTAPTILDRINAEKRKQVAEQKNRRPIQELLKRAQDQAPPRGF
                     LASLEKSIAERGIGLIAEIKKASPSAGVIRSDFNPTLLARAYQNGGAACLSVLTDQKF
                     FQGSDADLGAARSACALPVIRKDFMVDPYQVVEARALGADCILLIVASLTDAELQNME
                     EIAMGYGMDVLVETHDEAEMERALKLKSRLIGINNRNLKIMKTDLATTERLAPMVPSD
                     RLIVCESGINSPVDVKRMADAGAKAFLVGESLMRRQDVEMATRVLLTGYAAAGKSY"
     gene            892..1368
                     /gene="moaC"
                     /locus_tag="VLL76_02670"
     CDS             892..1368
                     /gene="moaC"
                     /locus_tag="VLL76_02670"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007675363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HSV28425.1"
                     /translation="MADLTHFDRDGNAHMVDVGDKSETERVATAKGSVLLAPATMALI
                     QSRGVKKGDVLAVAQLAGIMGAKRTSDLIPLCHPLALTSVKVDLRLDPARNAVDIEAT
                     CKLTGRTGVEMEALTAVSVAALTVYDMVKAVDKSMRITDIRLVHKSGGKSGTYEAE"
     gene            1365..>2254
                     /gene="glp"
                     /locus_tag="VLL76_02675"
     CDS             1365..>2254
                     /gene="glp"
                     /locus_tag="VLL76_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HSV28426.1"
                     /translation="MMISVETALARVLEGLAPVAAETVALPQSLGRVLAEDLAARVAH
                     PPVAVSAMDGYACRQADIDAAPATLTLVGESAAGHPFAGSVGPGQTVRIMTGAAVPEG
                     ADAVVMQEDTARDGNRVTINTSKGSHIRAPGNDFSAGDVLLRAGIVMGPRQIGLAAAM
                     NIPWVAVRRRPRVAVLSTGDEIAMPGEPLRPAQIVSSNGPALAALVQAAGCDVVQLGI
                     AKDSRDSLNAMLDAVSGVDLLVTSGGVSVGDYDIVQDVLAEHGMKLDFWKIAIRPGKP
                     LMFGNLRGIPVLGLPGNPVSA"
BASE COUNT          370 a          787 c          756 g          341 t
ORIGIN      
        1 cgacaccggc aaggcccagg ccgtgctgga gcgtctggtg gcgatcacca accgggaaat
       61 ctgagacatg agcaccgccc ccaccatcct ggaccgcatc aacgccgaga agcgcaagca
      121 ggtcgccgaa cagaagaacc gtcgccccat ccaggaattg ctgaagcgcg cccaggacca
      181 ggcgccgccg cgcggcttcc tggcctcgct ggaaaaatcc atcgccgagc gcggcatcgg
      241 cctgatcgct gagatcaaga aggcgtcgcc ctcggccggc gtgatccggt ccgacttcaa
      301 tcccaccctg ctggcccgcg cctatcagaa cggcggcgcc gcctgcctgt cggtgctgac
      361 cgaccagaag ttcttccagg gttcggacgc cgatttgggc gccgcccgct ccgcttgcgc
      421 gctaccggtg atccgcaagg atttcatggt cgacccctat caggtggtcg aggcccgcgc
      481 gctgggcgcc gactgcatcc tgctgatcgt cgcctcgctg accgacgccg aattgcagaa
      541 catggaagag atcgccatgg gctacggcat ggacgtcctg gtcgagaccc atgacgaggc
      601 cgagatggag cgggcgctga agctgaagtc ccgcctgatc ggcatcaaca accgcaacct
      661 caagatcatg aagaccgatt tggcgaccac cgagcggctg gcgcccatgg tgccgtcgga
      721 tcggctgatc gtgtgcgaga gcggcatcaa cagcccggtg gacgtcaagc gcatggccga
      781 tgccggcgcc aaggccttcc tggtcggcga atcgctgatg cggcgccagg atgtggagat
      841 ggcgacccgc gtgctgctga ctggctacgc cgccgccggc aagtcgtact gatggccgac
      901 ctcacccatt tcgaccgcga cggcaacgcc cacatggtgg acgtcggcga caagtccgag
      961 acggaacggg tcgccaccgc caaggggtcc gtgctgctgg cccccgccac catggcgctg
     1021 atccagtcgc gcggcgtcaa gaagggcgac gtgctggcgg tcgcgcaatt ggccggcatc
     1081 atgggcgcca agcgcacgtc cgacctgatc ccgctgtgcc atcctctggc gctgacctcg
     1141 gtgaaggtgg accttcgcct cgaccccgcc cgcaacgccg tggatatcga ggcgacctgc
     1201 aagctgacgg gccggaccgg cgtcgagatg gaagccttga ccgccgtcag tgtggcggct
     1261 ctcacggtgt acgacatggt gaaggcggtg gacaaatcca tgcgcatcac cgacatccgc
     1321 ctcgtccaca aatcgggcgg caagtcggga acctacgagg ccgaatgatg atctccgtcg
     1381 aaaccgcttt ggcgcgcgtg ctcgagggcc tcgccccggt cgccgccgaa accgtggccc
     1441 tgccgcaatc cctgggccgc gtcctggccg aggatctggc cgcccgcgtc gcccatccgc
     1501 cggtggcggt gtcggccatg gacggctatg cctgccgcca ggccgacatc gacgcggctc
     1561 cggcgacgct gacactggtc ggcgaatccg ccgccggcca tcccttcgcc ggctccgtgg
     1621 ggccgggcca gacggtgcgc atcatgaccg gcgcggcggt gcccgagggc gccgacgccg
     1681 tggtgatgca ggaggacacc gcccgcgacg gcaaccgggt tacgatcaac acgtcgaagg
     1741 gtagccacat ccgcgctccc ggcaacgatt tctcggccgg cgacgtgctg ctgcgggcgg
     1801 gaatcgtgat ggggccgcgc cagatcggcc tggccgccgc catgaacatt ccgtgggtgg
     1861 cggtgcgccg ccgcccccgc gtcgccgtgc tgtccaccgg cgacgagatc gccatgccgg
     1921 gcgagcccct gcgccccgcc cagatcgtgt cgtccaacgg ccccgccttg gcggcgctgg
     1981 tccaggcggc cggctgcgac gttgtgcaat tgggcatcgc caaggacagc cgcgactcgc
     2041 tcaacgccat gctcgacgcc gtgtccggcg tcgatctgct ggtgacgtcg ggcggcgtgt
     2101 cggtgggcga ttacgacatc gtccaggacg tgttggccga gcacggcatg aagctcgatt
     2161 tctggaagat cgccatccgt cccggcaagc cgctgatgtt cggcaacctg cgcggcatcc
     2221 cggtgctggg cctgcccggc aacccggtgt cggc
//
LOCUS       DATIKR010000179         2596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_135855, whole genome shotgun sequence.
ACCESSION   DATIKR010000179 DATIKR010000000
VERSION     DATIKR010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135855"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1060
                     /locus_tag="VLL76_02680"
     CDS             <1..1060
                     /locus_tag="VLL76_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSV28427.1"
                     /translation="LRIWSAGCSIGPEPYSIAILLKREFGLQIRDWHVSIVGTDINQK
                     FLARARDGRYDEWAFRTTPDDVRRDCFEPAGKQWQIRPEFKSWVSFQYHNLIRNRFPS
                     ILDNITAFDIIICRNVVIYFSPETVAELVPRFRETLVDGGWLVMGHAEPNQDLFRSFH
                     TVNVPGAVLYQRVDAPVAAPAPILAPCAPIRPAAAPVALPTKPRPVARPTPSPPPAPA
                     PASADLAAVRALADRGQWEDALKSCDRLIENNNLDARLHFFRALVLEQMGNNDESEKS
                     LRRSIYLDRHFVLAHYHLGLFLQRRSESGAAVRSFRNVLMLLDRLGDDFAFTDGDNIT
                     AGQLRETVVMHLKIIGAA"
     gene            1063..1668
                     /locus_tag="VLL76_02685"
     CDS             1063..1668
                     /locus_tag="VLL76_02685"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSV28428.1"
                     /translation="MANDADLGGLVDRLHRQGGAGMRLDDPAFVEQVLKLRASRLAQS
                     RDLGDDKPPGIAVLCFRVGGEAYAVPLGELAEVMPLGAWTPVPGQPQQLLGVVNVRGE
                     IRPVLDLHAMLTLPPPEAGGGYIVFLRAGGREIGLRVDGLDRIRFLDPDTLTRPHESA
                     NGLPQRFVAGITPDTLILLDPRQVLALEVLQDRRADYRRAI"
     gene            1683..>2596
                     /locus_tag="VLL76_02690"
     CDS             1683..>2596
                     /locus_tag="VLL76_02690"
                     /inference="COORDINATES: protein motif:HMM:NF025055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSV28429.1"
                     /translation="MTNLHFSLWKRIQLRHKFIVVAAMFTAVLAGLIAFNVWVVNGQK
                     DNTVVADLAGRQRMLSQKYMKEVILAAQGMASDHDGTLKLMRETQSVLADGGSALLSV
                     EGGQRADLAGAPNAEIRAKLTEQGNLIRQLETEAGRYLALSANDGRRAEKLRELLAIQ
                     GQLSQVADQVVKAYTRETEAMIGRAVALQVAVGIIGALAGMIISWGISVQIVNPLAAC
                     AEAALQIAKGNLRLDPQRITSGDELGLLQRAFNEMLASLREIAFQSREVCDNLTLAAA
                     QILASTQEQAAGTKQQAAAVQEITTTVE"
BASE COUNT          416 a          921 c          856 g          403 t
ORIGIN      
        1 gctgcgcatc tggagcgccg gctgctccat cggccccgaa ccctattcca tcgccatcct
       61 gctcaagcgc gagttcgggc tgcagatccg cgactggcat gtgtccatcg tcggcaccga
      121 catcaaccag aagttcctgg cccgcgcccg cgacggccgc tacgacgaat gggccttccg
      181 caccaccccc gacgacgtcc gccgcgactg cttcgagccg gcgggcaagc aatggcagat
      241 ccggccggaa ttcaagtcgt gggtcagctt ccagtaccac aacctgatcc gcaaccgctt
      301 cccctcgatc ctcgacaaca tcaccgcctt cgacatcatc atctgccgaa acgtggtgat
      361 ctatttcagc cccgagacgg tggccgagct ggtgccgcgc ttccgcgaga cgctggtgga
      421 cggcggctgg ctggtgatgg gtcacgccga gcccaaccag gatctgttcc gctccttcca
      481 caccgtcaac gtgcccggcg ccgtgctgta tcagcgggtg gacgccccgg tggcggcgcc
      541 ggcgcccatc ctcgccccat gcgcgccgat ccggccggcg gccgcgccgg tggcgctgcc
      601 gaccaagccg cgcccggtcg cacggccgac accgtcgcca ccgcccgcgc ccgcgccggc
      661 ctcggccgat cttgcggcgg tgcgggcctt ggccgaccgg gggcagtggg aagacgcgtt
      721 gaaatcctgc gaccggctga tcgagaacaa caacctcgac gcccgcctgc atttcttccg
      781 cgccctggtg ctcgagcaaa tgggcaataa cgacgaaagc gaaaagtcgc tgcggcggtc
      841 catttacctc gaccgccatt tcgttctcgc gcattatcac cttggcttgt tcctgcagcg
      901 gcgtagcgaa tccggggccg cggtgcggtc gttccgcaac gtcctgatgc tgctggaccg
      961 cctgggggac gatttcgcct ttaccgacgg cgacaacatc acggccgggc aattgcgtga
     1021 gaccgtggtg atgcatctca agatcatcgg ggcggcatga gcgtggcgaa cgacgctgac
     1081 ttggggggat tggtggaccg cctgcatcgg cagggcggcg ccggcatgcg gctggacgac
     1141 cccgccttcg tcgagcaggt gctcaagctg cgcgccagcc gcctggcgca atcgcgcgat
     1201 ctgggcgacg acaagccgcc gggtatcgcc gtgctgtgct tccgcgtcgg cggcgaagcc
     1261 tatgccgtgc cgctgggcga gctggccgag gtgatgccgc tgggggcgtg gacgccggtg
     1321 ccgggccagc cgcagcaatt gctgggcgtc gtcaacgtgc gcggcgagat ccggccggtg
     1381 ctggacctgc atgccatgct gaccctgccg ccgcccgagg cgggcggggg ctacatcgtg
     1441 ttcctgcgtg ccggcggccg cgagatcggc ctcagggtcg acggcctcga ccgcatccgc
     1501 ttcctcgatc ccgacacgct gacccgcccc catgaaagcg ccaacggcct gccgcagcgt
     1561 ttcgtggcgg gcatcactcc cgacaccctg atcctgctcg accctcgaca ggtcctggcg
     1621 ctcgaggtcc tgcaggaccg acgggccgac taccgacgcg ccatctgaag gaaagctgaa
     1681 cgatgaccaa ccttcacttc tcgctgtgga agcgcatcca gctccgccac aaattcatcg
     1741 tggtggcggc gatgttcacc gcggtgctgg cggggctgat cgccttcaac gtttgggtcg
     1801 tcaacggcca gaaggacaac acggtggtcg ccgacctggc cggccgccag cgcatgctgt
     1861 cgcagaagta catgaaggag gtcatcctgg cggcccaggg gatggcgtcg gaccacgacg
     1921 gcaccctcaa gctgatgcgc gagacccagt cggtgctggc cgacggcggt tcggcgctgc
     1981 tgtcggtcga aggcggccag cgggccgacc tggccggcgc gcccaacgcc gagatccgcg
     2041 ccaagctgac cgagcagggc aacctgatcc gccagttgga gaccgaagcc ggccgctacc
     2101 tggcgctgtc cgccaatgac ggccgccgcg ccgagaagct gcgcgaattg ctggcgatcc
     2161 agggccagtt gtcccaggtg gccgaccagg tggtgaaggc ctacacccgc gagaccgagg
     2221 ccatgatcgg ccgcgccgtg gcgctgcagg tcgccgtcgg catcatcggc gcgctggccg
     2281 gcatgatcat cagctggggc atcagcgtcc agatcgtcaa tccgctggcc gcctgcgccg
     2341 aagccgccct gcagatcgcc aagggcaatt tgcgcctcga cccgcagcgc atcacctcgg
     2401 gcgacgagct cggcctgttg cagcgcgcct tcaacgagat gctggcgtcc ttgcgcgaga
     2461 tcgccttcca gtcgcgcgag gtgtgcgaca acctgaccct ggccgccgcc cagatcctgg
     2521 cctcgaccca ggaacaggcc gccggcacca agcagcaggc ggcggcggtg caggagatca
     2581 ccaccaccgt cgagca
//
LOCUS       DATIKR010000180         4999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_111601, whole genome shotgun sequence.
ACCESSION   DATIKR010000180 DATIKR010000000
VERSION     DATIKR010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4999
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111601"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..1048)
                     /locus_tag="VLL76_02695"
     CDS             complement(191..1048)
                     /locus_tag="VLL76_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008622258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV28430.1"
                     /translation="MNIDLARTFLEIVETGNFNKAAERLDVTQSTVSMRIKALEDEIG
                     RPLFVRSKSGTALTAAGTQFRRYAQTLVRVWEQARQEIALPPGFRTVLNVGGQFSLWD
                     RLLVQWIPWMRTALPDVALRAEVGLSDGLMRQLAEGLLDIGVMYSPQSRPGLAIEKLL
                     EERLVMVSTRKRSVADWDDDYVFVDWGPEYRQAHGQAFPDLKAPAVSVGLGALGLQHI
                     LSYGGTGYFPMRVVRAALAQGRLHEVDDAPEFRRPAWLVYAQDEAREEWFGVALDGLR
                     HVASLESED"
     gene            complement(1216..1569)
                     /gene="raiA"
                     /locus_tag="VLL76_02700"
     CDS             complement(1216..1569)
                     /gene="raiA"
                     /locus_tag="VLL76_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HSV28431.1"
                     /translation="MQLPLQITFHGIDHSDAVETRVREKVAKLEQFFDRITACRVAIE
                     SHHKNTSNLHHKGDAYHVRIDLTVPGSELVVKRDSDEHEDVYGALKGAFQAMERQLKE
                     YAERARGDVKSHARA"
     gene            1797..3659
                     /gene="htpG"
                     /locus_tag="VLL76_02705"
     CDS             1797..3659
                     /gene="htpG"
                     /locus_tag="VLL76_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HSV28432.1"
                     /translation="MSEEKREFQAEVAKLLDIVVHSLYSNKEIFLRELVSNASDACDK
                     LRYAALTQPELTAGDADFRIRITPDKAARTLTIADNGIGMNKADLIANLGTIAKSGTA
                     EFIKQLSGDAKKDTNLIGQFGVGFYSAYMVADRVTVVTRKAGDAEGWRWESDGKGAFT
                     VAEDAGAQRGAALTLHLKEGEDEFLEPHTLRRIVKTYSDHIAIPVVLVEDGKDETINS
                     ASALWTRSKSEITAEQYKEFYHHVAHAFDEPWLTLHYKAEGAIEYTGLLYVPSQKPFD
                     IFHPDRKQHLKLYVKRVFITDDCSELLPPYLRFVRGVVDSQDLPLNISREMLQHNPVL
                     AKIRAGLVKRVLSELKKKADDAPDDFVTFWETFGPVLKEGIYEDFERKDDIVALSRFR
                     TTAGDGWATLDQVVERMKDGQDALYYITGDDVAALSRSPQLEGFKAKGIEVLLLTDPI
                     DEFWIPAVGEYKGKRLRAVTEAGIDLSAVKGEDKPGEDKPEAAPVEDMDTLIAALKLA
                     LGERVRDVKASDRLTESPVCLVAETGQMSIHLEKLLRAHKQLDSEASRILEINPRHGL
                     IKGMADRVKASGREAIDDMAHLLLDQARILEGEPPADPTAFARRLAGVMEKGLA"
     gene            complement(3781..>4999)
                     /locus_tag="VLL76_02710"
     CDS             complement(3781..>4999)
                     /locus_tag="VLL76_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28433.1"
                     /translation="AYVGEVLARRLAMFRVAEPVFPSAAYRHEQPFFLFSPAFAPVAC
                     AYVAEVVMVECRDALERHVYRHLEPRFGADDGALKAVLDEARPQIWKILAERLTKLAG
                     HHRNAEAKLDAARAGGGDGPEFAEVEVPVTHPRVFRVLGVEFVLGNRTTTRKMKVRVK
                     ASTELDRDEMRALDLITRLGDMAADEGVELPDSCDFLFLRSLLEFDARKYGQTQKELV
                     ALAGHEETTRAYLFERLKAVEEHYSNTLADVMVLMLFAAGAECRFGFKEMLDVCLGTA
                     KSMDAVATQRPFLVAEIGRRPRELAFQLREALRRRYDENTVAAATRQLLEVWEAMPRS
                     RFERDLDAALTVFSAFPVAFAGDPDEPALSEIGHILHRALAGKSPEPRATIDAVVAAY
                     APLAQRLREAVRG"
BASE COUNT          902 a         1679 c         1627 g          791 t
ORIGIN      
        1 caccgctcat caagactgag ctgatcgtat gttagtccca tcgcaccacc ccttatacag
       61 ggtgttgcgc ttgttacgtg agcttagcgg atccatgttg gggcgggcgc ggtgcctgac
      121 caccaaatat tcagcggctg atgcatggat tcccgctttc gcgggaatga cggaatatta
      181 tccgtatcct ctaatcttcg ctttccagcg aggcgacgtg gcgcaggccg tccagggcca
      241 cgccgaacca ttcctcgcgc gcttcgtcct gggcatagac cagccaggcc gggcggcgga
      301 attcgggggc gtcgtcgacc tcgtgcaggc ggccctgggc caacgccgca cgcaccaccc
      361 gcatggggaa atagccagtg ccgccgtagc tgaggatgtg ctgcaggccc aaggccccca
      421 ggcccaccga caccgccggc gccttgaggt cggggaaggc ctggccgtgg gcctggcggt
      481 attccggacc ccaatcgacg aagacgtagt cgtcgtccca gtcggcgacc gaccgcttgc
      541 gcgtggacac catcaccagg cgctcttcca gcagcttctc gatggcgagg ccggggcggc
      601 tttgcggcga atacatcacg ccgatgtcca gcaggccctc ggccaattgc cgcatcaacc
      661 cgtccgacag gccgacctcg gcccgcaacg ccacgtcggg cagcgccgtg cgcatccacg
      721 ggatccactg caccagcaag cggtcccaca gcgaaaactg gccgccgaca ttgagcacgg
      781 tgcgaaagcc cggcggcagg gcgatttcct ggcgcgcctg ttcccacacc cgcaccagcg
      841 tctgggcgta gcggcggaac tgggtgccgg cggcggtcag cgcggtgccc gatttcgagc
      901 gcacgaacag cggccggccg atctcgtctt ccagcgcctt gatgcgcatg ctgacggtgg
      961 actgggtgac gtccagccgt tcggccgcct tgttgaagtt gccggtctcg acgatttcga
     1021 ggaaggtacg cgcgaggtcg atgttcattg ggacgcccag ggggaaaacg cctgcgcttc
     1081 taacgcatgc gggggcgaac atcaacagct tcaaccggcc tgatcggttt ttccgattta
     1141 ctaatatgca ggcgcgcgaa aacggccgga gcccacggcg tccggccgtt catggaaaca
     1201 gctttgccgg cgcgatcagg cgcgggcgtg gctcttcacg tcgccgcgag cgcgctcggc
     1261 gtattccttg agctggcgct ccatcgcctg gaacgcgccc ttgagggcgc cgtagacgtc
     1321 ctcgtgctca tcgctgtcgc gcttgaccac cagttccgaa cccggaacgg tcaggtcgat
     1381 gcgcacgtga taggcgtcgc ccttgtggtg gaggttcgag gtgttcttgt ggtgcgactc
     1441 gatcgccacg cggcaggcgg tgatgcgatc gaagaactgc tccagcttgg ccaccttctc
     1501 gcggacgcgc gtttcgacgg cgtccgaatg gtcgatgccg tgaaaggtga tctggagggg
     1561 aagctgcatg aaaatctccc tggtcatcaa atccgcgctg ccgtctctcc cggctgctgc
     1621 ggtcccacgc aatcggggac gctatacata ccgattcgat ccggcaagag caacgccgat
     1681 gcgcgaagct ttcattcttt cgaataagcg ccccacttgc aaccctcgcg ggcctgcctc
     1741 atatcaaggc cccactcggg gtcaaccgac cgaacacaga gagacgcgaa caagccatgt
     1801 ccgaagaaaa gagggaattc caggcggaag tcgccaagct gctggatatc gtggtccact
     1861 cgctgtactc caacaaggag atcttcctgc gcgagctggt gtcaaacgcc tcggacgcct
     1921 gcgacaagct gcgctatgcc gcgctgacgc agcccgagct gaccgccggc gatgccgatt
     1981 tccgcatccg catcaccccc gacaaggccg cccgcacgct gaccatcgcc gacaacggca
     2041 tcggcatgaa caaggccgac ctgatcgcca acctgggcac catcgccaag tcgggcaccg
     2101 ccgaattcat caagcaattg tcgggcgacg ccaagaagga caccaacctg atcggccagt
     2161 tcggcgtcgg cttctattcc gcctacatgg tggccgaccg cgtcaccgtg gtcacccgca
     2221 aggccggcga tgccgagggc tggcgctggg aatccgacgg caagggcgcg ttcacggtgg
     2281 ccgaggatgc cggcgcccag cgcggcgccg cgctgaccct gcacctcaag gagggcgagg
     2341 acgagttcct ggagccccac accctgcgcc gcatcgtgaa gacctattcc gaccacatcg
     2401 ccattccggt ggtgctggtc gaggacggca aggacgagac catcaactcg gcctcggcgc
     2461 tgtggacccg ctcgaagtcc gagatcacgg ccgagcagta caaggaattc taccaccacg
     2521 tcgcccacgc cttcgacgag ccgtggctga ccctgcatta caaggccgaa ggcgcgattg
     2581 agtacaccgg cctgctgtac gtgccgtcgc aaaagccctt cgacatcttc caccctgacc
     2641 gcaagcagca cctcaagctg tacgtcaaaa gggtgttcat caccgacgac tgctccgaac
     2701 tgctgccgcc ctatcttcgc ttcgtgcgcg gcgtggtcga cagccaggac ctgccgctca
     2761 acatcagccg cgagatgctg caacacaacc cggtgctggc caagatccgc gccggcctgg
     2821 tcaagcgggt gctatccgag ctgaagaaga aggccgacga cgcccccgac gacttcgtca
     2881 ccttctggga gaccttcggc ccggtgctga aggaaggcat ctacgaggat ttcgagcgca
     2941 aggacgacat cgtcgcgctg tcgcgcttcc gcaccaccgc cggcgacggc tgggcgacgc
     3001 tggaccaggt ggtcgagcgc atgaaggacg gccaggacgc gctgtactac atcaccggcg
     3061 atgacgtggc ggcgctgtcg cgcagcccgc agctcgaagg cttcaaggcc aagggcatcg
     3121 aggtgctgct gctgaccgac cccatcgacg agttctggat tccggcggtc ggcgaataca
     3181 agggcaagcg cctgcgcgcc gtcaccgagg ccggcatcga cctgtccgcc gtcaagggcg
     3241 aggacaagcc cggcgaggac aagcccgagg ccgccccggt cgaggacatg gacaccctga
     3301 tcgccgccct gaagctggcc ctgggcgagc gcgtgcgcga cgtcaaggcg tcggaccgcc
     3361 tgaccgaatc gccggtctgc ctggtggccg aaaccggcca gatgagcatc cacctggaaa
     3421 agctgctgcg cgcccacaag cagctcgaca gcgaggcgtc gcgcatcctg gagatcaacc
     3481 cccgccacgg gctgatcaag ggcatggcgg accgggtcaa ggcgtcgggc cgcgaggcca
     3541 tcgacgacat ggcccatttg ctgctggacc aggcccgcat cctggaaggc gaacccccgg
     3601 ccgaccccac cgccttcgcc cgccgcctgg cgggggtgat ggaaaagggg ctggcctagg
     3661 atcagataaa gaggaaaatt ccaccaccaa ggcaccaaga caccaagaga gctgccgtgg
     3721 ggcagggaga gtgcctcccg gcacgccatc ttggtgtctt ggtgtcttgg tggtgaatcc
     3781 tcatccccgc accgcctcgc gcagtcgctg cgccagcgga gcgtaggcgg ccaccacggc
     3841 gtcgatggtg gcgcggggtt cgggggactt gccggccagc gcgcggtgca ggatgtggcc
     3901 gatctcgctg agggccggct cgtcggggtc gccggcgaag gccaccggga aggccgagaa
     3961 caccgtcagc gccgcgtcca ggtcgcgttc gaagcggctg cgcggcatcg cctcccacac
     4021 ctccagcaac tggcgggtcg ccgccgccac cgtgttctcg tcatagcggc ggcgcagcgc
     4081 ctcgcgcagc tggaaggcca gctcgcgcgg gcggcggccg atttccgcca ccaggaacgg
     4141 gcgctgggtc gccaccgcgt ccatggactt ggccgtgccc aggcagacgt cgagcatttc
     4201 cttgaagccg aagcggcatt cggcgccggc ggcgaacagc atcagcacca tgacgtcggc
     4261 cagggtgttg gagtaatgct cctcgaccgc cttgaggcgc tcgaacagat aggcccgcgt
     4321 cgtctcctcg tggccggcca gcgccaccag ttccttctgc gtctgaccgt atttcctggc
     4381 gtcgaattcc agcaacgagc gcaggaacag gaagtcgcaa ctgtcgggca gctcgacgcc
     4441 ttcgtcggcg gccatgtcgc ccagccgggt gatcaggtcg agcgcccgca tctcgtcgcg
     4501 gtccaattcg gtcgaagcct tgacgcgcac cttcatcttg cgggtggtgg tgcggttgcc
     4561 cagcacgaat tcgacgccca gcacccggaa cacgcgggga tgggtgaccg ggacctcgac
     4621 ctcggcgaat tccgggccgt cgccgccgcc ggcgcgggcg gcgtcgagct tggcctcggc
     4681 attgcgatga tggccggcca gcttggtcag gcgctcggcc aggatcttcc atatctgcgg
     4741 ccgcgcctcg tcgaggacgg ccttgagcgc cccgtcatcg gcgccgaagc ggggttcgag
     4801 gtggcggtag acgtggcgct ccaaggcgtc gcggcattcc accatcacca cctcggccac
     4861 ataggcgcag gcgacggggg cgaaggccgg gctgaacagg aagaagggct gttcatggcg
     4921 ataggcggcg ctgggaaaga ccggctcggc cacccggaac atggcgaggc ggcgggccag
     4981 cacttcgccc acataggcg
//
LOCUS       DATIKR010000181         1845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_232481, whole genome shotgun sequence.
ACCESSION   DATIKR010000181 DATIKR010000000
VERSION     DATIKR010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232481"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..584)
                     /locus_tag="VLL76_02715"
     CDS             complement(108..584)
                     /locus_tag="VLL76_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV28434.1"
                     /translation="MITATEKTSTRRHSSRGRTPSGKPNPIDVHVGGRVRLRRTLLGM
                     SQEKLGEALGLTFQQVQKYERGANRVGASRLFDLSRVLDVPVSFFFDDMPQEVEALSP
                     RLISGIAEEPSGFEHDPMTKRETLELVRAYYRITDPQVRRRVLDLARALGASSDSE"
     gene            1017..>1845
                     /locus_tag="VLL76_02720"
     CDS             1017..>1845
                     /locus_tag="VLL76_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HSV28435.1"
                     /translation="MAERALITVDGNEACASVAYRVSEVAAIYPITPSSTMGELSDEW
                     SANGQTNIWGVVPEIAEMQHEGGAAGAVHGALQAGALSTTFTASQGLLLMIPNMYKIA
                     GELTSFTMHVSARTIATHALSIFGDHSDVMACRQTGFAMLASASVQEAHDMAMVAHAA
                     TLKARVPFLHFFDGFRTSHEVAKIEELTDDDLRAMIDEKLVQAHRDRALSPDRPVLRG
                     SSANPDTFFQAQEARNPWYQGCPGVVQETMDRFAALTGRQYHLFDYYGAPDAEKVIII
                     "
BASE COUNT          341 a          589 c          586 g          329 t
ORIGIN      
        1 aggatgatct aaaccgacgg tggaaaacaa ccatacaaac gcatagaaac ggccggcccg
       61 atggttcggg ccggccgctc agagcgcacg attgtcgagg ggcgtcgtta ttcgctgtcg
      121 gacgaggcgc ccagggcacg ggcgaggtcg agcacgcggc ggcgcacctg cgggtcggtg
      181 atgcggtaat aggcgcgaac cagttccagc gtctcgcgct tggtcatggg atcgtgctcg
      241 aaaccggacg gctcttcggc gatgcccgag atcagacggg gcgacagcgc ctcgacttcc
      301 tgcggcatgt cgtcgaagaa gaagctgacc ggcacgtcca gcacgcgcga caggtcgaac
      361 aggcgcgaag cgccgacgcg gttggcaccg cgctcgtact tctggacctg ctggaaggtc
      421 aggcccaggg cttcgcccag cttttcctgg ctcatgccga gcagggtgcg gcgcaggcgg
      481 acacggccgc ccacatgcac gtcgatgggg ttcggcttgc cggagggggt acggccgcgg
      541 ctggaatggc ggcgggtgga ggtcttttcg gttgcagtga tcattattca attcctgatg
      601 ggtggcgccc gactacatat atgtcagatt tcccaccgaa gaagcaacca tgtgttgtgc
      661 gttgggaggc atgcgtcgaa cgccgtagta cgacgcatcc ggatgatctt cacaaccgcg
      721 caatttccgt tcgcgcccgc aaaggaaaat ttccgatcaa aacccgccgc tggcctcgat
      781 tcgccgtcgc cctacccgcg ccggtaacgc taccccacac catcggggtg caaagcggat
      841 gtgcgaatca ttcctagccg cattcgcgag aatttttatt tctttttatg ggcatttttc
      901 aaaaggaact tgcgtgttcg caggtgcaat gtaatcctgc cttaaccatg ggcataggcc
      961 gcgcacgccc ttggtctatt tttcaggcgg cttggcgaca caggaatcgg acggaaatgg
     1021 ctgaacgggc tttgatcacg gtcgacggca acgaggcgtg cgcctctgtg gcttatcgcg
     1081 tcagcgaggt ggcggcgatc tatccgatca cgccgtcgtc caccatgggc gagctgtccg
     1141 acgaatggtc ggccaacggc cagacgaaca tctggggcgt ggtgcccgag atcgccgaga
     1201 tgcagcacga gggcggcgcc gccggcgcgg tccacggcgc gctgcaggcg ggcgcgctgt
     1261 cgacgacctt cacggcgtcg cagggcctgc tgctgatgat ccccaacatg tacaagatcg
     1321 ccggcgagct gacctcgttc accatgcacg tgtcggcgcg caccatcgcc acccacgcgc
     1381 tgtccatctt cggcgaccat tccgacgtca tggcctgccg ccagaccggc ttcgccatgc
     1441 tggcctctgc cagcgtgcag gaagcccacg acatggcgat ggtggcccat gccgccaccc
     1501 tgaaggcgcg cgtgccgttc ctgcacttct tcgacggctt ccgcacctcg cacgaggtcg
     1561 ccaagatcga ggaactgacc gacgacgacc tgcgcgccat gatcgacgaa aagctggtgc
     1621 aggcccaccg cgaccgcgcg ctgtcgcccg accgtccggt gctgcgcggt tcgtcggcca
     1681 atcccgacac cttcttccag gcccaggaag cgcgcaaccc gtggtaccag ggctgccccg
     1741 gcgtggtgca ggagaccatg gaccgcttcg ccgcgctgac cggccgccag taccacctgt
     1801 tcgactacta cggtgccccg gatgcggaaa aagtgatcat catca
//
LOCUS       DATIKR010000182         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_159757, whole genome shotgun sequence.
ACCESSION   DATIKR010000182 DATIKR010000000
VERSION     DATIKR010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159757"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VLL76_02725"
     CDS             complement(<1..1199)
                     /locus_tag="VLL76_02725"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSV28436.1"
                     /translation="MLSTPMARRGMVSTPHHLASQAGLAVLRDGGNAIEAAIAAAATL
                     GTVLPHLNGLGGDGFWLIAEPGKPPISIDGSGASGGKVDAALYRNQHFAEIPTRGPLA
                     AATVAGAVSAWQLALDVSAHWGGGMPLERLFEDAIDLARTGFAVTRGQAEATQRLLPE
                     LKKVPGFAAQFLAKTRAPAAGATMTLPRLADTLDRLAAAGLDDFYRGEVARQIAEDLK
                     EAGSPLRSDDLARHRGMRRRPLSLGLPAGTAFNAAPPTQGLAALILLGVFQRLDIGEA
                     EGFLHHHALVEAAKQAFLVRDAHIADPHRMSVHATTYLSEPLLERMVGEVNAVRAAPV
                     SFKARGGDGVWFGVIDGQGRAVSVVQSLHMPFGSGVVLPQAGIAWHDRASAFSLAAED
                     RNLLEPRR"
     gene            1308..1766
                     /gene="gpt"
                     /locus_tag="VLL76_02730"
     CDS             1308..1766
                     /gene="gpt"
                     /locus_tag="VLL76_02730"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011187925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000310 - xanthine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HSV28437.1"
                     /translation="MSQDYRLAATIAVSWDTMHRDCLGLAGRLRAKGPFKGIVAVARG
                     GLVPAAIVARELDVKLVETVCISSYDSKVQGEPEVIKGLGGDGDGWLVVDDLVDSGAT
                     VRTVRAMLPKAHYATLYAKPEGLPLVDTFVAEIDQPVWIIFPWEAPPREE"
     gene            1935..>2408
                     /locus_tag="VLL76_02735"
     CDS             1935..>2408
                     /locus_tag="VLL76_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28438.1"
                     /translation="MIRIAIMSDLHVEKGPYHPPRLDADLVILAGDVGWGPEGVQWIA
                     QHLAGRPVVYVAGNREHWHWGDGTDPVAALRAQAARVPGLRFLQDEAAVFRFDDRHIR
                     ILGATLWTDYRLEGDPEAAMATAQARMPDYKNGRGSDGKPLTAAQVAAWNRGSVAF"
BASE COUNT          365 a          806 c          885 g          352 t
ORIGIN      
        1 cggcggggtt ccagcaggtt gcggtcctcg gcggccagcg agaaggcgct ggcgcggtcg
       61 tgccaggcga tgccggcctg aggcagcacc acgcccgaac cgaacggcat gtgcaggctt
      121 tgcaccacgc tgacggcgcg accctggccg tcgatcacgc cgaaccacac gccgtcgccg
      181 ccgcgcgcct tgaacgagac gggggcggcg cgcacggcat tgacctcgcc gaccatgcgt
      241 tccagcagcg gctcggacag ataggtggtg gcgtgcaccg acatgcggtg ggggtcggcg
      301 atgtgggcgt cgcgcaccag gaaggcctgc ttggcggcct cgaccagggc atggtggtgc
      361 aggaagccct cggcctcgcc gatgtccagg cgctggaaca cgcccaaaag gatcagcgcc
      421 gccagtcctt gcgtcggcgg cgcggcgttg aaggcggtgc cggcgggcag gcccagggac
      481 agcggccggc ggcgcatgcc gcgatggcgc gccagatcgt ccgagcgcag cgggctgccg
      541 gcttccttga ggtcctcggc gatctggcgg gcgacctcgc cgcgatagaa atcgtcgagg
      601 ccggcggccg ccaggcggtc gagcgtgtcg gccaaacgcg gcaaggtcat ggtggcgccg
      661 gcggcaggcg cccgcgtctt ggccaggaac tgggcggcga agcccggcac cttcttcagc
      721 tcgggcagca gccgctgggt cgcctcggcc tgaccgcggg tgacggcgaa accggtgcgg
      781 gccaggtcga tggcatcctc gaacaggcgc tccagcggca tgccgccgcc ccaatgggcc
      841 gacacgtcca gcgccagttg ccacgccgag acggcgccgg cgacggtggc ggcggccaac
      901 gggccgcgcg tggggatctc ggcgaagtgc tggttgcggt acagcgccgc gtccaccttg
      961 ccgcccgagg cgcccgaacc gtcgatcgaa atgggcggct tgcccggttc ggcgatcagc
     1021 cagaacccgt cgccgcccag gccgttgaga tggggaagga cggtgcccag ggtcgcggcg
     1081 gcggcgatcg ccgcctcgat ggcgttgccg ccgtcgcgca gcacggccag gccggcctgc
     1141 gaggcgaggt ggtgcggggt cgagaccatg ccccgccggg ccatcggagt actcagcatt
     1201 cccttggtat ccatccatgc cgaagcgagc ggcgattttg cttcgaaccg gagccgccgt
     1261 ccagatgtgc gtgttcgacc ccacccgctt ggtggtatct tcgccccatg agccaggact
     1321 accgccttgc cgccaccatc gccgtcagtt gggacaccat gcatcgcgat tgcctgggcc
     1381 tggccggccg cctgcgcgcc aaggggccgt tcaagggcat cgtggcggtg gcgcgcggtg
     1441 gcctggtgcc cgccgccatc gtcgcccgcg agcttgacgt caagctggtc gagacggtct
     1501 gcatatccag ctacgacagc aaggtccagg gcgaacccga ggtgatcaag ggcttgggcg
     1561 gcgacggcga cggctggctg gtggtcgatg atctggtgga ttcaggggcc accgtgcgca
     1621 ccgtgcgcgc catgctgccc aaggcccatt acgccacgct gtacgccaag ccggagggct
     1681 tgcccctggt cgacaccttc gtggccgaaa tcgaccagcc ggtgtggatc attttcccgt
     1741 gggaagcacc cccgcgcgag gagtgacgcc ctgccgccaa cgcgtgcggc tgccgtcgat
     1801 gattgaccac caagacacca agaacaccaa gaaaccgagt ccgtggcggg ccggccgcca
     1861 ccctggcacg gattcttggt gccttggtgt cttggtggtg aaatgaactt cagttcatgc
     1921 taatacatgc gcccatgatc cgcattgcca tcatgagcga cctgcatgtc gagaaggggc
     1981 cgtaccatcc gccccggctg gacgccgatc tggtgatcct ggccggcgac gtcggctggg
     2041 ggccggaagg ggtgcaatgg atcgcccagc acctggccgg gcggccggtg gtctatgtcg
     2101 ccggcaaccg cgagcattgg cattggggcg acggtaccga tcccgtcgcg gcgctgcggg
     2161 cgcaggcggc gcgggtgccc ggcttgcgct ttttgcagga cgaggcggcg gtgttccgct
     2221 tcgacgaccg ccacatccgc atcctgggcg ccaccctgtg gaccgactat cgcctggaag
     2281 gcgatcccga ggccgccatg gcgacggcgc aggcgcgcat gccggattac aagaacgggc
     2341 gcggcagcga cggcaagccg ctgacggcgg cacaggtggc ggcgtggaac cggggttcgg
     2401 tggcgttc
//
LOCUS       DATIKR010000183         1821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_220745, whole genome shotgun sequence.
ACCESSION   DATIKR010000183 DATIKR010000000
VERSION     DATIKR010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220745"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="VLL76_02740"
     CDS             complement(<1..302)
                     /locus_tag="VLL76_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018988215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV28439.1"
                     /translation="MNLNTKISALFVAIAMTLIAMLMVVSLYAFRSFSIASSTDHIRT
                     AAEIVRVHLTESMINGVIDKRESFLRRLEEVQGLAGARVVRSQLVEQQFGKGLNKEA"
     gene            484..1446
                     /locus_tag="VLL76_02745"
     CDS             484..1446
                     /locus_tag="VLL76_02745"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HSV28440.1"
                     /translation="MAVYTEVSDEELEEFVSGYDIGELVAFKGIAEGVENSNYLLQTD
                     RANYILTLYEKRVNRDDLPFFLGLMEHLAERGLACPTPLHGRDGRALRELCGRPAALV
                     TFLKGMSPRRVQVEHCAPLGAAMAEMHMKGADFAMSRANNLSVAGWRPLFEAAKDRAD
                     EVKPGLAQFIEAELAVLERDWPAGLPSGLIHADLFPDNVFFLNDRVSGLIDFYFACTD
                     SLAYDVAICLNAWCFEPDGQFNATKARLMLNGYRKVRPLQADELAALPLLARGAAMRF
                     LLTRLYDWLNTPAGAFVNRKDPLEYYRKLRFHQGLTGPGAYGIE"
     gene            1443..>1821
                     /gene="rnhA"
                     /locus_tag="VLL76_02750"
     CDS             1443..>1821
                     /gene="rnhA"
                     /locus_tag="VLL76_02750"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HSV28441.1"
                     /translation="MSDPRRAVVELYTDGACSGNPGPGGWGAILRFKDKEKELFGGEP
                     DTTNNRMEMMAVIEGLNALLRPCTVAVYTDSEYVKKGMTEWIRGWKARGWKTADKKPV
                     KNAELWQRLDAARAVHHVEWHWVR"
BASE COUNT          314 a          605 c          607 g          295 t
ORIGIN      
        1 gcctccttgt tgaggccctt gccgaattgc tgctcgacca gttgcgagcg caccacgcgg
       61 gcgccggcca gtccctgcac ctcttcaagg cggcgcagga agctttcacg cttgtcgatg
      121 acgccgttga tcatcgactc ggtcaggtgg acgcgcacga tttcggcggc ggtgcggatg
      181 tggtccgtcg agctggcgat cgaaaagctg cggaaggcgt aaaggctgac caccatcagc
      241 atggcgatca gcgtcatcgc gatcgcgacg aacagtgccg aaatcttggt attcagattc
      301 atagcccgtg cttcccccgt ctcccggcgc ggcgcctcgc ggcactcccc tgcgcaaccg
      361 gcaatcggct gaacaataat accgagggtc gaagcttgtc gagggtagtg aggcaaaccc
      421 ttggcaaacc tgattcgcct gtcgtacctt ccgccgcgaa gagcagaaca gaggcccggg
      481 ggcatggcgg tctacaccga agtttcggac gaggagctgg aggagttcgt ctccggctac
      541 gacatcggcg agctggtcgc gttcaagggc atcgccgagg gtgtcgagaa ctcgaactac
      601 ctgctgcaga ccgaccgggc caactacatc ctgacgctct acgagaagcg ggtgaaccgc
      661 gacgacctgc cgttcttcct ggggctgatg gagcatctgg ccgagcgcgg cctggcctgc
      721 ccgacgccgc tgcacggcag ggacggccgc gccctgcgcg agctgtgcgg ccgcccggcg
      781 gcgctggtca ccttcctcaa gggcatgagc ccgcgccgcg tccaggtcga gcattgcgcg
      841 ccgctgggcg ccgccatggc cgagatgcac atgaagggcg ccgatttcgc catgtcgcgc
      901 gccaacaacc tgtcggtcgc cggctggcgg ccgctgttcg aggccgcgaa ggaccgcgcc
      961 gacgaggtca agcccggcct ggcccagttc atcgaggccg agttggcggt gctggagcgc
     1021 gactggccgg ccgggttgcc ctcgggcctg atccatgccg acctgttccc cgacaacgtg
     1081 ttcttcctca acgaccgggt gtcgggcctg atcgacttct atttcgcctg caccgacagc
     1141 ctggcctatg acgtcgccat ctgcctgaac gcctggtgct tcgagccgga cggccagttc
     1201 aacgccacca aggcgcggct gatgctgaac ggctatcgca aggtgcggcc gctgcaggcc
     1261 gacgagctgg cggccctgcc gctgctggcg cgcggcgccg ccatgcgctt tttgctgacg
     1321 cgcctctacg actggctcaa caccccggca ggcgccttcg tcaaccgcaa ggacccgctg
     1381 gaatattacc gcaagctgcg cttccaccag ggcctgaccg gccccggcgc ctacggtatc
     1441 gaatgagcga tccccggcgg gcagtggtcg agctctatac cgacggcgcg tgcagcggca
     1501 accccggccc cggcggctgg ggcgccatcc tgcgcttcaa ggacaaggaa aaggagctgt
     1561 tcggcggcga gccggacacc accaacaacc gcatggaaat gatggcggtg atcgagggcc
     1621 tgaacgcctt gctgcggccc tgcacggtgg cggtctacac cgactcggaa tacgtcaaga
     1681 agggcatgac cgagtggatc cgcggctgga aggcgcgcgg ctggaagacc gccgacaaga
     1741 agccggtgaa gaacgccgag ctgtggcagc gcctcgacgc cgcccgtgcc gtccatcatg
     1801 tcgagtggca ctgggtgagg g
//
LOCUS       DATIKR010000184         2771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_148187, whole genome shotgun sequence.
ACCESSION   DATIKR010000184 DATIKR010000000
VERSION     DATIKR010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148187"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VLL76_02755"
     CDS             complement(<1..345)
                     /locus_tag="VLL76_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV28442.1"
                     /translation="MLKPLPTLRQLRYLVALAEHLHFGRAAEECLATQSTLSAGLQEL
                     ETLLGATLVERTRRKVMLTPLGEDVVARARVLLRGAEDIVDLVAASRRPLTGRLRLGV
                     IPTIGPYLLPRVL"
     gene            510..2012
                     /locus_tag="VLL76_02760"
     CDS             510..2012
                     /locus_tag="VLL76_02760"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HSV28443.1"
                     /translation="MGIVAAFAALTWSDHVSTRRGAEAGLMEVARLMEEHTRSAMLSG
                     SIQLNRVADLIGDRPLSALQGSETDWAALRRIMDDFPNSDSLWVFDPAANLVLSTLKP
                     AGVTLNVADREYFTAVHGGARLFISPMIWGKLYGGYYFAMSRPVDNPDGSLRGVVQFS
                     IKTSYFSSFYRNLSPEDGASFTIFKDDATLVARYPEPPAGSHETVAKPTILQDHLAEA
                     DLGTYQVRSTFDGIERIYAYRRVSGHPLVVATGLPTKVVFKPWLDRTLRNGALAAATL
                     GAFLLIAWQLSRAFRREELERAKAQALLADRDVLFQEIHHRVKNNLQIISSFLTMQAI
                     KAGNAATAESFQQALDRIHSMGLVHQTLYEQKEAAEVSMDAYLRALAASVGQSYGAVG
                     REIEISVRTDGTRLNLDRAVPLALLANEALTNALKHAFPTASGGHIEMSLFAEGGRLS
                     FAVKDDGVGMAAGGSGGLGMHILNALARQLEGDLATTVDGGTRLQVTFPA"
     gene            2101..>2771
                     /locus_tag="VLL76_02765"
     CDS             2101..>2771
                     /locus_tag="VLL76_02765"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSV28444.1"
                     /translation="MYSKLEEARRIDILRRYAILDTPPEPTFDRIAWLAATHFGTPIG
                     TVTFIDETRQWFKAIHGATLRETCRSIAFCSHAIEQDAVMVVPDASADSRFADNPLVT
                     ADPHIRFYAGAPLCTQDGLKLGTVSVIDSVPHADLSPDQKRFLTELARLVVEELELRL
                     AAGDVAAEIERRRRIEAELQRSNDCFRLAMQHSPFCLFTQDTGYRYTWAINTPPPYTP
                     DKLIGR"
BASE COUNT          456 a          957 c          883 g          475 t
ORIGIN      
        1 cagcactcgc ggcagcagat aggggccgat ggtggggatg acgcccagcc gcagccgtcc
       61 cgtcagcggc cgccgcgatg ccgccaccag atcgacgatg tcctcggcgc cgcgcagcag
      121 cacgcgggcg cgcgccacca cgtcctcgcc cagcggggtc agcatgacct tgcggcgggt
      181 gcgctcgacc agggtggcgc ccagcagggt ttcaagctcc tgcaggccgg ccgagagggt
      241 ggattgggtc gccaggcatt cctcggcggc gcggccgaaa tgcaggtgtt cggccagggc
      301 gaccagatag cggagctggc gcagggtggg caggggtttc agcatgggtc catcagatgc
      361 gtcgccgacc gataagtcaa ccatgccagc ctatccgttt ggtgtgcttg caagccatcc
      421 cggttacccg ttaagtgatg gtccgaccat ttgatgaatg cggcatgcgc ccggcacgtc
      481 tcctccatgt cttcaccctg gccgtatccg tgggcatcgt tgcggccttc gccgcgctga
      541 cgtggtccga ccacgtctcg acccgtcggg gcgccgaggc cggacttatg gaagtggccc
      601 gtttgatgga ggagcatacc cgctccgcca tgctgtctgg cagcattcag ctcaaccgcg
      661 tcgccgactt gatcggcgac cggccgctgt cggcgctgca ggggtccgag acggattggg
      721 cggccctgcg ccggatcatg gatgacttcc ccaattctga ttcgctctgg gtcttcgacc
      781 ctgccgccaa cctggtgctg tcgaccctga agccggccgg cgtcaccctc aacgtcgccg
      841 accgcgagta tttcacggcg gtgcacggcg gtgcccggct gttcatcagc ccgatgatct
      901 ggggcaagct ttacggcggt tactattttg ccatgagccg gccggtggac aatcccgacg
      961 gcagcctgcg cggtgtcgtc cagttttcca tcaagacctc gtatttctcc agcttctacc
     1021 gcaacctcag tcccgaggac ggcgcgtcct tcaccatctt caaggacgac gcgaccttgg
     1081 tcgcccgcta tcccgaaccg ccggccggca gtcatgagac cgtggccaag ccgacgatcc
     1141 tgcaagacca tttggcggag gccgatctcg gcacctatca ggtgcgctcg accttcgacg
     1201 gcatcgagcg catctacgcc taccgccggg tcagcggcca tccgctggtg gtggcgaccg
     1261 gattgccgac caaggtggtg ttcaaaccgt ggctggaccg caccctgcgc aacggcgccc
     1321 tggcggcggc gaccctgggc gccttcctgc tgatcgcctg gcaattgtcg cgcgccttcc
     1381 gccgcgagga gctggaacgc gccaaggcac aggcgctgct ggccgatcgc gacgtgttgt
     1441 tccaggaaat ccaccaccgg gtgaagaaca atctgcagat catctccagc ttcctgacca
     1501 tgcaggcgat caaggccggc aacgccgcca ccgccgaaag cttccagcag gcgctggacc
     1561 gcatccattc catggggctg gtgcatcaga cgctgtacga gcagaaggaa gcggccgagg
     1621 tgtccatgga cgcctatctg cgggcgttgg cggccagcgt cgggcagtcc tatggggcgg
     1681 tggggcggga aattgagatc agcgtgcgca ccgacggcac ccgcctgaac ctggaccgcg
     1741 ccgtgccgct ggcgctgctg gccaacgagg cgctgaccaa cgccctgaaa cacgcttttc
     1801 cgaccgcctc gggcggccat atcgagatga gcctgttcgc cgaaggcggg cggctgagct
     1861 tcgcggtcaa ggatgacggc gttggcatgg cggccggcgg ttcgggcggg ctgggcatgc
     1921 acatcctcaa cgccctggcg cgccagttgg aaggcgacct cgccaccacc gtcgatggcg
     1981 gcacccgcct gcaggtgacc ttccccgcat aacacttcgg aggcattctc cccacggtgc
     2041 agggttgccg gacgcctata cccgccacat aagcgtgaac gcctttgtgt ggattagtgc
     2101 atgtattcca aactggaaga ggcccggcgg atcgatatcc tgcgccgcta cgccatcctc
     2161 gacaccccgc ccgaaccgac cttcgaccgt atcgcgtggc tggcggcgac ccatttcggc
     2221 acccccatcg gcaccgtcac cttcatcgac gagacccgcc agtggttcaa ggccatccac
     2281 ggtgccaccc tgcgcgagac ctgccgctcc atcgcgttct gcagccacgc catcgagcag
     2341 gacgcggtca tggtggtgcc cgacgccagt gccgacagcc gcttcgccga caacccgctg
     2401 gtcaccgccg atccccatat ccgcttctac gccggggcgc cgctgtgcac ccaggacggc
     2461 ctcaagctgg gcacggtgtc ggtgatcgat tccgttccgc atgccgatct gtcgcccgac
     2521 cagaagcgct tcctgaccga actggcgcgg ctggtggtcg aggaattgga gcttcggctg
     2581 gcggcgggcg acgtggcggc cgagatcgag cggcgccggc gtatcgaggc ggaattgcag
     2641 cgcagcaacg actgcttccg ccttgccatg cagcacagcc cgttctgcct gttcacccag
     2701 gacaccggct atcgctacac ctgggccatc aacacgccgc cgccctatac ccccgacaag
     2761 ctgatcggcc g
//
LOCUS       DATIKR010000185         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_27032, whole genome shotgun sequence.
ACCESSION   DATIKR010000185 DATIKR010000000
VERSION     DATIKR010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27032"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..669
                     /locus_tag="VLL76_02770"
     CDS             163..669
                     /locus_tag="VLL76_02770"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008263 - pyrimidine-specific mismatch
                     base pair DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mismatch-specific DNA-glycosylase"
                     /protein_id="HSV28445.1"
                     /translation="MIVPDVLQPGLALVLCGTAPSRASKEARAYYAHPGNIFWQTLHQ
                     VGLTPRLLAPHEYPLMPTFGIGLTDLNKTEWGADAELSHDGFDVASFTAKMLRHRPGL
                     IAFDSKFAACKFFGRRTVAYGLQPETMDGIPLFVAPSTSGRARMYFDIGPWTVLGTLV
                     GEWRRRHA"
     gene            768..>1713
                     /locus_tag="VLL76_02775"
     CDS             768..>1713
                     /locus_tag="VLL76_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28446.1"
                     /translation="MSTYTEWTLPLNPPNPYPYYLHSLAPMAKQTLYYTKYILGVVGE
                     LDTKTDRVREWTCPPFSARTPTTNLTRIAADTASVWCVAQDYNGALIHFDPAHDTFTR
                     WATRRVSTALVNPIDLDVGDKDIWYIAGGTTSTIARFDKATGHVVSWGIPVGSMLNLS
                     SIAVDRVKKRVWVSSIDPNYGSQRAWIGCLDLTDGVLICYYPNPYGTNSPRSARVVVD
                     GDHVWFTAAKASGANTTVPAIYRMDRAGNALQFLVNTDSWPRHIAIEGGKAAWVTDIG
                     NSAFVRCDPGNSCDKVVFAKAVFKVKQVEFDLAPTKRAV"
BASE COUNT          289 a          596 c          547 g          281 t
ORIGIN      
        1 ggtgcgcgct gccaccgcgg cgggaatacc ggtcgtggtg accgaaagcg tctataccgc
       61 cggcgacgac ttcaccggcg ccctggccgt ggtgcccgac ctgggtgacg tgccgttcga
      121 gcgcttgtgc gggctgtacg ccgaacggta gcctgagggg gcatgatcgt ccccgacgtc
      181 ctccagccgg gcctcgccct ggtgctgtgc ggcaccgccc ccagccgggc ctcgaaagag
      241 gcccgggcct attacgccca tcctggcaac atcttctggc agaccctgca ccaggtcggc
      301 ctgacgccgc gcctgctggc gccgcacgaa tacccgctga tgcccacttt cggcatcggc
      361 ctgaccgacc tcaacaagac cgaatggggc gccgacgcgg aactgagcca cgacggcttc
      421 gacgtggcgt cgttcaccgc caagatgctg cgccatcgcc ccggcctgat cgcgttcgac
      481 agcaagttcg ccgcctgcaa attcttcggc cgccgcaccg tcgcctacgg cctgcaaccc
      541 gagacgatgg acggcatccc gctgttcgtg gcgccatcca cctcggggcg ggcgcggatg
      601 tatttcgata tcgggccgtg gacggtcttg ggcacgctgg tcggagaatg gcgccggcgc
      661 cacgcatagg ttgcccaacc ccggattgac ttcgccatgc aagggagcga ccctcctgta
      721 tccgtcgcgc gcgggggcgc gcggccacga cgtggggggg acaccgcatg agcacttaca
      781 ccgaatggac gctgccgctc aatccgccga acccgtatcc gtattacctg cattcgctgg
      841 cacccatggc gaagcagacg ctctattaca ccaagtacat ccttggcgtg gtcggtgagt
      901 tggacaccaa gacggatcga gtgcgggaat ggacctgtcc gccgttctcg gcgcgcacgc
      961 cgaccaccaa cctgacgcgg atcgccgccg acaccgcgtc ggtgtggtgc gtcgcccagg
     1021 attacaacgg cgcgctgatc cacttcgacc cggcccatga cacgttcacg cgctgggcca
     1081 cgcgacgggt ttcgaccgcc ttggtcaacc cgatcgacct ggatgtcggc gacaaggaca
     1141 tctggtacat cgccggcggg acgacctcca ccatcgcacg cttcgacaag gcgaccgggc
     1201 acgtggtgtc gtggggcatc ccggtgggtt cgatgctgaa cctgtcgtcg atcgcggtgg
     1261 accgggtgaa gaagcgggtg tgggtcagct cgatcgatcc caactacggc tcgcaacgcg
     1321 cctggatcgg ttgcctcgac ctcaccgacg gggtgctgat ctgctattac ccgaacccct
     1381 atgggaccaa ctcgccacgg tcggcgcgcg tggtggtcga cggcgaccac gtctggttca
     1441 cggccgccaa ggccagcgga gccaacacca ccgttcccgc catctaccgc atggaccgcg
     1501 ccggcaacgc cttgcagttc ctggtcaaca ccgacagttg gccccggcat atcgccatcg
     1561 agggcggcaa ggcggcctgg gtgaccgaca tcggcaacag cgccttcgtc cggtgcgacc
     1621 ccggcaactc ctgcgacaag gtcgtcttcg ccaaggcggt cttcaaggtg aagcaggtgg
     1681 aattcgacct ggctcccacc aagcgggcgg tga
//
LOCUS       DATIKR010000186         1976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_196380, whole genome shotgun sequence.
ACCESSION   DATIKR010000186 DATIKR010000000
VERSION     DATIKR010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196380"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1218)
                     /locus_tag="VLL76_02780"
     CDS             complement(<1..1218)
                     /locus_tag="VLL76_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV28447.1"
                     /translation="MTTAPATVVKTVLVVEDNPGDARLVEVFLLEDPARPFRVIKAVS
                     LSEALTALDRQPVDVVLLDLSLPDSFGLDTLGRLRAAQPLLPVVVLTGNNDEALALEA
                     LRQGAQDYLVKGQGDGDLVRRAIRYAIERSQVDQILRDSEARFRAVFQHAGVGVVLSE
                     PDGTFVEANPAFCAMVGYGQDELRGMNFQSITHPEDAPENERLRAEMADHRRDTYHMT
                     KRYLSKDGRVVWGRLMVKAIHEENSSEVRFIVAVVEDITERKRLEDHMRLAATVFENT
                     GEGLFVTDAQERIIHVNPAFTEITGYELDDVVGKTPKVLSSGRHGAEFYNRMWQAIQD
                     GGKWQGEIWDRRKSGEMFACWVNIAAVRNGGGEVSHYVAVFSDITSKKQIEERLSYQA
                     NHDPLTRLPNRTLF"
     gene            complement(1215..1655)
                     /locus_tag="VLL76_02785"
     CDS             complement(1215..1655)
                     /locus_tag="VLL76_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28448.1"
                     /translation="MRSAPETFDILLVEDNPGDARLAQEALKEGRMPSRLKVVVDGVE
                     AMTYLRREGGYGEAPRPHLVLLDLNLPRKDGRQVLAEMKADPDLRRIPVVVLTTSQAD
                     QDILRSYDLHANCYITKPVDLDRFISVVRSIEEYWCSVVTLPPR"
     gene            1842..>1976
                     /locus_tag="VLL76_02790"
     CDS             1842..>1976
                     /locus_tag="VLL76_02790"
                     /inference="COORDINATES: protein motif:HMM:NF016261.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HSV28449.1"
                     /translation="MTFPATDAEGYLIEPAEWDEEVAAELARREDIALTDEHWLAIRF
                     M"
BASE COUNT          339 a          628 c          666 g          343 t
ORIGIN      
        1 gaacagggtg cggttgggca gccgggtcag cgggtcgtgg ttggcctgat aggacagccg
       61 ctcctcgatc tgcttcttcg aggtgatgtc gctgaacacc gccacgtagt ggctgacctc
      121 gccgccgccg ttgcgcaccg ccgcgatgtt gacccagcag gcgaacatct cgcccgactt
      181 gcggcggtcc cagatctcgc cctgccactt gccgccgtcc tggatggcct gccacatgcg
      241 gttgtagaat tcggcgccgt ggcggcccga cgacagcacc ttgggcgtct ttccgaccac
      301 gtcgtccagt tcgtatccgg tgatctcggt gaaggccggg ttgacgtgga tgatgcgttc
      361 ctgggcatcg gtgacgaaca ggccctcgcc ggtgttctcg aacacggtgg cggccaggcg
      421 catgtggtct tccaggcgct tgcgctcggt gatgtcctcg accaccgcga cgatgaagcg
      481 gacctcggac gagttctcct cgtggatcgc cttgaccatc agccggcccc aaacgacgcg
      541 gccgtccttg gacaggtagc gcttggtcat gtggtaggtg tcgcgccgat ggtccgccat
      601 ctcggcgcgc agccgctcgt tttccggcgc atcctcggga tgggtgatgg attggaagtt
      661 catgccgcgc aattcgtcct ggccatagcc gaccatggcg cagaacgcgg gattggcctc
      721 gacgaaggtg ccgtccggtt cggacagcac gacgccgacg ccggcatgct ggaacacggc
      781 gcggaaccgt gcctcggaat cgcgcaggat ctggtcgacc tgcgaacgtt cgatggcgta
      841 gcggatggcg cggcggacaa ggtcgccgtc gccctggccc ttgaccagat agtcctgggc
      901 gccctggcgc agcgcttcca gcgccagcgc ctcgtcgttg ttgccggtca gcaccaccac
      961 cggcagcagc ggctgggcgg cgcgcagccg gcccagggtg tcgaggccga aggaatcggg
     1021 aagcgacagg tcgagcagca cgacgtcgac cggctggcgg tcgagcgccg tcagggcctc
     1081 ggacaagctg accgccttga tgaccctgaa cggtcgggcc gggtcttcga gcaggaacac
     1141 ttcgacgagg cgggcgtcgc cggggttgtc ctcgacgacc agtacggtct tcaccaccgt
     1201 ggcaggggcc gtcgtcatct gggcggcagg gtaaccaccg aacaccagta ttcttcgatg
     1261 gaccggacca ccgagatgaa gcggtccaga tcaaccggct tcgtgatgta gcaattggcg
     1321 tggaggtcgt agctgcgcag gatgtcctgg tcggcttgcg acgtggtcag caccaccacg
     1381 gggatacggc gcagatcggg gtcggccttc atttcggcca gcacctggcg gccgtccttg
     1441 cgcggtaggt tgaggtcgag cagcaccaga tgcggccgcg gcgcctcgcc atagccaccc
     1501 tcgcgccgca ggtaggtcat ggcttcgacg ccatcgacca ccaccttcaa gcggctcggc
     1561 attcgacctt ccttgagggc ctcctgggcc aaccgggcat cgccagggtt gtcctcgacc
     1621 agcagaatgt cgaacgtttc gggtgcgctg cgcatgctca cggccaaagg gctcctgacg
     1681 gatgaagacg ccgttgcgct cactataagg cccaaacttg ttgggggaaa ggcccgatac
     1741 gccatttgga tgggaatgag gagggttgac cgccgtcaag ggaagcagaa cataagaaaa
     1801 cgatcatgga ccaaccccaa ccagcatagg gagcgcgccc catgaccttc cccgccaccg
     1861 acgccgaagg ctacctgatc gagccggccg agtgggacga agaggtcgcc gccgaactgg
     1921 cccggcgcga ggatatcgcc ttgaccgacg agcattggct ggcgatccgg ttcatg
//
LOCUS       DATIKR010000187         2985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_27049, whole genome shotgun sequence.
ACCESSION   DATIKR010000187 DATIKR010000000
VERSION     DATIKR010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27049"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2737
                     /gene="tssF"
                     /locus_tag="VLL76_02795"
     CDS             <1..2737
                     /gene="tssF"
                     /locus_tag="VLL76_02795"
                     /inference="COORDINATES: protein motif:HMM:NF017733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HSV28450.1"
                     /translation="KVARALELGREGSADPQVERLIESFAFLTARIQRELDANFPVVP
                     SALLSVLYPHLTAPVPSLSIAQFRPDPNHGRALMGVEVPRHTRLFAQAADDVTCRFRS
                     CYPVTLWPLTVADADIRRTAAYPFLDNSSEVAAVLRLKLDCLGKRSFAEFQPESLRLF
                     IDADTAQATQIYEMLMNRMAGIAVLPEGASQPTAILPPSSIRPVGFAADESVLPHPVT
                     AHQGYRLLQEYFVFPEKYLFLDVAGLAGHLGDGRSCELVFLLEARPRAGLVLGRDNFR
                     LGCTPIVNLFTRTSEPLRLDHTQPEYRLMPDVRWERATEIHTILKVSATSAPEDDSQV
                     IQPLFSYTHGQPKASVFWMARRRDTGRDDLPGTDVLLSFKDLGLRPGLPDSKVVFAHV
                     LCTNRGIAEEMPAGTPLEMELSAPAAGISALRRPTRQLSPPPEGEGLWRLVSHLSLNH
                     LSLAGGPRKPGRPEGNPAPLCLRRRRPPADRRLGRAGDPPGGAPHRRRCLARLLPGHR
                     GHPDLGRNARGRRLVLPVHRRPGPFPRALRRRQHLHPAGGEKPPARPRVDLMAPPVRR
                     SDRPLIERLAAEPQRFDFNQALAILEAAAPGCVPVGEGRDPAREAVRLRGWIGREFPA
                     SDVADFKPATKGEPQELTVAFLSLAGAFGPLPPPMSELVLERHRRHDDANRDFLDVFN
                     HRLLSIWARAKRTHVPTLQKGRPDETGFAAMVMALLGLGTEGLRTSLDREARSRLHGF
                     ERALLEPAALMNQRPVSLHAVEALVAHYLSLPVKGTPLVGRWLNLEADQTTVIGKGGR
                     NAVLGQGAVLGTKVWDQAAAIRLEIGPLTLGRMIGLLPGGDANRAVHTLLGYALGGST
                     DVEMKLVMPPRQVPPTRLTANRKRRPARLGQTSWLTTRPRKEPGIVTLRLGAPGS"
     gene            2734..>2985
                     /locus_tag="VLL76_02800"
     CDS             2734..>2985
                     /locus_tag="VLL76_02800"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HSV28451.1"
                     /translation="MKHHAPPPTGFGAAAPHGQARAIQGYFPGGRMTIQAKTQGNATQ
                     LPNSFRLPAGGQPLPEAVRSKMEGFFKADFSRVRVHVGPE"
BASE COUNT          423 a         1133 c          988 g          441 t
ORIGIN      
        1 caaggtggcg cgcgcgctgg aactggggcg cgaggggtcg gccgaccccc aggtcgagcg
       61 gctgatcgaa agcttcgcct tcctgaccgc ccgcatccag cgcgagctgg acgccaattt
      121 cccggtggtg cccagcgcgc tgctgtcggt gctgtacccg cacctgaccg cgccggtgcc
      181 gtcgctgtcc atcgcccagt tccgccccga ccccaatcac ggccgcgcct tgatgggggt
      241 cgaggtgccg cgccacaccc gcctgttcgc ccaggcggcg gacgacgtga cctgccgctt
      301 ccggtcgtgc tatccggtga cgctgtggcc gctcacggtg gccgatgccg acatccgccg
      361 caccgccgcc tatcccttcc tggacaattc cagcgaggtc gccgccgtgc tgcggctcaa
      421 gctggactgc ctgggcaagc gcagcttcgc cgagttccag cccgagtccc tgcgcctgtt
      481 catcgatgcc gacacggcgc aggcgacgca gatctacgag atgctgatga accggatggc
      541 cggcatcgcg gtactgcccg aaggcgccag ccagcccacc gccatcctgc cgccgtccag
      601 catccgcccg gtcggcttcg ccgccgacga atcggtgctg ccccaccccg tcaccgctca
      661 ccagggctat cgcctgctgc aggaatactt cgtcttcccc gagaagtacc tgttcctgga
      721 cgtcgccggc ctggccgggc atctgggcga cggccgctcg tgcgagctgg tgttcctgct
      781 ggaagcccgc ccgcgcgccg ggctggtgct ggggcgggac aatttccgcc tgggctgcac
      841 ccccatcgtc aacctgttca cccgcaccag cgagccgctg cgcctggacc acacccagcc
      901 ggaataccgg ctgatgccgg acgtgcggtg ggaacgcgcc accgagatcc acaccatcct
      961 gaaggtgtcg gcgacctcgg cgcccgagga tgacagccag gtgatccagc cgctgttctc
     1021 gtacacccac ggccagccca aggcgtcggt gttctggatg gcgcggcggc gcgacaccgg
     1081 ccgcgacgac ctgccgggca ccgacgtgct gctgtcgttc aaggatctgg gactgcgccc
     1141 cggcctgccc gacagcaagg tggtgttcgc ccatgtgctg tgcaccaacc gcggcatcgc
     1201 cgaggaaatg ccggccggca ccccgctgga aatggaattg tcggcccccg ccgccggcat
     1261 ctcggcgctg cggcggccga cccgccagtt gtcgccgccg cccgagggcg aagggttgtg
     1321 gcggctggtg tcgcatctgt cgctgaacca cctgtccctg gcgggggggc cgcgaaagcc
     1381 tggacgccct gaaggaaatc ctgcgcctct atgcctccgc cgccggcgac caccagcaga
     1441 tcgacgcctt ggtcgagctg gagacccgcc gggtggtgcg ccgcatcggc gccgatgcct
     1501 ggcgcggctt ctgccggggc accgaggtca ccctgacctt ggacgaaatg cccgaggccg
     1561 gcgcctcgtc cttcctgttc accgccgtcc tggcccattt cctcgggctt tacgccggcg
     1621 tcaacacctt cacccagctg gtggtgaaaa gccgccagcg cgaccgcgtg tggatctcat
     1681 ggccccccct gtccggcgaa gcgatcgtcc tctgatcgag cggctggcgg ccgagccgca
     1741 gcgcttcgat ttcaaccagg cgctggccat cctggaggcc gccgcccccg gctgcgtgcc
     1801 ggtcggcgag ggccgcgatc cggcgcgtga ggcggtgcgc ctgcgcggct ggatcggccg
     1861 cgagttcccg gccagcgacg tggcggattt caagcccgcc accaaaggag aaccgcagga
     1921 gctgaccgtc gccttcctgt cgctggccgg cgccttcggc ccgctgccgc cgccgatgtc
     1981 cgagctggtg ctcgagcgcc accggcgcca tgacgacgcc aaccgcgact tcctcgacgt
     2041 gttcaaccac cgcctgctgt ccatctgggc ccgggccaag cgcacccacg ttcccaccct
     2101 gcagaagggc cgccccgacg agaccggttt cgccgccatg gtgatggcgc tgctgggcct
     2161 ggggaccgag ggactgcgca ccagcctgga ccgcgaggcg cggtcgcggc tgcacggctt
     2221 cgagcgggcg ctgctggagc cggcggcgct gatgaaccag cgcccggtca gcctgcacgc
     2281 ggtcgaggcg ctggtggcgc attacctgtc gctgccggtc aagggcaccc cgctggtggg
     2341 ccgctggctg aacctggagg ccgaccagac caccgtgatc ggcaagggcg gccgcaacgc
     2401 cgtactgggc caaggcgccg tgctgggcac caaggtttgg gaccaggccg ccgccattcg
     2461 cctggaaatc gggccgctga ccctgggccg catgatcggc ctgttgccgg gcggcgacgc
     2521 caaccgcgcc gtccacaccc tgctgggcta cgccctgggc ggctcgaccg acgtcgagat
     2581 gaagctggtg atgccgcccc gccaggtgcc ccccacccgc ctgaccgcca accgcaaacg
     2641 ccgcccggcc cgcctgggcc aaaccagttg gctgaccacc cgcccgcgca aggagccagg
     2701 catcgtcacc ctgcgcctgg gagcgcccgg atcatgaagc atcacgcccc gccgcccacc
     2761 ggcttcggtg ccgccgctcc ccatgggcag gcgcgcgcga tccagggcta tttccccggc
     2821 ggccgcatga ccatccaggc caagacccaa ggcaacgcga cccaattgcc gaactcgttc
     2881 cgcctgccgg ccggcggcca acctctgccc gaggcggtgc gcagcaagat ggagggcttc
     2941 ttcaaggccg atttcagccg cgtccgcgtc catgtcggac ccgag
//
LOCUS       DATIKR010000188         3277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_2927, whole genome shotgun sequence.
ACCESSION   DATIKR010000188 DATIKR010000000
VERSION     DATIKR010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2927"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VLL76_02805"
     CDS             complement(<1..350)
                     /locus_tag="VLL76_02805"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28452.1"
                     /translation="MAVMDLVDDSTVGGIEADLAHVAELRAAGSAREAMMALLPVLNA
                     HPTNARARLEMAGVLADLGRPDEALSLYALLARRPDAPAAAWEGLADLLTKGGQDAAA
                     QACLRRAVAIAPGRT"
     gene            complement(420..1970)
                     /locus_tag="VLL76_02810"
     CDS             complement(420..1970)
                     /locus_tag="VLL76_02810"
                     /inference="COORDINATES: protein motif:HMM:NF019205.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HSV28453.1"
                     /translation="MSPLSPPHRRRAGAELAIAWLSLFGLFAVVALFAFSIARDREDL
                     IAAAVDRGRLESVLLADHAARLLEGADLALLTTIDDIRGLNRAEVSASRRLHDRFQRL
                     ADRLPFVEAIWFHGADGALWLTSLAFPAPPNDVSTADFHTIHRQDDRGVFVSALVGNS
                     FRLSRRIETARGDFKGVASLTVDAGFFRRAYGTLGLPPGSTVTLLNARTLSPLVQIPE
                     AKVEGATFHDVARLRQSIDVNSEQGTFRSISPIDRLERVYAYRKVPAFPLYLKVSVPL
                     TTINDQWARQVRDRIATALGAIAGLGVLTWLGFRQAGQQRRFQESLSSRVMERTAQLE
                     HAIQEVHHRVNNNLQIVGTLLTVQMHRVTDPLVRAALAEGVGRVSTIGLAHRVVYGNG
                     AVTQLAFGDYLRSLAGQMADLYGFGTGAVEVAGDNPALPLETAVPLALMVHEVLAPGM
                     RGGRRVRVELRADGPMWHLSATGLTPAADSMSGDIVGLLAGQLGAEIRSLPAPDGTVT
                     FTASWPAA"
     gene            complement(2011..2415)
                     /locus_tag="VLL76_02815"
     CDS             complement(2011..2415)
                     /locus_tag="VLL76_02815"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28454.1"
                     /translation="MTQPAAAASSLLPDGAIPRIMVIEDEPLIAMGLKMVLENMGCEV
                     PITVDNAADAVAHAQSQPFDLILADVRLKGAEDGISAIERILMDRKVRVLFVTGNASE
                     VANRGMGHIDVLSKPFMPAALERSVRAILSRR"
     gene            2586..>3277
                     /locus_tag="VLL76_02820"
     CDS             2586..>3277
                     /locus_tag="VLL76_02820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV28455.1"
                     /translation="MTVLVTGAAGFIGSTTSLRLLARGEQVVGVDDMNAYYDPVLKEA
                     RLARLREHKNFRFFKADIADRAAMAEVGRQTPDVTRVINLAAQAGVRHSLTHPHDYTR
                     ANVEGHLVMLELARHAWKTEHFVYASSSSVYGSNTKMPFSVDDRVDSPISLYAATKRC
                     GELMSHTYSHLYRLPTTGLRFFTVYGPWGRPDMAAFLFAKAIMAGQPIRVFNNGDMRR
                     DFTYIDDIVEGVV"
BASE COUNT          537 a         1074 c         1160 g          506 t
ORIGIN      
        1 gtccgccccg gcgcgatggc gacggcgcgc cgcaggcagg cctgggcggc ggcgtcctgg
       61 ccgcccttcg tcagcagatc cgccaggcct tcccaggcgg cggcgggggc gtcggggcgt
      121 cgggccagca gggcataaag cgacagggct tcgtcggggc ggccgagatc ggccagcacg
      181 ccggccatct ccagccgggc ccgggcgttg gtcgggtggg cgttcagcac gggcagcaac
      241 gccatcatgg cctcgcgcgc gctgccggcg gcgcgcaatt cggccacatg ggccaagtcg
      301 gcctcgatgc ccccgacggt cgaatcgtcg accaggtcca tgaccgccat gccgctcccc
      361 gaatggatct ccctgtgacg agtcaaacgc gggacggggg gtgggtcaag tgcaaacgat
      421 catgccgccg gccacgaggc ggtgaaggtg acggtgccgt ccggggccgg cagcgaccgg
      481 atctcggcgc ccaactggcc ggccagcagg ccgacgatgt cgcccgacat ggaatcggcg
      541 gcgggcgtca ggccggtggc cgacaggtgc cacatcgggc cgtcggcgcg cagttcgacc
      601 cggacgcgac ggccgccgcg catgcccggc gccaatacct cgtgcaccat cagcgccagc
      661 ggcacggcgg tttccagcgg cagtgccgga ttgtcgccgg cgacctcgac ggcgccggtg
      721 ccgaagccgt agaggtcggc catctgcccc gccagactgc gcaggtaatc cccgaatgcc
      781 agttgcgtga ccgcgccgtt gccgtacacc acccggtggg ccaggccgat ggtgctgacc
      841 cgcccgacac cctcggccag ggcggcgcgc accagcgggt cggtcacccg gtgcatctgc
      901 acggtcagca acgtgcccac gatctgcagg ttgttgttga cccgatggtg gacctcctgg
      961 atggcgtgct ccagttgggc ggtgcgttcc atcacgcggc tgctcagcga ttcctggaac
     1021 cggcgctgct ggccggcctg gcggaagccc agccaggtca gcacgcccag gccggcgatg
     1081 gcgccaaggg cggtggcgat ccggtcgcgc acctggcggg cccattggtc gttgatggtg
     1141 gtcagcggca cgctgacttt caggtaaagc ggaaaggcgg gaaccttgcg gtaggcgtag
     1201 acgcgttcca ggcgatcgat gggggagatg ctgcggaacg tgccttgctc gctgttgaca
     1261 tcaattgatt ggcgcagcct ggcgacatcg tggaaggtgg caccttcgac cttggcttcc
     1321 ggaatttgta ccagcggcga cagggtgcgg gcgttgagga gggttacggt gctgcccggc
     1381 ggcagcccga gcgttccgta cgcgcgcctg aagaaacccg catcgacggt cagcgaggcg
     1441 acccccttga agtcgccgcg cgcggtctcg atgcggcggc tgaggcggaa cgagttgcct
     1501 accagggcgc tgacgaagac gccccggtcg tcctggcggt ggatcgtgtg gaagtcggcc
     1561 gtcgaaacgt cgttgggcgg tgcggggaat gccaggctgg tcagccacag ggcgccgtcg
     1621 gcgccgtgga accagatggc ctcgacgaag ggcaggcggt cggccaggcg ttggaagcgg
     1681 tcgtgcagcc gccgcgaggc ggaaacctcg gcgcggttca agccgcggat atcgtcgatc
     1741 gtcgtcagca gcgccagatc ggcgccttcc agcaggcggg cggcgtggtc ggccagcagc
     1801 accgattcca gccggccgcg atcgacggcc gcggcgatca ggtcctcgcg gtcgcgggcg
     1861 atgctgaagg cgaacagggc cacgacggcg aacagcccga acaggctcag ccaggcgatc
     1921 gcgagttcgg ctcccgcacg ccgccggtgg ggcggggaca acggcgacac atgacctccc
     1981 tgaccggatg ccggacgggt aagtcaacac ctagcggcgg gagaggatcg cgcggaccga
     2041 acgttccagg gcggcgggca tgaagggctt ggacagcacg tcgatgtgtc ccatgccccg
     2101 gttggcgact tcgctggcgt tgccggtgac gaacagcacc cgcaccttgc gatccatcag
     2161 gatgcgttcg atggccgaga tgccgtcctc ggcgcccttg aggcggacgt cggcaaggat
     2221 caggtcgaac ggctgcgatt gcgcatgggc gacggcgtcg gcggcgttgt cgacggtgat
     2281 cggcacctcg caccccatgt tctcgagcac catcttcaag cccatggcga tcaggggctc
     2341 gtcctcgatg accatgatgc ggggaatggc gccgtctggc agcagcgacg aagctgcggc
     2401 ggcgggttga gtcaccgttt cgtcctcccg tccatcttcg gccatgatgg aagctataga
     2461 gccaaatctc aagccaaagg tggtgttcat tgtggctatg gacgaggcaa gacggaaaaa
     2521 cgggggatga tttccgcagg cgtccaaggt atatcagggc ggcgaaataa gaggggttcg
     2581 tccgcatgac cgttctcgtc accggtgccg ccggcttcat cggatccacc acgtcgctgc
     2641 gcctgctggc gcggggcgag caggtggtcg gtgtcgacga catgaacgcc tattacgatc
     2701 cggtgctgaa ggaagcccgg ctggcgcgcc tgcgcgagca caagaacttc cgcttcttca
     2761 aggccgacat cgccgaccgc gccgccatgg ccgaggtcgg ccgccagacc ccggacgtca
     2821 cccgcgtcat caaccttgcc gcccaggccg gcgttcgcca ttcgctgacc catccccacg
     2881 actacactcg cgccaacgtc gaggggcatc tggtgatgct ggaactggcg cggcacgcct
     2941 ggaagaccga acatttcgtc tacgccagtt cgtcgtcggt ctatggctcg aacaccaaga
     3001 tgccgttctc ggtggacgac cgcgtcgaca gcccgatctc gctttatgcc gccaccaagc
     3061 gctgcggcga gctgatgagc cacacctaca gccatctgta ccgcctgccc acgacgggcc
     3121 tgcgcttctt caccgtctac ggtccgtggg gccgccccga catggcggcc ttcctgttcg
     3181 ccaaggcgat catggcgggc cagccgatcc gggtgttcaa caacggcgac atgcggcgcg
     3241 acttcaccta tatcgacgac atcgtcgagg gcgtggt
//
LOCUS       DATIKR010000189         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_159834, whole genome shotgun sequence.
ACCESSION   DATIKR010000189 DATIKR010000000
VERSION     DATIKR010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159834"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..775
                     /locus_tag="VLL76_02825"
     CDS             <1..775
                     /locus_tag="VLL76_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28456.1"
                     /translation="FGVPVYPGDTLTTVSTVIGLKENSNKQTGVVYVRSVGTNQRGEM
                     VVDYVRWVMVRKRDTGAAIAEEKVPELPGSVAAADLVIPAGLDAAKYDDVLAGSPHRW
                     DDYAVGEKIDHVDGMTIEEAEHMMATRLWQNTAKVHFNQHTEGQGRFGRRLIYGGHII
                     SMARALSFNGLGNAFKVVAINGGRHTNPTFAGDTIYAWSEVLEKLEIPGRTDVGALRL
                     RLVALKNQPAAGFPLKKEDGKEYDPAVVLDFDYTVLVPR"
     gene            900..>2205
                     /locus_tag="VLL76_02830"
     CDS             900..>2205
                     /locus_tag="VLL76_02830"
                     /inference="COORDINATES: protein motif:HMM:NF037144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-95 repeat protein"
                     /protein_id="HSV28457.1"
                     /translation="MLDERNPNTTTRPAGADEARQDLDDLTVLGKIGDTNLGEPRLNL
                     ARGGEADESKLGSLATIHQGSRGAPEVTDMTGLMTGGGVAVATDVAVEGGRVARTEVA
                     GLETGGGDGGEVTGSAEMRSQTVEPTRTAWTPEFFAASGESRPSGGVAAADAPLFAAS
                     MIGGEGGGSAPAMVMPSEDNPVMAVLPEPTLEPDTEDEEEDEPIVTDDDVNAAPVVIG
                     VTGGVGVEDHEVTGAVLASDADGDRLTYAIAEDGAPLHGSLVLGLDGAYTYLPAPDWS
                     GTDAFTVIVSDGHGGTVTRTVTVEVAADNDVPVVTGIVGGSGLEDHVVTGRVVVADVD
                     GDGLSYALAEGGAPAHGTVAFAADGSYAYVPAEDWSGGDSFTVTVADGHGGSVTRTIA
                     VTVAPVADTPELAAGAGAGTMADDHDDLGAPTSDTIVLGHGGP"
BASE COUNT          357 a          770 c          771 g          307 t
ORIGIN      
        1 cttcggcgtg ccggtctatc ccggcgacac cctgaccacg gtgtccaccg tgatcggcct
       61 caaggagaat tccaacaagc agaccggcgt cgtctacgtc cgttcggttg gcaccaacca
      121 gcgcggcgag atggtggtgg actacgtccg ctgggtgatg gtcaggaagc gcgacaccgg
      181 cgccgccatc gccgaggaaa aggtccccga gctgcccggt tcggtcgccg ccgccgatct
      241 ggtgatcccc gccggcctgg atgccgccaa gtacgacgac gtgctggccg gctcgccgca
      301 ccgctgggac gattacgcgg tgggcgagaa gatcgaccac gtggacggca tgaccatcga
      361 ggaagccgag cacatgatgg cgacgcgcct gtggcagaac accgccaagg tgcatttcaa
      421 ccagcacacc gagggccagg gccgcttcgg ccgccgcctg atctatggcg gccacatcat
      481 cagcatggcc cgcgccctgt cgttcaacgg cctgggcaac gccttcaagg tcgtcgccat
      541 caacggcggc cgccacacca acccgacctt cgccggcgac accatctacg cctggtcgga
      601 agtgctggaa aagctggaaa tccccggccg caccgacgtc ggcgccctgc gcctgcgcct
      661 ggtcgccctg aagaaccagc cggcggccgg cttcccgctc aaaaaggaag acggcaagga
      721 atacgacccg gcggtcgtgc tcgacttcga ctacaccgtg ctggtgccgc gctgagtcca
      781 ccccgcagcc ctgcgccccc ggcatgggtc ggcatgccgg gctgtggtat gatgtgaatg
      841 ggaaggcccc ggacctcttt tgaggccggg gccttctggt tccggggatg gaggcggcca
      901 tgttggacga gcgcaacccc aataccacca cccgcccggc cggcgccgac gaagcgcggc
      961 aggatctcga cgacctgacg gttctgggca agatcggcga caccaacctg ggtgagccgc
     1021 gcctgaacct cgcccgtggc ggcgaggccg acgagtccaa gctgggttcg ctggccacca
     1081 ttcaccaggg atcacgcggc gcccccgaag tcaccgacat gaccggcttg atgaccggtg
     1141 gtggcgtggc ggtggcgacc gacgtcgcgg tcgagggcgg ccgtgtcgcc cgcacggaag
     1201 tcgccggatt ggagaccggc ggcggtgacg gcggcgaggt caccggcagc gccgagatgc
     1261 gctcgcagac ggtcgagccg acgcgtactg cctggacccc tgaattcttc gcggccagcg
     1321 gcgagtcgcg cccgagtggc ggcgtcgcgg ccgccgatgc gccgttgttc gccgcctcga
     1381 tgattggcgg cgagggcggc ggcagtgcgc ccgccatggt catgccctcc gaggacaacc
     1441 cggtgatggc ggtgctgccc gaaccaaccc ttgaaccgga caccgaggac gaggaagagg
     1501 atgagccgat cgtcacggat gacgacgtca acgccgcgcc cgtggtcatc ggcgtcaccg
     1561 gcggcgtggg cgtcgaggac catgaagtca ccggcgccgt gctggcctcg gacgccgacg
     1621 gcgaccgcct gacctatgcc atcgccgagg acggcgcgcc gctgcacggc tcgctggtgc
     1681 tcggcctcga cggcgcctac acctacctgc cggcgcccga ctggagcggc accgatgcct
     1741 tcaccgtgat cgtttccgac ggccatggcg gtacggtcac ccgcaccgtc accgtcgagg
     1801 tggccgccga caacgacgtg ccggtggtga ccggaatcgt gggcggcagc ggccttgaag
     1861 accatgtggt caccggacgg gtggtcgtgg ccgatgtgga cggcgacggc ctgagctatg
     1921 ccctggccga gggcggcgcc ccggcccacg gcacggtggc cttcgcggcc gacggcagct
     1981 atgcctatgt cccggccgag gattggagcg gcggcgattc cttcaccgtc accgtcgccg
     2041 acggccatgg cggcagcgtc acccgcacga tcgcggtcac ggtcgcgccg gtggccgaca
     2101 cccccgaatt ggccgccggg gcaggggcgg ggaccatggc ggacgaccat gacgatctcg
     2161 gcgcgcccac gtccgacaca atcgtgctcg ggcatggcgg cccgg
//
LOCUS       DATIKR010000190         2747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_196423, whole genome shotgun sequence.
ACCESSION   DATIKR010000190 DATIKR010000000
VERSION     DATIKR010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196423"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1080)
                     /locus_tag="VLL76_02835"
     CDS             complement(<1..1080)
                     /locus_tag="VLL76_02835"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004633909.1"
                     /note="catalyzes the conversion of citrate to isocitrate
                     and the conversion of 2-methylaconitate to
                     2-methylisocitrate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase B"
                     /protein_id="HSV28458.1"
                     /translation="MLEAYRQHVAERAALGIPPLPLSAKQTEDLVGLLKNPPKGEEAV
                     LVELLTYRVPAGVDDAAKVKADFLAAVAHGEQACALISKVKATELLGTMLGGFNILPL
                     IHLLKDAECGAAAAEGLKKTLLVFDYFHDVKELADKGNANAKAVLQSWADAEWFTSRP
                     AVPDSLTVTIFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRPGIEPDEAGARG
                     PVKQLEALKAKGNLVAYVGDVVGTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGT
                     KIAPIFYNTMEDAGALPIELDVNQMNMGDVVELRPYEGKALKDGKVIAEFTVKSDVIF
                     DEVRAGGRIPLIIGRGLTARAREALG"
     gene            1635..2321
                     /gene="ccmA"
                     /locus_tag="VLL76_02840"
     CDS             1635..2321
                     /gene="ccmA"
                     /locus_tag="VLL76_02840"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HSV28459.1"
                     /translation="MSPAMIADPVALFSGSKLACVRGGRIVFAGLDFTLAAGDALVLL
                     GPNGSGKSSLLRVLAGLLKPASGVLAWQGENVSDDPEAHAARSHYVGHHDAIKPVLSV
                     AENLRFWARLHEPHAPTATEAVETALDRFGLGHLRDIPGKMLSAGQKRRTNLARLLAA
                     PSPLWLLDEPITALDRKSIATLEAVFAEHRAGGGIVVLSTHADVDLPNARELHLDRFA
                     PEPDDDEDWA"
     gene            2318..>2747
                     /gene="ccmB"
                     /locus_tag="VLL76_02845"
     CDS             2318..>2747
                     /gene="ccmB"
                     /locus_tag="VLL76_02845"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HSV28460.1"
                     /translation="MSRFAEIVRRDLRLALRQGSDSIMVVTFFVLTVVLFPFGIGPES
                     GVLERISAGVLMVTALLASMLSLDRLFQADYEDGSLELLVLTPTPLEVVVAAKVAAHW
                     LTTGLPLLVAAPVLAVLLHMNSEGFGTLMLAMLLATPVLSL"
BASE COUNT          392 a          938 c          916 g          501 t
ORIGIN      
        1 ccccagggcc tcgcgcgccc gcgcggtcag gccgcggccg atgatcagcg gaatgcggcc
       61 gccggcgcgc acttcgtcga agatcacgtc ggacttgacg gtgaactcgg cgatgacctt
      121 gccgtccttc agcgccttgc cctcataggg acgcagctcg accacgtcgc ccatgttcat
      181 ctggttgacg tccagctcga tcggcagggc gccggcgtct tccatggtgt tgtagaagat
      241 cggggcgatc ttggtgccca ggcagacgcc gccgaagcgc ttgttgggga cgaacgggat
      301 gtcctcgccg gtgaaccaca gcaccgagtt ggtggcggac ttgcgcgagg agccggtgcc
      361 gaccacgtcg ccaacatagg cgaccaggtt gcccttggcc ttcagcgcct cgagctgctt
      421 gaccgggcca cgggcgccgg cctcgtcggg ctcgatgccg ggacgcgggt tcttcagcat
      481 ggccagggca tgcagcggga tgtcggggcg gctccaggcg tcgggggccg gcgacaaatc
      541 gtcggtgttg gtctcgccgg tcaccttgaa gatggtcacc gtcagcgagt ccggcaccgc
      601 cgggcgcgag gtgaaccact cggcgtcggc ccacgactgc agcaccgcct tggcgttggc
      661 gttgcccttg tcggccagct ccttgacgtc gtggaaatag tcgaacacca gcagggtctt
      721 cttcaggccc tcggcggcgg cggcgccgca ttcggcgtcc ttcagcaggt ggatcagcgg
      781 caggatgttg aagccgccca gcatggtgcc cagcagctcg gtcgccttga ccttcgagat
      841 cagcgcgcag gcctgctcgc catgggcgac ggcggccagg aagtcggcct tgaccttggc
      901 ggcgtcatcg acgccggccg gcacgcgata ggtcagcagc tcgaccagga ccgcttcctc
      961 gcccttgggc gggttcttca gcaggcccac caggtcttcg gtctgcttgg ccgagagcgg
     1021 caggggcggg atcccgaggg cggcacgctc ggcgacatgc tggcgatagg cttcaagcac
     1081 ggacatcctc cgcttggaca ggtgaaaggt gggcagccca ggctctcgcc gggcgacgat
     1141 ggggaaaggt gcgcgtgcgc ttacaccata atttccgcgc cgtgtctagc ccggctatcc
     1201 cttcgggcgg gttgttttcc acccacctac ccacgctcat catcgggtga tcgcccctta
     1261 actttcggcg aatatccatc tttacataaa ttcgccatat tcgccccgca agatccgaca
     1321 ctcaaaaggc ccccaaccat gccgccgggc ggataaatcc ccccttctca tcctccggcg
     1381 gaaagggtct cgacagccgg cgcgctcccc ctcgcgccgg ctgtttgttt attttggtcg
     1441 tgttcgcgtt tccatcgtca tcccgggcaa gcgaagcgcg acccgggatc caggagtcac
     1501 gggccccccc cctggcgtcc ctgcgcgcgg ctctggatcc cgggtcaagc ccgggatgac
     1561 gcctttcctt gcgcagtgcg cctcctcgct gcgctcgtcc ggaagccctg ggcaaacggc
     1621 tggatttctg ccatatgtcg ccggccatga tcgccgaccc agttgccctg ttctccggtt
     1681 ccaagctcgc ctgcgtgcgg ggcggacgga tcgtgttcgc cgggctggac ttcacgctgg
     1741 cggccggcga cgcgctggtt ttgctgggcc ccaacggctc gggcaagtcg agcctgttgc
     1801 gggtgctggc aggcctgctg aagccggcgt cgggcgtcct ggcctggcag ggcgagaacg
     1861 tgtcggacga ccccgaggcc catgccgccc gcagccatta cgtcggccat cacgacgcca
     1921 tcaagccggt gctcagcgtc gccgaaaacc tgcgcttctg ggcgcggctg cacgaacccc
     1981 atgcgcccac cgccaccgag gcggtcgaga ccgcattgga tcgtttcgga ctcggacatc
     2041 tgcgcgacat ccccggcaag atgctgtcgg ccggccagaa gcgccgcacc aacctggccc
     2101 gcctgctggc ggcgccgtcg ccgctgtggc tgctggacga accgatcacc gcgctcgacc
     2161 gcaaatccat cgcgacgctg gaggcggtgt tcgccgagca tcgcgcgggc ggcggcatcg
     2221 tggtgctgtc gacccatgcc gacgtcgacc tgcccaacgc gcgcgagctt cacctggacc
     2281 gtttcgcccc cgaaccggac gacgacgagg attgggcatg agccgcttcg ccgagatcgt
     2341 ccgccgcgat ttgcgtctgg cgctgcgcca ggggtccgat tccatcatgg tggtgacgtt
     2401 ctttgtcttg accgtcgtgc tgttcccgtt cggcatcggc ccggaatcgg gcgtgctgga
     2461 gcggatttcg gccggcgtgc tgatggtgac cgccttgctg gcgtccatgc tgtcgctcga
     2521 ccgcctgttc caggccgatt acgaggacgg ctcgctggaa ttgctggtgc tgaccccgac
     2581 cccgctggaa gtcgtggtcg ccgccaaggt cgcggcccac tggctgacca ccggcctgcc
     2641 gctgctggtg gcggcgccgg tgctggcggt gctgctgcac atgaattcgg aaggcttcgg
     2701 cacgctgatg ctggccatgc tgctggccac gccggtgctg tcgctga
//
LOCUS       DATIKR010000191         1718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_136084, whole genome shotgun sequence.
ACCESSION   DATIKR010000191 DATIKR010000000
VERSION     DATIKR010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136084"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1540
                     /locus_tag="VLL76_02850"
     CDS             <1..1540
                     /locus_tag="VLL76_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HSV28461.1"
                     /translation="IKRFIGGAGGTVVGIGREVMGKRKDGTLIPVHLSVSELRLDKRR
                     LFTGTIRDLTENKQLAQRVNYLANHDPLTDLPNRTLLTDRLGQAVALARAAGNHVAVM
                     TIDLDGFTTINDSLGHDVGNAVLRETARRLSQSLPQGGTAARLAGDEFAVLAPNLKDL
                     AAVSQMVEMVRENLAKPLHVQGHDVTLPADVGVSVYPRDGEEPLDLLRNAEMALHAVK
                     KRPDERLGFFDAAMSYAVTERLTLERSIKHALTIGQFELFYQPQVRLSDYRIVGAEAL
                     IRWRHPELGIIAPDKFIPVAEETGLIVPMGRWILQEACAQVRRWGDLGLPQIRLGVNI
                     SGRQFREPDLADTVKQAIRDAGIEARLLDLELTESMLMVDGEGTLKLLRELSNLGVTL
                     SIDDFGTGYSSLAYLKRFPVNTVKIDRAFVRDLEHDEDGRVIANAIVSLAHSLSLNTI
                     AEGVETEQQATLLAKHGCDEIQGYLIGRPLPASEFIAFAQNYDATARAAGGQGAGTRQ
                     GVGA"
     gene            1537..>1718
                     /locus_tag="VLL76_02855"
     CDS             1537..>1718
                     /locus_tag="VLL76_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28462.1"
                     /translation="MTGTVVIVEDNAMNMKLLEQALTIAGYEVVKSSDGEGLTDMAAA
                     ANAHVILMDIQLPKYSG"
BASE COUNT          304 a          597 c          566 g          251 t
ORIGIN      
        1 catcaagcgg ttcatcggcg gcgccggcgg caccgtggtc ggcatcggcc gcgaggtcat
       61 gggcaagcgc aaggacggca cgctgatccc ggtgcacctg tcggtgtcgg aattgcggct
      121 cgacaagcgg cgcctgttca ccggcaccat ccgcgacctg accgagaaca agcagttggc
      181 gcagcgggtc aactacctgg ccaaccacga cccgctgacc gacctgccca accgcaccct
      241 gctgaccgac cgcctgggcc aggcggtggc cctggcccgc gccgccggca accacgtggc
      301 ggtgatgacc atcgacctcg acggcttcac caccatcaac gattcgctgg gccatgacgt
      361 cggcaacgcg gtgctgcgcg agaccgcgcg gcggctcagc cagtcgctgc cccagggcgg
      421 caccgccgcc cgcctggccg gcgacgaatt cgccgtgctg gcgcccaatc tcaaggacct
      481 ggccgccgtc agccagatgg tcgagatggt gcgcgagaac ctggccaagc cgctgcacgt
      541 ccagggccac gacgtcaccc tgccggcgga cgtcggcgtg tcggtctatc cccgcgacgg
      601 cgaggagccg ctggacctgc tgcgcaacgc cgagatggcg ctgcatgccg tcaagaagcg
      661 ccccgacgag cggctgggct tcttcgacgc cgccatgtcc tatgcggtga ccgagcgcct
      721 gacgctggaa cgctcgatca agcacgcgct gaccatcggc cagttcgagc tgttctacca
      781 gccgcaggtg cgcctgtccg actaccgcat cgtcggcgcc gaggcgctga tccgctggcg
      841 ccatccggaa ctgggcatca tcgcccccga caagttcatc ccggtggccg aggaaaccgg
      901 cttgatcgtt cccatgggcc gctggatcct gcaggaagcc tgcgcccagg tgcggcgctg
      961 gggcgacctg gggctgccgc agatccgtct gggcgtcaac atctcgggcc gccagttccg
     1021 cgaacccgat ttggccgaca ccgtcaagca ggccatccgc gacgccggca tcgaggcccg
     1081 cctgctggat ttggaactga ccgaaagcat gctgatggtc gacggcgagg gcacgctgaa
     1141 actgctgcgc gagctgtcca acctgggggt gacgctgtcc atcgacgatt tcggcaccgg
     1201 ctattcgtcg ctggcctacc tcaagcgctt cccggtcaac acggtcaaga tcgaccgcgc
     1261 cttcgtgcgc gacctcgagc atgacgagga cggccgcgtc atcgccaacg ccatcgtgtc
     1321 gctggcccat tcgctgtcgc tcaacaccat cgccgagggc gtcgagaccg agcaacaggc
     1381 gacgctgctg gccaagcacg gctgcgacga gatccagggc tacctgatcg gccggccgct
     1441 gccggcatcg gaattcatcg cattcgccca gaactacgat gcgaccgcgc gcgccgcggg
     1501 gggacaaggc gcggggacaa ggcagggagt gggggcatga ccggaacggt cgtcatcgtc
     1561 gaagacaacg cgatgaacat gaagttgctg gaacaggcgc tgaccatcgc cgggtacgag
     1621 gtggtgaagt cgtcggacgg agagggtctg accgacatgg cggccgccgc caacgcccac
     1681 gtcatcctga tggacatcca actgcccaaa tattcggg
//
LOCUS       DATIKR010000192         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_63723, whole genome shotgun sequence.
ACCESSION   DATIKR010000192 DATIKR010000000
VERSION     DATIKR010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63723"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1108)
                     /locus_tag="VLL76_02860"
     CDS             complement(<1..1108)
                     /locus_tag="VLL76_02860"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSV28463.1"
                     /translation="MLSEETLTGDRHMSGRLRDATISEQLYALAGVVFVGFALVLGGW
                     LHTRSIQDDAFDRHMAELADLREAVALDFWLLKARYFEKEFLIRPDEKYVGDMDVPRK
                     HLLEALAEMKTAHPDGLMAGVRSYFAHWDAFTAGWRELGMAPDGGLRGRLAERAADLS
                     SRFAAIVAARAEAEDEEVEKAIGEVRRLEVELRLRADRAGLDEAQASVAKLRGLLERS
                     PHLHPAERTGMVAATEAFTAQLAPAGDLMLRLSADATKFKEFYAPAKKGIDAIIAANA
                     AEQEQARKEYEAARRFGTFAMLVTAIPTVILVTTMALISARLLSGRVKVLSARMSAVA
                     DGDLEGHVPFAEGRSEISVMARALAVFRENALSLA"
     gene            1216..>1706
                     /locus_tag="VLL76_02865"
     CDS             1216..>1706
                     /locus_tag="VLL76_02865"
                     /inference="COORDINATES: protein motif:HMM:NF021010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HSV28464.1"
                     /translation="MTRSAYSLGLLGATFAALGAAWIFNGQGVVRNDDARHIHIPETL
                     TVPFQVRAAYNGERIFFQYRWPADRPGIHMEALRFEGGKWAKYGEDKPGPQDHVFLED
                     RVAMMVDDGGVPEFARYGGYIAIGGGLDSFTSAAGQKEVEAHPYLGKANLKQSAVTKY
                     LPQT"
BASE COUNT          306 a          568 c          537 g          295 t
ORIGIN      
        1 gcgccaggga aagtgcgttc tcgcggaata cggccagcgc ccgcgccatg actgagattt
       61 cgcttcgtcc ttcggcgaag ggaacgtgcc cctccaggtc accatcggcc actgcggaca
      121 tccgcgccga caacaccttg acgcgtccgc tcagcagcct ggccgaaatc agggccatgg
      181 tggtgaccag gatcacagtc ggaatggccg tcaccagcat ggcgaacgtc ccaaagcgac
      241 gggccgcttc atattccttg cgcgcctgct cctgctcggc ggcgttcgcg gcgatgatcg
      301 cgtcgatccc cttcttggct ggcgcataga attccttgaa tttcgttgcg tcggccgaca
      361 accgcagcat gaggtcgccg gcgggcgcca gttgagcggt gaacgcctcg gtcgccgcga
      421 ccatgccggt acgttcggcg gggtgcagat gtggcgagcg ttcaagcagg cctcgcagct
      481 tggcgaccga tgcctgcgcc tcgtccagcc cggcgcgatc ggcgcgcagc cgcaattcca
      541 cctccagccg gcgtacctcg ccgatcgcct tctcgacctc ctcgtcttcc gcctcggcgc
      601 gggcggcgac aatggcggcg aagcgggacg acaaatccgc cgcccgctcg gccagccgcc
      661 ccctcaggcc gccatcggga gccatcccca attccctcca gccagcggtg aaggcgtccc
      721 aatgggcgaa gtaggaacgc accccagcca taaggccgtc tggatgcgcc gttttcatct
      781 cggccagcgc ttccagcaga tgcttccggg gaacgtccat gtcgccgacg tatttctcgt
      841 cgggacggat gagaaattcc ttttcgaaat agcgggcctt gagcagccag aaatccagcg
      901 cgaccgcctc gcggagatcg gcgagttcgg ccatgtgccg gtcgaaggcg tcgtcctgga
      961 ttgaccgggt gtgcaaccag ccgcccagca ccagggcgaa gcccacgaag accaccccgg
     1021 cgagggcata aagctgttcg gatatggtcg catcgcgcag gcggccggac atatggcgat
     1081 ctcccgtcag tgtttcctcc gaaagcatcc gcccctttcc tgatgccaac cttacgcaca
     1141 gcggcgcggt cgcgccgcgt caggtcaatg tcaggattgc cgaacatagt cgtgccgcga
     1201 gcaagaggag caagtatgac gcgatcagcc tattccttgg gattgctggg ggccacgttc
     1261 gctgcccttg gcgcggcctg gatctttaac ggccagggtg tggtccgcaa cgacgatgcc
     1321 cggcatatcc acatccccga gacccttacg gtcccgttcc aggtccgcgc cgcctataac
     1381 ggcgagcgca ttttcttcca gtatcgctgg cccgccgacc gcccgggaat ccacatggaa
     1441 gcgctccggt tcgagggcgg caagtgggcg aagtacggcg aggacaagcc gggtccccag
     1501 gatcatgtgt tcctggagga tcgcgtggcc atgatggtcg atgacggcgg cgtcccggag
     1561 ttcgcccgct atggtggata catcgcgatt ggcggcgggc tggacagctt cacgtcggcg
     1621 gcgggacaga aggaagtcga ggcgcacccc tatctgggca aggccaatct caagcaatcg
     1681 gcggtgacca aatacctacc gcagac
//
LOCUS       DATIKR010000193         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_136160, whole genome shotgun sequence.
ACCESSION   DATIKR010000193 DATIKR010000000
VERSION     DATIKR010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136160"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..453)
                     /locus_tag="VLL76_02870"
     CDS             complement(16..453)
                     /locus_tag="VLL76_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28465.1"
                     /translation="MASQTILLVEDNPDDVELTMLAFRRSRMANEILVAWNGEEALDY
                     LLGRGAHSGRDPKDTPALVLLDLKLPGMGGLDVLRRIRENPDTKRVPVVILTTSDDEA
                     DIVTGYNLGVNSYIRKPVDFSSFVGVVDQMGLYWLVVNTPPPV"
     gene            complement(425..2017)
                     /locus_tag="VLL76_02875"
     CDS             complement(425..2017)
                     /locus_tag="VLL76_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020207661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28466.1"
                     /translation="MGNSDDVRGASATDGESYLHPFRPLGRGIGLRLLLLIVLFSSMV
                     TLASTILQLYVDYRRDVDAIEERLSEIERTHLDTIAASLWHVDAEQLQVQLDGLIRLP
                     DMQLVQVRETVANVTQPLVVTAGEPDLHPGIHRSYRVVYDDRGARREIGVLDIDASLE
                     GVYRRLIDTAVLILITQGIKTFLVSLFILYIVHRLVTRHLMAIAGFLDRFHIGTAGKL
                     ALHRVPPAVPDELDCMVTAFNGMRTNLDRAYDELRAVNVALERDIIARRLAEEEVSRL
                     NAVLEQRVRQRTAELEAANAELAAFSYSVSHDLRAPLRRIEGFGQMLVDFYTDAIDDR
                     GRHYLERIRAGTHEMADMIDSFLKLSRATRGELAVEPLDLSALAAEAFDRLREKDPSR
                     QVTVDIQPGITVDGDRKLMAVALTNLVENAWKYTRNTAEAEIRFGTEKAEDGSTVYVL
                     RDNGAGFDMAFADRLFIPFHRLHKPEEFEGTGIGLATVQRIVARHGGRVWAEGVIGQG
                     AVFRFTCWEGRSVDGQPDNPAG"
BASE COUNT          337 a          689 c          703 g          356 t
ORIGIN      
        1 cccctcgtgt ctccgttaca ccggcggcgg cgtgttcacc accagccagt agagtcccat
       61 ctgatcgacc acgcccacga aggagctgaa gtccaccggt ttgcggatgt agctgttgac
      121 ccccaggttg tagccggtga cgatgtcggc ctcgtcgtcc gaggtcgtca ggatgaccac
      181 cggtacccgc ttggtgtccg gattttcgcg gatccggcga aggacgtcca gcccccccat
      241 gccgggcagc ttgaggtcga gcagcaccag ggcgggcgtg tccttgggat cgcggcccga
      301 atgggcgccg cgccccagca aatagtcgag cgcctcctcg ccgttccacg ccaccaggat
      361 ctcgttcgcc atcctgctgc ggcggaacgc gagcatggtc agctcgacat cgtccggatt
      421 gtcctcaacc agcaggattg tctggctggc catcgacgct tctcccttcc caacaggtaa
      481 atctgaatac agccccctgg ccgatgaccc cctcggccca gacccggccg ccgtgacggg
      541 cgacgatgcg ctggacggtg gcgaggccga tgccggtgcc ctcgaattcc tcgggcttgt
      601 gcaggcggtg gaacggaatg aacaggcggt cggcgaacgc catgtcgaaa ccggcgccgt
      661 tgtccctgag cacatagacg gtcgagccgt cctccgcctt ctcggtgccg aagcggatct
      721 cggcctcggc ggtgttgcgg gtgtacttcc acgcattctc gaccaggttg gtcaacgcca
      781 ccgccatcag cttgcggtcg ccgtccaccg tgatgccggg ctggatgtcc accgtcacct
      841 ggcgcgacgg gtccttctcg cgcaggcggt cgaacgcctc ggccgccaag gcggacaggt
      901 ccagcggctc gaccgccagt tcgccccggg tggcgcgcga cagcttgagg aagctgtcga
      961 tcatgtcggc catctcgtgg gtgccggcgc ggatgcgctc gaggtagtgg cggccacggt
     1021 cgtcgatggc gtcggtgtag aaatccacca gcatctggcc gaagccctcg atgcggcgca
     1081 agggcgcccg caggtcgtgc gacaccgaat acgagaacgc agccagctcg gcattggcgg
     1141 cctccagctc ggcggtgcgt tgccgcacgc gctgctccag cacggcgttc aggcgcgaca
     1201 cctcttcctc ggccaggcgg cgggcgatga tgtcgcgttc cagcgccacg ttgaccgccc
     1261 gcagctcgtc ataggcgcga tccaggttgg tgcgcatgcc gttgaaggcg gtgaccatgc
     1321 aatcaagctc gtcggggacg gcgggcggca cccggtgcag cgccagcttg ccggcggtgc
     1381 cgatgtggaa gcggtcgagg aagccggcga tggccatcag gtggcgggtc accaggcggt
     1441 ggacgatgta caggatgaac agcgacacca ggaaggtctt gatgccctgg gtgatcagga
     1501 tcagcacggc ggtgtcgatc agccggcggt agaccccttc cagcgaggcg tcgatatcga
     1561 gcacgccgat ctcgcggcgg gcgccgcgat cgtcgtagac gacgcggtag cttcggtgga
     1621 tgccgggatg caggtcgggc tcgccggcgg tgaccaccag cggctgggtg acgttggcga
     1681 cggtctcgcg cacctgcacc aactgcatgt cgggcaggcg gatcaagccg tcgagctgca
     1741 cctgcaactg ctcggcgtcc acgtgccaca ggctggcggc gatggtgtcg aggtgggtgc
     1801 gctcgatctc gctcagccgt tcctcgatgg cgtcgacgtc gcggcggtaa tcgacataaa
     1861 gctgcaggat ggtggacgcc agcgtcacca tcgaactgaa caggacgatc aacagcagca
     1921 gccgcaggcc gatgccccgg cccaacggcc tgaacggatg caggtaggac tcgccgtccg
     1981 tggcgctcgc gccccgcacg tcgtcgctgt tccccattcc tgacgtcccc ccggatatgc
     2041 tcatctgccc gccttggtgg gcgttacttt aaatcgaaag tctcg
//
LOCUS       DATIKR010000194         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_159956, whole genome shotgun sequence.
ACCESSION   DATIKR010000194 DATIKR010000000
VERSION     DATIKR010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159956"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1300)
                     /locus_tag="VLL76_02880"
     CDS             complement(<1..1300)
                     /locus_tag="VLL76_02880"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030729 - acetoacetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HSV28467.1"
                     /translation="MSDLLWQPSAKRVADANLTAFIRLVNEQRGAGIHDYDGLWQWSV
                     AAPEAFWRTMWEFGGIIGDGPGAVVVDDVTRMPGARWFPEARLNFAENLLRRRDEADA
                     MVFWGEDKVKRRLSFAQLHQLVSRIQQALKAAGVGEGDRVAGYMPNMPETVAFMLATA
                     SLGAIWSSASPDFGVQGVLDRFGQIAPKVLVSADGYFYGGKSHDSVAKLVEIVPAMAS
                     VERVVVVPYTRNADLGAVPKAVHLDDFLAPFSAREVEFVRLPFAHPLYIMFSSGTTGA
                     PKCIVHSAGGTLIQHLKEHRLHSDVKPDDRVFYFTTCGWMMWNWLVSALACEATLLLY
                     DGNPSALDGRILFDFAEAEGMTFFGTSAKWIDAIAKMGLEPAKIHDLSSVRTIASTGS
                     VLAPEGFDYIYRSVKKDVQLASISGGTDIVSCFMLGNPIGP"
     gene            complement(1362..>1680)
                     /locus_tag="VLL76_02885"
     CDS             complement(1362..>1680)
                     /locus_tag="VLL76_02885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HSV28468.1"
                     /translation="MAMPHVDSDSFWKKVRATAGIIPFADEVVAMWYAAWDPRTPTKV
                     KAIVLGALAYFILPFDIVPDFIVGLGYGDDLAILWGAIRAVRPHVTDEHRARARAALK
                     SET"
BASE COUNT          308 a          552 c          571 g          249 t
ORIGIN      
        1 ccgggccgat gggattgccc agcatgaagc acgacacgat gtcggtgccg cccgagatgg
       61 acgccaattg gacgtccttc ttgaccgagc gatagatgta gtcgaagccc tcgggcgcca
      121 gcaccgagcc ggtcgaggcg atggtgcgga cactggacag atcgtggatc ttggccggct
      181 ccaatcccat cttggcgatg gcgtcgatcc acttggccga ggtgccgaag aaggtcatgc
      241 cctcggcctc ggcgaagtcg aacaagatgc ggccgtccag cgccgacggg ttgccgtcgt
      301 acagcagcag ggtggcctcg cacgccaggg cgctgaccag ccagttccac atcatccagc
      361 cgcaggtggt gaaatagaac acgcggtcat ccggcttcac gtcggagtgc agccggtgct
      421 ccttgaggtg ctggatcagc gtgccgccgg cggaatggac gatgcatttc ggcgcaccgg
      481 tggtgcccga cgagaacatg atgtagagcg ggtgggcgaa gggcaggcgc acgaactcga
      541 cctcgcgcgc cgaaaaaggc gccaagaagt cgtcgagatg gaccgccttg ggcaccgccc
      601 ccaggtcggc attgcgggtg tagggcacca ccacgacgcg ctcgaccgag gccatggcgg
      661 gcacgatctc aaccagcttg gcgacggaat catggctctt gccgccatag aaatagccgt
      721 ccgccgacac cagcaccttg ggagcaatct ggccgaagcg gtcgagcacg ccctggacgc
      781 cgaaatcggg cgaggccgac gaccagatgg ctcccagcga cgccgtcgcc agcatgaagg
      841 ccaccgtctc gggcatgttg ggcatgtagc cggcgacgcg gtcgccctcg cccaccccgg
      901 cggccttgag ggcctgctgg atgcgcgaca ccaattggtg caactgggcg aaggacagcc
      961 gccgcttcac cttgtcctcg ccccaaaaca ccatggcgtc ggcctcgtcg cgacggcgca
     1021 gcaggttctc ggcgaagttc aggcgagcct cggggaacca gcgggcgccc ggcatgcggg
     1081 tgacgtcgtc caccaccacc gcgccggggc cgtcgccgat gatgccgccg aactcccaca
     1141 tggtgcgcca gaacgcctcg ggcgccgcca ccgaccactg ccacaggccg tcgtaatcat
     1201 ggatgccggc gccgcgctgc tcgttgacca gccggatgaa ggcggtcagg ttggcatcgg
     1261 cgacgcgctt ggcgctgggc tgccacaaaa ggtcggacat gacgtgctgc tcccccgggt
     1321 cgttttcgtc agtctattgc agaaaccatg gggggcaagg gtcaggtttc ggacttcagc
     1381 gccgcgcggg cgcgggcgcg gtgctcgtcg gtcacgtgcg gccggacggc gcggatggcg
     1441 ccccacagga tcgccaggtc gtcgccatag cccaggccga cgatgaagtc gggcacgatg
     1501 tcgaacggca ggatgaaata ggccaacgcc cccagcacga tggccttgac cttggtcggg
     1561 gtgcgcgggt cccaggcggc gtaccacatg gccaccacct cgtcggcgaa cggaatgatc
     1621 ccggccgtcg cgcgcacctt cttccagaac gaatcggagt ccacatgagg catcgccatg
//
LOCUS       DATIKR010000195         3527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_123861, whole genome shotgun sequence.
ACCESSION   DATIKR010000195 DATIKR010000000
VERSION     DATIKR010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123861"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1438)
                     /locus_tag="VLL76_02890"
     CDS             complement(<1..1438)
                     /locus_tag="VLL76_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSV28469.1"
                     /translation="MKGAQTMRIQELSAQAALDSVNSGWDGLDESEVARRLAEYGPNV
                     VERVQATPVWSRFLRNFTHLFAIVLWVAAAMAAMAEWRQPGEGMAILGLAIVLVILVN
                     GLFSFWQEHRSERALESLRRLLPDMVTVRRHGRLSQVTADRLVPGDLLALAEGDSVPA
                     DCRVVRSVGVQLNLSAITGESVATPRDELPDRNSDITQARCLLPAGTTIVSGRAEAAV
                     FATGMRTVLGDIAHITQTAGVELSPLQREVVHLSRIVAVLAFGLGVAFFAIGMAKGME
                     LWRASIFAIGLMVANVPEGLLPTVTLALAMAGQRLARKNVLVRKLAAVETLGSATVIC
                     TDKTGTLTTNGMVARTAFIGGKDWPAERVSDAGAPGRMLLQAGALCHSVEAVDGRLVG
                     DPTEIALIDMAGGVGAARPLDGIPFDADRRRMALLFRADSGQAVLEVKGALDSLLPLC
                     TSIADGDTVRPLAENDRRAVIKAEARLAH"
     gene            complement(1469..2287)
                     /locus_tag="VLL76_02895"
     CDS             complement(1469..2287)
                     /locus_tag="VLL76_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RMD1 family protein"
                     /protein_id="HSV28470.1"
                     /translation="MTAPTEASTPDLTGRRSLLVRAFLLGERLDTKRFEQKQALATTP
                     LTIRCGRKGYAVLFRYGVVALFDVTAEEEAHFQADLVHLVTDPLPEPGREEAHIDVIP
                     GSTEHIDPDGTIILGEIGPERMQVVADVLAKDLVLEHYEIRIAAVFDRVEPLAAKLKA
                     LGRRDFQSRELLSQIGDVLLTKHRMVGRAEVLEKPEVLWNMPELEGLFGRLEREFEIR
                     ERSRALDRKLEVVGDTAETLLDLVHTQRSLRVEWYIVLLIVFEIILSLYEKFFS"
     gene            complement(2291..2692)
                     /locus_tag="VLL76_02900"
     CDS             complement(2291..2692)
                     /locus_tag="VLL76_02900"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019362045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSV28471.1"
                     /translation="MFDLHERLAADCVTVTDWPLCRVLLMNDSTYPWLVLVPRRNAVS
                     ELHELDEADRATLVEELAEASRRLQNATKAFKMNVAALGNVVPQLHVHVIARFQGDAA
                     WPKPVWGVVPGKPYGDAELQAKLAELRSVLA"
     gene            2742..>3527
                     /locus_tag="VLL76_02905"
     CDS             2742..>3527
                     /locus_tag="VLL76_02905"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSV28472.1"
                     /translation="MTERNRWLALLVLPPLFWAGNALVGRAVVGDIPPVGLSFWRWVL
                     ALVVILPFTARSILNHADVLKANWRVVVALGVFSVTAYNTLLYLALQTTTAINATLVG
                     TSLPLMVLVLARLWLDEPIRARQAAGIGVSGLGLVAVVAKGDPTVLARLEFTPGDLLM
                     LVATLSWSIYSVMLRRHPLPVPGLTLLAVLIAVGLVGIAPLYAWELALGLVFVPSAEA
                     LGAIAYTAVFASLLAYYFWNRGVAAVGAAVAGQFTYLIPLFASV"
BASE COUNT          522 a         1203 c         1200 g          602 t
ORIGIN      
        1 catgggcaag cctggcttcc gccttgatga ccgcgcggcg gtcgttttcc gcgagcggcc
       61 tcaccgtgtc gccgtcggcg attgatgtgc ataacggcag gagggaatcc agcgcgccct
      121 tgacctcgag caccgcctga cccgagtcgg cgcggaacag cagcgccatg cgccgccggt
      181 cggcgtcgaa cgggatgcca tccagcggtc gggcggcgcc aacgccacca gccatgtcga
      241 tcagcgcgat ctcggtgggg tcgccgacca gccggccatc caccgcttcg acgctgtggc
      301 acagggctcc cgcttgcaga agcatgcggc cgggcgcgcc ggcatccgag acccgttcgg
      361 ccggccagtc cttgccgccg atgaaagcgg tccgcgccac catgccgttc gtcgtcaagg
      421 taccggtctt gtccgtgcag atgacggtgg ccgagcccaa tgtctcgacc gcggccagct
      481 tgcgcaccag tacgttcttg cgtgcaagcc gctggccggc catggcaagg gcaagggtga
      541 cggtcggcag caggccctcg ggcacgttgg ccaccatcag gccgatggcg aagatcgagg
      601 cgcgccacag ctccatgccc ttcgccatcc cgatggcgaa gaacgccact cccaggccga
      661 aggccagcac ggcgacgatg cgcgacaggt ggaccacctc gcgctgcagc ggcgacagct
      721 cgacgccggc ggtctgggtg atgtgggcga tgtctcccag aaccgtgcgc atgccggtgg
      781 cgaacaccgc cgcctcggcc cggccgctga cgatggtcgt gcccgccggc agcaggcaac
      841 gagcctgggt gatgtcggaa ttcctgtccg gcaactcgtc gcgcggggtc gcgaccgatt
      901 cgccggtgat cgccgacagg ttcagttgca cccccactga tcgcacgacc cggcaatccg
      961 ccggcaccga gtcaccctcc gccaaggcca gaaggtcgcc ggggaccagc cggtcggccg
     1021 tcacctggct caggcggcca tggcggcgca ccgtgaccat gtcgggcagc aggcggcgca
     1081 acgattccag tgctctttcc gagcggtgct cttgccagaa cgagaacagg ccgttgacca
     1141 ggatcaccag gacgatggct aagccgagga tggccatgcc ttcgccgggc tggcgccatt
     1201 ccgccattgc ggccatggcg gccgcgaccc acagcacgat ggcgaacagg tgggtgaaat
     1261 tgcgcaggaa ccgcgaccag acgggcgtcg cctgaacccg ctcgaccacg ttggggccat
     1321 actcggccag ccgccgggcg acctcggact cgtccagccc gtcccagccg ctgttgacac
     1381 tgtccagggc cgcctgggcg ctcagttcct ggatgcgcat ggtctgcgct cccttcacgt
     1441 cacaccgtca gtatgagcgc ggatgccgct aggaaaagaa cttttcgtac agactgagga
     1501 tgatctcgaa aacgatcagc agcacgatgt accattcgac ccgcagcgag cgctgggtgt
     1561 ggaccaggtc gagcagggtc tcggcggtgt cgcccaccac ttccagcttg cggtcgagcg
     1621 cgcgcgagcg ttcgcggatc tcgaattccc gctccaggcg gccgaacagg ccctccaact
     1681 cgggcatgtt ccacagcacc tcgggctttt ccagcacttc ggcgcggccg accatgcggt
     1741 gcttggtcag caggacgtcg ccgatctggc tcaacaattc gcggctctgg aaatcgcgcc
     1801 ggcccagggc cttcagcttg gcggccagcg gctcgacgcg gtcgaacacg gcggcgatgc
     1861 ggatctcgta atgctccagc accaggtcct tggccagcac gtcggcgacc acctgcatgc
     1921 gctcgggccc gatctcgccc aggatgatgg tgccgtcggg gtctatgtgt tcggtcgagc
     1981 cggggatgac gtcgatatgg gcttcctcgc ggcccggctc gggcagcggg tcggtgacca
     2041 gatggaccag gtctgcctgg aaatgtgctt cctcttccgc cgtcacgtcg aacagcgcga
     2101 ccacgccata gcggaacagc acggcatagc ccttgcggcc gcagcggatg gtcaggggag
     2161 tggtcgccag cgcctgcttc tgctcgaacc gcttggtgtc gagccgttcc cccagcagga
     2221 aggcgcggac cagcagcgag cggcggccgg tcaggtcggg ggtgctggct tcggtgggcg
     2281 ccgtcatggt ctacgccagg acgcttcgca actccgccag cttggcctgc aattcggcat
     2341 cgccataggg cttgccgggg accacgcccc agaccggctt gggccaggcg gcgtcgccct
     2401 ggaagcgggc gatgacgtgg acgtgcagtt gcggcaccac gttgcccagg gcggcgacgt
     2461 tcatcttgaa ggccttggtg gcgttctgca gccggcgcga tgcctcggcc aactcctcca
     2521 ccagggtggc gcggtcggcc tcgtccagct catgcagttc cgagacggca ttgcggcgcg
     2581 gcaccagcac cagccaggga taggtggaat cgttcatcag cagcacccgg cacagcggcc
     2641 agtcggtcac cgtcacgcaa tcggcggcca gcctttcatg cagatcgaac atgattccct
     2701 cctcgttgcc tcgggcctcg cttcgcggta tgaccgatcc catgaccgaa cgcaaccgct
     2761 ggctcgccct cttggtgctg ccacccctgt tctgggccgg caacgcgctg gtcggccgcg
     2821 ccgtggtggg cgacatcccg cccgtgggcc tcagcttctg gcgctgggtg ctggccttgg
     2881 tcgtcatcct gccgttcacc gcccgctcga tcctgaacca tgccgacgtg ctgaaggcca
     2941 attggcgggt cgtggtcgcc ttgggcgtct tcagcgtcac cgcctacaac accctgctgt
     3001 atctggcgtt gcagacgacg accgccatca acgccaccct ggtgggcacg tcgctgccgc
     3061 tgatggtgct ggttttggcc cggctgtggc tggacgaacc catccgcgcc cgccaggcgg
     3121 ccggcatcgg cgtgtcgggg ctggggctgg tggcggtggt cgccaagggc gatcccacgg
     3181 tgttggcccg gctggaattc accccgggcg acctgctgat gctggtggcg acgctgtcgt
     3241 ggtcgatcta ttcggtgatg ctgcgccgcc atccgctgcc ggtgccgggg ctgaccctgc
     3301 tggcggtgct gatcgcggtc gggctggtgg gcatcgcgcc gctctatgcc tgggagctgg
     3361 ctttggggct ggtgttcgtg ccgtcggccg aggcgctggg ggccatcgcc tacaccgccg
     3421 tgttcgcctc gctgctggcc tattacttct ggaaccgggg cgtggcggcg gtgggggcgg
     3481 cggtggcggg gcagttcacc tacctcattc cgttgttcgc ctcggtg
//
LOCUS       DATIKR010000196         2470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_232757, whole genome shotgun sequence.
ACCESSION   DATIKR010000196 DATIKR010000000
VERSION     DATIKR010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232757"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1128)
                     /locus_tag="VLL76_02910"
     CDS             complement(<1..1128)
                     /locus_tag="VLL76_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional enoyl-CoA hydratase/phosphate
                     acetyltransferase"
                     /protein_id="HSV28473.1"
                     /translation="MLENRTFDEIKLGDSATLTRTCRMEDVELFGVATGDLNPTHYSD
                     EYAQQLAHHRKVLAHSLWGGSLLSALLGNELPGPGTVYKGQDFDFARPVEVGDTLTLT
                     IVATEKAAPNVVTFDCRAVNQDGAEVFSGKARVFAPTVKVVQPKHELQEISLRRRHHC
                     FEDIIERCAALDPVKVAVCHPCDQVSLEGAVEAAHRGLIEPILVGPEAKIRQVAEEFG
                     LDIAGMRIVDTSHSHESAEKAVALCRSGEAEALMKGSLHTDEMMHEVASRERGLRTGR
                     RISHVFVMDVPTYPKTLLITDAAINIYPSLEDKVDIVQNAIELAHCLDVPQPKVAILS
                     AVETVYPKINSTIEAAALCKMADRGQITGALLDGPLAFDNAI"
     gene            1345..2334
                     /locus_tag="VLL76_02915"
     CDS             1345..2334
                     /locus_tag="VLL76_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLAC1 anion channel family protein"
                     /protein_id="HSV28474.1"
                     /translation="MTQQTPVAAQPAAHAAGLAHVPITVFASVMGVAGLGLAWRKAAP
                     LLGLPAAIGEAMLVLAGILFVAALVTYALKLVRHPAACKGEFNHPIRSSFFAAFSIGL
                     LLLATGAHPHAPKAAEAMWVIGALAQFGITVRVFARWIVHKQELAHANPAWFIPIVGN
                     IIVPILGVRLGQADVSWFFFSVGMALWLPMLAIILNRVIFHDDLPPRLVPTLFILVPP
                     PAIGYLAYTTLVGGADAFANVLVNLALFITMVLLVMGPRFARLPFAVSWWAFTFPLDA
                     AALAALEHGHRNPGNWLFAIAAPVLLGLATMVVALVLARTAAGTVKGTLFVPE"
BASE COUNT          358 a          834 c          807 g          471 t
ORIGIN      
        1 gatggcgttg tcgaaggcca gcgggccgtc cagcagggcg ccggtgatct ggccgcgatc
       61 ggccatcttg cacagggcgg ccgcctcgat ggtcgagttg atcttgggat agaccgtctc
      121 gaccgccgac aggatcgcca ccttgggctg cggcacgtcc aggcaatggg ccagttcgat
      181 ggcgttctgg acgatgtcca ccttgtcttc cagcgaggga tagatgttga tggcggcgtc
      241 ggtgatcagc agcgtcttgg gataggtcgg cacgtccatc acgaagacgt ggctgatgcg
      301 gcggccggtg cgcaggccgc gctcgcggct ggcgacctca tgcatcatct cgtcggtgtg
      361 caggctgccc ttcatcaacg cctcggcctc gcccgagcgg cacagcgcca ccgccttctc
      421 ggccgattcg tgcgagtggc tggtgtcgac gatgcgcatg ccggcgatgt cgaggccgaa
      481 ttcctcggcc acctggcgga tcttggcctc ggggccgacc aggatcggct cgatcaggcc
      541 gcgatgggcg gcctcgacgg ctccttccag cgacacctgg tcgcaaggat ggcacaccgc
      601 caccttgacc gggtccagcg cggcgcagcg ctcgatgatg tcctcgaagc aatggtgacg
      661 gcggcgcagg ctgatttcct gcagctcgtg cttgggctgc accaccttga cggtgggggc
      721 gaacacccgg gccttgccgg agaacacctc ggcgccgtcc tggttgacgg cgcggcagtc
      781 gaaggtgacc acgttgggcg ccgccttctc ggtggcgacg atggtcaggg tcagggtgtc
      841 gcccacctcg accgggcgcg cgaagtcgaa atcctggccc ttgtagacgg tgccggggcc
      901 gggcaattcg ttgcccagca gcgccgacag cagcgagccg ccccacagcg aatgggccag
      961 caccttgcga tggtgcgcca gttgctgggc gtattcgtcg ctgtaatggg tggggttgag
     1021 gtcaccggtg gcgacgccga acaattcgac gtcctccatg cggcaggtcc gcgtgagcgt
     1081 ggccgaatcg cccagcttga tctcgtcaaa cgtccgattt tccagcattt cgaccatggt
     1141 gaccctccgt tgcccgcacc aatgttgcgg tgcggcatga taacccctat cccttaggtg
     1201 ttacaacgtg ccgtgcaaat ccttcacgaa ttggtaaagc cctacctcga agggcggacg
     1261 catgggtgga atgcagggga tgcgattctc agggccgctt tccggtataa gaaggtccta
     1321 atatttttac gaggttcgcc ccccatgact cagcagacgc ccgtcgccgc ccaacccgcc
     1381 gcccacgccg ccggcctggc gcatgttccc atcaccgtgt tcgcctcggt catgggcgtg
     1441 gccggcctgg gtctggcatg gcgcaaggcg gctccgctcc tgggcctgcc ggcggccatc
     1501 ggcgaggcga tgctggtgct ggccggcatc ctgttcgtcg ccgccctggt cacctatgcg
     1561 ctgaagctcg ttcgccatcc ggcggcgtgc aagggcgagt tcaaccaccc gatccgctcc
     1621 agcttcttcg ccgccttctc catcggcctg ctgctgctgg cgaccggcgc gcacccgcac
     1681 gctcccaagg ccgccgaggc catgtgggtg atcggcgcgc tcgcgcagtt cggcatcacc
     1741 gtgcgggtgt tcgcgcgctg gatcgtgcac aagcaggaac tggcccacgc caacccggcc
     1801 tggttcatcc ccatcgtcgg caacatcatc gtccccatcc tgggcgtgcg cctgggccag
     1861 gccgacgtgt cgtggttctt cttctcggtc ggcatggcgc tgtggctgcc catgctggcg
     1921 atcatcctca atcgcgtcat cttccacgac gacctgccgc cgcgcctggt gccgacgctg
     1981 ttcatcctgg tgccgccgcc ggccatcggc tatctggcct acaccacgct ggtcggcggc
     2041 gccgacgcct tcgccaacgt gctggtcaac ctggctctgt tcatcaccat ggtgctgctg
     2101 gtgatgggcc cgcgcttcgc ccgcctgccc ttcgcggtgt cgtggtgggc cttcaccttc
     2161 ccgctcgacg ccgccgccct ggccgcgctg gagcacggcc accgcaatcc cggcaactgg
     2221 ctgttcgcca tcgccgcccc ggtgctgctg ggcctggcga ccatggtggt ggcgctggtg
     2281 ctggcgcgca cggcggcagg aaccgtcaag ggcaccctgt tcgtgcccga atgacggaaa
     2341 tccgatagtg gaattgccgg cccaacatgg ccggcatgac cacgagcatg ttgcagcgca
     2401 caatggcgaa ggttattttc ctggctatca ccacggtata gcctggggcc gtcatgagcg
     2461 tccgtaatct
//
LOCUS       DATIKR010000197         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_232816, whole genome shotgun sequence.
ACCESSION   DATIKR010000197 DATIKR010000000
VERSION     DATIKR010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232816"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..659)
                     /gene="mreD"
                     /locus_tag="VLL76_02920"
     CDS             complement(144..659)
                     /gene="mreD"
                     /locus_tag="VLL76_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HSV28475.1"
                     /translation="MKPSVWVRMDTWVRHLVPIGVTLAMVLLTAVPTRLPGFSTVAPM
                     LPLMGVYYWAIYRPDLLPAWAAFLVGLLYDVIAGTPLGVNALVLLLVQGTSASQRKFF
                     LGKSFMVAWWAFGLLAAGAIGLAWLLVSILRGVAIDPSPLMIEYLMMMGLFPVMTWML
                     ARTQMAFLKDV"
     gene            complement(656..1540)
                     /gene="mreC"
                     /locus_tag="VLL76_02925"
     CDS             complement(656..1540)
                     /gene="mreC"
                     /locus_tag="VLL76_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HSV28476.1"
                     /translation="MKQSGAVGRLAHLRLLAQRFAFISLIVAAFALMILGKADVVLIE
                     RTRTLVADGLAPILDMMSRPAATIAQVVDNVRELSNLRAENARLKADNQRLLHWQMVA
                     RQLESENAVLHEHLNVVADPDPAFITARVIGDLGSAFGHSMLLNAGAKDGVRKGQAVL
                     AGETLVGYIAEVGQRSSRLLLLTDINAHIPVTVESTRTRGILTGDNDKRPKLNYIAGN
                     PTISVGDRVVTSASGAAFPPGLPIGVVASNVDGNIRIEPFIQRHELEFVSIIDYGLGG
                     ILPFERPPEPARRRGGEN"
     gene            complement(1631..>1746)
                     /locus_tag="VLL76_02930"
     CDS             complement(1631..>1746)
                     /locus_tag="VLL76_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558701.1"
                     /note="functions in MreBCD complex in some organisms;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HSV28477.1"
                     /translation="TGLPVSIADDPLSCVALGTGRALEEMPKLKNVLTSMY"
BASE COUNT          321 a          569 c          596 g          260 t
ORIGIN      
        1 gccagcatcc tgtacttttc ggcctcgatg acctgcagat agtacatgcg cgccgccaag
       61 gcgccgacca gcgtcgcctg gccgccggcc agcatcatgg cccggcggct gaagaccttg
      121 gcgcggtcgt tgtcgtggta catctaaacg tccttcagga acgccatctg agtgcgcgcc
      181 agcatccagg tcatgacggg gaacaggccc atcatcatca ggtattcgat catcagcggc
      241 gacgggtcga tggcgacgcc acgcaggatc gacaccagaa gccaggccag cccgatggcg
      301 cccgcggcaa gcaggccgaa cgcccaccac gccaccatga aggacttgcc caggaagaac
      361 ttgcgctggg acgccgacgt accttgcacc agaagcaata ccagcgcgtt aacgcccagc
      421 ggggttccgg cgatgacgtc gtacagcaaa ccgaccagga acgcggccca ggcgggcagc
      481 agatcggggc gatagatggc ccagtaatag acccccatca gcggcagcat gggcgccacc
      541 gtggaaaagc cgggcaggcg ggtcggcacg gcggtcagca ggaccatggc aagcgtcacg
      601 ccgatgggaa ccaggtgcct gacccaggtg tccatgcgca cccagacgga gggcttcaat
      661 tctctccccc acggcggcgc gcgggctcgg gcgggcgttc gaacggcagg atgccgccca
      721 ggccgtaatc gatgatggac acgaattcca gctcgtggcg ctggatgaac ggttcgatgc
      781 ggatgttgcc gtccacgttc gaggccacca cgccgatggg caggccgggc gggaaggcgg
      841 cgcccgaggc cgacgtcacc acgcggtcgc cgaccgagat ggtggggttg ccggcgatgt
      901 agttgagctt gggccgcttg tcgttgtcgc cggtcaggat gccgcgggtg cgggtcgatt
      961 ccaccgtcac cgggatgtgg gcgttgatgt cggtcagcag cagcagccgc gacgaccgct
     1021 ggcccacctc ggcgatgtag ccgaccaggg tctcgcccgc cagcaccgcc tggcccttgc
     1081 gcacgccgtc cttggcgccg gcgttcaaca gcatggaatg gccgaaggcc gaacccaggt
     1141 cgccgatgac gcgggcggtg atgaaggcgg ggtcgggatc ggcgacgacg ttgaggtgct
     1201 cgtgcagcac cgcgttctcg ctctccaact gccgcgccac catctgccag tgcagcaggc
     1261 gctggttatc ggccttcagg cgggcgttct cggcgcgcag gttcgacagc tcgcggacat
     1321 tgtcgaccac ctgcgcgatg gtcgccgccg ggcgcgacat catgtcgagg atgggggcca
     1381 ggccgtcggc caccagggtg cgggtacgtt cgatcaggac gacgtcggcc ttgcccagga
     1441 tcatcagagc gaatgcggcg acgatcaggg agatgaaggc gaaacgctgc gccagcaggc
     1501 gcagatgcgc tagacgtccg accgcaccgg actgcttcac gaggacccct ccgttcttac
     1561 ggcacggccg ccagtgatgg actggcggcc ggccctcgca aacctactac atctagtgcg
     1621 ccaaaaacta ctagtacatg ctcgtgagca cgttcttgag cttcggcatc tcttccagcg
     1681 cgcggccggt gcccaaggcc acgcaggaca gcgggtcgtc ggcgatcgac accggcaggc
     1741 cggtgg
//
LOCUS       DATIKR010000198         4090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_221036, whole genome shotgun sequence.
ACCESSION   DATIKR010000198 DATIKR010000000
VERSION     DATIKR010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221036"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /locus_tag="VLL76_02935"
     CDS             complement(<1..825)
                     /locus_tag="VLL76_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014448267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV28478.1"
                     /translation="MTETDLRAKQPRFRGLEAGHRACQGCGEALAARLVTEAAGPDVI
                     LTNATGCLEVFSTAWPQSAWRVPWLHSLFENSAAIASGVEAALKAQGRRTKVIAQGGD
                     GGTFDIGFQALSGMLERMHNVLYVCYDNEAYMNTGIQRSSSTPHAAMTTTSPPGKERM
                     GKRHMKKDLLSIIAAHHIPYAASASVAYPQDLRRKVRRAMEIEGPTFLLVHSPCPLGW
                     GHDGTVTIEVGRLAVQTGLFPLVELERGEVASVMPIRTPVPVAEYLKRQGRFRHLFA"
     gene            complement(839..2005)
                     /gene="porA"
                     /locus_tag="VLL76_02940"
     CDS             complement(839..2005)
                     /gene="porA"
                     /locus_tag="VLL76_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014448268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate ferredoxin oxidoreductase"
                     /protein_id="HSV28479.1"
                     /translation="MLEALEGSQAIARAVALCRPGVVAAYPITPQTHIVENISKLVAD
                     GKLDTELVSVESEFSAASVALGASAAGSRAYTASSSQGILLMAEVLFNIAGLRLPVVL
                     TCANRAVGAPINIWNDHQDSMAVRDAGWIQIHCADNQEAIDTSIQAFRIAEAAELPVM
                     VCMDGFVLTHTLETLEIPDQKVVDKYLPPFQFSRTLDPRNPLSIGTLVGPEYFTEIRH
                     AQHKALNDTLETIVEADRLWEKATGRACGGLLTVEGPADAKIGVLAMGSVVSTFQEAM
                     ETGLSKKKAKLIKLRTFRPFPAAALMAACDGLTDLVVVDRSLSPGSGGILGGEVKAVL
                     ADLKKPPRIHNVAVGLGGRDVPMEMWPRLLDVAKEAPGFRILDLEPAKLDPADL"
     gene            complement(1998..2564)
                     /locus_tag="VLL76_02945"
     CDS             complement(1998..2564)
                     /locus_tag="VLL76_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015258799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSV28480.1"
                     /translation="MIEVRIHGRGGQGNVVAAYLLATAAFETGRHCQAFPSFGAERRG
                     APVTAFVRIADKPIKRRCQVAAPAFLVVQDSGLLHIPATLDGLRAGGGIVVNSQRSSE
                     DLAAECGRPVVALPASQMAADILGRPVPNVALLSAFLAVTGLMPADALVKALAHRFKG
                     DVLERNTKLIEAATKTVPAGLWREVAHA"
     gene            complement(2655..2942)
                     /locus_tag="VLL76_02950"
     CDS             complement(2655..2942)
                     /locus_tag="VLL76_02950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28481.1"
                     /translation="MDPVSATPAHVLMQQRADREDSHSIKSGEQGAASVFASYAFGPM
                     TLSDGKGGAAKRESKPEGAPTTGNPLSANSMSWVTSVQGLDAGASTGGKKL"
     gene            3147..3542
                     /locus_tag="VLL76_02955"
     CDS             3147..3542
                     /locus_tag="VLL76_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HSV28482.1"
                     /translation="MAKKYFVVGGEYADTSFTQIAPGAKEERFGPFDEHEAHVCWRAL
                     TGKTVDNAMVRYSIRSDEAAEQEWFVIGGEYADTGFEVIAPGKSLETHGPFSRKDAMD
                     KWRALTGQTVDNAMVRYDLCTADELKLRR"
     gene            3611..3925
                     /locus_tag="VLL76_02960"
     CDS             3611..3925
                     /locus_tag="VLL76_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HSV28483.1"
                     /translation="MSHKYHAFVCGQSRPAGHPRGCCTSKGAQPLMEHLMGKFMQNQL
                     WEKGVSVAQASCLGTCNMGPVMVVYPEGVWYQPKTTADIDEIVDSHFGNGKVVERLQF
                     NP"
BASE COUNT          662 a         1308 c         1437 g          683 t
ORIGIN      
        1 ggcgaacagg tggcggaagc ggccctggcg cttgaggtac tcggccaccg gcaccggggt
       61 gcggatgggc atgacgctgg cgacctcgcc ccgttccagc tcgaccagcg ggaacaggcc
      121 ggtctgcacc gccaggcggc cgacctcgat ggtgacggtg ccgtcatggc cccagcccag
      181 cgggcagggg gaatggacca gcaggaaggt cggcccctcg atttccatgg cgcgccggac
      241 cttgcgccgc aaatcctgcg gataggccac cgaggccgat gcggcgtagg ggatgtggtg
      301 ggcggcgatg atggacagca ggtccttctt catgtgccgc ttgcccatgc gctccttgcc
      361 gggcggcgag gtggtggtca tggccgcgtg cggcgtcgag ctggagcgct ggatgccggt
      421 gttcatgtag gcttcgttgt cgtagcagac ataaagcacg ttgtgcatgc gctccagcat
      481 gcccgacagc gcctggaagc cgatgtcgaa ggtgccgccg tcgccgccct gggcgatcac
      541 cttggtgcgg cggccttggg ccttcagcgc cgcctcgacg ccgctggcga tggcggcgga
      601 attctcgaac agcgaatgca gccacggcac tcgccatgcc gattgcggcc aggcggtgga
      661 gaacacctca aggcaaccgg tggcgttggt caggatgacg tcggggccgg cggcctcggt
      721 caccagccgg gcggccagcg cctcgccgca gccctggcag gcgcggtggc cggcttccaa
      781 cccacggaag cgcggctgct tggcgcggag atcggtctcg gtcatggcgc gcgctccctt
      841 acaggtcggc cgggtcgagc ttggccggct cgaggtcgag gatgcggaag ccgggggctt
      901 ccttggcgac gtccagcagg cggggccaca tttccatggg cacgtcgcgg ccgcccaggc
      961 cgacggcgac gttgtggatg cgcggcggct tcttgaggtc ggccagcacc gccttgacct
     1021 cgccgcccag gatgccgccc gaaccgggcg acagcgagcg gtccaccacc accaggtcgg
     1081 tcagcccgtc gcaggccgcc atcagggcgg cggcggggaa ggggcggaag gtgcgcagct
     1141 tgatcagctt ggccttcttc ttcgacaggc cggtctccat cgcttcctgg aaggtggaca
     1201 ccaccgagcc catggccagc acgccgatct tggcatcggc cggaccttcc accgtcagca
     1261 ggccgccgca ggcgcgcccg gtcgcctttt cccacagccg gtcggcctcg acgatggtct
     1321 ccagcgtgtc gttgagcgcc ttgtgctggg cgtggcggat ctcggtgaag tattccggcc
     1381 cgaccagcgt gccgatggac agcgggttgc gcgggtcgag cgtgcggctg aactggaacg
     1441 gcggcaggta cttgtccacc accttctgat cggggatttc cagggtttcc agcgtgtggg
     1501 tcaggacgaa gccgtccatg cacaccatta ccggcaattc ggcggcctcg gcgatgcgga
     1561 aggcctgaat cgaggtgtcg atggcttcct ggttgtcggc gcaatggatc tggatccagc
     1621 cggcgtcgcg cacggccatg gaatcctggt ggtcgttcca gatgttgatg ggggcgccga
     1681 cggcgcggtt ggcgcaggtc agcaccaccg gcagcctcag gccggcgatg ttgaacagca
     1741 cctcggccat cagcaggatg ccctgcgacg acgacgcggt gtaggcgcgc gacccggccg
     1801 ccgaggcgcc cagcgccacc gacgcggccg agaactcgct ttcgacgctg accagttcgg
     1861 tgtccagctt gccgtcggcc accagcttcg agatgttctc gacgatgtgg gtctgcggcg
     1921 tgatgggata ggcggcgacc acgccggggc ggcacagcgc cacggcgcgg gcgatggcct
     1981 ggctgccttc cagggcttca agcatgggcg acctcccgcc acaggccggc cggcaccgtc
     2041 ttggtggcgg cctcgatcag cttggtgttg cgctcgagca cgtcgccctt gaagcggtgc
     2101 gccagcgcct tgaccagggc gtcggccggc atcagcccgg tgacggccag gaaggcggac
     2161 agcagcgcca cgttgggcac cggccgcccc aggatgtcgg ccgccatctg gctggccggc
     2221 agggcgacga ccgggcggcc gcattcggcc gccaggtctt ccgagcttcg ctgcgaattg
     2281 accacgatgc cgccgccggc cctgaggccg tccagcgtgg cggggatgtg cagcagaccg
     2341 gaatcctgga ccaccaggaa ggccggcgcc gccacctggc agcgccgctt gatcggcttg
     2401 tcggcgatac ggacgaacgc ggtgacggga gcaccgcgcc tttcggcgcc gaaactggga
     2461 aaggcttggc agtgacggcc ggtctcaaac gcagccgtgg ccagaaggta ggccgcgacg
     2521 acgtttccct ggccgccccg tccgtgtatc cggacttcga tcatggcgtc cctcggaggt
     2581 ttgaacccac catgaccgag aggataaccc ccgcctgacc gattggctag ggagacggaa
     2641 ggaggaggcc tcctttacag cttctttccg ccggtgctgg cgccggcatc cagtccctgg
     2701 acgctggtca cccacgacat gctgttggcc gacagcgggt taccggtggt gggggcgcct
     2761 tccggcttgc tctcgcgctt ggcggcgccg cccttgccgt cggacaaggt catggggccg
     2821 aaggcgtagg aggcgaacac cgaggcggcg ccttgctcgc ccgacttgat ggaatggctg
     2881 tcctcgcgat cggcgcgctg ctgcatcaga acgtgggcgg gcgtggcgga aacggggtcc
     2941 atgggcttgc gctcctggga atgaaaaggc tggcgtttgc gatgcaggcg ccgtgccaga
     3001 agcgtaagtg aggaaatcca atgggttatc ggtgcgggtg ggcaaatcct gcccggttga
     3061 aaaggtttgc gacgggctct ttcttcctgt cacgtcttgg ggtataagcg gggcgcgcca
     3121 ccctatcgag tggggaaaat actaccatgg ctaagaagta cttcgttgtc ggcggcgagt
     3181 atgccgacac ctcgtttacc cagatcgccc ccggtgccaa ggaggagcgc ttcggcccct
     3241 tcgacgagca tgaagcgcat gtctgctggc gggcgctgac cggcaagacc gtggacaacg
     3301 ccatggtgcg ttattccatc cgcagcgacg aagcggccga gcaggaatgg ttcgtcatcg
     3361 gcggcgagta cgccgacacc ggcttcgagg tcatcgcgcc cggcaagtcc ctggaaaccc
     3421 acggcccgtt cagccgcaag gacgccatgg acaagtggcg ggcgctgacc ggccagaccg
     3481 tcgacaacgc catggtccgc tatgacctgt gcaccgccga cgagttgaag ctgcgccgat
     3541 aaatctggaa acgttctgat ttttcgggta tctcccctga atgtccttac agattcaggg
     3601 gagattttcc atgtcccata agtaccatgc cttcgtctgc ggccagagcc gcccggcggg
     3661 ccatccccgt ggctgctgca ccagcaaggg cgcccagccg ctgatggagc acctgatggg
     3721 caagttcatg cagaatcagt tgtgggaaaa gggcgtcagc gtcgcccagg ccagttgcct
     3781 gggcacctgc aacatgggtc cggtgatggt ggtctatccc gagggcgtgt ggtaccagcc
     3841 caagaccacg gccgacatcg acgagatcgt cgacagccat ttcggcaacg gcaaggtggt
     3901 cgagcgcctg cagttcaatc cgtgacgcgt ccgggtggcc gggtcagccc ggccgctcca
     3961 ccagcatggg cttgatcaat ccgaagaaca cggccggcgg gccgatgcct tcgtacatcc
     4021 agcccatatg ggcgccgcat tgcttgcaca gcgcgatgcg ccagtcgaag tccttgaacc
     4081 aggtgaactg
//
LOCUS       DATIKR010000199         3724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_63892, whole genome shotgun sequence.
ACCESSION   DATIKR010000199 DATIKR010000000
VERSION     DATIKR010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3724
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63892"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..1900)
                     /locus_tag="VLL76_02965"
     CDS             complement(59..1900)
                     /locus_tag="VLL76_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase"
                     /protein_id="HSV28484.1"
                     /translation="MRLLGISALYHDSAAALVEDGRIVAAAQEERFTRRKHDARFPKH
                     AIAYCLGEAGCTLADIDHVVFYDKPFLKFERLLETYLSFAPRGFRSFQTAIPVWLKEK
                     LFQKDLLRKEFQKFAKDFDWQTKLLFAEHHLSHAASAFFPSPFQDAAVLTMDGVGEWT
                     TTSLAMGSGNGLQIHKELHFPHSLGLLYSAFTYYTGFKVNSGEYKVMGLAPYGEPKYA
                     QQILDTVIDVKDDGSFWLDQSYFDYCTGLTMTNDRFAALFGQPVRRADKDPLTQFHMD
                     IAASVQAVTEHVVLKLARSIRAETGARNLCLAGGVALNCVANGKIVREGIFDNVWIQP
                     AAGDAGGALGAALAGYHIHKGQPRNVAGGGKDAMRGSYLGPVYEQADIEARLTEAGAR
                     FTVLSDDELIAATAQALADEKAVGWMQGRMEFGPRALGGRSILGDPRSPTMQKVLNLK
                     VKYRESFRPFAPSVLREDVAEWFELDGDSPYMLLVAPVQEKHRRAMTDEEQALFGIDK
                     LNVPRSELPAVTHVDYSARIQTVHADTNPRYHALISRFKALTGCGVVVNTSFNVRGEP
                     IVCTPEDAFRCFMGSEIEVLTVGNCFLRKEDQDPALKLDYKNAFELD"
     gene            complement(1913..2062)
                     /locus_tag="VLL76_02970"
     CDS             complement(1913..2062)
                     /locus_tag="VLL76_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HSV28485.1"
                     /translation="MAFVLELWAFLRARKKYWLLPILVMMALFGGLIVLSQGSAVAPF
                     IYTLF"
     gene            complement(2074..2505)
                     /locus_tag="VLL76_02975"
     CDS             complement(2074..2505)
                     /locus_tag="VLL76_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SxtJ family membrane protein"
                     /protein_id="HSV28486.1"
                     /translation="MSRTGTHESSAPVTEVEMGSERSFGFVFAAVFAVVSAWPLLSGA
                     APRWWALAVAAAFLAAALVAPRALRPLNLLWFRFGMLLHKIVTPLVMGLLFFLTITPI
                     GLLMRMTGKDPMRLKRDAAAASYWIGRTPPGPAPDTMKHQF"
     gene            complement(2582..3154)
                     /locus_tag="VLL76_02980"
     CDS             complement(2582..3154)
                     /locus_tag="VLL76_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HSV28487.1"
                     /translation="MDAAAFLDAQFAEHAETVAATRAAVAEPFSRLVSVCAAALDANN
                     KILFFGNGGSAADAQHLAAELVVRYRVNRRALGAIALTTDTSTLTACANDFSYDDVFS
                     RQIEALLRPGDVAIGISTSGTSPNVVRALRRAKELGGIAAGLTGRDGGDMRTLCDPVV
                     IVPSTVTARIQEMHILIGHALCDRLEAILG"
     gene            complement(3188..>3724)
                     /locus_tag="VLL76_02985"
     CDS             complement(3188..>3724)
                     /locus_tag="VLL76_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HSV28488.1"
                     /translation="RFASPKVAGLLELGTRYGDAYLLRRGMFMPWELPKVMEPDMARE
                     GWRALAPRLALEATCARIGPPRLKVGALETAWYMRNQLLRDSDWAGMAHSLEIRVPLV
                     DVALLRAVLPLAAGGRPPGKRDMAAAARPALPEAILGRPKTGFFVPVAQWLGAPSLRH
                     WARAVHSAWVLPRPPTIG"
BASE COUNT          619 a         1210 c         1324 g          571 t
ORIGIN      
        1 gacggcgacg acccaacacc aggccatcag gctgaggacg ccgctccgca tggcgccgtt
       61 agtccagctc gaacgcgttc ttgtagtcga gcttcagcgc cgggtcctgg tcttccttgc
      121 gcaggaagca attgccgacg gtcaagacct cgatctcgct gcccatgaag cagcggaacg
      181 cgtcctccgg ggtgcagacg atgggctcgc cgcgcacgtt gaagctggtg ttgaccacga
      241 cgccgcagcc ggtcagcgcc ttgaaccgcg agatcagggc gtggtagcgc gggttggtgt
      301 cggcatgcac ggtctggatg cgggcggaat agtccacgtg ggtcaccgcc ggcagctccg
      361 agcgcggcac gttcagcttg tcgatgccga acagcgcctg ttcctcgtcg gtcatggcgc
      421 ggcggtgctt ttcctgcacc ggggcgacca gcagcatgta ggggctgtcg ccgtccagct
      481 cgaaccactc ggccacgtcc tcgcgcagca cgctgggggc gaacgggcga aagctctcgc
      541 ggtatttgac cttgaggttc agcaccttct gcatggtggg cgaacgcgga tcgcccagga
      601 tcgagcggcc gcccagggca cgcggcccga attccatccg gccctgcatc caccccaccg
      661 ccttttcgtc ggccagggcc tgggcggtgg cggcgatcag ctcgtcgtcc gacagcacgg
      721 tgaatctggc gcccgcctcg gtcaggcgcg cctcgatgtc ggcctgctcg tagaccgggc
      781 cgagatacga cccgcgcatg gcgtccttgc cgccgccggc cacgttgcgc ggctggccct
      841 tgtggatgtg gtagccggcc agggcggcgc ccagggcgcc accggcgtcg ccggcggcgg
      901 gctggatcca cacgttgtcg aagatgccct cgcggacgat cttgccgttg gcgacgcagt
      961 tcagggccac gccgccggcc aggcagaggt tgcgggcgcc ggtctcggcg cggatcgagc
     1021 gcgccagctt cagcaccacg tgctcggtca ccgcctgcac cgacgcggcg atgtccatgt
     1081 ggaactgggt cagcgggtcc ttgtcggccc gacgcaccgg ctggccgaac agggcggcga
     1141 agcggtcgtt ggtcatggtc aggccggtgc aatagtcgaa atacgactgg tccagccaga
     1201 agctgccgtc gtccttgacg tcgatcaccg tgtccaggat ctgctgggcg tatttcggtt
     1261 cgccataggg cgccaggccc atgaccttgt actcgccgga attgaccttg aagccggtgt
     1321 agtaggtgaa ggcggaatac agcaggccca gcgaatgggg gaaatgcagt tccttgtgga
     1381 tctggaggcc gttgcccgaa cccatggcca gcgaggtggt ggtccactcg ccgacgccgt
     1441 ccatggtcag cacggcggca tcctggaacg gcgacgggaa gaaggccgac gccgcgtgcg
     1501 acaggtggtg ttccgcgaac aaaagcttgg tctgccagtc gaagtccttg gcgaacttct
     1561 ggaactcctt gcgcagcagg tctttctgaa acagtttttc cttcagccac accgggatgg
     1621 cggtctggaa cgaccggaac ccccggggcg cgaacgacag ataggtttcc agcagccgct
     1681 cgaacttgag gaacggcttg tcatagaaca cgacgtggtc gatgtcggcc agcgtgcagc
     1741 ccgcctcgcc caggcaatag gcgatggcgt gcttgggaaa gcgggcgtcg tgcttcctgc
     1801 gggtgaagcg ctcttcctgg gcggctgcga cgatccggcc gtcctcgacc agggcggcgg
     1861 cgctgtcgtg gtagagcgcg gaaatgccaa gcaggcgcac gggcgatccc tcttagaaca
     1921 gcgtgtagat gaacggcgcc accgccgagc cctggctcag cacgatcagg ccgccgaaca
     1981 gcgccatcat caccaggatg ggcagcagcc agtacttctt gcgcgcgcgc aggaacgccc
     2041 agagttcaag aacgaaagcc atcgcgggat ttcctagaat tggtgcttca tggtgtcggg
     2101 tgccggtccc ggcggggtgc ggccgatcca gtagctggcg gcggcggcat cgcgcttcag
     2161 gcgcatggga tccttgcccg tcatgcgcat cagcaggccg atcggggtga ttgtcaggaa
     2221 gaacagcagg cccatcacca gcggcgtgac gatcttgtgc agcagcatgc cgaagcggaa
     2281 ccacagcagg ttcagcggcc gcaaggcgcg cggggcgacc agggcggcgg ccaggaacgc
     2341 ggcggcgacc gccaatgccc accagcgcgg agcggcgccg gacaacagcg gccaggccga
     2401 gacgacggcg aacacggcgg cgaaaacgaa gccgaacgag cgttccgaac ccatctccac
     2461 ttcggtgacg ggggcgctcg attcgtgggt accggtgcgg gacatggcag ttacctctca
     2521 gggcgttcct taccattgcg gcgcatggcg gcaaaggaaa tttgtcgggc aggcgcgggc
     2581 ctcagcccaa gatcgcttcc agccggtcgc acagggcatg gccgatcagg atgtgcattt
     2641 cctggatgcg ggcggtcacg gtcgacggca cgatcaccac cgggtcgcac agcgtccgca
     2701 tgtcgccgcc gtcgcgtccg gtcaggccgg cggcgatgcc gcccagttcc ttggcgcggc
     2761 gcagggcgcg cacgacgttg gggctggtgc ccgaggtcga gatgccgatg gccacgtcgc
     2821 ccgggcgcag cagcgcctcg atctggcggc tgaacacgtc gtcatagctg aaatcgttgg
     2881 cgcaggcggt cagcgtcgag gtatcggtgg tcagcgcgat ggcgcccagg gcgcggcggt
     2941 tgacgcgata gcgcaccacc agttccgccg ccagatgctg ggcgtcggcg gcgctgccgc
     3001 cgttgccgaa gaacaggatc ttgttgttgg cgtcgagcgc ggcggcgcag accgacacca
     3061 gccgggagaa gggttcggcc acggcggccc gcgtcgcggc gacggtctcg gcgtgttcgg
     3121 cgaattgggc gtcgaggaag gcggctgcgt ccatgaaacc tgctcctggg aaacgtgctg
     3181 acaagcacta cccgattgtg ggaggccggg gcaacaccca ggcggaatgg accgcccgcg
     3241 cccaatggcg cagcgacggc gcgcccagcc attgcgccac cggcacgaag aacccggtct
     3301 tggggcggcc aaggatggcc tcgggcaggg cgggtctggc agcggcggcc atgtcgcgct
     3361 tgcccggcgg ccgtccgccg gccgccagcg gcagcactgc gcgcagcagc gccacatcga
     3421 ccagcggcac ccggatctcg agggaatggg ccatgccggc ccagtcggaa tcgcgcagca
     3481 gctggttgcg catgtaccac gccgtttcca gggcgccgac cttgagccgg ggcggcccga
     3541 tgcgggcgca ggtggcctcg agcgccagcc ggggcgccag cgcccgccag ccctcgcggg
     3601 ccatgtcggg ctccatcacc ttgggcagct cccacggcat gaacatgccg cgccgcagca
     3661 gataggcgtc gccgtagcgc gtccccaatt ccagcaggcc ggcgaccttg ggcgaggcga
     3721 agcg
//
LOCUS       DATIKR010000200         3319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_39571, whole genome shotgun sequence.
ACCESSION   DATIKR010000200 DATIKR010000000
VERSION     DATIKR010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39571"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VLL76_02990"
     CDS             complement(<1..462)
                     /locus_tag="VLL76_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008622239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV28489.1"
                     /translation="MTTGDKAATTGRSPRLAVRRLTLTDFRCYAHLRLDTDPRPVVLT
                     GPNGAGKTNLLEALSFLTPGRGLRRATLSDVARQAAGPGAPWAVAAVLDGPAGTRDVG
                     TGREQGSERRAVRVDGQPAKPGDLADIASALWLTPAMDRLFIEGAGGRRRFL"
     gene            complement(459..1577)
                     /gene="dnaN"
                     /locus_tag="VLL76_02995"
     CDS             complement(459..1577)
                     /gene="dnaN"
                     /locus_tag="VLL76_02995"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HSV28490.1"
                     /translation="MKLTIERAQLLKSLTHVQSVVERRNTIPILSNVKLEGRPGSLSL
                     NATDMDLDFVETVPADVSRPGATTAPAHTLFEIVKKLPDGSQVEIDYSAEDGQLTLRS
                     GRSKFSLACLPVEDFPVLSGGELPHSFVLTASELKALIDRTRFAISTEETRYYLNGIY
                     LHAATGASGDVLRAVATDGHRLARAEVTLPEGAAGMPGVIVPRKTVGEIYKLIGETDT
                     EITVSLSETKLRFAFGDALLTSKLIDGTFPDYERVIPVDNDKILEVEVKSFASAVDRV
                     SAISTEKSRAIKLAVDKGNVTLSASSPESGSATEEVEGSYDASPIEIGFNSRYLLDIL
                     AQVEGGSAQFAMADAASPTVVRDVADGAAIYVLMPMRV"
     gene            complement(1709..3073)
                     /gene="dnaA"
                     /locus_tag="VLL76_03000"
     CDS             complement(1709..3073)
                     /gene="dnaA"
                     /locus_tag="VLL76_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HSV28491.1"
                     /translation="MSNIEWDRVKGRLKDEVGDAAYRSWLRPITLHDVRDGAVRLSLP
                     TRFMRDWVATHYADRIKTLWGAENPAIRAVEIVVGASRAAEPAAPQAETAASAPAPRV
                     AAAPCAPTEQDELGAQLDPRYTFKNFVVGKPNEFAYAAANRVAEASAVSFNPLFLYGG
                     VGLGKTHLMHAIAWHIKEHNPARRVLYLSAEKFMYRFIRALRSQDTMSFKEQFRSVDV
                     LMVDDVQFIAGKDATQEEFFHTFNALVDQGRQIVISSDKSPSDLEGMEDRLRSRLSSG
                     LVADIHATTYELRLGILQSKAEQMGVIVPPKVTEFLAHKIASNVRELEGALNRVVAHS
                     QLVGRSITLETTQEVLHDLLKASDRRITIEEIQKRVAEHFNIKLAEMSSARRSRQVAR
                     PRQVAMYLAKQLTSRSLPEIGRKFGGRDHTTVMHAVKKVEELKGADQNFSEDVELLRR
                     MLQG"
BASE COUNT          499 a         1091 c         1178 g          551 t
ORIGIN      
        1 gaggaagcgt cggcgccccc ccgcgccctc gatgaacaac cggtccatgg ccggcgtcag
       61 ccacagcgcc gaggcgatgt cggccagatc gccgggcttg gccggctggc cgtcaacccg
      121 taccgcgcgc cgctcggaac cctgctcgcg gccggtcccc acgtcccgcg tacccgccgg
      181 cccgtccagc accgccgcca ccgcccaggg ggcgcccggc ccggcggcct ggcgggccac
      241 gtcggacagg gtggcgcggc gcaggccgcg accgggggtc aggaacgaca acgcctccaa
      301 caggttggtc ttgccggcgc cgttgggtcc cgtcagcacc accggccggg gatcggtgtc
      361 caggcgcaga tgcgcatagc accggaaatc ggtcagggtg aggcggcgaa ccgccaggcg
      421 cggcgaccgt cccgtggttg ctgccttgtc gcccgtggtc acacccgcat cggcatcaac
      481 acatagatgg cagcgccgtc ggcgacgtcc cgcaccacgg tcgggctggc ggcgtcggcc
      541 atggcgaact gggcggagcc gccttcgacc tgggccagga tgtcgagcag gtagcgcgag
      601 ttgaagccga tctcgatggg gctggcgtcg tagctgccct cgacctcttc cgtcgccgag
      661 ccgctttccg ggctggaggc cgacagggtg acgttgccct tgtccaccgc cagcttgatg
      721 gcgcggctct tctcggtcga gatggccgac acgcgatcga cggcgctggc gaacgacttg
      781 acctcgactt ccaggatctt gtcgttgtcg accgggatca cccgctcgta atcggggaag
      841 gtgccgtcga tcagcttcga ggtcagcagg gcgtcgccga aggcgaagcg cagcttggtc
      901 tcggacagcg acacggtgat ctcggtgtcg gtctcgccga tcagcttgta aatctcgccc
      961 acggtcttgc gcggcacgat cacgcccggc atgccggcgg cgccctcggg cagcgtgacc
     1021 tcggcgcggg ccaggcggtg gccgtcggtg gcgacggcgc gcagcacgtc acccgaggcg
     1081 ccggtggcgg cgtgcaggta gatgccgttg aggtagtagc gagtctcttc ggtcgagatg
     1141 gcgaagcggg tgcggtcgat cagcgccttc agctcggacg cggtgagcac gaagctgtgc
     1201 ggcagctcgc cgccagacag caccgggaag tcctcgaccg gcaggcaggc cagcgagaat
     1261 ttcgaccggc ccgagcgcag cgtcagctgg ccgtcctcgg cggaatagtc gatctcgacc
     1321 tggctgccgt cgggcagctt cttgacgatc tcgaacaggg tgtgggccgg tgccgtggtg
     1381 gcgcccgggc gggacacgtc ggccgggacg gtctcgacga agtccaggtc catgtcggtg
     1441 gcgttcagcg acaggctgcc ggggcgcccc tcgagcttca cgttggacag gatcggaatg
     1501 gtgttgcgcc gctcgacgac actttggacg tgggtcaggg acttcagcag ctgggcgcgc
     1561 tcgatggtca gcttcatggc ttgtcgcgac gatccggtta tagatcttcc accccaccct
     1621 ctgcggggct gggcagtata tcacaagtgt ttgggaccca aagcggattc acgcgcgaac
     1681 cgggaggcgc gggcggcccc ccgttcgatc agccctgcag catgcggcgc agcagttcca
     1741 cgtcttccga gaagttctgg tcggcgccct tgagctcctc gaccttcttg accgcgtgca
     1801 tcaccgtggt gtggtcgcgg ccgccgaact tgcggccgat ctcgggcaag ctgcggctgg
     1861 tcaactgctt ggccaggtac atggcgacct ggcgcggacg ggcgacctgg cgcgagcgcc
     1921 gggccgacga catttccgcc agcttgatat tgaaatgctc ggcaacgcgc ttttggatct
     1981 cctcgatggt gatccggcgg tccgacgcct tcagcaggtc gtgcagcact tcctgggtgg
     2041 tttccagggt gatggagcgg ccgaccaact gggaatgggc gacgacgcgg ttgagcgcgc
     2101 cttccagttc gcggacgttg ctggcgatct tgtgggccag gaactcggtg accttgggcg
     2161 gcacgatcac gcccatctgc tcggccttgg actgcaggat gcccaggcgc agctcgtagg
     2221 tggtggcgtg gatgtcggcg accaggccgg aactcaggcg cgaccgcagc cggtcctcca
     2281 tgccctccag gtccgacggc gacttgtccg acgagataac gatctggcgg ccctggtcga
     2341 ccagggcgtt gaaggtgtgg aagaattctt cctgggtggc gtccttgccg gcgatgaatt
     2401 ggacgtcgtc gaccatcagc acgtcgaccg agcggaactg ctccttgaac gacatggtgt
     2461 cctggctgcg cagcgcccgg atgaagcggt acatgaactt ctcggccgac aggtacagca
     2521 cccggcgcgc cgggttgtgc tccttgatgt gccaggcgat ggcatgcatc aggtgggtct
     2581 tgcccaggcc gacgccgcca tacaggaaca gcgggttgaa cgacaccgcg ctggcctcgg
     2641 cgacgcggtt ggcggcggcg taggcgaatt cgttgggctt gccgacgacg aaattcttga
     2701 aggtgtagcg gggatcgagc tgggcgccca attcgtcctg ctcggtgggc gcgcacgggg
     2761 cggcggcgac gcgcggagcg ggggcggaag cggccgtctc ggcctggggc gcggccggtt
     2821 cggcggcgcg gctggcgccc accacgatct cgacggcgcg gatggcgggg ttctcggcgc
     2881 cccacagtgt cttgatgcgg tcggcgtaat gggtggcgac ccagtcgcgc atgaagcggg
     2941 tgggcagcga caggcgcaca gcgccgtcac gaacgtcgtg cagggtgatg gggcgcagcc
     3001 agctgcggta agcggcgtcc cccacctcgt ccttgaggcg gcccttgacg cgatcccact
     3061 cgatattgct catgacctgt ccccgaattc tacctgccga gcccagcgcg cccgcctgga
     3121 ctggcgaacg atttgagccc cctgcgccgg gcgagggact gttggcaacg gcccatttcc
     3181 ccctcctttg ccggatgtcc cgcgccaagg aaggacgccg cccccggcgc ctgcccctgc
     3241 gatgcggccc gaccccaaac cggcccgcct cgacctcgag actatcccgt acgtactaac
     3301 cgaaagcgca tgaacctgt
//
LOCUS       DATIKR010000201         1665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_39572, whole genome shotgun sequence.
ACCESSION   DATIKR010000201 DATIKR010000000
VERSION     DATIKR010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39572"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1665)
                     /locus_tag="VLL76_03005"
     CDS             complement(<1..>1665)
                     /locus_tag="VLL76_03005"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HSV28492.1"
                     /translation="GLGRETAIKADAVLREVPFDSLPQLWPAVVAPNAREWVVANLSK
                     GVAHEARATLSARSASGRFDDVVVEHVEGGLEGDGVTVDYLRPMPVVKNAAASASFDA
                     KDFRITVKGGEVYGLRLKDGLIVLGGLDQEDQHADIDLTIAGPAADALKLIDNQPLRY
                     AQALGIDPASVGGDATTRLRLKFPLLKNLRLDDLAIKAHSSLKGVSIPKVVMGLDLAR
                     GDLEIDVDAKGLDASGPVVLGTIPADLKWRENFSARNVPFRSRYTLRAPSVDEEQRKM
                     LGLDGVPFVSPFISGPVAADVVATLFGGGKGDIEAKVDLSPARMKLPGMGWRKEDRTT
                     GGARVLVRLEKMKLASVPRFEVQAGDLNTRGSVAFGPDGSARRVEFERLAYGKTDVSG
                     SLSLRPGGGMDIAFKGSSFNAEPLIGSDDEDEQLQPAPPADGRKQRRKSDLPPMTVSG
                     SVGTMWMSEKGGLTNANVHLSRDAEEWRSMTIKGIVGAGKSFTAELRQAGPGRRDVTV
                     RSDDAGAVAKAFDVYDDLMGGKLEIDGYYDDTKDEQPVVGKVRVTD"
BASE COUNT          233 a          575 c          585 g          272 t
ORIGIN      
        1 aatcggtgac gcggaccttg ccgacgaccg gctgttcgtc cttggtgtcg tcgtaatagc
       61 cgtcgatttc cagcttgccg cccatcaggt cgtcgtagac gtcgaacgcc ttggcgacgg
      121 cgccggcgtc gtcggaccgg acggtgacgt cgcggcgccc cggcccggcc tggcgcaact
      181 cggcggtgaa gctcttgccg gcgccgacga tgcccttgat ggtcatcgac cgccattcct
      241 cggcgtcgcg cgacagatgg acgttggcgt tggtcaggcc gcccttttcc gacatccaca
      301 tggtgccgac cgatccggac accgtcatgg gcggcaggtc gctcttcctg cgctgcttgc
      361 ggccgtcggc gggcggggcc ggctgcagct gctcgtcctc gtcgtccgag ccgatcagcg
      421 gctcggcgtt gaagctggag cccttgaagg cgatgtccat gccgccgccc gggcgcaggc
      481 tgaggctgcc cgatacgtcg gtcttgccat aggccaggcg ttcgaactcg acccggcggg
      541 ccgagccgtc ggggccgaac gccaccgaac cgcgcgtgtt gaggtcgccg gcctggacct
      601 cgaagcgcgg caccgaggcc agcttcatct tttccagccg caccagcacg cgggcgccgc
      661 cggtggtgcg gtcctccttg cgccagccca tgccgggcag cttcatgcgg gcgggggaca
      721 gatcgacctt ggcctcgatg tcgcccttgc cgccgccgaa cagggtggcg accacgtcgg
      781 cggcgacggg gccgctgatg aagggcgaca cgaatggcac gccgtcgagg cccagcatct
      841 tgcgctgctc ctcgtccacc gagggggcgc gcagagtata gcggctgcgg aagggcacgt
      901 tcctggccga gaaattctcg cgccatttca ggtcggccgg gatggtgccc agcaccaccg
      961 gccccgaggc gtcgagcccc ttggcgtcca cgtcgatctc caggtcgccg cgggccaggt
     1021 ccagccccat caccaccttg gggatggaca cgcccttcag cgacgaatgg gccttgatgg
     1081 ccaggtcgtc gaggcgaagg ttcttcagca gcgggaactt gagccgcagg cgggtggtgg
     1141 cgtcgccgcc gaccgaggcg gggtcgatgc ccagcgcctg ggcatagcgc agcggctggt
     1201 tgtcgatcag cttcaacgcg tcggctgccg ggccggcgat ggtcaggtcg atgtcggcgt
     1261 gctggtcttc ctggtccagg ccgcccagca cgatcaggcc gtccttgagg cgcagtccat
     1321 agacctcgcc gcccttgacg gtgatgcgga aatccttggc gtcgaagctg gcgctggcgg
     1381 cggcgttttt gacgaccggc atgggacgca ggtaatcgac ggtgacgccg tcgccttcca
     1441 gcccgccctc gacgtgctcg accaccacgt cgtcgaagcg gcccgaggcc gagcgcgccg
     1501 acagggtggc gcgggcctcg tgggcgacgc ccttggacag gttggcgacg acccattcgc
     1561 gggcattggg cgccaccacc gccggccaca attgcggcaa ggaatcgaac ggcacctcgc
     1621 gcagcacggc gtcggccttg atcgccgtct cgcgacccag gccct
//
LOCUS       DATIKR010000202         2255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_27219, whole genome shotgun sequence.
ACCESSION   DATIKR010000202 DATIKR010000000
VERSION     DATIKR010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27219"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..94)
                     /locus_tag="VLL76_03010"
     CDS             complement(<1..94)
                     /locus_tag="VLL76_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020543069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSV28493.1"
                     /translation="MKQVTDTTFEAEVLKSSTPVLVDFWAEWCGP"
     gene            295..900
                     /locus_tag="VLL76_03015"
     CDS             295..900
                     /locus_tag="VLL76_03015"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV28494.1"
                     /translation="MSNPQILDRRSFENGKPIFSEGERGDAAYVVESGEVGIYKEIDG
                     EVVKLGTIKQGGIFGEMAVIDGTPRMATALAEGHVVLVRVPKGVFDQKIAACDPFIRG
                     LITIFLNNIRASHKLYNKRPRSLHDYIKMLDAYTLDIRTYVNEVNVEDFSADTVQALE
                     ELVAAVQKVKTVTRGHTDRRHSVLKDDDLKGVSLRAVLDKG"
     gene            1222..1344
                     /locus_tag="VLL76_03020"
     CDS             1222..1344
                     /locus_tag="VLL76_03020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28495.1"
                     /translation="MTTKITQAAEPKTAAPAAPSAKADDAEIQRQRRAKIALGL"
     gene            complement(1341..>2255)
                     /locus_tag="VLL76_03025"
     CDS             complement(1341..>2255)
                     /locus_tag="VLL76_03025"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSV28496.1"
                     /translation="PLDCRPGETCWLMNLPDTDPGPAARDFRCRPRSYDKHDGTDLAV
                     ADLRAMQAGVAVRAAAAGTVLQTRDGEEDGRWLRGDGAAIRAAKRECGNRVAIAHGDG
                     WVTDYCHLKQGSVIVKKGDKVAAGQAIGQVGLSGMTEFPHVHLGLLRFAPGQNTGVAV
                     DPFTGVALSEGCGKPAGGLWNGLGYQPVALYAVGLADHVPAAEALKSDSATPEAMPRT
                     APALVVWGTMFGVAPGDKVTMTLQGPDGAVIDTKAVSLDRDQAWHMRAFGKKTPPGGW
                     PAGRYVGRVTLEREGEPPQAREAAIVLR"
BASE COUNT          378 a          825 c          728 g          324 t
ORIGIN      
        1 aggggccgca ccattcggcc cagaaatcca ccagcaccgg ggtggaggac ttcagaacct
       61 cagcttcgaa cgtggtgtcg gtcacttgct tcatcgccgg tatccttgct catgatcgtg
      121 ggggcgtcgc ccggatttgc ccgtatggta gaaagccccg gcgagggcgt caaggcgcca
      181 cccctggccc cagtcatatg gtgaagccgg cgatgccgcg ccaggggtcc gaaacctttg
      241 accccggccc gggccggtgg catcaatgcg ggcgcaagca cgattgaagg cgccatgagc
      301 aatccgcaga tcctcgaccg ccgcagcttc gagaacggca agcccatctt cagcgagggc
      361 gagcgcggcg acgccgccta tgtggtcgaa agcggcgagg tcggcatcta caaggagatc
      421 gacggcgagg tcgtcaagct cggcaccatc aagcagggcg gcatcttcgg cgagatggcg
      481 gtgatcgacg gcacgccccg catggccacc gccctggccg agggccacgt ggtgctggtg
      541 cgggtgccca agggggtgtt cgaccagaag atcgcggcct gcgatccgtt catccgtggc
      601 ctgatcacca tcttcctcaa caacatccgc gccagccaca agctgtacaa caagcggccg
      661 cgcagcttgc acgactacat caagatgctg gacgcctata ccctggacat ccgcacctac
      721 gtgaacgagg tcaacgtcga ggatttctcg gccgacaccg tgcaggcgct ggaggagctg
      781 gtggccgccg tgcagaaggt caagaccgtg acgcgcggcc acaccgaccg ccgccattcg
      841 gtgctgaagg acgacgacct caagggcgtc agcctgcgcg ccgtgctcga caagggctga
      901 cccggtcggc ccttggccga ccggcaagcc cgagcggcgt ttgagcctag agcattttcc
      961 gctctgacca agtcagagcg gaaaatgcga taagcccgag cggcatctga gcctggctcg
     1021 ccccggaggg gcggccgcca aaggcaaacc tagaggcgtc acctgaccca tggtcaggtg
     1081 actgggccgg gcggtataac cgccgcaatc ccgccacgat tgcgtccgca attcggacac
     1141 gatgctaatc catattcgcg ttcgtcaggg ggacgcgccg ccgcctggcc accgcaacga
     1201 ggcgccggac gacgaagcat catgaccacc aagatcaccc aggccgccga acccaagacc
     1261 gccgctcccg ccgccccgtc ggccaaggcc gacgacgccg agatccagcg ccagcggcgc
     1321 gccaagatcg ccctgggcct ttaacgcagg acgatcgcgg cctcccgcgc ctggggcggc
     1381 tccccctccc gctccagcgt cacccgcccg acatagcgcc ccgccggcca ccctcccggc
     1441 ggggttttct ttccgaaggc ccgcatgtgc cacgcctggt cgcgatccag gctcaccgcc
     1501 ttggtgtcga tcaccgcgcc gtcgggtccc tgcagggtca tcgtcacctt gtcgcccggc
     1561 gccaccccga acatcgtccc ccacaccacc agggccggcg ccgtgcgcgg catcgcctcg
     1621 ggcgtcgcgc tatcggactt cagcgcctcg gcggcgggaa cgtggtcggc cagaccgacc
     1681 gcgtacagcg ccaccggctg gtagccgagg ccgttccaca ggccgccggc cggcttgccg
     1741 cagccctcgg acagggccac gccggtgaag ggatcgaccg ccacgcccgt gttctgaccg
     1801 ggtgcgaaac gcagcagtcc caggtggaca tgcgggaact cggtcatccc cgacagcccg
     1861 acctggccga tggcctggcc ggcggcgacc ttgtcgccct ttttgacgat caccgagccc
     1921 tgcttcaggt ggcagtaatc ggtgacccag ccgtcgccat gggcgatcgc cacccggttg
     1981 ccgcattccc gcttggccgc ccggatcgcc gccccgtcgc cgcgcagcca gcgcccgtct
     2041 tcctcgccat cgcgggtctg cagcaccgtg ccagccgccg ccgcccgcac cgccacgccc
     2101 gcttgcatcg cccgcaagtc ggccaccgcg aggtcggtgc cgtcgtgctt gtcgtagctg
     2161 cgcggccggc agcggaagtc gcgcgcggcg gggccgggat cggtgtcggg caggttcatc
     2221 agccagcagg tctcgcccgg ccggcagtcg agcgg
//
LOCUS       DATIKR010000203         5874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_148494, whole genome shotgun sequence.
ACCESSION   DATIKR010000203 DATIKR010000000
VERSION     DATIKR010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5874
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148494"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..1580)
                     /locus_tag="VLL76_03030"
     CDS             complement(66..1580)
                     /locus_tag="VLL76_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HSV28497.1"
                     /translation="MGNVTLLEFLSAGREVPGHKPWPRFQLDARTWRKMVEQMAVSNW
                     QVLAEWGEPAEVHVLLRGEDSGAIAVASHPCPDHKFFALGQVRPSAIRRERAIRDLWG
                     LVPEGLEDQRPWLDHGKWEVRNPLGSPRLNDRRPHAYHFLAAEGEGLHQIPVGPVHAG
                     VIEPGHFRFHAQGETVVRLEERLGYVHKGIEGLMAGKPLADAARIVGRVSGDATVAYQ
                     LAFARAVEAALGIEVPPRAVWLRALMAELERVANHVFDIGAICNDAAFAIMLSHMGVL
                     REKVLRANDACFGHRLLMDRIVPGGVTHDLPDEGWEVLKHLLPSLRKKFERAMRLYEG
                     SPSLLDRTNGTGFVPGALVHRFGAGGFVGRASSRGLDARKEPGYPPYDQLDFAVPVHA
                     EGDVHARIMVRADEIRASLRLIDQILSNLPRGALTAPVPTRAGEGVAIVESFRGDVVV
                     WVRVSEAGKIVRCHPHDPSWFQWPLLEAAIEGNIVADFPLCNKSFNCSYSGHDL"
     gene            complement(1580..3052)
                     /locus_tag="VLL76_03035"
     CDS             complement(1580..3052)
                     /locus_tag="VLL76_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HSV28498.1"
                     /translation="MTLPGLDNPILWILAVPLGAAGFLAVLPNWRLATWLNVLLSGLT
                     FAASLVLFHHRPEPTRLFFIDDFNVYLVVLTCFVGLTTAIFSAAYIARESAGERLSDA
                     HLRFYHSMYQAFMFTMLLALTANNTGVMWVAVEAATLTTVLMVSLYRTREAIEAAWKY
                     FILCSVGIGLALFGTTLVYLAAQPIMGDGADAMAWTLLVARAGAFQPDLLNLAFVFVL
                     VGYGTKVGLAPLHAWLPDAHAEGPTPISAVLSGLLLNVALYALLRFKMIISANPNTLA
                     PGPMMIVMGLSSLFVAGFMLYRRGDIKRLFAYSSIEHMGVITIAFGLGGALANFAGLL
                     HMTMHSLTKSAIFFAVGVITQNAGTKRIADIRGLTVTHPVLGWGFVIAVLAIAGMPPM
                     GVFMSEFLVLGAAFTDQPLLALPLALGLLLAFGALVTRLQGLAFGEPGALAGYGPAGR
                     VSTALVHLPLWSHLLLVVVAGLYLPEPLVKWFQNVARLLG"
     gene            complement(3049..3711)
                     /locus_tag="VLL76_03040"
     CDS             complement(3049..3711)
                     /locus_tag="VLL76_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-4 component E"
                     /protein_id="HSV28499.1"
                     /translation="MGQLSYEVAHLIGATMLMAGFALLYQRRLFAVLNTFAFQALALA
                     AAAAWQAHVQDAPHLYATAAIALVFKALLVPFALHWLVDKLGIHRTVDTALSIGWTMI
                     VGVALVALSILLVLPVTASAAALTRESLAVAMSVVLLGMLMMITRRNAVTQVVGFMAL
                     ENGLLLAAVSAKGMPLVVEISIAFSVLIAMTLFGIFFFRIRERFDTLDLHYLETYRGD
                     RQ"
     gene            complement(3833..4780)
                     /locus_tag="VLL76_03045"
     CDS             complement(3833..4780)
                     /locus_tag="VLL76_03045"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HSV28500.1"
                     /translation="MTAILWQMVQIVLVVALAPLVTGYVRLVKSRLNGRAGPSPLQPY
                     RDLWRLLQKEAVVAHSASLLFRAAPYVTFAAVWLAACVVPTFTTNMAFAPAADLIALV
                     ALLGLARFWTALAGMDVGTAFGGLGASREMLIASLAEPAMLMVTFSLSLVAGTTQPAQ
                     IVAFVLSGNVGVEVSLGLALAAMVMVAIAENGRIPIDNPATHLELTMVHEAMVLEYSG
                     RHLAMMELAGMVRLTLFMALIACLFAPWGMAQPGAGPVGVAIGLGAFLTKVFLLATAL
                     ALFETSIAKMRVFRYADFLGGALLLGLLATIFLYVSEAV"
     gene            complement(4777..>5874)
                     /locus_tag="VLL76_03050"
     CDS             complement(4777..>5874)
                     /locus_tag="VLL76_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HSV28501.1"
                     /translation="NMGIITLGLGLGFCALSAGLPGPAALGLAGALVHALNHAAMKGL
                     LFLGAGAVMTATGERSLGALGGLLKRMPWTGTAVLVGAAAISALPPLNGFVSEWLIFQ
                     TLFKGPVLPHWAMKFGVPVVGAFLAFAAALAATCFVRAYGIAFLGRPRTEAAREAGEV
                     TFGMRLSMAALAGLCVVLGAIPVTVTTLLSDVVQPLTGVNFAVSADLGWPWLSPVGPG
                     RGSYSGTVLVLMGLALFGITILLVHRWGTTALRRADAWDCGHPEDIPETQYTGHSFAQ
                     PMRRAFAHTIFKARETVEMPEPGDESPARHRVHMIDPVWDGLYLPLARVVGWFADQVN
                     RMQYLTVRRYLLMMFSTLVILLLVVAVRQKL"
BASE COUNT         1110 a         2012 c         2018 g          734 t
ORIGIN      
        1 aagcacgtgg atggccgggt caagcccggc catgacgcgg cattggggga tgaccatccc
       61 ttccatcaca ggtcatgccc cgagtaggag cagttgaagc tcttgttgca cagggggaag
      121 tcggcgacga tgttgccctc gatggcggct tccagcagcg gccattggaa ccacgacggg
      181 tcgtggggat ggcaacgcac gatcttgccg gcttccgaca cccgcaccca caccaccacg
      241 tcgccacgga agctttcgac gatggcgacg ccttcgccgg cccgcgtcgg caccggcgcg
      301 gtcagggcgc cacgcggcag gttggacagg atctgatcga tcaggcgcag gctggcgcgg
      361 atttcgtcgg cgcgcaccat gatgcgggca tggacgtcgc cctcggcatg gaccggcacg
      421 gcgaaatcca gttggtcata gggcggatag cccggttcct tgcgggcgtc gaggccgcgt
      481 gacgaggcgc ggccaacgaa gccgccggcg ccgaagcggt ggaccagggc gccgggcacg
      541 aagccggtgc cgttggtgcg gtcgagcagc gacggcgagc cctcgtacag ccgcatggcg
      601 cgctcgaact tcttgcgcag cgacggcagc aggtgcttca gcacctccca cccttcgtcg
      661 ggcagatcgt gggtgacgcc gccgggaacg atgcggtcca tcagcaggcg gtggccgaag
      721 caggcatcgt tggcgcgcag caccttctcg cgcaacacgc ccatgtggct gagcatgatg
      781 gcgaaggcgg cgtcgttgca gatggcaccg atgtcgaaga cgtggttggc gacgcgctcc
      841 aactcggcca tcagggcgcg cagccatacc gcgcggggcg gcacctcgat gcccagcgcc
      901 gcttcgacgg cgcgggcgaa ggccagttga taggccaccg tcgcatcgcc cgacacccgg
      961 ccgacgatgc gggcggcgtc ggccagcggc ttgccggcca tcaggccctc gatgcccttg
     1021 tggacatagc ctagccgttc ctcgagccgc accaccgtct cgccctgggc atggaagcgg
     1081 aaatggcccg gttcgatcac gccggcatgg acggggccga ccgggatctg gtgcagcccc
     1141 tcgccctcgg cggcgaggaa atgatacgca tgcggccggc ggtcgttgag gcggggcgag
     1201 cccagcggat tgcgcacctc ccacttgccg tgatcgagcc acgggcgctg gtcctccagc
     1261 ccctcgggca ccaggcccca caggtcgcgg atggcgcgct cgcgccggat cgccgacggc
     1321 cgcacctggc cgagcgcgaa gaacttgtgg tcgggacagg gatgcgaggc caccgcgatg
     1381 gcgccggaat cctcgccgcg cagcagtacg tgcacctcgg ccggctcgcc ccattcggcc
     1441 agcacctgcc agttggacac cgccatctgc tcgaccatct tgcgccaggt cctggcatcg
     1501 agctggaagc gcggccacgg cttgtggccc ggcacctcgc ggcccgccga caggaactcc
     1561 agcagggtga cgttgcccat catcctagaa gcctcgccac gttctggaac catttcacca
     1621 agggttcggg caggtacagg cccgccacca ccaccaacag caagtgggac cacagcggca
     1681 gatggaccag ggccgtcgat acgcggccgg ccggaccata gcccgccaac gcccccggct
     1741 cgccgaaggc cagcccctgc aaccgcgtca ccagggcgcc gaacgccagc aacaggccca
     1801 gcgccagcgg cagggccagc agcggctggt cggtgaaggc ggcgcccagg accaagaatt
     1861 cgctcatgaa cacacccatg ggcggcatgc cggcgatggc cagcaccgcg atcacgaagc
     1921 cccagcccag caccggatgg gtcaccgtca ggccgcggat gtcggcgatg cgcttggtgc
     1981 cggcattctg ggtgatgacg ccgacggcga agaagatggc cgacttggtc agcgagtgca
     2041 tggtcatgtg cagcaggccg gcgaaattcg ccagcgcccc gcccagtccg aaggcgatgg
     2101 tgatgacgcc catgtgctcg atcgaggaat aggcgaacag ccgcttgatg tcgccgcgcc
     2161 ggtacagcat gaagccggcg acgaacaggc tcgacagccc catcacgatc atcatcggcc
     2221 ccggcgccag cgtgttggga ttggccgaga tgatcatctt gaagcgcagc agggcgtaca
     2281 aggccacgtt cagcagcagg cccgacagca ccgccgagat cggcgtcggg ccctcggcgt
     2341 gggcgtcggg cagccaggcg tgcagcggcg ccaggccaac cttggtgcca tagcccacca
     2401 gcacgaacac gaaggccagg ttcagcagat cgggctggaa ggcgccggcg cgggcgacca
     2461 gcagcgtcca cgccatggcg tcggcgccgt cacccatgat cggctgcgcc gccagataga
     2521 ccagggtggt gccgaacagc gccaggccga tgcccaccga gcacaggatg aagtatttcc
     2581 acgccgcctc gatggcctcg cgggtgcggt acaggctgac catcagcacg gtggtcagcg
     2641 tcgccgcctc gaccgccacc cacatgacac cggtgttgtt ggcggtcagc gccagcagca
     2701 tggtgaacat gaaggcctgg tacatggagt ggtaaaagcg cagatgcgcg tccgacagcc
     2761 gctcgcccgc cgattcgcgg gcgatgtagg cggccgagaa gatggcggtg gtcaggccga
     2821 cgaagcaggt cagcaccacc aggtaaacgt tgaagtcgtc gatgaagaac agccgagtcg
     2881 gctcgggccg gtggtggaac agcaccaggc tggcggcgaa ggtcaaaccc gacagcagga
     2941 cgttgagcca ggtcgccagc cgccagttgg gcagcaccgc caggaagccg gcggcgccca
     3001 gcggcaccgc caggatccac aggatggggt tgtcgaggcc ggggagcgtc attgccggtc
     3061 tccccgatag gtttccagat agtgcaggtc caaggtgtcg aaccgctcgc ggatgcggaa
     3121 gaagaagatg ccgaacagcg tcatggcgat cagcaccgaa aaggcgatcg agatctcgac
     3181 caccagcggc atgcccttgg ccgacacggc ggccagcagc agcccgttct cgagcgccat
     3241 gaagcccacc acctgggtca ccgcgttgcg ccgggtgatc atcatcagca tgcccaagag
     3301 cacgacgctc atggccaccg ccaggctttc gcgggtcagc gcggcggcgc tggcggtcac
     3361 cggcaacacc agcaggatcg acagcgccac cagcgcgaca ccgacgatca tggtccagcc
     3421 gatggacaag gcggtgtcga cggtgcggtg gatgcccagt ttgtccacca gccaatgcag
     3481 cgcgaacggc accagcagcg ccttgaacac caatgcgatg gcggcggtgg cgtaaaggtg
     3541 gggcgcgtcc tggacatgcg cctgccaggc cgccgccgcc gccagcgcca gggcctggaa
     3601 ggcgaaggtg ttgagcacgg cgaacaggcg gcgctggtac agcagggcga agccggccat
     3661 cagcatggtg gcgccgatca ggtgggcgac ttcataggaa agctgcccca tcacaccgcc
     3721 tccgcccgcg cgctgtcatc ccgagcgcag ccgagggatc tttcagccgc cgacggctgc
     3781 cgcttcgggg tgaaagaccc ttcgcaccgc tcagggtgac aagccacagc catcacaccg
     3841 cctccgagac gtagaggaag atcgtcgcca gcaggcccaa cagcagcgcg ccgcccagga
     3901 agtcggcgta gcggaacacc cgcatcttgg cgatcgaggt ctcgaacagc gccagcgcgg
     3961 tggcgagcag gaacaccttg gtcaggaacg cgcccaggcc gatggccacg cccaccgggc
     4021 cggcacccgg ctgggccatg ccccagggcg cgaacaggca ggcgatcagc gccatgaaca
     4081 gggtcagccg caccatcccc gccagttcca tcatggcgag gtggcggccg gaatattcca
     4141 gcaccatggc ctcgtgcacc atggtcagtt ccaggtgggt ggccgggttg tcgatgggga
     4201 tgcggccatt ctcggcgatg gcgaccatca ccatggcggc cagggccaaa cccaggctga
     4261 cctcgacgcc gacattgccc gacagcacga aggcgacgat ctgggccggc tgggtggtgc
     4321 ccgccaccag cgacagcgag aaggtcacca tcagcatggc gggctcggcc agcgaggcga
     4381 tcagcatctc gcggctggcg ccgaggccgc cgaaggcggt gcccacgtcc atgccggcca
     4441 aagccgtcca gaaccgcgcc aggcccagca gcgccaccaa ggcgatcaaa tcggcggcgg
     4501 gggcgaaggc catgttggtg gtgaaggtcg gcaccacgca ggccgccaac cacacggcgg
     4561 cgaaggtgac gtagggagcg gcgcggaaca gcagcgaggc cgaatgggcc accaccgcct
     4621 ctttctgcaa cagccgccac aggtcgcgat agggctgcaa cggcgacggg ccggcgcggc
     4681 cgttgaggcg cgacttgacc aggcggacat agcccgtgac cagcggcgcc aacgccacca
     4741 ccagcacgat ctgcaccatc tgccacagga tcgccgtcat agcttctgcc tcaccgcgac
     4801 caccagcagc aggatcacca aggtcgagaa catcatcagc aggtagcggc gcaccgtcag
     4861 gtattgcatg cggttgacct gatccgcgaa ccacccgacc acccgggcca gcggcagata
     4921 caggccgtcc cacaccgggt cgatcatgtg gacgcgatgg cgggccggcg attcgtcacc
     4981 gggctcgggc atctcgaccg tctcgcgcgc tttgaagatc gtgtgggcga aggcgcggcg
     5041 catgggctgg gcgaaggaat ggccggtgta ctgggtctcg gggatgtcct cgggatggcc
     5101 gcaatcccag gcatcggccc ggcgcagggc ggtggtgccc cagcgatgga ccagcaggat
     5161 ggtgatgccg aacagcgcca accccatcag caccagcacg gtgccggaat acgaccccct
     5221 gcccggcccc accggcgaca gccacggcca gcccaaatcg gccgagaccg cgaagttgac
     5281 gccagtcagc ggctgcacca cgtcggacag cagggtggtc acggtcaccg ggatggcgcc
     5341 caggaccacg cacaagcccg ccagcgccgc catggacagg cgcatgccga aggtcacctc
     5401 gcccgcctcg cgcgccgctt cggtgcgcgg ccggccgagg aaggcgatgc cataggcgcg
     5461 cacgaagcag gtggcggcca aggcggcggc gaaggcgagg aaggcgccca ccaccggcac
     5521 gccgaacttc atggcccagt gcggcagcac cggacccttg aacagggtct ggaagatcag
     5581 ccattccgac acgaagccgt tcaacggcgg cagcgccgag atggcggcgg cgccgaccag
     5641 caccgccgtg ccggtccacg gcatccgctt cagcaacccg cccagggcgc ccagcgaacg
     5701 ctcgccggtg gcggtcatca ccgcgccggc gcccaggaac agcaggccct tcatcgccgc
     5761 gtggttgagc gcgtgcacca gcgcgccggc caggcccagc gcggccgggc cgggcagacc
     5821 ggcggaaagc gcgcagaaac cgagcccgag ccccagcgtt atgatcccca tgtt
//
LOCUS       DATIKR010000204         3979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_148539, whole genome shotgun sequence.
ACCESSION   DATIKR010000204 DATIKR010000000
VERSION     DATIKR010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148539"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            315..1247
                     /locus_tag="VLL76_03055"
     CDS             315..1247
                     /locus_tag="VLL76_03055"
                     /inference="COORDINATES: protein motif:HMM:NF014951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28502.1"
                     /translation="MVLDDVVGARAGIEPPLASPATRLGRVFFLGDPLDSLDHEWDSS
                     LRLMKASQRRGRDARWASYDDIVISGRTLILDGIAVEPDDTVWLRFDPSVSIRFYETL
                     RALCHVDARFINRPETVLTVHDKRAALSLCPRPTWSLFSAAQVAPVAAEMRDMGVETV
                     VLKPPSLFASKGVRYIPVDDADGLAEGFAALVGLFGYVIAEPYLGPGGGQPPIDLRVL
                     LTQDRVIGAIERLIPVGGGLHDVVKARPFTPEQARLVAAAKRTMRDHGIYLAGLDFLG
                     DALTELNVSCPGAIPEVNMFCDVVAEDLILDDLG"
     gene            1317..2021
                     /locus_tag="VLL76_03060"
     CDS             1317..2021
                     /locus_tag="VLL76_03060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28503.1"
                     /translation="MSLRKLFAVVAVAFSLAGCATQNFYTSDKLTRSDKGVRILMMPP
                     DVQLFELTAGGQAELNAEWTGSGRSNVKQAVIENLGTIKAKYVEFQPPAEDDPAFLKL
                     DQLQKLHGAVGATIAVHHAGPIKLPAKDGKFEWSLGPAVAELGQHADADYALFVYVRD
                     SYTSPGRAAMKAVAAILFGVYIPGGMQTGYASLVDLKTGDVVWYNRLLPREDGDLRTF
                     ERSKSTVALLLDNMPK"
     gene            2024..3199
                     /locus_tag="VLL76_03065"
     CDS             2024..3199
                     /locus_tag="VLL76_03065"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HSV28504.1"
                     /translation="MDRRTFVKGASSALALGLGGCTVHQTGSATGLTDVPPGYRPDPK
                     TDEAGFWMHADFAEEKTRTAANRIRDKAINDLVADSMCRLTRNYCGDVRTYVLRVPVF
                     NAFASPNGVVSVWSGLLLRMEDESQLAAVLGHEFAHYRRRHTLAQARDIRNKTDLAAF
                     LGMGLAAMGAGPGAQDLTQLLTMASINAFSREHEREADALGLQVMADAGYDPFACAQV
                     WKNLNAERDASGEKREYDVFVATHPDPGERIENLTKLAEARSKAGNAPNRLREAIAPI
                     RPMLLADEVNLGRFKQTLQLFDRLLKDDARPGEILFAKGELHRKRNKEADDVIALGFY
                     HEACEAKGAPADAFRQVGIMRWRRGEKGPAREYFRRYLNAAPDASDRQMIQSYLAGA"
     gene            3199..3804
                     /locus_tag="VLL76_03070"
     CDS             3199..3804
                     /locus_tag="VLL76_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28505.1"
                     /translation="MKKKILALAVALSLGGCANFTLVNPGKVDIGGKVEVEADTKWSA
                     APVEEGSTWTIDGPGLQQLIFHLGVEDGKTLFSQIDIEPRKLFGVQIEKRDAVSFKFA
                     KTMTEPELMELFSASLTKLLELPVETANLAPANLGGHPGFRFDYRMVGNDEVKRRGKV
                     VGAVVDGKLYMVNYIGTDLYHFSKGEPHADHIISTLKFKKG"
BASE COUNT          668 a         1371 c         1299 g          641 t
ORIGIN      
        1 cgcggaccgg gcagttgctt tggcgcgcgc aggtcagcag gcgggacgcg atggcgtgcc
       61 cggtggccca ttcgcccatc tccacgtgcc gtcccgcctg ggccaggcgc ggcgcgaagc
      121 aatcgggata ggggtggctg acgcttttca tgaccctttg ataccgcttt agccgcgccg
      181 ggcgcccccc gcttcttgta gccagttgcg tcgaattgtg acgattaccg cccgcttggg
      241 cggctggaaa aacttggggc gacgtggttc actgtttgct gatctacggc cgtgccaggg
      301 ggcttcaggc agcaatggtt ctcgacgacg tcgtcggcgc gcgcgccggc atcgaaccgc
      361 cgctggcgtc cccggccacc cgcctcggcc gcgtgttctt cctgggcgac ccgctggaca
      421 gcctggacca cgaatgggat tccagcctgc gcctgatgaa ggccagccag cggcgcggcc
      481 gcgacgcccg ttgggccagc tatgacgaca tcgtgatcag cggccgcacc ctgatcctgg
      541 acggaatcgc cgtcgaaccc gacgacaccg tgtggctgcg cttcgacccg tcggtgtcga
      601 tccgcttcta cgagacgctg cgggcgctgt gccacgtgga cgcccgcttc atcaaccggc
      661 ccgagacggt gctgacggtg cacgacaagc gcgccgccct gtcgctgtgc ccgcgcccga
      721 cctggagcct gttctcggcg gcgcaggtgg cgccggtggc cgccgagatg cgcgacatgg
      781 gcgtggagac ggtggtgctg aagccgccgt cgctgttcgc cagcaagggc gtgcgctata
      841 tcccggtgga cgacgccgac ggcctggccg agggcttcgc cgcgctggtc ggcctgttcg
      901 gctatgtcat cgccgagccc tatctcggcc ccggcggcgg tcagccgccc atcgacctgc
      961 gggtgctgct gacccaggac cgcgtcatcg gcgccatcga gcgcctgatc ccggtgggcg
     1021 gcggcctgca cgacgtggtc aaggcccgcc cgttcacccc cgaacaggcc cgcctggtgg
     1081 ccgccgccaa gcgcaccatg cgcgaccacg gcatctatct ggccggcctc gacttcctgg
     1141 gcgacgccct gaccgaactc aacgtcagct gccccggcgc catccccgag gtcaacatgt
     1201 tctgcgacgt ggtggcggaa gacctgatcc tcgacgattt ggggtgagcc ggcggttgct
     1261 cgtaacacgg cggtatgtat gatggcgccg ttacgatcag gggatgaggt ccagccgtgt
     1321 ctttgcgaaa gttgttcgcc gtggtcgccg tcgcgttttc gctggccggc tgcgcgacgc
     1381 agaatttcta tacctcggac aagctgaccc gctcggacaa gggcgtgcgc atcctgatga
     1441 tgccgcccga cgtccagttg ttcgagctga ccgccggcgg ccaggccgag ctgaacgccg
     1501 aatggaccgg cagcggccgc tccaacgtca aacaggcggt gatcgagaac cttggcacca
     1561 tcaaggccaa atacgtcgaa ttccagccgc cggccgagga cgatcccgcc ttcctgaagc
     1621 tggaccagtt gcagaagctg cacggcgccg tcggcgccac catcgccgtg caccacgccg
     1681 gcccgatcaa gcttcccgcc aaggacggca agttcgagtg gtcgctgggt ccggcggtgg
     1741 ccgaattggg ccagcatgcc gatgccgatt acgccctgtt cgtctatgtg cgcgacagct
     1801 acacctcgcc cggccgcgcc gccatgaagg cggtcgccgc catcctgttc ggcgtctaca
     1861 tccccggcgg catgcagacc ggctatgcct cgctggtgga cctcaagacc ggcgacgtgg
     1921 tgtggtacaa ccgcctgctg ccgcgcgagg atggcgacct gcggaccttc gagcggtcga
     1981 agtccaccgt cgccctgctg ctcgacaaca tgccgaagtg accatggacc gccgcacctt
     2041 cgtgaagggc gcgtccagcg ccctcgccct tggactgggg ggctgcaccg tccaccagac
     2101 agggtccgcc accggcctga ccgacgtgcc gccgggctat cgccccgatc ccaagaccga
     2161 cgaagccggc ttttggatgc atgccgactt cgccgaggag aaaaccagga ccgccgccaa
     2221 ccgcatccgc gacaaggcca tcaacgatct ggtggccgat tccatgtgcc ggctgacccg
     2281 caattattgc ggcgacgtcc ggacctatgt gctgcgggtt cccgtgttca acgcgttcgc
     2341 ctcgcccaac ggcgtggtca gcgtgtggtc gggactgctg ttgcggatgg aagacgaatc
     2401 ccagttggcc gccgtcctgg gccatgaatt cgcccattac cgccgccgcc acaccctggc
     2461 gcaagcccgc gacatccgca acaagacgga tttggccgca ttcctgggca tggggttggc
     2521 cgccatgggc gcaggcccgg gcgcccagga cctcacccag ttgctgacca tggccagcat
     2581 caacgccttc agccgcgagc acgagcgcga ggccgacgcg ctgggcctgc aggtgatggc
     2641 cgacgccggc tacgacccgt tcgcctgcgc ccaggtgtgg aagaacctca atgcggaacg
     2701 cgacgccagc ggtgaaaagc gcgagtacga cgttttcgtc gccacccacc ccgaccccgg
     2761 cgagcgcatc gaaaacctga ccaagcttgc cgaggcgcgc agcaaggcgg gtaacgcccc
     2821 caatcgcctg cgcgaagcca tcgcgccgat ccgccccatg ctactcgccg acgaggtcaa
     2881 cctgggccgc ttcaagcaga cgctgcaatt gttcgatcgc ctgctgaagg acgatgcgcg
     2941 ccccggcgag atcctgttcg ccaagggcga attgcaccgc aagcgcaaca aggaagccga
     3001 cgacgtcatc gcgctgggct tctaccacga ggcctgcgag gccaagggcg cgcccgccga
     3061 cgccttccgc caggtcggca tcatgcgctg gcgccggggc gagaaaggcc ccgcccgcga
     3121 gtatttccgc cgttacctca atgccgcgcc cgatgcctcg gaccggcaga tgatccagtc
     3181 ctatttggca ggtgcctgat gaagaagaag attttggccc tggccgtcgc cctgtcgctg
     3241 ggcggctgcg ccaacttcac gctggtcaat cccggcaagg tggacatcgg cggcaaggtc
     3301 gaggtcgaag ccgacaccaa gtggagtgcc gccccggtcg aggaaggctc gacctggacc
     3361 atcgacggcc ccggcttgca gcaattgatc ttccacctgg gcgtcgagga cggcaagacg
     3421 ctgttcagcc agatcgatat cgagccgcgc aaactgttcg gggtccagat cgaaaagcgc
     3481 gacgcggtgt cgttcaagtt cgccaagacc atgaccgaac ccgagctgat ggaattgttc
     3541 tcggccagcc tgaccaagct gctggaactg ccggtcgaaa ccgccaacct ggcccccgcc
     3601 aacctgggcg gccaccccgg cttccgcttc gactaccgga tggtcggcaa cgacgaggtc
     3661 aagcgccgcg gcaaggtggt gggcgccgtg gtcgacggca agctgtacat ggtcaactac
     3721 atcggcaccg acctctacca tttcagcaag ggcgaacccc atgccgacca catcatctcg
     3781 acgctgaagt tcaagaaggg gtagctcacg cgctgcggcg cgaaccccgt tcggccatca
     3841 cctggacggc gctttccacc agtcggagca cgctttccag gcggccgaag gcgaggcgtt
     3901 gttccatgtc ggtgggcttg aggcgggcgc gcaggtcgcc caggtggcgg acgaaggcgc
     3961 gggcggggag gatggtcag
//
LOCUS       DATIKR010000205         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_136390, whole genome shotgun sequence.
ACCESSION   DATIKR010000205 DATIKR010000000
VERSION     DATIKR010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136390"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..944
                     /locus_tag="VLL76_03075"
     CDS             72..944
                     /locus_tag="VLL76_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSV28506.1"
                     /translation="MIPAYKTMLVPVPDGRSAASPLDVAFRLAAEFQAHVIGLHVRVD
                     PTAAVPLMGEGMSGAMVEDMMTAAERQGADRADQAKMAFDAACDRHGVIRALHPPAEG
                     LSAEWVDIVGREEEAVAWRGRLNDLVAMARPDPGADTPSLMTLNAALMESGKPLLLTP
                     PVPKETIGTRIAIAWNGSAEAGRAVVCAMPLLKRAAHVLILSIAEDERTNNAPAGELA
                     AYLAWHGVRAECKVTSGAAANPGEALLKECEYQGIDLLVMGAYTHSRLRQLILGGVTR
                     HVIHHADIPVLMCH"
     gene            complement(1195..1584)
                     /locus_tag="VLL76_03080"
     CDS             complement(1195..1584)
                     /locus_tag="VLL76_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HSV28507.1"
                     /translation="MQPAFFNRTYDETMGLMIEARNYMAYVERRERERAGINAGLRMS
                     CEAMRVTSRLTQVMAWLMVRKAVEAGEIAPEDALAEEHRLSGGTVCTDETFLGDEALP
                     GGLRSLMDRSYRLYMRVARIEEQMLRH"
BASE COUNT          252 a          591 c          538 g          247 t
ORIGIN      
        1 ataccctgtc ggacgcggtt aacaagttcg ctcgataggc gcataatcgc cgggtcgaaa
       61 cggaggcagc catgatcccc gcctacaaga ccatgctggt cccggtgccc gacggcaggt
      121 cggccgcctc gccgctggac gtcgcgttcc gcctggccgc cgaattccag gcccacgtca
      181 tcggactgca cgtccgcgtc gatcccaccg ccgccgtgcc gctgatgggc gagggcatgt
      241 cgggcgccat ggtcgaggac atgatgaccg ccgccgagag gcagggcgcc gaccgcgccg
      301 accaggccaa gatggcgttc gacgccgcct gcgaccgcca cggcgtgatc cgcgcgctgc
      361 acccgccggc cgagggactg tcggccgagt gggtggacat cgtcggccgc gaggaagagg
      421 cggtggcctg gcgcggccgc ctcaacgatc tggtggcgat ggcgcggccc gaccccggtg
      481 ccgacacgcc gtcgctgatg accctgaacg ccgccctgat ggaaagcggc aagccgctgc
      541 tgctgacgcc gcccgtgccc aaggaaacga tcggcacccg catcgccatc gcctggaacg
      601 gcagcgccga ggccggccgc gccgtcgtct gcgccatgcc gctgctcaag cgcgccgccc
      661 atgtgctgat cctgtccatc gccgaggacg aacgcaccaa caatgccccg gccggcgagc
      721 tggccgccta tctggcgtgg cacggcgttc gcgccgaatg caaggtgacg tccggcgccg
      781 ccgccaatcc cggcgaggcg ctgctgaagg aatgcgagta ccagggcatc gacctgctgg
      841 tgatgggcgc ctacacccat tcccggctgc gccagctgat ccttggcggc gtcacccgcc
      901 acgtcatcca ccacgcggac atccctgtcc tgatgtgcca ttagggcgtg gccggccgcg
      961 acctcgtgga agctatgctg cgcgccgggg ccgcacctgc cctgcgaggt ggcgtggacg
     1021 cgggcattgg cggagttccg gacggcgctg tgattcgccc cgcacggaag cctcctctgt
     1081 gagcccgtgc ccgagcttga cggaaggttc agccgagcac ctggccccga cgcaacgacc
     1141 actttgccgc catggaccgg ctcgcgcttc gttggccggg gtgacgaaaa atggtcaatg
     1201 ccgcagcatc tgctcctcga tccgcgccac ccgcatgtac agccggtacg accggtccat
     1261 caggctgcgc aggccgccgg gcagggcttc gtcgccaagg aaggtttcgt cggtacagac
     1321 cgtgccgccc gacaggcggt gctcttcggc cagggcgtcc tcgggggcga tttcgccggc
     1381 ctcgaccgcc ttgcgcacca tcagccacgc catcacctgg gtcagccgcg aggtcacccg
     1441 catggcctcg cacgacatac gcaggccggc gttgatgccg gcacgctcgc gctcgcggcg
     1501 ctcgacatag gccatgtagt tgcgcgcctc gatcatgagg cccatggtct cgtcgtaggt
     1561 tctattgaaa aaggcgggct gcatcgtcgc gtcacctctc cacacaacct gtgcagcccc
     1621 tctctgcg
//
LOCUS       DATIKR010000206         3010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_221272, whole genome shotgun sequence.
ACCESSION   DATIKR010000206 DATIKR010000000
VERSION     DATIKR010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221272"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VLL76_03085"
     CDS             <1..891
                     /locus_tag="VLL76_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012259035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAF domain-containing protein"
                     /protein_id="HSV28508.1"
                     /translation="VYSLAYGDQPALVCEMVDWARTCGFEVACAGKGTKYRPGYHRAT
                     PDDVWTHYGLSPERAKAGGLNPRMFTSFLDGTKSAIEMAAVANATGLLPPSSGLDFPP
                     CATHDLARMLKPRADGGTLEAMGQVEVVSSAERDGRAVVGDLRWGVFVTFRPQGYYAA
                     TCFSEYGLTTDDSGSYAALWRPSHLIGLELGVSVASVGIRREPTGCPRAFNADVVAVA
                     KQDLAVGTTLDGEGGFTVWGKLLPARASLAARALPIGLAHGLTLTRPVTAGQMLTQDD
                     VALDEADDVVALRRRMERGC"
     gene            962..1849
                     /gene="speB"
                     /locus_tag="VLL76_03090"
     CDS             962..1849
                     /gene="speB"
                     /locus_tag="VLL76_03090"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018405838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HSV28509.1"
                     /translation="MGTTPTFAIPPTFLGTANRDAKARVCVAGVPFDLGTTNRPGARF
                     APAAIRAASRMLVDGDNPTGWRDPLHLGLADVGDFAIALGDIPASLKLIEQQAAAYDH
                     LVTLGGDHTITLALLRALVKRIGRPVGLVHFDAHVDTWPDNFGQTLAHGSVFWHALEE
                     GLVEPARMVQIGIRSPVQKDIHDWTKAKGVTIVTAEDVHLSTPAQVADRVRAAVGGGP
                     VYLSFDIDGLDPSQAPGTGTPEIGGLFTWQVMGILRRLGGLDWVGMDVVEVCPPHDVS
                     EITALAAATVAWQYLSLME"
     gene            2666..>3010
                     /locus_tag="VLL76_03095"
     CDS             2666..>3010
                     /locus_tag="VLL76_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HSV28510.1"
                     /translation="MSLIETRPVLAAVRRSIESRRMVPAVATVRDTVLAERPDVPMHC
                     LRPHVLAATAERFRDLFPGKVLYAVKCNPEPAVLRALWAGGIRQFDCASVQEVRLVRR
                     LFPEAELHFMHPI"
BASE COUNT          460 a         1088 c          985 g          477 t
ORIGIN      
        1 gtctattccc tggcctatgg cgaccagccg gcgctggtct gcgagatggt ggactgggcg
       61 cgcacctgcg gcttcgaggt cgcctgcgcc ggcaagggca ccaagtaccg gccgggctat
      121 caccgcgcca cccccgacga cgtgtggacc cattacggcc tgtcgcccga gcgcgccaag
      181 gccggcgggc tgaacccccg catgttcacg tcgttcctgg acggcaccaa gtcggcaatc
      241 gagatggcgg cagtcgccaa cgccaccggc ctgctgccgc cgtcgtcggg cctcgacttc
      301 ccgccctgcg ccacccacga ccttgcccgc atgctcaagc cgcgcgccga cggcggcacc
      361 ctggaagcca tgggccaggt cgaggtggtg tccagcgccg agcgcgacgg ccgcgccgtg
      421 gtcggcgacc ttcgctgggg cgtattcgtc accttccggc cgcagggcta ttacgccgcg
      481 acctgcttct cggaatacgg cctgaccacc gacgacagcg gctcctacgc cgcgctgtgg
      541 cggccgtcgc atctgatcgg gctggaactg ggcgtgtcgg tcgccagcgt cggcatccgc
      601 cgcgaaccca ccggttgccc gcgcgccttc aacgccgacg tggtcgccgt cgccaagcag
      661 gacctcgcgg tcggcaccac gctggacggc gaaggcggct tcaccgtgtg gggcaagctg
      721 ctgccggcgc gggcctcgct ggcggcgcgc gccttgccca tcggcctggc ccacggcctg
      781 accctgaccc gccccgtcac cgccggccag atgctgaccc aggacgatgt cgccctggac
      841 gaggccgacg acgtggtggc gctgcggcgc cggatggagc gcgggtgcta gcccgctttc
      901 gcgcgctgcc gaagcgcgcc cggtgactta taagaacgtg cgacacagca gagagagcag
      961 catgggcacc acgccgacct tcgccattcc gccgaccttc ctgggcaccg ccaaccgcga
     1021 tgccaaggcc cgcgtgtgcg tcgccggcgt gccgttcgac ctgggcacca ccaaccgccc
     1081 gggcgcccgc ttcgcccccg ccgcgatccg cgccgccagc cgcatgctgg tagacggcga
     1141 caaccccacc ggctggcgcg acccgctgca tctcggcctg gccgacgtcg gcgatttcgc
     1201 catcgcgctc ggcgacatcc ccgcctcgct gaagctgatc gagcagcagg cggcggcata
     1261 cgaccacctg gtcaccctgg gcggcgacca caccatcacc ctggcgctac tgcgggcatt
     1321 ggtcaaacgc atcggccgcc cggtcgggct ggtccatttc gacgcccatg tggacacctg
     1381 gcccgacaat ttcggccaga ccctggcgca tggctcggtg ttctggcacg cgctggagga
     1441 agggctggtc gagccggccc gcatggtcca gatcggcatc cgctcgccgg tgcagaagga
     1501 catccacgac tggaccaagg ccaagggcgt caccatcgtc accgccgagg acgtccacct
     1561 gtccaccccc gcccaggtgg cggaccgggt gcgggcggcg gtgggcggcg gcccggtcta
     1621 tctgtcgttc gacatcgacg gcctcgaccc cagccaggct cccggcaccg gcacgcccga
     1681 gatcggcggc ctgttcacct ggcaggtcat gggcatcctg cgccgcctgg gcgggctgga
     1741 ctgggtcggc atggacgtgg tcgaggtctg cccgccccac gacgtctcgg aaattaccgc
     1801 tttggccgcc gccaccgtgg catggcagta cctgtcgctg atggagtgat gtccggtgcc
     1861 tgatgtcatc ctgaggcgca gccgaaggat ctttcacccg atgtggcggc acgtccccat
     1921 gatggccatc cgccctccac caaccggcgg tcccatgtcc aaggcggcca accaggaaac
     1981 ctacactcgc ctgcgcgctc tccttgtcga ggctcgcaaa cggcggggca tgacgcagca
     2041 ggatttgtcc gccgcgctgg gcggttgctg gagttggacg ccagcggcgt cgtcagcagt
     2101 ctcgtttctt cagacacaga tgaacacaga taaacacaga taaaattgac aaaaccgcca
     2161 ggggattggt cggcgtcgct cattacactg atctgtgttc atctgtgttc atctgtgtcc
     2221 caaataacat agacatccga acgggacttc ccccaatgcg cccctgacgg ggtaccgctt
     2281 ttcaggtatc accaacgcgg acgcgcacta atagggggtc gttttggctt gatccccatt
     2341 agtggggcgc gtatataagc gcccagacgc taagcacgtg cccatggccc gcgaatgggt
     2401 gtcggaccgc aggtccggcc gaaggggtca agcaacgacg gacgcgtcct ttttgaggag
     2461 ccggtcatgg gtgggccggt acccgaaagg gaggtggaca tggtcgtgac ccgcgggaaa
     2521 ccgatctcca gccgattccg cagtatgtga cggcggccgt cgcggcaaac cagccgcaat
     2581 gacgccgccg agcattcgcc taccgcccgc gccggcggcc gcaaggtcgc gcgcgccgtc
     2641 tgtcgtctgc tgggggaccc ctcacatgag cctgatcgaa acccgtcccg ttctcgccgc
     2701 cgtgcgccgc tcgatcgagt cgcgccgaat ggtgccggct gtcgcgacgg tgcgcgacac
     2761 ggtgctggcc gagcgccccg acgtgcccat gcattgcctg cggccgcacg tcctggccgc
     2821 caccgccgag cgcttccgcg acctgttccc cggcaaggtg ctgtacgccg tcaagtgcaa
     2881 ccccgagccg gcggtgctgc gcgcgctgtg ggccggcggc atccgccagt tcgactgcgc
     2941 ctcggtgcag gaggtgcggc tggtgcgccg cctgttcccc gaggccgagc tgcatttcat
     3001 gcatcccatc
//
LOCUS       DATIKR010000207         2711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_88079, whole genome shotgun sequence.
ACCESSION   DATIKR010000207 DATIKR010000000
VERSION     DATIKR010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88079"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1397
                     /locus_tag="VLL76_03100"
                     /pseudo
     CDS             330..1397
                     /locus_tag="VLL76_03100"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(1471..>2711)
                     /locus_tag="VLL76_03105"
     CDS             complement(1471..>2711)
                     /locus_tag="VLL76_03105"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28511.1"
                     /translation="PDAGLVISPPLLGRLSNQWVIVMARRITAPDGGGFAGIAYAALP
                     VRSISGLFAGVDLGPGDAIALRGPLPALGVIARYPETVGGAPAIGNPSVSPQLQMMAG
                     SHPDKGTYLAQASIDGIERVLSYHKVGHYPYIVVVGQSTANLKAESWGESLKVIALTA
                     AFLLMTTVGSVFAYRALRLRRLLEMRLTRKNDELARFAEILAHHMKEPVRQQHIFTQH
                     LARLLPKPLSADVQQSIDAVVEGAKRHLTLLRDAQRYLDLNTLDVTVTRTPGDAALDE
                     ALARLDTRIAERNATIERSPLPDLPVPAEPLAELFETLIENAILYGRPGIPPCVTITA
                     TCSEREAAIAITDNGLGIPPEFRDRVFRAFERLDTGPHHHGTGIGLALAKKIVESVGG
                     SIWLEAPDTGGTRVCISFPR"
BASE COUNT          442 a          891 c          925 g          453 t
ORIGIN      
        1 gggtgttccg cctcagggac ctgcgcggcc gcgccttcgc cgagcgcacc gaccggttgg
       61 cggcgctggg aacccgctac cgtttcctga cctacctgac cgagcacacg cccaatttcg
      121 gcctgcaatt cttcaccctg gcggtgatcg gcggcggcgg ctatctggtg acgcgcgacg
      181 ccctgtcggt gggcgccctg gtggcgttca acggcgtctt cctcaacatg agcctgtggt
      241 tcgctgaact cagctacatc gcccccagcg tcatccacgc ttccggcggg ctgcagcgca
      301 tcggcgagat gctggacgag ccggccgaca tggtcgatcg gcccgacacc gcaccgccgc
      361 cggcgcttgg tggcgacatc cgcttcgaca acgtcacctt cgcctattcc ggcgggcagc
      421 ccaatctcgc cgaggtcagc tacgaggttc cggcgggcgc ccgggtggcg ttcgtcggcc
      481 ccagcggctc cggcaaaagc accaacctca acctgatcat gcggttctac gaccccgacc
      541 aggggcgcgt gctgctgggt gggatggacc tgcggtcatt gccgcgcgaa ctcgtgtacc
      601 gccagatggg aacggtgttc caggaaagtt tcctgttcaa caccacgatc cgcgagaaca
      661 tccgcatggg cagccccggc gccagcgacg aggccgtgga ggcggcggcc aaggcggccg
      721 agttgcacga catcgtcatg caattgcccg agggctacga cacctgcgtc ggcgaacgcg
      781 gcgaccgctt gtcgggcggt cagcggcagc gcgtggccat cgcccgcgcg ctgatcggca
      841 acccctcgat cctgatcctc gacgaggcga cgtcggcgct ggaccccgcc acggaacagg
      901 cggtcaacgc gacgctggaa cgaatctcgg ccggcaagac ggtgctatcc gtgacccacc
      961 gcctgccgtc ggtggcaggc tacgaccgga tactggtgtt cgaccgtggc cggttggtcg
     1021 agggcgggac gcacgaaacc ttgctggcgc gggatgggct ttacgccaac ctgtggcgcc
     1081 ggcaggtggg gctcagcgtg tcttccgacg gacgcgacgc ctcggtcacc gccgaaagcc
     1141 tgcgggaatt cccgctgttc gccgacatgg aactggacga tctggcgcgg atcgccggcg
     1201 aattcgtcac cgagcacgcg gtggccggcc gagatctcat cgtccagggc gagatgggca
     1261 gcaagttctt catcatcgtt cggggccggg tcagcgtgct gatcgaccag tccgaagtcg
     1321 ccaccctcgc caccggcgat tatttcggcg agatggcgct gctggcggac accgtcaccg
     1381 ccgcaacggt gcgcactgcc agcgacagca tcttcctggt cctgcctaaa tccagcttcc
     1441 agcgcctgct gcaaagatcg tcctgcccgt tcagcgagga aatgagatgc agacccttgt
     1501 gccgccagtg tcgggcgctt ccagccagat gctgccgcca accgattcga cgatcttctt
     1561 ggcgagggcc aagccgatgc cggttccatg gtggtgcggc ccggtgtcca ggcgttcgaa
     1621 cgcgcggaac acgcggtcgc ggaactccgg ggggatcccc aggccgttgt cggtgatcgc
     1681 gatggccgct tcccgctcgg aacaggtggc ggtgatcgtc acgcagggcg ggatgccggg
     1741 ccgaccgtaa aggatggcgt tctcgatcag ggtttcaaac agctcggcga gcggctcggc
     1801 cgggaccggc aggtcaggca gagggcttcg ttcgatggtg gcattgcgct cggcgatgcg
     1861 cgtgtccaag cgtgcgagag cctcgtcgag ggcggcgtca cctggtgtcc gggttaccgt
     1921 gacgtccaat gtgttgaggt cgagatagcg ctgggcgtcc cgtaacaggg tcagatgccg
     1981 cttcgcgccc tcgacgacgg cgtcgatgga ttgctggacg tcggcggaca gcggcttggg
     2041 cagcagacgg gccagatgct gggtgaagat gtgctgctgg cgaaccggtt ccttcatgtg
     2101 gtgggcgagt atctcggcga agcgcgccaa ctcgtcgttc ttccgcgtca gccgcatctc
     2161 cagcagcctg cggagccgga gggcgcgata ggcgaaaacg cttccgacag tggtcatcag
     2221 caggaaggcg gccgtcaggg cgatgacctt caggctttcg ccccacgatt ccgccttcag
     2281 attggcggtc gattgcccga cgacgacgat atacggatag tgcccgacct tgtggtacga
     2341 cagcacccgt tcgatcccgt cgatgctggc ctgggccaga taggtcccct tgtctgggtg
     2401 gctccccgcc atcatctgca actgcggcga taccgaggga ttgccgatgg cgggtgcccc
     2461 tccgaccgtt tcaggatagc gggcgatcac ccccaaggca ggcaacggac cgcgcagcgc
     2521 gatggcgtcg ccggggccga gatcgacccc ggcgaacaga ccggaaatcg accggaccgg
     2581 cagcgccgca taggcgatgc ccgcaaagcc gccgccgtcg ggggcggtga tccgccgggc
     2641 catgacgatc acccattgat tgctcaggcg cccgagcagc ggcggcgaga tcaccaggcc
     2701 ggcatcgggc t
//
LOCUS       DATIKR010000208         2517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_64126, whole genome shotgun sequence.
ACCESSION   DATIKR010000208 DATIKR010000000
VERSION     DATIKR010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64126"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1223
                     /locus_tag="VLL76_03110"
     CDS             <1..1223
                     /locus_tag="VLL76_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSV28512.1"
                     /translation="SPKSMMLRTHCQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQS
                     LHTNALDEAIALPTPFSARIARNTQLIIQEETGIPHVVDPLAGSYYVESLTNAIAEEA
                     WKLIQEVEELGGMTKAVESGMPKMKIEEAAARRQARIDRGEEVVVGVNKYQPAEEAPI
                     EILDVDNAKVREAQIARLKQIKATRDQAKVDAALAALTKAGESGEGNLLELAVVATRA
                     RATVGEISDALEKAFTRHRAVNRTISGVYGGVYQGDEAFAKLKADIDAFAAEEGRRPR
                     MLVVKMGQDGHDRGAKVIATAFADIGFDVDVGPLFQTPEEAARQAVENDVHIVAASSL
                     AAGHKTLVPALIAELKQQGAGDILVVTGGVIPQQDYDFLYKAGVAAVYGPGTNIPKAA
                     GEILELLKKARKAA"
     gene            complement(1263..1484)
                     /locus_tag="VLL76_03115"
     CDS             complement(1263..1484)
                     /locus_tag="VLL76_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin"
                     /protein_id="HSV28513.1"
                     /translation="MSAEHHVYKIVQLAGSSPDGIEDAIRVAVERAGQTIHNLRWFEV
                     VETRGHIDGGKVAHWQVVLKVGFTLEEAD"
     gene            complement(1538..2032)
                     /locus_tag="VLL76_03120"
     CDS             complement(1538..2032)
                     /locus_tag="VLL76_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3TM-type holin"
                     /protein_id="HSV28514.1"
                     /translation="MIPAILASVGLPLLVKAVEGALSGLDHPAAKAASGALKQVGAAI
                     GAKEIPPEQVAEAHRHLERMTELDSAEARAAIEQINGTMRVEAASEDWYVRRWRPTFG
                     YSVAATWVATMGAVSWAIVAEPTQAPTIIAALVNTSPIWGIALGVLGISVVKRSQDKA
                     RLAG"
     gene            complement(2038..2508)
                     /locus_tag="VLL76_03125"
     CDS             complement(2038..2508)
                     /locus_tag="VLL76_03125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HSV28515.1"
                     /translation="MVLVETEADRESTQPPPIPGSAIDILARTLWGEARGETVKGKEA
                     IAAVVMNRVRRARERNGAYWWGASVEQVCLKPWQFSCWNATDPNRAKLEAVTMDNRVF
                     RTCVRIARRAVGGVLADPTNGATHYHVRDMSPPWSRGREPSAEIGAHLFYNDVE"
BASE COUNT          410 a          886 c          847 g          374 t
ORIGIN      
        1 agagcccgaa gtccatgatg ttgcgtaccc actgccagac ctccggctgg tccctgaccg
       61 agcaggaccc ctacaacaac gtcgtgcgca ccaccatcga agccatggct gccgtgttcg
      121 gcggcaccca gtcgctgcac accaatgcgt tggacgaggc catcgcgctg ccgaccccgt
      181 tctcggcccg catcgcccgc aacacccagc tgatcatcca ggaagagacc ggcatcccgc
      241 atgtggtcga tccgctggcc ggctcgtact acgtcgaaag cttgaccaac gccatcgccg
      301 aggaagcctg gaagctgatc caggaagtcg aggaactggg cggcatgacc aaggccgtcg
      361 aatccggcat gcccaagatg aagatcgagg aggccgccgc ccgccgccag gcccgcatcg
      421 atcgcggcga ggaagtggtc gtcggcgtca acaagtacca gcccgccgaa gaggcgccga
      481 tcgagatcct ggacgtggac aacgccaagg tccgcgaggc gcagatcgcg cgcctcaagc
      541 agatcaaggc gacccgcgat caggccaagg tggacgccgc cctggccgcg ctgaccaagg
      601 ccggcgagtc cggcgagggc aatctgctgg aactggcggt ggtcgccacc cgcgcccgcg
      661 ccaccgtcgg cgaaatctcc gacgcgctgg aaaaggcctt cacccgccac cgcgccgtca
      721 accgcaccat ctcgggcgtc tatggcggcg tctaccaggg tgacgaggcc ttcgccaagc
      781 tgaaggccga catcgacgcc ttcgccgccg aggaaggccg ccgtccgcgc atgctggtgg
      841 tcaagatggg ccaggacggc cacgaccgtg gcgccaaggt gatcgccacc gccttcgccg
      901 acatcggctt cgacgtcgat gtcgggccgc tgttccagac cccggaagag gccgcccgcc
      961 aggccgtcga gaacgacgtc cacatcgtcg ccgcctcgtc gctggccgcc ggccacaaga
     1021 ccctggtgcc cgccctgatc gccgagctga agcagcaggg cgccggcgac atcctggtcg
     1081 tcaccggcgg cgtcatcccg cagcaggatt acgacttcct gtacaaggcg ggcgtcgcgg
     1141 ccgtctacgg ccccggcacc aacatcccga aggccgccgg cgagatcctc gaactgctca
     1201 agaaggcccg caaggcggcg taactgcctc gggttcggat cggccccgcg accgtcgcgg
     1261 ggtcagtccg cctcctccaa ggtgaagcct actttcagca ccacctgcca gtgggcgacc
     1321 ttgccgccgt cgatatggcc gcgcgtttcc accacttcga accaacgaag attgtggatg
     1381 gtctggccgg cgcgctctac ggcgacccgg atggcgtcct cgatgccgtc gggcgacgac
     1441 ccggccagct gcacgatctt gtatacatgg tgctcggcgc tcatggcggc ctcccttggt
     1501 tgcccaacca gggatatggg cggccgcatc ggcgcgttca ccccgccagc cgcgccttgt
     1561 cctggctgcg cttgaccacc gagatgccca gcacgcccaa ggcgatgccc cagatggggc
     1621 tggtgttgac cagggcggcg atgatggtgg gggcctgggt gggttcggcg acgatggccc
     1681 acgacaccgc gcccatggtg gcgacccagg tggccgccac cgaatagccg aaggtcgggc
     1741 gccagcgccg cacgtaccag tcttccgacg ccgcctcgac ccgcatggtg ccgttgatct
     1801 gttcgatggc ggcgcgcgcc tcggcggaat ccagttcggt catgcgttcg aggtggcgat
     1861 gggcctcggc cacctgctcg ggcgggattt ccttggcgcc gatggcggcg ccgacctgct
     1921 tgagggctcc ggacgccgcc ttggcggcgg ggtggtcgag gcccgacagg gcgccctcga
     1981 cggccttgac cagcagcggc aggccgaccg aggcgagaat ggcggggatc atggtcctta
     2041 ctccacgtcg ttgtagaaca ggtgggcgcc aatttcggcc gacggctcgc ggccgcgcga
     2101 ccacggcggc gacatgtcgc gcacatggta atgggtggcg ccgttggtgg ggtcggccag
     2161 cacgccgccc accgcgcgcc gggcaatgcg gacgcaggtg cggaacaccc ggttgtccat
     2221 ggtcaccgcc tcaagcttgg cacggttggg atcggtggcg ttccagcacg agaactgcca
     2281 cggcttcagg cagacctgtt cgacgctggc gccccaccaa taggcgccgt tgcgctcgcg
     2341 ggcgcggcgc acccggttca tcaccacggc ggcgatggct tccttgccct tgaccgtttc
     2401 gccgcgcgcc tcgccccaca gggtgcgggc caggatgtcg atggcactgc cggggatggg
     2461 cggcggctgg gtggattcgc ggtcggcttc cgtctcgacc agcacgatgg gcgccct
//
LOCUS       DATIKR010000209         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_233102, whole genome shotgun sequence.
ACCESSION   DATIKR010000209 DATIKR010000000
VERSION     DATIKR010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233102"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VLL76_03130"
     CDS             <1..398
                     /locus_tag="VLL76_03130"
                     /inference="COORDINATES: protein motif:HMM:NF024030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3775 domain-containing protein"
                     /protein_id="HSV28516.1"
                     /translation="EHGDQAMLRIPVDKVWVVIRMAREALGREPAEPPDHLDGDPLPS
                     SEQYDEARFDAVFDYVDSLNGDELADLLALSWLGQADGSGDGWEMLRAAADDEVSDGD
                     GVAEIVQDPTLPDDLEAGLESLGYELPDG"
     gene            complement(377..796)
                     /locus_tag="VLL76_03135"
     CDS             complement(377..796)
                     /locus_tag="VLL76_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28517.1"
                     /translation="MTRAGRRRAKLLLSTACLAWMAAAGWFLFTDLPYDAVQHHKSDA
                     VKEKMRECEGSFQQRYDCKEAIVIETGRKTFWNMTERMLMVFVPAMLLGAVGGWVIRR
                     IPDDRPAAPPPDPDWKSRAQQHIAHPVMDDHHPSGNS"
     gene            complement(850..1824)
                     /locus_tag="VLL76_03140"
     CDS             complement(850..1824)
                     /locus_tag="VLL76_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HSV28518.1"
                     /translation="MTKAIRIHQTGGPEVMRWEEVDLPDPGPGQALVRQTAIGVNFID
                     VYHRTGLYPAPLPATLGMEGAGVVEAVGEGVVEIAVGDRVAYAAGPIGAYAERRLIPA
                     HRLVALPEGVEERQAAAIMLKGMTAQYLLRRTYPVRPGDTILVQAAAGGVGLLLCQWA
                     KHLGATVIGTVGSEDKAALAKAHGCDHAIVYTTEDFVVRTRALTDGRGVDVVYDSVGA
                     QTFMGSLDCLRPLGMLVAFGQSSGKVPPFDAGLLGQKGSLFLTRPSLFDYTAARQDLV
                     STAMELFDMVKRGFIKVEINHTYALADAAQAHRDLENRKTTGSSLLLP"
     gene            complement(1835..>2095)
                     /locus_tag="VLL76_03145"
     CDS             complement(1835..>2095)
                     /locus_tag="VLL76_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HSV28519.1"
                     /translation="PMGTPFQMKVWAALAAIPYGKTRTYGDLALEFGTAPRALGGACG
                     RNPLPILVPCHRVLATNRTLGGYSGMDGVETKEFLLRLEHAL"
BASE COUNT          346 a          677 c          739 g          333 t
ORIGIN      
        1 cggagcatgg agatcaagcc atgctccgca ttccggtcga caaggtctgg gtggtcatcc
       61 ggatggcgcg cgaggccctg ggacgggagc ccgccgagcc gccggaccac ctcgacggcg
      121 acccgctgcc atcctccgaa caatatgacg aagcgcggtt cgacgcggtg ttcgactatg
      181 tcgattcgct gaacggcgac gaactggccg atctgctggc gctgtcctgg ctgggacagg
      241 ccgacggcag cggtgacggc tgggagatgt tgcgggcggc ggccgacgac gaggtgtcgg
      301 acggcgacgg cgtcgccgag atcgtccagg accctacctt gcccgacgat ctggaagccg
      361 gccttgaaag cctgggctac gaattgcccg acgggtgatg gtcgtccatg accggatggg
      421 cgatgtgttg ctgggcgcgc gacttccagt cgggatcggg cggcggcgcg gccgggcggt
      481 cgtcgggaat gcggcggatg acccaaccgc ccacggcccc cagcagcatg gccggcacga
      541 acaccatcag catgcgttcg gtcatgttcc agaaggtctt gcggccggtt tcgatgacga
      601 tggcttcctt gcagtcatag cgctgctgga agctgccctc gcactcgcgc atcttctcct
      661 tcaccgcgtc cgacttgtgg tgctggaccg cgtcataggg aaggtcggtg aacagaaacc
      721 accccgccgc cgccatccag gcgagacagg cggtgctcag caataatttg gcgcgtcgtc
      781 ggccggccct ggtcataacc ccggtcactc ccactcacat gggctcctta gggttatagc
      841 gcacagcaat cagggaagca gcagcgatga tccggtggtc ttgcggtttt ccaggtcgcg
      901 gtgggcctgg gcggcatcgg ccagcgcata ggtgtggttg atttccacct tgatgaagcc
      961 gcgcttgacc atgtcgaaca attccatcgc ggtggacacc aggtcctggc gggcggcggt
     1021 gtaatcgaac agcgacggcc gcgtcaggaa cagcgagcct ttctgcccca gcaggccggc
     1081 gtcgaacggc ggcaccttgc ccgagctttg gccgaacgcc accagcatgc ccagcggccg
     1141 caggcagtcg agcgagccca tgaaggtctg ggcgccgacc gaatcgtaga ccacgtcgac
     1201 gccgcggccg tcggtcaggg cgcgggtgcg gacgacgaaa tcctcggtgg tgtagacgat
     1261 ggcatggtcg cagccatgcg ccttggccag cgccgccttg tcctcggacc cgacggtgcc
     1321 gatcacggtg gcgcccagat gcttggccca ttggcacagc agcagaccga caccgccggc
     1381 ggccgcctgg accaggatgg tgtcgccggg gcggaccgga taggtgcggc gcagcaggta
     1441 ttgtgccgtc atgcccttga gcatgatggc ggccgcctgg cgctcctcga cgccctcggg
     1501 cagagcgacc agccggtggg cggggatcag ccggcgctcg gcataggcgc cgatgggccc
     1561 ggcggcatag gcgacgcggt cgccgaccgc aatctcgacc acgccttcgc ccaccgcctc
     1621 gaccacgccg gcgccctcca tgcccagggt ggcgggcagg ggggccgggt acaggccggt
     1681 gcggtgatag acgtcgatga agttcacgcc gatggcggtc tggcgcacca gcgcctggcc
     1741 ggggccggga tcgggaagat cgacctcttc ccagcgcatg acctcgggtc cgccggtctg
     1801 atggatgcgg atggccttgg tcataatcag cctcctacag cgcgtgttcc agcctgagca
     1861 ggaattcctt ggtctcgacg ccgtccatgc cggaatagcc gcccagcgtg cggttggtag
     1921 ccagcacgcg gtggcagggc accaggatcg gcaggggatt gcggccgcag gcaccgccca
     1981 gggcacgcgg cgccgtgccg aactcaagcg ccagatcgcc ataggtgcgg gtcttgccat
     2041 agggaatggc ggcaagggcg gcccacacct tcatctggaa cggcgtgccc atggg
//
LOCUS       DATIKR010000210         1852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_15156, whole genome shotgun sequence.
ACCESSION   DATIKR010000210 DATIKR010000000
VERSION     DATIKR010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15156"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VLL76_03150"
     CDS             <1..199
                     /locus_tag="VLL76_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="siroheme synthase"
                     /protein_id="HSV28520.1"
                     /translation="VENGTTPRQRRVLGTLATLPQLVADAGLKPPSLIIVGKVVSLAE
                     SLDWFCRSHDTAAIEAAGAGA"
     gene            196..957
                     /locus_tag="VLL76_03155"
     CDS             196..957
                     /locus_tag="VLL76_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HSV28521.1"
                     /translation="MSDAGEVAVVLVGHGSARHPDSAQPIHALAAALTERHGWPAAAV
                     FMKQAPLLDQALDLVNARRVVVVPVFAGKGYYTDQLIPKAMGLTGAVTERDGRTIHYT
                     APAGTHPRIPGLMACRAAGVAMADGLALKDCSLLVIAHGSARPGGSGETPRAIAESIR
                     AMDAFGEVVLAFLEQEPFATNWRDLVKGRELVVLPLLVAQGMHASQDIPPLFGLEAGQ
                     TGPVAIDGRRARLASGLGAEPDLVDIVAELVRGAL"
     gene            1032..>1852
                     /locus_tag="VLL76_03160"
     CDS             1032..>1852
                     /locus_tag="VLL76_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018152096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HSV28522.1"
                     /translation="MAQSGAGLPGLTLAAIGVVYGDIGTSPLYTLREAFGPAGGLHLS
                     EGTVLGVLSLIVWALVIVVSIKYVAVILRADNRGEGGVLALSTLARRRLGQGGRLSRA
                     TVVLAVVGAALFYGDGVITPAISVLSAVEGLHMVTPVFDRLVVPLAVAILVGLFVVQR
                     VGTGRVGRLFGPIICLWFAVLGVLGALSIVETPSVLRALSPLHALAFFADHGWQSFVA
                     LGAVVLAVTGSEALYADMGHFGRTPIRIAWFGLVLPGLVLNYFGQGALLLRQPEA"
BASE COUNT          218 a          651 c          668 g          315 t
ORIGIN      
        1 ggtggaaaac ggcaccacgc cgcgccagcg ccgggtgctg ggcacgctgg ccacgctgcc
       61 gcaactggtc gccgatgccg gcctcaagcc gccgtcgctg atcatcgtcg gcaaggtggt
      121 gtccttggcc gaaagtctgg actggttctg ccgctcccac gacaccgccg cgatcgaggc
      181 cgccggggcc ggcgcatgag cgacgcgggc gaggtcgcgg tcgtcctggt cggccacggt
      241 tccgcccgtc accccgacag cgcgcagccc atccacgccc ttgccgccgc cctgaccgaa
      301 cgccacggct ggccggctgc ggcggtgttc atgaagcagg cgccgctgct ggaccaggcg
      361 ctggacttgg tgaacgcccg ccgggtggtg gtggtgccgg tgttcgccgg caagggctat
      421 tacaccgacc aactgatccc caaggccatg ggcctgaccg gcgccgtcac cgaacgcgac
      481 ggccgcacca tccattacac cgcccccgcc ggcacccatc cccgcattcc cggcctgatg
      541 gcctgccgcg ccgccggtgt cgccatggcc gacgggctgg cgctcaagga ttgttcgctc
      601 ttggtgatcg cgcatggttc ggcccggccc ggcggctcgg gcgagacgcc gcgcgccatc
      661 gccgaatcca tccgcgccat ggatgccttc ggcgaggtgg tgctggcctt cctggaacag
      721 gaacccttcg ccaccaattg gcgcgatctg gtcaagggca gggaattggt ggtgctgccg
      781 ctgctggtag cccagggcat gcacgccagt caggacatcc cgccgctgtt cggcctcgag
      841 gcgggacaga ccggccccgt cgccatcgac ggccgccgcg cccgcctggc ctcgggcctg
      901 ggagccgaac cggacttggt ggacatcgtg gcggaactgg tgcgcggggc gctttaagcc
      961 gcaacggcct taggaacatc ccccgcgccc gcgctgttgg tctctgaccg aggccaagcg
     1021 ggaggacgtc catggcccaa tccggggccg gcctgcccgg cctgaccctg gccgccatcg
     1081 gggtggtcta cggcgacatc ggcacatccc cgctttacac cctgcgcgag gcgttcggcc
     1141 cggccggcgg cctgcacctg tccgagggca cggtgctggg ggtgctgtcg ctgatcgtct
     1201 gggcgctggt gatcgtcgtc tcgatcaaat acgtcgccgt catcctgcgt gccgacaatc
     1261 gcggcgaggg tggcgtgctg gcgctgtcca ccctggcgcg gcggcggctg ggacaggggg
     1321 gccggctcag tcgcgccacc gtggtgctgg cggtggtggg ggcggcgctg ttctacggcg
     1381 acggcgtcat caccccggcc atctcggtgc tgtcggcggt cgagggactg cacatggtga
     1441 cgccggtgtt cgaccgcctg gtggtgccgc tggcggtcgc catcctggtg gggctgttcg
     1501 tcgtccagcg cgtcggcacc ggccgggtcg ggcggctgtt cggccccatc atctgtctgt
     1561 ggttcgccgt gctgggcgtg ctgggcgcgc tgtccatcgt cgagacgccg tcggtgttgc
     1621 gggcgctgtc gccgctgcac gcgctggcgt tcttcgccga ccacggctgg caatccttcg
     1681 tcgcactggg cgcggtggtg ctggcggtga ccggatccga ggcattgtat gccgacatgg
     1741 gccatttcgg ccgcacccct atccgcatcg cgtggttcgg gctggtgctg ccgggcctgg
     1801 tgctgaacta tttcggccag ggcgccctgc tgctgcgcca gcccgaggcg tt
//
LOCUS       DATIKR010000211         2732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_160407, whole genome shotgun sequence.
ACCESSION   DATIKR010000211 DATIKR010000000
VERSION     DATIKR010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160407"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VLL76_03165"
     CDS             complement(<1..627)
                     /locus_tag="VLL76_03165"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV28523.1"
                     /translation="MTKPFICLTAGGTGGHVFPAEALASALLARGHRLALVTDRRGHA
                     YGGTLGQLETFRVAAGGIAGRGILPKLRGVAELALGVIQARSLLARLRPDAVVGFGGY
                     ASVPTMVAASLLGIPTAIHEQNAVLGRANRLLAGRVKRIATSYAQVEHLDEALKAKVV
                     HTGMPVRAAIAALRDTAYPAMDGTLRLLVLGGSQGARILSEVVPAALAR"
     gene            complement(624..1748)
                     /gene="ftsW"
                     /locus_tag="VLL76_03170"
     CDS             complement(624..1748)
                     /gene="ftsW"
                     /locus_tag="VLL76_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HSV28524.1"
                     /translation="MTFGRTDTSVLGRWWWTVDRWTIAALLLLVATGVLLTMAASPAV
                     AERIGADSFHFVRRQFVFLVPALVVMIGVSLLSPRQIRRVATLGFLGAVLLLVAVLFL
                     GPEVKGSTRWLNIAGISIQPSEFIKPTFAVVAAWMFAEARLNPGFPGKAIACALYGLV
                     AMLLLLQPDVGQTLIISAIWGAQFFLAGLPMVLVVGLGILGVVGGVGAYFTFSHVQSR
                     IDRFLDPSSGDAYQVTTALSAFKNGGIFGRGPGEGRVKLVLPDAHTDFILAVAGEEFG
                     VLLCLVVLALFAFIVLRGLSRVMKEENLFVVLATAGLLVQFGLQAMVNMASTLRLMPT
                     KGMTLPFISYGGSSMLALALGMGMVLALTRKRYGTEGLDE"
     gene            complement(1745..>2732)
                     /gene="murD"
                     /locus_tag="VLL76_03175"
     CDS             complement(1745..>2732)
                     /gene="murD"
                     /locus_tag="VLL76_03175"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HSV28525.1"
                     /translation="LDMPDLGADGRYVLELSSYQLELVEALRLEAGVLLNITSDHLGR
                     HGGLDGYVAAKRRLFDRLGKTGTAVIGMDDEHCRAMAEELKALGKNVVTISAEHYDVD
                     VAAPDGLLRDEGRIICDLRDIARLPGRHNWQNACAVYAMARADGVAADVIAQAFASYP
                     GLAHRQELVATKAGVAYVNDSKATNADAAEKALVCYDSVYWIAGGQAKEGGIASLAPH
                     FARIKHAFLIGEAADAFAATLEGKVANTRCGTLDVAIAKAHAMAEPGSVVLLSPACAS
                     WDQFKSFEHRGDVFRNLVAVILSEAKDLSGTDAFGVKDPSPAAQGDKSGRRA"
BASE COUNT          473 a          913 c          982 g          364 t
ORIGIN      
        1 gcgggccagg gcggcgggca ccacctcgga caggatgcgg gcgccctggc tgccgcccag
       61 caccaacaga cgcaacgtgc cgtccatggc cggataggcg gtgtcgcgca gggcggcgat
      121 ggcggcgcgc accggcatgc cggtatggac gaccttggcc ttcagcgcct cgtccagatg
      181 ctcgacctgg gcgtagctgg tggcaatgcg cttgacccgg ccggccagca gccggttggc
      241 gcggcccagc acggcgttct gttcgtgaat ggcggtggga atgcccagca gcgacgccgc
      301 caccatggtg ggaaccgacg catagccgcc gaagcccacc accgcgtcgg ggcgaaggcg
      361 ggccagcagc gaccgcgcct ggatcacccc cagggccagt tcggccacgc cgcgcagctt
      421 gggcaggatg ccccgcccgg cgatgccgcc ggcggcgacg cggaaggtct ccaactggcc
      481 cagggtgccg ccataggcgt ggccgcgacg gtcggtcacc agcgccaggc ggtgtccgcg
      541 cgccagcagg gccgaggcca gcgcctcggc ggggaagacg tggccgccgg tgccgccggc
      601 ggtgaggcag atgaagggct tggtcattcg tccaggccct ccgtgccata gcgcttgcgg
      661 gtcagcgcca gcaccatgcc catgcccagc gccaaagcca gcatggacga accgccatag
      721 ctgatgaacg gcagggtcat gcccttggtc ggcatcaggc gcagggtcga ggccatgttg
      781 accatggcct gcagcccgaa ctgcaccagc aggccggcgg tggccagcac cacgaacaaa
      841 ttctcttcct tcatcacccg cgacaggccg cgcagcacga tgaaggcgaa cagcgccagc
      901 accaccaggc acagcaggac gccgaattcc tctccggcga cggccaggat gaagtcggta
      961 tgggcgtcgg gcagcaccag cttgacccgg ccctcgccgg ggccgcgccc gaagatgccg
     1021 ccgtttttga aggccgacag cgccgtggtg acctgatagg cgtcgcccga gctggggtcg
     1081 aggaagcggt cgatgcggct ttgcacgtgg ctgaaggtga aataggcgcc gacgccgccg
     1141 accacgccca ggatgcccag gccgaccacc agcaccatgg gcaggccggc caggaagaac
     1201 tgggcgcccc agatggccga gatgatcagg gtctggccga cgtcgggctg cagcaacagc
     1261 agcatggcga ccaggccgta aagggcgcag gcgatggcct tgccggggaa gccggggttg
     1321 aggcgggctt ccgcgaacat ccaggcggcg accacggcga aggtgggctt gatgaattcc
     1381 gacggctgga tcgagatgcc cgcgatgttg agccaccgcg tcgaaccctt gacctcgggg
     1441 ccgaggaaca gcacggcgac cagcagcagc accgcgccca aaaagcccag ggtggcaacg
     1501 cggcggatct ggcgcggcga cagcagcgac acgccgatca tcaccaccag ggccgggacc
     1561 aggaacacga actggcggcg cacgaagtgg aaggaatctg cgccgatgcg ctcggccacc
     1621 gccgggctgg cggccatggt cagcagcacg ccggtggcga ccagcagcag cagcgccgcg
     1681 atggtccagc ggtcgacggt ccaccaccag cggcccagga cggaggtgtc ggtgcggccg
     1741 aacgtcatgc gcgcctcccg ctcttgtcac cctgagccgc aggcgaaggg tctttcaccc
     1801 cgaaggcatc cgtgcctgaa agatccttcg cttcgctcag gatgacagcg acgagattgc
     1861 ggaagacgtc gccgcgatgc tcgaagctct tgaactggtc ccacgaggcg caggccggcg
     1921 acagcagcac caccgagccc ggctcggcca tggcatgcgc cttggcgatc gcgacgtcca
     1981 gcgtgccgca tcgggtgttg gcgaccttgc cctccagcgt ggcggcaaag gcgtcggcgg
     2041 cctcgccgat caggaaggcg tgcttgatgc gggcaaaatg gggagccagg ctggcgatgc
     2101 cgccttcctt ggcctggccg ccggcgatcc aatagacgct gtcgtagcag accagcgcct
     2161 tttcggcggc atcggcgttg gtggccttgg aatcgttgac gtaggcgacg ccggccttgg
     2221 tggcgaccag ttcctggcgg tgggccaagc cgggatagct ggcgaaggcc tgggcgatga
     2281 cgtcggcggc aacgccgtcg gcgcgggcca tggcatagac ggcgcaggcg ttctgccagt
     2341 tgtggcggcc gggcaggcgg gcgatgtcgc gcaggtcgca aatgatgcgg ccctcgtcgc
     2401 gcagcaggcc gtcgggggcg gcgacgtcca cgtcgtaatg ctcggccgag atggtgacga
     2461 cgttcttgcc cagcgccttc agttcctcgg ccatggcgcg gcaatgctcg tcgtccatgc
     2521 cgatcacggc ggtgccggtc ttgcccaggc ggtcgaacag ccggcgcttg gcggcgacat
     2581 agccgtccag cccgccatgg cggcccagat ggtcggaggt gatgttgagc agcacgccgg
     2641 cctccaggcg tagcgcctcg accagttcca actgatagga cgacagctcc agcacatagc
     2701 ggccgtcggc gcccaaatcg ggcatgtcca gt
//
LOCUS       DATIKR010000212         4581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_136634, whole genome shotgun sequence.
ACCESSION   DATIKR010000212 DATIKR010000000
VERSION     DATIKR010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4581
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136634"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1201
                     /locus_tag="VLL76_03180"
     CDS             <1..1201
                     /locus_tag="VLL76_03180"
                     /inference="COORDINATES: protein motif:HMM:NF040606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV28526.1"
                     /translation="GYLAEFNGDFLAFVKASTSKTKWGLARTDAFGMIFNRVSAIDMK
                     FPPNNQPPDAPVSYPHLWTSWRFDAVQWNAAVPNGSTLKNLGRNVGEVLGVFGKAELK
                     RPTVFHPYYTSTVRTKNLLAMENQLWSLQAPKWPELMFGVPNSDQVKAGQQVYEKNCQ
                     GCHQQVPGGSGIINVVRIPLKEIGTDPVMATNALSKRWSVQLTGTAMPPLFGTKLKQE
                     DLGVSLLANAVVGSLIGSVVAPDADQGLPKLWKKKTGGAWKATASGNYEDTEVTDETA
                     SDEQVTTMHADLKAYQEEVQAKQASADDLLVYKARPLDGIWATGPFLHNGSVPSLYAL
                     LNSKARPAKFKVGTQAFDPTVVGFKDEGAFEYDTTQPGNGNGGHTYGDSLSDKQRWDL
                     IEYLKTL"
     gene            1491..1694
                     /locus_tag="VLL76_03185"
     CDS             1491..1694
                     /locus_tag="VLL76_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014101843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSV28527.1"
                     /translation="MAVGIVKWFNATKGYGFIQPEGGGNDVFVHVTAVQRAGLDKLDE
                     GQRVRYELVRDRGRVAAGNLQAD"
     gene            1758..2456
                     /locus_tag="VLL76_03190"
     CDS             1758..2456
                     /locus_tag="VLL76_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008383142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HSV28528.1"
                     /translation="MRTCVAIRHVGFEDLDGLAPVLAGRGFTHRYVEAPLGLDGLDVL
                     SPDLVVVLGGPIGANDDRDFPFLAHEVELIRRRLDADRPILGICLGAQLMARALGARV
                     YPNPAGKEIGWSSLALTPEGEASVLLDLAGAPVLHWHGDTFDLPHGALPLAETPATPN
                     QAFSWGMRALALQFHLEVTRAGLERWYVGHVGELSAQGLSVPELRADGLTHGALIESR
                     GQSAFGRWIDEVCS"
     gene            2521..3636
                     /locus_tag="VLL76_03195"
     CDS             2521..3636
                     /locus_tag="VLL76_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HSV28529.1"
                     /translation="MDQKLREEDVARLLANPSGDARAEIADKIAGQHAHLSVSERKLA
                     EDIFRLMVKDAEVRVRQALSHQLKESPLVPHDVAVALARDVDAVALPILKFSEVLTDE
                     DLIEIVRSQSPDKQVAVASRSHVSANLADALVDSHNETVVATLVSNEGAEIAENTLQR
                     VVDEFAGSEAVGEKLVERRSLPVTVAERLMAKVSDNLRDKLMARSDLSPEAAGGLLIQ
                     AREMAVLGLADTGADVAKLIDHLHRNGRLTPSIILRAVCMGDTTFFETALAKLARIKL
                     ENARTLIHDAGKRGFEALFEKAGLPKVFFRAMRAAIDVSYEMEYDGLPHDRERFSRRM
                     IERILTQYGDLGVEFENDDLEYLLAKMSQLPSNMRND"
     gene            3671..>4581
                     /locus_tag="VLL76_03200"
     CDS             3671..>4581
                     /locus_tag="VLL76_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28530.1"
                     /translation="MSDKAAAAKPIDPEAALRKEIVKTIKGPAVERLTKVIPALAAFE
                     DTYGTVMASPDLLYACLQLLRNKRELFQDLLVDEAGNPVTNDDIPLRCGRSVNQIVGM
                     VVRSGAKAYAEKRFGASPTVKQVVRPETKSFIDRIAALVGKKWETERPKEPASAAKQF
                     YAAIKDNLDYDWQVPLIPQFAELPIKLIKDLGRGVTTLHNPEGLAALADIGRHNMEQA
                     RRILSDEMMREMLDTQPLAAKGIAFLGKDRYDFLHGAVYEKMGEHFWEMCVDVERLEA
                     METQNAKDLEQMAAHLHIISGLTIEEV"
BASE COUNT          828 a         1515 c         1508 g          730 t
ORIGIN      
        1 gggctacctg gccgagttca acggcgactt cctggccttc gtcaaggcca gcacctcgaa
       61 gaccaagtgg ggcctggccc gcaccgacgc gttcggcatg atcttcaacc gcgtgtcggc
      121 catcgacatg aagttcccgc cgaacaacca gccgccggac gcgcccgtca gctatccgca
      181 tctgtggacc tcgtggcggt tcgacgccgt gcagtggaac gccgccgtgc ccaacggctc
      241 gaccctgaag aacctgggcc gcaacgtggg cgaggtgctg ggcgtgttcg gcaaggccga
      301 actcaagcgc ccgaccgtgt tccatccgta ttacaccagc accgtgcgca ccaagaacct
      361 gctggccatg gaaaaccagt tgtggtcgct gcaggcgccg aaatggcccg agctgatgtt
      421 cggcgtgccc aattccgatc aggtgaaggc cggccagcag gtctacgaga agaactgcca
      481 gggctgccac cagcaggttc cgggcggcag cggcatcatc aacgtcgtcc gcatcccgct
      541 caaggagatc ggcaccgacc cggtgatggc gaccaatgcc ctgtccaagc gctggtcggt
      601 gcaactgacc ggcaccgcca tgccgccgct gttcggcacc aagctgaagc aggaagacct
      661 gggcgtgtcg ctgctcgcca acgccgtggt cggctcgctg atcggctcgg tggtggcgcc
      721 ggacgccgac cagggcctgc ccaagctgtg gaagaagaag accggcggcg cctggaaggc
      781 caccgcctcg ggcaattacg aggacaccga agtcaccgac gagaccgcgt cggacgagca
      841 ggtgaccacc atgcatgccg acctcaaggc ctatcaggag gaggtccagg ccaagcaggc
      901 gtcggccgac gacctgctgg tctacaaggc ccgtccgctc gacggcatct gggccaccgg
      961 tccgttcctg cacaacggct cggtgccctc gctgtacgcc ctgctgaact cgaaggcccg
     1021 gccggccaaa ttcaaggtcg gcacccaggc cttcgatccg accgtggtcg gtttcaagga
     1081 cgagggcgcg ttcgagtacg acaccaccca gcccggcaac ggcaacggcg gccataccta
     1141 tggcgatagc ctgagcgaca agcagcgctg ggacctgatc gagtacctca agaccctgta
     1201 agggtcgtgc cgccagccac ccccagggac cccctggggg tggcttttta ttgcctgccc
     1261 caccacccga tctaaaccct acccatcccg agtgggaggg cgccgccgcc tctcccccgt
     1321 tccgcttcgg ctgttcgact gaagggcagg ggcgcttgat acgcccatgg gcaggggcca
     1381 cgtctgccca cgcaatccct ggttcggcgg gtccaactgc gtccatgcga ttgacgaagc
     1441 cccgcggggt gcggggtggg cgatgttcta cactggccta ggagatacgc atggcggtcg
     1501 ggatcgtgaa gtggttcaat gcgaccaaag gttacggctt catccagccc gagggcggcg
     1561 gcaacgacgt tttcgtgcat gtcaccgccg tgcagcgtgc cggactggac aagttggacg
     1621 aaggtcagcg ggtgcgttac gagctggtcc gcgaccgcgg cagggtggcg gccggcaacc
     1681 ttcaggcgga ttgaccgcct ggggcggacg acttgcggcg gccccttcgg gggccgtctt
     1741 catttgtggg aggggcaatg aggacctgtg tcgccatccg ccacgtcggt ttcgaggatc
     1801 tcgacggact ggccccggtg ctggcggggc gtggtttcac ccatcgctat gtcgaggcgc
     1861 cgcttgggct ggacggcctc gacgtgttgt cgcccgacct ggtggtggtg ctgggcggcc
     1921 ccatcggcgc caatgacgac cgcgacttcc ccttcctggc ccacgaggtg gagctgatcc
     1981 gccgccggct cgacgccgac cggcccatcc tggggatctg cctgggcgcc cagttgatgg
     2041 cacgcgcctt gggcgcccgc gtctatccca atcccgccgg caaggagatc ggctggtcgt
     2101 cgctggcgct gacgcccgag ggcgaggcct cggtgctgct cgacctggcg ggcgcgccgg
     2161 tgctgcattg gcacggcgac accttcgacc tgccgcacgg cgccctgcct ctggccgaga
     2221 ccccggccac gcccaaccag gcgttctcgt gggggatgcg ggcgctggcg ctgcaattcc
     2281 acctcgaggt cacgcgcgcc ggcctggaac gctggtatgt cggccatgtc ggcgaattgt
     2341 cggcccaagg attgtcggtc cccgaattgc gcgcggacgg cctgacccat ggcgcattga
     2401 tcgagtctcg cgggcaaagc gcgttcggtc gctggataga cgaagtttgc tcgtgaaggg
     2461 tgcggggaac ggttgtatag tgtcgcccca tcgacagggc cgaagcggaa gaagttcgac
     2521 gtggaccaga agctgagaga ggaagacgtc gcgcgcctgc ttgccaatcc ttcgggtgac
     2581 gcgcgggcgg agatcgcgga caagattgcc ggtcagcatg ctcatctgag cgtcagcgaa
     2641 cggaaactgg ccgaagacat ctttcgcctg atggtcaagg acgccgaagt gcgcgtccgc
     2701 caggcgctgt cgcaccagct caaggaaagc ccgctggtgc cccacgacgt cgccgtggcc
     2761 ttggcccgcg acgtcgatgc ggtggcgctg ccgatcctca agttctccga ggtcctgacc
     2821 gacgaagacc tgatcgagat cgtgcgcagc caaagccccg acaagcaggt ggcggtggcg
     2881 tcccgctcgc acgtctcggc gaacctggcc gacgccttgg tcgacagcca caacgagacc
     2941 gtggtcgcca ccctggtgtc caacgaaggc gccgagatcg ccgagaacac gctgcagcgc
     3001 gtggtcgatg aattcgccgg ctccgaggcg gtgggcgaaa agctggtcga gcgccgctcg
     3061 ctgccggtca ccgtggccga gcgcctgatg gccaaggtgt cggacaacct gcgcgacaag
     3121 ctgatggcgc ggtccgattt gtcgcccgaa gcggccggcg gcctgttgat ccaggcgcgc
     3181 gagatggcgg ttctgggcct cgccgacacc ggggccgacg tcgccaagtt gatcgaccac
     3241 ctgcaccgca acggccgcct cacgccctcg atcatcctgc gcgccgtctg catgggcgac
     3301 accaccttct tcgagacggc gctggccaaa ctggcccgca tcaagctcga gaacgcccgc
     3361 accctgatcc acgacgccgg caagcgcggc ttcgaagccc tgttcgagaa ggcgggcctg
     3421 cccaaggtgt tcttccgcgc catgcgcgcc gccatcgacg tgtcgtatga aatggagtac
     3481 gacggcctgc cccatgaccg tgagcgcttc tctcgccgca tgatcgagcg tatcctgacg
     3541 cagtacggcg acctgggtgt cgagttcgaa aacgacgacc tcgaatacct gctggcgaag
     3601 atgagccagt tgccgtccaa catgcgcaac gactagccgg atatcggctg ttcaggggat
     3661 tagggaaggt atgtcggata aggccgctgc ggcgaagccc atcgacccgg aagccgcgct
     3721 ccggaaggaa atcgtcaaga ccatcaaggg cccggccgtc gagcggctga ccaaggtgat
     3781 ccccgccctg gcggcgttcg aggacaccta cggcaccgtc atggccagcc ccgacctgct
     3841 gtacgcctgc ctgcaattgc tgcgcaacaa gcgcgagctg ttccaggacc tgttggtgga
     3901 cgaggccggc aatccggtga ccaacgacga catccccctg cggtgcggcc gcagcgtcaa
     3961 ccagatcgtc ggcatggtgg tgcgttcggg cgccaaggcc tatgccgaga agcggttcgg
     4021 cgccagcccc accgtcaagc aggtggtgcg ccccgaaacc aagagcttca tcgaccgcat
     4081 cgccgccctg gtcggcaaga agtgggaaac cgagcggccc aaggaaccgg catccgccgc
     4141 caagcaattc tatgccgcca tcaaggacaa cctggattac gactggcagg tgccgctgat
     4201 cccgcaattc gcggaattgc cgatcaagct gatcaaggat ctgggcaggg gcgtcaccac
     4261 gctgcacaac cccgagggac tggccgcttt ggccgacatc ggccgccaca acatggaaca
     4321 ggcccgccgc atcctgtccg acgagatgat gcgcgagatg ctggacaccc agccgttggc
     4381 tgccaagggc atcgccttcc tgggcaagga ccgctacgac ttcctgcacg gtgccgtcta
     4441 cgagaagatg ggcgagcatt tctgggaaat gtgcgtcgat gtcgagcgcc tggaggcgat
     4501 ggagacgcag aacgccaagg acctggagca gatggcggcc catctgcaca tcatttcagg
     4561 cctcaccatc gaagaagtca t
//
LOCUS       DATIKR010000213         3147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_124345, whole genome shotgun sequence.
ACCESSION   DATIKR010000213 DATIKR010000000
VERSION     DATIKR010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124345"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1248)
                     /gene="topA"
                     /locus_tag="VLL76_03205"
     CDS             complement(<1..1248)
                     /gene="topA"
                     /locus_tag="VLL76_03205"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HSV28531.1"
                     /translation="MKVVVVESPAKAKTINKYLGSDFQVIASYGHIRDLPPKDGSVRP
                     DDGFSMDWESDPKSEKHVKEIAQAVKKADKLFLATDPDREGEAISWHVKKVLEDRGAL
                     KGVDVKRVVFNEITKTAVTEAMRNPRDIHQELVDAYLARRALDYLVGFTLSPVLWRKL
                     PGSRSAGRVQSVALRLICERESEIETFKAREYWTLAADFLTAKGAMITAGLTHLDGVK
                     LDKFDIADQAKAMAAKAKIEAASFTVASVERKKAKRNPFAPFTTSTLQQEASRKLYLP
                     AARTMQLAQRLYEGIELGGETVGLITYMRTDGVTMAAEAVAACRDLIGRDYGKTYLPD
                     APRLYKTKAKNAQEAHECIRPTDLFRRPEQVARYLDKDQLRLYELIWKRTVASQMASA
                     ELDQVAVDVASADRQVVMRATGSV"
     gene            complement(1286..2413)
                     /gene="dprA"
                     /locus_tag="VLL76_03210"
     CDS             complement(1286..2413)
                     /gene="dprA"
                     /locus_tag="VLL76_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HSV28532.1"
                     /translation="MDEKTHPLSASQRLDWLRLIRSENVGPRTFFRLLERYGTAAAAL
                     AALPELAKRGGRTRPITVCTKGVAERELEAAEQVGAIPLAAIEPNYPRWLAATDDAPP
                     ILYVRGNPSLLTRSMVAMVGARNASVNGRNLARRIAADLGRAGLVVASGLARGIDTAA
                     HEGSLASGTVAVLAGGVDVVYPPENQRLYEDIAASGAVLSEMPPGTQPQASHFPRRNR
                     IVSGLSLGVVVIEATPKSGSLITARLAADQGREVFAVPGSPLDPRAQGPNGLIKSGAV
                     LTEGADDILRVLSDLLRRPLAEGKRSEFEARTVPIPSDEELASARRTVLSCLGPTPVT
                     VDLLIRECQLSPPVVSMVLLELELAGRLERHPGHQVSLLLG"
     gene            2526..2921
                     /locus_tag="VLL76_03215"
     CDS             2526..2921
                     /locus_tag="VLL76_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV28533.1"
                     /translation="MSKGFGVPERRIFPKGSVIFREGERGDEAYLVQQGSVRIFKTVT
                     GKRITIGQVKPFQIFGEMALMDDAPRMAAAEANEDTACLVLSKATIREMLDMAPPGLT
                     NVLQSLIATMRVMGDDLASARAQVMELGG"
BASE COUNT          519 a         1033 c         1073 g          522 t
ORIGIN      
        1 caccgagcca gtggcgcgca tcaccacctg gcggtcggcg ctggcgacgt cgacggccac
       61 ctggtcgagc tcggccgagg ccatctggct ggcgacggtg cgcttccaga tcagttcgta
      121 gagacgaagc tggtccttgt cgaggtaacg cgccacctgc tccggccggc ggaacaaatc
      181 ggtgggacgg atgcactcgt gcgcttcctg ggcgttcttc gccttggtct tgtagaggcg
      241 cggcgcgtcg ggcagatagg tcttgccgta gtcgcggccg atcaggtcgc ggcaagcggc
      301 gaccgcctcg gccgccatgg tgacgccgtc ggttcgcatg taggtgatca gaccgaccgt
      361 ctcgccgccc agttcgatgc cttcgtacag gcgctgggcc aattgcatgg tgcgggcggc
      421 gggcaggtac agcttgcggc tggcctcctg ctgcagggtc gaggtggtga agggcgcgaa
      481 cggattgcgc ttcgccttct tgcgctcgac cgacgcgacc gtgaagctgg cggcctcgat
      541 cttggccttg gcggccatgg ccttggcctg atcggcgatg tcgaacttgt cgagcttgac
      601 gccgtcgaga tgggtcaggc cggcggtgat catggcgccc ttggcggtca ggaaatcggc
      661 agccagggtc cagtattcac gcgccttgaa ggtctcgatc tcggactcgc gctcgcagat
      721 caggcgcagc gccaccgatt ggacgcggcc tgccgagcgc gagccgggca gcttgcgcca
      781 cagcaccggc gacagggtga agccgaccag atagtcgagg gcgcggcggg ccagataggc
      841 gtccaccagc tcttggtgga tgtcgcgcgg attgcgcatg gcctcggtca cggcggtctt
      901 ggtgatctcg ttgaacacca cgcgcttgac gtcgacgccc ttcagcgcgc cgcgatcttc
      961 cagcaccttc ttgacgtgcc aggaaatggc ctctccctcg cgatccgggt cggtcgccag
     1021 gaacagtttg tcggccttct tgaccgcctg ggcgatttcc ttgacgtgct tctcggactt
     1081 gggatcgctc tcccaatcca tcgagaagcc gtcatccggc cgaaccgaac cgtccttggg
     1141 cggcaggtcg cggatgtgcc cgtacgaggc aatcacctgg aagtcagacc ccaggtattt
     1201 gttgatagtc tttgccttgg cgggcgactc gacgacgacg accttcatcc ggacccgatc
     1261 tgacaggaag aaaaaacggg cgccgtcagc ccagcaacag cgaaacctga tgcccgggat
     1321 ggcgctccag gcgtccggcc agctcgagtt cgagcagaac catggacacc accgggggag
     1381 acaattggca ctcacggatc agcaagtcaa ccgtcacagg tgtcgggccc aaacacgaca
     1441 gcaccgtacg gcgcgccgaa gccagctctt cgtcgctggg aatcgggacc gtgcgggcct
     1501 cgaattcgct gcgtttgcct tcggcaagcg gacggcgcaa caggtcggac agcaccctga
     1561 ggatgtcgtc ggcgccctcg gtcagcacgg caccgctctt gatcaacccg ttcggcccct
     1621 gggcgcgcgg atcgagcggc gagccgggca cggcgaacac ctcgcgcccc tggtcggcgg
     1681 ccagccgggc ggtgatcagc gagccggact tgggcgtcgc ctcgatcacc accacgccaa
     1741 gcgacaggcc cgagacgatg cggttgcggc ggggaaagtg gctggcctgg ggctgggtgc
     1801 cgggcggcat ctcggacagc acggcaccgg atgcggcgat gtcctcgtac aggcgctggt
     1861 tctcgggcgg gtagaccacg tcgacgccgc cggccagcac cgccaccgtg cccgaggcca
     1921 gcgagccttc gtgcgcagcc gtgtcgatgc cgcgcgccag ccctgacgcc accaccagac
     1981 cggcgcgtcc cagatcggcg gcgatgcggc gcgccagatt gcggccgttg accgaggcgt
     2041 tgcgggcgcc gaccatggcc accatcgacc gggtcagcag cgacgggttg ccgcgcacat
     2101 aaaggatcgg cggcgcgtcg tcggttgccg ccagccagcg cgggtaatta ggctcgatgg
     2161 ccgccaacgg gatggcgccg acctgttcgg ccgcttccag ctcgcgttcg gcgacaccct
     2221 tggtgcacac ggtgatcggc cgcgtccgcc cgccgcgctt ggccaattcg ggcagcgccg
     2281 ccaaggcggc ggcggcggtg ccgtatcgct ccagcagccg gaagaaggtg cgcggcccga
     2341 cattctcgct gcggatcagg cgcagccagt caagacgctg ggatgccgac aagggatggg
     2401 tcttttcgtc cattgcgcga gcctgcgcga ttgcatacac gccgtcaagg gctccgtttt
     2461 tcccccgatg cacaaagggc gcgggcggta tatgcttgtg cggatcaatg ctcaaggggg
     2521 tgtacatgag caaaggcttt ggggtgcccg agcggcgtat tttcccgaaa ggcagcgtca
     2581 tcttccgcga gggcgaacgc ggcgacgagg cctatctggt gcagcagggc agcgtacgca
     2641 tcttcaagac cgtcaccggc aagcgcatca ccatcggcca ggtcaagccg ttccagatct
     2701 tcggcgagat ggccctgatg gacgacgccc cgcgcatggc ggcggccgag gccaacgagg
     2761 acaccgcctg cctggtgctg tccaaggcca ccatccgcga aatgctggac atggcgccgc
     2821 ccggcctgac caacgtgctg caatccctga tcgccaccat gcgcgtcatg ggcgacgacc
     2881 tcgcctcggc gcgggcacag gtgatggaac tggggggctg atccccccta tccgtccgca
     2941 cagttgattg acgggcacta aattaggtaa ggcatataca cactttaccg gagcccgcat
     3001 gcgccgcttc atccgccgca acccgcccaa cgattgccgc ctgtgcgtcc tcaaggccgc
     3061 catcggcggg ctggtgacgg tcgccctggt cgtcctgatg gccgagatgg cgggcaacat
     3121 gctggcggtg gcgccgatgg cggccag
//
LOCUS       DATIKR010000214         4672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_112243, whole genome shotgun sequence.
ACCESSION   DATIKR010000214 DATIKR010000000
VERSION     DATIKR010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4672
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112243"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1789)
                     /locus_tag="VLL76_03220"
     CDS             complement(170..1789)
                     /locus_tag="VLL76_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HSV28534.1"
                     /translation="MIRFENISKQNSHRILFLDASAALNRGEKIGLVGPNGAGKTTLF
                     RMITGEELPDNGQVSIEKQVSIGYFNQDVGEMSGRSAVAEVMDGAGPVSTVAAELAEL
                     EAAMCDPDRDDMDAVVERYGEVQARFEELGGYELEGRAREVLAGLSFSQEMMDGDVGK
                     LSGGWKMRVALGRILLMRPDAMLLDEPSNHLDIESLIWLEEFLKGYEGALLMTSHDRE
                     FMNRIVNKIIEIDCGSLNTYAGDYEFYERQRALNEKQQQAQFERQQAMLAKELKFIER
                     FKARASHAAQVQSRVKKLDKIERFEPPKRRQVVAFDFPSPPRSGEDVAVLKNVRKGYG
                     SRTIYDGFDLTIRRKERWCVMGVNGAGKSTLLKLVAGATDPDSGTVTVGASVKMGYFS
                     QHAMDVLDGSATIFETLEGAFPTANQGTLRTLAGCFGFSGDDIEKKCRVLSGGEKARL
                     VMAIMLFNPPNFLVLDEPTNHLDLDTKEMLIKALAAYEGTMLFVSHDRHFLAALSNRV
                     LELTPDGMHQYTGGYTEYVARTGHEAPGLRS"
     gene            1941..2204
                     /locus_tag="VLL76_03225"
     CDS             1941..2204
                     /locus_tag="VLL76_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28535.1"
                     /translation="MPIQAHIVAEVRPYRLIEDDYGRCAVVEARCGHVYCLHCDHPRH
                     CAPDTPAGMVEVVGDHGWTDQDHAAALFRELVDREERYSQIIW"
     gene            complement(2194..2469)
                     /locus_tag="VLL76_03230"
     CDS             complement(2194..2469)
                     /locus_tag="VLL76_03230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28536.1"
                     /translation="MRICHVCGQSWLDHSQDCRVRSDLERMRRVLDRLREEGREQELQ
                     FRMGRYLDLFGNLSCQGKAEMPTHEDCNRCGHKDICVILPPAAQPTR"
     gene            complement(2531..3583)
                     /locus_tag="VLL76_03235"
     CDS             complement(2531..3583)
                     /locus_tag="VLL76_03235"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HSV28537.1"
                     /translation="MKTKAYGAHAADRKLEPMDIVRRRPGPHDVEIAIAYCGVCHSDL
                     HQVRSEWQGTLYPCVPGHEIVGHVTAVGAAVTRFKPGDTIGVGCLVDSCRHCASCAEG
                     LEQYCENGFTLTYNSPGPDEPGHTLGGYSQRIVVDDKFVLRIRHPEDQLAAVAPLLCA
                     GITTYSPLRHWGAGPGKKVGIVGIGGLGHMGIKLAHAMGAHTAAFTTSESKRGDALKL
                     GADEVVISKDADDMARHAGSFDFILDTVGASHDLDAYTALLKRDGTLCLVGAPEHPHP
                     APNVFTLIFGRKAIAGSLIGGIAETQEMLDFCADKGIVADIEMIPAQMIDEAYDRMVR
                     SDVKYRFVIDIASLGS"
     gene            complement(3580..4308)
                     /locus_tag="VLL76_03240"
     CDS             complement(3580..4308)
                     /locus_tag="VLL76_03240"
                     /inference="COORDINATES: protein motif:HMM:NF014635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HSV28538.1"
                     /translation="MAPLTEEEMIADRLVAALGLTRPPVALAWAEIAPEGAALVDRAF
                     TSACAFWVEAETRTIFATAEDHANCPVGAMVMGLPLAPEVQARLGELVVGMAGCGYLA
                     ASEAGAIPVRENVAPGVVYGPLAGFPVEPEIVLAWLVPAQAMLWAEAAGAVEWGGEAT
                     RQFTGRPACAAIPSALAADRPVLSFGCIGMRTFTGLPDDSLLGVIPGHHLTAFVHRLE
                     ETADANRQMAAFYHQARAALGVEI"
     gene            complement(4296..>4672)
                     /locus_tag="VLL76_03245"
     CDS             complement(4296..>4672)
                     /locus_tag="VLL76_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014629794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV28539.1"
                     /translation="SLILVAVLIFFAVYTGVRDVDTRLVERVKTLGGGPGILVREVYV
                     PSVTVWVLGNLKVAVGFAFTGAVVGEFVASTEGLGYLLQFAQSTYNAALTLTLTLLIM
                     AFVLVLFALAGQAEKRLLSWRR"
BASE COUNT          768 a         1539 c         1556 g          809 t
ORIGIN      
        1 ggcgtcatcc cgggcttgac ccgggatcca gagccgcgtt gcccaggatg acaatggaat
       61 cgtgttcatc tgtgtcgccc gccttggcgg gcgtccgcgt tcatccgtgt ctattggccg
      121 accaaattta accggacagc agtgcgaagg atcgcgggga tgacgaagct caactccgca
      181 ggccgggcgc ctcgtgcccc gtgcgcgcca cgtattcggt gtagccgccg gtatattggt
      241 gcattccgtc gggcgtcagt tccagcaccc ggttggacag cgccgcaagg aagtggcggt
      301 cgtgcgatac gaacagcatg gtgccttcat aggccgccag ggccttgatc agcatttcct
      361 tggtgtcgag gtcgaggtgg ttggtcggtt cgtccagcac caggaagttg ggcgggttga
      421 acagcatgat agccatcacc aggcgggcct tttcgccgcc cgacaggacg cggcacttct
      481 tttcgatgtc gtcgccggaa aagccgaagc agccggccag agtgcgcagc gttccctggt
      541 tggccgtcgg gaacgcgcct tccagcgtct cgaagatggt ggccgagccg tccagcacgt
      601 ccatggcgtg ctgcgagaaa tagcccatct tgacgctggc gccgaccgtg acggtgccgc
      661 tgtccggatc ggtcgcgccg gccaccagct tcaacagggt cgacttgccg gcgccgttga
      721 cgcccatgac gcaccagcgc tctttgcggc ggatggtaag gtcgaagccg tcatagatgg
      781 tgcggctgcc atagcccttg cgcacgttct tgagcaccgc cacgtcctcg cccgagcgcg
      841 gcggcgaggg gaagtcgaag gccacgacct ggcggcgctt gggcggctcg aagcgttcga
      901 tcttgtccag cttcttgacc cggctttgca cctgggcggc atgcgaggcg cgggccttga
      961 agcgctcgat gaacttcagc tccttggcca gcatggcctg ctgacgctcg aactgcgcct
     1021 gctgctgctt ctcgttcagc gcccgctggc gctcgtagaa ttcgtagtcg ccggcatagg
     1081 tgttgagcga tccgcaatcg atctcgatga tcttgttgac gatgcggttc atgaactcgc
     1141 ggtcgtgcga ggtcatcagc agggcgccct cgtagccctt caggaattcc tcgagccaga
     1201 tcaggctttc gatgtccagg tggttgctgg gttcgtccag cagcatggcg tcgggccgca
     1261 tcagcaggat gcggccgagc gccacgcgca tcttccagcc gcccgacagc ttgccgacgt
     1321 cgccatccat catttcctgg ctgaagctga ggccggccag cacttcgcgc gcgcggccct
     1381 ccagctcgta gccgcccagt tcctcgaagc gggcctggac ctcgccatag cgctcgacga
     1441 cggcgtccat gtcgtcgcgg tcggggtcgc acatggcggc ttccagctcg gccagttcgg
     1501 cggcgacggt gctgaccggc ccggcgccgt ccatcacttc cgccaccgcg ctgcggccgg
     1561 acatctcgcc gacatcctgg ttgaaatagc cgatcgagac ctgcttctcg atggacacct
     1621 ggccgttgtc gggcagctcc tcgccggtga tcatccgaaa cagcgtcgtt ttgccggcac
     1681 cgttgggtcc gaccagaccg atcttttcac cccggttgag cgccgccgac gcgtcgagga
     1741 agagaatgcg gtggctgttc tgtttgctga tgttctcgaa gcggatcatg tgcggctggg
     1801 ttcccgtggc gaaagtcgcc ccttatgcca caggatgccc ggcgcgacag agaagtaact
     1861 ttcgggcggt cggcccacga tgccgcgcgg ccggcggatt gttcctttgc atcggggaat
     1921 gctctgacca cgtcccgtct atgccgatac aagctcatat cgttgcggag gtccgcccct
     1981 atcgcctgat cgaggacgac tatggccgct gcgccgtcgt ggaggcgcgg tgcggccacg
     2041 tctattgcct ccattgcgac catccccgcc actgcgcccc cgacaccccg gcgggcatgg
     2101 tggaagtggt gggcgaccac ggatggaccg accaggacca tgccgccgcg ctgtttcgcg
     2161 agctggtcga ccgcgaggag cgttacagcc agatcatctg gtaggctgcg ccgccggcgg
     2221 caagatgacg caaatgtcct tgtggccgca gcggttgcag tcctcatgcg tcggcatctc
     2281 ggccttgccc tggcacgaca ggttgccgaa caggtcgagg taacggccca tgcggaattg
     2341 cagctcctgc tcacgcccct cctcgcgcag gcggtcgagc acgcggcgca tgcgttccag
     2401 gtcggacctg acccggcaat cctgtgaatg gtccagccag ctttgcccgc acacgtgaca
     2461 gatccgcatt cgcccattcc tccagaaagc ggcggaccat agcccaggca ttaggtgcag
     2521 atcaaatcca tcatgaaccc agcgacgcga tgtcgatgac gaagcggtat ttgacgtcgc
     2581 ttctgaccat gcggtcatag gcctcgtcga tcatctgggc cgggatcatc tcgatgtcgg
     2641 cgacgatgcc cttgtcggca cagaaatcca gcatctcctg ggtttcggcg atgccgccga
     2701 tcagcgagcc ggcgatggcc ttgcggccga agatcagggt gaagacgttg ggcgccgggt
     2761 ggggatgctc gggcgccccc accaggcaca gggtgccgtc gcgcttcaac aaggcggtgt
     2821 aggcatccag gtcgtggctg gcgccgacgg tgtcgaggat gaagtcaaag ctgccggcat
     2881 gccgggccat gtcgtccgcg tccttcgaga tgacgacttc gtccgccccc agcttcagag
     2941 cgtccccgcg cttgctttcc gaggtggtga aggccgccgt gtgggcgccc atggcgtgag
     3001 ccagcttgat gcccatatgg ccgagcccgc cgatgccgac gatgcccacc ttcttgcccg
     3061 ggccggcgcc ccagtgccgc agcggcgaat aggtggtgat gccagcgcac agcagcggcg
     3121 ccacggcggc gagttggtcc tcgggatgcc tgatcctgag aacgaacttg tcatcgacga
     3181 cgatgcgctg ggaatagccg cccagggtat ggccgggttc atccgggccg ggcgagttgt
     3241 aggtcagcgt gaagccgttc tcgcagtatt gctcgagccc ctcggcgcac gaggcgcaat
     3301 gccggcagct gtccaccagg cagccaaccc cgatcgtgtc gccgggcttg aagcgggtga
     3361 cggccgcccc gacggcggtc acgtggccga cgatctcgtg gccgggcacg cagggataca
     3421 gagtgccctg ccattccgag cggacctgat gcaggtcgga atggcagacg ccgcaatagg
     3481 cgatggcgat ctcgacatcg tgggggccgg gcctgcgccg cacgatgtcc atgggttcca
     3541 gtttcctgtc ggcggcatgg gcgccatagg ccttggtttt catatttcga ctcccagcgc
     3601 ggctcgtgcc tgatggtaga acgccgccat ctggcggttg gcgtcggccg tttcctccag
     3661 ccggtggacg aaggccgtca ggtggtggcc ggggatgacg cccagcaggc tgtcgtcggg
     3721 caggccggtg aaggtgcgca tgccgatgca gccgaacgac agcaccggcc ggtcggccgc
     3781 caaggcggag gggatggcgg cgcaggccgg gcggccggtg aactgccgcg ttgcctcgcc
     3841 gccccactcg accgcgccgg cggcctcggc ccacagcatg gcctgggccg gcaccagcca
     3901 ggccagcacg atttcgggtt cgacgggaaa gcctgccagc gggccataga cgacgccggg
     3961 cgcaacgttt tcgcgcaccg ggatggcgcc ggcctcgctg gccgccagat aaccgcagcc
     4021 ggccatgccc accaccaact cacccagccg cgcctgcacc tcgggcgcca gcggcaggcc
     4081 catcaccatg gcgcccaccg ggcagttggc gtggtcctcg gcggtggcga agatggtgcg
     4141 ggtctcggcc tcgacccaga aggcgcaggc cgaagtgaag gcccgatcca ccagggcggc
     4201 gccttccggc gcaatctcgg cccaggccag ggccaccggc ggacgggtca ggccaagggc
     4261 ggcgacaagg cggtcggcga tcatctcttc ctccgtcagc ggcgccacga cagcaggcgc
     4321 ttttcggcct ggccggccag ggcgaacagc accaggacga aagccattat cagcaaggtc
     4381 aacgtcaggg tgagggcggc attgtaggta gattgggcga attggagcag gtagccgagg
     4441 ccctcggtcg aggccacgaa ttcgcccacc accgcgccgg tgaaggcgaa gcccaccgcc
     4501 accttgagat tgcccagcac ccacaccgtc accgacggca catagacctc gcgcaccagg
     4561 atgccggggc cgccgcccag ggttttgacc cgctccacca accgcgtgtc cacgtcgcgc
     4621 acgccggtat agacggcgaa gaagatcagc accgccacca ggatcagcga ca
//
LOCUS       DATIKR010000215         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_76261, whole genome shotgun sequence.
ACCESSION   DATIKR010000215 DATIKR010000000
VERSION     DATIKR010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76261"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..1486
                     /locus_tag="VLL76_03250"
     CDS             110..1486
                     /locus_tag="VLL76_03250"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HSV28540.1"
                     /translation="MSAPAKPSGEPIASKSELVAYLESGNKPKSDWRIGTEHEKFAYT
                     LDDGRPLPYAGERGIRAVLEGLIKLGWHPVEENGNVIALLALLDDTGASVTLEPGGQL
                     ELSGAPLDSIHETCRETYAHLKQVKQVAARLHIGFLGMGFQPKWSRDDIPWMPKGRYK
                     IMREYMPKRGGKGLDMMLRTCTVQVNLDFASEADMVKKFRTSLALQPVATALFACSPF
                     IDGKPSGLLSSRSDVWTDTDPDRCGMIPFVFEDGFGFERYVDYMLDVPMYFVYRDGRY
                     IDASGQSFRDFMDGRLPALPGERPTMGDWSDHLTTAFPEVRLKKYLEMRGADGGPWRR
                     LCALPAYWVGLLYDQGALDAAWDLVKDWTIAEREALRADVPRLGLNAKVRGLTVRDLA
                     RETLKLSAAGLQARQRFNDSGRDESIFLDTLVAIAESGRTPAEEMLEAFHGRWRGSVD
                     PIFKEYAY"
     gene            1612..1905
                     /locus_tag="VLL76_03255"
     CDS             1612..1905
                     /locus_tag="VLL76_03255"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008418097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HSV28541.1"
                     /translation="MKCQSLEQVRENIDRLDRQIVPLLAERAGYVEQAARFKDTKAKV
                     VDTDRIEAIVLKVRHMAVEEGTSPDLIEHIYRAMIDAFIIHESQEWKKVHEGE"
     gene            1982..2149
                     /locus_tag="VLL76_03260"
     CDS             1982..2149
                     /locus_tag="VLL76_03260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28542.1"
                     /translation="MPDHHDDDNDIRRRHVDFPPVKTPAMLALGNAVGLIMILVLAWV
                     IATYGFDIELP"
     gene            complement(2122..>2305)
                     /locus_tag="VLL76_03265"
     CDS             complement(2122..>2305)
                     /locus_tag="VLL76_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28543.1"
                     /translation="EGGTWRPLGVTADKVMKLVERIKDGAPALGGYAESLVNEAVARG
                     YLLPPSAGHGSSMSKP"
BASE COUNT          412 a          813 c          727 g          353 t
ORIGIN      
        1 cgcttaccct ggcgcccccc aatgcctaaa tgaaacttga cgcccaccgc ccggttggct
       61 ttgctgacgg gacccgcccg ctccgccccc aggatcagga agacatccaa tgtccgcacc
      121 cgccaagccg agcggcgagc cgatcgcttc caagagcgag ttggtcgcct atctggaatc
      181 gggcaacaag cccaagtccg actggcgcat cggcaccgag cacgagaaat tcgcctacac
      241 cttggacgac gggcgcccgc tgccctatgc cggcgagcgg ggcatccgcg ccgtactgga
      301 aggcctgatc aagctgggct ggcatccggt cgaggagaac ggcaacgtca tcgccctgct
      361 ggccctgctg gacgacaccg gcgcctcggt gacgctggag cccggcggcc agttggaact
      421 atccggtgcc cccctggact cgatccacga gacctgccgc gagacctatg cccacctcaa
      481 acaggtcaag caggtcgccg cccggctgca tatcggcttc ctgggcatgg gcttccagcc
      541 gaaatggagc cgcgacgaca tcccgtggat gcccaagggc cgctacaaga tcatgcgcga
      601 gtacatgccc aagcgcggcg gcaagggcct cgacatgatg ctgcgcacct gcaccgtgca
      661 ggtgaacctg gacttcgcca gcgaagccga catggtcaag aagttccgca cctcgctggc
      721 gctgcagccc gtcgccaccg ccctgttcgc ctgctcgccc ttcatcgacg gcaagccctc
      781 gggcctgctg tcgtcgcgct cggacgtgtg gaccgacacc gatcccgacc gctgcggcat
      841 gatcccgttc gtgttcgagg acggcttcgg cttcgagcgc tacgtcgact acatgctcga
      901 cgtgcccatg tatttcgtct accgcgacgg caggtacatc gacgcctcgg gccagtcgtt
      961 ccgcgacttc atggacggcc gcctgccggc cctgccgggc gagcgcccga ccatgggcga
     1021 ctggagcgac cacctgacca ccgccttccc ggaagtgcgc ctcaagaagt acctggagat
     1081 gcgcggcgcc gacggcggcc cgtggcgccg gctgtgcgcc ctgcccgcct attgggtcgg
     1141 cctgctgtac gaccagggcg ccctggacgc cgcctgggat ctggtcaagg actggaccat
     1201 cgcggagcgc gaggcgctgc gcgccgacgt cccccgcctg ggcctcaacg ccaaggtgcg
     1261 cggcctgacg gtgcgcgacc tggcgcgcga gacgctgaag ctgtcggccg ccggcctgca
     1321 ggcgcggcag cgcttcaacg attccggccg cgatgaatcc atctttctcg acaccctggt
     1381 cgccatcgcc gaatcggggc gcacccccgc cgaggaaatg ctggaggcct tccacggccg
     1441 gtggcgcggc agcgtcgatc cgatcttcaa ggaatatgcg tattagccgc ccacctgtca
     1501 tgctgcgcgg agcgaagcat ctttcaggca agctggccgc cgccccggct gaaagatcct
     1561 tcgcctgcgg ctcaggatga cagccgcgaa gcaaaaacgg agaaaacgtc catgaagtgt
     1621 caaagccttg agcaggtgcg cgagaacatc gaccgcctcg accggcagat cgtgccgctg
     1681 ctggccgagc gcgccggcta tgtggaacag gccgcccgct tcaaggacac caaggccaag
     1741 gtggtggaca ccgaccgcat cgaggccatc gtgctgaagg tccgccacat ggcggtcgag
     1801 gaaggcacca gccccgacct catcgagcac atctaccgcg ccatgatcga cgccttcatc
     1861 atccacgaga gccaggagtg gaagaaggtt cacgaggggg agtgatcgct cggcggcctt
     1921 ggcggatcta ggcatcggcg gtagaacagt catgagccgc ctttacaccg gggagccgtc
     1981 aatgcccgat caccatgacg acgacaacga catccggcgc cgccacgtcg atttcccgcc
     2041 ggtgaagacg ccagccatgc tcgcgctggg caacgccgtc gggctgatca tgatcctggt
     2101 cctggcgtgg gtgatcgcca cctacggctt cgacatcgaa ctgccgtgac cggctgaggg
     2161 cgggagcagg tagccgcggg caaccgcctc gttgaccagc gactcggcgt aaccgccaag
     2221 ggccggcgcg ccgtccttga tccgctcgac cagcttcatg accttgtccg cggtcacgcc
     2281 aagcggccgc caggtgcccc cttcg
//
LOCUS       DATIKR010000216         1667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_160494, whole genome shotgun sequence.
ACCESSION   DATIKR010000216 DATIKR010000000
VERSION     DATIKR010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160494"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1596
                     /gene="glgB"
                     /locus_tag="VLL76_03270"
     CDS             <1..1596
                     /gene="glgB"
                     /locus_tag="VLL76_03270"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HSV28544.1"
                     /translation="LKADPYGHFAEVPPKTASIVWDLAERDWQDGEWMARRQAANDRH
                     APVSIYEVHLASWRRVPDEDNRSLTYLELADQLSAYVKDLGFTHIELLPVHEHPFSGS
                     WGYQPVGLFAPTSRFGNPEEFRAFVERMHQNGIGVIIDWVAGHFPSDPHGLHYFDGTH
                     LYEHEDPRLGFHKDWNTLIYNYGRREVANYLFSNALYWIEQYHIDGLRVDAVASMLYL
                     DYSREAGEWIPNKFGGNENLEAIDFIRRMNEVVYGEHPGAMTIAEESTAWPMVSRPVY
                     IGGLGFGYKWNMGWMHDTLRYISKEPIHRRYHHDDLTFGLLYAFHENFVLPLSHDEVV
                     HGKGSIFGRMPGDRWQRFANLRAYYAFMWTHPGKKLLFMGSEFGQEREWDAEGSLDWH
                     LLDDEMHEGARRCVRDLNRIYREVPALHQMDVDPHGFAWIDCNDRDNSVLTYLRRAQD
                     PEDICVMGCNFTPIIRDGYRVGVPYPGYYREILNTDSEWYGGSNIHNDGGKQAEAVPW
                     HGHPYSLCLTLPPLATCVFKRER"
BASE COUNT          299 a          585 c          496 g          287 t
ORIGIN      
        1 ctgaaggccg acccctacgg ccatttcgcc gaggttccgc ccaagaccgc ctccatcgtc
       61 tgggatttgg ccgagcgcga ctggcaggac ggcgagtgga tggcgcgccg ccaggccgcc
      121 aacgaccgcc acgcccccgt cagcatctac gaggtccatc tcgccagttg gcgccgcgtg
      181 ccggacgagg acaaccgttc gctgacctat ctggaactgg ccgaccagct ctcggcctac
      241 gtcaaggatc tgggcttcac ccatatcgag ctgctgccgg tgcacgagca tccgttctcg
      301 gggtcttggg gctaccagcc ggtgggcctg ttcgcgccga cctcgcggtt cggcaacccc
      361 gaggagttcc gcgccttcgt cgagcgcatg caccagaacg gcatcggcgt catcatcgat
      421 tgggtcgccg gccatttccc cagcgatccg cacggcctgc attatttcga cggcacccac
      481 ctgtacgagc acgaggaccc gcgccttggg ttccacaagg actggaacac gctgatctac
      541 aattacggcc gccgcgaggt cgccaactac ctgttctcga acgcgctgta ttggatcgag
      601 cagtatcaca tcgacggcct gcgcgtggac gcggtggcct ccatgctgta cctcgactac
      661 tcgcgcgagg ccggcgagtg gattcccaac aagttcggcg gcaacgagaa tttggaggcc
      721 atcgacttca tccgccgcat gaacgaggtg gtctacggcg agcatcccgg cgccatgacc
      781 atcgccgagg aatccaccgc ctggcccatg gtgtcgcggc cggtctacat cggcggctta
      841 ggcttcggct acaagtggaa catgggctgg atgcacgaca cgctgcgcta catcagcaag
      901 gagccgatcc accgccgcta tcaccacgat gatttgacct tcggcctgct ctacgccttc
      961 catgaaaact tcgtgctgcc gctcagccac gacgaggtgg tgcacggcaa gggctcgatc
     1021 ttcggccgca tgcccggcga ccgctggcag cgcttcgcca acctgcgcgc ctattacgcc
     1081 ttcatgtgga cccatcccgg caagaagctg ctgttcatgg gctcggaatt cggccaagag
     1141 cgcgagtggg acgccgaggg cagcctagac tggcacctgc tggacgacga gatgcacgag
     1201 ggcgcgcggc gctgcgtgcg cgacctcaac cgcatctacc gcgaggtgcc ggcgctgcac
     1261 cagatggacg tcgatcccca cggcttcgcc tggatcgact gcaacgaccg cgacaattcc
     1321 gtgctgacct atctgcgccg cgcccaggac cccgaggaca tctgcgtcat gggctgcaac
     1381 ttcaccccca tcatccgcga cggctatcgc gtcggcgtgc cctatcccgg ctattaccgc
     1441 gagatcctca ataccgacag cgaatggtac ggcggctcga acatccacaa cgatggcggc
     1501 aagcaggccg aggcggtgcc atggcacggc cacccctatt ccctgtgcct gaccctgccg
     1561 ccgctggcga cttgcgtgtt caagcgggaa cgctgatcgt cgggtcagct tcagccctcc
     1621 gccccaaact cgtcaccccg gccaagcccg cgtgcgaagc acgcatt
//
LOCUS       DATIKR010000217         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_51479, whole genome shotgun sequence.
ACCESSION   DATIKR010000217 DATIKR010000000
VERSION     DATIKR010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51479"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VLL76_03275"
     CDS             complement(<1..398)
                     /locus_tag="VLL76_03275"
                     /inference="COORDINATES: protein motif:HMM:NF021435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2141 domain-containing protein"
                     /protein_id="HSV28545.1"
                     /translation="MVLSPPAATLAVMLAAAQAQPSTPRCGDSQTRLELRVEGLRSAA
                     GLVTVVVYGDRPEDFLVKGRRLVKARLKAAESRVTACLPMPHPGTYALAAYHDEDGDG
                     KFDRSLVGLPTEGFAFSNDPPTIAGLPSFNA"
     gene            397..1563
                     /locus_tag="VLL76_03280"
     CDS             397..1563
                     /locus_tag="VLL76_03280"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HSV28546.1"
                     /translation="MVDIKAFHRAAHIWAMPRPRFNVIDRYLLSEAVRPLAATLTVVM
                     AALLMERMLRLFRLVTGGGGPLDLVAWMALNLVPHYLGLAIPAALFLAVYLVIGRLGA
                     DNETDALRGAGVSLRRAVRSLLLLGMALGVVNLVVVGWLQPHGRYQYRALVHAVSQAV
                     WDALLPERTLVRVAEGTVLSAEQVLGDGRIAGVFVRQEKDGAITVTTARQGRLVLTDS
                     GGAMRIDLAQGVLARTEADGTTRSLAFTQLSDVVTVRVAPEAFRPRGQEERELTLPEL
                     AQPHAAIPQRRLDAELHARLARAITVPFIPMLAVGVGIAAKRSRRGLGLGVGAVALFV
                     FHHLLLTGEGMAEAGRMAVVPAIWAPVLAFALVCLGAFLRLDRRPGDPVLGVVR"
     gene            1560..>1847
                     /locus_tag="VLL76_03285"
     CDS             1560..>1847
                     /locus_tag="VLL76_03285"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HSV28547.1"
                     /translation="MTLGRYLRWLFMLRFVAALLALTALLQLVDLMDRSDEILDRGLG
                     WPGMLRFAVLRLPLVVPSVIPIAALASAVLTLAGLAYSSEVAAMRASGLALG"
BASE COUNT          208 a          616 c          705 g          318 t
ORIGIN      
        1 gcgttgaacg aggggaggcc ggcgatggtg ggcggatcgt tggagaaggc gaagccctcg
       61 gtcggcaggc cgacgaggga ccggtcgaat ttcccgtcgc cgtcctcgtc gtgataggcg
      121 gccagggcgt aggtgccggg atggggcatg ggcaggcagg ccgtcaccct ggattcggcc
      181 gccttcaggc gcgccttgac cagccggcgg cccttgacca ggaagtcctc ggggcggtcg
      241 ccatagacca ccaccgtcac cagcccggcg gccgagcgca ggccctcgac acgcaattcc
      301 aggcgggttt gggaatcgcc gcaacggggc gtcgatggct gggcctgggc ggcggccagc
      361 attacggcaa gggtggcggc gggtggggac agcaccatgg tcgatatcaa agcctttcac
      421 cgggccgccc atatctgggc aatgccccgc ccccgcttca acgtcatcga ccgatatctc
      481 ctgtccgagg ccgtgcggcc tttggcggcg acgctgaccg tggtcatggc ggcgctgttg
      541 atggagcgca tgctgcgcct gttccggctg gtcaccggcg gcggcgggcc gctggacctg
      601 gtggcctgga tggcgctcaa cctggtgccc cattacctcg gcctcgccat tccggcggcg
      661 ctgttcctgg cggtgtatct ggtcatcggt cggctgggcg ccgacaacga gaccgatgcc
      721 ttgcgcgggg cgggcgtgtc gctgcgccgg gcggtgcgct cgctgctgct gctgggaatg
      781 gccttggggg ttgtcaatct ggtggttgtc ggctggctgc agccgcacgg ccgctaccag
      841 tatcgcgcct tggtccacgc ggtcagccag gcggtgtggg acgccctgtt gcccgagcgc
      901 accctggtgc gggtggccga gggcacggtt ctgtcggccg agcaggtgct gggcgacggc
      961 cgcatcgccg gggtgttcgt gcgccaggag aaggacggcg ccatcaccgt caccacggcg
     1021 cggcagggcc ggctggtgct gaccgacagc ggcggcgcca tgcgcatcga cctggcccag
     1081 ggcgtgctgg cgcgcaccga ggccgacggc accacccgct cgctggcctt cacgcaattg
     1141 tccgacgtgg tgacggtgcg cgtggcgccc gaggccttcc gcccgcgcgg gcaggaggaa
     1201 cgcgagctga ccctgcccga gttggcgcaa ccccatgccg ccatcccgca acgccgcctg
     1261 gatgccgagc tgcacgcccg gctggcccgc gctatcaccg ttccgttcat tcccatgctg
     1321 gcggtgggcg tcggcatcgc cgccaagcgc agccggcgtg ggctggggtt gggcgtgggc
     1381 gcggtggcgc tgttcgtgtt ccaccacctg ttgctgaccg gcgagggcat ggccgaggcg
     1441 gggcgcatgg cggtggtgcc ggccatatgg gcgccggtgt tggcctttgc gctggtgtgc
     1501 ctgggggcct tcctgcgcct cgaccgccgc cccggcgacc cggtgctggg ggtggtgcga
     1561 tgaccttggg gcgctacctg aggtggctgt tcatgctgcg cttcgtcgcg gcgctgctgg
     1621 cgctgaccgc cctgctgcaa ctggtcgacc tgatggaccg ctcggacgag atcctcgacc
     1681 gcggtctggg ctggcccggc atgctgcgtt tcgccgtgct gcgcctgccg ctggtggtgc
     1741 cctcggtcat tcccatcgcc gccctggcgt cggcggtgtt gacgcttgcc ggcttggcct
     1801 attccagcga ggtcgccgcc atgcgcgcct cggggctggc gctgggg
//
LOCUS       DATIKR010000218         3153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_160498, whole genome shotgun sequence.
ACCESSION   DATIKR010000218 DATIKR010000000
VERSION     DATIKR010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3153
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160498"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /gene="paaI"
                     /locus_tag="VLL76_03290"
     CDS             <1..306
                     /gene="paaI"
                     /locus_tag="VLL76_03290"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HSV28548.1"
                     /translation="SMTVTEPMLNGLGLCHGGFTYKLADDAFAYACNSHNRNAVALSC
                     SITYPAAARLGDRLTAIAEERHRKGRNGTYDVTVTNQDGEVVALFRGHCRVIEGSVV"
     gene            380..1693
                     /gene="paaK"
                     /locus_tag="VLL76_03295"
     CDS             380..1693
                     /gene="paaK"
                     /locus_tag="VLL76_03295"
                     /EC_number="6.2.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020701075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047475 - phenylacetate-CoA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase PaaK"
                     /protein_id="HSV28549.1"
                     /translation="MDRTAPPPKDILEPIEYASRDEIAAIQTERLAWSIKHAYDNVEH
                     YRKKFDAHGVHPSDFKKLEDLAKFPFTTKEDLRQTYPFGMFAVPMDRVVRVHASSGTT
                     GKPTVVGYTQNDIDMWAGLIARSIRASGGRRGDKVHIAYGYGLFTGGLGAHYGAEKLG
                     CTVIPMSGGQTERQIQLIQDFRPDIIMVTPSYMLAIADEMERQGIDAQTCSLKIGIFG
                     AEPWTGAMRGEIEKRLGIQAIDIYGLSEVIGPGVANECVESKDGLHIWEDHFLPEVIN
                     PESGAVLPDGQMGELVFTSLTKEALPVIRYRTRDLTRLLPGTARSFRRMDKITGRSDD
                     MLIIRGVNVFPTQIEELILKDLRLAPHYQLEVNRDNHLDSLTVNVEMRADAWDQAPAG
                     AAAKDLTHHIKSYIGISTKVNVVAPGSIERSIGKAKRVVDKRPKA"
     gene            1775..2695
                     /locus_tag="VLL76_03300"
     CDS             1775..2695
                     /locus_tag="VLL76_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011713471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HSV28550.1"
                     /translation="MAITAGLKRCLALLVAAISLWACDGKGGQPYAPDYSQSPPTDRK
                     VYVFGVHPLHNPEQLDAIYSPLLAHVSTRLGGVDLRLEASSNYAHFERKLAERRFDFA
                     LPNPYQVLMALRHGYRVFAKMGDDQDFHGILLARKDGPIRSVADLKGKAVSYPAPTAL
                     AATMLPQRYLHDHGIDVTADIENRYVGSQESSIMNVVLGNVAAGATWPQPWRNFQRDN
                     PDAAAQLHIIAETPSLPSNGLIARDDVPAELVGKVGAILVSLHESPEGRALLQRCPTS
                     RFDPATDATYDPVRDFLVRFNANVRPVDLP"
     gene            2692..>3153
                     /locus_tag="VLL76_03305"
     CDS             2692..>3153
                     /locus_tag="VLL76_03305"
                     /inference="COORDINATES: protein motif:HMM:NF028512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV28551.1"
                     /translation="MTAPRPLSSLIRLATGSVRRKLVVGIALVHAVLMTLFVFDLSIR
                     QKDFMQGQQRERTEELARMVALNSRSWVLADDVQGLGEVVASLRDHPHMRYAMVIDQS
                     GRVLAHTDRAKVGMYVRDEISRALLAGPRETRHLPVGDLALDVAEPIASGGR"
BASE COUNT          563 a         1130 c          966 g          494 t
ORIGIN      
        1 agcatgaccg tcaccgagcc catgctgaac ggcctggggc tgtgccatgg cggcttcacc
       61 tacaagctgg ccgacgacgc cttcgcctac gcctgcaact cccataaccg caacgccgtg
      121 gcgctgtcgt gcagcatcac ctatcccgcc gccgcccgcc tgggcgaccg cctgaccgcc
      181 atcgccgagg aacgccaccg caagggccgc aacggcacct acgacgtcac cgtcaccaac
      241 caggacggcg aggtggtggc gctgttccgc gggcattgcc gggtgatcga aggcagcgtg
      301 gtgtgacctt tttgttgcgg cgtggcacga attttaggta gacgtgcgcg accaaaggga
      361 ggattgccgc ttgaccgcca tcgaccgcac cgcgccgccg ccgaaggaca tcctggagcc
      421 gatcgagtac gccagccgcg acgagatcgc cgccatccag accgagcgtc tggcctggtc
      481 gatcaagcac gcctacgaca acgtcgagca ttaccgcaag aagttcgacg cccacggcgt
      541 ccatcccagc gatttcaaga aactggaaga cctggcgaag ttccccttca ccaccaagga
      601 agacctgcgc cagacctatc ccttcggcat gttcgccgtg cccatggacc gggtcgtgcg
      661 cgtccacgcc agctcgggca ccaccggcaa gccgaccgtg gtcggctaca cccagaacga
      721 catcgacatg tgggccggcc tgatcgcgcg ctctatccgc gcctcgggcg gccgtcgcgg
      781 cgacaaggtc cacatcgcct atggctacgg cctgttcacc ggcggcctgg gcgcccatta
      841 cggcgccgaa aagctgggct gcaccgtcat ccccatgtcg ggcggccaga ccgagcgcca
      901 aatccaactg atccaggact tccgccccga catcatcatg gtgacgccca gctacatgct
      961 ggccatcgcc gacgagatgg agcgccaggg catcgacgcc cagacctgct cgctgaagat
     1021 cggcatcttc ggcgccgagc cgtggaccgg cgccatgcgc ggcgagatcg agaagcgcct
     1081 gggcatccag gccatcgaca tctacggcct gtcggaagtc atcggtcccg gcgtcgccaa
     1141 cgaatgcgtc gagagcaagg acggcctgca catctgggaa gaccacttcc tgccagaggt
     1201 catcaacccc gagagcggcg ccgtgctgcc cgacggccag atgggcgagc tggtgttcac
     1261 cagcctgacc aaggaagcgc tgccggtcat ccgctaccgc acccgcgacc tcacccgcct
     1321 gctgcccggc accgcgcgca gcttccgccg catggacaag atcaccggcc ggtccgacga
     1381 catgctgatc atccgcggcg tcaacgtctt cccgacccag atcgaggagc tgatcctcaa
     1441 ggatttgcgc ctggcgccgc attaccagtt ggaggtcaac cgcgacaacc acctggattc
     1501 gctgacggtc aacgtcgaga tgcgcgccga cgcctgggac caggcccccg ccggcgccgc
     1561 cgccaaggac ctgacccatc acatcaagtc ctatatcggc atttccacca aggtgaacgt
     1621 ggtcgccccg ggcagcatcg agcggtcgat cggcaaggcc aagcgcgtgg tcgacaaacg
     1681 ccccaaggcc tgattacgca catcaggcct atgtctgata gactcgcggt tggtatccat
     1741 cctagctttg cgtcaggtgg gatggaggga ccgggtggcg atcacggctg gacttaagcg
     1801 ttgcctcgcc ttgctggtcg cggccatctc cctgtgggcg tgcgacggca agggtgggca
     1861 gccttatgcc cccgactatt cacaatcgcc gccaaccgac cgcaaggtct atgtcttcgg
     1921 cgtccacccg ctgcacaacc ccgagcaatt ggacgccatc tactcgcctc tgctggccca
     1981 tgtcagcacg cgcctgggcg gcgtcgatct gcggctggag gcgtcgagca actacgccca
     2041 tttcgagcgc aagctggccg aacgccggtt cgatttcgcg ctgcccaacc cctatcaggt
     2101 cctgatggcg ctgaggcacg gctatcgcgt cttcgccaag atgggcgacg accaggactt
     2161 ccacggcatc ctgctggcgc gcaaggacgg ccccatccgg tccgtcgccg acctcaaggg
     2221 caaggcggtg tcctatcccg cccccaccgc ccttgccgcc accatgctgc cgcaacgata
     2281 cctgcacgac cacggcatcg acgtcaccgc cgacatcgag aaccgttatg tcggctcgca
     2341 agaatcgtcg atcatgaacg tggtcctggg caacgtcgcg gcgggcgcca cctggccgca
     2401 gccgtggcgc aatttccagc gcgacaaccc cgatgccgcc gcccagttgc acatcatcgc
     2461 cgagaccccc agcctgccta gcaatggcct gatcgcccgc gacgacgtgc cggccgaatt
     2521 ggtcggcaag gtgggcgcca tcctggtcag cttgcacgaa agccccgagg gccgcgcctt
     2581 gctccagcgc tgcccgacca gtcggttcga ccctgccacc gacgctacct acgacccggt
     2641 gcgtgatttc ctggtgcggt tcaacgccaa tgtccggccg gtggacctgc catgacggcg
     2701 ccgcgccccc tgtcgagctt gatccgcctc gccaccggct cggtccgccg caaactggtc
     2761 gttggcatcg cgctggtcca cgcggtgctg atgaccctgt tcgtgttcga cctgtcgatc
     2821 cggcagaagg acttcatgca ggggcagcag cgggaacgca ccgaggaact ggcgcgcatg
     2881 gtggcgctga acagccgctc gtgggtactg gccgacgacg tccagggcct gggcgaagtg
     2941 gtcgcgtcgc tgcgcgacca cccgcacatg cgctacgcca tggtgatcga ccagagcggc
     3001 cgcgtgctgg cccataccga ccgcgccaag gtcgggatgt atgtgcgcga cgagatcagc
     3061 cgcgccctgc tggccggccc gcgcgagacc cgccatctgc cggtgggcga cctggcgctg
     3121 gatgtcgcag agcccatcgc cagcggtggg agg
//
LOCUS       DATIKR010000219         3142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_15283, whole genome shotgun sequence.
ACCESSION   DATIKR010000219 DATIKR010000000
VERSION     DATIKR010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15283"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VLL76_03310"
     CDS             complement(<1..198)
                     /locus_tag="VLL76_03310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family peptidase"
                     /protein_id="HSV28552.1"
                     /translation="MRIVRTTVAMLALGVLAGCGEGSTGLGLNLVPEGQVRQMGLEAW
                     QEIRSETPATRDRDMQARAERV"
     gene            476..934
                     /gene="rplM"
                     /locus_tag="VLL76_03315"
     CDS             476..934
                     /gene="rplM"
                     /locus_tag="VLL76_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HSV28553.1"
                     /translation="MKTFNAKPSEVQKKWVVIDADGVVLGRLASIISMRLRGKHLPTY
                     TPHVDMGENIIVINAEKVKLTGNKLADKTFYWHTGHPGGIKGRTMGQLLGGRYPERVI
                     EKAVERMITRGPLGRQQMKNLRVYAGPAHPHDAQSPEVVDVAAMNPKNKR"
     gene            939..1406
                     /gene="rpsI"
                     /locus_tag="VLL76_03320"
     CDS             939..1406
                     /gene="rpsI"
                     /locus_tag="VLL76_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007692725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HSV28554.1"
                     /translation="MADLSSLADLKASAPAAQPVHERKVDAQGRAYATGRRKNAVARV
                     WIKPGSGKIIVNGRDVTTYFARPVLRMLINQPFEAARAEGQFDVFCTVTGGGLSGQAG
                     ALRHGLSRALTYFDPATRPALKSGGFLTRDPRVVERKKYGKHKARRSTQFSKR"
     gene            complement(1470..2978)
                     /locus_tag="VLL76_03325"
     CDS             complement(1470..2978)
                     /locus_tag="VLL76_03325"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSV28555.1"
                     /translation="MDYEFQVAGQSIRLKPDDTLVGVRFREPAAKSMRAAVSRNRLGA
                     PVFPDRVEVPEEKFTLLPTTPLPAGPGRLSMASRQLASDPEVVRVTPVFRYGDRRVLA
                     TDRIVVSAKGGLDQARELADRRGWTIVREAEDSAVIALKENEDPLEEARKLAADESIA
                     WAEPDFVTISRHMPRRAPSSAQPQSDPLAEGQYVLDRIRAYEAWSLARPGRDVVVAII
                     DEGVDTTHPDLRAAIVASYDASDDDAWQEPNRNDAHGTACAGIAGADHDNDIGIKGVA
                     GGCGLMAIRIAYSLDSDPNRWVTRNSWIAAGIDWAWKNGASVLSNSWGGGTPSNQIVS
                     AFERARRKGRDGKGCVITIAAGNDFGPVLFPANLKGVLCVSASNEDDEPKTPNSSDGE
                     RWGTCHGPEVACAAPGVHMLTTDIAGGNGYGRGDYYPLFNGTSSATPVVSAVAALVLA
                     ANPGLSEREVREIICRTADKVGSVPYANGRNDLMGFGRVNAFEAVRAALPKV"
BASE COUNT          528 a         1110 c          986 g          518 t
ORIGIN      
        1 cacccgttcg gcgcgggcct gcatgtcgcg gtcgcgggtc gccggggttt cgctgcggat
       61 ttcctgccag gcctccagcc ccatctgccg cacctggccc tcgggcacca ggttgagtcc
      121 aagccccgtg gaaccctcgc cgcatccggc cagcacgccc aaggccagca tcgccacggt
      181 ggtgcgcacg atccgcatga ccgcctcctt gccatgtccc atccggatgt cggcaccggc
      241 ggcaagcgga tcaaccgtgg ttaaacttca gcgcagggaa aagctgaccg gcaccaccac
      301 agccaatcac caagaaaacc aagccatcca cggatggtat tataataccg caccactaac
      361 gcactgttat tccacgatat ttttcccgtt gactctggcg cgttcccagg cataatccgc
      421 gccttccgag ggctgcgttt ttgcgcggcc attcattggt tttgccgtgg gtgccatgaa
      481 gacctttaac gccaaaccgt ccgaagtgca gaagaagtgg gtcgtgatcg acgcggacgg
      541 cgtcgttctg ggccgcctcg ccagcatcat ctcgatgcgc ctgcggggta agcacctccc
      601 gacctacact ccccatgtcg acatgggcga gaacatcatc gtcatcaacg ccgagaaggt
      661 gaagttgacc ggcaacaagc tggccgacaa gaccttctac tggcacaccg gtcacccggg
      721 cggcatcaag ggccgcacca tgggccagct gctcggcggt cgctaccccg agcgcgtgat
      781 cgagaaggcc gtcgagcgca tgatcacccg tggtccgctg ggtcgccagc agatgaagaa
      841 cctgcgcgtg tacgccggcc cggcgcaccc gcacgacgcc cagtcgccgg aagtggtcga
      901 cgtggcggcg atgaacccga agaacaagag gtagtcccat ggccgatctc agcagcctgg
      961 ccgatctcaa ggcctccgct ccggccgccc agcccgtgca cgagcgcaag gtcgatgccc
     1021 agggccgtgc ctacgccacg ggccgccgca agaacgccgt cgcccgcgtg tggatcaagc
     1081 ccggttcggg caagatcatc gtcaacggcc gcgacgtcac cacctacttc gcgcgtccgg
     1141 ttctgcgcat gctcatcaac cagcccttcg aggcggctcg cgccgaaggt cagttcgatg
     1201 tgttctgcac ggtcaccggc ggcggtctgt ccggtcaggc cggcgccctg cgccacggcc
     1261 tcagccgcgc cctgacctac ttcgacccgg ccacccggcc ggcgctgaag tcgggcggct
     1321 tcctgacccg cgacccgcgc gtcgtcgagc gtaagaagta cggcaagcac aaggctcgcc
     1381 gttcgaccca gttctcgaag cgctaaaccg cttccgatat ctggacggaa aggggtccgg
     1441 accgcgaggt ccgggcccct ttttcttgct cacaccttcg gcaaagccgc ccgcaccgcc
     1501 tcgaaggcgt tgacccggcc gaatcccatc aggtcgttgc ggccattggc atagggcacc
     1561 gacccgacct tgtcggcggt gcggcagatg atctcccgca cctcgcgttc gctcagaccg
     1621 ggattggcgg ccagcaccag tgcagccacc gccgacacca ccggcgtcgc cgaggacgtc
     1681 ccgttgaaca gcgggtaata gtcaccgcgc ccatagccat ttccgcccgc gatgtccgtc
     1741 gtcagcatgt ggacgccggg ggccgcacag gcgacctcgg gaccgtggca ggttccccag
     1801 cgttcgccgt cgctgctgtt gggggttttc ggttcatcat cctcgttgct ggccgacacg
     1861 cacagcacac ccttgaggtt ggccgggaac agcaccggtc cgaaatcatt gccggcggcg
     1921 atggtgatga cacagccctt gccgtcgcgc ccctttctcc gggcgcgttc gaaggctgaa
     1981 acgatctggt tcgagggcgt gccgccgccc cacgaattgg acaacaccga cgcgccgttc
     2041 ttccaggccc agtcgatgcc ggcggcgatc cagctgttgc gggtcaccca gcggttgggg
     2101 tcgctgtcga gggaataggc aatgcggatc gccatcagcc cgcaaccacc ggccacgccc
     2161 ttgatgccga tgtcgttgtc gtggtcggcg ccggcgatcc cggcgcaggc ggtgccgtgg
     2221 gcatcgttgc ggttcggctc ctgccacgcg tcgtcgtcgc tggcgtcata ggatgccacg
     2281 atggcggcac gcagatcggg atgggtggta tccacgccct cgtcgatgat ggcgaccacg
     2341 acgtcgcgtc cgggtcgggc cagcgaccac gcctcgtagg cgcggatgcg gtccagcacg
     2401 tactgcccct cggccaacgg gtccgattgc ggctgtgccg acgacggcgc ccgccgcggc
     2461 atgtgccgcg agatggtcac gaaatccggt tcggcccagg cgatggattc gtccgccgcc
     2521 agcttccgcg cctcttccag tggatcctcg ttttccttga gcgcgatcac cgcgctgtcc
     2581 tcggcctcgc gcacgatggt ccagccgcgc cgatccgcca actcgcgcgc ctggtccagg
     2641 ccgcccttgg ccgacacgac gatgcggtcg gtcgccagca cccggcggtc gccatagcgg
     2701 aacacgggcg tcacgcgcac cacctcggga tccgacgcca actgccggct ggccatggac
     2761 aggcgtccgg gaccggctgg caacggggtg gtcggcagca gggtgaactt ttcctcgggc
     2821 acctcgacgc ggtcggggaa gaccggggcg cccagccggt tgcgcgacac tgccgcgcgc
     2881 atgctcttgg ccgccggttc gcggaaccgc accccgacca gggtgtcgtc gggcttgaga
     2941 cggatcgact gaccggcgac ctgaaattcg taatccatgg cctccctcct cttttcgaga
     3001 acccggcgga gcatccaccc ggcgagggcg taacacccgg cgcggcacgt tcaaaactag
     3061 tcacaccccg tgcggaattc gcccgagcgt gaggagtaac gccttggtgg agggacactc
     3121 gacacattga cagcgccaaa gc
//
LOCUS       DATIKR010000220         1995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_64297, whole genome shotgun sequence.
ACCESSION   DATIKR010000220 DATIKR010000000
VERSION     DATIKR010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64297"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VLL76_03330"
     CDS             <1..406
                     /locus_tag="VLL76_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV28556.1"
                     /translation="MEKLAQVGLAASAGELSPSELSGGMQKRVALARAIATTPEIIFF
                     DEPTTGLDPIMADVINDLIVKCTKELGATTLSITHDMASARKIADRIAMLYKGRLIWV
                     GPAKDVDHSGNEFVDQFIHGRAEGPIKMELRA"
     gene            446..721
                     /locus_tag="VLL76_03335"
     CDS             446..721
                     /locus_tag="VLL76_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28557.1"
                     /translation="MAEIDIAAVFQLLGSVAQDVRGLKQDVSGLKHDVSGLKHDMSNV
                     KADLAGVRQTLTEYHASVLGHGVMISDLEDRVRRIERHLNLPPAAAE"
     gene            722..>1995
                     /gene="radA"
                     /locus_tag="VLL76_03340"
     CDS             722..>1995
                     /gene="radA"
                     /locus_tag="VLL76_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HSV28558.1"
                     /translation="MAKSPSRFVCQECGSVTSKWAGKCEACGAWNSIVEEAARDEIPK
                     GLSGKPGRKIDFVGLEGTAAPLPRYVTGIKELDRVCGGGLVPGSALLIGGDPGIGKST
                     MLLQATAALAMQVPGVAYISGEEAVDQVRMRAQRLGLAKAPVQLASATNLRDIIASLD
                     GPEAPKVVVIDSIQTVYADNVESAPGSVAQVRACAHELIRLAKKRGFVLFLVGHVTKE
                     GTIAGPRVMEHMVDTVLYFEGDRGHQFRILRAVKNRFGATDEIGVFEMTDCGLSEVGN
                     PSALFLAERRGNVSGSCVFAGMEGTRPMLVEIQALVAPSTLSSPRRAVVGWDSNRLSM
                     VLAVLDARCGLALSGNDVYLNVAGGLRIAEPAADLAVAAALVSSATDTPAPADMVVFG
                     EIGLSGEVRAVSQTDARLKEAAKLGFAQATVPA"
BASE COUNT          333 a          681 c          649 g          332 t
ORIGIN      
        1 catggaaaag ctggcccagg taggcctggc cgcgtcggcc ggcgagctgt cgccgtccga
       61 gctttccggt ggcatgcaga agcgcgtcgc cctggcccgc gccatcgcca ccacgcccga
      121 gatcatcttc ttcgacgagc cgaccaccgg cctcgacccc atcatggccg acgtgatcaa
      181 cgacctgatc gtgaagtgca ccaaggaact gggcgccacc accctgtcca tcacccacga
      241 catggcctcg gcccgcaaga tcgccgaccg catcgccatg ctctacaagg gccgcctgat
      301 ctgggtcggc ccggccaagg acgtcgatca ttccggcaac gagttcgtcg atcagttcat
      361 ccacggccgc gccgaggggc cgatcaagat ggaactgcgg gcctaggcac gctatattag
      421 cggcggttgc aaatagaggt tcggcatggc tgaaatcgac atcgcagctg ttttccaact
      481 gctgggcagc gtggcgcagg atgtgcgcgg cctcaagcag gacgtgtccg gattgaagca
      541 cgacgtgtcc ggcctcaagc acgacatgtc caacgtgaag gccgatctgg ccggcgtgcg
      601 tcaaaccctg accgaatacc acgcctcggt cctgggccat ggcgtgatga tcagcgacct
      661 cgaagaccgc gtccgccgca tcgagcgcca tctcaacctg ccgcccgccg cagccgaata
      721 attggctaag tccccttccc gcttcgtctg ccaggaatgc ggttcggtca ccagcaagtg
      781 ggccggcaag tgcgaggcgt gcggcgcatg gaactccatc gtcgaggaag ccgcccgcga
      841 cgagatcccc aaggggctgt cgggcaagcc gggccgcaag atcgacttcg tcgggcttga
      901 aggcaccgcc gcgcccctgc cccgctacgt caccggcatc aaggaactgg accgcgtctg
      961 cggcggcggc ctggtgcccg gctcggcgct gctgatcggc ggcgaccccg gcatcggcaa
     1021 atccaccatg ctgctgcaag ccactgccgc gcttgcgatg caggttcccg gcgtcgccta
     1081 catctcgggc gaagaggcgg tggaccaggt gcgcatgcgc gcccagcgcc tgggcctggc
     1141 caaggcgccg gtgcaactgg cgtcggccac caacctgcgc gacatcatcg ccagcctgga
     1201 cgggcctgag gcgcccaagg tggtggtgat cgattcgatc cagaccgtct atgccgacaa
     1261 cgtcgaatcg gcgccgggtt cggtggcgca ggtgcgggcc tgtgcccatg aactgatccg
     1321 cctggccaag aagcgcggct tcgtgctgtt cctggtcggc cacgtcacca aggaaggcac
     1381 catcgccggc ccgcgcgtga tggagcacat ggtcgacacc gtgctgtatt tcgagggcga
     1441 ccgcggccac cagttccgca tcctgcgcgc ggtgaagaac cgcttcggcg ccaccgacga
     1501 gatcggcgtg ttcgagatga ccgattgcgg cctgtccgag gtcggcaacc cgtcggccct
     1561 tttcctggcc gagcggcgcg gcaacgtttc ggggtcgtgc gtgttcgcgg gcatggaagg
     1621 tacccgcccc atgctggtcg aaatccaggc gttggtcgcc cccagcaccc tgtccagccc
     1681 acgccgcgcc gtggtgggat gggattcgaa ccgtttgagc atggtgctgg cggtgctcga
     1741 cgcccgatgc gggcttgctt tgtcgggcaa tgacgtttat ttgaacgtcg ccggcggatt
     1801 aaggatcgcc gagcctgcgg ccgatctcgc ggttgccgcg gctctggtct cttccgccac
     1861 cgacactcca gctcccgccg acatggtggt tttcggagag atcggacttt ccggcgaggt
     1921 tcgcgcggtc agccagaccg acgcgcgcct caaggaggcc gccaagctcg gcttcgccca
     1981 ggccaccgtg ccggc
//
LOCUS       DATIKR010000221         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_15341, whole genome shotgun sequence.
ACCESSION   DATIKR010000221 DATIKR010000000
VERSION     DATIKR010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15341"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /gene="coxB"
                     /locus_tag="VLL76_03345"
     CDS             complement(<1..788)
                     /gene="coxB"
                     /locus_tag="VLL76_03345"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HSV28559.1"
                     /translation="MRRFPWAWAVACAALPSIALADEPLPWAIGFQKGASPTMEQITT
                     LSTILNGIIVAIVVLVTALVAYAAWRFNAKRNPEPATWSHNTKLEIAWTAIPAIILLI
                     IAVPSFRLLYFMDRVQDADMTLKVVGHQWYWTYQYPDHDFQFDALMVADTDLQPGQRR
                     LLTTDNEVVLPVGVPIRIQMTADDVIHAWAVPALGIKTDTVPGRLNETWVQINNPGVY
                     YGQCSELCGVNHGFMPIMVRAVPKEEYDRWTAEAKTKFASISGRT"
     gene            complement(1002..>1664)
                     /locus_tag="VLL76_03350"
     CDS             complement(1002..>1664)
                     /locus_tag="VLL76_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28560.1"
                     /translation="GFAVTMGMAEQRDDGLSGATERRAMLGEATKRLRDGTVLGVQVG
                     SLSEAEGPLASSAGGAFGFDGDADTVFTGLFAATPLSSQATLFGRWGQGFTDGDALNG
                     GLWRGGDTIRSESFALGTTLRQDTGTWSFTASRPLRVTSGHAVLGVPVGRAMDGSVLY
                     RDASVDLAPSGAQTDLELSWSATLADNQRLVLGGMLTLQPGHDADAGPAFAAGAKYRF
                     RW"
BASE COUNT          268 a          548 c          576 g          272 t
ORIGIN      
        1 gtgcgccccg agatgctggc gaacttggtc ttggcctcgg cggtccagcg gtcgtattcc
       61 tccttgggca cggcgcggac catgatcggc atgaaaccat ggttgacgcc gcacagttcc
      121 gaacattggc cgtaatagac ccccggattg ttgatctgca cccaggtctc gttcagccgg
      181 cccggcacgg tgtcggtctt gatccccaag gcgggcaccg cccaggcgtg gatgacgtcg
      241 tcggcggtca tctggatgcg gatcggcacg cccaccggca gcaccacctc gttgtcggtg
      301 gtcagcaggc ggcgctggcc gggctgcagg tccgtgtcgg cgaccatcag cgcgtcgaac
      361 tggaaatcgt ggtcggggta ctggtacgtc cagtaccact ggtggccgac caccttcagc
      421 gtcatgtcgg cgtcctgcac ccggtccatg aaatagagca ggcggaacga cggcaccgcg
      481 atgatcagca ggatgatggc cgggatggcg gtccaggcga tttccagctt ggtgttgtgc
      541 gaccaggtgg ccggttccgg gttgcgcttg gcgttgaagc gccacgcggc ataggccacc
      601 aaagccgtca ccagcacgac gatggcgacg atgatgccgt tcaggatggt ggacagggtg
      661 gtgatctgct ccatggtggg cgaggcgccc ttctggaagc cgatggccca gggcagcggt
      721 tcgtccgcca gggcaatact gggcagggcc gcgcacgcga ccgcccacgc ccaaggaaat
      781 cgtcgcatgg ccgtctgcct ccctgcgaat ccgtcccctc tgataatcac tattatgact
      841 ggggttcccc ccttggggtt ccaatacccc ctgggcgaaa ggagaggagc ttcaattttt
      901 cattgtcatc ctgaggcgaa gccgaaggat ctttcagccg aggtggcggc cgcccgtgcc
      961 tgaaagatgc ttcgctgcgc tcagcatgac aaagggactg ctcaccacct gaaccgatac
     1021 ttcgctcccg ccgcgaaggc cgggccggcg tcggcgtcgt ggccgggctg cagggtcagc
     1081 atgccgccca ggacgaggcg ctggttgtcg gccagggtgg cgctccagct cagttccagg
     1141 tcggtctggg cgccggacgg agccaggtcc acgcttgcgt cgcgatagag caccgagccg
     1201 tccatggccc ggccgaccgg cacgcccaac accgcatggc ccgacgtcac ccgcaacggc
     1261 cgcgaggcgg tgaacgacca ggtgccggtg tcctggcgca gggtggtgcc cagcgcgaag
     1321 ctctcgctgc ggatggtgtc gccgccgcgc cacaggccgc cgttcaaagc gtcgccgtcg
     1381 gtgaagccct ggccccagcg gccgaacagg gtggcttggg acgacagcgg ggtggcggcg
     1441 aacaggccgg tgaacacggt gtcggcatcg ccgtcgaagc cgaaggcgcc gcccgcgctg
     1501 gacgccagcg gtccctcggc ctcggacagc gagccgacct gcacgcccag cacggtgccg
     1561 tcgcgcaggc gcttggtggc ctcgcccagc atggcgcggc gttcggtcgc gccggacagg
     1621 ccatcatcgc gctgctcggc catgcccatg gtcacggcga agcc
//
LOCUS       DATIKR010000222         2527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_233369, whole genome shotgun sequence.
ACCESSION   DATIKR010000222 DATIKR010000000
VERSION     DATIKR010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233369"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VLL76_03355"
     CDS             complement(<1..220)
                     /locus_tag="VLL76_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28561.1"
                     /translation="MPLVVVQTTIPGTDAKPFRITEVLGRVADNADEALEAAAYHIGD
                     AEHVSDFLTARWHAEGGYWLVSYEPVPEI"
     gene            complement(294..1502)
                     /locus_tag="VLL76_03360"
     CDS             complement(294..1502)
                     /locus_tag="VLL76_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HSV28562.1"
                     /translation="MATIQLQEPVYRGDSGPVFFAAGFRPFFLSAGALAALLLPLWLV
                     VWTGGATLGLTMPPAVWHGHEMVFGFAAAAVGGFLLTAVPNWTNTHHVSGRPLMVLFA
                     AWLAGRLAFALAGVLPAWAVAAADLVYLPLLAAMMAGPLIRAGKWRNIAFVPILAAFT
                     VANAAVHLDLVLGVGHAMTGVYAGIVLLLVMITVVGGRIVPSFTQNWLAMQGRPVEVR
                     SIAWIEKGGAVAIVLVAGLFAAVAPTSPAAGIALLAAAAVHLLRMSRWHGIKTLSNPI
                     LWVLHLGYLWLVIGLALLGLSSFVDALPPSAAVHALTAGCIGTMIIGVMTRAALGHSG
                     RPLVLSRWIVAAYVLLSLGAVLRVAAPLADAQVAMTHAGGTLWALAWLLFVVVYAPIV
                     VRPRADGRPG"
     gene            1717..>2527
                     /gene="nifB"
                     /locus_tag="VLL76_03365"
     CDS             1717..>2527
                     /gene="nifB"
                     /locus_tag="VLL76_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009399 - nitrogen fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogenase cofactor biosynthesis protein NifB"
                     /protein_id="HSV28563.1"
                     /translation="MSSNVIPLSSILAGTPAKPAAGGCSSKSCGSSKGPGDMPAEVWA
                     KVKDHPCYSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCANESRPGVTSEKLTPEMA
                     ARKVVAVANKVPQLSVLGVAGPGDAVFDWKRTLETFRLVEKQLPDIKFCISTNGLSLP
                     DHVDEIVAHNIDHVTVTINMIDPEIGAAIYPWIYFNGKRRTGIEASRILHERQMEGLA
                     ALTAKGVLVKVNSVMIPGINDAHLLDVNAEIKKHGAFLHNVLPLISDPAHGT"
BASE COUNT          483 a          915 c          794 g          335 t
ORIGIN      
        1 tgatctccgg caccggctcg taggacacca gccaatagcc gccctcggca tgccagcgcg
       61 cggtcaggaa gtcgctgaca tgctcggcgt cgccgatgtg gtaggcggcg gcctccaacg
      121 cctcgtcggc attgtccgcc acccggccca ggacttcggt gatgcggaac ggtttggcat
      181 cggttccggg aatggtggtc tgaacgacga cgagaggcat ggtcccctgc tcctggcgaa
      241 agtgtggcaa cggccctttc ctaggccctg gccggtttcc cgaagcttaa ttcctagccc
      301 ggccgaccat ctgcgcgcgg ccggaccacg atcggcgcat agacgaccac gaacagcagc
      361 caggccagcg cccacagggt gccgccggca tgggtcatgg caacctgcgc gtcggccagc
      421 ggcgccgcca cccgcagcac cgcccccagc gacagcagca cataggcggc cacgatccag
      481 cgcgacagca ccagcggccg gccggaatgg cccagggcgg cgcgggtcat caccccgatg
      541 atcatcgtgc cgatgcagcc cgccgtcagc gcgtgcaccg ccgccgacgg cggcagcgca
      601 tcgacgaagc tggacaggcc cagcagcgcc agcccgatca ccagccacag atagcccagg
      661 tgcagcaccc acaggatcgg attggacagc gtcttgatgc cgtgccagcg cgacatccgc
      721 agcaggtgca cggccgccgc cgccagcagg gcgatgcccg ccgccggcga cgtcggcgct
      781 accgcagcga agagaccggc caccagcacg attgcgaccg ccccgccctt ctcgatccag
      841 gcgatggagc ggacctcgac cgggcggccc tgcatggcca gccagttctg cgtgaaggac
      901 ggcacgatgc gcccgcccac caccgtgatc atcaccagca gcagcacaat gccggcatag
      961 acgccggtca tggcgtggcc cacgcccagc accaggtcca gatgcaccgc cgcattggca
     1021 acggtgaagg cggccaggat ggggacaaag gcgatgtttc gccacttgcc cgcgcggatc
     1081 agcggccccg ccatcatggc cgccagcagc ggcaggtaga cgaggtcggc cgccgccacc
     1141 gcccaggccg gaagcacgcc cgccagcgcg aaggccagcc gccccgccag ccaggcggcg
     1201 aacagcacca tcaggggccg gccgctgaca tgatgggtgt tggtccagtt gggcaccgcc
     1261 gtcagcaaaa agccgcccac cgccgccgcc gcgaagccga acaccatctc gtggccgtgc
     1321 cacacggccg gcggcatggt caggcccaag gtggcgccgc cggtccacac caccagccac
     1381 aacggcagca gcaacgccgc caacgccccg gccgacagaa agaagggccg gaagccggcg
     1441 gcgaagaaga ccgggccgga atcgccccgg tagaccggct cctgcaactg gatggtggcc
     1501 atgacactct cctggttctg gaatgatccc agaatggccg ccaagcctcg gccagacatt
     1561 gatgggggtc aaggggtgga tgtcggattg ccgacgtttc gtcgcatatg cgacagccaa
     1621 caatccagcc cgaaccaagg tttcctgcga cttttacagt tggcacgggc cttgctgatc
     1681 tagttgccgg tacgaccctg tacgaggagg ccgccggtga gcagcaacgt gatccccctc
     1741 tccagcattc ttgctgggac ccccgcgaag cccgctgccg gcggctgttc ctcgaagtcc
     1801 tgcgggtcgt ccaagggccc cggcgacatg ccggccgagg tgtgggccaa ggtcaaggac
     1861 cacccctgct acagcgagga agcccaccac tatttcgccc gcatgcatgt ggccgtggcg
     1921 cccgcctgca acatccagtg caactactgt aaccgcaagt acgattgcgc caacgaatcc
     1981 cgccccggcg tgacctccga gaagctgacg cccgagatgg cggcgcgcaa ggtggtggcg
     2041 gtcgccaaca aggtgccgca attgtcggtc ctgggcgtgg ccggccccgg cgacgcggtg
     2101 ttcgactgga agcgcacgct cgagaccttc cgcctggtcg agaagcaact gcccgacatc
     2161 aagttctgca tctcgaccaa cggcctgtcc ctgcccgacc acgtcgacga gatcgtcgcc
     2221 cacaacatcg accacgtcac cgtcaccatc aacatgatcg accccgaaat cggtgccgcg
     2281 atctatccct ggatctattt caacggcaag cgccgtaccg gcatcgaggc gtcgcgcatc
     2341 ctgcacgagc gccagatgga aggcctggcg gcgctgaccg ccaagggcgt gctggtcaag
     2401 gtcaactcgg tgatgatccc gggcatcaac gacgcccacc tgctggacgt caacgccgag
     2461 atcaagaagc acggcgcctt cctgcacaac gtgctgccgc tgatctcgga ccccgcgcac
     2521 ggcaccc
//
LOCUS       DATIKR010000223         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_221583, whole genome shotgun sequence.
ACCESSION   DATIKR010000223 DATIKR010000000
VERSION     DATIKR010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221583"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VLL76_03370"
     CDS             <1..213
                     /locus_tag="VLL76_03370"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28564.1"
                     /translation="IVLDVNMPGIDGIETARRMKTVCPTATVTLLTANIQEPVRLQAQ
                     ELGVCFMNKPFREDVLIGFLATGTVP"
     gene            210..848
                     /locus_tag="VLL76_03375"
     CDS             210..848
                     /locus_tag="VLL76_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheC"
                     /protein_id="HSV28565.1"
                     /translation="MTSAFIGEIERDAVTEILNVAIGQAAASLSQLVEDEVRLSVPFV
                     DFLSPVEAAQRLETETEGGDSVAVRQHFEGRFYGDILLIFPEQRSLDLVRHMLGDQVP
                     LDQLTELEQEALLEVGNIILNACLGSLANQLGMPVESSLPAYVRGRGAKILDLGAPKA
                     IAEGEELVMFLHVDFSLLTKDVHGYLAFVMDIISARHFVEAVGAYVNQRLGG"
     gene            863..>2118
                     /locus_tag="VLL76_03380"
     CDS             863..>2118
                     /locus_tag="VLL76_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV28566.1"
                     /translation="MAAPRPDELLLALTDASEIGLVLIAGDGRIVLWNAWMGRMSGIG
                     ADAALGSTLSGVFPDLEGSRIEQAVAQALETGMSAILSSSLNKKLFPLVHEARAPARN
                     EPMQQIVVVKPVLSDGRRACLVQVFDVTTMAHREALLRQQARTMEALAENYRLSELHN
                     RAIVDNTADAIVTFGEDGAIGTYNPAAERIFGYDPYEIVGKSVTVLIPDLGSKDGALA
                     IDDFLAERREVTGVRKIRATFPMELSVSAMKLGGQRLYVAIAHDITERKAAEAELKNQ
                     KEWLTTLINAMPDLVCFKDGKGRWLVANQFYLDLAGLNGLDYHGRTGYELARLSNGQG
                     EFLTATAETDERAWREGKPIAYEKVVRAADGSSKVFDVAKIPLFDTDASRKGLVLVGR
                     DITERKLAAARIQHLAHHDSLTGLPNR"
BASE COUNT          353 a          734 c          704 g          327 t
ORIGIN      
        1 atcgtgctcg acgtcaacat gcccggcatc gacggcatcg agacggcgcg ccgcatgaag
       61 acggtgtgcc cgaccgcgac cgtcaccctg ctgaccgcca acatccagga gccggtgcgc
      121 ctgcaggccc aggaattggg cgtgtgcttc atgaacaagc cgttccgcga ggacgtgctg
      181 atcggctttc tggccaccgg gaccgtgcca tgacctcggc cttcatcggt gagatcgagc
      241 gcgacgcggt caccgagatc ctcaacgtcg ccatcggcca ggccgccgcg tcgctgtcgc
      301 agctggtcga ggacgaggtg cggctgtcgg tccccttcgt cgatttcctc agcccggtcg
      361 aggccgccca gcgcctcgag accgagaccg agggcggcga ttcggtggcc gtgcgccagc
      421 atttcgaggg ccgcttctac ggcgacatcc tgctgatctt cccggaacag cgcagcctgg
      481 acctggtgcg ccacatgctg ggcgaccagg tgccgctgga ccagttgacc gaactggagc
      541 aggaggcgct gctggaggtc ggcaacatca tcctcaacgc ctgcctgggg tcgctggcga
      601 accagttggg catgccggtg gaaagctcgc tgcccgccta tgtgcgcggg cgcggcgcca
      661 agatcctgga cctgggcgcg cccaaggcca tcgccgaggg cgaggagctg gtgatgttcc
      721 tgcacgtgga cttctcgctg ctgacgaagg acgtgcacgg ctacctggcc ttcgtgatgg
      781 acatcatctc ggcacgccac ttcgtcgagg cggtgggagc ctacgtcaac cagcgcctgg
      841 gcggctgacg gaggatttca ccatggccgc cccccggccc gacgaactcc tcctcgccct
      901 gaccgacgcc agcgagatcg gcctggtgct gatcgccggc gacggccgca tcgtgctgtg
      961 gaacgcctgg atgggccgca tgtcgggcat cggcgccgac gcggccctgg gctcgacgct
     1021 gtccggcgtg tttccggacc tggaaggctc gcgcatcgag caggcggtgg cgcaggcgct
     1081 ggaaaccggc atgtcggcca tcctgtcgtc gtcgctgaac aagaagctgt ttccgctggt
     1141 gcacgaggcc cgcgcgccgg cccgcaacga gcccatgcag cagatcgtgg tggtcaagcc
     1201 ggtgctgtcc gatggacggc gggcctgcct ggtgcaggtg ttcgacgtca ccaccatggc
     1261 ccaccgcgag gcgctgctgc gccagcaggc ccgcaccatg gaggcgctgg ccgagaatta
     1321 ccgcctgtcc gagctgcaca accgcgccat cgtcgacaac accgccgacg ccatcgtcac
     1381 cttcggcgag gacggcgcca tcggcaccta caacccggcg gccgagcgca tcttcggcta
     1441 tgacccgtac gagatcgtcg gcaagtcggt caccgtgctg atccccgatc tgggcagcaa
     1501 ggacggcgcc ctggccatcg acgacttcct ggctgagcgc cgcgaggtca ccggcgtgcg
     1561 caagatccgc gccaccttcc cgatggaatt gtcggtcagc gccatgaagt tgggcggcca
     1621 gcgcctgtac gtcgccatcg cccacgacat caccgagcgc aaggcggcgg aagccgagct
     1681 gaagaaccag aaggaatggc tgaccaccct gatcaacgcc atgcccgatc tggtctgctt
     1741 caaggacggc aagggccgct ggctggtcgc caaccagttc tacctggatc tcgccgggct
     1801 gaacggcctg gattaccacg gccgcaccgg ctacgaactg gcgcggctgt ccaacggcca
     1861 gggcgagttc ctgaccgcca ccgccgagac cgacgagcgc gcctggcgcg agggcaagcc
     1921 catcgcctat gaaaaggtgg tgcgcgccgc cgacggctcg agcaaggtgt tcgatgtcgc
     1981 caagatcccg ctgttcgaca ccgatgccag ccgcaagggc ctggtgcttg tcggccgcga
     2041 catcaccgag cgcaagctgg cggcggcccg catccagcat ctggcgcacc acgattcgct
     2101 gaccggcctg cccaaccg
//
LOCUS       DATIKR010000224         3292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_197013, whole genome shotgun sequence.
ACCESSION   DATIKR010000224 DATIKR010000000
VERSION     DATIKR010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197013"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VLL76_03385"
     CDS             <1..751
                     /locus_tag="VLL76_03385"
                     /inference="COORDINATES: protein motif:HMM:NF021010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HSV28567.1"
                     /translation="WSSNWDKEKGQPKFMFDPTRTGRAANRWDDLSSGKVGQGDVYYL
                     SDETKAAFDPNHPWQDGDVLPGRVLRPYEGSEADIRTLGKGEWKDGHWEVTLSRLMDT
                     GDTRHDKAFRDSGLYNLAFAIHRHATGLRWHYVSLPATMGLGRSPADFNAIRFDGDTP
                     VWDQPWHAVTLFYPGQVSWSLLTSNRHPGKPMIERGVPVRSYHKEEQLARYGIEIEFV
                     DEIRKQWLKTLAAGLFLLAGLGFGLVRLQAK"
     gene            772..1341
                     /locus_tag="VLL76_03390"
     CDS             772..1341
                     /locus_tag="VLL76_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HSV28568.1"
                     /translation="MAPYHHIAVHFPVALLGIAFLVLMLRGTTRNDRVERLEGLAIVP
                     LLSIGIAGAVAAQVTGLLIWPLDAALTSTMGRNKLLMASWLVATWALVLILRILAGPA
                     IWNGRGRIVLLGLGAFGAFLLATVGSLGGHLLGAPSRLSDLLHQLGWSVYQTFYAPDP
                     VLTAMVAVGAAAIVVGLLVPGASSHKETR"
     gene            1338..1979
                     /locus_tag="VLL76_03395"
     CDS             1338..1979
                     /locus_tag="VLL76_03395"
                     /inference="COORDINATES: protein motif:HMM:NF040005.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6134 family protein"
                     /protein_id="HSV28569.1"
                     /translation="MKIAIHALAALTLLLGAAADAEPRPDHAESFTVLRNGDPVGSHT
                     IEIRPGEAGTTVDIATNVVVKIAMIPVYRFEHRGSERWRDGRLLAMSSQTNDDGTRHS
                     LDVRDTGNDVLDVVGDGQRNSVGGAIVPASLWNRATVAQTILLNTLDGRRMAVTVQDL
                     GSEAVMVRGQARPARHYSLTGELQRELWYDESGLLVQVAFKGRDDSDIRYVLR"
     gene            2042..2617
                     /locus_tag="VLL76_03400"
     CDS             2042..2617
                     /locus_tag="VLL76_03400"
                     /inference="COORDINATES: protein motif:HMM:NF023682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermostable hemolysin"
                     /protein_id="HSV28570.1"
                     /translation="MTLVVADPDHPLRGSLEDAIRAVFLAEYGARVPAFPRQLLALLD
                     RESRPLAASGLRFAEDGFFSECYLEEPVEESLGRRAGTAVSRTEVVEFVSLAALRPGA
                     ALPLVGGAVRLCLASGCRWGLFTATARLRALLGRAGFVVEDIAAADRERVTRPENWGS
                     YYLHDPRVVAVRAESLPRVLNSAPNRTAAHA"
     gene            2610..>3292
                     /locus_tag="VLL76_03405"
     CDS             2610..>3292
                     /locus_tag="VLL76_03405"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV28571.1"
                     /translation="MREVIDALFRHAESSPDRLAVVTEDAQIGYGALARKVIAMAAAL
                     SQAPRIVASMMPRTADWIATDLALAMLGRTVVPLPEFFSPGQLSHVLADSGAGAVIAT
                     HETVGRAASLGWPVLIPHPADGGRRPARGGSRRIIYTSGTTGCPKGVVLGECQLSASL
                     TGLAQAVNPSPDDRHLSVLPFSLLLEQVCGLYLPLLSGAAIFLCPDPQRLPAAAEWWR
                     PTTTVLVPE"
BASE COUNT          506 a         1099 c         1103 g          584 t
ORIGIN      
        1 ctggtccagt aactgggaca aggaaaaggg ccagcccaaa ttcatgttcg accccacccg
       61 caccggccgg gcggcgaacc gatgggacga cctttccagc ggcaaggtcg gacaggggga
      121 cgtctattac ctgtccgacg agaccaaggc ggcgttcgac cccaaccatc cttggcagga
      181 tggcgacgtt ctgccgggcc gggtgttgcg gccatacgaa ggcagcgagg cggacatccg
      241 aacgctcggc aagggtgaat ggaaggatgg ccattgggaa gtcacgctgt cgcgcctgat
      301 ggacaccggc gacacgcggc atgacaaggc gttccgggat agcggactgt ataaccttgc
      361 cttcgccatc catcgccatg ccaccggcct gcgttggcac tacgtgtcgc tgccggcgac
      421 catgggcctg ggccgttccc ccgccgattt caacgcgatc cgcttcgacg gcgacacccc
      481 cgtgtgggat cagccctggc acgcggtcac gctgttctat ccgggccagg tcagttggtc
      541 gctgctgacc agcaatcgcc atcccggcaa gccgatgatc gagcgcggcg tccccgtccg
      601 cagctatcac aaggaagagc agcttgcccg ctacggtata gaaatcgagt tcgtcgacga
      661 gatccgcaag cagtggctga agactctggc cgccggtctg ttcctgttgg ccgggctcgg
      721 gttcggcctt gtccgcctgc aggcgaagtg acgcgcgcga ggagagagta agtggcaccc
      781 tatcatcata tcgccgtcca ttttccggtg gcccttctcg ggatcgcctt ccttgtgctc
      841 atgctgcgcg gaacgacgcg gaacgacagg gtcgaacggc tggaaggtct ggccatcgta
      901 ccactgctgt ccatcgggat agccggggcc gtcgccgccc aggttaccgg attgctgatc
      961 tggccgttgg acgcggccct cacttcgacc atggggcgca acaagctgct gatggcctct
     1021 tggctggtcg ccacctgggc gcttgtgctg atcctgcgca tcctggccgg cccggcgatc
     1081 tggaatggcc ggggccgcat cgtcctactt ggactgggcg cgttcggcgc cttccttctg
     1141 gcgaccgtgg gctctctcgg cggccatctg ctgggcgccc cgtcccggct ttccgacctg
     1201 cttcaccagt tgggttggag cgtctaccag accttttacg cgcccgaccc ggtgctgacc
     1261 gccatggtgg cggtgggtgc ggccgccatc gtggtcggcc tgctcgtgcc aggcgcctcc
     1321 agccacaagg agacgagatg aaaatcgcga ttcatgccct tgccgccctg accttgcttc
     1381 tgggggcggc ggcggacgcc gagcctcggc cagaccacgc agaatccttc acggtgctgc
     1441 gcaacggcga cccggtgggg agtcacacca tcgaaatccg cccgggcgaa gccgggacga
     1501 cggtcgatat cgcgaccaac gtggtggtga agattgccat gatcccggtt taccgctttg
     1561 aacaccgggg gagcgagcgg tggcgggatg gacgcctgtt ggcaatgtcc tcacaaacga
     1621 atgacgatgg cacccggcac agtctcgacg tgcgcgacac aggcaacgac gtcctggatg
     1681 tcgtcggcga tggccagcgc aactctgtcg gcggggccat cgtgcctgcc agcctgtgga
     1741 accgcgccac cgtcgcccag acaatcctcc tcaacacgct ggatgggcgg cgcatggcgg
     1801 tgacggtcca ggacctgggc agcgaagcgg tcatggtccg ggggcaggcg cgcccggcgc
     1861 gccactattc gttgaccgga gagttgcagc gcgagctctg gtacgacgaa tccggtctgc
     1921 tggtgcaggt ggcgttcaag ggcagggacg attcggacat tcgctacgtc ctccggtgac
     1981 ggggcgtaag gatggcgtca gccgataatg gcacgttctg ccaacgaaag gcaggtgaac
     2041 gatgaccctg gtagtggcag accccgacca ccccctgcgc ggcagcctgg aagacgccat
     2101 ccgcgccgtg ttcctggccg aatacggcgc cagggtgccg gcctttccgc gccagttgct
     2161 ggcgctgctc gatcgggagt cgcggccgct tgccgcctcc ggtctccgct tcgccgagga
     2221 tggcttcttc tcggaatgct atctggagga accggtggag gaaagccttg gccggcgggc
     2281 aggaacggcc gtgagccgta ccgaggtggt cgagttcgtc agcttggcgg ctctgcggcc
     2341 gggcgccgcg cttcccttgg tcggcggtgc ggtgcggctg tgtctggcct cgggctgccg
     2401 ctggggcctg ttcaccgcca ccgcgcgcct gcgggccttg ctgggccgtg cggggttcgt
     2461 ggtcgaagac atcgccgccg ccgaccggga acgtgtcacc cggcccgaga actggggcag
     2521 ctattacctg cacgacccgc gcgtagtggc ggtccgggcg gaatcgttgc cccgcgtgct
     2581 taattcggct cccaatcgga ccgccgctca tgcgtgaggt gatcgacgcc ctgttccggc
     2641 acgccgaatc cagtcccgac cggctggcgg tggtcaccga ggacgcccaa atcggatacg
     2701 gcgccctggc ccgcaaagtc atcgccatgg ccgccgcact gagccaagcc ccccggattg
     2761 tcgcatcgat gatgccgcgc accgccgact ggatcgcgac cgacctcgca ttggccatgc
     2821 tggggcgcac cgtggtgccc ctgcccgaat ttttttcccc cggccagttg tcccacgtgc
     2881 tggccgattc cggtgccggt gccgtgatag cgactcatga aacggtggga cgcgccgcgt
     2941 ctctgggctg gcccgtcctg attccccacc ccgccgatgg cggaaggcgc cccgcgcgcg
     3001 gcgggtcgcg gcggatcatc tacacctcgg gtactaccgg gtgcccgaaa ggggtggtgc
     3061 tgggcgaatg ccagctttcc gccagcctga cggggcttgc ccaggctgtg aaccccagcc
     3121 cggacgaccg ccacctctcg gtgctgccgt tctcgctgtt gctggaacaa gtctgcggcc
     3181 tctacctgcc actcctgtcc ggggcggcca tcttcctgtg cccggatccc cagcggctgc
     3241 cggccgcggc ggaatggtgg cggcccacca ccaccgtcct ggttcccgaa tt
//
LOCUS       DATIKR010000225         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_124544, whole genome shotgun sequence.
ACCESSION   DATIKR010000225 DATIKR010000000
VERSION     DATIKR010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124544"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VLL76_03410"
     CDS             <1..350
                     /locus_tag="VLL76_03410"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HSV28572.1"
                     /translation="IRVSMFIEADPRQLDASKAIGAPVVELHTGAYCDHEGEARDREL
                     ARIVTAAAHAADIGLECHAGHGLSFDTVKPIAAIGSIMELNIGHFLVGEAIFVGLEAS
                     IRHMRRLMDEARK"
     gene            347..769
                     /gene="acpS"
                     /locus_tag="VLL76_03415"
     CDS             347..769
                     /gene="acpS"
                     /locus_tag="VLL76_03415"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HSV28573.1"
                     /translation="MILGIGNDLCDIRRIERILDRFGDRFVERVFTDPERAKADCGTS
                     QFRAATYAKRFAAKEACAKALGTGFQYGVFLKDIGVVNTESGQPTLHLTGGAAERLKA
                     LTPAGMEARIHLTMTDEHPLAEAVVIISAVPAACSERP"
     gene            865..1665
                     /gene="lepB"
                     /locus_tag="VLL76_03420"
     CDS             865..1665
                     /gene="lepB"
                     /locus_tag="VLL76_03420"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HSV28574.1"
                     /translation="MSRGKPSGTWETIKTVLYAMLIAGGIRTVAFEPFNIPSGSMIPT
                     LLIGDYLFVSKYAYGYSRHSVPFSVGPASDQRLFGEMPERGDVVVFKVRQPKTDAYGR
                     LILDAQGKPVRELVDYIKRVIGLPGDRIQVTNGILHINGEAVKRERIEDFVERDRDGN
                     FLRAPQFVETLPGGRQHRIIEFMGDNGQADNTEEFVVPAGHVFMMGDNRDNSKDSRYL
                     DEVGYVPVENLVGRAEMLFFSGDGSAALWEVWKWPWAIRFSRLFGGIE"
     gene            1667..>2042
                     /locus_tag="VLL76_03425"
     CDS             1667..>2042
                     /locus_tag="VLL76_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III domain-containing protein"
                     /protein_id="HSV28575.1"
                     /translation="MAELAATLGHQFARPELLAEALTHPSIVQGRAPRKATPYERLEF
                     LGDRVLGLVVADMLFHAFPHEAEGALARRHAALVRRESLARIAGEMGLPAHIQMAKGE
                     DEAGGRSNPALLADCCEAVIGAL"
BASE COUNT          345 a          679 c          666 g          352 t
ORIGIN      
        1 gcatccgcgt ctccatgttc atcgaggccg acccgcgcca gctcgacgcc tccaaggcca
       61 tcggtgcgcc ggtggtggaa ctgcataccg gcgcctattg cgaccatgag ggcgaggcgc
      121 gcgaccggga actggcgcgc atcgtcacgg cagccgccca tgccgccgac atcggcctgg
      181 aatgccacgc cggccacggc ctgtcgttcg acaccgtcaa gccgatcgcc gccattgggt
      241 cgatcatgga actcaacatc ggccatttcc tggtgggcga ggccatcttc gtcggcctgg
      301 aggcatcgat ccgccacatg cgccgtttga tggacgaggc ccgcaagtga tcctggggat
      361 cggcaacgat ttgtgcgaca tccggcgcat cgaacggata cttgaccggt tcggcgaccg
      421 cttcgtcgaa cgcgtcttca ccgatcccga gcgcgccaag gccgattgcg gcacgtccca
      481 atttcgggcc gccacctacg ccaagcgctt cgccgccaag gaggcctgtg ccaaggcttt
      541 gggcaccggt ttccaatacg gcgtcttcct caaggacatc ggggtcgtca acacggagag
      601 cggccagccg accctgcatc tgaccggcgg tgcggccgaa aggctgaagg cgcttacccc
      661 ggccggcatg gaagcgcgca tccatctgac catgaccgac gaacatcccc tggccgaggc
      721 ggtggtgatc atctcggccg ttccggcggc atgttccgag cggccttgac agcgggcggc
      781 tgggctggtt tgttcacccc gtcccgccgc cgatgcggca atcgacatat tcatttaaca
      841 ccaaacggtt aggcggacat tctcatgtcg agaggtaagc ccagcggcac ctgggaaacg
      901 atcaagacgg ttctttacgc catgctcatc gctggcggca tccgcaccgt cgcgttcgag
      961 cccttcaaca ttccctcggg atccatgatc ccgacgctgc tgatcggcga ctaccttttc
     1021 gtgtcgaaat acgcctacgg ctattcgcgt cattcggtac cgttcagcgt ggggccggca
     1081 tccgaccaac gcctgttcgg cgaaatgccc gagcgcggcg acgtggtggt gttcaaggtg
     1141 cgccagccca agaccgacgc ctacggccgc ctgatcctgg acgcccaggg caagccggtg
     1201 cgcgaattgg tggattacat caagcgggtg atcggcctgc cgggcgaccg catccaggtg
     1261 accaacggca tcctccacat caacggcgag gcggtgaagc gcgagcgcat cgaggatttc
     1321 gtcgagcgtg accgcgacgg caacttcctg cgcgcgccgc aattcgtcga gacgctgccg
     1381 ggcggccgcc agcaccgcat catcgagttc atgggcgaca acggccaggc cgacaacacc
     1441 gaggaattcg tcgtccccgc aggccacgtc ttcatgatgg gcgacaaccg cgacaattcg
     1501 aaggattcgc gctacctgga cgaggtcggc tacgtgccgg tcgaaaacct ggttggccgt
     1561 gccgagatgc tgttcttctc gggcgacggc tcggcggcgc tgtgggaagt gtggaagtgg
     1621 ccgtgggcca tccgcttttc ccgcctgttc ggcgggatcg agtgacatgg ccgaacttgc
     1681 cgcgacgctg ggccaccagt tcgcccggcc ggaattgctg gccgaggcgc tgacccatcc
     1741 gtccatcgtc cagggccgcg cgccgcgcaa ggcgacgccc tacgagcggt tggaattcct
     1801 gggcgaccgc gtgctgggcc tggtggtcgc ggacatgttg ttccacgcct ttccgcacga
     1861 agccgagggc gcgctggccc gccgccatgc cgccctggtc cgccgtgaat cgctggcccg
     1921 catcgccggc gagatggggc tgcccgccca tatccagatg gcgaagggcg aggatgaagc
     1981 gggcgggcgc tcgaatccgg cgctgctggc cgattgctgc gaggcggtga tcggggcgct
     2041 gt
//
LOCUS       DATIKR010000226         2568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_76459, whole genome shotgun sequence.
ACCESSION   DATIKR010000226 DATIKR010000000
VERSION     DATIKR010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76459"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..1388)
                     /locus_tag="VLL76_03430"
     CDS             complement(51..1388)
                     /locus_tag="VLL76_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSV28576.1"
                     /translation="MTRAIEAFFVRHRDRLVWLHAAMAVVFVCVIVVPVFLPDPPGDA
                     TPLTHWTTFANFALWGLWFPLVFLSVIVTGRSWCGLLCPMGAAAEWANRKGPQRAIPG
                     WLRWEGTPVVSFLVVTILGQTVGVRDHPEAALEVFGGTLLAAIALGWLYGRKKRAWCR
                     HACPIGLLLGVFSRLGAVQFAPRIKREGGDTWTEKGVCPTMIDLSRKEESRHCIECFR
                     CVNPQAKGAVELRLRPPGREVEDIAGHNPNAAEVWFLFLGSGVAVGGFLWLVLPLFQE
                     LRQAFGVWAIEHDALWLAEPGPWWLMSNHPDRREVFLGLDFLLIVGFMAGVMAALTTV
                     LAGLTALAAVLARGTLPFRRRFVELGYQYAPVSMVSLVVGLGGTLFVPLGAWAGAAKG
                     VLFLLGIAWSLRLGWRILARQGITGPARITALAPGLVGTSMVALAWWPAIFGL"
     gene            complement(1385..>2568)
                     /locus_tag="VLL76_03435"
     CDS             complement(1385..>2568)
                     /locus_tag="VLL76_03435"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HSV28577.1"
                     /translation="RRVRGEPMIRRLLLALALLLPALPAWAHGVDMKAVAAELSAKGD
                     ALVAAYEPGNGTDGAFSDLYFDVFEGSGMEEAIALDSPQTKAELESLFSDVIGKAGQK
                     RPKAEIAAAWRSLDQRLHEVADARAAPRTGALAAFLQSFLILLREGFEAMLVVTALAA
                     YLRRAGEPGKVKVIWQGVAAALAASLATAWLLAGVLDVSGKDQEVLEGAVMLVAAAVL
                     FYVSFWLLSKREAATWHNYVKTQVEAAASGGKLWALALAAFLAVYREGAETVLFYQAL
                     SLSAPGQMPALLGGFAAGAAALAALYAAMRALSFRLPIKLFFTATAALLFFLAVTFAG
                     TGVLELQEGRLLPITPLAFVPRVEWLGLFPTAETVAAQLALLLPMAVALGWHYRRKGA
                     R"
BASE COUNT          445 a          908 c          923 g          292 t
ORIGIN      
        1 cgggcccctc cctctcccgc aagcgggcga gggcaagagg gggcgtcaaa ttacagcccg
       61 aagatcgccg gccaccacgc cagagccacc atcgaggtgc cgaccagccc gggcgcaagt
      121 gccgtgatgc gggcggggcc ggtgatgccc tggcgggcca ggatgcgcca gcccaggcgc
      181 aggctccagg cgatgcccag caggaacagc acgcccttgg cggcgccggc ccaggcgccc
      241 agcggcacga acagggtgcc gcccaggccg accaccagcg agaccatgga gaccggggcg
      301 tattgatagc ccagctcgac gaagcggcgg cggaagggca gggtgccgcg cgccaagacc
      361 gccgccagcg cggtcagccc ggcgagcacc gtggtcagcg ccgccatcac gccggccatg
      421 aagccgacga tcagcaggaa gtcgagcccc agaaacactt cgcggcggtc ggggtggttg
      481 ctcatcagcc accacggccc aggctcggcc agccacaggg cgtcgtgctc gatggcccac
      541 acgccgaagg cctggcgcaa ttcctggaac agcggcagca ccagccacag gaagccaccc
      601 accgccacgc cggagcccag gaacaggaac cacacctcgg cggcgttggg gttgtggccg
      661 gcgatgtcct cgacctcgcg gccgggcggg cgcagccgca actcgacggc gcccttggcc
      721 tgcgggttga cgcagcggaa gcattcgatg cagtggcggc tttcttcctt gcgcgacagg
      781 tcgatcatgg tcgggcagac gcccttttcc gtccacgtgt cgccgccctc gcgcttgatc
      841 ctgggggcga actggacggc gcccaggcgc gagaacacgc ccagcagcag gccgatgggg
      901 caggcgtggc ggcaccaggc gcgcttcttg cggccgtaca gccagcccag cgcgatggcg
      961 gccagcaggg tgccgccgaa cacctccagc gccgcttcgg gatggtcgcg cacgccgacg
     1021 gtctggccca ggatggtgac gaccaggaag ctgacgacgg gcgtgccctc ccagcgcagc
     1081 cagcccggga tggcgcgctg cggccccttc ctgttggccc attcggcggc ggcgcccatg
     1141 gggcacagca aaccgcacca cgagcggccg gtgacgatca ccgacaggaa caccagcggg
     1201 aaccacaggc cccacagggc gaagttggcg aaggtggtcc agtgggtcag cggggtggcg
     1261 tcgcccggcg ggtcgggcag gaacaccggc accacgatca cgcacacgaa cacgaccgcc
     1321 atggcggcgt gcagccagac caggcggtcg cggtggcgga cgaagaaggc ctcgatggcc
     1381 cgcgtcatcg cgcccccttg cgccggtaat gccagcccaa agccaccgcc atgggcagca
     1441 gcagcgccaa ttgggccgcc accgtctcgg cggtggggaa caggcccagc cattcgacgc
     1501 gcggcacgaa ggccaagggc gtgatgggca gcagcctgcc ttcctgcagt tccagcacgc
     1561 cggtgccggc gaaggtcacc gccaggaaga acagcagggc ggcggtggcg gtgaagaaca
     1621 gcttgatcgg caggcggaag gacagcgccc gcatggcggc gtacagggcg gccagcgccg
     1681 ccgcgccggc cgcgaagccg cccagcaggg ccggcatctg gcccggcgcc gacaggctga
     1741 gggcttggta gaacagcacc gtctcggcgc cctcgcgata gaccgccagg aaggcggcca
     1801 gggccagcgc ccacagcttg ccgcccgagg cggcggcctc gacctgggtc ttcacgtaat
     1861 tgtgccaggt ggcggcctcg cgcttggaca gcagccagaa gctgacatag aacagcacgg
     1921 cggcggccac cagcatcacg gcgccttcca gcacctcctg gtccttgccc gagacgtcga
     1981 gcacgccggc cagcagccag gcggtggcga ggctggcggc caaggcggcg gcgacgccct
     2041 gccagatcac cttgaccttg cccggctcgc cggcgcggcg cagataggcg gccagggcgg
     2101 tcaccaccag catggcctcg aagccctcgc gcagcaggat caggaaggat tgcaggaagg
     2161 ccgccagggc gccggtgcgc ggtgccgccc gggcatcggc gacctcgtgc aggcgctggt
     2221 cgagactccg ccacgccgcg gcgatttccg cctttgggcg tttctgcccg gccttgccga
     2281 tgacgtccga gaacaggctt tccagctcgg ccttggtctg cggcgaatcc agcgcgatgg
     2341 cctcctccat gcccgagcct tcgaacacgt cgaaatacag gtccgagaag gcgccgtcgg
     2401 tgccgttgcc gggttcatag gcggcgacca gggcatcgcc cttggccgac aattcggcgg
     2461 cgacggcctt catgtcgacg ccatgggccc aggcgggcag ggcgggcagc agcagggcca
     2521 gggccagcag caggcggcgg atcattggtt caccgcgaac acgtcggg
//
LOCUS       DATIKR010000227         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_76460, whole genome shotgun sequence.
ACCESSION   DATIKR010000227 DATIKR010000000
VERSION     DATIKR010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76460"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /gene="rpoN"
                     /locus_tag="VLL76_03440"
     CDS             <1..762
                     /gene="rpoN"
                     /locus_tag="VLL76_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HSV28578.1"
                     /translation="DLAGLMKVCGIDAEDLAEMVGEIKALDPKPALRFDHAVTQAITP
                     DVLMRRAQDGSWHVELNSDTLPRVLVNTRYYAKVSVATRNKDEKSYLSERFQSANWLV
                     KSLHQRATTILKVASELVRQQDAFFRHGVAHLRPLVLRDIANAIGMHESTVSRVTSNK
                     YIATPRGIFELKYFFTQAIGSADGGDAHSAESVRHRIKALIDAEGKDVLSDDRLVEIL
                     KSEGIDIARRTVAKYREAMNIPSSVQRRREKSLGV"
     gene            963..1427
                     /gene="ptsN"
                     /locus_tag="VLL76_03445"
     CDS             963..1427
                     /gene="ptsN"
                     /locus_tag="VLL76_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HSV28579.1"
                     /translation="MDIADLITPAAVIPNLRATSKKQALQDLARRAAELTGLHERAIF
                     DVLLERERLGTTGVGNGIAIPHGKLNSLDRLYGLFARLERPIGFESIDEQPVDLIFLL
                     LAPESAGADHLKALARVSRLLRDKSVCEKLRGTDNADGLYALLTESPASRAA"
     gene            1482..>1797
                     /locus_tag="VLL76_03450"
     CDS             1482..>1797
                     /locus_tag="VLL76_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV28580.1"
                     /translation="MRTLYHHPICPFSRLVRVVLAEKKLDFEAHVERYWERRAEFVAL
                     NPASDVPVLVDDGGNGFCDAVAIAEYLDETHPEPPLLAADPAARAEVRRLIGWFGGKF
                     NKE"
BASE COUNT          325 a          604 c          571 g          297 t
ORIGIN      
        1 gacctggccg ggctgatgaa ggtgtgcggc atcgatgccg aggatttggc cgagatggtt
       61 ggcgagatca aggcgctgga ccccaagccg gcgctccggt tcgaccacgc cgtcacccag
      121 gccatcaccc ccgacgtgct gatgcgccgc gcccaggacg gctcgtggca tgtggagctg
      181 aattccgaca ccctgccgcg cgtcctggtc aacacccgct attatgccaa ggtgtccgtc
      241 gcgacccgta acaaggacga gaaatcctat ctgtcggaac gcttccaatc ggccaattgg
      301 ctggtcaagt cgctgcacca gcgcgccacc accatcctca aggtggcttc cgaactggtg
      361 cgccagcagg acgcgttctt ccgccacggc gtcgcccacc tgcggccgct ggtgctgcgc
      421 gacatcgcca atgccatcgg catgcacgaa agcaccgtca gccgggtgac ctcgaacaag
      481 tacatcgcga ccccgcgcgg catcttcgag ctgaaatatt tcttcaccca ggccatcggc
      541 tcggccgacg gtggcgacgc ccattccgcc gaatcggtgc gccaccgcat caaggcgctg
      601 atcgacgccg agggcaagga tgtgctgtcc gacgaccgcc tggtcgagat cctcaaatcc
      661 gaaggaatcg acatcgcacg ccggacagtg gcaaagtacc gcgaagccat gaacattccg
      721 tcgtcggtcc agcgccggcg cgagaaatca cttggggtat agcgtgttat aaatggggca
      781 ggcggatacc cgcccggccg gggcgcttga ctccagagag ggtgggaact atgttccggc
      841 cctcccttgg aacggtccgg tggggatggg ttagtggacc tgacacgaga ccgacttggt
      901 ggatgggcga agggcgggaa aggtactccc ggcggcccga tccgcggata gagggttact
      961 tcatggacat tgccgacctc atcactccgg ctgccgtcat cccgaacctg cgcgcgactt
     1021 cgaagaagca ggcgctgcag gatctggcgc ggcgcgcggc cgagttgacc ggactgcacg
     1081 agcgcgccat cttcgacgtc ctgctggagc gcgagcgcct cggcaccacc ggcgtcggca
     1141 acggcatcgc catcccgcat ggcaagctca attcgctcga ccgcctgtac ggcctgttcg
     1201 cgcggctgga acggccgatc ggcttcgaat ccatcgacga gcagccggtc gacctgatct
     1261 tcctgctgct ggcccccgaa tcggccggcg ccgaccatct caaggctttg gcgcgggtgt
     1321 cgcggctgct gcgcgacaag agcgtgtgcg aaaagctgcg cggcaccgac aatgccgacg
     1381 gcctgtacgc gctgctgacc gaatcgccgg ccagccgggc ggcgtgacat cgggtcacca
     1441 ccccctgttc ccgcactgca aaaagagtta gaaagggccg catgaggacc ctttaccacc
     1501 atcccatctg ccccttctcg cgcctcgtgc gtgtcgttct ggccgagaag aagctggatt
     1561 tcgaagccca tgtcgaacgc tattgggagc gccgcgccga gttcgtggcg ctgaacccgg
     1621 cgtccgacgt gcccgtgttg gtcgacgacg gcggcaacgg cttttgcgac gccgtcgcca
     1681 tcgccgaata cctggacgag acccatcccg agccgccgct gctggccgcc gacccggccg
     1741 cccgcgccga ggtgcgccgc ctgatcggct ggttcggtgg caagttcaac aaggaag
//
LOCUS       DATIKR010000228         1760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_124578, whole genome shotgun sequence.
ACCESSION   DATIKR010000228 DATIKR010000000
VERSION     DATIKR010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124578"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..949
                     /locus_tag="VLL76_03455"
     CDS             <1..949
                     /locus_tag="VLL76_03455"
                     /inference="COORDINATES: protein motif:HMM:NF039184.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dATP/dGTP diphosphohydrolase domain-containing
                     protein"
                     /protein_id="HSV28581.1"
                     /translation="VDFCRETIQAELGQVVNRAARRNQELAARLQEAERQITLLLNRQ
                     GYQARIIDQQAAILAALPPAITTDHMREIRDKVQILESWRASAEPRQGRHNHDIALLN
                     SRHAEYEKTLGGTVDANRKILAEVQGRVEKVGANLADTVAVLNVRDKEVRDKIQDLSK
                     AVATVVAWIPNAHKDRTSIPEAPGQTLVEEFRAKCDNAEKASQGEADPTGKAASEPGA
                     KLDAGKPDADLLLDFGRALIEVAKVCTYGAKKYSRGGWQHVTDGPCRYTSAMIRHLTT
                     GRMEAVDRESGLLHDAQVAWNALARLELRLRQASKDACP"
     gene            1134..1631
                     /locus_tag="VLL76_03460"
     CDS             1134..1631
                     /locus_tag="VLL76_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019658931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28582.1"
                     /translation="MLIAVDPGPTESAWCTFYDGRPIRWAKEPTTLVRDRLRDDFTLP
                     VYIEMIASYGMAVGREVFDTCTWIGRMEQVVEDRGGQAHRVFRIDVKTHLCKRPNAND
                     SNIRQALIDRFGPGKELAIGVKKRPGPLYGMAGDCWAALAVAVTAWDRLQTGQPACMP
                     RALYD"
BASE COUNT          345 a          655 c          556 g          204 t
ORIGIN      
        1 cgtcgacttc tgccgcgaga cgatccaggc cgaactcggc caggtcgtga accgcgccgc
       61 ccgacgcaac caggaactcg ccgcacgcct ccaggaggcc gaacggcaga tcaccctcct
      121 gctcaaccgg caaggctacc aagcccggat catcgaccag caggccgcca tcctcgccgc
      181 cctcccgccc gcgatcacca ccgaccacat gcgggagatc cgcgacaagg tccagatcct
      241 cgaatcctgg cgggccagcg ccgagcccag gcagggccgg cacaaccacg atatcgccct
      301 actgaacagc cggcacgccg aatacgagaa gaccctcggc ggcaccgtcg acgcgaaccg
      361 gaagatcctg gcagaggtcc agggccgggt cgagaaggtc ggcgccaacc tggccgacac
      421 cgtggcggtg ctgaacgtcc gcgacaagga ggtccgggac aagatccaag acctaagcaa
      481 ggcggtggcg accgtggtcg cctggatccc caatgcccac aaggaccgca catccatccc
      541 cgaggcccca ggccagaccc tggtcgagga attccgcgcc aaatgcgaca atgcggagaa
      601 ggcatcccag ggcgaggccg accccaccgg caaggccgcc agcgagcccg gcgccaagct
      661 cgatgccggc aagcccgacg ccgacctgct cctggacttc ggccgggccc tgatcgaggt
      721 cgccaaggtc tgcacctacg gcgccaagaa atacagccgg ggaggctggc agcacgtcac
      781 cgacggcccg tgccgctaca cctcggcgat gatccggcac ctgaccacag gccgcatgga
      841 agccgtggac cgcgagagcg ggctgctgca cgatgcccag gtcgcctgga acgccctcgc
      901 ccgcctggaa ctgcgcctgc gccaggcgag caaggatgct tgcccatgac ggccgagccg
      961 accacaatgg gcgtcgtgct ggtgtacggg ggcgcccagc ggcccctgga gcccgatcct
     1021 gcccaggaac agccgccagc gcccgccaga cctatgcccg tgggctggcg ccaccggcca
     1081 gagtaccgac gccggcaccg ccaggcctgc atcgatgccg ccaggagaac gacatgctga
     1141 tcgccgtcga ccccggcccg accgagagcg cctggtgcac gttctacgac ggcaggccca
     1201 tccgctgggc gaaggagccg accaccctgg tgcgggaccg cctgcgcgac gacttcaccc
     1261 tgccggtcta catcgagatg atcgcctcct acggcatggc cgtcggacgc gaggtcttcg
     1321 acacctgcac ctggataggc cgcatggagc aggtcgtgga agaccgtgga ggccaggcgc
     1381 accgcgtctt ccgcatcgac gtgaagaccc acctctgcaa gcggcctaac gccaacgaca
     1441 gcaacatccg gcaggccctg atcgaccgct tcgggccagg gaaagaactg gccataggcg
     1501 tgaagaagcg gcccggccct ctctacggta tggccgggga ttgctgggcg gccctggccg
     1561 tcgccgtcac cgcctgggat cgcctccaga ccggacaacc cgcgtgcatg ccgagggcgc
     1621 tctatgactg accgaaccga catgatcacc atcaagccgc gccagcagcg cttcgtcgat
     1681 gcgtacatgg agcaccgcgt ggccacccgc gccgccattc aggccggcta cggcagcagc
     1741 agcgccgcag acctcatgcg
//
LOCUS       DATIKR010000229         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_136837, whole genome shotgun sequence.
ACCESSION   DATIKR010000229 DATIKR010000000
VERSION     DATIKR010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136837"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /gene="cydB"
                     /locus_tag="VLL76_03465"
     CDS             complement(<1..781)
                     /gene="cydB"
                     /locus_tag="VLL76_03465"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HSV28583.1"
                     /translation="MPAIDYEFLRLAWWLILGLVLIGFAVMDGFDMGVAILLPVVARD
                     DMERRIVINSIGPVWDGNQVWLILGGGAAFAAWPPLYATAFSAFYIPLLLVLAALILR
                     PVGFDFRNKMENPTWRRVWDWALFLGGFVPTLVFGVAVGNLFIGVPFHFTEELRAIYT
                     GGFLFDLLRPFPLLCGLVSLAMLVMHGGTYLVMKTEGAIESRARFAVYAAAAALMALF
                     ALAGVVIGTVVEGHVVTAGADPLGPSNPLNKQVAVEAGGWLS"
     gene            complement(784..2361)
                     /locus_tag="VLL76_03470"
     CDS             complement(784..2361)
                     /locus_tag="VLL76_03470"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HSV28584.1"
                     /translation="MSELGVVELSRLQFALTALYHFLFVPLTLGLSWLLAIMESVWVM
                     TGREVWRDMTRFWGKLFGINFAMGVATGITMEFQFGTNWAYYSHFVGDIFGAPLALEG
                     LTAFFLESTFVGLFFFGWERLKPRTHLLVTWLVALGSSLSAMWILVANAWMQAPVGAA
                     FNPATMRMELTSLGEVFFNPVAQAKFVHTVSAGYVTGAMFVLSISAYYLLRRRHVDFA
                     KRSFAVAAAFGMASALSVVVLGDESGYVATENQKMKIAAMEGMFETEPAPAPFTLFGI
                     PDEEAGETHAAIRVPWALGLIATRSASEQLPGIKDLVAVNEGRVRAGIAAFDAIQTLR
                     ANPGDAAARAVLEKEGHHLGYGLLLRRYVEDPRQATPEQIAQAARDTVPGVAPLFWTF
                     RIMVALGFWFILLFALALWASTKREFDKRWLLWLALLSLPLPWVAAEVGWFVAEYGRQ
                     PWTIEGVLPTFLSTSSVGTTQVWTSLSAFVVFYTALLVVDLYLMVKYARLGPAAMPEP
                     PAADKRRASAQALMTED"
     gene            complement(2358..2501)
                     /locus_tag="VLL76_03475"
     CDS             complement(2358..2501)
                     /locus_tag="VLL76_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HSV28585.1"
                     /translation="MLKHEITVSLALKLVALIAIGLALFGPDDRVRPTPDAIHRLLAG
                     ERP"
BASE COUNT          477 a          854 c          899 g          326 t
ORIGIN      
        1 tggacagcca gccgccggcc tcgaccgcca cctgcttgtt cagcgggttc gacggcccca
       61 gcggatcggc gccggccgtc accacatggc cctcgaccac cgtgccgatc accacgccgg
      121 ccagggcgaa cagcgccatc agggcggcgg cggcggcgta cacggcgaag cgggcgcggc
      181 tttcgatggc gccctcggtc ttcatcacca gataggtgcc gccgtgcatc accagcatgg
      241 ccaggctgac cagaccgcac agcagcggga agggccgcag caggtcgaac aggaagccgc
      301 cggtatagat ggcgcgcaat tcctcggtga agtggaaggg gacgccgatg aacaggttgc
      361 cgaccgcgac gccgaacacc aaagtcggca cgaagccgcc caggaacagc gcccagtccc
      421 acacccgccg ccaggtgggg ttctccatct tgttgcggaa gtcgaagccg acgggccgca
      481 ggatcagcgc cgccaggacc aacaacagcg ggatgtagaa ggccgagaag gcggtggcgt
      541 aaagcggtgg ccaggcggcg aaggcggcgc cgccgcccag gatcagccac acctggttgc
      601 cgtcccacac cggcccgatc gagttgatga cgatgcggcg ctccatgtca tcgcgcgcga
      661 ccaccggcag caggatggcg acacccatgt cgaacccgtc catgaccgcg aagccgatca
      721 gcaccagccc caggatcagc caccaggcca ggcgcaggaa ttcgtagtcg atggcgggca
      781 tggtcaatcc tccgtcatca gggcctgggc cgaggcgcgg cgcttgtcgg cggcgggcgg
      841 ctcgggcatg gcggcgggac ccaggcgggc gtatttgacc atcaggtaaa ggtcgacgac
      901 cagcagggcg gtgtagaaca ccacgaaggc cgacaggctg gtccacacct gggtggtgcc
      961 gacgctggag gtggacagga aggtcggcag cacgccctcg atggtccagg gctggcggcc
     1021 gtattcggcc acgaaccagc caacctcggc ggccacccac ggcagcggca gcgacagcag
     1081 cgccagccac aacagccagc gcttgtcgaa ctcgcgcttg gtgctggccc acagcgccag
     1141 ggcgaacagc aggatgaacc agaagcccag cgccaccatg atgcggaagg tccagaacag
     1201 cggcgccacg ccgggcacgg tgtcgcgtgc cgcctgggcg atctgctcgg gcgtggcctg
     1261 gcgcgggtcc tccacatagc ggcgcagcag caggccgtag ccaaggtggt ggccctcttt
     1321 ctccagcacc gcccgggcgg cggcatctcc gggattggcg cgcagggtct ggatggcgtc
     1381 gaaggcggcg atgccggccc gcacgcggcc ctcgttgacg gcgaccaggt ccttgatgcc
     1441 cggcaattgc tcgctggccg agcgggtggc gatcaggcct agcgcccagg gaacgcggat
     1501 ggcggcatgg gtctcgccgg cctcttcgtc gggaatgccg aacagggtga agggggcggg
     1561 ggccggttcg gtctcgaaca tgccttccat ggccgcgatc ttcatcttct ggttttcggt
     1621 ggcgacatag ccggactcgt cgcccagcac caccaccgac agcgccgacg ccatgccgaa
     1681 cgcggccgcc accgcgaagg accgcttggc gaagtccacg tgacggcgcc gcagcaggta
     1741 ataggcgctg atcgacagca cgaacatggc gccggtgacg tagccggcgc tgacggtgtg
     1801 gacgaacttg gcctgggcca ccgggttgaa gaacacctcg cccagcgagg tcaactccat
     1861 gcgcatggtg gcggggttga aggccgcgcc gaccggggcc tgcatccagg cgttggcgac
     1921 caggatccac atggccgaca ggctggaccc caaggccacc agccacgtca ccagcaggtg
     1981 ggtgcgcggc ttcaggcgct cccagccgaa gaagaacagg ccgacgaagg tgctttccag
     2041 gaagaacgcg gtcaggccct ccagcgccag cggcgcgccg aagatgtcgc cgacgaagtg
     2101 ggagtaatag gcccagttgg tgccgaactg gaactccatg gtgatgccgg tggcgacccc
     2161 catggcgaag ttgatgccga acagcttgcc ccagaagcgg gtcatgtcgc gccacacctc
     2221 gcggcccgtc atcacccaca cgctttccat gatcgccagc agccacgaca ggcccagggt
     2281 cagcggcacg aacaggaagt ggtacagcgc ggtcagggcg aattgcagcc gcgacagctc
     2341 gacgacgccc agttcgctca tggccgctct ccggccagca gccggtggat tgcgtcgggc
     2401 gtcgggcgga cgcggtcgtc ggggccgaac agcgccaggc cgatggcgat gagcgccacc
     2461 agcttcagcg ccagcgacac ggtgatttcg tgcttgagca tggaccatcc ccggctcgca
     2521 ggcgggcggg gcggaagggg cagtcgagcg cagccg
//
LOCUS       DATIKR010000230         2893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40183, whole genome shotgun sequence.
ACCESSION   DATIKR010000230 DATIKR010000000
VERSION     DATIKR010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40183"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VLL76_03480"
     CDS             complement(<1..768)
                     /locus_tag="VLL76_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSV28586.1"
                     /translation="MLAALVALAILLQSFAAAAREAPASFSDLAERLLPSVVNISTTQ
                     TIKNPERIPEMPQFPPGSPFEDFFKEFFERQMRPDAQPRRATSLGSGFIIDAGGLVVT
                     NNHVIADADEITVTLHDDTVYKATVVGRDAKTDLALLKIDPGKKALVAVPWGGSDAMR
                     VGDWVVTIGNPFGLGGTVTAGIISARARDINAGPYDDFLQTDASINRGNSGGPMFNMA
                     GEVIGINTAIFSPSGGSIGIGFAIPSSLAKPVVEDLKK"
     gene            complement(896..1096)
                     /locus_tag="VLL76_03485"
     CDS             complement(896..1096)
                     /locus_tag="VLL76_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HSV28587.1"
                     /translation="MKDFLTALSLAMVIEGVTYALFPGGMQRLMSTVIRLPPPMLRAF
                     GLLIAVSGLVGVWLARATFFAP"
     gene            complement(1093..1965)
                     /gene="hflC"
                     /locus_tag="VLL76_03490"
     CDS             complement(1093..1965)
                     /gene="hflC"
                     /locus_tag="VLL76_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HSV28588.1"
                     /translation="MNRTSLVVLAVVGLVALMLAGSSLYIVNQAEQAIVLRLGAHRDT
                     VRDPGLHFKMPFIEDVVRYDLRLLALDPPAEQIILGDQKRIEVDTYTRYRIADPLKFY
                     QALKTEQQARDQLGRIVSSAMRRVMGTVMLPSLLSDERTRIMEEIQREVTERAAAYGV
                     AVTDVRIRRADLPDETSQSIYDRMKSERERQAKEARAQGYEWGQQIRARADRERTILL
                     AEAQRSANILRAEGDTEAARIFNEAYGRDPRFYDFYRSLESYRRSFGDGNTSMVLSPD
                     SEFFRYFGNGPGRK"
     gene            complement(1962..>2893)
                     /gene="hflK"
                     /locus_tag="VLL76_03495"
     CDS             complement(1962..>2893)
                     /gene="hflK"
                     /locus_tag="VLL76_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HSV28589.1"
                     /translation="AAWMATGIYRVNPDEQGVVLRFGKFVDTTEPGLHYHLPYPMESV
                     LKPKVTQINQLQLGFRSGGEGRMERSGFRDMPEESRMLTGDENIVEADFVVFWKIADA
                     GKFLFNVRDPEGTVKVAAESAMRDVIGRNPIQAALSDKREQIAQQAQDELQRLLDAYG
                     AGILVTQVQLQKVDPPGAVIDAFNDVQRARADQERARNEAEAYRNDIIPRARGEAERL
                     VQEAEAYKEQVLNQAQGETKRFMALYNAYKQSAEVTERRMYLETMEGILQNSPKIIID
                     PSAKGAQGVVPYMALPELKKQQQPAQPGQGGAR"
BASE COUNT          442 a          922 c         1027 g          502 t
ORIGIN      
        1 cttcttgagg tcctcgacca ccggcttggc caacgacgaa gggatcgcga agccgatgcc
       61 gatcgagccg cccgacggcg agaagatggc ggtgttgatg ccgatgacct cgcccgccat
      121 gttgaacatg ggaccgccgg aattgccgcg gttgatcgag gcgtcggtct gcaggaagtc
      181 gtcatagggg ccggcgttga tgtcgcgggc gcgggccgag atgatgccgg cggtgacggt
      241 gccgcccagg ccgaacgggt tgccgatggt gaccacccag tcgcccaccc gcatggcgtc
      301 ggagccgccc cacggcacgg ccaccagggc cttcttgccg gggtcgatct tcagcagcgc
      361 caggtcggtc ttggcgtcgc ggccgaccac ggtggccttg tagacggtgt cgtcatgcag
      421 ggtgacggtg atctcgtcgg cgtcggcgat gacgtggttg ttggtgacca ccaggccgcc
      481 ggcgtcgatg atgaagcccg atcccagcga ggtggcgcgg cgcggctgcg cgtcggggcg
      541 catctggcgc tcgaagaatt ccttgaagaa gtcctcgaac ggcgagcccg gcgggaattg
      601 cggcatctcg gggatgcgct cggggttctt gatggtctgg gtggtcgaga tgttgaccac
      661 cgacggcagc agccgctcgg ccaggtccga gaagctggcc ggcgcctcgc gggcggcggc
      721 ggcgaaggat tgcagcagga tggccagggc gaccagcgcc gccagcaccc aggcggccgc
      781 gctcttgtcg gcctgcgccg ccgccacgcg ggcgcggctc tggttcgcgt ttcttgggct
      841 atgcaccgac gagaccctcc ttagggggag caaccgttca aaccgtggaa cagaactatg
      901 gcgcgaaaaa ggtggcgcgc gccagccaaa ctccgaccag tcccgatacc gcgatcagca
      961 gcccgaaggc ccgcaacatg ggcggcggca ggcggatgac ggtggacatc agtcgctgca
     1021 tgccgccggg aaagagggcg taggtcacgc cctcgatcac catggcgagg ctgagcgcgg
     1081 tcaggaagtc cttcacttac ggccaggtcc gttgccgaag tagcggaaga attcgctgtc
     1141 cggcgacagc accatcgacg tgttcccgtc gccgaacgac cggcgatagg attccagcga
     1201 gcggtagaag tcgtagaagc gcggatcgcg gccataggcc tcgttgaaga tgcgggcggc
     1261 ctcggtgtcg ccttcggccc gcaggatgtt ggccgaacgc tgggcctcgg ccagcaggat
     1321 ggtgcgctcg cggtcggcgc gggcgcggat ctgctgaccc cattcgtaac cctgggcgcg
     1381 ggcttccttg gcctggcgct cgcgttccga cttcatgcgg tcatagatcg actggctggt
     1441 ctcgtccggc aaatcggcgc ggcggatgcg cacgtcggtg acggcgacgc cataggccgc
     1501 ggcccgctct gtgacctccc gctggatttc ttccatgatg cgggtgcgtt cgtccgacag
     1561 caggctgggc agcatcaccg tgcccatgac gcggcgcatg gccgacgaca cgatgcggcc
     1621 caactgatcg cgcgcctgct gttcggtctt cagcgcctgg tagaacttca gcgggtcggc
     1681 gatgcgatag cgggtgtagg tgtcgacctc gatgcgcttc tggtcgccca ggatgatctg
     1741 ctcggccggc gggtccaaag ccagcaggcg caggtcatag cgcaccacgt cctcgatgaa
     1801 cggcatcttg aagtgcaggc cggggtcgcg gacggtgtcg cggtgggcgc ccaggcgcag
     1861 cacgatcgcc tgctcggcct ggttgacgat gtagagcgac gatcccgcca gcatcagggc
     1921 caccaggccc acgacggcga ggacgacgag cgacgtgcgg ttcatcgggc gcctccctgg
     1981 ccgggctgcg ccggctgctg ctgcttcttg agttccggca gcgccatgta gggcaccacg
     2041 ccctgggcgc ccttggccga cgggtcgatg atgatcttgg gcgagttctg caggatgcct
     2101 tccatggtct ccaggtacat gcgccgctcg gtcacttcgg ccgattgctt gtaggcgttg
     2161 tacagcgcca tgaagcgctt ggtctcgccc tgggcctggt tgagcacctg ctccttgtag
     2221 gcctcggcct cctggaccag ccgctcggcc tcgccgcggg cacgcgggat gatgtcgttg
     2281 cgataggcct cggcctcgtt gcgggcgcgc tcctggtcgg cgcgggcgcg ctggacgtcg
     2341 ttgaacgcgt cgatgacggc gcccggcggg tccaccttct gcagctgcac ctgggtgacc
     2401 aggatgccgg cgccataggc gtcgagcagc cgctgcaatt cgtcctgggc ctgctgcgcg
     2461 atctgctcgc gcttgtccga cagcgccgcc tggatcgggt tgcggccgat cacgtcgcgc
     2521 atggccgatt cggcggcgac cttgacggtg ccctcggggt cgcggacgtt gaacaggaac
     2581 ttgccggcgt cggcgatctt ccagaacacc acgaaatcgg cctcgacgat gttctcgtcg
     2641 ccggtcagca tgcggctttc ctcgggcatg tcgcggaagc cggaacgctc catccggccc
     2701 tcgccacccg accggaagcc caactgcaac tggttgatct gggtgacctt aggcttaagc
     2761 accgattcca tgggataggg cagatgatag tgcaggcccg gctcggtggt gtccacgaac
     2821 ttgccgaagc gcagaaccac accctgttcg tcggggttca cgcggtagat gccggtggcc
     2881 atccaggcgg cgg
//
LOCUS       DATIKR010000231         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_51684, whole genome shotgun sequence.
ACCESSION   DATIKR010000231 DATIKR010000000
VERSION     DATIKR010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51684"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1615
                     /locus_tag="VLL76_03500"
     CDS             <1..1615
                     /locus_tag="VLL76_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HSV28590.1"
                     /translation="QLPGFKVTVEIAKLRHATPGVMLISPPPHHDIYSIEDLAQLIYD
                     LKQINPEAKVTVKLVSRSGIGTIAAGVAKAKADIILISGNVGGTGASPQTSIKFAGLP
                     WELGLSEAHQVLTLNRLRHRVKLRTDGGLKTGRDIVIAAMLGAEEFGIGTTSLIAMGC
                     IMVRQCHSNTCPVGVCTQDAALRQKFTGNPEKVVNLFSFIAEEVREILASLGVRSLNE
                     IIGRTDLIKQVSRGAAHLDDLDLNPLLAQADAGGYARYCTQSERNEVPETLDAQIIQD
                     ARPALEEGEKMQLAYNVRNVQRAIGTKMSHKITRKYGMTGLAPGQVTVRLRGSCGQSL
                     GAFAVQGLKLEVFGDANDYVGKGLSGGTIVVRPSVSSPLKSNENTIIGNTVLYGATAG
                     KLFAAGQAGERFAVRNSGASAVIEGCGSNGCEYMTGGVAVILGSVGANFGAGMTGGMA
                     FVYDGDDTFKLKVNPESVVFQPVETDHWEGVLKALIQEHVAETQSHWAEHLLADWERE
                     KRKFVQVVPKEMLSRLEHPVTRVPATAAE"
BASE COUNT          315 a          600 c          534 g          240 t
ORIGIN      
        1 ccagttgccc ggcttcaagg tcaccgtcga gatcgccaag ctgcgccacg ccacccccgg
       61 cgtgatgctg atcagcccgc cgccgcacca cgacatctat tccatcgagg atctggcgca
      121 gctcatctac gacctcaagc agatcaaccc cgaggccaag gtcacggtca agctggtgtc
      181 gcgttccggc atcggaacga ttgccgccgg cgtcgccaag gccaaggccg acatcatcct
      241 gatctcgggc aatgtcggcg gcaccggcgc cagcccccag accagcatca agttcgccgg
      301 cctgccatgg gagctgggcc tgtcggaagc ccatcaggtg ctgacgctca accgcctgcg
      361 ccaccgcgtg aagctgcgca ccgacggcgg cctcaagacc ggccgcgaca tcgtcatcgc
      421 cgccatgctg ggcgccgagg aattcggcat cggcaccacc agcctgatcg ccatgggctg
      481 catcatggtg cgccagtgcc attccaacac ctgcccggtg ggcgtgtgca cccaggatgc
      541 cgcgctgcgc cagaagttca ccggcaatcc ggaaaaggtg gtcaacctgt tcagcttcat
      601 cgccgaggag gtccgcgaga tcctggcctc cctcggcgtt cgttccctga acgaaatcat
      661 cggccgcacc gacctgatca agcaggtcag ccgtggcgcc gcccacctgg acgacctcga
      721 cctcaacccg ttgctggccc aggccgatgc cggcggctat gcccgctatt gcacccagtc
      781 cgagcgcaac gaggtgcccg agacgctgga cgcccagatc atccaggatg cccgcccggc
      841 cctggaggag ggcgagaaga tgcaactggc ctacaacgtc cgcaacgtcc agcgcgccat
      901 cggcaccaag atgagccaca agatcacccg caaatacggc atgaccggcc tggcgccggg
      961 tcaggtcacc gtgcgcctgc gcggctcgtg cggccaatcc ctgggcgcct tcgcggtgca
     1021 gggcctgaag ctcgaggtgt tcggcgacgc caacgactat gtcggcaagg gcctgagcgg
     1081 cggcaccatc gtggtgcggc cgtcggtgtc cagcccgctg aagtcgaacg agaacaccat
     1141 catcggcaac accgtgctgt acggcgccac cgccggcaag ctgttcgccg ccggccaggc
     1201 gggcgaacgc ttcgccgtcc gcaattcggg cgccagcgct gtgatcgagg gctgcggctc
     1261 caacggctgc gaatacatga ccggcggcgt cgccgtgatc ctgggcagcg tcggcgccaa
     1321 tttcggcgcc ggaatgaccg gcggcatggc gttcgtctat gacggcgacg acaccttcaa
     1381 gctcaaggtc aatccggaaa gcgtcgtctt ccagccggtc gagaccgacc attgggaagg
     1441 cgtgctcaag gccctgatcc aggaacacgt ggccgagacc caaagccact gggccgaaca
     1501 cctgctggcc gactgggagc gcgagaagcg caagttcgtc caggtggtgc cgaaggagat
     1561 gctgtcgcgg ctggaacacc cggtgacccg ggtgccggca acggcggcgg agtaaggccc
     1621 ccaccccgac cctcccccgc cttcggcggg ggagggagca acaaaaagcc ctcccccggc
     1681 aacgccggg
//
LOCUS       DATIKR010000232         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_3711, whole genome shotgun sequence.
ACCESSION   DATIKR010000232 DATIKR010000000
VERSION     DATIKR010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3711"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VLL76_03505"
     CDS             complement(<1..495)
                     /locus_tag="VLL76_03505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV28591.1"
                     /translation="MAMTLPRHGGDLDAAEARWGRPARDWLDLSTGINPWPYPLPPLP
                     AEAWTRLPGAAAELALRRAAASAFGAPAPDWVLPSPGTSALIQWLPRLRARGRVAVVG
                     PTYGEHAAAWAAAGHDVREVETLDDAEGADVTIVVNPNNPDGRVVATECFERVGGFLV
                     VDEAF"
     gene            complement(486..1592)
                     /locus_tag="VLL76_03510"
     CDS             complement(486..1592)
                     /locus_tag="VLL76_03510"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV28592.1"
                     /translation="MLAECLAGIRVLDLTQYIPGPFATQWLADLGAEVVKVEPPAGDP
                     MRIMGPRDADGSTPFYKLANRNKRVVRLDLKTEDGTRRFAALVEKADVLLEAYRPGVM
                     ARLGFDARRLAELNPRLIHCALSGYGQTGPHARRAGHDLTYVALTGGLWASGTADRPV
                     MTFPPLADHAGAQAVTSAILAALFRRERTGKGASLDVSLSEAALAWMGGILTMARRGG
                     NPAREADLINGGAAYYRVYRTKDRRYVALAALEEKFWEAFCNTVGHSEWIHRQIDPMP
                     QNELIADLEALFATRTRDEWEALLGPADCCFEPVLEPSEVPAHPQWKDRDLIQDAGDG
                     MVEVLFPMMLDGARAMRRRRFQDSSAEEVLASWR"
BASE COUNT          274 a          623 c          651 g          245 t
ORIGIN      
        1 gaaggcctcg tccaccacca ggaagccgcc gacgcgctcg aagcattcgg tcgcgaccac
       61 ccggccgtcg gggttgttgg gattgacgac gatggtgacg tcggcgccct cggcgtcgtc
      121 gagggtctcc acctcgcgca cgtcatggcc ggcggcggcc catgcggcgg catgctcgcc
      181 ataggtcggc ccgaccaccg ccacccggcc cctggcgcgc aggcgcggta gccactggat
      241 cagggcgctg gtgccggggc tgggcagcac ccaatcgggc gcgggtgcgc cgaaggcgga
      301 agccgccgcc cggcgcagcg ccaattcggc ggcggcaccg ggcaggcggg tccacgcctc
      361 ggccggcagc ggcggcagcg gatagggcca cgggttgatg ccggtggaca ggtcgagcca
      421 gtcccgggcg gggcggcccc agcgcgcctc ggcggcatcc aggtcgccgc cgtgacgcgg
      481 caaagtcatc gccatgacgc caagacctcc tcggccgagg aatcctggaa gcgacggcgg
      541 cgcatggcgc gggcgccgtc gagcatcatc gggaacagca cctcgaccat gccgtcgccg
      601 gcatcctgga tcaaatcacg gtccttccat tgcgggtggg cgggaacctc ggacggctcc
      661 agcaccggtt cgaaacagca atcggccggc cccagcaatg cctcccactc gtcacgggtg
      721 cgggtggcga acaaagcctc caggtcggcg atcagttcgt tctgcggcat ggggtcgatc
      781 tggcggtgaa tccattccga atggccgaca gtattgcaga acgcctccca gaacttctcc
      841 tccagcgccg ccagggcgac gtagcggcgg tccttggtgc gatagacgcg gtaataggcg
      901 gcgccgccgt tgatcagatc ggcctcgcgc gccggattgc cgccacgccg cgccatggtc
      961 aggatgccgc ccatccaggc cagcgccgcc tcggacaggc tgacgtcgag gctggcgccc
     1021 ttgccggtgc gctcgcgccg gaacagcgcc gccaggatgg ccgatgtcac cgcctgggcg
     1081 ccggcatggt cggccagcgg cggaaaggtc atcaccgggc ggtcggcggt gccgctggcc
     1141 cacagcccgc cggtcagcgc cacataggtc aggtcatggc cggcgcggcg ggcatgcggc
     1201 ccggtctggc cgtaacccga cagagcgcaa tggatcaggc gcgggttcag ttcggccagc
     1261 cgcctggcgt cgaagcccag ccgcgccatc acgccggggc gataggcctc cagcagcacg
     1321 tcggcctttt cgaccagcgc cgcgaaccgg cgggtgccgt cctcggtctt gaggtcgagc
     1381 ctgaccaccc gcttgttgcg gttggcgagc ttgtagaacg gcgtcgagcc gtcggcatcg
     1441 cgcggcccca taatccgcat cgggtcgccc gccggcggct cgaccttgac cacctcggcg
     1501 ccgagatcgg ccagccattg ggtggcgaag gggccgggga tgtattgggt caggtccagc
     1561 acccggatgc cggcaagaca ttcggcgagc atgcgcacct ccatcacgat gacggcatag
     1621 ggaagcagcc ggggccggcg cggtcaagtc atgccacctc gcgcaggaag ccgcgcaggg
     1681 cctcgacctg cagcggcttg tgcagcaggt gcatgccggc gccgacgatg tggcggatgg
     1741 tggcggggtc ggtgtcgccg gtcaggatca gcgccggcat ctcgatgccg cag
//
LOCUS       DATIKR010000233         1778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40206, whole genome shotgun sequence.
ACCESSION   DATIKR010000233 DATIKR010000000
VERSION     DATIKR010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40206"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="VLL76_03515"
     CDS             complement(<1..661)
                     /locus_tag="VLL76_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HSV28593.1"
                     /translation="MRRLPCTPRPDWGDRVESLGFDFHTIDGAIYWDERAYWHFTAAE
                     IDILDDASAELHGLCLQAVEHAMAGDGLERLGITGLAAELARDSWRRREPHFYGRFDL
                     AWTGDGPPKLLEYNADTPTSLFEAAVVQWQWLQDFAPEADQFNWIHEALVARWADIAI
                     GVAGRTALHLACVTPHAEDEGTLRYLQATALEAGLATKAVGLADIGWNGRDFVDLDGQ
                     AI"
     gene            complement(664..1245)
                     /locus_tag="VLL76_03520"
     CDS             complement(664..1245)
                     /locus_tag="VLL76_03520"
                     /inference="COORDINATES: protein motif:HMM:NF018408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HSV28594.1"
                     /translation="MRRSKRIATLTAGGACLVILAACDDSAVLPDTVTIHPNIDSCTQ
                     ATGKLVACQQAFSEALSAHYTQAQKHPDRASCEERYGQGNCTPIQGQRGEAFVPAIAG
                     FVLGSALGVASGVPVHYDRQGYARVVGGFTLGKKQEEEEQQSSSGGGSGGGGSWSKGS
                     RKPTTISTADSNLRGSRIMRGGFGNSFSFHGGG"
     gene            complement(1251..1640)
                     /locus_tag="VLL76_03525"
     CDS             complement(1251..1640)
                     /locus_tag="VLL76_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HSV28595.1"
                     /translation="MGNIGAYLAYFSVSLALLVGGVAAYAAITPYRELTLIRAGNSAA
                     AWSLGGTALGLAAAIASAAAHSMSFLDMLLWAAIALVGQLAAFLAVSKLVPGLRGGIE
                     DDKAGYGILLGALSLAVGLINAGSLTW"
BASE COUNT          283 a          603 c          629 g          263 t
ORIGIN      
        1 ggatggcctg gccgtcgaga tcgacgaagt cgcggccgtt ccagccgatg tcggccaacc
       61 ccaccgcctt ggtggccagt ccggcctcca gcgccgtcgc ctgcaggtag cgcagggtgc
      121 cctcgtcctc ggcatggggc gtcacgcagg ccagatgcag ggcggtccgg cccgccacgc
      181 cgatcgcgat gtcggcccag cgcgccacca gggcttcgtg gatccagttg aactggtcgg
      241 cctcgggcgc gaaatcctgc agccattgcc attgcacgac cgccgcctcg aacaggctgg
      301 tgggggtgtc ggcgttgtat tccagcagct tgggcgggcc gtcgccggtc caggcgaggt
      361 cgaagcggcc atagaagtgg ggttcgcggc ggcgccaact gtcgcgcgcc agttcggcgg
      421 ccaggccggt gatgcccagc cgctccaggc cgtcgcccgc catggcatgc tccaccgcct
      481 gcaggcacag gccatgcaac tcggcgctgg cgtcgtcgag gatgtcgatc tcggcggcgg
      541 tgaagtgcca ataggcgcgc tcgtcccaat agattgcgcc gtcgatggtg tggaagtcga
      601 agcccaggga ctcgacccgg tcaccccaat ccggccgggg cgtgcagggc agccgccgca
      661 aagtcagccg ccgccgtgga agctgaagga attgccgaag ccgccccgca tgatgcggct
      721 gccgcgcagg ttggaatcgg cggtggagat ggtggtcggc ttcctgctgc ccttggacca
      781 cgagccgccg ccgccgctac cgccgccgga cgaggattgc tgttcctcct cttcctgctt
      841 cttgcccagg gtgaagccgc cgaccacgcg ggcatagccc tggcggtcgt aatgcaccgg
      901 cacccccgag gccacgccca gcgcgctgcc cagcacgaaa ccggcaatgg cggggacgaa
      961 cgcctcgccg cgctggcctt ggatcggggt gcaattgcct tgcccatacc tctcttcgca
     1021 gctggcgcgg tcggggtgct tttgggcctg ggtgtaatgg gcggacaggg cctcgctgaa
     1081 cgcctgctgg caagcgacca gcttgcctgt ggcctgggtg caggaatcga tgttggggtg
     1141 gatggtgacg gtgtcgggca gcaccgccga atcatcgcag gcggccagga tgaccaggca
     1201 ggcgccgccg gcggtcaggg tggcgatccg tttcgagcgt cgcatggcgg ctaccaggtc
     1261 aaggagccgg cgttgatcag gccgacggcc agcgacaggg cgcccagcag gatgccatag
     1321 cccgccttgt cgtcctcgat gccgccccgc aggcccggaa ccagcttcga gaccgccagg
     1381 aaggccgcca actgcccgac cagggcgatg gccgcccaca gcagcatgtc gaggaagctc
     1441 atgctgtgcg ccgccgcgct ggcgatggcg gccgccaggc caagcgcggt gccgcccagg
     1501 ctccacgccg ccgccgaatt gccggcgcgg atcagcgtca gctcacgata gggcgtgatg
     1561 gcggcatagg ccgcgacccc gccgaccagc agggccagcg acaccgagaa ataggcgaga
     1621 taggcaccga tgttccccac ggctcccctc cggaacgatt gtgcgcaccg gatagtacaa
     1681 ccgcctaggc gaaagtctag gaattgtcgg ccagcaccgt tccggccaga tagagcgagc
     1741 cgcagatcag gatgcgggct ggctcggggt tggcggcc
//
LOCUS       DATIKR010000234         2815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_100288, whole genome shotgun sequence.
ACCESSION   DATIKR010000234 DATIKR010000000
VERSION     DATIKR010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100288"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2577
                     /gene="secA"
                     /locus_tag="VLL76_03530"
     CDS             <1..2577
                     /gene="secA"
                     /locus_tag="VLL76_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HSV28596.1"
                     /translation="INALEAEFQALTDEQLRGKTEEFKQRLADGTDLDDLLVEAFATV
                     REGAKRALGMRPFDVQLIGGMVLHLGKISEMKTGEGKTLVATLPVYLNALTGAGVHVV
                     TVNDYLARRDAEWMGRLYNFLGLTVGIIVHGQTDEQRRDAYACDITYATNNELGFDYL
                     RDNMKFRLEEMVQRPFHYAIVDEVDSILVDEARTPLIISGPTEDNSDLYRLVNQIMPN
                     LVAEDFEKDEKVRAVTLTDRGVEHVEAMLAEAGLLKGGLYDVANVSLVHHVNQALRAH
                     TLFTRDVDYIVKSDKVIIIDEFTGRMMEGRRFSEGLHQALEAKEGVTIQNENQTLASI
                     TFQNFFRLYPKLAGMTGTAMTEAGEFQEIYNLEVVEIPTNVAVSRKDADDEVYRTARE
                     KFDAIVTLIEECRGRLQPVLVGTTSIEKSELLSELLKKKNIPHHVLNARYHEQEAYIV
                     AQAGIPGGVTIATNMAGRGTDIQLGGNVDMRVRMELDEITDDAERARRTEAIKAEVAA
                     NKQKVLESGGLYVVGTERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDDLMRIFGSQ
                     RMDGMLQKLGLKEGEAIVHPWINKALEKAQQKVEARNFDVRKNLLKFDDVMNDQRKVI
                     YEQRKELMQADDVAEDVAAMRHEVIAEMVAKCIPERAYAEEWDTAGLHEEVLRVFNLD
                     LPIADWAKEEGIADQEIKARVTEAVDRKMAGKAAEYSPEIMRMVEKSMLLQILDQAWK
                     EHLLQLDHLRQGIGLRAYAQRDPLNEYKREAFNLFEQMLHDLRERVTSVLAHVELRVG
                     PAEEEMEQALAPRQSGAMHETRDDPAFAQASQSDWADTPRNAPCPCGSGKKYKHCHGA
                     VA"
BASE COUNT          565 a          950 c          900 g          400 t
ORIGIN      
        1 atcaacgcgc tggaggcgga attccaggcc ctgaccgacg aacagttgcg gggcaagacc
       61 gaggagttca agcagcggct ggccgacggc accgacctcg acgacctgct ggtcgaggcg
      121 ttcgccaccg tgcgcgaagg cgccaagcgc gccctgggca tgcggccgtt cgacgtgcag
      181 ctgatcggcg gcatggtcct gcacctgggc aagatttccg agatgaagac cggcgaaggc
      241 aagacgctgg tcgccaccct gccggtctac ctcaacgccc tgaccggcgc cggcgtgcac
      301 gtggtcaccg tcaacgacta cctggcgcgg cgcgacgccg agtggatggg caggctctac
      361 aacttcctgg gcctgaccgt cggcatcatc gtccacgggc agaccgacga gcagcgccgc
      421 gacgcctatg cctgcgacat cacctatgcc accaacaacg agctgggctt cgactacctg
      481 cgcgacaaca tgaagttccg cctggaggag atggtccagc ggccgttcca ctacgccatc
      541 gtcgatgagg tcgattcgat cctggtggac gaggcccgca cgcccctgat catttccggc
      601 ccgaccgagg acaattccga cctctatcgc ctggtcaacc agatcatgcc gaacctggtg
      661 gccgaggatt tcgagaagga cgagaaggtc cgcgccgtca ccctgaccga ccgcggcgtc
      721 gagcatgtcg aggcgatgct ggccgaggcc ggcctgctga agggcggcct gtacgacgtc
      781 gccaacgtca gcctggtgca ccacgtcaac caggccctgc gcgcccacac cctgttcacc
      841 cgcgacgtcg attacatcgt caagagcgac aaggtcatca tcatcgacga gttcaccggc
      901 cgcatgatgg aaggccggcg cttctcggag gggctgcacc aggcgctgga ggccaaggaa
      961 ggcgtcacca tccagaacga gaaccagacc ctggcctcga tcaccttcca gaacttcttc
     1021 cgcctctatc ccaagctggc cggcatgacc ggcaccgcca tgaccgaggc cggcgagttc
     1081 caggagatct acaacctgga agtcgtcgag atccccacca acgtggcggt gtcgcgcaag
     1141 gacgccgacg acgaggtcta tcgcacggcg cgcgagaagt tcgacgccat cgtcaccctg
     1201 atcgaggaat gccggggccg cctgcagccg gtgctggtcg gcaccacctc gatcgagaag
     1261 tccgagctgc tgtccgagct tctgaagaag aagaacatcc cgcaccacgt gctgaacgcc
     1321 cgctaccacg agcaggaagc ctatatcgtg gcccaggccg gcatccccgg cggcgtcacc
     1381 atcgccacca acatggccgg ccgcggcacc gacatccaat tgggcggcaa cgtggacatg
     1441 cgcgtgcgca tggagctgga cgagatcacc gacgacgccg agcgcgcccg gcgcaccgag
     1501 gccatcaagg ccgaggtcgc cgccaacaag cagaaggtgc tggaatccgg cggcctgtac
     1561 gtggtcggca ccgagcgcca tgaaagccgc cgcatcgaca accagttgcg cggccgctcc
     1621 ggccgccagg gcgaccccgg cgcgtcgaag ttcttcctgt cgctggaaga cgatctgatg
     1681 cgcatcttcg ggtcgcagcg catggacggc atgctgcaga agctgggtct caaggaaggc
     1741 gaggccatcg tccatccctg gatcaacaag gcgctggaaa aggcgcagca gaaggtcgag
     1801 gcgcgcaatt tcgacgtccg caagaacctg ctgaagttcg acgacgtcat gaacgaccag
     1861 cgcaaggtca tctatgagca gcgcaaggag ctgatgcagg ccgacgacgt cgccgaggac
     1921 gtcgccgcca tgcgccacga ggtgatcgcc gagatggtcg ccaagtgcat ccccgagcgc
     1981 gcctatgccg aggaatggga cacagccggc ctgcacgagg aagtgctgcg ggtgttcaac
     2041 ctggacctcc ccatcgccga ctgggcgaag gaggaaggca tcgccgacca ggagatcaag
     2101 gcccgcgtca ccgaggcggt ggaccgcaag atggccggca aggcggcgga atacagcccc
     2161 gagatcatgc gcatggtcga aaagagcatg ctgctgcaga tcctggacca ggcgtggaag
     2221 gagcacctgc tgcagctcga ccacctgcgc cagggcatcg gcctgcgcgc ctatgcgcag
     2281 cgcgacccgc tcaacgaata caaacgggaa gccttcaacc tgttcgaaca gatgctgcac
     2341 gatctgcgcg agcgcgtgac cagcgtgctg gcccatgtgg aactgcgcgt cggcccggcc
     2401 gaggaagaaa tggaacaggc cctggcccca cgccaatccg gcgccatgca cgaaacccgc
     2461 gacgacccgg ccttcgccca ggcgtcgcaa tccgactggg ccgacacccc gcgcaacgcc
     2521 ccctgcccct gcggctcggg caagaagtac aagcactgcc acggcgcggt ggcgtaatgg
     2581 atttttccgt catcccgggc gagcatcgcg agacccggga tccattgggg tgcaccacca
     2641 tggaccccgg ctcgcgctgc gcttggccgg ggtgaccagg aaggaatggc gttctccgct
     2701 cagctctcga ccggcctgtc cgtcaccacc caggtgccgt ccttgaggcg gcaggcttcg
     2761 gcctcgcggg aatgggagcc ggtcttcagc gtgacttcct gcttcagcag gcggc
//
LOCUS       DATIKR010000235         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_221747, whole genome shotgun sequence.
ACCESSION   DATIKR010000235 DATIKR010000000
VERSION     DATIKR010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221747"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..2052
                     /gene="uvrB"
                     /locus_tag="VLL76_03535"
     CDS             7..2052
                     /gene="uvrB"
                     /locus_tag="VLL76_03535"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HSV28597.1"
                     /translation="MVSDHRPTGDQPQAIEELAANIRAGVRDQVLLGVTGSGKTFTMA
                     HVIQRTGKPTLILAPNKTLAAQLYAEMKSFFPNNAVEYFVSYYDYYQPEAYIPRTDTY
                     IEKDSQINEQIDRMRHAATRALLERRDVILVASVSCIYGIGSVESYARMTIPLKVGES
                     YDQRDLLKRLVELQYTRNDAAFERGTFRVRGDGLEIFPVHYEDRAWKCSFFGDELESI
                     AEFDPLTGEKTCALTEVVVYPSSHYVTPRPTITQAMKGIKAELKETLERFAQEGKLLE
                     AQRLDQRTTFDLEMLEATGHCKSIENYSRYLTGRKPGDPPPTLFEYLPEDALLIVDES
                     HVTVPQIGGMYRGDYNRKSCLADFGFRLPSCIDNRPLKFEEWDAMRPQSVFVSATPGP
                     WEMDRTGGVFTEQVIRPTGLVDPICVVKPVEHQVDDLLAEVREVSRKGYRTLVTVLTK
                     RMAEDLTEYLHDHGVRVRYLHSDIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPE
                     CALVAILDADKEGFLRSKTSLVQTIGRAARNIEGKVILYADKMTDSLEYAIGETNRRR
                     EKQQAYNAEHGITPASVKKGISDALDSVYEQDYVTVDTSDAGLAHAVGKDLKAVKADL
                     EKRMRAAAADLEFEEAARLRDELRRLEAVELGVPVGLMAKGGAAQKDGRKGKGRGRR"
BASE COUNT          418 a          711 c          660 g          313 t
ORIGIN      
        1 ttcaccatcg tcagcgacca ccggcccacc ggcgaccagc cccaggccat cgaggaactg
       61 gccgccaaca tccgtgccgg agtgcgcgac caggtgctgc tgggcgtcac cggctcgggc
      121 aagaccttca ccatggccca cgtcatccag cgcaccggca agccgacgct gatcctggcg
      181 cccaacaaga cgttggcggc gcagctctac gccgagatga agagcttctt ccccaacaat
      241 gcggtggaat acttcgtctc gtattacgac tactaccagc cggaagccta catcccgcgc
      301 accgacacct atatcgagaa ggattcgcag atcaacgagc agatcgaccg catgcgccat
      361 gcggcgaccc gcgcgttgct ggaacgccgc gacgtcatcc tggtggcgtc ggtgtcgtgc
      421 atctacggca tcggctcggt ggaatcctat gcccgcatga ccatcccgct gaaggtgggc
      481 gaaagctacg accagcgcga cctgctgaag cggctggtgg aactgcaata cacaaggaac
      541 gacgccgcct tcgagcgcgg caccttccgg gtgcgcggcg acgggctgga gatcttcccg
      601 gtccactacg aggaccgcgc ctggaaatgc tcgttcttcg gcgacgaact ggaaagcatc
      661 gccgagttcg acccactgac cggcgagaag acctgcgcgc tcaccgaggt ggtggtctat
      721 ccctccagcc actacgtgac tccgcgcccg accatcaccc aggccatgaa gggcatcaag
      781 gccgagctca aggagacgct ggagcgcttc gcccaggagg gcaagctgct ggaggcgcag
      841 cggctggacc aacgcaccac cttcgacctg gagatgctgg aggccaccgg ccactgcaag
      901 tcgatcgaga actattcccg ctatctcacc ggccgcaagc ccggcgaccc gccgccgacc
      961 ctgttcgaat atctgcccga ggacgcgctg ctgatcgtgg acgaaagcca cgtcaccgtg
     1021 ccgcagatcg gcggcatgta ccggggcgac tacaatcgca agtcctgcct ggcggatttc
     1081 ggcttccgcc tgccgtcctg catcgacaac cggccgctga agttcgagga atgggacgcc
     1141 atgcggccgc aatcggtgtt cgtgtcggcc acccccggcc cgtgggagat ggaccgcacc
     1201 ggcggcgtgt tcaccgaaca ggtcatccgt cccaccggcc tggtcgatcc catctgcgtg
     1261 gtcaagccgg tggagcacca ggtggacgac ctgctggccg aggtgcgcga ggtcagccgc
     1321 aagggctatc gcaccctggt cacggtgctg accaagcgca tggccgagga cctgacggaa
     1381 tacctgcacg accacggggt gcgggtgcgc tacctgcatt ccgacatcga cacgctggag
     1441 cgcatcgaga tcatccgcga cctgcgcctg ggcgccttcg acgtgctgat cggcatcaac
     1501 ctgctgcgcg agggactcga catcccggaa tgcgccttgg tcgccatcct cgacgccgac
     1561 aaggaaggct tcctgcgctc gaagacctcg ctggtccaga ccatcggccg cgccgcccgc
     1621 aacatcgaag gcaaggtcat cctgtacgcc gacaagatga ccgacagcct ggaatacgcc
     1681 atcggcgaga ccaatcgccg ccgcgagaag cagcaggcct acaacgccga gcacggcatt
     1741 accccggcca gcgtcaagaa gggcatctcg gacgcgctcg acagcgtgta cgagcaggat
     1801 tacgtcaccg tagacacctc cgatgccggc ctcgcccatg cggtcggcaa ggacctcaag
     1861 gcggtcaagg ccgatttgga aaagcgcatg agggccgccg ccgccgacct ggaattcgag
     1921 gaggccgccc gcctgcgcga cgaattgcgc cggctcgagg cagtggagct gggcgttccg
     1981 gtcgggctga tggccaaggg tggggcggcc cagaaggacg gccgcaaggg caaggggcgc
     2041 ggccggcgtt gacccctacc cgaatggata aaattcggtg gattttcctg cgaaaaagag
     2101 tc
//
LOCUS       DATIKR010000236         1788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40239, whole genome shotgun sequence.
ACCESSION   DATIKR010000236 DATIKR010000000
VERSION     DATIKR010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40239"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..1152
                     /locus_tag="VLL76_03540"
     CDS             118..1152
                     /locus_tag="VLL76_03540"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HSV28598.1"
                     /translation="MKLVTPADVPVLGPVQSRVAMAAMTRGFAPDHLANPAMADYYRR
                     RAADGVGLILTEGVVIHHSADGYNNVPHIETDAQAESWKPVVRAVQAAGARIFCQLWH
                     CGRISHADYCGGQPPVSSTNRAAEGINRQNDKPFGTPRALDTDEMPVVYAQYLDAARR
                     ALAAGFDGVQLHFGHGYLVDQFFDARVNDRTDRYGGSVENRCRFAVECLEAVLKEVPA
                     DKVMVRISPSREMGGLYDWPDMESMLDHLLPAFARLGLKMLDVSCAAADYYKTSGRVI
                     RMVRPKWQGLLIGGASLTPAQGEAELAEGLVDMVTWGRALIANPDFIAKVKAGQELAA
                     FDRAMLAELV"
     gene            complement(1548..>1788)
                     /locus_tag="VLL76_03545"
     CDS             complement(1548..>1788)
                     /locus_tag="VLL76_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28599.1"
                     /translation="DSRAPLPMPLLSDASDVTNAVASRVDQARQAVDERLTRMDATDQ
                     QRVRQTAGAFLHEMEMVLYSLRGVLDTLRAPNPRS"
BASE COUNT          287 a          632 c          576 g          293 t
ORIGIN      
        1 tcgccgcctg cgcgacgagg gcctggagcg catgcggccg tggcgcgccg ccctgtcgga
       61 atacctggcc cgcccctatt tccgcgacct gttcgccccc tatcgcaagg attgacgatg
      121 aagctggtca cccccgccga cgtgcccgtt ctcggccccg tgcaaagccg cgtcgccatg
      181 gcggccatga cccgcggctt cgcgcccgac catctggcga acccggcgat ggcggactat
      241 taccgccgcc gcgccgccga cggcgtgggc ttgatcctga ccgagggcgt ggtcatccac
      301 cactcggccg acggctacaa caacgtcccc cacatcgaga ccgacgccca ggcggaaagc
      361 tggaagccgg tggtgcgggc ggtgcaggcg gcaggcgcca ggatcttctg ccagctgtgg
      421 cattgcggcc gcatctcgca tgccgattat tgcggcggcc agccgccggt cagctccacc
      481 aaccgcgccg ccgagggcat caaccgccag aacgacaagc cgttcggcac cccgcgcgcg
      541 ctggacaccg acgagatgcc ggtggtctac gcccagtatc tcgacgccgc caggcgcgcc
      601 ctggcggccg gcttcgacgg cgtgcaactg cacttcggcc acggctatct ggtcgaccag
      661 ttcttcgatg cccgcgtcaa cgaccgcacc gaccgctatg gcggctcggt cgaaaaccgc
      721 tgccgcttcg ccgtcgaatg cctggaagcc gtgctgaagg aggtgcccgc cgacaaggtg
      781 atggtgcgca tcagtccgtc gcgcgagatg ggcggccttt acgactggcc cgacatggaa
      841 tccatgctcg accacctgct gcccgccttc gccaggctgg gccttaaaat gctcgacgtg
      901 tcctgcgccg ccgccgacta ttacaagacc tcgggccgcg tcatccgcat ggtgcgcccg
      961 aagtggcagg gcctgctgat cggcggcgcc tcgctgaccc ccgcccaggg cgaggccgaa
     1021 ctggccgagg gcctggtgga catggtcacc tggggccgcg ccctgatcgc caaccccgac
     1081 ttcatcgcca aggtcaaggc cgggcaggag ctggcggcgt tcgaccgggc gatgctggcg
     1141 gaactggttt aggctggaaa aagacccatc cgtcatggcc gggccctgcc cccttcccgt
     1201 catcgccggg ctcgacccgg cgatccacgt ggcagccgaa ggaactccct tggaagcaat
     1261 gcgttaggct gatccgcgtg gatgcccgga tcaagtccac ggcttccggc ttagggtcaa
     1321 gccaaccttc aggcattcat cgcgtggtgg atgggaggtt gaccacagag acacagaggc
     1381 acagagaggc cgtccagact tttccaagcc taatgaattc ccatggcgtg gacgggagga
     1441 acaacgcatc catccgcaca atatctctgt gcctctgtgt ctctgtggtg aattcttgtg
     1501 tccgcctatc cacccgcgtc ggttccaata ccttgacggt cagggcatca cgatctcggg
     1561 ttcggcgcgc gcagggtgtc gagcacgccg cgcaggctgt agagcaccat ttccatctcg
     1621 tgcaggaacg ccccggcggt ctggcgcacc cgctgctggt cggtggcgtc catgcgggtc
     1681 agccgctcgt ccaccgcctg gcgcgcctgg tccacccgcg acgccaccgc gttggtgacg
     1741 tccgaggcgt cgctgagcag cggcatgggc agcggcgccc ggctgtcg
//
LOCUS       DATIKR010000237         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_209430, whole genome shotgun sequence.
ACCESSION   DATIKR010000237 DATIKR010000000
VERSION     DATIKR010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209430"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /gene="sucA"
                     /locus_tag="VLL76_03550"
     CDS             <1..929
                     /gene="sucA"
                     /locus_tag="VLL76_03550"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386315.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HSV28600.1"
                     /translation="AHFEVIDSPLSEEAVLGFEYGFSLAEPNGLTLWEGQFGDFANGA
                     QVIFDQFISSGESKWLRMSGLVMLLPHGYEGQGPEHSSARWERYLQLCAEDNWSVCNI
                     TTPANYFHALRRQIHRNFRKPLVIMTPKSLLRHKLAVSPLDDFLTGSRFRRVLPETEK
                     LVADAKVRRVLLCSGKVYYDLFEERQKRGIDDVAIIRVEQLYPWPKDTIKHQLARYPD
                     AELMWVQEEPANMGPWTFVDRRIEFICEELDIKAKRATYVGRKAAASPATGLYKTHNA
                     EQAWICETALSGDIASIAQPFRRATKLSRLTA"
     gene            954..>1841
                     /locus_tag="VLL76_03555"
     CDS             954..>1841
                     /locus_tag="VLL76_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HSV28601.1"
                     /translation="MTTKITVPALGESISEATVAKWLKNVGDAIKADEPIVELETDKV
                     TAEVPAPASGVLTEILVQAGTTVEIGAILGAIGEGSGAAAAPAKAAAPAAAAPAPVAA
                     APAPAAAPTGAPAFPSAAKLAADTGIDTAGIAGSGKGGRVTKGDVLEAAAAPKAAPAP
                     AAPSGPRPKAALEERVKMTRLRKRIAERLKEAQNTAAMLTTFNEVDMTAAFEVRNMYK
                     DQFEKKHGVKLGFMSFFVKACISALKDWPAVNAEIDGDDLVYKNYYDIGVAVGTPSGL
                     VVPVVRNADQLSFAEVEKTI"
BASE COUNT          326 a          674 c          573 g          268 t
ORIGIN      
        1 aggcccattt cgaggtcatc gacagcccgt tgtcggaaga ggcggtgctg ggcttcgaat
       61 acggcttctc gctggccgag cccaacggcc tgaccctgtg ggaaggccag ttcggcgact
      121 tcgccaacgg cgcccaggtc atcttcgacc agttcatcag ctcgggcgag tccaagtggc
      181 tgcgcatgtc cggcctggtg atgctgctgc cgcacggcta cgagggccag ggtcccgagc
      241 attcgtcggc ccgctgggag cggtacctgc agctgtgcgc cgaggacaat tggtcggtgt
      301 gcaacatcac caccccggcc aattacttcc atgcgctgcg ccgtcagatc caccgcaact
      361 tccgcaagcc gctggtgatc atgacgccga agtcgctgct gcgtcacaag ctggcggtgt
      421 cgccgctgga cgacttcctg accggctcgc gcttccgccg cgtgctgccc gaaaccgaga
      481 agctggtcgc cgacgccaag gtccgccgcg tgctgctgtg ctcgggcaag gtctattacg
      541 acctgttcga ggagcgccag aagcgcggca tcgacgacgt cgccatcatc cgcgtcgagc
      601 agctctatcc gtggccgaag gacaccatca agcaccaact ggcgcgctac cccgacgccg
      661 agctgatgtg ggtccaggaa gagcccgcca acatggggcc gtggaccttc gtcgaccgcc
      721 gcattgagtt catctgcgag gaactcgaca tcaaggccaa gcgcgccacc tatgtcggcc
      781 gcaaggccgc ggcctcgccg gccaccggcc tctacaagac ccacaacgcc gagcaggcgt
      841 ggatctgcga aaccgcgctg tcgggcgaca tcgcctcgat cgcccagccg ttccgccgcg
      901 ccaccaagct ctcgcgcctc accgcctagg aagtaaaaag ggaacgccaa aaaatgacga
      961 ccaagatcac ggtgcccgcc ctgggcgaat ccatctccga agccaccgtc gcgaagtggc
     1021 tgaagaacgt cggtgacgcc atcaaggccg acgagccgat cgtcgagctc gaaaccgaca
     1081 aggtcaccgc cgaggtgccc gcgccggctt cgggcgtgct gaccgaaatc ctcgtccagg
     1141 ccggcaccac cgtcgagatc ggcgccatcc tgggtgccat cggcgaaggc tcgggtgccg
     1201 ccgccgctcc ggccaaggcc gccgctcccg ccgccgccgc tccggctccg gttgccgccg
     1261 cgccggcccc ggccgctgct ccgaccggtg cccccgcctt cccgtcggcc gccaagctgg
     1321 ccgccgacac cggcatcgac accgccggca tcgccggttc cggcaagggc ggccgcgtca
     1381 ccaagggcga cgtgctcgag gccgccgccg cgccgaaggc cgccccggcc ccggccgctc
     1441 cctccggccc ccgccccaag gcggcgctgg aagagcgcgt caagatgacc cgtctgcgca
     1501 agcgcatcgc cgagcgtctg aaggaagccc agaacaccgc cgccatgctg accaccttca
     1561 acgaggtgga catgaccgcc gcgttcgaag tgcgcaacat gtacaaggac cagttcgaga
     1621 agaagcacgg cgtcaagctg ggcttcatgt ccttcttcgt gaaggcctgc atctcggccc
     1681 tgaaggactg gccggccgtc aacgccgaga tcgacggcga cgacctggtc tacaagaact
     1741 actacgacat cggcgtcgcc gtcggcacgc cctcgggcct ggtggttccg gtggtccgca
     1801 acgccgacca gctctcgttc gccgaggtcg agaagaccat c
//
LOCUS       DATIKR010000238         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_100418, whole genome shotgun sequence.
ACCESSION   DATIKR010000238 DATIKR010000000
VERSION     DATIKR010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100418"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..883)
                     /locus_tag="VLL76_03560"
     CDS             complement(<1..883)
                     /locus_tag="VLL76_03560"
                     /inference="COORDINATES: protein motif:HMM:NF028468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE3 domain-containing protein"
                     /protein_id="HSV28602.1"
                     /translation="MHIEAHGRARLLDWHLLGLAVILIGVAATRAHSYLLVHSLAEFF
                     WIAVALTTFSIAWNTRHHLDNTFLLVSGISLGPVALIALIHTLAYKGMGVFAADANLA
                     TQLWIASRTLDAASVLTAAMLGRRQVSARLVLLVTTGAGATLTVLIFAGAFPDCFVEG
                     QGLTPFKVAMEYAIMLAFTLTLLRLRQIRELFPTTLYRLMVAATVLALAEEAAFTLYR
                     DVYGALNLAGHLIAIVYGYLIYAGVVRYGLANPEQALFHQLNTLNERLQDKALRDNER
                     AALALEAVEGAAWEWPTD"
     gene            complement(995..1669)
                     /locus_tag="VLL76_03565"
     CDS             complement(995..1669)
                     /locus_tag="VLL76_03565"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV28603.1"
                     /translation="MLALTDTCQASIYSRGRLCACLEPSALGRLRAAAGDQAVAPGSL
                     VHADGEAAQSVFGLRQGVVMLFKQLPDRRRQVLSFLYPGDMFGLSDDGRHIATAVALT
                     RVGLCRIPLTAAERDPNLARQLRSVAEASLADALDHALTLGRMTARERVGRFLAETWK
                     RNCCPAELHLPMRIADIGDHLGLRAETVSRCLADLRRAGMIGPWQCDGFMAVIAPLEL
                     TRQFGG"
BASE COUNT          304 a          548 c          639 g          236 t
ORIGIN      
        1 ggtcggtcgg ccattcccag gcggcgcctt cgaccgcctc cagggccagc gcggcgcgct
       61 cgttgtcgcg cagggccttg tcctgcaggc gctcgttgag ggtgttgagc tggtggaaca
      121 gcgcctgctc gggattggcg aggccatagc gcaccacgcc ggcatagatc agatagccgt
      181 agacgatggc gatcaggtgg ccggccaggt tgagggcgcc gtagacgtcg cggtaaaggg
      241 tgaacgccgc ttcctcggcc agggccagca cggtggccgc caccatcagg cggtacaggg
      301 tggtcgggaa cagctcgcgg atctggcgca gccgcagcag ggtcagggtg aaggccagca
      361 tgatggcgta ttccatcgcc accttgaacg gggtcagccc ctggccctcg acgaagcaat
      421 cggggaacgc acccgcgaag atcaggacgg tcagcgtcgc gccggcgccc gtcgtcacca
      481 gcagcaccag ccgtgccgac acctgccgcc gccccagcat cgccgccgtc aggacgctgg
      541 ccgcgtccag cgtgcgcgag gcgatccata attgagtcgc caggttggcg tcggcggcga
      601 acacccccat gcccttgtag gccagggtgt ggatcagcgc gatcagcgcc accggcccca
      661 gcgagatgcc ggacaccaac aggaaggtgt tgtcgaggtg gtggcgggtg ttccaggcga
      721 tggaaaaggt ggtcagcgcc accgcgatcc agaagaactc ggcgagggaa tggaccagca
      781 ggtagctgtg ggccctggtt gcggcgacgc cgatcaggat gaccgccagg cccagcaaat
      841 gccagtccag gagacgcgcc cgcccatgag cctcgatatg catcttccat tcctaatgga
      901 aagcgaacct accccgtcag tatgctcccg gatcgagggg gtggacagcg gctattggcc
      961 gcaagcccat ccttcttaag aaggggggaa tgcgtcaacc gccgaactgg cgggtcagtt
     1021 ccagcggcgc gatgaccgcc atgaagccat cgcactgcca ggggccgatc atgccggcgc
     1081 gccggaggtc ggcaaggcaa cggctgacgg tctcggcgcg caggcccaga tggtcgccga
     1141 tgtcggcgat cctcatgggc aggtgcaatt cggcggggca gcaattgcgc ttccaggtct
     1201 cggccaggaa gcggccgacc cgctcgcgcg cggtcatgcg gcccaaggtc agggcatggt
     1261 ccagggcgtc ggcaaggctg gcctcggcga cgctgcgcaa ctggcgggcc aggttggggt
     1321 cgcgctcggc ggcggtcagc gggatgcggc acaggccgac gcgggtcaaa gcgacggcgg
     1381 tggcgatgtg gcggccgtcg tcggacaggc cgaacatgtc gccgggatag aggaacgaca
     1441 gcacctgacg gcgccggtcg ggcagttgct tgaacagcat caccacgccc tggcgcaggc
     1501 cgaagacgga ttgggcggcc tcgccgtcgg cgtggaccag gctgccgggc gcgacggcct
     1561 ggtcgccggc cgcggcgcgc aggcggccca gggccgacgg ctccaggcag gcgcacaggc
     1621 gaccgcggga atagatgctg gcttggcagg tgtcggtcag ggcaagcatg gcgtgtcccg
     1681 aagaaaaagc ggtgccggga cccgaaggcc ccggcacctg ggccatt
//
LOCUS       DATIKR010000239         2142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_27820, whole genome shotgun sequence.
ACCESSION   DATIKR010000239 DATIKR010000000
VERSION     DATIKR010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27820"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..745)
                     /locus_tag="VLL76_03570"
     CDS             complement(<1..745)
                     /locus_tag="VLL76_03570"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSV28604.1"
                     /translation="MSLPRWADVVAYEEGEQETLHAMSCGYPRFFLHPLYHQLRRTFA
                     AAARPGEAVWVFPSAQVAWACVAHVGAGRVATAGGGVALVLVPDALQAKVKEFWQHTG
                     MIVSSRLADAILANRPAGSADALTRLRGLVAEYNGVGADDIHLAPSGMGAIHQAHLAV
                     TAVRAGHPVQLGFPYIDTLKLLQKFGGGAYFPYNSADDIEPLAAAVGGGAVSAVFCEV
                     PGNPLLRTIDLARLCAILRPQGVPLVVDDT"
     gene            complement(897..2096)
                     /gene="megL"
                     /locus_tag="VLL76_03575"
     CDS             complement(897..2096)
                     /gene="megL"
                     /locus_tag="VLL76_03575"
                     /EC_number="4.4.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020507261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018826 - methionine gamma-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0009087 - methionine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0009093 - cysteine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine gamma-lyase"
                     /protein_id="HSV28605.1"
                     /translation="MSADHSRKGFSTRAIHHGYNPLDYHGALNPPLFLSSTFAFDRSD
                     TGSDRFAGAAQGYVYSRVGNPTVSILEERLAALEDGEAALATSSGMGALTAVLLTLLS
                     SGDEIVADKTLYGCTFGLLRHQIARLGISTRFIDLTDPKNLPAAITPRTKLVIAESPA
                     NPNMRLVDIATVAEICRKAKVLLMIDNTYCTPYLQRPIALGADIVVHSATKYLGGHGD
                     LLAGAVVAKKELIDQFRFVGVKEMNGACISTFDAYLVLRGMKTLTLRMDRHSETATRL
                     AHDLEGHPAVERVYFPGLDSFPQKDLAIRQMRKFGGMIALELKGGLAAGRAFMDGVRL
                     ATRAVSLGDAETLIQHPASMTHATYTAEERRKHGFTDGLIRLSVGLEDYEDLNADLIG
                     ALDRLGR"
BASE COUNT          356 a          687 c          751 g          348 t
ORIGIN      
        1 aggtgtcgtc caccaccagc gggaccccct gcgggcgcag gatggcgcac agccgtgcca
       61 ggtcgatggt gcgcagcagc gggttgcccg gaacttcgca gaacaccgcc gagacggcgc
      121 cgccccccac cgccgccgcc agcggctcga tgtcgtcggc ggaattgtag ggaaagtaag
      181 cgccgccgcc gaatttctgc agcagtttga gggtgtcgat gtagggaaag ccgagctgca
      241 ccgggtggcc ggcgcggacg gcggtcacgg ccaggtgggc ctggtggata gcgcccatgc
      301 cggatggcgc gagatggatg tcgtcggccc cgacgccgtt gtattcggcc accagccccc
      361 tgagccgcgt caacgcatcg gccgaacccg ccggccggtt cgccaggatg gcatcggcca
      421 ggcgcgacga aacgatcatg ccggtatgtt gccagaattc cttgaccttg gcctgcaggg
      481 cgtcgggcac cagcaccagc gcgacgccgc cgcccgccgt cgcgacccgg ccggcgccga
      541 catgggcgac gcaggcccac gccacttggg ccgacgggaa cacccacacc gcttcgcccg
      601 gccgcgccgc cgcagcgaag gtccgccgca actgatgata caggggatgg aggaagaagc
      661 ggggatagcc gcagctcatg gcatgcaggg tttcctgctc accctcttca taggcgacca
      721 cgtcagccca tcgcggcagg ctcaccgaga cggcgtgcgg cctgccaggc agcggcgctc
      781 cgaaaggtcg ggaaccgtta acctccaggc ccatggcgac gtccccgtaa ttccagtttg
      841 atttttcccg tttaacgggt gtggtcgggc acacggcccc ccgcaggggg ccagcctcac
      901 cggccgagac ggtcgagggc tccgatcagg tcggcgttga ggtcttcgta atcctcgagc
      961 ccgaccgaca gccggatcag cccgtcggtg aagccgtgct tgcggcgttc ctcggcggtg
     1021 taggtggcgt gagtcatgct ggccggatgc tgaatcagcg tctcggcgtc gcccaggctg
     1081 accgcccggg tcgccagccg caccccatcc atgaaggcgc gcccggcggc cagcccgccc
     1141 ttcagctcca gcgcgatcat gccgccgaac ttgcgcatct gccggatcgc cagatccttt
     1201 tgcgggaagc tgtcgagtcc ggggaagtaa acgcgctcga ccgctgggtg gccctcgagg
     1261 tcgtgggcca gcctggtggc ggtctcgctg tgacgatcca tgcgcagggt cagcgtcttc
     1321 atcccgcgca gcaccagata ggcgtcgaag gtcgagatgc aggcgccgtt catttccttg
     1381 acgccaacga agcggaactg gtcgatcagt tccttcttcg cgacgacggc gccagccaga
     1441 agatcgccat gtccgcctag atacttggtg gccgaatgga cgacgatgtc ggcgcccaag
     1501 gcgatcggcc gctgcagata gggcgtgcaa taggtgttgt cgatcatcaa cagtaccttg
     1561 gccttgcggc agatctcggc aacggtggcg atgtcgacca ggcgcatgtt ggggttggcc
     1621 ggtgattccg cgatgaccag cttggtgcgc ggggtgatcg ccgcgggcag gttcttgggg
     1681 tcggtcaggt cgatgaagcg ggtggagatg cccagccgcg cgatctggtg ccgcaacagg
     1741 ccgaaggtgc agccgtacaa ggtcttgtcg gcgacgatct cgtcgccgga gctgagcagt
     1801 gtcaggagca ccgccgtcag cgcccccatg cccgacgagg tcgccagcgc cgcttcgccg
     1861 tcctcgagcg ccgccagacg ctcttccagg atcgagacgg tggggttgcc gacccggctg
     1921 tagacatagc cctgggcggc gccggcgaag cggtcgctgc cggtgtccga gcggtcgaac
     1981 gcgaaggtgg agctgagaaa caggggcggg ttgagcgcgc cgtgataatc cagcgggttg
     2041 tagccgtgat ggatggcacg ggtggagaag ccttttcggg aatggtcggc gctcatacgg
     2101 tctccttgat attgatgatc ggccctaggc gagggcaggc at
//
LOCUS       DATIKR010000240         2327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_124734, whole genome shotgun sequence.
ACCESSION   DATIKR010000240 DATIKR010000000
VERSION     DATIKR010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124734"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1385
                     /gene="thiC"
                     /locus_tag="VLL76_03580"
     CDS             <1..1385
                     /gene="thiC"
                     /locus_tag="VLL76_03580"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HSV28606.1"
                     /translation="IRENLRRAEMREAAARDGEDFGADIPDQVTPEFVRDEIARGRAI
                     IPSNINHPEAEPMIIGRNFLTKINANIGNSAVASSVAEEVEKMVWAIRWGGDTVMDLS
                     TGRHIHATREWILRNSPVPIGTVPIYQALEKVDGKAEDLTWEVFRDTLIEQCEQGVDY
                     FTIHAGVRLAYIPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEEICEILKVYD
                     VAFSLGDGLRPGSIADANDAAQFAELETLGELTHRAWKHDCQVIIEGPGHVPMHKIKQ
                     NVEKQLKLCGEAPFYTLGPLVTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLG
                     LPDRQDVREGVVTYKLAAHAADLAKGHPAARERDDALSRARFEFRWRDQFNLSLDPEK
                     AMDFHDQTLPAEGAKLAHFCSMCGPKFCAYKISQEVRDIAAEQGMEAMSEKFKAEGAE
                     IYKVEKPAAE"
     gene            complement(1435..1620)
                     /locus_tag="VLL76_03585"
     CDS             complement(1435..1620)
                     /locus_tag="VLL76_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28607.1"
                     /translation="MRGTCPFCNSTLPTHGQCCRVPDDLDRFARVYERLQHEHRNEFL
                     QDNLVRYLEAFGRDMHF"
     gene            complement(1739..2146)
                     /locus_tag="VLL76_03590"
     CDS             complement(1739..2146)
                     /locus_tag="VLL76_03590"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HSV28608.1"
                     /translation="MPAVEWSDDLSVGIEVLDGHHKRLIALLNDLAEVVRRQDAQEVV
                     GRTLGELIRYTYYHFGEEERLMEEAGYDDLDAHRQSHRIIADHVRGMEAEWDANPRTV
                     VAAELFEFLSDWLIHHIRVEDARYTPILAGGTP"
BASE COUNT          440 a          784 c          734 g          369 t
ORIGIN      
        1 ccatccgcga gaacctgcgc cgcgccgaga tgcgtgaagc cgccgctcgc gacggcgagg
       61 atttcggcgc cgacatcccc gaccaggtga cgccggaatt cgtgcgcgac gagatcgcgc
      121 gcggtcgcgc catcatcccc tcgaacatca accaccccga agccgagccg atgatcatcg
      181 gccgcaattt cctgaccaag atcaacgcca acatcggtaa ttcggcggtg gcgtcgtcgg
      241 tggcggaaga ggtggagaag atggtgtggg ccatccgctg gggcggcgac accgtgatgg
      301 acctgtccac cggccgccac atccacgcca cccgcgaatg gatcctgcgc aacagccccg
      361 tccccatcgg caccgtgccg atctatcagg cgctggagaa ggtggacggc aaggccgagg
      421 acctgacctg ggaggtgttc cgcgacaccc tgatcgagca atgcgagcag ggcgtcgatt
      481 acttcaccat ccatgctggc gtacgcctgg cctacatccc gctgaccgcc aagcgcgtca
      541 ccggcatcgt gtcgcgcggc ggctcgatca tggccaagtg gtgcctggcg caccacaagg
      601 agaacttcct ctacacccat ttcgaggaaa tctgcgagat cctcaaggtc tatgacgtcg
      661 ccttcagcct gggcgacggc ctgcgccccg gttccatcgc cgacgccaac gacgccgccc
      721 agttcgccga gctggagacc ctgggcgagc tgacccaccg cgcgtggaag cacgattgcc
      781 aggtcatcat cgaaggcccc ggccacgtgc ccatgcacaa gatcaagcag aacgtcgaaa
      841 agcagttgaa gctgtgcggc gaggcgccgt tctacaccct ggggccgctg gtcaccgaca
      901 tcgcgccggg ctacgaccac atcaccagcg ccatcggcgc cgccatgatc ggctggttcg
      961 gcaccgccat gctgtgctac gtgacgccca aggaacacct tggcctgccc gaccgccagg
     1021 acgtgcgcga aggcgtggtg acctacaagc tcgccgccca cgcagccgac ctcgccaagg
     1081 gccatccggc cgcccgcgaa cgcgacgacg ctttgagccg cgcccgcttc gaattccgct
     1141 ggcgcgacca gttcaacctg tcgctcgacc cggaaaaggc catggacttc cacgaccaga
     1201 ccctgccggc cgagggcgcc aagctggccc atttctgctc gatgtgcggc cccaagttct
     1261 gcgcctacaa gatcagccag gaagtccgcg acatcgccgc cgagcagggc atggaagcga
     1321 tgagcgagaa gttcaaggcg gaaggcgccg agatctacaa ggtggagaag ccggcggcgg
     1381 agtaggtcga aaggcgcggg ccgtcgagcc gaggctgact gcccggccag ccgtctagaa
     1441 atgcatgtcc cgcccgaagg cttcgagata gcggaccagg ttgtcttgca ggaactcgtt
     1501 gcggtgttcg tgctgcaggc gctcatagac ccgcgcgaaa cggtcgaggt cgtccgggac
     1561 gcggcagcat tggccgtggg ttggcagcgt gctgttgcag aacgggcagg ttcctctcat
     1621 ggccgtctcc cctaagaccg ataacctgta gcaacagcct aggggcgggc ggggcgagga
     1681 acaaattgtc ctagggcggg atggggtggt ccgttgggac gatgccctat ccggtcggtt
     1741 agggggtgcc gcccgcaagg ataggggtat agcgggcgtc ctccacccgg atatggtgga
     1801 tcagccagtc cgacaggaac tcgaacaatt ctgctgcgac caccgtacgg ggattggcgt
     1861 cccactcggc ttccatgccg cgcacatggt cggcgatgat gcggtgggac tggcggtggg
     1921 cgtccaggtc gtcgtacccg gcctcctcca tcaggcgctc ttcctcgccg aaatggtaat
     1981 aggtgtagcg gatcagttcg ccgagcgtgc ggcccaccac ctcctgggcg tcctggcgcc
     2041 gcaccacttc ggccagatcg ttcagcaacg cgatcaggcg cttgtgatgg ccgtccagaa
     2101 cctcgatccc cacactgaga tcgtcggacc attcaaccgc aggcatgcat actcccctat
     2161 ccaccaggcg gaacgatagc atggcgaagg tttgcggtgc cagcgctcac gccacctcga
     2221 ccatgaccag ttcgcaatcc tcggatgctt cgatgtcgag cctgtcctcg ccgtcggcca
     2281 ccaggcccga gcgctcgccc acggcgatgc cgttgaccac cacgcac
//
LOCUS       DATIKR010000241         2583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_209523, whole genome shotgun sequence.
ACCESSION   DATIKR010000241 DATIKR010000000
VERSION     DATIKR010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209523"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /gene="hemA"
                     /locus_tag="VLL76_03595"
     CDS             <1..884
                     /gene="hemA"
                     /locus_tag="VLL76_03595"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HSV28609.1"
                     /translation="MGQVKAAHRLARDAGTCGTELETVLQAAFSAAKRVRSETAIGEG
                     PVSIAAAAVQLARDLHGDIAACKGLLVGAGDMGELICESLQAAGLSWLAVTAPRASRA
                     EAVAQALNGVVVPFEDLKEALAGADVVVTAIGGRNLAISAAAVTDALKKRRRKPMLLV
                     DSGIPGDIEPAVNRVDGAFLYDLNDMEKVALEGRATREQAARAAWAILDEELAAFLKG
                     RAARVAVPAIVALRERFEDMREQVLAEAGDDPVAATRLLVNRLLHAPTEAMKSVAAEG
                     AEWQAMEKTLRKLFRLD"
     gene            998..2050
                     /gene="prfA"
                     /locus_tag="VLL76_03600"
     CDS             998..2050
                     /gene="prfA"
                     /locus_tag="VLL76_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HSV28610.1"
                     /translation="MNLDTQLDKVLYRYDELRELLSSGDGGSFAKLSKELSDLEPIVE
                     AVQALKKARADMEGAEALMADPDMKDLAAEEYYALKETLPTLERNVQLMLLPKDEADE
                     KNAILEVRAGTGGEEAALFAAELFRMYERYAAGKGWRFEVMDVNETGIGGMKEASATI
                     TGRGVFARLKFESGVHRVQRVPATEAGGRIHTSAATVAIMPEAEEVDIQLNESDLRFD
                     VYRSQGSGGQSVNTTDSAVRVTHIPTGLAVACQQEKSQHKNKATALKLLRARLYEMER
                     AAKDAERAANRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDEVMGGNIDELV
                     EALIAADQAERLAEMA"
     gene            2047..>2583
                     /locus_tag="VLL76_03605"
     CDS             2047..>2583
                     /locus_tag="VLL76_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HemK family protein methyltransferase"
                     /protein_id="HSV28611.1"
                     /translation="MTTAGAAARTIAERLVAAGIDTARLDARMLVAEVLGVETNRVFT
                     HPETPLSAEQSERLEALAARRAAREPISHILGRRGFWTLTLKVTADTLDPRGDTETVV
                     EAVLDRLTDRNRPWRLLDFGTGTGAILLALLSELPNATGVAVDRSAAALAVARDNAIA
                     NNLAERVAFVQADWGSGLS"
BASE COUNT          441 a          905 c          888 g          349 t
ORIGIN      
        1 tgatgggcca ggtcaaggcc gcccaccgcc tggcgcgtga cgccggcacc tgcggcaccg
       61 agctggagac ggttttgcag gccgcgtttt ccgccgccaa gcgggtacgc agcgagaccg
      121 ccatcggcga gggcccggtc agcatcgccg ccgccgccgt ccagcttgcc cgcgacctgc
      181 acggcgacat cgccgcctgc aagggcctgc tggtgggggc gggcgacatg ggcgaactga
      241 tctgcgaaag cctgcaggcg gcgggcctgt cgtggctggc cgtcaccgcc ccgcgcgcca
      301 gccgggccga ggcggtggcg caggcgctca acggcgtggt ggtgccgttc gaggatctca
      361 aggaggcact tgccggtgcc gacgtggtgg tgaccgcaat cggcggccgc aacctggcga
      421 tcagtgccgc cgccgtcacc gacgcgctga agaagcgccg ccgcaagccc atgctgctgg
      481 tcgattccgg cattccgggc gacatcgagc cggcggtcaa ccgggtcgac ggcgctttcc
      541 tctacgacct caacgacatg gaaaaggtgg cgctggaagg ccgcgccacc cgcgaacagg
      601 ccgcccgcgc cgcctgggcc atcctggacg aggagcttgc cgccttcctc aagggccgcg
      661 ccgcccgcgt cgccgtgccg gccatcgtcg ccttgcgtga gcggttcgag gacatgcgcg
      721 agcaggtgct ggcggaagcc ggcgacgacc ccgtcgccgc cacccgcctg ctggtcaacc
      781 gcctgctgca cgcccccacc gaggcgatga aatccgtcgc cgccgaggga gcggagtggc
      841 aggcgatgga aaagacgctt agaaagctgt ttcggttgga ttagttaatt cgtcactccc
      901 gcgtaggcgg gagtccatgg ctccgtctga ccgggcggcg ccgtcgatgg attcccgctt
      961 tcgcgggaat gacgcttctt ggtgatgggc ggaacgaatg aacctcgata cccaactcga
     1021 caaggtcctc tatcgctatg acgagctgcg cgagctgctg tccagcggcg acggcggctc
     1081 gttcgccaag ctgagcaagg aattgtcgga cctcgagccc atcgtcgagg cggtgcaggc
     1141 gctgaagaag gcgcgcgccg acatggaagg cgccgaggcc ctgatggccg atcccgacat
     1201 gaaggatctg gcggccgagg aatattacgc gctgaaggag acgctgccga cgctcgagcg
     1261 caacgtccaa ctgatgctgc tgcccaagga cgaggccgac gaaaagaacg ccatcctgga
     1321 ggtgcgcgcc ggcaccggcg gcgaggaagc cgctttgttc gccgccgagt tgttccgcat
     1381 gtacgagcgc tacgccgccg gcaagggctg gcgcttcgag gtgatggacg tcaacgagac
     1441 cggcatcggc ggcatgaagg aagccagcgc caccatcacc ggccgcggcg tgttcgcccg
     1501 cctgaagttc gaatccggcg tgcaccgggt ccaacgcgtg cccgccaccg aggccggcgg
     1561 ccgcatccat acctcggccg ccacggtggc gatcatgccc gaggcggaag aggtggacat
     1621 ccagttgaac gaaagcgacc tgcgcttcga cgtctaccgc tcgcagggct cgggcggcca
     1681 gtcggtcaac accaccgact cggcggttcg cgtcacccat atccccaccg gcctggccgt
     1741 cgcctgccag caggaaaaga gccagcacaa gaacaaggcc accgcgctga agctgctgcg
     1801 cgcccgcctg tacgagatgg aacgcgcagc caaggacgcc gaacgggcag ccaaccgcaa
     1861 gagccaggtc ggctcgggcg accgctcgga acgcatccgc acctacaact tcccccaggg
     1921 ccgcgtcacc gaccaccgca tcaacctgac gctttacaag atcgacgagg tgatgggcgg
     1981 caacatcgac gaactggtcg aggccctgat cgccgccgac caggccgaac gcctggcgga
     2041 gatggcgtga ccacggccgg cgccgccgcc cgcacaatcg ccgaacggct ggtcgccgcc
     2101 gggatcgaca cggcgcggct ggacgcccgc atgctggtgg ccgaggtgct gggcgtcgag
     2161 accaaccggg ttttcaccca ccccgagacg ccgttgtccg ccgaacagtc cgagcgcctg
     2221 gaagccctgg cggcacggcg ggcggcccgc gagccgatca gtcacatcct ggggcggcgc
     2281 ggcttctgga ccctgacgct caaggtcacc gccgacaccc tggacccgcg cggcgacacc
     2341 gagacggtgg tcgaggcggt gctcgaccgc ctgaccgacc gtaaccggcc gtggcgactg
     2401 ctggatttcg gcaccggcac cggcgccatc ctgctggcgc tgctgtcgga actgcccaac
     2461 gccaccggcg tcgcggtcga tcgctccgcc gccgccctgg cggtcgcgcg cgacaacgcc
     2521 atcgccaaca acctcgccga acgggtggcg ttcgtgcagg ccgattgggg cagcgggctg
     2581 tcc
//
LOCUS       DATIKR010000242         2771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_173238, whole genome shotgun sequence.
ACCESSION   DATIKR010000242 DATIKR010000000
VERSION     DATIKR010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173238"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1371)
                     /locus_tag="VLL76_03610"
     CDS             complement(<1..1371)
                     /locus_tag="VLL76_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HSV28612.1"
                     /translation="MTAARACLHCGSPIPSGLGGDFCCRGCEGAYALISGMGFDTYYR
                     RRCIDPAARTLKPDEEAEAVHDFSAHVAQGDDGQAVLHLMIEGIHCAACVWLIEGLLS
                     RQQGVSWARVNMTTRRLVVRWNPAENDAAALLAPVLRVGYRLVPYDPAKLGRETEKAE
                     RELLRAMAVAGFSAGNVMLLSVSVWAGHFSYMGQHTRDLMHWISALVVLPAVLYCVRP
                     FARSAITALRAGRTNMDVPITLGVTLASAMSLAETIRGGEHAYFDSAITLLFFLLIGR
                     YLDSRARGRARSAAEHLLALDAVAVTVVEPDGTQRMLPPGKVAAGATVLVATGERIGV
                     DGIVTDGVSDVDTSLISGESVPVAVQPGARVFAGTINLSGPLRLMVDAVGERTLLAEI
                     VRMMEVAEQGRAKYVALADRVARWYAPVVHVASLATFLGWVFVGGIEWQVALLHAVAV
                     LIITCPC"
     gene            complement(1368..1856)
                     /locus_tag="VLL76_03615"
     CDS             complement(1368..1856)
                     /locus_tag="VLL76_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HSV28613.1"
                     /translation="MAKARQPGWWYPYIFVGAFLVVIGVNGALAYFATSTFTGLETEG
                     AYEKGLAYNTNLAMAKAQAELGWTVDTTVSPVAGEVPRAEIVITYKDRDGRPVDGLDV
                     RAQLLRPTVKGHDHGVVLEPKGKGTYSLIHALPFKGVWDMDVAAIGKDVSYQHAKRFV
                     IP"
     gene            complement(1863..>2771)
                     /locus_tag="VLL76_03620"
     CDS             complement(1863..>2771)
                     /locus_tag="VLL76_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV28614.1"
                     /translation="AYQVLGEIFTLQAGIGTYTTIIIVGGFCFLLAGWGREQICVYMC
                     PYSRFQAAMFDEHSLLISYEAWRGEPRGSAKRGQSFEGRGHCIDCKMCVHACPTGIDI
                     REGMQLACIGCGLCIDACDSIMDKFGLPRGLITYDSISNQQARETGRTPKLKLVRGRT
                     IIYSAMVLAISALMVFSLGTRKTVEVNVLHERAPMYVQLSDGSIRNGYTFKILNMVRV
                     DRAFTLKVAGIEGATLEVVGGEAGVPQTTLDVKGDEVGTFRVYVSAPEANTKGKSTPL
                     YLILTDTSAEGSAEIRHETVFAGPER"
BASE COUNT          468 a          917 c          976 g          410 t
ORIGIN      
        1 gcagggacag gtgatgatca gcacggcgac ggcgtgcagc agcgccacct gccattcgat
       61 gccgcccacg aacacccagc ccaggaaggt cgccagcgag gcgacgtgga cgacgggggc
      121 ataccagcgc gccacccggt cggccagggc gacgtatttg gcgcggccct gctcggccac
      181 ctccatcatg cgcacgatct cggccagcag ggtgcgctcg cccacggcgt ccaccatcag
      241 ccgcaacggg ccggacaggt tgatggtgcc ggcgaacacg cgggcgccgg gctgcaccgc
      301 caccggcacg ctttcgcccg agatcaggct ggtgtccacg tccgacacgc cgtcggtgac
      361 gatgccgtcg acgccgattc gctcgccggt ggcgaccagc acggttgcgc cggcggcgac
      421 cttgccgggc ggcagcatgc gctgggtgcc gtcgggctcg accacggtga cggcgacggc
      481 gtccagggcc agcaagtgct cggccgccga gcgggcgcgg ccacgggcgc ggctgtcgag
      541 gtagcggccg atcagcagga agaacagcag ggtgatggcg gaatcgaaat aggcgtgctc
      601 gccgccccgg atcgtctcgg ccaggctcat ggccgaggcc agcgtcacgc ccagggtgat
      661 cggcacgtcc atgttggtgc ggccggcgcg cagggcggtg atggccgagc gggcgaacgg
      721 gcggacgcaa tacagcaccg ccggcagcac caccagggcc gagatccagt gcatcaggtc
      781 gcgggtgtgc tggcccatgt acgagaaatg gccggcccac accgacaccg acagcagcat
      841 gacgttgccg gccgagaagc cggcgacggc catggcgcgc agcaactcgc gctcggcctt
      901 ctcggtctcg cggcccagct tggcggggtc gtagggcacc agccggtagc cgacccgcag
      961 caccggcgcc agcaaggcgg cggcgtcgtt ctcggccggg ttccagcgca ccaccaggcg
     1021 gcgggtggtc atgttgacgc gggcccacga cacgccctgt tgccgcgaca gcagtccctc
     1081 gatcagccag acgcaggcgg cgcagtggat gccctcgatc atcaggtgca gcaccgcctg
     1141 gccgtcgtca ccctgggcga cgtgggccga gaagtcgtgg acggcctcgg cctcttcgtc
     1201 gggcttcaag gtgcgcgccg ccgggtcgat gcagcggcgg cggtaatagg tgtcgaaccc
     1261 catgccgctg atcagggcat aggcgccctc gcagccgcga cagcagaaat cccccccgag
     1321 gccggagggg atgggagacc cgcaatgaag gcaggcgcgc gcggcggtca cggaatgacg
     1381 aagcgctttg cgtgctggta cgagacgtcc ttgccgattg cggcgacatc catgtcccac
     1441 acgcccttga acggcagcgc gtggatcagg ctataggtgc ccttgccctt gggctcgagc
     1501 accacgccgt ggtcgtggcc cttgacggtg gggcgcagca attgcgcccg cacgtccagg
     1561 ccatcgaccg ggcggccgtc gcgatccttg taggtgatca cgatctccgc ccggggcact
     1621 tcgccagcca ccggcgagac ggtggtgtcc accgtccagc ccagctcggc ctgggccttc
     1681 gccatggcca ggttggtgtt gtaggccaag cccttctcat aggcgccctc ggtctccaac
     1741 cccgtgaagg tcgaggttgc gaaataggcg agggcgccgt tgacgccgat caccaccagg
     1801 aaagcgccga cgaagatgta gggataccac caaccgggct ggcgggcttt ggccatgtgc
     1861 ttttacctct cgggaccggc gaagacggtt tcgtggcgga tctcggccga gccctcggcc
     1921 gaagtgtcgg taaggatcag atacagcggc gtcgacttgc ccttggtgtt ggcctcgggg
     1981 gccgacacgt agacgcggaa ggtgccgacc tcgtcgccct tgacgtcaag ggtggtctgg
     2041 ggcacgccgg cctcgccgcc gaccacttcc agggtggcgc cttcgatgcc ggcgaccttc
     2101 agcgtgaagg cgcgatcgac gcggaccatg ttcaggatct tgaaggtgta gccgttgcgg
     2161 atgctgccgt cggacaattg cacgtacatg ggcgcgcgct cgtgcagcac gttgacttcc
     2221 acggtcttgc gggtgcccag cgagaacacc atcagggccg agatcgccag caccatcgcc
     2281 gagtagatga tggtgcggcc gcgcaccagc ttgagcttgg gagtccggcc ggtctcgcgg
     2341 gcctgctggt tcgagatcga gtcataggtg atcaggccac gcggcagccc gaacttgtcc
     2401 atgatcgaat cgcaggcgtc gatgcacagg ccgcaaccga tgcaggccaa ttgcatgcct
     2461 tcgcggatgt cgatgccggt ggggcaggcg tggacgcaca tcttgcagtc gatgcaatgg
     2521 ccgcgcccct cgaagctctg gccgcgcttg gccgagccgc gcggctcgcc gcgccaggcc
     2581 tcgtacgaga tcagcagcga atgctcgtcg aacatggccg cctggaagcg cgaataggga
     2641 cacatgtaga cgcagatctg ctcgcggccc caaccggcca gcaggaagca gaagccgcca
     2701 acgatgatga tggtggtgta ggtgccgatg ccggcctgca gcgtgaagat ctcgcccagc
     2761 acctgatagg c
//
LOCUS       DATIKR010000243         2219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_184892, whole genome shotgun sequence.
ACCESSION   DATIKR010000243 DATIKR010000000
VERSION     DATIKR010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184892"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VLL76_03625"
     CDS             <1..698
                     /locus_tag="VLL76_03625"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSV28615.1"
                     /translation="WLAALAAGVMPFLVLPFRRIAWPRGVASHHPGILRFFLLTSFNS
                     IIALAPTHLATLIVGTLLGPAAAGLFRVAKQFADAAAKPAEFLAQALYPEAARLSAAD
                     DHARLKSVLRRLSLAAFTFAALAVALLAGLGEIVLRLAAGSEFAAAAPVMTALVVASG
                     LAMAAAPVEPVLIALGQAGRVVAIKAAVAALHVALLLVLAQAFGLLGAGVAAAVAAAG
                     TFILLWGAARKAL"
     gene            complement(661..1755)
                     /locus_tag="VLL76_03630"
     CDS             complement(661..1755)
                     /locus_tag="VLL76_03630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV28616.1"
                     /translation="MPADPPPLRVMLLLHAPTGGGAQRRVLQLAGALAARGVAVELAL
                     AERRGELAEQVPPVRVTMLRGPRWPNRMARMAAVVPDLAMRLRRDRPDVLVGAANHVH
                     LAALTAHALAGRPCPLVLRVSNHLGGRRGRPLVDWVKRRTVALYRRADALVAVSEDIA
                     RQLRQLAPGADVRVLPNPVVDGRLVVPLDLGGTVVLGVGRLEKQKDFPTLIRAAARLR
                     VRLVILGEGSQRRELQELARSLGVDLHLPGFVADPLPWMAGASAFALSSAWEGMPGAL
                     IEAMACGTPVVSTDCPGGAAEILRHGQLGPLVPVGDDAALAEALRHLLAHPPDREALR
                     RRAADFSVEAGAEAYLSLFTELCGRHPTTG"
     gene            1882..>2219
                     /locus_tag="VLL76_03635"
     CDS             1882..>2219
                     /locus_tag="VLL76_03635"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV28617.1"
                     /translation="MTDAVRTLIDALAAGDNPHSPITIHGPRGAEIQATTWGDLDGES
                     TVLARRLLSAGFAAGDRIGLVADTDLSFLLLFVALQKAGLVPVPLPLPNAFGDRAAHA
                     ERIERMLAAAG"
BASE COUNT          294 a          816 c          793 g          316 t
ORIGIN      
        1 ggtggttggc ggctctggcg gccggtgtca tgccgttcct ggtgctgccg ttccgccgta
       61 tcgcgtggcc gcgcggcgtc gcttcgcacc atcccggcat cctgcgcttc ttcctgctga
      121 ccagtttcaa ttccatcatc gcgctggccc ccacccacct cgccaccctg atcgtcggca
      181 ccctgctggg gccggctgcg gcgggattgt tccgggtcgc caagcaattc gccgacgccg
      241 ccgccaagcc cgccgagttc ctggcccagg cgctgtatcc tgaagccgcc cggctgtcgg
      301 cggccgacga ccatgcccgg ctcaaatcgg tgctgcgcag gctgtcgctg gcggctttca
      361 ctttcgcagc gctggcggtg gcgctgctgg cggggctggg cgagattgtg ctgcggctgg
      421 ccgccgggtc cgagttcgcc gccgccgcgc cggtgatgac ggcgctggtg gtggcgtccg
      481 gcctcgccat ggcggcggcg ccggtcgagc cggtgctgat cgcgctgggg caggcgggcc
      541 gggtggtcgc gatcaaggcg gcggtggcgg cgctgcacgt ggccctgctg ctggtcctgg
      601 cacaggcctt tggcctgctc ggcgccggtg tggcggcggc cgtggcggcg gcggggacct
      661 tcatcctgtt gtggggtgcc gcccgcaaag ctctgtgaac aggcttagat aggcctcggc
      721 gccggcctcg accgagaaat cggcggcacg gcgacgcagg gcctcgcggt cgggcggatg
      781 ggcgagcaga tggcgcaacg cctcggccag ggcggcatcg tcgcccaccg gcaccagcgg
      841 ccccaattgc ccatggcgca ggatctcggc ggcaccgccg gggcaatcgg tggacaccac
      901 cggggtgccg caggccatgg cctcgatcag agcgccgggc atgccttccc aggccgagga
      961 caaagcgaag gccgaggcgc ccgccatcca cggcagcggg tcggcgacga agccgggcag
     1021 atgcaggtcc acccccaagg accgcgccaa ttcctgcagc tcccgccgct ggctgccttc
     1081 gcccaggatc accagccgca cgcgcaggcg tgccgccgcc cggatcaggg tggggaagtc
     1141 cttctgcttc tccagccgcc cgacgcccag caccaccgtg ccgcccaggt ccagcggcac
     1201 gaccaatcgg ccgtccacca ccgggttggg cagcacccgc acatccgccc ccggcgccag
     1261 ttggcgcaat tggcgggcga tgtcttcgga caccgccacc agggcgtcgg cgcgccgata
     1321 cagcgccacc gtgcgccgct tcacccaatc gaccagggga cgcccgcgcc gtccgcccag
     1381 atggttgctg acccgcagca ccagcgggca gggccgcccc gccaaggcgt gggcggtcag
     1441 ggcggccaga tggacatggt tggcggcgcc caccaggacg tccggtcggt cgcggcgcag
     1501 ccgcatggca aggtcgggga cgaccgccgc catccgggcc atgcggttcg gccagcgcgg
     1561 cccgcgcagc atggtcaccc gcaccggcgg cacctgctcc gccagttcac ccctgcgttc
     1621 ggccaaggcc agttccaccg cgacgccgcg cgccgccaaa gctcccgcca actgcaaaac
     1681 ccggcgctgc gcgccgccgc cggtgggggc gtgcagcagc agcatgacgc gaaggggagg
     1741 gggatcggcc ggcattggga caggctacct ctgggagggg agcatgtccc ctgggcgttg
     1801 gggggacacg acgacagggt gagttgtttg ccgccccgtc attcccgaaa tgagggaggc
     1861 ccgagaccaa ctcgaaacgc catgaccgac gccgtccgca ccctgattga tgccctcgcc
     1921 gccggcgaca atccccatag ccccatcacc atccatggcc cacgtggcgc cgagattcag
     1981 gcgaccacct ggggcgacct ggatggtgag tccacggtgc ttgcccggcg gctgctgtcg
     2041 gccggcttcg cggccggcga ccgcatcggg ctggtggccg acaccgattt gtcgttcctg
     2101 ctgctgttcg tggcgctgca gaaggccggg ctggtgccgg tgccgctgcc cctgcccaac
     2161 gccttcggcg accgcgccgc ccatgccgag cgcatcgagc gcatgctggc ggcggcagg
//
LOCUS       DATIKR010000244         3918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_124788, whole genome shotgun sequence.
ACCESSION   DATIKR010000244 DATIKR010000000
VERSION     DATIKR010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124788"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VLL76_03640"
     CDS             <1..238
                     /locus_tag="VLL76_03640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28618.1"
                     /translation="YEVAKEVRAAKSGLLHAQWRILASAGQVRMAGTFALDAWVREQG
                     LGDTVSSLDLDQLDLAAERLGARVRALKGAKADG"
     gene            231..440
                     /locus_tag="VLL76_03645"
     CDS             231..440
                     /locus_tag="VLL76_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015922997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28619.1"
                     /translation="MADLFPDAPRRPRRVLMHVMDAGSGMIEFACRRCGHNTGWIRDD
                     RTVTENRRGRPCPKCNASPKQASEE"
     gene            443..856
                     /locus_tag="VLL76_03650"
     CDS             443..856
                     /locus_tag="VLL76_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28620.1"
                     /translation="MLTIKDCRPEVQAFAVLMEQQLRRHDAKKGTGGWRDDDPRDLTR
                     HLYSEVNELSQEVNAAVAIGFRDAERWETGHGTVSRRGNNGQLQVADGTYALDSTPER
                     ITRIGEEAAAAANMAMMVADRCGAISSPLQSTDTE"
     gene            862..1383
                     /locus_tag="VLL76_03655"
     CDS             862..1383
                     /locus_tag="VLL76_03655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28621.1"
                     /translation="MATTTYEIVNPSDAYTIIAPDHEVAALACFLLGEGLYAFEPIDG
                     DLPKVPLFLFGGAEEWFEKTFGRTVSDALEARESDLAACLDTVLIGKAADRKAFQKGL
                     DLIDDPAKRIEWRDHWHEERRTSCNNIGARAYKLAEAISNALDNEGGDEEAVMAMDPA
                     KTVYDFICDSSAE"
     gene            1550..1951
                     /locus_tag="VLL76_03660"
     CDS             1550..1951
                     /locus_tag="VLL76_03660"
                     /inference="COORDINATES: protein motif:HMM:NF024776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV28622.1"
                     /translation="MAKPTVSYADLVAAIGEAKTLALSKDRGGRGLYIPSLARLGPSS
                     PVVQLLGVEAAEALARLWPGETIDIPLTQGKRARVWELREGGRSISAIAKEMRCHERT
                     VYNILAAPRPAALGARVEEEPPPLLAYIAKR"
     gene            2058..2537
                     /locus_tag="VLL76_03665"
     CDS             2058..2537
                     /locus_tag="VLL76_03665"
                     /inference="COORDINATES: protein motif:HMM:NF019128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HSV28623.1"
                     /translation="MPFVLPAALAEPVAGYTIEETILARTIYGEASGEKRAGRVAIAN
                     VIMNRVAADLGNDGKPDWWGEGVIEVCLKPWQFSCWNPTDPNRPRILLADRRAHPFGE
                     CLSIAREAVAGRLDDITGGAVQYLNVRLTERLYGSQPNWVSRMRHTVVVGRHHFYAL"
     gene            2552..3160
                     /locus_tag="VLL76_03670"
     CDS             2552..3160
                     /locus_tag="VLL76_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28624.1"
                     /translation="MLSVNGKPWYTSRAIWGGILAMLAPVLALAGYQVTEADQHEIIN
                     LLVAVAEAVAGMMAIVGRVGATSVIKRKPGAPEVVAESTGSANYKPWLPAVLLIAMLA
                     AAGPIACASVEARTPAQHVYAIESDLLVPLSAARAYVTRADADPDAKATIKRLVAGVD
                     DAVTAAQVAARAGDDPTLPAALAAARAVGAELLAYLKLKGVM"
     gene            3160..3357
                     /locus_tag="VLL76_03675"
     CDS             3160..3357
                     /locus_tag="VLL76_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28625.1"
                     /translation="MDANTLRLIDLGLALAAAAASGATDAIEGADLVKRLVAENRDPT
                     DAEWAALNATFKGLTKAIADA"
     gene            3357..3521
                     /locus_tag="VLL76_03680"
     CDS             3357..3521
                     /locus_tag="VLL76_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28626.1"
                     /translation="MPDDGDLALSLQESELMRAIAMVTGRPPRIIEIPPPRYEAQDDG
                     RRAEEMGTDG"
     gene            3514..3912
                     /locus_tag="VLL76_03685"
     CDS             3514..3912
                     /locus_tag="VLL76_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28627.1"
                     /translation="MADVFLKWWPVLVVVLNLFVLWVGWSMRKQFVTNDQFDVFQEKH
                     SKEHDRLDEALARGEREFTLIKTELEHLPTREDLDGIKESLSDLTATMAGLKEAVDGI
                     KKAVSGVQENFQTLIGHELAEARQAKGVKG"
BASE COUNT          699 a         1349 c         1275 g          595 t
ORIGIN      
        1 ctacgaggtc gccaaggagg tccgcgccgc caagtccggc ctgctgcacg cccaatggcg
       61 catcctcgcc agcgccggcc aagtccgcat ggccggcacc ttcgccctcg atgcctgggt
      121 gcgcgaacag ggcctgggcg acaccgtgtc cagcctcgac ctcgatcagc tggacctcgc
      181 ggccgagcgg ctgggggcac gggtgcgggc gctgaaggga gcaaaggccg atggctgatc
      241 tgtttcccga tgccccccgc cggccgcgcc gcgtcctgat gcacgtcatg gatgccggca
      301 gcggcatgat cgagttcgcc tgccgccggt gcgggcacaa caccgggtgg atcagggatg
      361 accggaccgt caccgaaaac cggcgcggcc gcccctgccc gaagtgcaat gcgtccccta
      421 agcaagcgag tgaggagtga ccatgctgac gatcaaggat tgccgaccgg aggtccaggc
      481 cttcgccgtg ctgatggagc agcagcttcg aaggcacgat gccaagaaag gcaccggagg
      541 gtggcgcgac gatgacccgc gcgacctgac gcggcacctc tacagcgagg tcaacgagct
      601 ttcgcaggag gtcaatgctg cggtcgccat cgggttccgc gatgccgagc gctgggaaac
      661 cggtcacggt accgttagcc gccgcggaaa caatggtcaa ctccaagttg ccgacggcac
      721 ctacgccctg gacagcaccc cagagcgcat cacacgcatc ggggaagaag ccgccgccgc
      781 ggccaatatg gcgatgatgg tggctgatcg gtgcggcgca atttcgtccc ctttgcaatc
      841 gactgacacg gagtaaaccc gatggctacg accacctacg agattgtcaa cccgagcgac
      901 gcgtacacga tcatcgcccc agaccacgaa gtggcagcgc tcgcctgctt tctgctgggc
      961 gaggggctgt atgccttcga accgatcgac ggcgatctgc ccaaggttcc gctgttcctg
     1021 tttggcggcg ccgaggagtg gttcgagaag acgttcggac gcactgtctc cgatgcgctt
     1081 gaggcgcgcg agtccgacct tgccgcctgc ttggacacgg tgctgatcgg caaggcagcc
     1141 gaccgcaagg cctttcagaa ggggcttgat ctgatcgacg acccggccaa gcgcattgag
     1201 tggcgcgacc actggcacga ggagcgccgc acctcctgca acaacatcgg cgcccgcgcc
     1261 tataagctgg cggaagccat cagcaacgcc ctcgacaatg aggggggaga cgaagaggcg
     1321 gtgatggcga tggacccggc caaaaccgtc tacgacttca tttgcgacag ctccgccgag
     1381 tagcgtccct taagcaagcg gccacggact aagccggtgg ccgtccccag cgcccagggt
     1441 ccgcgcgccc aacaacccac cccgcaacag gcggcgcaac agggcagtgg gcggttggat
     1501 ttgcagccgc ttctccgccc cgcatccgat ttgaagaggt aaaacggata tggctaaacc
     1561 caccgtcagc tatgccgacc tggtggcggc gatcggcgag gccaagacgc tggcgctgtc
     1621 gaaggatcgc ggcggccggg gcctctacat cccgtcgctg gcgcgcctgg ggccgtcctc
     1681 gccggtggtc cagctgttgg gcgtcgaggc ggccgaggcc ttggcgcggc tttggcccgg
     1741 cgagaccatc gacatcccgc tgacccaggg caagcgcgcc cgggtgtggg aacttcgcga
     1801 gggcggccgc tcgatctcag cgatcgcaaa ggaaatgcgc tgccacgagc gcacagtcta
     1861 caacatcttg gccgcgcccc gtccggccgc tttgggtgcg cgcgtggaag aggagccgcc
     1921 gccgctactt gcgtacatcg ccaaacgctg agatgctggc ctccgttctc tttgacggtt
     1981 ttccctgaaa actctcaggg gtgaagaaaa gcaggctatg ccgcaccctc acggtgtcct
     2041 acccgtgggg gtttttcatg cctttcgtcc ttccggctgc cctggccgaa cccgtcgccg
     2101 gctacaccat cgaggagacc atcctcgccc gcacgatcta cggcgaggcc tcgggcgaaa
     2161 agcgcgccgg ccgcgtcgcc atcgccaacg tcatcatgaa ccgggtcgcc gccgacctgg
     2221 gcaatgacgg caagccggac tggtggggcg agggcgtcat cgaagtctgc ctgaagccgt
     2281 ggcagttctc gtgctggaac cccaccgatc ccaaccggcc ccgcatcctg ctggccgacc
     2341 gtcgtgccca cccgttcggc gaatgcctgt cgatcgcgcg cgaagccgtc gccggccgcc
     2401 tcgacgacat caccggcggc gccgtccagt acctcaacgt ccggctgacc gagcggctgt
     2461 acggctcgca gcccaactgg gtctcgcgca tgcgccacac ggtcgtcgtc ggccgccatc
     2521 acttctacgc cctctagccc cggagcccac attgctcagc gtcaacggca aaccctggta
     2581 caccagccgc gccatctggg gcggcatcct cgccatgctg gcgcccgtcc tggccctggc
     2641 gggctatcag gtcaccgagg ccgaccagca cgaaatcatc aacttgctgg tggcggtggc
     2701 cgaagccgtc gccggcatga tggccatcgt cggccgcgtc ggcgccacca gcgtcatcaa
     2761 gcgcaagccc ggcgcccccg aggtggtcgc ggaatccacg gggtccgcca actataagcc
     2821 gtggctgccg gccgtcctgc tgatcgccat gctcgccgcc gccggcccga tcgcctgcgc
     2881 cagcgtcgag gcgcgcaccc cggcccagca cgtctacgcc atcgaatccg atctgctggt
     2941 gccgctgtcg gccgcccgcg cctacgtcac ccgggccgat gccgacccgg acgccaaggc
     3001 cacgatcaag cgcctggtgg ccggcgtcga tgatgcggtg acggcggccc aggtcgccgc
     3061 ccgtgccggc gacgatccca ccttgcccgc cgccttggcc gccgcccgcg ccgttggcgc
     3121 cgagctgctc gcctacctca agctcaaggg ggtcatgtga tggacgccaa cacgctacgc
     3181 ctgatcgacc ttgggcttgc cctggccgcc gccgctgcca gcggcgccac cgacgccatc
     3241 gagggcgccg acctggtcaa gcgcctggtc gccgaaaacc gcgaccccac cgacgccgaa
     3301 tgggcggcgc tcaacgcgac gttcaagggc ctgaccaagg ccatcgcgga cgcctgatgc
     3361 cagacgacgg cgacctggcg ctgagcctgc aggagtccga gctcatgcgg gccatcgcca
     3421 tggtcaccgg ccggccgccc cggatcatcg agatcccgcc gccgcgatat gaagcacaag
     3481 acgacggccg acgggccgag gagatgggga cggatggctg acgtcttttt gaaatggtgg
     3541 ccggtgctgg ttgttgtcct caaccttttc gtgctgtggg tcggctggtc gatgcgcaag
     3601 caattcgtca ccaacgacca attcgacgtg ttccaggaaa agcattcgaa ggaacacgac
     3661 aggctggatg aggcgctggc caggggcgaa cgcgaattca cgctgatcaa gaccgagctg
     3721 gagcatctgc ccacccgcga ggacttggac ggcatcaagg aaagcctgtc cgacctgacg
     3781 gcgaccatgg ccggcctgaa agaggccgtg gatggcatca agaaggcggt gagcggcgtt
     3841 caggaaaatt tccagacgct gatcggccac gagttggccg aggcgcgcca ggccaagggg
     3901 gtcaagggat gaatttcg
//
LOCUS       DATIKR010000245         3684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_64677, whole genome shotgun sequence.
ACCESSION   DATIKR010000245 DATIKR010000000
VERSION     DATIKR010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3684
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64677"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VLL76_03690"
     CDS             complement(<1..537)
                     /locus_tag="VLL76_03690"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018013907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HSV28628.1"
                     /translation="MSANSNILEKTVIDVHHWTESLFTLKLKRDPGFRFDNGQFAMIG
                     LMVDGKPIMRAYSMVSANYEEHLEFLSIKVPNGPLTSRLQHVKPGDTILVNKKTTGTL
                     ILDNLLPGRNLYLLSTGTGLAPFLAIIKDPETYERYERVILTHSCRHVRELVYEDFIR
                     QDLPNNEFFGEQAAHKLTY"
     gene            complement(759..1532)
                     /locus_tag="VLL76_03695"
     CDS             complement(759..1532)
                     /locus_tag="VLL76_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HSV28629.1"
                     /translation="MVRIATWNVNSVRTRLPNVLDWLRASQPDVLLLQEIKCQDDQFP
                     AMEFQAEGYRAEVHGQKSYNGVAILSKLPMTDVVRGLPENDGDEQSRYIEATIAGLRV
                     ASIYLPNGNPAPGDKFDYKLRWMRRLVVHAKALLATEQPFVLAGDYNICPTDDDVYDP
                     PNWQADALCRPESRALFRQLCHLGLTDAFRALHPEPHRYTFWDYQAGAWQRDLGLRID
                     HLLLSPQAADRLVACDIDKGPRGCDKASDHTPIWVELRE"
     gene            1610..2239
                     /locus_tag="VLL76_03700"
     CDS             1610..2239
                     /locus_tag="VLL76_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28630.1"
                     /translation="MLLWPGVALAQCPAPGMAKTAPVTFKTELAEPVYRNDRKRDELT
                     TSSADALGTPEVQKSGLTRVQFRFEVVPSFQWVALPDGRTCMALKEVQATWRMTDLVV
                     DVAAEYRPGTCQYREVRAHEDQHVRFNRDTFLEHAPRMEARLKTVAHDMRPTITDLDP
                     ERTMQAMAERLSHAAGEVQASFEAAIAARHATIDTAESYKAVSRRCDKW"
     gene            complement(2343..2681)
                     /gene="erpA"
                     /locus_tag="VLL76_03705"
     CDS             complement(2343..2681)
                     /gene="erpA"
                     /locus_tag="VLL76_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HSV28631.1"
                     /translation="MADAPRITVTANAAKRVAKLIEMEGKPSLMLRLGVSGGGCSGFQ
                     YGITLDDAVNDDDVISEQHGIKLVVDQTSLDLLAGAEVDFVEDLVGSSFQIRNPNASS
                     TCGCGSSFSV"
     gene            2807..>3684
                     /locus_tag="VLL76_03710"
     CDS             2807..>3684
                     /locus_tag="VLL76_03710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HSV28632.1"
                     /translation="MTATLPSRSAILAPFACRAETSRGRLNPEPESPTRTPFQRDRDR
                     IIHSAAFRRLQYKTQVFVYHEGDNFRTRLTHSLEVSQIARSISRVVGLDEDMAESLAL
                     AHDLGHTPFGHAGEDALTECLAEFGGFDHNAQSLRVVTKLERRYVEFDGLNLTWETLE
                     GLVKHNGPLTGPLAKKQAPLPGAITEYVARHDLELDTFAGAEAQVAALADDIAYNNHD
                     IDDGLRAGLFTIEDLKDVPLVGPVFHQVAEEYPGIDPSLHIHESVRRMIGLMILDCIK
                     ETQRRIAEFQPKSADDV"
BASE COUNT          655 a         1163 c         1230 g          636 t
ORIGIN      
        1 ataggtcagc ttgtgggcgg cctgctcgcc gaagaactcg ttgttgggca ggtcctggcg
       61 gatgaaatcc tcgtagacca gctcgcggac gtggcggcag gaatgggtca ggatgacccg
      121 ctcatagcgc tcgtaggtct cggggtcctt gatgatcgcc aggaacggcg ccagcccggt
      181 gccggtcgac agcaggtaga ggttccgccc cggcagcagg ttgtccagga tcagcgtgcc
      241 cgtggtcttc ttgttgacca ggatggtgtc gcccggcttg acgtgctgca gccgcgaggt
      301 cagggggccg ttcggcacct tgatcgacag gaattccagg tgctcctcgt aattggcgct
      361 gaccatggaa taggcccgca tgatcggctt gccgtccacc atcagcccga tcatcgcgaa
      421 ctggccgttg tcgaagcgga accctgggtc gcgcttcagc ttcagcgtga acagcgactc
      481 ggtccagtga tggacgtcga tgacggtctt ttccaggatg ttcgaattcg cggacatggg
      541 ccgaaatcac cattgtggca aagaggggtg acgcccatat gtgatagcga tgttgataat
      601 cataatcaac acataaaaat gcatactcta ggcatgtttg acagcatcct catggagaat
      661 agtcatcccg ggcttgaccc gggatccatc tgctaggcgg caccacggat cccggctcag
      721 cgcttcgctt ggccgggatg acagaaagcg cgaaccggct actcccgcaa ctccacccag
      781 atcggcgtat ggtcgctggc cttgtcgcag ccgcgaggtc ccttgtcgat gtcgcaggcg
      841 accaggcggt cggcggcctg gggcgacagc agcaggtggt cgatgcgcag gccgaggtcg
      901 cgctgccagg cgccggcctg gtaatcccag aaggtatagc ggtgcggctc gggatgcagg
      961 gcgcggaagg cgtcggtcag gccgagatgg cacaattggc ggaacagggc gcggctttcc
     1021 gggcggcaca gggcgtccgc ctgccagttg ggcggatcgt agacgtcgtc gtcggtgggg
     1081 cagatgttgt agtcgccggc cagcacgaag ggctgttcgg tcgccagcag ggccttggcg
     1141 tgcacgacca ggcggcgcat ccagcgcagt ttgtagtcga acttgtcgcc cggcgccggg
     1201 ttgccgttgg gcaggtagat cgaggcgacg cgaagtccgg cgatggtggc ttcgatgtag
     1261 cgcgattgct cgtcgccgtc attctcgggc aggccgcgca ccacgtcggt catgggcagc
     1321 ttcgacagga tggcgacgcc gttgtagctt ttctggccgt gcacctcggc ccggtagccc
     1381 tcggcctgga attccatggc cgggaactgg tcgtcctggc acttgatctc ctgcagcagc
     1441 agcacgtcgg gttggctcgc gcgcagccag tccagcacgt tgggcaggcg ggtcctgacg
     1501 gagttgacgt tccaggtggc aatgcggacc atggggcctc aaggatgtga aggacgaacg
     1561 gatggccttt atagcggcaa gcggatgcgt ccgtcatggt ttggcggcgt tgctgctgtg
     1621 gccgggcgtc gccttggcgc aatgcccggc gcccggcatg gcgaaaaccg cgccggtcac
     1681 gttcaagacc gaattggccg aacctgtcta tcgcaacgac cgcaagcgcg atgagttgac
     1741 cacgtcctcg gccgacgcac tgggcacgcc cgaagtgcag aagtcgggcc tgacccgcgt
     1801 gcagttccgc ttcgaggtgg tgccgtcgtt ccaatgggtg gcgctgcccg atggccgcac
     1861 ctgcatggct ttgaaggagg ttcaggcgac ctggcgcatg accgatctgg tggtggacgt
     1921 ggccgccgaa taccgccccg gaacctgcca gtatcgcgag gtccgcgccc acgaggacca
     1981 gcatgtccgc ttcaaccgcg acaccttcct ggaacacgcg ccgcgcatgg aggcccggct
     2041 caagaccgtc gcgcacgaca tgcgccccac gatcaccgac ctcgaccccg agcggaccat
     2101 gcaggccatg gccgaacgcc tgagccacgc agcgggcgag gtgcaggctt cgttcgaggc
     2161 ggcgatcgcc gcgcgccatg ccaccatcga caccgccgag agctacaagg cggtgtcgcg
     2221 gcggtgcgac aagtggtgaa aaattggctg tcatgctgag caaagcgaag catctttcac
     2281 gcagggcggc gaccgcatcg ggtgaaagat ccttcgcctg cggctcagga tgacacggga
     2341 gatcagacgc tgaagctgga gccgcagccg caggtcgagc tggcgttggg gttgcggatt
     2401 tggaaggagg agccgaccag gtcttccacg aaatccactt ccgcgccggc cagcaggtcc
     2461 agcgaggtct ggtcgacgac cagcttgatg ccatgctgtt cggaaatcac gtcgtcgtcg
     2521 ttgacggcgt cgtccagggt gatgccgtac tggaagcccg agcagccgcc gcccgagacg
     2581 ccgaggcgca gcattaggct gggcttgccc tccatttcga tcagcttggc aacgcgcttg
     2641 gcggcgttgg cggtaacggt gatacggggc gcgtcggcca tgtcacgaag tccttgaatt
     2701 ggggggcggc ggaaagcttg ccgaaattat ctcgggcgct acgccgaaat gtcaatgtaa
     2761 gggtggcagg ttgcgttcca cccgcccgcc gggtagtgtc ccgctcatga ccgcgacact
     2821 gccgtcccgc tccgccatcc tcgcgccctt cgcctgccgg gcggagacgt cgcgcggccg
     2881 cctcaacccc gagccggaaa gcccgacgcg cacgccgttc cagcgcgacc gcgaccgcat
     2941 catccactcg gccgcctttc gccgcctgca atacaagacg caggtcttcg tctatcacga
     3001 gggtgacaac ttccgtaccc gcctgaccca ctcgctggaa gtgtcgcaga tcgcgcgctc
     3061 gattagccgc gtggtgggac tggacgagga catggcggaa tcgctggcgc tggcccacga
     3121 tctcggccac accccgttcg gccatgccgg cgaggacgcg ctgaccgaat gcctggccga
     3181 attcggcggc ttcgaccaca acgcccagtc cctgcgcgtc gtcaccaagc tggaacgccg
     3241 ctacgtcgag ttcgacggcc tcaacctgac ctgggagacg ctggaaggcc tggtcaagca
     3301 caacggcccg ctgaccgggc cgctggcgaa gaagcaggcg ccgctgcccg gcgccatcac
     3361 ggaatatgtg gccaggcacg atctggagct ggacaccttc gccggcgccg aggcgcaggt
     3421 ggcggccttg gccgacgaca tcgcctacaa caaccacgac atcgacgacg gcctgcgcgc
     3481 cggcctgttc accatcgagg acctcaagga cgtgccgctg gtcggtcccg tcttccatca
     3541 ggtcgccgag gaatatcccg gcatcgatcc cagcctgcac atccatgaat cggtgcgccg
     3601 catgatcggc ctgatgatcc tggactgcat caaggagacc cagcgccgca tcgccgagtt
     3661 ccagcccaaa tcggccgacg acgt
//
LOCUS       DATIKR010000246         3141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_160916, whole genome shotgun sequence.
ACCESSION   DATIKR010000246 DATIKR010000000
VERSION     DATIKR010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160916"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VLL76_03715"
     CDS             complement(<1..598)
                     /locus_tag="VLL76_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSV28633.1"
                     /translation="MLRFLALVFSLLTLLAIAGAGGALYLFWHYGQGLPDYHQLAHYE
                     PPITTRVYGGDGRLVAEYAVEKRAFVPLDAIPQRIKDAFLSAEDKSFYEHPGVDFFGI
                     ARAVAINLRNKGLGADRRPVGASTITQQVAKNFLLTNEVSVERKIKEAILAFRIERAF
                     TKDHILELYLNEIYLGGGSYGVAAAAANYFNRGLDELSI"
     gene            complement(666..2207)
                     /locus_tag="VLL76_03720"
     CDS             complement(666..2207)
                     /locus_tag="VLL76_03720"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSV28634.1"
                     /translation="MAVLAALVAALATFGAQAATAVTATRLGIHPDGVTRFVMDLSDR
                     LDFTVSSHADPMRIVVNTDGLAWSAPAIPAKTIGSVARLKEENGRIVLTLAEPAEVKT
                     AFVIPPRDGLGWRFVMDLKQTTKVAFLASAKPAAAKVAKATPVRAEPVRAEPVRAVEP
                     APAPTPAPVAERQPQQPIVLLSPAAEAQAQAQAPAPMPVAAPPPQPAPAPVRLAAPEP
                     RPAKGTAILSAAMPPPMERPVATPAVMTAPAPEPMTAAPAMVTKVAATIPAPEPEAKG
                     PSKNGDGRPVIVLDPGHGGVDPGAIGVSGVYEKFITLAAARELKEQLERSGRYKVHLT
                     RDRDIFIRLRDRVALARQYNADLFISLHADAVQNPQIKGLSVYTLSQNASDAEAAALA
                     DKENKVDLIAGIDLSHESADVANILIDLAQRETLNRSAGFAGGIVDELGREITLLNNT
                     HRFAGFAVLKAPDVPAVLIELGYLSNEYEERNLRQPVYREKIAKSISRAIDGFFLQGQ
                     KAKRP"
     gene            2718..>3141
                     /locus_tag="VLL76_03725"
     CDS             2718..>3141
                     /locus_tag="VLL76_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HSV28635.1"
                     /translation="MVKRMLIDATHPEETRVVVVNGTRLEELDVETSTKKQLKGNIYL
                     AKVVRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYFQIPVADRQALLAAQRAESMRDGN
                     GDSHDDHEAPAEAAEAPAAAAEGGEEGGTVEQVAKPTNV"
BASE COUNT          503 a         1001 c         1116 g          521 t
ORIGIN      
        1 cgatggacaa ttcgtccagg ccgcggttga agtagttggc cgccgccgcc gccacgccgt
       61 aagagccgcc gccgagatag atctcgttca ggtacagctc gaggatatgg tccttggtga
      121 aggcgcgctc gatacggaag gccaggatgg cctccttgat cttgcgctcg accgacacct
      181 cgttggtcag caggaagttc ttagccacct gctgggtgat ggtcgaggcg cccaccggcc
      241 ggcggtcggc gcccaggccc ttgttgcgca ggttgatggc gaccgcgcgg gcgatgccga
      301 agaaatcgac gccgggatgc tcgtagaagc tcttgtcctc ggccgacagg aaggcgtcct
      361 tgatccgctg cgggatggcg tccagcggca cgaaggcgcg cttttccacc gcgtattccg
      421 ccaccagccg gccgtcgccg ccatagacgc gggtggtgat gggcggttcg taatgggcga
      481 gctggtggta gtccggcagg ccttggccgt aatgccagaa caggtacaac gcaccgcccg
      541 cgccggcgat ggccagcagg gtcagcagac tgaaaacgag cgctaggaaa cggagcatct
      601 tttcaacacc gggccgccgg tcacgggcgg tcgtaccgcg cgccggccgt tcacgtcaag
      661 gtcggtcagg ggcgcttggc cttttgccct tgcaggaaga agccgtcgat ggcccgcgag
      721 atcgacttgg cgatcttctc gcgatagacg ggctggcgca ggttgcgctc ttcgtattcg
      781 ttggacagat agcccagttc gatcagcacc gccggcacgt cgggcgcctt cagcacggca
      841 aagccggcga agcggtgggt gttgttcagc agcgtgatct cgcggcccag ttcgtcgacg
      901 atgccgccgg cgaacccggc cgaacggttc agggtctcgc gctgcgccag gtcgatcagg
      961 atgttggcga cgtcggccga ttcgtgggac aggtcgatgc cggcgatcag gtcgaccttg
     1021 ttttccttgt cggccagcgc ggcggcctcg gcgtccgagg cgttctgcga cagggtatag
     1081 accgacaggc ccttgatctg cgggttctgc accgcgtcgg catgcagcga gatgaacagg
     1141 tcggcgttgt actgccgcgc cagggcgaca cggtcgcgca ggcggatgaa gatgtcgcgg
     1201 tcgcgggtca ggtgcacctt gtagcggccg gaccgctcca gttgctcctt gagttcgcgc
     1261 gccgccgcca gggtgatgaa cttctcgtac acgcccgaca cgccgatggc gcccgggtca
     1321 acgccgccat ggccgggatc gagcacgatc accgggcggc cgtcgccgtt cttgctcgga
     1381 cccttggcct cgggctcggg cgccgggatg gtggcggcga ccttggtcac catggccggg
     1441 gcggcggtca tcggttcggg cgccggggcg gtcatcaccg ccggggtggc gaccgggcgt
     1501 tccatgggcg gcggcatggc cgcgctgaga atcgcggtgc ccttggccgg gcgcggctcg
     1561 ggggccgcca gtcgcaccgg cgcgggggcc ggctggggcg gcggcgcggc caccggcatc
     1621 ggggcggggg cctgcgcctg tgcctgcgcc tcggcggcgg gcgacagcag gacgatgggt
     1681 tgctgcggct ggcgttcggc cacgggagcc ggagtcgggg cgggcgccgg ttcgacggcg
     1741 cgcacgggtt cggccctcac gggttcggcc cgcacgggag tcgccttggc gaccttggcg
     1801 gcagccggct tggccgaggc caggaaggcg accttggtgg tctgcttcag gtccatcacg
     1861 aagcgccagc ccaggccgtc gcgcggcggg atgacgaagg cggtcttgac ctcggccggc
     1921 tcggccaggg tcaggacgat gcggccgttc tcttccttca ggcgggcgac cgagccgatg
     1981 gtcttggccg gaatggcggg tgccgaccac gccaggccgt cggtgttgac gacgatgcgc
     2041 atggggtcgg catggctgct gaccgtgaag tccaggcggt cggaaaggtc catgacgaaa
     2101 cgggtgacgc catcgggatg gatgcccaga cgggtggcgg tcacggccgt cgcggcctgg
     2161 gcgccgaacg tcgccagtgc cgccacaagg gccgccagaa ctgccattac cggccgaaag
     2221 ccgcgaaatc gttgggtcat gcgctccatt ctcgccgaac cttattaaag cgagcgttaa
     2281 cacgtatagc gcagattctc cctcaacttc aatccaaaag gtattgattc cacagactct
     2341 tccggccagc ggcattgacc gcgggcctag atcggcccat catccgggga aggccaacaa
     2401 gatcattgtc gaaactttcg gctatggtta ttttggctgc gcaagctcgt agaccgagcg
     2461 tccgtccttg ggcgggccgc ctgccccgcg ctccccgatg tcagagcgca gcgtggcgtg
     2521 ggtggcagat ttggtctgcg tatttcgacc acgacctttt cgaagccggg cgcgacgccc
     2581 gtcacaggtt cccgcaatga acggtacttt ccaggattgc agcatggaat cgaccgcagg
     2641 cgccgccggc ttcgcttgtg aacaaacccg ccgtgcgcgc tcttgcgcgc aggcggcgcc
     2701 acggagatat ggacttaatg gtaaagcgta tgctgatcga tgccacgcac ccggaggaaa
     2761 cccgggtcgt cgtggtcaat ggcacccgtc ttgaagagct ggacgtcgag accagcacca
     2821 agaagcagct gaagggcaac atctacctcg ccaaggtggt ccgcgtggag ccttcgctcc
     2881 aggcggcgtt cgtggaatac ggcggcaacc gccacggatt cctggccttc agcgaaatcc
     2941 acccggatta tttccagatc ccggtggccg accgccaggc cctgctggcc gcccagcgcg
     3001 ccgaatccat gcgcgacggc aacggcgact cgcatgacga ccacgaggcg cccgccgagg
     3061 ccgccgaggc tcccgccgcc gccgccgagg gcggcgagga aggcggcacc gtcgagcagg
     3121 tcgccaagcc gaccaacgtc g
//
LOCUS       DATIKR010000247         5419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_233605, whole genome shotgun sequence.
ACCESSION   DATIKR010000247 DATIKR010000000
VERSION     DATIKR010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5419
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233605"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VLL76_03730"
     CDS             complement(<1..1199)
                     /locus_tag="VLL76_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28636.1"
                     /translation="MTLRVLTLFVLLALAPAAWAQSTPRAASHDNFGRMVFDWDGPVR
                     WSADVQGSDLVLRFEKPVAGDPRSLLKPLAKYLKTVTVSPDRRMLTFPLAVPVQLKTF
                     TTGNSTVIDLTEAKGQPPAAPAPAAAAPAPAAPAKAPAAAAPEPPVDLNVRGGEHTGF
                     NRLVFDWPKQVGYTVNLSNGRVMIGFDRAAKVNATALEASLPADVKFVEAKPQGGGTV
                     VVLALPPDMRVRHFTSGPRVAVDLVRPAGSAPPARVAGAAPPLAPAPGTGELPEKPAP
                     TQPAPTLPAEAVAKALPQPANGTPATPAAAPVQAAAPAKTTVSLGVPFDQPTAAAAFR
                     RAGWLWLVFDRKVEVDTKLLKKTGGDVVTHVEQVENVAGGTAIRMITQPGYNPSIRKE
                     GLLWVFDL"
     gene            complement(1297..1869)
                     /locus_tag="VLL76_03735"
     CDS             complement(1297..1869)
                     /locus_tag="VLL76_03735"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008622551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HSV28637.1"
                     /translation="MKVDQIAEVVRAMLDTMTGDISSSDIKLYREIESLADYIHAAKA
                     EIAALRPGEITNDFIASATDELDAIVGATEAATNEIMDSAEHLESLTPMMDQEVADRL
                     TAITTRIFEACTFQDITGQRITKVVKVLKEIETRVEHLVKAFGTDIAEAEAPAKAKDT
                     VTDEDLLNGPQLPSDAADQAEIDRLLASFD"
     gene            complement(1974..2360)
                     /locus_tag="VLL76_03740"
     CDS             complement(1974..2360)
                     /locus_tag="VLL76_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28638.1"
                     /translation="MAVDKNMNVLIVDDYKTMLRIIRNLLKQLGFNNVDEATDGSMAL
                     QMLRVGNYGLIISDWNMEPMTGLQLLREVRADAKLKPIPFIMVTAESKSENVIAAKEA
                     GVSNYIVKPFNAETLKTKMSSVLGDF"
     gene            complement(2491..3255)
                     /locus_tag="VLL76_03745"
     CDS             complement(2491..3255)
                     /locus_tag="VLL76_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28639.1"
                     /translation="MAQPKSKPKPKAKAKPKDATGRTPFLRVLPALILVGALMLSVRI
                     NDIRKGFLDLASVRLTSELNAQQAATRAPEQVAQAQPAPAPAAPAADKAAPAPAAQSP
                     APAPAADQGNLTQTEMDVLQKLSDRRGVLDTRERDIERREALLKAAESQIDRKIAEMK
                     TLQNTIEGLLRQYNEQEDNKMRSLVKIYENMKPKEAAKIFEQLDMPILLEVVERMKEQ
                     RVAPILADMDPAKARIVTSELAQRRQIPTPKPANGG"
     gene            complement(3264..3758)
                     /locus_tag="VLL76_03750"
     CDS             complement(3264..3758)
                     /locus_tag="VLL76_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6468 domain-containing protein"
                     /protein_id="HSV28640.1"
                     /translation="MDWKIALDLLVSVLLIATIGYAVILNSRLTALRKNRDDLAKIIV
                     AFNEATVRAEASIPKLKKAAEDAGLGLQERVEKAQSLRDDLAFMIERADTMANRLENG
                     VRSARTEVRAPQAAAPARVGGGGGSKAAQQATVAAAAAASDVDVDERSEAERELLRAL
                     QSMR"
     gene            complement(3761..4933)
                     /gene="fliM"
                     /locus_tag="VLL76_03755"
     CDS             complement(3761..4933)
                     /gene="fliM"
                     /locus_tag="VLL76_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HSV28641.1"
                     /translation="MAMDDEGGGPRSSDDEEALMREWAAMAGGDDAGGGGGGGGEEGD
                     AMAAEWEAMLGAGDGDAGGGEAVPKDATRVLNQDEIDSLLGFDDDHGRGDDKSGIQAI
                     LNSALVSYERLPMLEVVFDRLVRMMSTSMRNFTSDNVEVSLDNILSLRFGDYLNSIPL
                     PAMLAVFKAEEWDNFGLLTVDSSLIYSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVE
                     RMVHVVLSDLSAAFDPLSPVTFRFDRLETNPRFATISRPSNAAIVAKLRIDMEDRGGR
                     LELMLPYATLEPVRELLLQMFMGEKFGRDSIWETHLAEELWLTEVEIEAVLDEQVMGL
                     REVLGWKPGSKMMLNSTPQSSIDLRCGDISMFRGKMGRKGQHIAIRVDEKLLKGRN"
     gene            complement(4956..>5419)
                     /locus_tag="VLL76_03760"
     CDS             complement(4956..>5419)
                     /locus_tag="VLL76_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HSV28642.1"
                     /translation="KKLPIKKILIIVLPILLLIGAGAGLYFTGVVDMLLGGSGQSASA
                     PQQPKTIQPAVFHDIPEMLVNLQSQGRKQAFLKIRVALELESELDKPKIDQVMPRIVD
                     AFQVYLRELRIEDLQGAAGMHLLREELLTRVNAAAKPTKVNDVLFREMLVQ"
BASE COUNT          822 a         1784 c         1835 g          978 t
ORIGIN      
        1 aggtcgaaca cccacagcag gccttccttg cggatcgacg gattgtagcc gggctgggtg
       61 atcatgcgga tggcggtgcc gccggccacg ttctcgacct gctcgacatg ggtcaccacg
      121 tcgccaccgg tcttcttcaa cagcttggtg tcgacctcga ccttgcggtc gaacaccagc
      181 cacagccagc cggcacggcg aaaggcggcg gcggcggtgg gctggtcgaa cggcacgccc
      241 aggctgacgg tggtcttggc cggagcggcg gcctgcaccg gcgcggcggc gggggtggcg
      301 ggggtgccgt tggccggctg cggcaacgcc ttggccaccg cctcggccgg caaggtcggc
      361 gccggctggg tgggagccgg cttctccggc aactcgccgg tgcccggcgc gggggccagc
      421 ggcggcgcgg caccggcgac gcgggcgggc ggggcactgc cggcgggacg aaccaggtcc
      481 accgcgacac gcgggccgct ggtgaagtgg cgcacccgca tgtcgggcgg caacgccagc
      541 accaccacgg tgccgccgcc ctgcggcttg gcctcgacga acttgacgtc ggcgggcagc
      601 gacgcctcca gcgcggtggc gttgaccttg gccgcgcggt cgaagccgat catcacgcgg
      661 ccgttcgaca ggttgacggt gtaacccacc tgcttcggcc agtcgaacac caggcggttg
      721 aagccggtat gctcgccgcc gcgcacgttg aggtccaccg gcggttccgg cgcggcagcc
      781 gccggggcct tggccggggc ggcgggtgcc ggcgcggctg cggccggagc cggcgcggcc
      841 ggcggctggc ccttggcttc ggtcaggtcg atgacggtgg aattgccggt ggtgaaggtc
      901 ttgagctgga ccgggaccgc cagcgggaag gtcagcatgc ggcggtcggg gctgacggtg
      961 acggtcttga ggtatttcgc cagcggcttc agcaggctgc gcggatcgcc ggctaccggc
     1021 ttttcgaagc gcagcacaag gtcggagccc tggacgtcgg ccgaccaccg caccgggccg
     1081 tcccagtcga acaccatgcg gccgaaattg tcgtggctgg cggcgcgcgg cgtcgattgc
     1141 gcccaggccg cgggggcgag cgccagaagc acgaaaaggg taaggacgcg cagggtcacg
     1201 aaccagcctt ggccgaaagc gataccccat ttgtaaccca agctgtgcgc atcggtcacc
     1261 ggcgcatcgg tggagtcgcc cggggcgtcc atcagcttag tcgaagctcg cgagcagccg
     1321 gtcgatctcg gcctggtcgg cagcgtccga ggggagctgc gggccgttga gcaggtcctc
     1381 gtcggtgacc gtgtccttgg ccttggcggg cgcctcggct tcggcgatgt cggtgccgaa
     1441 cgccttgacc aggtgctcga cccgggtctc gatctccttc aggaccttga ccaccttggt
     1501 gatgcgctgg ccggtgatgt cctggaaggt gcaggcttcg aagatgcggg tggtgatggc
     1561 ggtcagccgg tcggccactt cctggtccat catgggcgtg agcgactcga ggtgctcggc
     1621 cgaatccatg atttcgttgg tggcggcctc ggtggcgccg acgatggcgt ccagctcgtc
     1681 ggtggccgag gcgatgaagt cgttggtgat ctcgccgggc ctgagcgcgg cgatctcggc
     1741 cttggccgcg tggatgtagt cggccagcga ctcgatctcg cggtacagct tgatgtcgga
     1801 cgacgagatg tcgccggtca tggtgtcgag catggcccgc accacttcgg cgatctggtc
     1861 gaccttcacg gaatcgccat ggtcacggcg aatggcatcg agacgaagcg cgaggtctcg
     1921 gtcgacacct ttcgccgcca tggcggatcc tcccccagat taagcgtgcg cgatcagaaa
     1981 tcgcccagca cgctcgacat cttggtcttc agcgtctcgg cgttgaacgg cttgacgatg
     2041 taattcgaca cgccggcttc cttcgccgcg atcacgtttt ccgacttcga ctcggccgtc
     2101 accatgatga acgggatcgg cttcagcttg gcgtcggcgc gaacctcgcg cagcaactgc
     2161 aggccggtca tcggttccat gttccagtcg gaaatgatga ggccgtaatt gccgacgcgc
     2221 agcatctgca gcgccatcga gccatccgtg gcttcgtcga cgttgttgaa gccaagctgc
     2281 ttgagcagat tgcggatgat ccgcagcatc gtcttgtaat cgtcaacgat caagacgttc
     2341 atattcttgt cgacagccat caaccagctc cttcgaacca ctagccgcca cgaagcgtta
     2401 accccgccag gccgcgagtt ttcctagtta agataggggg gcactatcgc gcaaggcatt
     2461 tttccgctcc cccccggtta aaacgtaata tcaccccccg ttcgcgggtt tgggggtagg
     2521 aatttgtcgc cgctgcgcca gttcagaggt gacgatgcgc gccttggcgg ggtccatgtc
     2581 ggcaagaatc ggagcgactc gctgctcctt catccgttcg accacttcca gcaggatggg
     2641 catatccaac tgctcgaaga tcttggccgc ctccttgggc ttcatgtttt cataaatctt
     2701 caccaacgag cgcatcttgt tgtcttcctg ctcgttgtat tgccgcagca ggccctcgat
     2761 ggtgttctgc agcgtcttca tctcggcgat cttgcggtcg atctggcttt cggccgcctt
     2821 cagcagggcc tcgcgccgct cgatgtcgcg ctcgcgcgtg tccagcacgc cgcgccggtc
     2881 ggacagcttc tgcagcacgt ccatctcggt ctgggtcagg ttgccctggt ccgccgccgg
     2941 agccggggcc ggcgactggg ccgccggagc gggcgccgcc ttgtccgccg ccggggcggc
     3001 gggagcggga gccggctgcg cctgcgccac ctgctcgggg gcacgggttg ccgcctgctg
     3061 cgcgttcagc tcgctggtca gccgcaccga ggcgaggtcg aggaagccct tgcgaatgtc
     3121 gttgatgcgc accgacagca tcagggcgcc gaccaggatc agcgccggca gcacccgcag
     3181 gaacggcgtg cgcccggtgg cgtccttggg tttcgctttc gccttgggct tcggcttgga
     3241 tttgggctgg gccatggcgc gcctcaccgc atcgactgga gcgcgcgcaa cagctcgcgc
     3301 tcggcttcgg accgctcgtc cacatcgacg tcgctggccg ccgcggcggc cgccacggtg
     3361 gcctgctgcg ccgccttgga accaccaccg ccgccgaccc gtgccggagc cgccgcctgg
     3421 ggcgcccgca cctcggtccg ggccgagcgc acgccgttct caagccggtt ggccatggtg
     3481 tcggcgcgtt cgatcatgaa ggccaggtcg tcgcgcagcg actgcgcctt ctcgacccgc
     3541 tcctgcagcc ccaggccggc atcttcggcg gccttcttca gcttggggat cgacgcctcg
     3601 gcgcgcacgg tcgcctcgtt gaaggcgacg atgatcttgg ccaggtcgtc gcggttcttg
     3661 cggagcgccg tcagccgcga gttcaggatc accgcgtagc cgatggtggc gatcagcaga
     3721 accgagacaa gcaggtcgag cgcgattttc cagtccatcg tcagttcctg cccttcaaca
     3781 gcttctcgtc cacacggatg gcgatgtgct ggcccttgcg gcccatcttg ccacggaaca
     3841 tggagatgtc gccgcagcgc aggtcgatgg aggattgcgg cgtcgagttg agcatcatct
     3901 tggagccggg cttccagccc agcacctcgc gcaggcccat cacctgctcg tccagcaccg
     3961 cctcgatctc gacctcggtc agccacagct cttcggccaa gtgggtttcc cagatcgagt
     4021 cgcggccgaa cttttcaccc atgaacatct gcagcagcag ctcgcggacc ggttccaggg
     4081 tggcgtaggg cagcatcagc tccaggcgcc cgccgcgatc ctccatgtcg atgcgcagct
     4141 tggcgacgat ggcggcgttg ctggggcgcg agatggtggc aaagcgcggg ttggtttcca
     4201 ggcggtcgaa gcggaaggtc accggcgaca gcgggtcgaa ggcggcagac aggtccgaca
     4261 gcaccacgtg caccatgcgc tcgaccaggt tgcgttcgat ggtggtgtag gggcggccct
     4321 cgatacgcat ggccgccgtg ccgcgacggc cgcccagcag cacgtcgacg atggagtaga
     4381 tcagcgacga atcgacggtc agcaggccga aattgtccca ttcctcggcc ttgaacaccg
     4441 ccagcatggc cggcagcggg atcgagttca ggtagtcgcc gaagcggagc gacaggatgt
     4501 tgtcgagcga cacctcgacg ttgtccgagg tgaagttgcg catggatgtc gacatcatgc
     4561 gaacgaggcg gtcgaacacc acctcgagca tgggcagacg ttcataggac accagcgccg
     4621 agttgaggat ggcctggatg cccgacttgt cgtcgccgcg cccgtggtcg tcgtcgaagc
     4681 ccagcagcga gtcgatttcg tcctggttca gcacgcgggt ggcgtccttg ggcacggcct
     4741 cgccgccgcc cgcgtcgccg tcgccggcgc ccagcatggc ctcccactcg gcggccatgg
     4801 cgtcgccttc ctcgcccccg ccgccgccac cgccgccggc atcgtcgcct ccggccatgg
     4861 cagcccattc ccgcatcagg gcttcttcgt catcggagga gcggggaccg cccccttcgt
     4921 catccatcgc catggctgtc gcctaatcgc tctttctatt gaacgagcat ttcgcggaac
     4981 agaacgtcat tgaccttggt cggcttggcc gccgcgttga cgcgggtcag caactcctcg
     5041 cgcagcaaat gcatgccggc ggcgccctga aggtcctcga tgcgcaattc gcgcaggtag
     5101 acctggaagg cgtcgacgat gcgcggcatc acctggtcga tcttcggctt gtccaattcg
     5161 ctttccaatt cgagcgcgac gcggatcttg aggaacgcct gcttgcgtcc ctgcgactgc
     5221 aggttcacca gcatctcggg gatgtcgtgg aacaccgccg gctggatcgt cttgggctgc
     5281 tgcggcgccg acgccgactg accgctgccg cccagcagca tgtcgaccac gccggtgaaa
     5341 tacagacccg cgccggcacc gatcagcagc aggatcggca ggacgatgat caggatcttc
     5401 ttgatcggga gcttctttg
//
LOCUS       DATIKR010000248         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_51973, whole genome shotgun sequence.
ACCESSION   DATIKR010000248 DATIKR010000000
VERSION     DATIKR010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51973"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /gene="draG"
                     /locus_tag="VLL76_03765"
     CDS             <1..908
                     /gene="draG"
                     /locus_tag="VLL76_03765"
                     /EC_number="3.2.2.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047407 - ADP-ribosyl-[dinitrogen
                     reductase] hydrolase activity [Evidence IEA];
                     GO_process: GO:0009399 - nitrogen fixation [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ADP-ribosyl-[dinitrogen reductase] hydrolase"
                     /protein_id="HSV28643.1"
                     /translation="SLEDRALGAFLGFAVGDALGATVEFMTKGEIAAQYGVHRKMIGG
                     GWLHLAPGQVTDDTDMALALGRSLVRQGTFDAKDVCDEFALWLKGGPVDVGNTCRRGI
                     RRYMLHGTVEGPFCDGDAGNGAAMRVLPLALATIHSPDLAEQWAIAQAHITHHHPLSD
                     DATLAFVGMVRALLQGQGIKGAREVANALVAKHKTFRFDPFRGQSTAYVVDTVQTVFH
                     TYFRTDGFKSCVVETVNQGGDADTTGALAGMLAGATYGVAEIPSAWLGKLDKKVHEEI
                     RAMVPRLLELADRLKGTCPHPAALG"
     gene            934..1389
                     /locus_tag="VLL76_03770"
     CDS             934..1389
                     /locus_tag="VLL76_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28644.1"
                     /translation="MRKNWVIGLAVGGLAACASVVGDTESTVHIRTTPDNALCALKGQ
                     GGYAASVASPGSVTVPHTASPVTVTCTAPGFRPTANTLTASADGWVWGNSALIFGTAG
                     VMVLGAMIDESRGAGKAYAEEVEYKLEPDRPRPVNVRTRGGEELKLKAR"
     gene            complement(1376..>1961)
                     /locus_tag="VLL76_03775"
     CDS             complement(1376..>1961)
                     /locus_tag="VLL76_03775"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSV28645.1"
                     /translation="HVVPACKTIRVTFGDGIRRDATLVARDDLNDLAILDTPVDGAET
                     VRFRDGKAVRAGEGVVVVGYPLSSVLSREANVTAGVVSALAGRKGDNRFLQITAPVQK
                     GNSGGPLADMSGTIIGIVATKLDAMKIAERTGDLPQNVNFAIKAEVARQFLADHKIPY
                     ATATPGTDLSAADIGEMIKRVTVFVECEGTPTAP"
BASE COUNT          294 a          670 c          678 g          319 t
ORIGIN      
        1 tatcgcttga ggatcgtgcg ctgggcgcct ttctcggttt cgcggtgggc gacgccctgg
       61 gcgcgaccgt ggaattcatg accaaggggg aaatcgccgc ccaatacggc gtccatcgca
      121 agatgatcgg cggcggctgg ctgcatctgg cgcccggcca ggtcaccgac gacaccgaca
      181 tggcgctggc gctggggcgc tcgctggtgc gccagggcac tttcgacgcc aaggacgtgt
      241 gcgacgaatt cgccctgtgg ctgaagggcg gcccggtcga tgtcggcaat acctgtcggc
      301 gcggcatccg ccgctacatg ctgcacggca ccgtcgaagg gccgttctgc gacggcgacg
      361 ccggcaacgg cgccgccatg cgggtgctgc cgctggccct ggccaccatc cacagccccg
      421 atctggccga gcaatgggcc atcgcccagg cccacatcac ccaccaccac cctttgagcg
      481 acgacgccac ccttgccttc gtcggcatgg tgcgggcgct gctgcagggg caaggcatca
      541 agggcgcgcg cgaggtcgcc aacgccctgg tcgccaagca caagaccttc cgcttcgatc
      601 cgttccgggg ccagagcacc gcctatgtgg tcgacaccgt gcagacggtg ttccacacct
      661 atttccgtac cgacggcttc aagagctgcg tcgtcgagac cgtcaaccag ggcggcgacg
      721 ccgacaccac cggcgccctg gccggcatgc tggccggcgc cacctatggc gtggcggaaa
      781 tcccgtcggc ctggctgggc aagctggaca agaaggtgca cgaggagatc cgcgccatgg
      841 tgccgcgcct gctggaattg gcggaccggc tgaaggggac ttgcccccat cccgccgctt
      901 tgggatagtg gccgtctgcc tttgggggga cgcatgcgga agaattgggt gatcgggttg
      961 gcggtcggcg gcttggcggc gtgtgcgtcg gtggtcggcg acaccgaatc caccgtccac
     1021 atccgcacca cgcccgacaa cgcgctgtgc gccttgaagg ggcagggcgg ctatgccgcc
     1081 tcggtcgcct cgcccggttc ggtcaccgtt ccccacaccg cgtcgccggt gaccgtgacc
     1141 tgcaccgccc ccggcttccg ccccaccgcc aacaccctga ccgcatcggc cgacggctgg
     1201 gtgtggggca attcggcgct gatcttcggg accgccggcg tgatggtgct gggcgccatg
     1261 atcgacgaaa gccgcggcgc cggcaaagcc tatgccgagg aagtggaata caagctggaa
     1321 cccgaccgcc cccgtccggt caacgtcagg acccgtggcg gcgaggaact taagctcaag
     1381 gcgcggtagg cgtcccctcg cattccacga acaccgtcac ccgcttgatc atctcgccga
     1441 tgtcggccgc cgacagatcc gttcccggtg ttgcggtggc gtaggggatc ttgtggtcgg
     1501 ccaggaattg gcgggccacc tccgctttga tggcgaagtt gacgttctgc ggcaggtcgc
     1561 cggtgcgctc ggcgatcttc atggcgtcga gcttggtggc gacgatgccg atgatggtgc
     1621 cgctcatgtc ggccagcggg ccgccggaat tgcccttctg caccggtgcg gtgatctgca
     1681 ggaagcggtt gtcgcccttg cggccggcca gggcgctgac cacgccggcg gtgacgttgg
     1741 cttcgcgcga cagcacgctg gacaggggat agccgaccac caccacgcct tcgccggccc
     1801 gcaccgcctt gccgtcgcgg aagcgcacgg tttcggcgcc gtccaccggg gtgtccagga
     1861 tggcgaggtc gttgaggtcg tcgcgcgcca ccagcgtcgc gtcgcggcgg atgccgtcgc
     1921 cgaaggtgac ccggatggtc ttgcaggccg gcaccacatg g
//
LOCUS       DATIKR010000249         2583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_233623, whole genome shotgun sequence.
ACCESSION   DATIKR010000249 DATIKR010000000
VERSION     DATIKR010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233623"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VLL76_03780"
     CDS             complement(<1..739)
                     /locus_tag="VLL76_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HSV28646.1"
                     /translation="MDEFLLRALAAGLGLALVAAPFGCFVVWRRMAYFGDTLAHTALL
                     GVVAGTVAGIDLTAGVAAVALMVALLLANIRKGTRVASDTVLGIVSHGALAAGLVALS
                     LMETVRVDLMGWLFGDILAVGWSDVLLIWLGGAAVLAGLAFAWRPLVAMTVDEDLALV
                     EGHPVAAARVALMVLIALVVAAAMKIVGVLLVTSLLVVPAATARAFARTPEQMAAFAA
                     LAGAVAVGAGLAGSWSFDTPAGPTIVVV"
     gene            complement(732..1490)
                     /gene="znuC"
                     /locus_tag="VLL76_03785"
     CDS             complement(732..1490)
                     /gene="znuC"
                     /locus_tag="VLL76_03785"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015633 - ABC-type zinc transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006829 - zinc ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HSV28647.1"
                     /translation="MSLVSLANVSVAFGDQPVLVEVSLAVEPGRIVTVVGPNGAGKST
                     LLKVALGLVPADRGKVARIPGLVVGYVPQKLNVDRTLPLSVRRFLAMAGGQGDLETAL
                     EQVKAGHVLRRQVADLSGGELQRVLLARALLRRPGLLVLDEPVGGVDMTGQAEIYDLL
                     ARLAHEQNVGVLMVSHDLHLVMAATDEVVCLNRHVCCAGHPESVSRHPEYLALFGPRV
                     AASLAVYTHDHDHVHLPDGTVEAPHVHGPDCRHG"
     gene            complement(1487..1966)
                     /locus_tag="VLL76_03790"
     CDS             complement(1487..1966)
                     /locus_tag="VLL76_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HSV28648.1"
                     /translation="MTFPPAHHDHGHCVAHALEAAEAECRRRGARLTEVRRRVLELVW
                     QSHQPVGAYAVLEALGREGFCAAPPTVYRALDFLLAHGLVHRIERLNAFVGCSHLGAP
                     HAARFLLCSRCGAAAELDDPAIDGAVAAAAARLGFSIGRQTVEIEGVCPACQSGGQA"
     gene            2032..>2583
                     /locus_tag="VLL76_03795"
     CDS             2032..>2583
                     /locus_tag="VLL76_03795"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HSV28649.1"
                     /translation="MWKPLAAILMALSLAHPANAEPPKVVVSIQPLHSLAAGVMKGVA
                     EPALLVTGAQSEHTYSLRPSDARMIEAADLVILADPAFEAFLAKPLKRSGANAFAMSQ
                     VPGVTRLAKREGGVWSHDDHDHGADFDGHLWLDPTNAKLFAAALAQRLAAHDPANAAT
                     YRANANALEARLDALDSELKARLA"
BASE COUNT          436 a          960 c          877 g          310 t
ORIGIN      
        1 ccaccaccac gatggtgggg ccggcggggg tgtcgaagct ccaactgccg gccaggcccg
       61 cgcccaccgc gacggcgccg gccagggcgg caaaggcggc catctgttcg ggggtgcggg
      121 cgaaggcccg tgccgtcgcc gccggaacga ccagcagcga cgtcaccagc aacaccccga
      181 cgatcttcat ggcggccgcc accaccagcg cgatcagcac catcagggcg acgcgggcgg
      241 cggccaccgg gtgaccttcg accagcgcca gatcctcgtc caccgtcatc gccaccagcg
      301 gccgccaggc gaaggccagg ccggccagca cggcggcgcc gcccagccag atcagcaaga
      361 cgtcggacca gcccaccgcc aggatgtcgc cgaacagcca gcccatcagg tccacccgca
      421 ccgtctccat cagcgacagc gccaccaggc cggcggccag ggcgccgtgc gagacgatgc
      481 ccagcacggt gtcagacgcc acccgcgtgc ccttgcggat gttggccagc agcagggcca
      541 ccatcagcgc caccgccgcc actccggcgg tgaggtcgat accggcgacg gtgccggcga
      601 ccacgcccag caaggctgta tgggccaggg tgtcgccgaa ataggccatg cggcgccaca
      661 ccacgaagca gccgaacggc gcggcgacca aggcgaggcc caggccggcg gccagggcgc
      721 gcagcaggaa ctcatccatg gcggcaatcc ggtccgtgca cgtgcggggc ctcgacggtg
      781 ccgtcgggca ggtgaacgtg gtcgtggtcg tgggtgtaga ccgccaggct ggcggcgacc
      841 cgggggccaa acagggccag atattcggga tggcggctga ccgattcggg atggccggcg
      901 cagcagacat ggcggttaag gcagaccacc tcgtcggtgg cggccatcac caggtgcagg
      961 tcgtgactga ccatcaacac cccgacgttc tgttcgtgcg ccaagcgggc aagcaggtcg
     1021 tagatctccg cctggcccgt catgtcgacg ccgcctaccg gctcgtccaa caccagcaag
     1081 ccgggccggc gcaacagggc acgggccagc agcacccgtt gcaactcgcc gccggacagg
     1141 tcggcgacct ggcggcgcag cacgtggccg gccttgacct gctccagcgc cgtttccagg
     1201 tcgccctgcc cgcccgccat ggcgaggaag cggcgcaccg acaagggcag cgtgcggtcc
     1261 acattcagct tctgcggcac atagccgacc accaggccgg ggatgcgcgc caccttgccg
     1321 cggtcggccg gcaccagccc cagcgccacc ttcaacaggg tggatttgcc ggcaccgttg
     1381 ggcccgacga cggtgacgat gcggcccggc tcgaccgcca gcgacacctc gaccagcacc
     1441 ggctggtcgc cgaacgccac cgacacgttg gccagcgata ccaggctcat gcctgccctc
     1501 ccgactggca ggccgggcac acgccctcga tctcgacggt ctggcggccg atggaaaagc
     1561 caaggcgggc agcagcggca gccaccgcgc cgtcgatggc gggatcgtcc agctcggccg
     1621 ccgcgccgca tcggctgcac agcaggaacc gggcggcgtg cggcgccccc agatgggaac
     1681 agccgacgaa ggcgttgagg cgctcgatgc ggtggaccag cccatgggcc agcaggaaat
     1741 ccagcgcccg gtagacggtg ggcggcgccg cgcagaagcc ctcgcgcccc aacgcctcga
     1801 gcaccgcata ggcgccgacc ggctggtggc tctgccagac caattccagc acccggcggc
     1861 gcacctcggt caggcgggca ccgcgtcggc ggcactcggc ctcggccgcc tccagggcgt
     1921 gggcgacgca atgtccgtgg tcgtggtggg caggcgggaa ggtcatcttg gcagcgccat
     1981 tgcgttacat tataacatca ctcatcgccc atcataccca cggagccctc gatgtggaag
     2041 cccctcgccg ccatcctgat ggccctgtcg ctggcccatc cggccaatgc cgagccgccc
     2101 aaggtggtgg tcagcatcca gccgctgcat tcgctggcgg ccggggtgat gaagggcgtg
     2161 gccgagccgg ccctgctggt gaccggcgcc cagtccgagc acacctattc cctgcgcccg
     2221 tcggacgccc gcatgatcga ggcggccgat ctggtgatcc tggccgaccc cgccttcgaa
     2281 gcattcctcg ccaagcccct caagcgcagc ggcgccaatg ccttcgccat gtcgcaggtg
     2341 cctggcgtga cccggctggc gaagcgcgag ggcggcgtgt ggagccatga cgaccatgac
     2401 cacggcgccg atttcgacgg acatttgtgg ctggacccga ccaacgccaa gctgttcgcc
     2461 gccgcgctgg cccagcgtct ggcggcgcac gaccccgcca acgccgccac ctaccgcgcc
     2521 aacgccaacg cgctggaggc acggctcgat gccctggatt cggaattgaa ggcgcgcctc
     2581 gcg
//
LOCUS       DATIKR010000250         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_15707, whole genome shotgun sequence.
ACCESSION   DATIKR010000250 DATIKR010000000
VERSION     DATIKR010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15707"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..507
                     /locus_tag="VLL76_03800"
     CDS             313..507
                     /locus_tag="VLL76_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28650.1"
                     /translation="MSYPLFDSNFTLWAADLDERLMMLTGACSRRMGVDPKELREQFY
                     KGQSVQSALAELTQRYGQAA"
     gene            complement(602..817)
                     /locus_tag="VLL76_03805"
     CDS             complement(602..817)
                     /locus_tag="VLL76_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014777351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0097351 - toxin sequestering activity
                     [Evidence IEA];
                     GO_process: GO:0001558 - regulation of cell growth
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PrlF family
                     antitoxin"
                     /protein_id="HSV28651.1"
                     /translation="MITSKLTSKAQTTIPQPVRAALHLKEGDEIAYAIEAGRVILTRA
                     PSEPAEDPFATFGEWSSEADQRAYASL"
     gene            complement(864..1472)
                     /locus_tag="VLL76_03810"
     CDS             complement(864..1472)
                     /locus_tag="VLL76_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28652.1"
                     /translation="MSAALDTLRARIRAMERLKPPPPETVPVHPAIDSALPGGGLAPA
                     CLHQVLGADGPATAFAAAIAGRLAARLERPVLWVVTGDDPYGPGLGLPPDRLLVARAR
                     DDRQVLWSMEEALKCPDLACVVAEIGTLDLTAGRRLQLAAEAGGVTGLALHPPLARAA
                     NSGTTRWRVDWAPGGQWRVTLERCRNGAPGEWVAETLASITG"
     gene            complement(1504..>1752)
                     /locus_tag="VLL76_03815"
     CDS             complement(1504..>1752)
                     /locus_tag="VLL76_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28653.1"
                     /translation="HDTNSGLAYRLVARLKATFAGDRPRALVEECERAETAFAHRLIT
                     VDGAGLPAGMVESLRAFHAEVVAALGQLAAVKVRQRGH"
BASE COUNT          261 a          610 c          601 g          280 t
ORIGIN      
        1 accaccccgg cggcctcggc ggcgcggttg acggccgtga cccgcacccc gcccgccgcc
       61 cgcgccacca acgccagcgg ccggccgcgc cactcggcca aggggccgcg cgtcaggcgg
      121 tcggtgggga agcggggaag ccagagatgc aggatacgtt tcatgatctg ttcttatggt
      181 aggcaagctc gtcggccggc gcaatacccc ctttttgttc cgccgcaatt ccgccatcaa
      241 cccgtcatcg tcacgccctc aagcggcgct atcctttgac catggcgaag cgttttcgcc
      301 gggagaccgc aaatgtccta cccgttgttc gacagcaatt tcaccttgtg ggcggccgac
      361 ctcgacgagc ggctgatgat gctgaccggg gcgtgctcgc gccgcatggg cgtcgatccc
      421 aaggaattgc gcgagcaatt ctacaagggg caatcggtcc agtccgccct ggccgaactc
      481 acccagcgct acgggcaggc ggcgtagccg tgtcgaggtc ggtgatctcc acatccctgg
      541 gccagccacg gttctcggcg ctagtgatca tcagcaccca cagcaagccg tgtcccatgc
      601 gttaaaggct ggcataggcg cgctggtccg cttccgacga ccattcaccg aacgtggcga
      661 acggatcttc cgccggttcc gagggtgccc gggtcaagat gacgcgcccg gcctcaatgg
      721 cgtaggcgat ctcatcgccc tccttcaggt ggagagcggc ccgcaccggt tgcggtatgg
      781 tggtctgcgc cttgctggtc aatttgctgg tgatcaccac ggcctccgta aggaatttcc
      841 tttccacgaa gaataagcgg tcattagccc gttatcgagg ccagtgtttc agctacccat
      901 tcccccggcg cgccgttcct gcacctttcc agcgtcaccc gccattgccc gccgggcgcc
      961 caatccactc gccagcgggt ggtgccggaa ttggcggcgc gggccagtgg cgggtgcagt
     1021 gccaggccgg tgacgccgcc cgcttccgcc gccagttgca ggcggcggcc ggcggtcagg
     1081 tcgagggtgc cgatctcggc gaccacgcag gcgaggtccg ggcatttcag cgcctcttcc
     1141 atgctccaca gcacctggcg gtcgtcgcgc gcccgcgcca ccagcaggcg gtcgggcggc
     1201 agccccagcc ccgggccata gggatcgtcg cccgtcacca cccacagcac cggccgctcc
     1261 agccgtgccg cgagccggcc ggcgatggcg gcggcgaagg cggtggcggg gccgtcggcg
     1321 cccagcacct ggtgcaggca ggcgggcgcc agcccaccgc cgggcagggc ggaatcgatg
     1381 gcgggatgca ccggcacggt ctcgggcggc ggcggcttca gccgttccat ggcccggatg
     1441 cgggcacgca gggtgtcgag ggcggcactc atgttcgaaa tatgttccgt tttggcggcg
     1501 cgatcaatgg ccgcgctggc gcaccttgac cgccgccagt tggcccaggg cggcgacgac
     1561 ctcggcgtgg aaggcgcgca gggactcgac catgccggcg ggcaggccgg ccccgtcgac
     1621 ggtgatcagg cggtgggcga aggcggtctc ggcgcgttcg cattcctcga ccagggcacg
     1681 cggccggtcg ccggcgaagg tggccttgag ccgcgccacc agccgatatg ccaggccgga
     1741 attggtgtcg tg
//
LOCUS       DATIKR010000251         1650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_185044, whole genome shotgun sequence.
ACCESSION   DATIKR010000251 DATIKR010000000
VERSION     DATIKR010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185044"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..556
                     /locus_tag="VLL76_03820"
     CDS             71..556
                     /locus_tag="VLL76_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HSV28654.1"
                     /translation="MRVVVLGVGNILMSDEGVGVHAVTALAEHYDLPDWVEVIDGGTS
                     GMDCLDRIADADLLLIADCMRSKDKAPGTITRLADDQINAWFKTKISPHQVGLSDVLA
                     ACCFHGISPKKVVLIGVQPASFETSMELTPAVQAVLPQVIDTLLAELADFGVSAVRKA
                     A"
     gene            561..791
                     /locus_tag="VLL76_03825"
     CDS             561..791
                     /locus_tag="VLL76_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HSV28655.1"
                     /translation="MCMAVPSKVVAIDGFVATVEAFGEQRQTSLLMLDDVAVGDYVIL
                     GAGGNFAAEKVPEEAALVALEYLSQVLADGLA"
     gene            791..>1650
                     /locus_tag="VLL76_03830"
     CDS             791..>1650
                     /locus_tag="VLL76_03830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni,Fe-hydrogenase I large subunit"
                     /protein_id="HSV28656.1"
                     /translation="MFADARIDVALRVAGGRVAEVRLRSTRLVQASRLFAGRRPDEVA
                     TLLPTVFALCGQAQRVACLQAVEAAADAPSPDRRAAVLAETVSEHGLAIARDWPELVG
                     EAPDLAAAKALRLALLKKPDVAATHTAVTILLGAEPEAVLDDFQGWVASRRSPAARLF
                     ADLVMERLAGFGACDFRPMPAGGPAGLAARLEEDDGSFVARPDGGFETGPLARHAGHP
                     LVAELMTEHGNGLLPRLTARLVEIASALRELDQLGQDLHEAPIPVADGAGLGMVEAAR
                     GLLAHRVEMK"
BASE COUNT          217 a          582 c          570 g          281 t
ORIGIN      
        1 tccctcaccc ggcgcttcgc gccaccctct cccgcttgcg ggagagggtt taacaaggaa
       61 agaggttgtc atgcgcgtcg tcgttcttgg ggtcggcaac atcctgatgt cggatgaggg
      121 cgtcggcgtg catgccgtca ccgccctggc cgagcattac gacctgcctg actgggtcga
      181 ggtgatcgac ggcggcacct cgggcatgga ttgcctggac cgcatcgccg atgcggattt
      241 gctgttgatc gccgattgca tgcggtcgaa ggacaaggcg ccgggcacca tcacccggct
      301 ggccgacgac cagatcaacg cctggttcaa gaccaagatt tccccccacc aggtcggact
      361 gtccgacgtg ctggcggcct gctgcttcca cggcatctcg cccaagaagg tggtcctgat
      421 cggcgtgcag ccggcctcgt tcgagacctc gatggagctg acgcccgccg tccaggcggt
      481 gctgccccag gtcatcgaca cgctgttggc ggaactggcc gatttcggcg tctcggccgt
      541 gcgcaaggcg gcgtgatccc atgtgcatgg ccgttccgtc caaggtggtc gccatcgacg
      601 gtttcgtcgc caccgtcgag gccttcggcg aacagcgtca gaccagcctg ctgatgctgg
      661 acgacgtcgc cgtgggcgac tacgtcatcc tgggcgccgg cggcaacttc gccgccgaga
      721 aggtgcctga ggaggctgct ttggtcgcgc tcgaatacct gtcgcaggtc ctggccgacg
      781 gcttggcctg atgttcgccg acgcccgtat cgacgtagcc ttgcgcgtgg ccggcggccg
      841 cgtcgccgag gtgcggctgc gctcgacccg gctggtgcag gcgtcgcgcc tgttcgccgg
      901 ccgccgaccc gacgaagtgg cgaccctgct gcccaccgtg ttcgcgctgt gcggccaggc
      961 ccagcgcgtc gcctgcctgc aggcggtcga ggccgccgcc gatgccccct cgcccgaccg
     1021 ccgtgccgca gtgctggcgg aaaccgtctc cgagcatggc ctggccatcg cccgcgactg
     1081 gccggaactg gtcggcgagg cgcccgatct ggcggcggcc aaggctttgc ggttggcgct
     1141 gctgaaaaag cccgatgtcg ccgccactca taccgccgtc accatcctgc tgggcgccga
     1201 gccggaggcc gtcctggacg acttccaggg ctgggtcgcc tcgcgccgca gccccgccgc
     1261 ccgcctgttc gccgatctgg tgatggagcg cctggccggc ttcggcgcct gcgatttccg
     1321 ccccatgccc gccggcggcc ccgccggcct tgccgcccgg ctggaggagg acgacggttc
     1381 cttcgtcgcc cgccccgacg gcggcttcga gaccggcccc ctggcccgcc atgccggcca
     1441 ccccctggtg gcggaattga tgaccgagca cggcaacggc ttgctgccgc gcctgaccgc
     1501 gcgtttggtc gagatcgcgt cggcattgcg ggaactggac caactcgggc aggatttgca
     1561 cgaggccccg atcccggttg ccgatggcgc cgggttggga atggtcgagg cggcacgggg
     1621 cctgttggcc caccgggtcg agatgaagga
//
LOCUS       DATIKR010000252         1904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_28045, whole genome shotgun sequence.
ACCESSION   DATIKR010000252 DATIKR010000000
VERSION     DATIKR010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28045"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VLL76_03835"
     CDS             <1..282
                     /locus_tag="VLL76_03835"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV28657.1"
                     /translation="AKIDAEYVIDARDPRGRSVLKAMTGLCRDLNIITVGECVEDAAA
                     LHILRDVGVDYAQGHYFAKPDANAAKKIKYFTEHVKAAGTAEPGLAMMG"
     gene            complement(407..>1904)
                     /locus_tag="VLL76_03840"
     CDS             complement(407..>1904)
                     /locus_tag="VLL76_03840"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HSV28658.1"
                     /translation="PVVAVDLTGAGVGFAAAARAGIGRLSVELDGRWADGRIEGSATA
                     RDRDVLRLAASGSAMLEGDGALAGRVELTGDVARITEALPLAGHVFAGRIDGAADVGG
                     TLARPRLDGQARLDGGRYENLEFGTLVTGLEADIAIDGDTATITAQGGDGRDGRVALD
                     GQVVLAGEPRWQGDISLDRFRAVRRDDVRARLSADLAFAGQGERGRLSGDAEISRADV
                     DISRLQGGGPVTLDVIEVNRPGPSPQRKRDPAEAPAPLTIALAIDLDVDRAFVRGRGL
                     DSDWSGKVQVAGTLDAPTLTGRLSPDRGRYEFLGRAFDLSKDSGVVFDGGLSPRLDVT
                     AEADAGDVQARVVLTGTVEAPQVDITSDPPLPRDEVLSRVLFGEEPGQLSVFQQIQLG
                     QLAAGGLTGNGGGFDPIGKVRGALGLDVLEVGSSDDQTADADDNGGGPTLSAGKYIGD
                     NTFLRVEQGTDGVGSVTVERELGAGLSITTELGQQSGGGVGVEWRRNY"
BASE COUNT          283 a          727 c          626 g          268 t
ORIGIN      
        1 gccaagatcg acgccgaata cgtcatcgac gcccgcgacc ctcgcggacg atcggtgctg
       61 aaggcgatga ccggcctgtg ccgcgacctc aacatcatca ccgtcggcga atgcgtcgag
      121 gacgccgcgg cgctgcacat cctgcgcgat gtcggcgtcg attacgccca aggccactac
      181 ttcgccaagc ccgacgccaa cgcggccaag aagatcaagt acttcaccga gcatgtaaag
      241 gcggcgggca cggcggaacc cggcttggcg atgatggggt gacggtgcga tcaatggccg
      301 tcatcccggg cgagcatcgc gagacccggg atccatgggt gtgcaccgaa catggacccc
      361 ggctcgcgct gcgcttggcc ggggtgacgg cctctctcac gctgccttaa taatttcgcc
      421 gccactccac cccgacgccg ccgccgctct gctggcccag ttcggtggtg atggacaggc
      481 cggcgcccag ttcccgctcc accgtcaccg acccgacgcc gtcggtgccc tgctcgaccc
      541 gcaggaaggt gttgtcgccg atatacttgc cagcgctgag ggtcgggccg cccccgttgt
      601 cgtccgcgtc ggcggtctgg tcgtcgcttg atccgacctc cagcacatcg aggcccaggg
      661 cgccgcgcac cttgccgatg gggtcgaagc cgccgccgtt cccggtcagg ccgcccgccg
      721 ccaattgccc cagctggatc tgctggaaga ccgacaattg gcccggttcc tcgccgaaca
      781 gcacgcggct gaggacctcg tcgcggggca gcggcgggtc cgaggtgatg tccacctggg
      841 gcgcctcgac ggtgccggtc agcaccaccc gcgcctggac atcgccggca tcggcctcgg
      901 cggtgacgtc gagccggggg ctgaggccac cgtcgaacac cacgccgctg tcctttgaca
      961 ggtcgaacgc gcggcccagg aactcatagc gcccccggtc gggcgacagc cgcccggtca
     1021 atgtgggggc gtccaacgtc cccgccacct gcaccttgcc gctccaatcc gaatcgaggc
     1081 cgcgcccgcg cacgaaggcc cggtccacgt ccaggtcgat ggccaaggcg atggtcagcg
     1141 gcgccggggc ctcggccggg tcgcgtttcc tttgcgggga aggacccgga cgattgacct
     1201 cgatgacatc caacgtcacc ggcccgccac cctgcaaacg gctgatgtcc acgtctgccc
     1261 ggctgatttc ggcatcaccg ctcaaccgcc cccgttcgcc ctggccggca aaggcaaggt
     1321 cggccgacaa ccgcgcccgc acgtcgtcgc ggcggacggc gcggaagcgg tcgaggctga
     1381 tgtcgccctg ccagcgcggt tcgcctgcca gcaccacctg cccgtccagc gccacccggc
     1441 cgtcacggcc gtcgccgccc tgggccgtga tggtcgcagt gtcgccgtcg atggcgatgt
     1501 cggcctcaag ccccgttacc agggtgccga attccaggtt ctcatagcgc ccgccgtcca
     1561 gcctcgcctg gccgtccaac cggggccgcg ccagggtgcc gccgacatcc gccgcgccat
     1621 cgatgcggcc ggcgaagacg tgacccgcca agggcagcgc ctcggtgatg cgggcaacgt
     1681 cgccggtgag ttcgacccgg ccggccagcg caccgtcccc ctccagcatg gccgacccgc
     1741 ttgccgccag ccgcagcacg tcgcggtcgc gggcggtggc actgccttcg atccggccgt
     1801 cggcccagcg cccgtccaat tcgacggaca ggcggccgat gccggcgcgg gcggcggcgg
     1861 cgaagccgac accggccccc gtcaggtcca ccgcgaccac cggc
//
LOCUS       DATIKR010000253         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_88751, whole genome shotgun sequence.
ACCESSION   DATIKR010000253 DATIKR010000000
VERSION     DATIKR010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88751"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /gene="arfB"
                     /locus_tag="VLL76_03845"
     CDS             complement(<1..322)
                     /gene="arfB"
                     /locus_tag="VLL76_03845"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HSV28659.1"
                     /translation="MIPITRRIQLDEREIEESFARASGPGGQNVNKVETAVQLRFDVR
                     NSPSLPDDVKARLEKLAGRRLTLDGVLIVTAQEHRSQDRNRAEALAKLVDLVREAAKP
                     PPPIR"
     gene            complement(319..585)
                     /locus_tag="VLL76_03850"
     CDS             complement(319..585)
                     /locus_tag="VLL76_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HSV28660.1"
                     /translation="MTRTLFVCANRRLGATGSCASAGAGELIAALRAELDRRCLDWRV
                     AENPCMGHCAAGPNLKAAPGGPLLHQCRAQDAAAIVTQLLETWT"
     gene            complement(582..>2059)
                     /locus_tag="VLL76_03855"
     CDS             complement(582..>2059)
                     /locus_tag="VLL76_03855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28661.1"
                     /translation="GKPLKVLIVEDSEDDAELMIAELMRGGFAPVVRRVDTLPDLQAA
                     LAGGEWEVVLSDCHMPHMSADLALTTLQQSRQDLPFIILSGVVRPEDAVSLLKRGAHD
                     FINKDALARLVPAVERELREASERAQRRAAEQRVRILSLAVEQSPVSVVITGRDGTIE
                     YVNPKFEEVTGYSFADSVGRPLDFTRDGEGAEAFAMLTASMAAGEEWRGELSNRRRDG
                     QMFWERVSASPLTSETGAITHFVVVKEDITERRLHENELREALDQLTQTNTELERFAY
                     VASHDLQEPLRTVTLYCQLLDRDLRGKLSDDADDYLHFIVGAAKRMHALINDLLAYSR
                     ITGGLPFTPVRAADACASALQNLQESIRETGASIEVRPLPVIAADQVQLMQLFQNLIG
                     NAIKFHRPDVAPRIVVSAEQVGGEWVFSVADNGIGIEASEQDVFEIFRRLHTAQAYPG
                     TGVGLAICKRIVQRHGGSIWMTSQPGQGSTFFFTLAKRERA"
BASE COUNT          299 a          685 c          740 g          335 t
ORIGIN      
        1 ggcggatggg cggcggcggc ttggccgcct cgcgcaccag gtccaccagc ttggccagcg
       61 cctcggcgcg gttgcggtcc tggctgcggt gttcctgggc ggtgacgatc agcacgccgt
      121 ccagggtcag ccgccgcccc gccagctttt ccagccgggc cttgacgtcg tcgggcagcg
      181 acggcgagtt gcgcacgtcg aagcgcaact gcaccgccgt ctcgaccttg ttgacgttct
      241 ggccgccggg acccgacgcg cgggcgaagc tttcctcgat ctcgcgctcg tcgagctgga
      301 tgcggcgggt gatcgggatc atgtccaggt ttccagcaac tgcgtcacga tggcggcggc
      361 gtcctgggcg cggcactggt gcagcagcgg cccgcccggc gccgccttga ggttggggcc
      421 ggcggcacaa tggcccatgc agggattttc cgccacccgc caatcgaggc agcggcggtc
      481 cagttcggcg cgcagggcgg cgatcaattc cccggcgcca gccgaggcgc acgaccccgt
      541 cgcgcccagg cggcggttgg cgcagacgaa cagggtgcgg gtcacgcgcg ctcgcgcttc
      601 gcaagggtga agaagaaggt gctgccctgg ccgggctgcg acgtcatcca gatcgagccg
      661 ccgtgacgct gcacgatgcg cttgcagatg gccaggccga cgccggtgcc gggataggcc
      721 tgggccgtgt gcaggcggcg gaagatttcg aacacgtcct gttccgaggc ctcgatgccg
      781 atgccgttgt ccgccaccga gaacacccat tcgccgccca cctgctcggc cgacaccacg
      841 attctgggcg ccacgtcggg gcggtggaac ttgatggcgt tgccgatcag gttctggaac
      901 agctgcatca actgcacctg gtcggcggcg atcaccggca gcggccggac ctcgatgctg
      961 gcgccggtct cgcggatgct ttcctgcagg ttctgcagcg ccgaggcaca ggcatcggcg
     1021 gcgcgcaccg gggtgaaggg cagccccccg gtgatgcggg aataggccag caggtcgttg
     1081 atcagcgcat gcatgcgctt ggcggcgccg acgatgaagt gcaggtagtc gtcggcgtcg
     1141 tcgctgagct tgccgcgcag gtcgcggtcc agcaattggc agtaaagggt caccgtccgc
     1201 agcggttcct gcaggtcgtg cgaggcgaca taggcgaaac gttccaactc ggtgttggtc
     1261 tgggtcagct ggtccagcgc ctcgcgcagc tcgttctcgt gcaggcggcg ttcggtgatg
     1321 tcctccttga ccaccacgaa atgggtgatg gccccggttt cgctggtcaa cggcgaggcg
     1381 ctgacgcgct cccagaacat ctggccgtcg cggcggcggt tggacaattc gccgcgccat
     1441 tcctcgccgg cggccatgga cgcagtcagc atcgcgaagg cctcggcgcc ctcgccgtcg
     1501 cgggtgaagt ccagcggccg gccgacggaa tcggcgaagg aatagccggt gacctcctcg
     1561 aacttggggt tgacgtattc gatggtgccg tcgcggccgg tgatgaccac cgacaccggg
     1621 ctttgctcga ccgccagcga caggatgcgg acccgctgtt cggcggcgcg ccgctgcgcc
     1681 cgctcgctcg cttcgcgcaa ttcgcgctcg accgccggca ccagacgggc cagggcgtcc
     1741 ttgttgatga agtcgtgggc gccgcgcttg agcaggctga ccgcgtcctc gggccgcacc
     1801 acgccggaca ggatgatgaa gggcaggtcc tggcggcttt gctgcagggt ggtcagcgcc
     1861 agatcggccg acatgtgcgg catgtgacag tcgctgagga cgacctccca ttcgccgccc
     1921 gccagggcgg cctggaggtc gggaagggtg tcgacgcgcc gcacgaccgg agcgaagccg
     1981 ccgcgcatca gctcggcgat catcagctcg gcatcgtcct cggaatcctc gacgatcagg
     2041 accttgagcg gcttgcccg
//
LOCUS       DATIKR010000254         2898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_149364, whole genome shotgun sequence.
ACCESSION   DATIKR010000254 DATIKR010000000
VERSION     DATIKR010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149364"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..156
                     /locus_tag="VLL76_03860"
     CDS             <1..156
                     /locus_tag="VLL76_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28662.1"
                     /translation="AERMRLSARGYHRVLRVARTLADLDGSGGVRRIHVAEALSYRRL
                     MPGRSAL"
     gene            217..864
                     /locus_tag="VLL76_03865"
     CDS             217..864
                     /locus_tag="VLL76_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28663.1"
                     /translation="MTAACPTRSCHSISEIVITVVRALMRERAVDGKVDIEDVDRILQ
                     LLGRGTVAMDNAFQLQEEKCRKIHSKPKGNVGARSNPFQRLIVRPFEHLLMGEGAVFQ
                     RGWLPNYFEFIDHALATNKEAYERDCRAVIQALLVVHGNNLTWDHFYSDVRTLKVLHA
                     ALKELTHVLSTPAGTKLWGGMLLRPCGDLPAPAIPQINHIRDALLETHRGLAATG"
     gene            complement(952..1314)
                     /locus_tag="VLL76_03870"
     CDS             complement(952..1314)
                     /locus_tag="VLL76_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HSV28664.1"
                     /translation="MAYDPNNIFARILRGEIPCKKVHEDDYALAFHDINPQAPVHVLV
                     IPKGAYVDMADFTAKASPDEIAGFFRAVRIVAGIAGVAENGWRMIANIGADSHSEVPH
                     LHIHILGGKPLGPMLVKQ"
     gene            complement(1405..1722)
                     /locus_tag="VLL76_03875"
     CDS             complement(1405..1722)
                     /locus_tag="VLL76_03875"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HSV28665.1"
                     /translation="MEKHVLDTLFAVIRSRQGADPETSYTAKLFAKGRKKIAQKVGEE
                     GVETALAALAEGPAGVTSESADLLYHLMVLWAECGVAPEDVWAELQRREGISGIAEKN
                     SRK"
     gene            complement(1725..2486)
                     /gene="hisF"
                     /locus_tag="VLL76_03880"
     CDS             complement(1725..2486)
                     /gene="hisF"
                     /locus_tag="VLL76_03880"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HSV28666.1"
                     /translation="MLKMRIIPCLDVKDGRVVKGVNFVDLIDAGDPVAQAKIYDAAGA
                     DELTFLDITASSDNRDTIYDVVARTAEACFMPLTVGGGVRQVDDIRKLLLAGADKVSI
                     NTAAVHRPEFVREAAEKFGSQCIVVAIDAKQTGPNKFEIFTHGGRNPTGLDAVEWARR
                     MAEYGAGEILLTSMDRDGTKQGFNIPLTRAVADAVTIPVIASGGVGNLDHLVEGIRDG
                     HATAVLAASIFHFGLYSIAEAKAHMAAAGIPVRPV"
     gene            complement(2490..>2898)
                     /locus_tag="VLL76_03885"
     CDS             complement(2490..>2898)
                     /locus_tag="VLL76_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HSV28667.1"
                     /translation="LRDPELVKQACKRFPGRVAVGIDAKGGRVAVEGWAETSDLTVLD
                     LALKFEDAGAAAIIYTDIDRDGVLAGPNVGATADLAKAISTPVIASGGVSSLDDLRAL
                     KAVASSGIAGVISGRAIYDGRIDVAEAIRLLKD"
BASE COUNT          454 a          949 c          972 g          523 t
ORIGIN      
        1 gccgagcgca tgcggctgtc ggcgcgcggc tatcaccgcg tgctgcgggt cgcccgcacc
       61 ctggccgacc tcgacggttc gggcggcgtg cgccgcatcc atgtggccga agcgctgtcc
      121 tatcgccggc tgatgccggg gcgctcggcg ctgtgagatg aacctccggt aaacataagc
      181 ttgcgggcat aggcattttt acgcacagtc ttgggcatga ccgccgcctg cccgacccgt
      241 tcctgtcatt ccatctcgga gatcgtcatc accgtcgtcc gggcgctgat gcgcgagcgc
      301 gccgtggatg gcaaggtcga catcgaggat gtcgatcgca tcctgcaatt gctcggccgc
      361 ggcaccgtcg ccatggacaa cgccttccaa ttgcaggaag agaagtgccg caagatccac
      421 agcaagccca agggcaatgt cggcgcccgc tcgaacccgt tccagcgcct gatcgtgcgg
      481 ccgttcgagc atctgctgat gggcgagggg gcggtgttcc agcgcggctg gctgcccaat
      541 tatttcgagt tcatcgacca cgccctggcg accaacaagg aagcctatga gcgcgactgc
      601 cgcgccgtga tccaggcgct gctggtggtc catggcaaca acctgacctg ggaccacttc
      661 tattccgacg tccgcacgct caaggtgctg cacgcggcgc tgaaggaatt gacccacgtg
      721 ctgtcgaccc cggccggcac caagctgtgg ggcggcatgc tgctgcgccc ctgcggcgac
      781 ctgcccgccc ccgccatccc gcagatcaac cacatccgcg acgcgttgct ggagacccat
      841 cgcggcctgg cggcgacggg atagaaaagt tattcccaca gatgaacaca gatctttatc
      901 tgtgtagccc gcgtcagcgg gcatcggtgt tcatctgtgg gccttattct cttactgctt
      961 caccagcatc ggccccagcg gcttgccgcc caggatgtgg atgtgcaggt ggggcacctc
     1021 ggaatggctg tcggcgccga tgttggcgat catgcgccag ccgttctcgg ccaccccggc
     1081 gatgccggcc acaatgcgca ccgcgcggaa gaagccggcg atctcgtcgg gcgacgcctt
     1141 ggcggtgaaa tcggccatgt ccacataggc gcccttgggg atcaccagca catgcaccgg
     1201 ggcttgggga ttgatgtcgt ggaaggcgag ggcgtaatcg tcctcgtgga ccttcttgca
     1261 cgggatctcg ccgcgcagga tacgggcgaa gatgttgttg ggatcgtacg ccatgtgtct
     1321 tctccccatt gtggagttag acacggatga acacggatga acgcagatat gggttatccg
     1381 tgtctatccg tgttcatccg tgtcttattt cctgctgttc ttttccgcga tgccggaaat
     1441 gccttcgcgg cgctgcaact cggcccacac gtcttcgggt gcgacgccgc attcggccca
     1501 cagcaccatc aggtgataga gcaggtcggc gctttccgag gtcacgcccg ccggcccctc
     1561 ggccagggcg gccaaagccg tctcgacgcc ttcctcgccc accttctggg cgatcttctt
     1621 gcggcccttg gcgaacagct tggcggtgta gctggtttcc gggtcggcgc cctggcgcga
     1681 ccggatgacg gcgaacaacg tgtcgaggac gtgcttttcc atggtcacac cgggcggacg
     1741 gggatgccgg cggcggccat gtgggccttg gcctcggcga tggaatacag gccgaaatgg
     1801 aagatcgagg cggccagcac ggcggtggcg tggccgtcgc ggatgccttc gaccagatgg
     1861 tcgaggttgc cgacgccgcc cgaggcgatc accgggatgg tcacggcgtc ggccacggca
     1921 cgggtcagcg ggatgttgaa gccctgcttg gtgccgtcgc ggtccatgga ggtcagcagg
     1981 atctcgccgg caccgtattc cgccatgcgc cgcgcccatt ccaccgcgtc gaggccggtg
     2041 gggttgcggc cgccatgggt gaagatctcg aacttgttcg gcccggtctg cttggcgtcg
     2101 atggccacca caatgcactg gctgccgaac ttctcggccg cctcgcgcac gaattccggg
     2161 cgatggacgg cggccgtgtt gatgctgacc ttgtcggcgc cggccagcag cagcttgcgg
     2221 atgtcgtcga cctggcgcac gccgccgccc acggtcagcg gcatgaagca ggcctcggcg
     2281 gtacgcgcga ccacgtcata gatggtgtcg cggttgtcgg acgaggcggt gatgtcgagg
     2341 aaggtcagtt cgtcggcgcc ggcggcgtca tagatcttgg cctgggcgac ggggtcgccg
     2401 gcgtcgatca ggtcgacgaa gttcaccccc ttgaccacgc gcccgtcctt gacgtcgagg
     2461 caggggatga tgcgcatctt cagcatgggt cagtccttga gcagccggat ggcctcggcc
     2521 acgtcgatgc ggccgtcata gatggcgcgg cccgagatca cgccggcgat gcccgacgac
     2581 gccaccgcct tgagcgccct caggtcgtcg agcgacgaca ccccgcccga ggcgatcacc
     2641 ggggtcgaga tggccttggc caggtcggcg gtggcgccca cgttggggcc ggccagcacg
     2701 ccgtcgcggt cgatgtcggt gtagatgatg gccgccgcgc cggcatcctc gaacttcagc
     2761 gccaggtcca gcacggtcag gtccgaggtc tcggcccagc cctcgacggc gacgcggccg
     2821 cccttggcgt cgatgcccac cgccacacgg ccggggaagc gcttgcacgc ctgcttgacc
     2881 agctcgggat cgcgcagc
//
LOCUS       DATIKR010000255         2224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_173477, whole genome shotgun sequence.
ACCESSION   DATIKR010000255 DATIKR010000000
VERSION     DATIKR010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173477"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VLL76_03890"
     CDS             <1..409
                     /locus_tag="VLL76_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HSV28668.1"
                     /translation="GARIGCTLHRVDAGIDTGPVVGIGWLPIDPARSLLWHVVNTYGP
                     GIDLFFAMLDDVAAGRPVKLEPQDRSQRVYGSLPGADAFKTFWDKGFRLFDPREYTDI
                     VAGFMPPGMKIPHDVAIGISEQKVGASCCCAHA"
     gene            388..>2224
                     /locus_tag="VLL76_03895"
     CDS             388..>2224
                     /locus_tag="VLL76_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSV28669.1"
                     /translation="MLLRTRVTLIVSVTYSLLVAGLMFAGLKSEELADERYAQATLNG
                     QEIFWRKLVENTVQRLEADARVVAAATWLTDAVERRDPTAVLAGATPLAESLKARARV
                     TRFEVMNRDGELLYSSRGSLLEPPTVDAGTVRTIVEGGKPVRGVQQDASKSFTATLAF
                     PLEHDAKVVGVAVLAADMQPPLQEFKASTGSDIFLVDRTSQLALGTDDTLWKVFEGHI
                     TVRKSRLETHQDGETFYSVAVLPLYDGSERVIGALLTARDVTATQARQRMIRQVSVAA
                     VIGFLLVVLGVFYVYLRRSFHPLDEAIAVLNALSRGDTSVTLEVKNDKDEIGRIAGTV
                     GVFRDNMVKLELLQERRERQRRRQELYIRLQMLKLSEMLEQEARAAVLADLKQIEAMA
                     ERAAEGGEEGGKGELEVLGLAFQTMSDRIREQHERLEGLIAERTRDVEILREALRTRD
                     QLAVLRQELDFARELQLSSLPQVFPPFPDRTEFQIHAAMVPAKEVGGDFYDFFMIDRY
                     HLGFVIGDASGKGVPAAMFIAIARSLIKAVAPLSGSPGECMAFVNTMLAADNPQTLFA
                     TCFYAVLDTRTGEVAFSNAGHPPSLILRGNGEIEAIRDVSGVALGV"
BASE COUNT          348 a          767 c          750 g          359 t
ORIGIN      
        1 cggcgcgcgc atcggctgca ccctgcaccg ggtggatgcc ggcatcgaca ccggcccggt
       61 ggtgggcatc ggttggctgc ccatcgatcc ggcgcggtcg ctgctgtggc acgtggtcaa
      121 cacctatgga ccgggcatcg acctgttctt cgccatgctc gatgacgtgg ccgccggccg
      181 tccggtcaag ctggagccgc aggaccgcag ccagcgcgtc tatggcagcc tgcccggcgc
      241 cgacgccttc aagaccttct gggacaaggg cttccgcctg ttcgatccca gggaatacac
      301 ggacatcgtc gccggcttca tgcccccggg catgaagatc ccgcatgacg tggccatcgg
      361 catctccgaa caaaaggtgg gggcgtcatg ctgctgcgca cacgcgtaac gctgatcgtc
      421 tcggtcacct attctctgct ggtcgcgggc ctgatgttcg cgggcctgaa aagcgaggaa
      481 ttggccgacg agcgctatgc ccaggccacg ctcaacgggc aggagatctt ctggcgcaag
      541 ctggtggaaa acacggtgca gcggctggag gccgacgccc gcgtggtcgc cgccgccacc
      601 tggctgaccg acgcggtgga acgccgcgac cccacggcgg tgctggccgg cgccacgccg
      661 ttggcggaaa gcttgaaggc gcgcgcccgc gtcacccgct tcgaggtcat gaaccgcgac
      721 ggtgagctgc tgtacagctc gcgcggctcg ctgctggagc cgccgacggt ggacgccggc
      781 accgtgcgca ccatcgtcga gggcggcaag ccggtgcgcg gcgtgcagca ggacgcttcg
      841 aagagcttca ccgccaccct ggccttcccg ctggaacacg atgccaaggt ggtcggcgtc
      901 gccgtgctgg ccgccgacat gcagccgccg ctgcaggaat tcaaggcgtc caccggttcc
      961 gacatcttcc tggtcgaccg caccagccag ttggcgctgg gcaccgacga caccctgtgg
     1021 aaggtgttcg agggccacat caccgtgcgc aagagccggc tcgagaccca ccaggacggc
     1081 gagacctttt attccgtcgc ggtgctgccg ctctatgacg gttcggaacg cgtcatcggc
     1141 gccctgctga cggcgcgcga cgtcaccgcc acccaggccc gccagcgcat gatccgccag
     1201 gtctcggtgg cggccgtgat cggcttcctg ctggtggttc tgggcgtgtt ctacgtctac
     1261 ctgcgccgct cgttccatcc gctggacgag gccatcgcgg tgctgaacgc actgtcgcgc
     1321 ggcgacacct cggtgacgct ggaggtcaag aacgacaagg acgagatcgg ccgcatcgcc
     1381 ggcaccgtcg gcgtgttccg cgacaacatg gtcaagctgg agcttttgca ggaacgccgc
     1441 gagcgccagc gccgccgcca ggaattgtac atccgcctgc agatgctgaa gctgtccgag
     1501 atgctggagc aggaggcccg cgccgccgtg ctggccgacc tcaagcagat cgaggccatg
     1561 gccgagcgcg ccgccgaggg tggcgaggag ggcggcaagg gcgagctgga agtgctgggc
     1621 ctggcgttcc agaccatgtc ggaccgcatc cgcgagcagc acgagcgcct ggaaggcctg
     1681 atcgccgagc gcacccgcga cgtcgagatc ctgcgcgagg ctttgcgcac ccgcgaccag
     1741 ttggcggtgc tgcgccagga actggatttc gcccgcgagc tgcaattgtc gtcgctgccg
     1801 caggtgttcc cgcccttccc cgaccgcacc gagttccaga tccatgccgc catggttccg
     1861 gccaaggagg tcggcggcga tttctacgac ttcttcatga tcgaccgcta ccacctgggc
     1921 ttcgtcatcg gcgacgcctc gggcaagggc gtgccggcgg ccatgttcat cgccatcgcg
     1981 cgctcgctga tcaaggcggt ggcgccgctg tcgggcagcc cgggcgagtg catggccttc
     2041 gtcaacacca tgctggcggc cgacaacccg cagaccctgt tcgccacttg cttctatgcc
     2101 gtgctcgaca cccgcactgg cgaagtcgcc ttcagcaacg ccggccaccc gccgtcgctg
     2161 atcctgcgcg gcaatggcga gatcgaggcg atccgcgacg tctcgggcgt ggcgctgggc
     2221 gtca
//
LOCUS       DATIKR010000256         2193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_197544, whole genome shotgun sequence.
ACCESSION   DATIKR010000256 DATIKR010000000
VERSION     DATIKR010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197544"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1013
                     /locus_tag="VLL76_03900"
     CDS             <1..1013
                     /locus_tag="VLL76_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28670.1"
                     /translation="LSTRVEIPLKMGEPQLVVLHAAILAAADAVTEVQKAALRKLLPA
                     AAGPLETLASKPSVQMSMPQQRSTQMVFGHVCAATAQVVPPSQADEWLEKAINAYRAA
                     EKRLNPRMDPMWEAGLISRHIAAVLMQRAERSKEKAQGYLEDAIKAWRAAADTLPKGT
                     MTLEWAGTQTRLGTALYRLDLITGDTELLRQAVQVLQGALTVYSRTETPQRWADIMHT
                     LAQVLEVYGDQIRSAEVLRRAIDACDQVLEIRTRERTPLAWASIQNTLGSALFMLDKH
                     TEGGRHLPDAIAAFHGALEVFQAHGRKGPAQVAARNLAKAQKLAEDRKGRQVIDPHWA
                     DE"
     gene            1085..1411
                     /locus_tag="VLL76_03905"
     CDS             1085..1411
                     /locus_tag="VLL76_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0097351 - toxin sequestering activity
                     [Evidence IEA];
                     GO_process: GO:0001558 - regulation of cell growth
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PrlF family
                     antitoxin"
                     /protein_id="HSV28671.1"
                     /translation="MTVLEIAAKITERGQTTIPSPFRRMLGVLKQGEIVFRADERGVI
                     TIAPAPPRLEHDPALAGFLDLLERDIGANPVAMKPLTADTRDRVAALTDGVTCDLDVP
                     LAEDDA"
     gene            1404..1835
                     /locus_tag="VLL76_03910"
     CDS             1404..1835
                     /locus_tag="VLL76_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008606763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YhaV family
                     toxin"
                     /protein_id="HSV28672.1"
                     /translation="MPDTPLVINGWKIFAHPLFLDQFENLIQAAETKRAKDPQGYTGS
                     AAAKKLKAVGDLVFSIIPSDPAHPKFRQGGTLGEEHKHWFRAKFFERYRLFFRYRTDV
                     KVIVYAWLNDEDSLRAKGSRNDPYAVFQGMLAGGNPPDDWG"
     gene            complement(1896..>2193)
                     /locus_tag="VLL76_03915"
     CDS             complement(1896..>2193)
                     /locus_tag="VLL76_03915"
                     /inference="COORDINATES: protein motif:HMM:NF021472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HSV28673.1"
                     /translation="GSLFLLTGTLVGGAIAALAFALSVVSMPMLLDRDVSVLTAMRTS
                     LRVVWLNRRNMIGWAATLATLGLLGIAFFFAGLAVTLPIAAHASWHAYRDLVKK"
BASE COUNT          402 a          785 c          717 g          289 t
ORIGIN      
        1 gcctgtcgac ccgggtcgag atcccgctga agatgggcga gccgcaattg gtggtgctgc
       61 acgccgccat cctggccgcc gccgacgcgg tgaccgaggt gcagaaggca gccttgcgca
      121 agctgctgcc ggccgccgcc gggccgctgg aaacactggc gagcaagccg tcggtgcaga
      181 tgtcgatgcc gcagcagcgc agcacccaga tggtgttcgg ccatgtctgc gccgccaccg
      241 cccaggtggt gccaccgtcg caggccgacg aatggctgga gaaggcgatc aacgcctatc
      301 gggcggccga gaagcgcctc aacccccgca tggaccccat gtgggaggcc ggcctgatca
      361 gccgccacat cgccgccgtg ctgatgcagc gggccgagcg ctctaaggag aaggcccagg
      421 gctacctgga ggacgccatc aaggcctggc gggccgccgc cgacaccctg cccaagggca
      481 ccatgaccct ggaatgggcc ggcacccaga cccggctggg caccgcgctg tatcgcctgg
      541 acctgatcac cggcgacacc gaattgctgc gccaggcggt gcaggtgctg cagggcgcgc
      601 tgaccgtcta ttcgcgcacc gagacgccgc agcgctgggc cgacatcatg cacaccctgg
      661 cccaggtgct ggaggtctat ggcgaccaga tccgcagcgc cgaggtgctg cgccgcgcca
      721 tcgacgcctg cgaccaggta cttgaaatcc gcacccgcga gcgcacgccg ctggcctggg
      781 cgtcgatcca gaacaccctg ggctcggccc tgttcatgct ggacaagcat accgagggcg
      841 gccgccacct gcccgacgcc atcgccgcct tccacggcgc gctcgaggtg ttccaggccc
      901 acggccgcaa aggcccggcc caggtcgccg cccgcaacct cgccaaggcc cagaagctgg
      961 ccgaggaccg caagggccgc caggtcatcg acccgcactg ggcggacgaa taagggccgc
     1021 cccttgtggg cacaatgcaa acgcattacc ttgatggcag catcgacaag gaaggaacgc
     1081 cgccatgacc gtgctcgaga tcgcggccaa gatcacggag cggggccaga ccaccatccc
     1141 ctcgccgttc cggcgcatgc tgggcgtgct caaacagggt gaaatcgtct tccgggccga
     1201 cgaacgcggc gtgatcacca tcgccccggc gcccccccgc ctcgagcacg accccgcgct
     1261 ggccggcttc ctcgacctgc tcgagcgcga catcggtgcg aaccccgtgg cgatgaagcc
     1321 gttgaccgcc gacacccgcg accgggtcgc ggccctgacc gacggcgtca cctgcgacct
     1381 cgacgtgccg ctcgccgaag acgatgcctg acacccccct ggtcatcaac ggctggaaga
     1441 tcttcgccca cccgctgttc ctcgatcagt tcgaaaacct gatccaggca gccgaaacca
     1501 agcgggcaaa ggatccccag ggctacaccg ggtcggccgc ggccaagaag ctgaaagcgg
     1561 ttggcgatct ggtgttcagc atcatcccgt cggatccggc gcatcccaaa ttccgccagg
     1621 gcggcaccct gggcgaggaa cacaagcact ggtttcgcgc caagttcttc gagcgctacc
     1681 ggctgttctt ccgctatcgc accgacgtca aggtcatcgt ctacgcctgg ctgaacgacg
     1741 aagacagctt gcgggccaag ggcagccgga acgatcccta tgccgtcttc cagggcatgc
     1801 tggcgggcgg caatccgccc gacgactggg gatgacctgc tggcggcctg cgcgacccgg
     1861 gaagcccagg accggctgca ggccgccaca tatggttact tcttcaccag atcccggtac
     1921 gcatgccagc tggcatgggc ggcgatgggc agggtgacgg ccaggccggc gaagaagaag
     1981 gcgatgccca acaggccgag cgtcgccagg gtcgcggccc agccgatcat gttgcggcgg
     2041 ttcagccaca ccacccgcag cgacgtgcgc atggcggtca gcacgctgac gtcgcggtcc
     2101 agcagcatgg gcatggacac caccgacagg gcgaaggcca aggccgcgat ggcgccgccg
     2161 accagggtgc cggtcagcag gaacaggcta cct
//
LOCUS       DATIKR010000257         3142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40601, whole genome shotgun sequence.
ACCESSION   DATIKR010000257 DATIKR010000000
VERSION     DATIKR010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40601"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1051)
                     /locus_tag="VLL76_03920"
     CDS             complement(<1..1051)
                     /locus_tag="VLL76_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HSV28674.1"
                     /translation="MSPPGPSRIVLPHVPALVVGVKQAVLLDTDGEFHSMTPREAARR
                     VRDDGPLVCHAPAVAGRLGLDHFPALDILELFAFVRPARFCLPTPKGVAEAMGLVRPA
                     DLEDEAEALIRCARKLLEELAERVPQDTAARQGDVKGAAWAMARAGWSWGTAVLSALG
                     VSGDSRANALRVWERLPEWSEHAPEPPPGNIPVDPVEARQRLERMLGAGAEQRPTQAD
                     YSSAATAAFQPRDRVGEPRLVLAEAGTGTGKTLGYIAPASLWAEKNGAPVWISTHTRN
                     LQRQLDSELDRLFADPNDKARKVVVRKGRENYLCLLNFEEQVTRNRPADAVATGLMAR
                     WTMATRDGDMVGGDFP"
     gene            complement(1059..1598)
                     /locus_tag="VLL76_03925"
     CDS             complement(1059..1598)
                     /locus_tag="VLL76_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28675.1"
                     /translation="MTTVVEVEGGRLPPEHHLPAYNPVYERLVRGDDDLVGLVAYGLY
                     KQSKRDWIKRYFDKHGASPSDDLLLDYVDRYSDADLNRFREQAEDMMLRFAEVMVEDR
                     APLIREEGLTAALSARLDAFGDLIRDNSGLKMNVAANILANLILGGVTLILVLGVYFA
                     PDIPDIAKSIAQWVKGEGG"
     gene            complement(1601..1792)
                     /locus_tag="VLL76_03930"
     CDS             complement(1601..1792)
                     /locus_tag="VLL76_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28676.1"
                     /translation="MSTYTSARTASMGFVVRRDSASGRFTDTVSDKLYRLPDGKIVRT
                     VDGNLFEKAVKAATATQKK"
     gene            1953..2402
                     /locus_tag="VLL76_03935"
     CDS             1953..2402
                     /locus_tag="VLL76_03935"
                     /inference="COORDINATES: protein motif:HMM:NF025203.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HSV28677.1"
                     /translation="MSHLSLPLILFALVMGGAAYSQSGQSDQQAVAPPGPGGGRMPMM
                     QQLDTDNDGSVSREEFMAGHQMRQQGYTAADTDKDGAISREEFMQAGQQRREERFREL
                     DRDNDGRLTQAEMSDRASAMFRAMDANQDGKLSQDEIRMRQGKGPRP"
     gene            2505..3074
                     /locus_tag="VLL76_03940"
     CDS             2505..3074
                     /locus_tag="VLL76_03940"
                     /inference="COORDINATES: protein motif:HMM:NF024600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28678.1"
                     /translation="MRSWPLILAVAALLPVTAAAQMAPSEGGRAAYARFKAMDRDNDR
                     ALSLAELRKAGGERASAGLFLMLDADGDGRLSLKEVEGAGGSARLGRFEAYDVDKNGY
                     VLRREFPKVLDPRLVAALDRNGDARLSLREIRSSFAGARAVRPDTPTARKSARVERGE
                     QTLCWVPNFGSADRWLIEMPVLGGGCRTQ"
BASE COUNT          504 a         1051 c         1107 g          480 t
ORIGIN      
        1 cggggaaatc gccgcccacc atgtcgccat cgcgggtcgc catggtccag cgcgccatca
       61 ggccggtggc gacggcgtcg gcggggcggt tgcgcgtgac ctgttcctcg aaattcagca
      121 ggcacaggta attctctcgc cccttgcgca ccaccacctt gcgcgccttg tcgttggggt
      181 cggcgaacag gcggtcaagc tcgctgtcca actggcgctg taggttgcgg gtgtgggtgc
      241 tgatccacac cggggcaccg ttcttttccg cccacaggct ggcgggggcg atgtagccca
      301 gggtcttgcc ggtgccggtg ccggcctcgg ccagcaccag gcgcggctcg cccacccggt
      361 cgcgcggctg gaaggcggcg gtggcggccg aggaataatc ggcctgggtc gggcgctgct
      421 cggcgccggc gcccagcatg cgctccagcc gctggcgcgc ctcgaccgga tcgaccggga
      481 tgttgccggg cggcggctcg ggggcgtgct cggaccattc cggcaggcgc tcccataccc
      541 gcagtgcatt ggcgcgcgaa tcgcccgaga cgcccagcgc ggacagcacg gcggtgcccc
      601 agctccagcc cgcccgcgcc atggcccagg cggcgccctt gacgtcgccc tggcgggcgg
      661 cggtgtcctg cggcacccgc tcggccaatt cctccagcag cttgcgggcg cagcggatca
      721 acgcctctgc ctcatcctcc agatcggccg gccgcaccag ccccatggcc tcggcgacgc
      781 ccttgggggt gggcaggcag aagcgggccg ggcggacgaa ggcgaacagc tcgaggatgt
      841 cgagcgccgg gaagtggtcg agtcccagcc ggccggccac cgccggggcg tggcacacca
      901 acggcccgtc gtcgcgcacc cgccgcgccg cctcgcgcgg ggtcatggaa tggaactcgc
      961 cgtcggtatc cagcagcacg gcctgcttca cccccaccac caaggcgggg acgtgcggca
     1021 ggacgatgcg ggagggaccg ggcggcgaca tggggcgatc agcccccctc gcccttgacc
     1081 cactgcgcga tggattttgc gatgtcggga atgtccgggg cgaaataaac gcccagaacc
     1141 aggatcaagg tcacgccgcc aagaatgaga ttggcgagga tgttcgccgc cacattcatc
     1201 ttcagaccgg aattgtcgcg gatcagatcc ccgaaggcgt cgagtcgggc cgacagggcg
     1261 gcggtcagcc cttcctcgcg aatgaggggg gcgcgatcct cgaccatgac ttcggcgaat
     1321 cgaagcatca tgtcttcggc ctgctcccgg aaccggttga ggtcggcatc ggaatagcga
     1381 tcgacgtagt caagcaaaag gtcgtcgctg ggcgaggcgc catgcttgtc gaagtaacgc
     1441 ttgatccagt cccgcttgct ttgcttgtaa agcccatagg ccacgaggcc gacaaggtcg
     1501 tcatcgccac ggaccaagcg ttcatagacc ggattgtaag ccggaaggtg atgttcagga
     1561 gggaggcgtc cgccttcgac ctcgacgacc gtggtcatcg ctatttcttt tgggtcgccg
     1621 tcgccgcctt gacggccttt tcgaacaggt tgccatcgac agtgcggacg atcttaccat
     1681 ccggcagacg gtagagcttg tcgctgaccg tgtccgtgaa gcgaccagag gcggagtccc
     1741 gtcggacgac gaagcccatg gatgcggttc ttgcggacgt gtaggtggac atcgcggcct
     1801 tccctgttgc ccgcccaata tgaggtcttc cgccagccga agcaagcatc tccggccatt
     1861 gcggctgcgc cggaaggggg cctctcgaac gggcacttgg acagggttgg ttggatgcgc
     1921 accctgatcg caaatagctc ggaggttttc ccatgtccca cctttccctg cctctgatcc
     1981 tgttcgccct ggtcatgggc ggcgccgcct attcgcaatc gggccagtcg gaccagcagg
     2041 cggtggcgcc gccgggaccc ggcggcgggc ggatgccgat gatgcagcag ctcgacaccg
     2101 acaacgacgg ctcggtcagc cgcgaggagt tcatggccgg ccaccagatg cgccagcagg
     2161 gttacaccgc cgccgacacc gacaaggatg gcgccatcag ccgcgaggaa ttcatgcagg
     2221 ccggccagca gcgccgcgag gaacgcttcc gcgaactcga ccgcgacaac gacggccgcc
     2281 tgacccaggc cgagatgtcc gaccgcgcct cggccatgtt ccgcgccatg gacgccaacc
     2341 aggacggcaa gctgagccag gacgaaatcc gcatgcgcca gggcaagggg ccgcgtccgt
     2401 agggacagcg gcaccccgca aggggagggg ctatccgtcc gcgcgccgcc ttcggcatcc
     2461 gtcactagcc atgtgtggtg gagacgagcc gaaggaggaa aaccatgcgt tcatggcctc
     2521 tcatccttgc ggtggccgcg ctgctgccgg tgaccgccgc cgcccagatg gcgccctcgg
     2581 aaggcgggcg ggcggcctat gcccgcttca aggcgatgga ccgcgacaac gaccgcgccc
     2641 tgtcgttggc ggaattgcgc aaggcggggg gcgagcgggc gtcggccggc ctgttcctga
     2701 tgctggatgc cgacggcgac ggacgcctgt cgctgaagga ggtcgagggc gccggcggca
     2761 gcgcccggct gggccggttc gaggcctatg acgtcgacaa gaacggctat gtgctgcggc
     2821 gggaattccc caaggtgctc gacccccggc tggtggcggc gctcgaccgc aacggcgatg
     2881 cccgcctcag cctgcgcgag atccggtcga gcttcgccgg ggcgcgggcg gtgcggcccg
     2941 acacgcccac cgcgcggaag tcggctaggg tcgaacgcgg tgagcagacg ctgtgctggg
     3001 tgcccaattt cggctcggcc gaccgctggc tgatcgaaat gccggtgctg ggcggcggct
     3061 gccgcaccca atagtgacag ggccgggcgg cggtggttga atgggcgcgc aaccattgcg
     3121 ctgggaggcg cccatgctcc gc
//
LOCUS       DATIKR010000258         2422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_28161, whole genome shotgun sequence.
ACCESSION   DATIKR010000258 DATIKR010000000
VERSION     DATIKR010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28161"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1040)
                     /locus_tag="VLL76_03945"
     CDS             complement(<1..1040)
                     /locus_tag="VLL76_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28679.1"
                     /translation="MNGLTVKSRIYGGFFILLAFLAFVSGFAVLQFKGVGQDVAGYGS
                     AVTDTVNVLKIDRAVTDMRRMVLGFIDKGDPKTADAIRSTIATLRKDLQAAAAINPEI
                     ENRTALEDMVRVLDQYAVVFDKAAELRIKRDKIIVDELAPMGNQAVQHLEGLAQASSD
                     EKDWETGTYAGRAMQELLNARLNVLRYLTYPDQKTADFINDRFTGLSKVLAKLAETEK
                     DPAHRRAIQAAADLVPPYQKGFAGLVANMNELDRLVTKDLPELGLSFAEIAGKVRDAE
                     LTGMAETQQSVSSDISATTSLTIVLALVALGLGLAFAYLIARSIINPITGMTHAMTDL
                     AGGQLDVAVPAL"
     gene            complement(1058..1525)
                     /locus_tag="VLL76_03950"
     CDS             complement(1058..1525)
                     /locus_tag="VLL76_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSV28680.1"
                     /translation="MSEDATRQFISFTIGTEEYGVDIMAIREIMGWTVTTELPNTPDY
                     MRGVINLRGAIVPILDLRARFGGAQTEALPRHVIMVVAVGTRVAGLLVDAVADIITVS
                     TADIQPIPQLDRADTAGFLTGLVTVEGRMVALLDLDRVFDFDEMGDLVDTVAA"
     gene            complement(1639..>2422)
                     /locus_tag="VLL76_03955"
     CDS             complement(1639..>2422)
                     /locus_tag="VLL76_03955"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28681.1"
                     /translation="VRSDPALLSRIVQNLMSNAVRYTRRGRILLGCRRQGRSLSIEVW
                     DTGIGIPEDRRADIFDEFTQLGNPERDRSQGLGLGLAIVKRLAGLLGHRVAVRSVPGK
                     GSVFSVALPLASQQSDRGRAKPLALNLGDGSRLVVLIDDEPIVLKGLALVLQSWGYEV
                     LAATSEAEAIEKLEALRRAPSLILADYRLREGHTGTEAVANIRTLFNSAIPSIIITGD
                     TAPERLREAEASGLSILHKPIQPPTLREIVAETLARSGPTLH"
BASE COUNT          398 a          756 c          849 g          419 t
ORIGIN      
        1 tcgagcgccg gcaccgcgac gtcgagttgg ccgccggcca aatcggtcat ggcgtgggtc
       61 atgccggtga tcgggttgat gatcgagcgc gcgatcaggt acgcgaaggc caggcctagg
      121 ccaagcgcca ccaaagcgag gacgatggtc agtgaggtgg tggcggaaat gtcggacgac
      181 acgctctgct gcgtctcggc catgccggtc agttcggcat cgcgcacctt gccggcgatc
      241 tcggcgaaac tcaggcccag ctcgggcagg tccttggtga ccaggcggtc gagctcgttc
      301 atgttggcga ccaagccggc gaagcccttc tggtagggcg gcaccaggtc ggcggcggcc
      361 tggatggcgc ggcggtgggc cgggtccttc tctgtctcgg ccagcttggc cagcaccttg
      421 ctcaggccgg tgaagcgatc gttgatgaag tcggcggtct tctggtcggg ataggtgaga
      481 tagcgcagca cgttcaggcg cgcgttcagc agttcctgca tggcgcggcc ggcataggtg
      541 cccgtctccc aatccttctc gtcggaagaa gcctgggcca ggccttcaag gtgctgcacc
      601 gcctggttgc ccatgggggc aagctcgtcg acgatgatct tgtcgcgctt gatgcgcagt
      661 tccgccgcct tgtcgaacac caccgcatac tggtcgagca cgcgcaccat gtcttccagg
      721 gcggtccggt tctcgatctc cgggttgatc gcggctgccg cctgcaggtc cttgcgcagg
      781 gtcgcgatgg tcgagcggat ggcgtcggcg gtcttggggt cgcccttgtc gatgaacccc
      841 agcaccatgc ggcgcatgtc ggtgacggcg cggtcgatct tgaggacgtt gacggtgtcg
      901 gtcaccgccg agccatagcc ggcgacgtcc tggccgacgc ccttgaactg caacaccgcg
      961 aagcccgaca cgaaggccag gaacgcgagc aggatgaaaa agccgccgta gatgcggctt
     1021 ttgaccgtca ggccgttcat tgtattcccc caaaaactca agcggcgacg gtatcgacca
     1081 gatcgcccat ttcgtcgaag tcgaagacgc ggtccaggtc gagcagcgcc accatgcggc
     1141 cctcgacggt caccagaccg gtcaggaagc cggcggtgtc ggcgcgatcc agttgcggga
     1201 tcggctggat gtcggcggtc gagaccgtga tgatgtcggc caccgcgtcg accagcaggc
     1261 cggcgacacg ggtgccgacg gcgaccacca tgatgacgtg gcgcggcaac gcctcggtct
     1321 gcgccccccc gaaccgggca cgcagatcga ggatgggaac gatggcgccg cgcaggttga
     1381 tcaccccgcg catgtagtcg ggggtgttgg gcaactcggt ggtgaccgtc cagcccatga
     1441 tctcgcggat tgccatgatg tcgacgccgt attcctcggt gccgatggtg aacgagatga
     1501 attggcgcgt tgcgtcttcc gacattgctt cccctccaga ctggcgagca gtgggtagac
     1561 tatccgaaag ggcagggtgc gagaaggggg aagaatgtgt ctaaatctca accccaacca
     1621 taagtaatat ctgatatttc agtgcagcgt cgggccgctg cgcgccagcg tctcggccac
     1681 gatttcgcgt agggtgggcg gctggatggg cttgtgcagg atggacaggc cgctggcctc
     1741 ggcctcgcgc agccgttccg gggcggtgtc gccggtgatg atgatgctgg ggatggcgct
     1801 gttgaacagg gttcggatgt tggccacggc ctcggtgccg gtgtgccctt cgcgcaggcg
     1861 gtagtcggcc aggatcaggc tgggggcgcg gcgcagggct tcgagcttct cgatggcctc
     1921 ggcctcggag gtggcggcca gcacctcgta gccccagctt tgcaggacca gcgccaggcc
     1981 cttcagcacg atcggctcgt cgtcgatcag caccaccagc cggctaccgt cgccgagatt
     2041 gagggcgagc ggcttggcgc gcccccgatc ggattgctgc gacgccagcg gcagcgccac
     2101 cgagaacacc gaccccttgc cgggaaccga gcggacggcc acgcggtggc ccagcaatcc
     2161 ggccagacgc ttgacgatcg ccagccccag tcccaatccc tgcgagcggt cgcgctcggg
     2221 atttcccaac tgggtgaatt cgtcgaagat gtcggcccgg cggtcctcgg ggatgccgat
     2281 gccggtgtcc cacacctcga tggacagcga gcggccctgg cggcggcagc caagcaggat
     2341 gcgcccgcgc cgggtatagc gcacggcgtt ggacatcagg ttctgcacga tgcgggacag
     2401 cagcgccggg tcgctgcgca cc
//
LOCUS       DATIKR010000259         4655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_185137, whole genome shotgun sequence.
ACCESSION   DATIKR010000259 DATIKR010000000
VERSION     DATIKR010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4655
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185137"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="VLL76_03960"
     CDS             <1..1144
                     /locus_tag="VLL76_03960"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSV28682.1"
                     /translation="GDEAHASAFGDGLPVEDAEVWMNQADGTQACLLLSATPIRGEGA
                     VWKGSRGVCRDVTQERLRDAALVRANNRERLLSYIVRTIRDEVDPADMLRAAAEATAR
                     ALGASGCQIFRILPDASDFAVAAQFGEVGDEKPVLDSFLEADHFDADAAGWHVLATVS
                     RYRHSINGAIVLWRNPQRPPWSDDDRLLIDDVSNQVGLANEQIANHERILKLSRTDSL
                     TGLFNRRAFFEEIARRFNRLSREHRPAALIYVDLDNFKAVNDVHGHQAGDQALLAVRE
                     LLLQHTRPIDIVARLGGDEFAIWLEGAEERIAVQRCNALLGAAVELQRYSGMPERPLG
                     FSLGLAVHGGASKEGLEELIARADKVMYEVKRDGKGAWRLAPAAEA"
     gene            1149..2426
                     /locus_tag="VLL76_03965"
     CDS             1149..2426
                     /locus_tag="VLL76_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HSV28683.1"
                     /translation="MVVGLLAKLFKGRTRPIGYEEARELAAHKDPALRAELAARDDIR
                     PEILYFLAEDTSTEVRRRVAANPNSPPHADLMLAGDQDPAVRSDLAGKIARVAPGLTA
                     NEQDRLRRMTYEALEMLARDQIPKIRAILSDTLKDVANAPPEVIRRLARDAEIAVAAP
                     VLQFSPVLTDEDLLEIIESSPIPGALSAISKRSLVNVRVADAIAATDDVDAIAVLLGN
                     SSAQIREETLDRLADRAADIEAWHGPLVNRPHLPSKTATKLARFVASNLLQQLAERKD
                     LPPDAAMAVAAVVRKRLDEMEATGPARAEARKAADETAAVMRAKTMHAAGQLNESAVD
                     AALSGGDHPFVTAALALMAQLSQPTLKKIVATQSAKGIVAVAWKAGLSPELSVHLQTK
                     LLRLTSSRVLHPRGGAYPLTVEEMEWQLEFLGD"
     gene            2428..3642
                     /locus_tag="VLL76_03970"
     CDS             2428..3642
                     /locus_tag="VLL76_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009894344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV28684.1"
                     /translation="MRRPVWLNPAVLTIFAAGATMMSVSMGARQAQGLLMNPLSEERG
                     WPLATFSLAVALHNLLWGAFQPFTGAAADRFGAARVAAIGTLAFAVGMMMVAMGDATL
                     TIVGLGLVSGFGLAATSFAVVLGPVGRAVAPEHRTSAMGIGSALGSLGMMAMIPVAQA
                     LIANLGPTGAVWVLSTFSIAALPLALLLHKGEEAARKTQAAFARSQTIRQALAEAWTH
                     PGYRLLTLGFFVCGFQVTFIGVHLPGYLALCGMTKGAGATALLTIGAFNVIGTYLMGR
                     LSQVYRPKYVLSAIYLGRAVVTFLFVMGPKNEVTLLAFAASIGLLWLSTVPPTTGLIA
                     HVFGPRHLGLLFGMVFFSHQIGSFLGSWLGGIIYDATLSYDVMWMVTAALGIAAALLH
                     LPIGDRSLRQPA"
     gene            3738..>4655
                     /locus_tag="VLL76_03975"
     CDS             3738..>4655
                     /locus_tag="VLL76_03975"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV28685.1"
                     /translation="MGRNGRILLGCGFLGLGAWSVVPGMIHPISTDAVVNAEVVTVRA
                     PVDGRLTVGQRLVVGDRVELGDELGRVRADRPDTGRRDALSLDLAAQRQLAAALADEE
                     RELAALEGELARRGLSYRQAQRRRLDLSRSELRARIAAALADLGRAEAELERKRILVA
                     KGHLAPVTEKTAQAAVASARAEVAAGRAELGRVEAELAALGRGIVASDDATYSGQRRD
                     EIRITRAARRVEAAQAQVRVAELARQLAAENGRAASEVVMAAPIKGVVWQRFAAEGDA
                     VRRGDPVAGVVDCDRLFLTAVLPKRYFPEL"
BASE COUNT          658 a         1717 c         1594 g          686 t
ORIGIN      
        1 gggcgacgag gcccatgcct cggccttcgg cgacggcctg ccggtcgagg acgccgaggt
       61 gtggatgaac caggccgacg gcacccaggc ctgcctgctg ctgtcggcca cgccgatccg
      121 cggcgagggc gcggtgtgga agggctcgcg cggggtctgc cgcgacgtca cccaggaacg
      181 cctgcgcgac gccgccttgg tgcgcgccaa caaccgcgaa cgcctgctgt cctacatcgt
      241 ccggaccatc cgcgacgagg tcgatcccgc cgacatgctg cgcgccgccg ccgaggccac
      301 cgcgcgggcg ctgggcgcct cgggctgcca gatcttccgc atcctgcccg acgcctcgga
      361 cttcgccgtc gccgcccagt tcggcgaggt cggcgacgag aagccggtgc tcgattcctt
      421 cctggaagcc gaccatttcg acgccgacgc cgccggctgg cacgttctgg ccaccgtcag
      481 ccgctaccgc cattccatca acggcgccat cgtgctgtgg cgcaatcccc agcgcccgcc
      541 gtggagcgac gacgaccgcc tgttgatcga cgacgtgtcg aaccaggtcg gcctcgccaa
      601 cgagcagatc gccaaccacg agcgcatcct caagctgtcg cgcaccgatt cgctgaccgg
      661 cctgttcaac cgccgcgcct tcttcgagga gatcgcgcgc cgcttcaacc gcctcagccg
      721 cgagcaccgc cccgccgccc tgatctacgt cgacctcgac aatttcaagg cggtcaacga
      781 cgtgcacggc caccaggccg gcgaccaggc gctgctggcg gtgcgcgaac tgctgctgca
      841 gcacacccgg cccatcgaca tcgtcgcccg cctgggcggc gacgaattcg ccatctggct
      901 ggaaggcgcc gaggagcgca tcgccgtgca gcgctgcaac gccctgctgg gggcggccgt
      961 ggagctgcag cgctattccg gcatgccgga gcggccgctc ggcttctcgc tgggcctggc
     1021 cgtgcacggc ggcgccagca aggaaggctt ggaagaattg atcgcgcgcg cggacaaggt
     1081 gatgtacgag gtcaagcgcg acggcaaggg cgcctggcgc ctggcgccgg cggcggaggc
     1141 ctgagcccat ggtcgtcggt ctgctggcaa agctgttcaa gggccgcacg cgccccatcg
     1201 gatacgagga agcgcgcgaa ctggccgccc acaaggaccc ggccctgcgc gccgaactgg
     1261 cggcgcgcga cgacatccgg cccgagatcc tgtatttcct ggccgaggac accagcaccg
     1321 aggtccgccg ccgcgtcgcc gccaacccca actcgccgcc ccatgccgat ctgatgctgg
     1381 ccggcgacca ggacccggcg gtgcgctccg accttgccgg caagatcgcc cgcgtcgccc
     1441 ccggcctgac tgccaacgag caggaccgcc tgcgccgcat gacctacgag gcgctggaga
     1501 tgctggcgcg cgaccagatc ccgaagatcc gcgccatcct gtccgacacc ctgaaggacg
     1561 tcgccaacgc cccgcccgag gtgatccgcc gcctcgcccg cgacgccgag atcgcggtgg
     1621 cggcccccgt gttgcaattc tcgccggtgc tgaccgacga ggacctgctg gaaatcatcg
     1681 aatccagccc gatccccggc gcgctgtcgg ccatctctaa gcggtcgctg gtcaacgtgc
     1741 gggtggcgga cgccatcgcc gccaccgacg acgtcgacgc catcgccgtg ctgctgggca
     1801 attcctcggc ccagatccgg gaagagactt tggaccgcct ggccgaccgc gccgccgaca
     1861 tcgaggcgtg gcacggcccg ctggtcaacc gcccgcacct gcccagcaag acggccacca
     1921 agctggcccg cttcgtcgcc tcgaacctgc tgcagcaact ggccgaacgc aaggacctgc
     1981 cgcccgacgc cgccatggcg gtggccgccg tggtgcgcaa gcgcctggac gagatggagg
     2041 caaccggccc cgcccgcgcc gaggcaagga aggccgccga cgaaaccgct gcggtgatgc
     2101 gcgccaagac aatgcatgcc gccgggcagc tcaacgaaag cgcggtggac gcggcgttgt
     2161 cggggggcga ccaccccttc gtcaccgccg ccctggcgct gatggcgcaa ttgtcgcagc
     2221 cgacgctgaa gaagatcgtc gccacccaga gtgccaaggg catcgtcgcg gtggcgtgga
     2281 aagccggcct gtcgcccgaa ttgtcggtcc acctgcagac caagctgttg cgcctgacct
     2341 ccagccgggt gctgcacccg cgcggcggcg cctatccgct gaccgtcgag gagatggagt
     2401 ggcagctcga gttcctgggc gactgacatg cgccgccccg tctggctcaa ccccgccgtc
     2461 ctgaccatct tcgccgccgg cgccaccatg atgagcgtca gcatgggcgc ccgccaggcc
     2521 cagggcctgc tgatgaaccc gctgtccgag gaacgcggct ggccgctggc caccttctcg
     2581 ctggcagtgg cgctgcataa cctgctgtgg ggcgccttcc agcccttcac cggcgccgcc
     2641 gccgaccgct tcggcgccgc ccgcgtcgcc gcaatcggca cgctcgcctt cgccgtcggc
     2701 atgatgatgg tcgccatggg cgacgccacc ctgaccatcg tcggccttgg cctggtgtcg
     2761 ggcttcggcc tggccgccac cagcttcgcc gtggtgctgg ggccggtggg ccgggcggtg
     2821 gcgccggaac accgcacctc cgccatgggc atcggctcgg ccctggggtc gctcggcatg
     2881 atggcgatga tcccggtggc gcaggcgctg atcgccaatc tggggccgac cggcgccgta
     2941 tgggtgctgt cgaccttctc catcgccgcg ctgccgctgg cattgctgct gcacaagggc
     3001 gaggaagcgg cgcgcaagac ccaggcggcg ttcgcccgca gccagaccat ccgccaggcc
     3061 ctggccgagg cctggaccca tcccggctac cgcctgctga ccctgggctt cttcgtctgc
     3121 ggcttccagg tcaccttcat cggcgtccac ctgcccggct atctggcgct gtgcggcatg
     3181 accaagggtg ccggcgccac agcgctgttg accatcggcg ccttcaacgt gatcggcacc
     3241 tacctgatgg gccgcctgtc ccaggtgtac cggccgaaat acgtgctgtc ggccatctat
     3301 ctgggccgcg cggtcgtcac cttcctgttc gtgatggggc cgaagaacga ggtcacgctg
     3361 ctggccttcg ccgcctccat cggcctcttg tggctgtcca ccgtgccgcc caccaccggg
     3421 ctgatcgccc atgtgttcgg gccgcgccat ctcggcctgc tgttcggaat ggtgttcttc
     3481 tcgcaccaga tcggcagctt cctcggctcg tggctgggcg gcatcatcta tgacgccacc
     3541 ctgtcctacg acgtcatgtg gatggtcacc gccgccctgg gcatcgccgc cgccctgctc
     3601 caccttccca tcggcgaccg cagcctgcgc cagccggcct gacgaatcag tctatcgccg
     3661 ccgcgcatcg gcaccgcttg ccgccttgtt aaccccaccc ggccttactg gcgccctgga
     3721 acaggaaggg gtgcgtcatg ggccgcaacg ggcggatctt gctgggctgc ggatttctcg
     3781 gcctgggagc gtggtcggtg gtgccgggga tgatccatcc catcagcacc gacgccgtgg
     3841 tcaacgcaga ggtggtgacg gtgcgggcgc cggtggacgg ccggctgacg gtgggccagc
     3901 ggctggtggt gggcgaccgc gtcgaattgg gcgacgaatt ggggcgcgtg cgcgccgacc
     3961 gccccgacac cggccgccgc gacgccctgt ccctcgatct cgccgcccag cgccaactgg
     4021 cggcggccct ggccgacgag gagcgcgaac tggcagcgct ggagggcgag ttggcccggc
     4081 gcgggctgtc ctatcgtcag gcccagcgtc gccgactcga cctgtcgcgc tcggaactgc
     4141 gcgcccggat cgcggccgcg ctggccgatc tggggcgggc cgaggcggag ctggagcgca
     4201 agcggatcct ggtcgcgaag ggccatctgg cgccggtgac ggagaagacg gcccaggccg
     4261 ccgtcgcctc ggcccgcgcc gaggtggcgg cgggtcgcgc cgagttgggc cgcgtcgagg
     4321 ccgaactcgc ggctttgggt cgcggcatcg tggcctcgga cgacgccacc tattccggcc
     4381 agcgccgcga cgaaatccgc atcacccgcg ccgcccgccg ggtggaggcg gcgcaggccc
     4441 aggtccgggt ggcggaactg gcgcggcaat tggcggccga gaacggccgt gccgcgtccg
     4501 aggtggtgat ggcggcgccc atcaagggag tcgtgtggca gcgcttcgcc gccgaggggg
     4561 acgcggtgcg gcggggcgat ccggtggccg gagtggtcga ttgcgaccgc ctgttcctga
     4621 ccgccgtgct gcccaaacgc tatttccccg aattg
//
LOCUS       DATIKR010000260         8063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_28165, whole genome shotgun sequence.
ACCESSION   DATIKR010000260 DATIKR010000000
VERSION     DATIKR010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 8063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8063
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28165"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..4572)
                     /locus_tag="VLL76_03980"
     CDS             complement(<1..4572)
                     /locus_tag="VLL76_03980"
                     /inference="COORDINATES: protein motif:HMM:NF025611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4347 domain-containing protein"
                     /protein_id="HSV28686.1"
                     /translation="MGRLDRSILALVRNNRGRKDHRQDLKAHVSPLGFALEPRMMFDG
                     AAAATIAEAAQPAPEPAPAPEPAADAPEADLADALASLSPPAAADARREIVFIDQSVP
                     DYQSVVGMVKPGAEVVLISSDTDGFDRIADYLEETGPADAIHIVGHGTDGSVSLGGAT
                     LNAAGMDAHADDLARINAGLNDGADVLLYGCNVAKSDAGVALVADLSQRLGADVAASV
                     DATGSDTKGGDWDLEHATGAIETELFAASDRLAEYDGVLPGVNVNITFDDGVSSNVDD
                     HTIKYTVDGVALVAAGTSSLPILNADGVASHWSEGFLTLSFEGSTFTVTSLSVFTNLL
                     TSIEFTSNRGTETKTGLTLEASNPLTFSGAFWTDISWLKVTAADGDASIDNLVATVTS
                     SNTAPTNTVPGAQTVSEDGTLTMTSAFSVTDPDAGNTITTTLSVPGGKGTISVATGGG
                     GTISTNGTNSVQIVGTAAQVNAALATVTYTPPADANGTGYATLTMTTSDGTATDTDTV
                     TINVTGIADTPTATNVTTAEDTQSGLITLGRNAADSTEVTHFKITSITGGTLYLADGV
                     TQVSDGAFITYAQGAAGLKFTPSANSTSNGSFNVQGATSAGGAGLSAGSATSTVTVTS
                     VADAPTVTNATTNEDTQSSSGLFIGRNAVDTTDITHFKITGITGGTLYKNDGSTQISN
                     NDFITYAEAQAGLKFTPSANSTSAGSFQVAGARDAAGTGLGTASTATITVNAVNDAPV
                     NTVPGGQVGNEDSPITVTGGYSVADVDGDNLTTTLSVAAGTISVVTGGGATITGNGGS
                     SVQIQGTAAQVNAALGTVTFQGAANASGAVTLTMATSDGTVTDTDTVTYTVSAVNDAP
                     TVGGVSNFAATEQAGSAYVMSGFTTSDIDNGGSYDGAVLTIKQNTYLSNEYLSITNGN
                     NVVYTYGTPGTVTYNGVTVATAGYVDSGQGLHDLQITFNAAADAAAVQAVGRQVVFWT
                     TDDNPTAYDATGTRTMTVTFSDGGYTGSGGAQTATATATLTVNGVNDVSVLATPTEGA
                     AYTEGGAGAAIAGAVAISDVDNQTLASATLTVTDFVAGDTLSFTNNPATMGNVAASYN
                     AATGVLTLTSAGSTATLAQWQAAIRSVTFTSTSDNPTAYGADTGRNISITVNDGAGNS
                     NTLTSTGTTVDITAVNDVPVVTATGGNAGWVPGQGAVVVDAGLTLADADSTNLSGATA
                     VLTGRPDGTDENLALTTAAQAAADGAGVTYAYDTASGTLTLTGSATVATYQTILRGLT
                     FDNAAGTPTTAGHTVTFTVVDSAAGSSIAATRGLVVNQLPTVDNHAGTVAEGATLTLD
                     NTMLGATDPEGTATGAALVYTVTTLPTKGTLYKSGVAIGLNGTFTQADIDGGIITYTH
                     DGSETTSDSATYSISDGVGTRTGQTFAITVTPVNDAPTLDNLAADNLAYAEGAGAVVI
                     DQGTLAAVADVDTNDFRGGSLTVTFTAGSDNAEDVLAIRNEGTGAGQISIDGTNVKYG
                     SDIIGTVTGGTGGTALTITFVNGAEASKAA"
     gene            4986..5519
                     /locus_tag="VLL76_03985"
     CDS             4986..5519
                     /locus_tag="VLL76_03985"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HSV28687.1"
                     /translation="MSEIRLFTYDFPMTGWANCDGTLLPVAQNQALFVLISNTFGGNG
                     TTNFALPDMRGRLGICQGVLPNTTSVYVRGQTGGTEAVQLTASQVPSHNHQMYASADT
                     TSLATTNSNCYLGNAAQAPADPNAPNNLYTTEYVPVTLRADAVAQTGGNVGHNNCMPS
                     IGLKFCIATLGIFPSRN"
     gene            5539..6090
                     /locus_tag="VLL76_03990"
     CDS             5539..6090
                     /locus_tag="VLL76_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020298941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HSV28688.1"
                     /translation="MDAYIGEIRLFAGGYNPENWALCDGRQMTISQNQVLFSLIGTTY
                     GGNGTTYFNLPDLRGRAPVGIGQGTGLTMRNLGNQWGAENVTLDSSNLPPHTHPFTVS
                     TGAATNIAPNGALLGAATTTISGTNYNVPYFDDGVSPVVTPVQMNSGSVSSAGYSQAH
                     TNQQPYIVINYIICLVGTYPQRP"
     gene            6104..6667
                     /locus_tag="VLL76_03995"
     CDS             6104..6667
                     /locus_tag="VLL76_03995"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HSV28689.1"
                     /translation="MDPFTGEIRMMANTYAPMDWANCDGTTLYIQQQAMLFAVIGNRY
                     GGDGVNNFKLPNLQGRTPIGMGQGPGLPNYAVGATGGFETVAINSGQMPAHNHNVNVF
                     SSPGDKAPGNTTLLARGFVSTVPPTNRYRKFYDTAMAGPQMLDNRTIGAACGNQVGGA
                     NVHENRQPYLVLNYYICMYGEFPVKAQ"
     gene            6896..7396
                     /locus_tag="VLL76_04000"
     CDS             6896..7396
                     /locus_tag="VLL76_04000"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV28690.1"
                     /translation="MPPKGVTLRPITDADLPMLRDLYASTRAWEMSHSGWPIEQQQEF
                     LTNQFSYQHQSYTTNYPGATLDVVERDGESVGRLYVHRTSEELRIIDICFFPQYCGQG
                     MGGALLTELLSEADALGVPATIHVEKFNLGAKRLYQRLGFSLKEDRGVYELLAAGQGA
                     LRGAAE"
     gene            complement(7436..7762)
                     /locus_tag="VLL76_04005"
     CDS             complement(7436..7762)
                     /locus_tag="VLL76_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28691.1"
                     /translation="MADICLKSVTCAAFDPYEGAEFTVTAFGNEYTFTLADAQALPAP
                     KVVPAGCRAEPFTLKFKGPEDVHLPQGTYTVSNAQCGTAEIFLVPVTEMPGGDASTVV
                     YQAVFN"
     gene            complement(7874..>8063)
                     /locus_tag="VLL76_04010"
     CDS             complement(7874..>8063)
                     /locus_tag="VLL76_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pirin-like C-terminal cupin domain-containing
                     protein"
                     /protein_id="HSV28692.1"
                     /translation="VAIGGAPLGQRFIEWNFVSSSRDRIEQAKADWRAGRMKLPDLDD
                     REFIPLPPDPPPPANPMS"
BASE COUNT         1310 a         2589 c         2723 g         1441 t
ORIGIN      
        1 cgccgccttg gacgcctcgg cgccgttgac gaaggtgatc gtcagcgcgg tgccgccggt
       61 gccgcccgtc acggtgccga tgatgtcgga gccgtacttg acgttggtgc cgtcgatgct
      121 gatctggccg gcaccggtgc cttcgttgcg gatcgccaga acgtcctcgg cattatcgga
      181 accggcggtg aacgtgaccg tcaggctgcc gccgcggaag tcgttggtat ccacgtcggc
      241 gaccgccgcc agggtgccct ggtcgatcac caccgcgccg gcgccctcgg cataggccag
      301 gttgtcggcc gccaggttgt ccagcgtcgg cgcgtcgttg accggggtga cggtgatggc
      361 gaaggtctgc cccgtgcggg ttccgacgcc gtccgagatc gagtaggtcg cgctgtcgga
      421 cgtcgtctcg ctgccgtcat gggtgtaggt gatgatgccg ccgtcgatgt cggcctgggt
      481 gaaggtgccg ttaagcccga tggcgacgcc gctcttgtac aaggtgccct tggtcggcag
      541 cgtcgtgacg gtgtagacca gcgccgcgcc ggtggccgtc ccctcgggat cggtcgcacc
      601 cagcatggtg ttgtcgaggg tcaaggtcgc gccctcggcc acggtgccgg cgtggttgtc
      661 cacggtgggc aactggttga ccaccaagcc gcgcgtggcg gcgatgctgc tgccggcggc
      721 gctgtcgacg accgtgaagg tcacggtgtg gccggccgtc gtcggcgtgc cggcggcgtt
      781 gtcgaaggtc agcccgcgca ggatggtctg gtaggtcgcg accgtggccg agccggtcag
      841 ggtcagcgtg ccgctggcag tgtcgtaggc ataggtgacg cccgccccgt ccgccgccgc
      901 ctgggcggcc gtagtgaggg ccaggttctc gtcggtgccg tcggggcggc cggtcaggac
      961 cgccgtggca cccgagagat tcgtgctgtc ggcgtcggcc agcgtcagcc cggcatcgac
     1021 caccacggcg ccctgccccg gcacccagcc ggcgttgccg ccggtggcgg tgacgacggg
     1081 cacgtcgttg acggcggtga tgtccaccgt ggtgcccgtc gaggtcagcg tgttggaatt
     1141 gccggcgccg tcgttgaccg taatcgaaat attgcggccg gtgtcggcgc cataggcggt
     1201 cgggttgtcg ctggtggaag tgaaggtcac cgagcggatc gccgcctgcc actgcgccag
     1261 ggtcgcggtg ctgcccgccg aggtcagggt cagcacgccg gtggcggcgt tgtagctcgc
     1321 cgcgacgttg cccatggtcg ccgggttgtt ggtgaacgac agggtgtcgc ccgcaacgaa
     1381 gtcggtgacg gtcagggtcg ccgacgccag ggtctggttg tcgacgtcgc tgattgcgac
     1441 cgcaccggcg atcgccgcgc cggcgccgcc ctcggtatag gccgcgccct cggtcggggt
     1501 cgcgagcacc gagacgtcgt tgacgccatt gaccgtcagg gtcgcggtgg cggtggcggt
     1561 ctgggcgccg cccgagccgg tgtagccgcc gtcgctgaag gtcaccgtca tggtgcgggt
     1621 accggtggcg tcgtaggcgg tgggattgtc gtcggtggtc cagaacacca cctgccggcc
     1681 gaccgcctgc accgccgccg cgtcggccgc ggcgttgaag gtgatctgca ggtcatgcag
     1741 accctggccg gaatccacat agccggcggt cgccacggtc acgccgttgt aggtcaccgt
     1801 gccgggcgtg ccatacgtgt agacgacgtt gttgccgttg gtgatcgaca ggtactcgtt
     1861 ggacagatag gtgttctgct tgatcgtcag caccgccccg tcatacgagc cgccgttgtc
     1921 gatgtcggac gtggtgaagc cgctcatcac ataggccgaa cccgcctgtt cggtggccgc
     1981 gaaattggac acgccgccca cggtcggggc gtcgttgacg gcgctgacgg tgtaggtgac
     2041 cgtgtcggtg tccgtcacgg tgccgtcgct ggtggccatg gtcagggtga cggcgccgct
     2101 ggcgttggcc gcgccctgga aggtcacggt gcccagcgcg gcgttgacct gggcggcggt
     2161 gccctggatc tgcacgctgc tgccgccgtt gccggtgatg gtggcgccac cgccggtcac
     2221 caccgagatg gtgcccgccg ccaccgacag ggtggtggtg aggttgtcgc catccacatc
     2281 ggcgacgctg tagccgcccg tcacggtgat cggcgagtcc tcgttgccga cctggccgcc
     2341 cgggacggtg ttgaccggcg cgtcgttgac ggcgttgacc gtgatggtcg cggtggacgc
     2401 cgtcccaagg ccggtgcctg ccgcatcgcg cgcacccgcc acctggaagc tgccggcgct
     2461 ggtcgaattg gccgaaggcg tgaacttcag ccccgcctgc gcctcggcat aggtgatgaa
     2521 gtcgttgttg ctgatctggg tggagccgtc gttcttgtac agcgtgccgc cggtgatgcc
     2581 ggtgatcttg aagtgggtga tgtcggtggt gtcgacggca ttgcggccga tgaacagccc
     2641 gctggagctt tgggtgtcct cgttggtggt cgcgttggtg acggtcggcg cgtcggccac
     2701 cgaggtcacc gtgacggtcg aggtcgcgct gccggcgctg aggccggcgc cgccggcgct
     2761 ggtcgcgccc tggacgttaa acgaaccgtt gctggtagaa ttcgcgctag gcgtgaactt
     2821 caggccggct gcgccctggg cgtaggtgat gaaagcgccg tcgctgacct gggtgacgcc
     2881 gtcggccaga tacagcgtgc cgccggtgat gctggtgatc ttgaagtggg tgacctcggt
     2941 gctgtcggct gcgttgcggc ccagcgtgat gaggccgctc tgggtgtcct cggcggtggt
     3001 gacgttggtc gcggtcggcg tgtcggcgat acccgtcacg ttgatcgtca ccgtgtcggt
     3061 gtcggtggcg gtgccgtcgc tggtcgtcat ggtcagcgtg gcatagccgg tgccgttggc
     3121 atcggccggc ggggtgtagg tgacggtggc cagcgcggcg ttcacctgcg cggcggtgcc
     3181 gacgatctgc accgaattgg tgccgttggt gctgatggtg ccgccgccgc cggtggcgac
     3241 cgaaatggtg cccttgccgc caggcacgga cagggtggtg gtgatggtgt tgccggcatc
     3301 ggggtcggtc accgagaacg cgctggtcat cgtcagcgtg ccgtcttcgc tgaccgtctg
     3361 cgcccccggc acggtgttgg tgggggcggt gttgcttgac gtgaccgtcg ccaccaggtt
     3421 gtcgatggaa gcgtcgccgt ccgcggcggt aaccttaagc cacgagatgt cggtccagaa
     3481 tgcgccactg aacgtcagcg ggttgctggc ctcaagcgtg agaccggttt tcgtctcagt
     3541 acccctgttt gatgtgaact caatcgaggt aagaaggttt gtgaatacac tcagacttgt
     3601 caccgtgaac gtcgagccct cgaagctcag ggtaaggaac ccctccgacc aatgcgaagc
     3661 aacaccgtct gcatttaata taggcagact gctcgtgcca gccgcaacca aagccacgcc
     3721 atcaactgta tacttaatcg tatgatcatc aacattcgac gacacaccat cgtcaaacgt
     3781 aatattcacg ttgacgcccg gcagcacccc atcgtattcc gcaagccggt cggacgccgc
     3841 gaagagttct gtttcgatcg ctccggtcgc gtgctccaga tcccagtcgc cacctttggt
     3901 atcgctccca gtggcatcga cagacgcggc gacgtcggca ccaagccgtt gcgacagatc
     3961 ggcgaccaag gccacgcccg catcggactt ggcgacgttg cagccataga gcagaacgtc
     4021 ggcaccgtcg ttgaggccgg cattgatgcg ggccaaatcg tcggcatggg cgtccatgcc
     4081 ggcggcgttc agggtggcgc cgcccagcga aacgctgccg tccgtgccgt ggccgacgat
     4141 atggatggcg tcggccgggc cggtttcctc cagatagtcg gcgatgcggt cgaagccgtc
     4201 ggtgtccgaa ctgatcagca ccacctcggc gcccggcttc accatcccga ccacgctttg
     4261 gtagtcgggg accgattggt cgatgaacac gatctcgcgg cgggcatcgg cggcggcggg
     4321 gggcgacagc gacgccagag cgtcggccag gtcggcctcg ggagcgtcgg cggcgggttc
     4381 gggcgccggg gcgggttcgg gcgccggttg cgccgcctcg gcgatggtgg cggcggcggc
     4441 gccgtcgaac atcatgcgcg gttccagggc gaagcccagc ggcgacacgt gcgccttcag
     4501 gtcctggcgg tgatccttgc ggccgcgatt gttgcggacc agcgcgagaa tgctgcgatc
     4561 aagacgaccc atcgttaaga acccctttgt ccggcatccg gcgcccaccg cccgtgggac
     4621 ggatgccatg catccttcaa aggttgcgcg gcaacacagc gtcacctccc ccgaggtgac
     4681 acccatgtcc gccgcactcc ccaaaccggc ctacagtaaa accctgacgg cccggctgta
     4741 acttggatga gattaacacg cggaaggcgc gttttccacc ccccgggcgt caaggtcaca
     4801 atttaacaca accatcgcag cgtagggcac gccccaccgt tacaatcggg atagaacttt
     4861 gtgttgaaac ggaagcttca ttgggcaaat ctagcccatg gcgagttcca ccgccggcaa
     4921 aggcaaccgt gacgggtcgc ccttgcaccc agctaacaga ggggggagta tttatggatc
     4981 ctttcttgag tgaaatccgg ttgttcacct acgatttccc gatgaccgga tgggccaatt
     5041 gcgacggcac cctgttgccg gtggcgcaga accaggcgct gttcgtcctg atcagcaaca
     5101 ccttcggcgg caacggcacc accaatttcg ccctgcccga catgcgcggc cgcctgggca
     5161 tctgccaggg cgtgctgccg aacaccacca gcgtgtacgt gcgcggccag accggtggca
     5221 ccgaagcggt gcaactgacc gccagccagg tgccgagcca caatcaccag atgtacgcgt
     5281 cggccgacac cacgtcgctg gccaccacca actcgaactg ttacctgggc aacgcggcgc
     5341 aggctccggc cgatcccaat gcgcccaaca acctgtacac caccgaatac gtgccggtca
     5401 ccctgcgggc cgacgcggtc gcccagaccg gcggcaacgt gggccacaac aactgcatgc
     5461 cgtcgatcgg gctgaagttc tgcatcgcca ccctcggcat cttcccgtcc cgcaactgat
     5521 ccggcaggag aaacgacaat ggacgcttac attggcgaaa tccgcctctt tgccggcggt
     5581 tacaaccccg agaactgggc gctgtgcgac ggccggcaga tgaccatcag ccagaaccag
     5641 gtgctgttca gcctgatcgg cacgacgtat ggcggcaacg gcacgaccta tttcaatctg
     5701 cccgatttgc gcggccgcgc cccggtgggc atcggccagg gcaccggcct gaccatgcgc
     5761 aacctgggca accagtgggg cgccgaaaac gtgaccctgg acagcagcaa cctgccgccg
     5821 cacacccacc ccttcacggt cagcaccggc gccgccacca acatcgcccc caacggcgcc
     5881 ctgttgggtg cggcgaccac caccatcagc gggaccaatt ataacgttcc ctatttcgac
     5941 gatggcgtga gtccggtggt gacgccggtc cagatgaact ctggttcggt gagcagcgcg
     6001 ggctattccc aggcacacac caatcagcag ccctacatcg tcatcaacta catcatctgc
     6061 cttgtgggca cctatccgca gcgtccgtaa ggagggggga aacatggatc cgtttaccgg
     6121 cgaaatccgc atgatggcca acacctacgc cccgatggat tgggcgaact gtgatggcac
     6181 caccttgtac atccagcagc aggccatgct gtttgcggtc atcggcaacc gatatggcgg
     6241 cgatggcgtg aacaacttca agctgcccaa cctgcagggc cgcaccccca tcggcatggg
     6301 ccagggcccg ggcctgccga attatgccgt cggcgccacc ggcggcttcg aaaccgtggc
     6361 gatcaactcc ggccagatgc cggcgcacaa ccacaacgtc aacgtgttct ccagccccgg
     6421 tgacaaggcc ccggggaaca cgaccttgct ggcacgcggc tttgtgtcca cggtgccacc
     6481 cacaaatcgg tatcgcaagt tctacgacac cgcgatggcc ggtccgcaga tgctggacaa
     6541 ccgcaccatc ggcgcggcgt gcggcaatca ggtcggcggc gcgaacgtgc acgagaaccg
     6601 ccagccctat ctggtgctga actactacat atgcatgtac ggcgaattcc cggtgaaggc
     6661 gcagtgatgc cccgggggcc ggttcgccgg cccccacttt tttggttcat ccgccccctc
     6721 atcgtcatcc ccgcgaaggc ggggatccat ggaggccgcg aaaatgtcgg tgggaccatg
     6781 ggttgaggcg aagcctgacg gacccatggc cccccgcctt cgcgggggtg acgagtctgg
     6841 tgtcgaattc cgcgatgaac tatttttcca accccataga tccacggagc ccgcgatgcc
     6901 acccaagggt gtgaccctgc gccccatcac cgacgcagat ctgccgatgc tgcgcgacct
     6961 gtacgcctcg acccgggcat gggaaatgtc ccattccggc tggccgatcg aacagcaaca
     7021 agaatttttg accaatcaat tctcgtacca gcaccagtcc tatacgacaa actaccctgg
     7081 cgcgactttg gatgtggtcg agcgcgatgg tgaaagcgtg ggccggctgt acgttcaccg
     7141 tacaagcgaa gaactgcgca tcatcgacat ctgcttcttt ccgcaatatt gcggccaggg
     7201 catgggcggc gcgctgttga cggaattgct gtccgaggcc gacgcgctgg gcgttccggc
     7261 caccatccat gtcgagaagt tcaatctggg cgccaagcgg ctgtatcagc ggctgggctt
     7321 ttccctgaag gaagaccgcg gcgtctatga attgctggcc gccggtcaag gcgccttgcg
     7381 gggcgccgcc gagtgatggc gtccgggggc ggctggcgcc cccggacccg gcccgtcagt
     7441 tgaagacggc ctggtagacc acggtcgaag cgtcgccgcc gggcatttcg gtgaccggca
     7501 ccaggaagat ctcggccgtg ccgcactggg cgttgctgac ggtgtaggtg ccctggggca
     7561 ggtgcacgtc ttccgggccc ttgaacttca gggtgaacgg ctcggcgcgg cagccggcgg
     7621 gcaccacctt gggagccggc agcgcctggg cgtcggccag ggtgaaggtg tactcgttgc
     7681 cgaacgcggt aacggtgaac tcggcgccct cgtacgggtc gaaagcggcg caggtcacgg
     7741 acttcaaaca aatatcagcc atattccccc ctcatgaaaa aaatcccagc gggccgaggc
     7801 tgcccgcgac gccattattt gtagcgtctt ttttcgccag gggcaatctt ggcgggacac
     7861 cttaagcccc atttcacgac atcggattgg ccggcggcgg cggatcgggc ggcagcggga
     7921 tgaactcgcg atcgtccagg tcgggcagct tcatccggcc ggcgcgccag tccgccttgg
     7981 cctgctcgat gcggtcgcgc gacgacgaca cgaaattcca ctcgatgaag cgctggccca
     8041 gcggcgcgcc gccgatcgcc acc
//
LOCUS       DATIKR010000261         2019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_52187, whole genome shotgun sequence.
ACCESSION   DATIKR010000261 DATIKR010000000
VERSION     DATIKR010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52187"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..105
                     /locus_tag="VLL76_04015"
     CDS             <1..105
                     /locus_tag="VLL76_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HSV28693.1"
                     /translation="RPTKPTKGSQQRRLEGKAKRGVVKSMRRTRPGMD"
     gene            complement(139..885)
                     /locus_tag="VLL76_04020"
     CDS             complement(139..885)
                     /locus_tag="VLL76_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV28694.1"
                     /translation="MPPLDFDDHRSVDREHHDSPCRNCDVVREIAFCADLGGEEMRRL
                     AAVRCHAHLPASFAVFREGDPADHLYSISSGAVKLYKLLSDGRRQIIGFLFSGDMFGL
                     GVDGGYAYTAETVTPTQLCRFTHRKLDGLLQEVPRLERKMYAMAVKDLVAAQEQMLLL
                     GRKTAKEKVATFLLKLSRRAETLGQPVSSIALPMSRADIADYLGLTIETVSRTFTQLK
                     REGVIGLPASGHVVVMDAAGLKDLAEGSAA"
     gene            complement(913..1080)
                     /gene="ccoS"
                     /locus_tag="VLL76_04025"
     CDS             complement(913..1080)
                     /gene="ccoS"
                     /locus_tag="VLL76_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HSV28695.1"
                     /translation="MTNLLMLIPVALILGLMGLLAFLWALKSGQFDDLDGAAHRILFE
                     DEDDAQPRDKA"
     gene            complement(1077..>2019)
                     /locus_tag="VLL76_04030"
     CDS             complement(1077..>2019)
                     /locus_tag="VLL76_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSV28696.1"
                     /translation="VIASGRLLRQGILLKSATALERFAEADVVVFDKTGTLTVGKPEL
                     VRDGSWGDADLRAAASLALASRHPLARALANAAPGAVLADGVREEPGRGLVAGAIRLG
                     SRRWLGIADDAAAAGPELWLDQPGRASVRFAFADELRPDARKVVDALKARGLAVELLS
                     GDREATVRRVAAELGIERWHAAQTPADKVARLETLKAEGRKVLMVGDGLNDAPALASS
                     YVSMSPSSAVDVSQTAADVVFQGTRLAPVIETLSVAVTSRRLVTQNFGLALGYNLFTV
                     PMAVAGMVTPLIAAIAMSTSSLVVIGNALRLSRGRRA"
BASE COUNT          340 a          687 c          719 g          273 t
ORIGIN      
        1 cgcccgacca agccgaccaa gggctcgcag cagcgccggc tggagggcaa ggccaagcgc
       61 ggggtggtga aatccatgcg gcggaccagg ccggggatgg attaaggccg ccgacaaagc
      121 acccgatcgg gggcagggtc aggccgccga gccttcggcc agatccttga ggccggcggc
      181 gtccatcacc accacatggc ccgaggccgg caggccgatg acgccttcgc gcttcaactg
      241 ggtgaaggtg cggctgacgg tctcgatggt caggcccaga tagtcggcga tgtcggcgcg
      301 gctcatgggc agggcgatgg agctgaccgg ctggcccagg gtctcggcgc ggcgcgacag
      361 cttcagcagg aaggtcgcca ccttctcctt ggcggtcttg cggcccagca gcagcatctg
      421 ctcctgcgcc gccaccaggt ccttgacggc catggcgtac atcttgcgct cgagccgggg
      481 cacttcctgc agcagcccgt cgagcttgcg gtgggtgaag cggcagagct gggtgggcgt
      541 cacggtctcg gcggtatagg catagccgcc atcgacgccc aggccgaaca tgtcgcccga
      601 gaacaggaag ccgatgatct ggcggcggcc gtcgctcagc agcttgtaaa gcttcacggc
      661 gccggacgag atggaataca ggtggtcggc ggggtcgccc tcgcggaaaa cggcgaagga
      721 tgcgggcagg tgggcgtggc agcgcacggc ggccagccgg cgcatctcct cgccgccgag
      781 atcggcgcag aaggcgatct cgcgcaccac gtcgcaattg cggcagggcg aatcgtgatg
      841 ctcacggtca accgaccggt ggtcgtcgaa gtccaggggc ggcatcaggt tcaccttccc
      901 catcccctcc ggtcaggcct tgtcgcgggg ctgggcgtcg tcctcgtcct cgaacaggat
      961 gcgatgggcg gcaccgtcca ggtcatcgaa ctgaccggat ttcagggccc acaggaaggc
     1021 cagcaatccc ataaggccca gaatcagggc caccgggatc agcatcagca aattggtcaa
     1081 gctcttctcc cgcgggacag acgcagggcg ttgccaatta ctaccagcga cgaggtggac
     1141 atggcaatcg cggcgatcag cggcgtcacc atgcccgcca ccgccatggg tacggtgaac
     1201 aggttgtagc ccagcgccaa gccgaaattc tgggtaacca gccggcggga ggtcaccgcg
     1261 accgaaagcg tttcgatcac cggcgccagc cgcgttccct ggaacaccac gtcggcggcg
     1321 gtctggctga cgtccaccgc cgaggacggc gacatcgaga cgtaggacga ggccaaagcg
     1381 ggggcgtcgt tgaggccatc gcccaccatc agcaccttgc ggccctcggc cttgagcgtt
     1441 tccagccgcg ccaccttgtc ggccggagtc tgggcggcgt gccaacgttc gatgcccaat
     1501 tcggcggcga cgcggcggac ggtggcctcg cgatcgcccg acagcagctc gaccgccagg
     1561 ccgcgcgcct tcagcgcgtc caccaccttg cgggcgtcgg ggcgcaattc gtcggcgaag
     1621 gcgaagcgga cggaggcgcg gcccggctgg tccagccaca attcgggacc ggcggcggcg
     1681 gcatcgtcgg cgatgcccag ccagcgccgg ctgcccagac ggatggcgcc ggcaaccagg
     1741 cccctgcccg gctcctcgcg cacgccgtcg gccagcacgg cgccgggggc ggcgttggcc
     1801 agggcgcggg ccagcggatg gcgcgacgcc agcgccagcg aggcggcggc gcgcagatcg
     1861 gcgtcgcccc acgacccgtc gcgcaccagc tcgggcttgc ccacggtcag ggtgcccgtc
     1921 ttgtcgaaca ccaccacgtc ggcctcggcg aagcgttcca gcgcggtggc ggatttcagc
     1981 aggatgccct ggcgcagcag ccggcccgag gcgatcacc
//
LOCUS       DATIKR010000262         1926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_88884, whole genome shotgun sequence.
ACCESSION   DATIKR010000262 DATIKR010000000
VERSION     DATIKR010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88884"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..1733
                     /locus_tag="VLL76_04035"
     CDS             354..1733
                     /locus_tag="VLL76_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018901206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSV28697.1"
                     /translation="MMKLDVTLADSQEAPEPTIRRNSQSFESLLEKIEDRTAKVAVVG
                     LGNVGLSLARSVAATGFKVLGIDLDPDRVNSLNQGKSYLINIPEDQIKDLVAQGVLEA
                     SADFGRIAEADVALVCVPTPLDDNRQPNLAHVDVAARAIADNLSPGKFVMLESTSFPG
                     TTSEQVLPALEKSGLTAREDFFVAYSPMREDPGVAGRSLADIPKVVGADGAEAMQLAQ
                     AFYRQIVPKVVPVSSTETAEAVKLVENIYRAVNIALANELKIIFEAMGIDIWEVMDAA
                     ATKPFGFQPFYPGPGLGGHCIPVDPSYLTFKARQYGLQTQFIELACRVNDAMPAWVVD
                     RLAQAMELRGKPLVGAKVMVIGVAYKKNVEDVRESPALKMLRLLADRGAVIGYYDPHV
                     PSLAKATDDPQLAPLTSTPLGGLDAAVICTDHDAIDYDHVLATAALVVDTRNVYGRRG
                     IADARIVKA"
     gene            1741..>1926
                     /locus_tag="VLL76_04040"
     CDS             1741..>1926
                     /locus_tag="VLL76_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28698.1"
                     /translation="MEHTYGPSDLSVLMSTHAGERAEYLRRSLQSVFGQTMPAAECVL
                     VLDGPVGEDQHDVIRSFA"
BASE COUNT          341 a          647 c          626 g          312 t
ORIGIN      
        1 gtttgccctc ccggatgtca ggcaaacttc cgcgcaataa aagccgtcat gaagaggcgc
       61 cggtgaagga agaagggcta atccgcaacg cctgaggcgc catcggatgg cgaaagacgc
      121 gtccgccacc ccttccgagg cggcgtcccg cgcccgcttg tgcggcgcaa tatcaggctt
      181 ttccggtttg cggcgagggc cgggctaatg ccgttgggcg ggccggtccg cgctttgtcg
      241 cgctgcgcaa gcgcgaaagc atccgcccct attgctgatt gcggctcccc atcctccgat
      301 ccaactcagg cacctgggta aacccgggtt ccgagagaaa ggaatgccgc accatgatga
      361 agctggatgt aaccctggcg gacagccagg aggcgcccga gcccaccata cggcgcaatt
      421 cgcaatcttt cgaaagcctg ttggagaaga tcgaggaccg aacggccaag gtcgccgtgg
      481 tggggctggg caatgtcggg ctgtcgctgg cgcgcagcgt ggcggcgacc ggcttcaagg
      541 tgctgggcat cgaccttgat cccgaccggg tcaacagcct gaaccaaggc aagtcgtacc
      601 tgatcaacat ccccgaggac cagatcaagg atctggtggc gcagggcgtg ctggaggcct
      661 cggccgattt cggccgcatc gccgaggccg acgtcgccct ggtctgcgtg ccgacgccgc
      721 tcgacgacaa tcgccagccc aatttggccc atgtggacgt cgccgcccgc gccatcgccg
      781 acaacctcag ccccggcaag ttcgtcatgc tggaatccac cagctttccc ggcacgacct
      841 cggaacaggt gctgccggcg ctggaaaaga gcggcttgac cgcgcgcgag gacttcttcg
      901 tcgcctattc ccccatgcgc gaggaccccg gcgtcgccgg ccgctcgctg gccgacatcc
      961 ccaaggtggt gggcgccgac ggggccgagg cgatgcagtt ggcccaggcg ttctatcgcc
     1021 agatcgtgcc caaggtggtg ccggtgtcgt ccaccgagac cgccgaggcg gtcaagctgg
     1081 tcgagaacat ctaccgtgcc gtcaacatcg ccctggccaa cgagctgaag atcatcttcg
     1141 aggccatggg catcgacatc tgggaggtga tggacgccgc cgccaccaag ccgttcggtt
     1201 tccagccctt ctatcccggc cctggcctgg gcggccactg catcccggtc gatcccagct
     1261 atctgacctt caaggcgcgg caatacgggc tgcagaccca attcatcgaa ctggcctgcc
     1321 gggtcaacga tgccatgccc gcctgggtgg tcgatcgctt ggcccaggcc atggagttgc
     1381 gcggcaagcc cttggtcggc gccaaagtca tggtgatcgg cgttgcctat aagaagaacg
     1441 tcgaagacgt gcgcgaaagc ccggccctga agatgctgcg gctgctggcg gatcgcggcg
     1501 ccgtgatcgg ctattacgac ccccatgtgc ccagcctggc gaaggcgacc gacgaccccc
     1561 aactggcgcc gctgacctcg acgcccctgg ggggattgga cgcggcggtg atctgcaccg
     1621 accacgacgc gatcgattac gaccacgtgc tggcgacggc ggcgctggtg gtggacaccc
     1681 gcaacgtcta tggccggcgc ggcatcgccg acgcccgcat cgtcaaggcg tgagcccgcc
     1741 atggagcaca catacgggcc ttccgacctc agcgtcctga tgtccaccca tgccggcgag
     1801 cgggcggaat acctgcgccg gtcgctgcaa agcgtgttcg gccagaccat gccggcggcg
     1861 gaatgcgtcc tggtcctcga cgggccggtg ggcgaggacc agcatgacgt catccgctcg
     1921 ttcgcc
//
LOCUS       DATIKR010000263         1957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_137399, whole genome shotgun sequence.
ACCESSION   DATIKR010000263 DATIKR010000000
VERSION     DATIKR010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137399"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..673)
                     /locus_tag="VLL76_04045"
     CDS             complement(218..673)
                     /locus_tag="VLL76_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28699.1"
                     /translation="MQSFTDNAGRTWKVHLTIDAIRRVKAELAVDLLAIDQGDPPLLT
                     RLGTDVALVVDVVFAIVRPQADEAGITDEQFGRSLGGEAIIAAHDALLEELVDFFRSL
                     RRVHLATAIAKQQAMLQAAIVALEAKIAQADVALAAIETAAISGGQSTS"
     gene            complement(724..1191)
                     /locus_tag="VLL76_04050"
     CDS             complement(724..1191)
                     /locus_tag="VLL76_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28700.1"
                     /translation="MAFKLGKDCKFYFISAPLAAVATGSEQWVLTGNVRDVAVDRSTG
                     TADMTTRGNAGYRQRAATLKEATITFEMLKDGADAAFQAFQAAYDTSSEIAVAAMDGL
                     MSPGAGNSSSGLTGNFTVSDFSESQELEESVKISVTLQASTHTNYLTVTGGGS"
     gene            complement(1439..1861)
                     /locus_tag="VLL76_04055"
     CDS             complement(1439..1861)
                     /locus_tag="VLL76_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28701.1"
                     /translation="MIGLDVKRMFFDRQAVIVQADAATRKVLSKFGAFVRRTARGSIR
                     RRKKTSEPGAPPSGHTGLLKRLIFFAYDPDRRSVVIGPAPLRAKVEAPPLLEYGGTAR
                     RKDRRGRTVTARYRARPFMGPALAKELPGLPPLWRESI"
BASE COUNT          315 a          668 c          638 g          336 t
ORIGIN      
        1 ttggccttgg taatcacgat atcctttcgc gcacgcgcga agggatcgaa atccgacgga
       61 cgatacggac ggcctctgcg cttatgatct cggtgcggct cagctagcag cgccataacc
      121 tgagacgttc tagcccattc agaacgctcg cggccctaag ccatccacgc caactcgcgc
      181 aggctgtacg gtccaggagc aatcccaaca attccggcta actcgtagat tgtccgccag
      241 atattgcagc cgtctcgatg gccgccagcg ctacgtcggc ctgagcaatc ttggcttcca
      301 gcgccacaat cgccgcctgc agcatcgcct gctgcttggc gatcgccgtc gccaggtgca
      361 cccgccgcag gctccggaaa aaatccacca gctcctccag cagggcgtcg tgggcggcga
      421 tgatcgcctc gccgcccagg gaccggccga actgttcgtc ggtgatgccg gcctcatcgg
      481 cctggggcct gacgatggcg aagaccacgt cgaccacgag cgccacgtcc gtgccgagtc
      541 gtgtcagcag gggcggatcg ccctggtcga tggccagcag gtccacggcc agttcggcct
      601 tgacccgccg gatcgcgtcg atcgtcaggt ggaccttcca cgtgcggccg gcgttgtcgg
      661 taaagctctg catcgatcca cctccaaggt catgtcgtca ttgaggtccg cccacggtcc
      721 ggcctagctc ccgccgccgg tgacggtcag gtaattggtg tgcgtgctgg cctgcagggt
      781 gacgctgatc ttgacagact cttcgagctc ctggctctcg gagaagtccg agacggtgaa
      841 gttgccggtc aggccgctcg aggaattgcc ggcgccgggg ctcatcaggc catccatggc
      901 cgccacggcg atctcgctgg aggtgtcata ggcggcctgg aaggcctgga aggccgcatc
      961 ggcaccgtcc ttgagcatct cgaaggtgat cgtggcctcc ttgagcgtgg ccgcccgctg
     1021 gcggtagccg gcgttgccgc gggtggtcat gtcggccgtg ccggtggaac ggtcgaccgc
     1081 cacatcgcgg acgttgccgg tcagcaccca ctgttccgag ccggtggcca ccgccgccag
     1141 cggggcgctg atgaagtaga acttgcagtc ctttcccaac ttgaatgcca tatcgattcc
     1201 ctttctggct ccgtgcacat gcaaccaacg ccaccggccg ccaaacgcac gcaatcgcac
     1261 gataggcgca cggatcacac gcggatgaca cccaccgtgc aatcatccct gtggccggcg
     1321 acccgatgtc cacaggagca tcagctgcct gtggcatgca ctaaacgtcc gcagcagcag
     1381 cagcacggac tcggatgcgt gatacgcagt gacccggcgt ccacagcatg cctgatcatc
     1441 agatcgactc gcgccacagc ggcggcaggc cgggcagttc cttggccagg gccggaccca
     1501 tgaagggtcg ggcccggtag cgggcggtga cggtccggcc gcggcggtcc ttgcgccggg
     1561 cggtgccgcc gtactccagc agcggcgggg cttcgacctt ggcccgcagc ggcgccgggc
     1621 cgatcaccac cgaccggcgg tccgggtcgt aggcgaagaa gatcagccgc ttgagcagcc
     1681 cggtatggcc gctgggcggg gcgcccggct cggaggtctt cttgcggcgg cggatgctgc
     1741 cgcgggcggt ccgccgcacg aaggcaccga acttgctgag gaccttccgc gtggccgcat
     1801 cggcctggac gattaccgcc tgtcggtcga agaacatccg cttgacgtcc aggccgatca
     1861 tggcgccttc tgtccgggcc ggtcatcctg tgccggccgg tccttggccg gcgccaggcc
     1921 cagccgctgg atctccgcct ccagttcctg gcgggtg
//
LOCUS       DATIKR010000264         2349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_52223, whole genome shotgun sequence.
ACCESSION   DATIKR010000264 DATIKR010000000
VERSION     DATIKR010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52223"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VLL76_04060"
     CDS             <1..835
                     /locus_tag="VLL76_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSV28702.1"
                     /translation="NGLSNSEDPLKPEPPMGRVIELRKTMRECGVPDRTPIFMAGGVW
                     ALAEWEDWIGNPELGAVAFQFGTRPLLTQESPISDAWKKRLVTLKPGDVLLHRFSPTG
                     FYSSAVKNGFIQELVDRSHRQIAYSTEAVGEHEAELPIGARKRIVWVTPHDKNLALGW
                     MAEGFTEALRTPDSTLVFVDPVKAEEIRKDQVDCMGCLSQCMFSNWAQNEAGTTGKKA
                     DPRSFCIQKTLQNIGHGGDVENELMFAGHNAYRFANDPYYANGFVPTVKQLVERIASG
                     A"
     gene            complement(899..1270)
                     /locus_tag="VLL76_04065"
     CDS             complement(899..1270)
                     /locus_tag="VLL76_04065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28703.1"
                     /translation="MMLTRRTLLALAACTLAAGRAQAAEEKKEIMQAVAVAIEYWDRD
                     GLFHLVNADLLIVLDKEGMKVAKPAVEKITKTLSSLPWEEFNRGNPAVTIKNIALDST
                     RTDPVAGKHVSDVLISKLMIR"
     gene            complement(1267..1662)
                     /locus_tag="VLL76_04070"
     CDS             complement(1267..1662)
                     /locus_tag="VLL76_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV28704.1"
                     /translation="MTDAANNSRRRVFPAGTLIFEEGDQGAEAYVVEYGRVTVFKTVK
                     NQRVPLGEIQPGGIFGEMALIDDQPRMASAVAEAETACVVIAKERLSEQLEKAPKGVR
                     VIVGALLGNIRLMGTELAEARVILGGDAP"
     gene            complement(1659..>2349)
                     /locus_tag="VLL76_04075"
     CDS             complement(1659..>2349)
                     /locus_tag="VLL76_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013819410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSV28705.1"
                     /translation="AEFITSHFPNVHAECLKFGIDITRQPIPVVPAAHFTCGGVLTDL
                     KGRTDVENLYAVGEVACTGLHGANRLASNSLLECLVFGAAAAEDIVARLDGLVPPPEL
                     RPWDESWVTDSDEEVVVAHNWDELRRFMWDYVGIVRSTKRLERAKHRVKLLLDEIAEY
                     YGSFRVTNDLLELRNLAMVADLIVRSALIRRESRGLHYTIDFPAPDTIAPPQNTILVP
                     KNFSARRSVAP"
BASE COUNT          383 a          791 c          793 g          382 t
ORIGIN      
        1 taacggcctg tccaattccg aggacccgct gaagcccgag ccgcccatgg gccgcgtcat
       61 cgagctgcgc aagaccatgc gcgaatgcgg cgttcccgac cgcaccccga tcttcatggc
      121 cggcggcgtg tgggcgctgg cggaatggga agactggatc ggcaaccccg aactcggcgc
      181 cgtcgccttc cagttcggca cccgcccgct gctgacccag gaaagcccga tctcggatgc
      241 ctggaagaag cgcctggtga cgctgaagcc cggcgacgtg ctgctgcacc gcttcagccc
      301 gaccggcttc tattcgtcgg cggtcaagaa cggcttcatc caggagctgg tagaccgcag
      361 ccaccgccag atcgcctatt cgacggaagc cgtgggcgag cacgaggccg agctgcccat
      421 cggcgcccgc aagcgcatcg tctgggtcac cccgcacgac aagaacctgg cgctgggctg
      481 gatggccgag ggcttcaccg aggcgctgcg cacccccgac agcaccctgg tgttcgtcga
      541 tcccgtcaag gccgaggaaa tccgcaagga tcaggtcgat tgcatgggct gcctgtcgca
      601 gtgcatgttc tcgaactggg cccagaacga ggccggcacc accggcaaga aggccgaccc
      661 gcgcagcttc tgcatccaga agaccctgca gaacatcggc catggcggcg acgtggaaaa
      721 cgagctgatg ttcgccggcc acaacgccta tcgcttcgcc aacgacccct attacgccaa
      781 cggcttcgtg ccgaccgtca agcaactggt cgagcgcatc gccagcggcg cctagcagcc
      841 ccctgcgcgt catacccggc cgggcatgac gcgcaggaca ttcgcaggct gaagcccgtc
      901 agcggatcat cagcttggag atcagcacgt ccgagacgtg cttgcccgcc accgggtcgg
      961 tgcgggtgct gtccagcgcg atgttcttga tggtcaccgc cggattgccg cggttgaact
     1021 cttcccacgg cagcgacgac agggtcttgg tgatcttctc caccgccggc tttgcgacct
     1081 tcatgccctc cttgtcgagc acgatcagca ggtcggcgtt gacgaggtgg aacaggccgt
     1141 cgcggtccca atactcgatc gccaccgcca ccgcctgcat gatctccttc ttctcctcgg
     1201 cggcttgggc gcggccggcg gcgagggtgc aggcggcgag ggccagcagg gtgcggcggg
     1261 tcagcatcac ggcgcgtcgc cgcccaggat gacgcgggcc tcggccagct cggtgcccat
     1321 cagccggatg ttgccgagca gggcgccgac gatgacgcgc acgcccttgg gcgccttctc
     1381 cagttgctcg gacagccgtt ccttggcgat gacgacgcag gccgtttcgg cctcggccac
     1441 cgccgacgcc atgcgcggct ggtcgtcgat cagcgccatc tcgccgaaga tgccgccggg
     1501 ctggatctcg cccaatggga cgcgctggtt cttgacggtc ttgaacacgg tgacgcggcc
     1561 gtattccacc acataggcct cggcgccctg gtcgccttcc tcgaagatca gggtgccggc
     1621 cgggaacacg cggcggcggg agttgttggc ggcgtcggtc acggcgcgac gctccggcgg
     1681 gccgagaagt tcttcggcac caggatggtg ttctgcggcg gcgcgatggt gtcgggggcg
     1741 gggaagtcga tggtgtaatg caggccccgg ctctcgcgcc ggatcagcgc cgagcgcacg
     1801 atcaggtcgg cgaccatggc gaggttgcgc agttccagca ggtcgttggt gacgcggaag
     1861 ctgccgtaat attcggcgat ctcgtccagc agcagcttga cgcggtgctt ggcgcgctcc
     1921 agccgcttgg tcgagcgcac gatgccgaca tagtcccaca tgaagcggcg cagctcgtcc
     1981 caattgtggg ccacgaccac ttcctcgtcg gaatcggtga cccagctttc gtcccacggc
     2041 cgcagctcgg gcggcggcac caggccgtcg aggcgggcga cgatgtcctc ggcggcggcg
     2101 gcgccgaaca ccaggcattc cagcagcgag ttggacgcca ggcggttggc gccgtgcagg
     2161 ccggtgcagg cgacctcgcc cacggcatac aggttctcga cgtcggtgcg gcccttgagg
     2221 tcggtcagca cgccgccgca ggtgaaatgc gccgccggca ccaccgggat cggctgccgg
     2281 gtgatgtcga tgccgaattt caaacattcg gcgtggacgt tggggaaatg gctggtgatg
     2341 aactcggcc
//
LOCUS       DATIKR010000265         1708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_100800, whole genome shotgun sequence.
ACCESSION   DATIKR010000265 DATIKR010000000
VERSION     DATIKR010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100800"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VLL76_04080"
     CDS             complement(<1..267)
                     /locus_tag="VLL76_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HSV28706.1"
                     /translation="MCWSHVLPRLILFNKPYDVLTQFSDREGGRKTLKDFVPVPDIYP
                     AGRLDRDSEGLVVLTDDGPLIARIAQPRHKLPKVYWAQVEGVPTE"
     gene            281..1054
                     /locus_tag="VLL76_04085"
     CDS             281..1054
                     /locus_tag="VLL76_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSV28707.1"
                     /translation="MARPPLRHKPPHRPHHEETEKVAGLPAVKALFAHAPDRAERLFF
                     DDRLAAEAGPFCKLLAARHKPYRKVPTDELTKIAGSPLHGGILCVARPKPIPLFDVED
                     AKGWTTPLVILDGVGNPHNLGAIARTMAFFGLDRLVVSDHPGQALPSEAAFRVAEGGL
                     EWVQVYRAPKLPQVLKRLRAHYRVVGTALGAHRPLDAVLAKGDKPLAVVLGNEEEGLP
                     PATQAACDEVATIPGSGKVQSLNVAATAAILVHLLAAGR"
     gene            complement(1056..1181)
                     /locus_tag="VLL76_04090"
     CDS             complement(1056..1181)
                     /locus_tag="VLL76_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28708.1"
                     /translation="MDIELIAIASGVVFGGGLIVAKYVVGHLIAAKAAKEKDSGE"
     gene            1279..1596
                     /locus_tag="VLL76_04095"
     CDS             1279..1596
                     /locus_tag="VLL76_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSV28709.1"
                     /translation="MSQVRASHILLMYKGSMRSTATRSKEEALAQIQEMRDQVKAGAD
                     FGKLASEHSDCPSGQEGGDLGFFGRGQMVPEFETATFAMQPGDVSDVVETAFGYHIIQ
                     RTA"
BASE COUNT          286 a          595 c          556 g          271 t
ORIGIN      
        1 ctcggtgggc acgccctcga cctgggccca atagaccttg ggcagcttgt ggcgcggctg
       61 cgcgatgcgg gcgatcagcg ggccgtcgtc ggtcagcacc accagccctt ccgaatcgcg
      121 gtccagccga ccggcgggat aaatatccgg gaccggaacg aagtccttca gcgtcttgcg
      181 cccgccctcg cggtcggaaa actgggtcag cacgtcatag ggcttgttga acaggatcag
      241 gcggggcaaa acatggctcc aacacaaagg ctggacttga atggcacgac ctccgctccg
      301 gcacaagccg ccgcaccgcc cgcatcacga ggaaaccgaa aaggtcgccg gcctgcccgc
      361 cgtcaaggcg ttgttcgccc atgcacccga tcgggccgag cgcctgttct tcgacgaccg
      421 cctggcggcc gaggccggcc ccttctgcaa gctgttggcg gcgcggcaca agccctaccg
      481 caaggtgccg accgacgagt tgaccaagat cgccggcagc ccgctgcatg gcggcattct
      541 gtgcgtcgcg cggcccaagc ccattccgct gttcgatgtc gaggacgcca agggctggac
      601 cacgccgctg gtgatcctgg acggcgtcgg caatccgcac aatctgggcg ccatcgcccg
      661 gaccatggcg ttcttcgggc tggaccggct ggtggtgtcg gaccatcccg gccaggcgct
      721 gccctcggaa gccgccttcc gggtcgccga gggcgggctg gaatgggtgc aggtctatcg
      781 cgcccccaag ttgccgcagg tgctgaagcg cctgcgcgcc cattaccgcg tggtcggcac
      841 cgccttgggc gcccaccgtc cgctggacgc ggtgctggcc aagggcgaca agccgctggc
      901 ggtggtgctg ggcaatgaag aggaagggtt gccgccggcg acccaggcgg cgtgcgacga
      961 ggtcgccacc atccccggct cgggcaaggt gcaatcgctg aacgtggccg ccacggcggc
     1021 catcctggtc cacctgctgg cggccgggcg ttaggctatt cgcccgaatc cttttccttc
     1081 gcggccttgg cggcgatcag gtggccgacc acgtatttgg cgacgataag gccgccgccg
     1141 aacaccacgc ccgaggcgat ggcgatcaat tcgatatcca tccgctgatc ctcacataac
     1201 cgttcacaag ctatagcatc gcgcccgcct gcccgctatg gtcgggcgca cgaaccaaca
     1261 gttttccgga gagagttcat gtcccaagtc cgcgcctcgc acatcctgct catgtacaag
     1321 ggttccatgc gctcgaccgc gacccgcagc aaggaagagg ccctggccca gatccaggaa
     1381 atgcgcgacc aggtcaaggc cggcgccgat ttcggcaagc tggccagcga gcattccgat
     1441 tgcccgtcgg gccaggaagg cggcgacctc ggcttcttcg gccgcggcca gatggtgccc
     1501 gagttcgaga ccgccacctt cgccatgcag ccgggcgacg tgtccgacgt ggtcgagacc
     1561 gcgttcggct atcacatcat ccagcgcacc gcatagcatg ccccgcgacg ccgccgacct
     1621 cgtgacggac tcacatgtcg gcgaacgctc cggcggcgtc gcgttctatt gcgcgcaatg
     1681 cggcgccttc atgacgcggg cgtcgctg
//
LOCUS       DATIKR010000266         3975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_28251, whole genome shotgun sequence.
ACCESSION   DATIKR010000266 DATIKR010000000
VERSION     DATIKR010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3975
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28251"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..1579
                     /locus_tag="VLL76_04100"
     CDS             242..1579
                     /locus_tag="VLL76_04100"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008422 - beta-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH1 family beta-glucosidase"
                     /protein_id="HSV28710.1"
                     /translation="MSSIYTFPKDFLWGASTSSYQIEGALDVDGRGPCIWDTYAAEGH
                     IEDGSNAAFACDHYHRYPEDVALMKDAGFKAYRFSIAWPRIQPTGTGPANSKGLDFYD
                     RLVDELLAAGIKPMACLYHWDLPQALEDKGGWQSRELTGPFAEYARIVSARLADRVKD
                     WMMFNEPNIVAVFGYGRKDQAPGKNLGDVGVLKAIHHQSLAQGAALRAIAAEHQGLTL
                     GTVLQLQPARAETDALPDLAAAAMWDSVWNRLALDGVLRGEIPPLLAERMKDIVKPGD
                     MEAIKYPVDVIGINYYSRMTMKHDPGKFLFNVNWGEPGADRYTCMGWPVQPDGLYDLL
                     CEFRDKYGNIPVYITENGAAYEDVVAPDGQVHDVERTQFIKEHIQSVARAHRDGCNVK
                     GYLAWSLLDNFEWSFGLSKRFGMIRVDYQTGQRTPKDSFKFFGSVAKSGQIEI"
     gene            complement(1791..3470)
                     /gene="ettA"
                     /locus_tag="VLL76_04105"
     CDS             complement(1791..3470)
                     /gene="ettA"
                     /locus_tag="VLL76_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HSV28711.1"
                     /translation="MAAYQYIYVMKDLKKAYPGGKEILKGLYLSFLPGAKIGVLGANG
                     AGKSTLLKIMAGIDKEYAGEAWAADGVKVGYLPQEPQLNPAKDVIGNVMEGVGETKAL
                     LDRFNEVSARFAEELTDDEMNDLIAEQAELQEKIDHLDAWDLERKVEIAMDALRCPPS
                     DWSVDKLSGGERRRVALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEEYSGTVVM
                     VTHDRYFLDNVTGWILELERGHGIPYEGNYTSWLEQKEKRLAQEEREETARQRAIRDE
                     LEWVRSSPKARQAKSKARINAFEDLVAKSQEKATGPAVISIPPGPRLGGKVIEAENVS
                     KAFGDNLLYENLNFKLPPGGIVGIIGPNGAGKTTLFRMITGQETPTSGTFTVGETVVL
                     GYVDQSRDSLDPNKTVFEEISDGQEEIDVGRRKINSRAYAGLFNFRGPDQQKKVGVLS
                     GGERNRVHLAKMLSRPANVILLDEPTNDLDVETLSALEDALAEFPGCAVVISHDRYFL
                     DRIATHILAFEGDSQVVWFEGNYQDYEADRKRRLGADADQPHRIKYKPLTR"
     gene            complement(3675..>3975)
                     /locus_tag="VLL76_04110"
     CDS             complement(3675..>3975)
                     /locus_tag="VLL76_04110"
                     /inference="COORDINATES: protein motif:HMM:NF021824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative nucleotidyltransferase substrate
                     binding domain-containing protein"
                     /protein_id="HSV28712.1"
                     /translation="VRTLALKHRVKATGTGDRLAELAAGGHMNEEEARGFRDSHDLMV
                     RLLVDQQVAAAKVGAALSNRIDPKRFRPHERRQLKQAFKNINALTWVMQNALSTV"
BASE COUNT          627 a         1319 c         1318 g          711 t
ORIGIN      
        1 cgggctgggc cgagcatccc ggaaccggct tccaccagcg tccgacggtg tgaccggcgg
       61 ccgtccgtgc ctgaaagatg cttcgctggc gctcagcatg acaggaaagg gtttgtcatc
      121 ctgagccgca ggcgaaggat ctttcagccg aggtgctcgc cgccagtgcc cgcccccttg
      181 aatccattcc catttggcgc atgatggtgg gcagaatcct tcttctgccg gagccgccgc
      241 catgtcctcg atctacacat tccccaagga cttcctgtgg ggcgcttcga cctcgagcta
      301 ccagatcgaa ggcgcgctcg acgtcgatgg ccgcggcccc tgcatctggg acacctatgc
      361 cgccgagggc cacatcgagg acggctcgaa cgccgccttc gcctgcgacc actatcaccg
      421 ctatcccgaa gacgtggcgc tgatgaagga cgccggcttc aaggcctatc gcttctcgat
      481 cgcgtggccg cgcatccagc ccaccggcac cggcccggcc aattccaagg gcctcgactt
      541 ctacgaccgg ctggtcgacg aattgctggc ggccggcatc aagccgatgg cctgcctgta
      601 ccactgggac ctgccgcagg ccctggagga caagggcggc tggcagagcc gcgagctgac
      661 cggccccttc gccgaatacg cccgcatcgt ctccgcccgc ctggccgacc gcgtcaagga
      721 ctggatgatg ttcaacgagc ccaacatcgt cgcggtgttc ggctatggcc gcaaggacca
      781 ggcgccgggc aagaacctgg gcgacgtcgg cgtgctgaag gcgattcacc accagagcct
      841 ggcccagggc gccgcgcttc gcgccatcgc cgccgagcac cagggcttga cgctgggcac
      901 cgtgctgcag ctccagcccg cccgcgccga gaccgacgcc ctgcccgacc tggccgccgc
      961 cgccatgtgg gattcggtgt ggaaccgcct ggcgcttgac ggcgtgctgc gcggcgagat
     1021 cccgccgctg ctggccgagc gcatgaagga catcgtcaag cccggcgaca tggaggcgat
     1081 caagtacccg gtcgacgtca tcggcatcaa ctactacagc cgcatgacca tgaagcacga
     1141 tccgggcaag ttcctgttca acgtcaactg gggcgagccg ggcgccgacc gctacacctg
     1201 catgggctgg ccggtgcagc cggacgggct ttacgacctg ctttgcgagt tccgcgacaa
     1261 gtacggcaac atccccgtct acatcaccga gaacggcgcc gcctatgaag acgtggtggc
     1321 gcccgacggc caggtccacg acgtcgagcg cacccagttc atcaaggagc acatccagtc
     1381 ggtcgcccgc gcccaccgcg acggctgcaa cgtcaagggc tacctggcct ggagcctgct
     1441 cgacaatttc gaatggagct tcggcctgtc caagcgcttc ggcatgatcc gcgtcgatta
     1501 ccagaccggc cagcgcaccc ccaaggacag cttcaagttc ttcggaagcg tcgcgaaaag
     1561 cggccagatc gagatctgac ttgctgcccc cgttcccgtc atcgccgggc ttgacccggc
     1621 gatccacgtg gtagccgaaa gttccgcttt aatatcagtg tcttaggcgg attccgcgtg
     1681 gatggccgtg tcaagcacgg ccatgacgat ggtgtagagc agcccctctc ccgcaagtgg
     1741 gcgagggatt cccaaaaaaa ggggcgccct tgcgaggcgc cccttggaag ctaccgcgtc
     1801 agcggcttgt acttgatgcg gtgcggctgg tcggcgtcgg cgcccaggcg gcgcttgcgg
     1861 tcggcctcgt agtcctggta gttgccctcg aaccacacga cctgggaatc gccctcgaag
     1921 gccaggatgt gggtggcgat gcggtccagg aagtagcgat cgtggctgat gaccacggcg
     1981 cagccgggga attcggccaa ggcgtcttcc agcgccgaca gggtttccac gtccagatcg
     2041 ttggtcggtt cgtcgagcag gatgacgttg gcggggcggc tcagcatctt ggcgaggtgg
     2101 acgcggttgc gctcgccgcc cgacagcacg ccgaccttct tctgctggtc ggggccacgg
     2161 aagttgaaca ggccggcata ggcgcgcgag ttgatcttgc ggcggccgac gtcgatctct
     2221 tcctggccgt ccgagatctc ctcgaacacc gtcttgttgg gatcgagcga atcgcggctc
     2281 tggtcgacgt aacccagcac caccgtctcg cccaccgtga aggtgcccga ggtcggggtt
     2341 tcctggccgg tgatcatgcg gaacagggtg gtcttgccgg cgccgttggg gccgatgatg
     2401 ccgacgatgc cgcccggcgg cagcttgaag ttcaggttct cgtacagcag gttgtcgccg
     2461 aacgccttgg acacgttctc ggcctcgatc accttgccgc ccaggcgcgg gcccggcgga
     2521 atgctgatga cggcggggcc ggtggccttt tcctggctct tcgcgaccag gtcctcgaac
     2581 gcgttgatac gggccttgct cttggcctga cgggccttgg gcgacgaccg cacccattcc
     2641 agctcgtcgc gaatggcgcg ctggcgggcg gtctcctcgc gctcttcctg ggccaggcgc
     2701 ttttccttct gctccagcca gctggtgtag ttgccctcgt aggggatgcc gtggccgcgc
     2761 tccagctcca ggatccagcc ggtgacgttg tcgaggaagt agcggtcgtg ggtgaccatc
     2821 accacggtgc cgctgtattc ctcgaggaag cgttcgagcc aggccaccga ttcggcgtcc
     2881 agatggttgg tgggctcgtc cagcagcagc atgtcggggt gggacagcag caggcggcac
     2941 agcgcgacgc ggcggcgctc gccgcccgac agcttgtcca ccgaccaatc gctgggcggg
     3001 cagcgcaggg cgtccatggc gatctcgacc ttgcgctcca ggtcccaggc gtccaggtgg
     3061 tcgatcttct cctgcagttc ggcctgttcg gcgatgagat cgttcatctc gtcgtcggtc
     3121 agctcctcgg cgaagcgggc cgagacctcg ttgaagcggt cgagcagcgc cttggtctcg
     3181 ccaacgcctt ccatgacgtt gccgatgacg tccttggccg ggttgagctg cggctcctgc
     3241 ggcaggtacc cgaccttgac gccgtcggcg gcccacgcct cgccggcata ttccttgtcg
     3301 atgcccgcca tgatcttgag cagggtcgac ttgccggcgc cgttggcgcc cagcacgccg
     3361 atcttggcgc cgggcaggaa cgacaggtag aggcccttga ggatctcctt gccgccggga
     3421 taggccttct tcaggtcctt catgacgtaa atatactgat aggcggccat tggtcctccg
     3481 ctggcgggcg tcttatgaaa aggggttagg gggttggtag accagcggcc cgcccccgtc
     3541 aagcacccgg acggacggac aaggacaccg ccgccccgtg gggagcggcg gtgcgaggtt
     3601 ggttcgtgga gggagacaag ggaaggtcct ctatggctgg catgtcggga cacgtccccg
     3661 cccgcgcaag ccccctatac cgttgagagg gcgttctgca tcacccaggt cagggcgttg
     3721 atgttcttga acgcctgctt gagctggcgg cgttcgtgcg gccggaagcg tttggggtcg
     3781 atgcggttgg acagggcggc gcccaccttg gcggcagcca cctgctggtc caccagcagg
     3841 cgcaccatca gatcgtggct gtcgcggaag ccgcgcgcct cctcctcgtt catgtggccg
     3901 ccggcggcca gctcggccag gcggtcgccg gtgccggtgg ccttgacgcg gtgcttcagc
     3961 gccagcgtgc gcacg
//
LOCUS       DATIKR010000267         2190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_185261, whole genome shotgun sequence.
ACCESSION   DATIKR010000267 DATIKR010000000
VERSION     DATIKR010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185261"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VLL76_04115"
     CDS             complement(<1..440)
                     /locus_tag="VLL76_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28713.1"
                     /translation="MRLRQVYLALLLLWVLVAGWQAAEHLRVSAAARDTLINRSRDIS
                     GTVSVVLRSQRHFNLISRERLESALAALIKTNELTSVVILNVRGKSVAAAGAPLDPEN
                     LVLAPAGIRWDKGFVTLMNLVDLGTNVTADLEDTRAPIVISRADL"
     gene            complement(528..1667)
                     /locus_tag="VLL76_04120"
     CDS             complement(528..1667)
                     /locus_tag="VLL76_04120"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28714.1"
                     /translation="MKSYPVFPRRASQSGLVFALAALLGLGAVADRAAAQARAAGAAS
                     HPPATDIGRATVTVDPETRRVFVVTDDETAEHVRQVINDLDRPTPQVLIRCVFLEATF
                     TDDLDLGVDGDYTHNIASSMVKEFSGLGTARTAFNLASSGGIYTLLGQDLQLTLAALA
                     RAGRTEILSRPSILARNNQPATISLGQQVPLITGTRFDTFGNQINTITYQNVGINLTV
                     TPFITTDGMVEMVLVPQISELADRSQWVPIATGGDNNGAVSVPVINSRSADTVVVVPD
                     GQTVVIGGLLQSKNLESTSKVPLLGDIPLVGLLFRHQVSTKAKTELMIFMTPHIVEPP
                     GDLAAITGRERGRQELVPKAFTEEDLNRYLDNLPPADPAPIRRRW"
     gene            complement(1689..>2190)
                     /locus_tag="VLL76_04125"
     CDS             complement(1689..>2190)
                     /locus_tag="VLL76_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28715.1"
                     /translation="QETSDLVASLFQDTASNRNQQQQRGGRGSFRDPQGGGAAGQSTR
                     LMRQSRVLAVPDHRTRSVVVTAARETMTQIEAMLKQLDSDPARQQRVFVFEVQNTDPT
                     TVQATLDSLFSEQRAGTAARSGTTVGQAGTQLTTRAQRQNQNAPVGNRNTAGFGATGG
                     TRGFGN"
BASE COUNT          332 a          612 c          843 g          403 t
ORIGIN      
        1 aggtcggctc gggagatgac aatcggcgcg cgagtgtctt cgaggtcggc ggtgacgttg
       61 gtgccgagat ccacaaggtt catcaacgtg acgaatcctt tatcccaccg gatgccggcg
      121 ggggctagga cgagattttc cgggtcgagc ggcgcgccgg cggcggcgac gcttttgccg
      181 cggacgttga ggatgaccac gctggtgagt tcgttggttt taatcagggc ggcgagcgcg
      241 gattcgaggc gctcgcggga gatgaggttg aagtggcgct gggatcgcag cacgacgctg
      301 accgtgcccg agatgtcccg ggagcggttg atgagggtgt cgcgggcggc ggcgctgacg
      361 cggaggtgct cggcggcctg ccagccggcc acgagcaccc acagcagcag cagcgcgaga
      421 tagacttggc ggaggcgcat gtcggcggtt ggcgtgtggg tttgccgcaa aagccccgct
      481 tggggaggct gggacgcccg cgctccactc gcgtcgggcg ggcgcggtca ccagcgccgc
      541 cggatcggcg ccggatcggc cggcgggagg ttgtcgaggt aacggttcaa atcctcctcc
      601 gtgaacgcct ttgggacgag ttcctgccgt ccgcgctccc tgccggtaat ggcggcaagg
      661 tcgccggggg gttccacgat gtgcggggtc atgaaaatca tcaactcggt cttggccttg
      721 gtgctgactt ggtgcctgaa cagcaggccg acgagcggga tgtcgccgag caggggcacc
      781 ttgctggtgg attccaagtt cttgctctgc agcaggccgc cgatgacaac ggtctggccg
      841 tcgggcacga ccaccacggt gtcggcggag cgcgagttga tgacgggaac actgacggcg
      901 ccattgttgt cgccgccggt ggcgattggg acccattgcg agcggtcggc gagttcggat
      961 atttgcggaa ccagaaccat ctcgaccatg ccgtccgtgg taatgaacgg cgtgacggtg
     1021 agattgatgc cgacgttctg gtaggtgatt gtgttaattt gattgccgaa ggtgtcgaag
     1081 cgggtgccgg tgatgagcgg cacctgctgg ccaaggctga tggtcgcggg ctggttgttg
     1141 cgggcgagga tggacgggcg ggagaggatt tccgttctcc cggccctggc cagcgcagcg
     1201 agcgtgagtt ggaggtcctg ccccagcaac gtgtaaatgc cgccgctgga cgcaaggttg
     1261 aaggccgtcc tggcggtgcc caagccgctg aactccttca ccatcgagct ggcgatattg
     1321 tgcgtgtaat cgccgtccac gcctaggtcg aggtcgtcgg tgaaggtggc ctcgaggaag
     1381 acgcaccgga tcagcacctg cggggtgggg cggtcgaggt cgttgatgac ttggcgcacg
     1441 tgctcggcgg tttcgtcgtc ggtgacgaca aacacgcggc gtgtttccgg gtccacagtg
     1501 acagtcgccc tgccgatgtc cgtggcgggc gggtgactgg cggcgccggc ggcgcgggct
     1561 tgggcggcgg cgcggtccgc cacagcacca agcccgagca gggccgccaa ggcgaagacg
     1621 aggccgctct gggaagcccg gcggggaaag acgggatagg atttcatggc gtggaattcc
     1681 aatcggattc aattgccaaa accgcgggtg ccgccggtgg cgccaaagcc ggcggtgttg
     1741 cggttgccga cgggggcgtt ttgattctgc cgctgggccc gggtggtcaa ctgcgtgccc
     1801 gcttggccga cggtggtgcc ggagcgcgcc gccgtgccgg cgcgctgctc gctgaatagg
     1861 ctgtccagcg tcgcttggac ggtggtcgga tcggtgttct ggacctcgaa gacgaacact
     1921 ctttgctggc gcgcggggtc ggaatcgagc tgcttcaaca tggcctcgat ctgggtcatg
     1981 gtttcacgcg cggcggtgac gacgacggag cgggtgcggt ggtcgggaac ggcaagaacg
     2041 cggctctggc gcatgaggcg ggtgctttgg ccggcggcac ccccgccctg cggatcgcgg
     2101 aaggagcctc tcccgccgcg ttgctgttgc tggttgcggt tgctcgcagt gtcttggaag
     2161 aggctggcga cgaggtcgga cgtctcctgc
//
LOCUS       DATIKR010000268         2400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_4277, whole genome shotgun sequence.
ACCESSION   DATIKR010000268 DATIKR010000000
VERSION     DATIKR010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4277"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VLL76_04130"
     CDS             <1..373
                     /locus_tag="VLL76_04130"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV28716.1"
                     /translation="VFAAKDQGVVVVRPQGDTLMAEELRRGRVHLYPGHPDDATAFSL
                     MESQACGLPAVIRPLGAAPERVGNGETAYVAPDDDAFANLAAMLLSNDEVFGSMSAAA
                     RARYAGRDWDQAAARLEAMLG"
     gene            370..1398
                     /locus_tag="VLL76_04135"
     CDS             370..1398
                     /locus_tag="VLL76_04135"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV28717.1"
                     /translation="MMRLLQAMAGADHGGAEAFFERLTMALQRAGIVEQRVLIRDNPR
                     RAAHLRQAGVNVIELPFGGVLDLKTRFGFKRVVKDFAPRIVLTWMNRATKFCPQGDFI
                     HVGRLGGYYDLKYYRHCKQLIGNTKDICDWVIGQGWDPARVHYVPNFVAEARAEAVHR
                     DTFATPPHAPLILALGRLHQNKAFDVLIKAVAAIPDVYLWIAGEGPLRAELEALATHL
                     GVMPRVRFLGWRDDVASLFAAADLFVCPSRHEPLGNVVIEAWAQGIPVVAAASQGPSQ
                     LISDGIDGVLVPVDDAAAMGLAIRRVLFERGLAENIGASGRKAFEQRFTEAAVVERYR
                     EFFDKVAG"
     gene            1398..>2400
                     /gene="asnB"
                     /locus_tag="VLL76_04140"
     CDS             1398..>2400
                     /gene="asnB"
                     /locus_tag="VLL76_04140"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HSV28718.1"
                     /translation="MCGIAGIVTRDGSTPDGALLDRLAAALEHRGPDGQGRTVRDGVG
                     LVQTRLAIIDLEGGKQPILDNEGRAIVANGEVYNYVELRAEMPDIRFATGSDCEPPLH
                     LYAAEGDCFAARLRGMYAGAIHDPHHGRVVLTRDPFGIKPLYVAEGPWGLAFASEAQA
                     LVAAGLVAPQVDARARDELLQLQFTTGADTIFSGIRRVLPGETLVVEQGRVTETRRLS
                     ALPADGRVEGDTDQLLYQLDTVLMESVELHQRSDVPYGMFLSGGIDSSVLLAMMARLN
                     PRPVLAFTAGFPGTKARDEREHARELAKAVGAEHVEVEFTEADFWSLLPRVAAAMDDP
                     "
BASE COUNT          344 a          854 c          824 g          378 t
ORIGIN      
        1 ggtgttcgcg gccaaggacc agggcgtggt ggtggtgcgg ccgcagggcg acaccctgat
       61 ggccgaggaa ttgcggcgcg gccgcgtcca cctctatccc ggccaccccg acgatgccac
      121 cgccttcagc ctgatggaaa gccaggcctg tggtttgccg gcggtgatcc ggccgctggg
      181 cgcggcgccc gagcgggtcg gcaacggcga gaccgcctat gtcgcccccg acgacgacgc
      241 cttcgccaac ctggccgcca tgctgctgtc caacgacgag gtgttcggct cgatgagcgc
      301 cgccgcccgc gcccgctatg ccggccgcga ctgggaccag gccgccgccc ggctggaggc
      361 gatgctggga tgatgcggct gctgcaggcc atggccggcg ccgaccacgg cggcgccgaa
      421 gctttcttcg aacgcctgac catggcgctg caacgcgccg gcatcgtcga acagcgcgtg
      481 ctgatccgcg acaatccccg ccgcgccgcg catctgcgcc aggccggggt gaacgtgatc
      541 gaactgccgt tcggcggcgt gctggacctt aagacccgct tcggcttcaa gcgcgtcgtg
      601 aaggacttcg cgccgcgcat cgtgctgacc tggatgaacc gggccaccaa attctgcccc
      661 cagggcgact tcatccatgt cggccggctg ggcggctatt acgacctgaa atattaccgc
      721 cactgcaagc agctgatcgg caacaccaag gacatctgcg actgggtgat cggccagggc
      781 tgggacccgg cgcgggtgca ttacgtgccc aatttcgtgg ccgaggcgcg ggccgaggcg
      841 gttcaccgcg acaccttcgc caccccgccg catgcgccgc tgatccttgc cctgggccgc
      901 ctgcaccaga acaaggcgtt cgacgttctg atcaaggcgg tcgccgccat tcccgacgtc
      961 tatctgtgga tcgccggcga aggcccgctg cgcgccgagc tggaagcgct ggcgacccat
     1021 ctgggggtga tgccgcgcgt gcgcttcctg ggctggcgcg acgacgtcgc ctcgctgttc
     1081 gccgccgccg atctgttcgt ctgcccgtcg cgccacgagc ccctgggcaa cgtggtgatc
     1141 gaggcctggg cgcagggcat cccggtggtg gccgccgcca gccagggtcc cagccaattg
     1201 atcagcgacg gcatcgacgg cgtgctggtg ccggtggacg acgccgccgc catgggcctt
     1261 gccatccgcc gcgtgctgtt cgagcgtggt ctggccgaga acatcggcgc ctcggggcgc
     1321 aaggcgttcg agcaacgctt caccgaggcg gccgtggtcg agcgctatcg cgagttcttc
     1381 gacaaggtag cgggctgatg tgcggcatcg ccggcatcgt cacccgtgac ggctccacgc
     1441 ccgacggcgc cttgctggac cggctggccg ccgctttgga gcatcgcggc cccgacggcc
     1501 agggccgcac cgtccgtgac ggcgtcgggc tggtgcagac ccggctggcc atcatcgacc
     1561 tggaaggcgg caagcagccg atcctggaca acgagggccg cgccatcgtc gccaatggcg
     1621 aggtctacaa ttacgtggaa ttgcgggccg agatgcccga catccgcttc gccaccggct
     1681 cggactgcga gccgccgctg cacctttacg ccgccgaggg cgattgcttc gccgcccgcc
     1741 tgcgcggcat gtatgccggc gccatccacg atccccatca cggccgcgtg gtgctgaccc
     1801 gcgacccgtt cggcatcaag ccgctttacg tcgccgaggg gccgtggggc ctggccttcg
     1861 cctcggaggc ccaagccctg gtggccgccg ggctggtggc gccgcaggtg gacgcacgtg
     1921 cccgcgacga attgctgcaa ctgcaattca ccaccggcgc agacaccatc ttttccggca
     1981 tccgccgggt gctgccgggc gaaaccctgg tggtggagca gggccgcgtc accgagaccc
     2041 gccgcctgtc cgccctgccc gccgacggcc gggtcgaggg cgacaccgac cagttgctgt
     2101 accagctcga caccgtgctg atggaatcgg tcgaactgca ccagcgctcg gacgtgccct
     2161 atggcatgtt cttgtcgggc ggcatcgatt cgtcggttct gctggcgatg atggcacggc
     2221 tcaaccctcg cccggtgctg gccttcactg ccggcttccc cggcaccaaa gcccgcgacg
     2281 agcgcgagca tgcccgcgag ctggcgaagg cggtcggcgc cgagcatgtg gaagtcgagt
     2341 tcaccgaggc cgatttctgg tcgctgctgc cacgggtggc cgccgcgatg gacgaccccg
//
LOCUS       DATIKR010000269         2393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_233957, whole genome shotgun sequence.
ACCESSION   DATIKR010000269 DATIKR010000000
VERSION     DATIKR010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233957"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VLL76_04145"
     CDS             <1..289
                     /locus_tag="VLL76_04145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV28719.1"
                     /translation="EAIAKRYLAFIRDSFFIPLCREIRAAAGLDEGEPVQEAEIECVA
                     GLHGAIGYVGLRRWVFKTPVMEDMDTVVTALVTTFVEGAPAAFRTLDAARR"
     gene            354..677
                     /locus_tag="VLL76_04150"
     CDS             354..677
                     /locus_tag="VLL76_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28720.1"
                     /translation="MRTVILAALCTLALSGCSSAPRPLVPDTAQGPASYVCYSSMVSN
                     PEEVRAIAERQCGRWGYGVAGLIGQSWTPLRCGALTPTVAAFQCGSGSVMAPLPALPP
                     PEPAQ"
     gene            complement(935..1567)
                     /locus_tag="VLL76_04155"
     CDS             complement(935..1567)
                     /locus_tag="VLL76_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV28721.1"
                     /translation="MKVLLADDHALFREGIRLVLESLVPDPLEVVEAGDFPQALAALR
                     EVPDVDIGLVDLSMPGMDGFSAIQLIRRTAPDLFLVVVSASEDPHDIRRALDAGAHGY
                     ITKSSSSAAMLDGIRSVLDGDTFVSPNIVLPEPSKAGGEPDSRTIEALLTPRQRDVLA
                     MLRQGKSNKEIARDLHLAEITVKLHVTAILRSLGVENRTQAAILAAKLGG"
     gene            1739..1942
                     /locus_tag="VLL76_04160"
     CDS             1739..1942
                     /locus_tag="VLL76_04160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28722.1"
                     /translation="MLRKPPINVGDRFVKIGAFQSAIWVVERIFQLPAEPPHAHLSKE
                     GDLRDSITISIPTLSDPSFFRRA"
     gene            complement(1999..>2393)
                     /locus_tag="VLL76_04165"
     CDS             complement(1999..>2393)
                     /locus_tag="VLL76_04165"
                     /inference="COORDINATES: protein motif:HMM:NF015181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobB"
                     /protein_id="HSV28723.1"
                     /translation="IRVATIKHSHHIPAVATADAGAVETLVASADRFALLHEVAAEPE
                     PGLDALVERLAGVDLVLVEGFKFSPHPKLEVWDPALGKELRAPGDASVVALACDGAAP
                     VADRPVFARHDFDGIAAFIAAYCGLADR"
BASE COUNT          403 a          803 c          770 g          417 t
ORIGIN      
        1 cgaagccatc gccaagcgct atctggcatt catccgcgac tcgttcttca ttccgctgtg
       61 ccgtgaaatc cgcgccgccg ccggcctgga cgaaggcgag ccggtgcaag aggccgagat
      121 cgaatgcgtc gccggcctgc acggggcgat cggctatgtc ggcttgcgcc gctgggtgtt
      181 caagacgccg gtgatggagg acatggacac ggtggtgacc gccctggtca ccaccttcgt
      241 cgagggcgcg cccgccgcct tccgcaccct cgatgccgcc cgccgctgaa taggcttgcc
      301 aaccggcccc tccccggcca taaggcgacg gaggcttctt gggggaatcg accatgcgta
      361 ccgtgattct ggccgctttg tgcaccctgg cgctgtccgg ctgttcgtcg gcgccgcgtc
      421 cgctggtgcc cgacaccgcc cagggcccgg ccagctatgt ctgctattcc agcatggtca
      481 gcaatcccga agaggtgcgt gccatcgccg agcgccagtg cggccgctgg ggctatggcg
      541 tcgccggcct gatcggccag tcgtggaccc cgctgcgctg cggcgccctg accccgacgg
      601 tcgccgcctt ccaatgcggc agcggctcgg tcatggcccc gctgcccgcc ctgccgccgc
      661 cggaaccggc tcagtaacct agcggctatc cctcgcccgc ttgaggaaga gggtggggcc
      721 catgcggcac gcttgggagg gtgagggcgc tcggcctcgc ccccccaaac tcgtcacccc
      781 cgcggaggcg ggggtccatg ggtccgtccg acttcgcctc aacccattgt cccaccgata
      841 ttttttgcgg ctctcgtgga tccccgcctt cgcggggatg acgatgaggg ggacggaatg
      901 cgtcgcttga taagtctttc cgcagcctgc tgaatcagcc gcccagcttg gcggccagga
      961 tcgccgcctg ggtgcggttc tcgacgccca gcgagcgcag gatggcggtg acgtgcagtt
     1021 tcaccgtgat ctcggccaga tgcaggtcgc gggcgatttc cttgttgctc ttgccctggc
     1081 gcagcatggc gaggacatcg cgctggcgcg gcgtcagcag cgcctcgatg gttctcgaat
     1141 ccggctcgcc gccggccttg ctcggctcgg gcaggacgat gttggggctg acgaaggtgt
     1201 cgccgtcgag caccgagcga atgccgtcca gcatggcggc gctggacgag cttttggtga
     1261 tgtagccgtg ggcgccggcg tccagggcac ggcggatgtc gtgcggatct tccgaggcag
     1321 acaccaccac caggaacagg tcgggcgcgg tgcggcggat caactggatg gccgaaaagc
     1381 cgtccatgcc cggcatgctg agatcaacca ggccgatatc cacgtcggga acctcgcgca
     1441 gggccgccaa ggcctgcggg aaatcccccg cttcgaccac ttccagtggg tctggcacca
     1501 gactttcgag caccagccga attccctcgc ggaacaaggc atggtcgtct gccagaagga
     1561 ccttcattcg tcacaacccc cgtagagcat ttctcgcccc cacgaaactt taaccacaaa
     1621 atcattcgcg catcaatacc ggagctgcga aatagtggca aatccgcgca tttttgtgca
     1681 atactgaata acccgaaacg catcgcacca aagttcaaaa cataaggagc atacaatcgt
     1741 gctgcgcaag ccgccaatta atgtcggtga ccgcttcgtt aagattggag cattccaatc
     1801 ggccatttgg gttgtagagc gaatatttca gcttccggct gaaccgcccc acgctcatct
     1861 ttccaaagaa ggagatctgc gggattcgat cacgatctcc atcccgaccc tgtcggatcc
     1921 cagcttcttc cgccgggcat gagacaagag gcggagcggt ccaggcgccg ctccgccgct
     1981 tgtgccggga agaataattt agcggtcggc caaaccgcaa taggcggcga tgaacgccgc
     2041 gatgccgtcg aagtcgtggc gggcgaagac cggccggtcg gccaccggcg cggcgccgtc
     2101 gcaggccagc gccaccaccg aggcatcgcc gggtgcgcgc aattccttgc ccagtgcggg
     2161 gtcccacacc tccagcttgg ggtggggcga gaacttgaac ccctccacca gcaccaggtc
     2221 gacgccggcc aggcgctcga ccagcgcgtc gagtccgggt tcgggttcgg cggccacttc
     2281 gtgcagcagg gcgaagcggt cggccgacgc caccagcgtc tcgaccgcgc ccgcgtcggc
     2341 ggtggccacg gccgggatgt gatggctgtg cttgatggtg gcgacccgga tcc
//
LOCUS       DATIKR010000270         3967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_197725, whole genome shotgun sequence.
ACCESSION   DATIKR010000270 DATIKR010000000
VERSION     DATIKR010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197725"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VLL76_04170"
     CDS             complement(<1..266)
                     /locus_tag="VLL76_04170"
                     /inference="COORDINATES: protein motif:HMM:NF012705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HSV28724.1"
                     /translation="MSAAGSSFYWAMRLLPAERRDAMFALYGYCRGLDDVADGPGTLE
                     AKRARLAVMRGVVAALYETGVALDPLVAPLAPAIKRYGLPRAEL"
     gene            complement(263..1108)
                     /locus_tag="VLL76_04175"
     CDS             complement(263..1108)
                     /locus_tag="VLL76_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004156745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HSV28725.1"
                     /translation="MSPAAAAPLPATTGKTAGGENFPVASLLMPIAVRRQVMAFYRFA
                     RMADDIADDPVLTAEEKLIRLDGLDAALAGKPGVPEAAAFRAAVADDPVLIGHAAQLL
                     QAFRRDAVSDHCRDWADLMTYCRYSAAPVGRFLLDLHREGAETMAPGDALCAAHQILN
                     HLQDCGIDYRALGRVYIPRDWLLAHGLANDVFAGHRSPPELRAVFDQVLDAVDGLIEL
                     ALPLPHHIRDMRLRLEAAATIAVAQKLSALLRGKDPLAGPVKLSPAQYLTAFVTGIAR
                     GLKRR"
     gene            1193..2017
                     /locus_tag="VLL76_04180"
     CDS             1193..2017
                     /locus_tag="VLL76_04180"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HSV28726.1"
                     /translation="MTQLAHQVRRLDRERFVTTLFAPEDARESLLALYAFNAEVARVR
                     ESVRESMAGMIRLQWWREALAGERPAETVRHPVAAPLIAACRAHKVSGEAFERLLDAR
                     ERDLSPQVPADLEELEGYAADTSATITQLALELLDARDEASLAAGKAVGTAFALVGLL
                     RSVPYQIATGRLMLPADALRQAGVDAEAVMVGTADPGAVATAAKPVGERARALLAEAR
                     RHKTEKRALAALLPAVLTSGHLRDLERGGWNVFDPRLKKPRTMPVRLAVNALLRRY"
     gene            complement(2020..3432)
                     /locus_tag="VLL76_04185"
     CDS             complement(2020..3432)
                     /locus_tag="VLL76_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HSV28727.1"
                     /translation="MKKHVAFPGRLVIVGFGSIGQGVLPLILRHIDMDPRKITIVTAE
                     ERGRDVANEYGITFVNRALTRDNYRDVLGPLVGAGDFVLNVAVDVSSVALVEFAWERG
                     ALYLDTCVEPWAGGYTDTSLSPSLRSNYALRESALALKKAGGKRPTALVTHGANPGLV
                     NHFVKQAMLNIAKDTGLDAKVPASREEWAALAERLSIKVVHVAERDTQVAAHRPKRVG
                     EFVNTWSIDGFVGEGCQPAELGWGSHERHFPADGARHDFGGGAAIYLNRPGASVRVRT
                     WTPQEGPFHAFLITHGEAISVSDYFTVKDGDKVRYRPTCHYSYHPCDDAVLSVHEVAG
                     KNWNLQADKRLMMDEITSGIDELGVLLMGHAKGAYWYGSQLSIDEARRLCPHNNATSL
                     QVCVAVLSGMVWAMENPEAGLVEPEEIDFQRCLEICAPYLGPVVGAYSDWTPLADRGR
                     LFPEDIDTDDPWQFKNFRVV"
     gene            complement(3461..>3967)
                     /locus_tag="VLL76_04190"
     CDS             complement(3461..>3967)
                     /locus_tag="VLL76_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HSV28728.1"
                     /translation="GGFPVSYPDLTPPPLADFIAAIADGVHALNLPAHTEIWCEPGRA
                     LVASGQSVVVRVEARRGDALHINDGVYGTLSDAGVPGFRFPCRLIRAGAVADALEAFT
                     FFGPTCDSADRMKGPFMLPADVREGDWIEIGQLGAYGTTLRTPFNGFDQSVMVEVADR
                     PLLDTPGH"
BASE COUNT          625 a         1325 c         1426 g          591 t
ORIGIN      
        1 tccagttcgg cgcgcggcag gccatagcgc ttgatggccg gggccagcgg cgccaccagc
       61 gggtccagcg ccaccccggt ctcatacagt gcggccacca cgccgcgcat cacggccagg
      121 cgggcgcgct tggcctcgag cgtgccgggg ccgtcggcga cgtcgtcgag gccgcggcaa
      181 tagccataga gcgcgaacat ggcgtcgcgg cgctcggccg gcagcaggcg catggcccaa
      241 tagaaggagc tgccggccgc gctcatcgcc gcttcaggcc gcgcgcgatg ccggtgacga
      301 aggcggtcag atactgggcg ggcgacagct tgaccggccc ggccagcggg tccttgccgc
      361 gcagcagggc tgacagcttc tgggcgacgg cgatggtggc ggcggcctcc agccgcagcc
      421 gcatgtcgcg gatgtggtgg ggcaggggca gggccaattc gatcagcccg tccacggcgt
      481 cgagcacctg gtcgaacacc gcccgcagct cgggcggcga ccggtggccg gcgaacacgt
      541 cgttggccag gccgtgagcc agcagccagt cgcgcgggat gtatacccgc cccagcgccc
      601 ggtaatcgat gccgcaatcc tgcaggtggt tgaggatctg gtgggcggcg cacagggcgt
      661 cgcccggcgc catggtctcg gccccctcgc ggtgcaggtc gagcaggaag cggcccaccg
      721 gtgccgccga atagcggcaa taggtcatca gatcggccca gtcgcggcaa tggtcgctga
      781 ccgcgtcgcg gcggaaggcc tgcagcaatt gcgcggcgtg gccgatcaag accgggtcat
      841 cggcaacggc ggcgcggaac gcggcggctt ccggcacgcc gggcttgccg gcaagggcgg
      901 cgtccagccc gtccaggcgg atcagctttt cctcggccgt cagcaccgga tcgtcggcga
      961 tgtcgtcggc catgcgggcg aagcggtaga acgccatcac ctgacgtcgc accgcgatcg
     1021 gcatcagcag cgacgcgacg gggaaattct cgccgccggc ggtcttgccg gtggtcgcgg
     1081 gcagtggggc ggcggcggct ggggacacct gcaggctccc attggtgcaa caagcggaag
     1141 tctttatata tgcaccaact cgcttcaccc gcctagggga aacaccttat ccatgaccca
     1201 gcttgcccat caggtgcgcc gcctggatcg cgaacgtttc gtcactaccc tgttcgcgcc
     1261 ggaggacgcg cgcgaaagcc tgttggcgct gtacgccttc aacgcagagg tggcgcgggt
     1321 gcgcgagagt gtccgggaat ccatggccgg catgatccgg ttgcaatggt ggcgcgaggc
     1381 gctggcgggc gagcgtccgg ccgagaccgt ccgccatccg gtggcggccc ccctgattgc
     1441 cgcctgccgc gcccacaagg tcagcggcga ggcgttcgaa cgtctgttgg acgcccgcga
     1501 gcgcgatctg tcgccacagg tgccggcgga tctggaggaa ctggagggct atgccgccga
     1561 cacctcggcg acgatcaccc aattggcgct ggaattgttg gacgcccgcg acgaagccag
     1621 tctggcggcg ggcaaggcgg tgggcaccgc cttcgccctg gtcggcctgc tgcgctcggt
     1681 gccctaccag atcgccaccg gccggctgat gctgcccgcc gacgcgctgc gccaggccgg
     1741 cgtggacgcc gaagcggtga tggtgggcac ggccgacccg ggcgcagtcg ccaccgccgc
     1801 caagccggtg ggcgagcgtg cccgcgccct gctggccgag gcccgccgtc acaaaacgga
     1861 aaagcgcgcc ctggccgcct tgctgccggc ggtgctgacg tcgggccatc tgcgcgacct
     1921 cgagcgcggc gggtggaacg tgttcgaccc gcgcctcaag aagccccgca ccatgccggt
     1981 gcggctggcg gtcaacgcat tgctgcggcg gtattagcct cacaccaccc ggaagttctt
     2041 gaactgccag gggtcgtcgg tgtcgatgtc ctcggggaac aggcggccgc ggtcggccag
     2101 cggggtccag tcggaatagg cgccgaccac cggccccaga tagggggcgc agatctccag
     2161 gcagcgctgg aagtcgatct cttccggctc gaccaggccg gcctcggggt tttccatcgc
     2221 ccacaccatg cccgacagca ccgcgacgca gacctgcagg ctggtggcat tgttgtgggg
     2281 gcacaggcgg cgggcctcgt cgatggataa ttgcgaaccg taccaatagg cgcccttggc
     2341 atggcccatc agcagcacgc ccagttcgtc gatgcccgag gtgatctcgt ccatcatcag
     2401 ccgcttgtcg gcctgcaggt tccagttctt tcccgcgacc tcgtgcacgc tgaggaccgc
     2461 gtcgtcgcag gggtgatagg aatagtggca ggtcgggcga tagcggacct tgtcgccgtc
     2521 cttgacggtg aaatagtccg acaccgagat ggcctcgcca tgggtgatca ggaaggcgtg
     2581 gaacggacct tcctgcggcg tccaggtgcg gacgcggacg ctggcaccgg ggcggttgag
     2641 gtagatggcg gcgccgccgc cgaaatcgtg gcgggcgccg tcggcgggga agtggcgctc
     2701 gtggctgccc cagcccaatt cggccggctg gcagccctcg ccgacgaagc catcgatgga
     2761 ccaggtgttg acgaactcgc cgacccgctt gggccggtgg gcggcgacct gggtgtcgcg
     2821 ctcggccaca tgcaccacct tgatggacag gcgctcggcc agggcggccc attcctcgcg
     2881 gctggccggg accttggcgt caaggccggt gtccttggcg atgttcagca tcgcctgctt
     2941 gacgaaatgg ttgaccaggc cgggattggc gccatgggtg accagcgcgg tggggcgctt
     3001 gccgccggcc ttcttcagcg ccagcgcact ctcgcgcagg gcgtagttcg agcgcagtga
     3061 cggcgacagc gaggtgtcgg tgtagccgcc ggcccacggc tcgacgcagg tgtcgagata
     3121 aagggcgcct cgctcccacg cgaattcgac cagagccacc gaagacacgt cgaccgccac
     3181 gttcagcacg aagtcgccgg cccccaccag cggccccagc acgtcgcggt aattgtcgcg
     3241 ggtcagcgcc cggttcacaa aggtgatgcc gtactcgttc gccacgtcgc ggccgcgttc
     3301 ctcggcggtg acgatggtga tcttgcgcgg atccatgtcg atgtggcgca ggatcaacgg
     3361 caggacaccc tggccgatgc tgccgaaacc cacgatgacc aggcggcccg ggaaggcgac
     3421 gtgctttttc atgatgatcc cccagggtcg tacattcttg ttagtggccg ggcgtgtcga
     3481 gcagcggccg gtcggcgacc tcgaccatca ccgactggtc gaagccgttg aacggcgtgc
     3541 gcaacgtggt gccataggca cccaactggc cgatctcgat ccaatcgccc tctcggacgt
     3601 cggccggcag catgaatgga cctttcatgc ggtcggccga atcgcaggtc ggcccgaaaa
     3661 aggtgaaggc ttccaacgcg tccgccacgg cgccggcgcg gatcaggcgg caggggaagc
     3721 ggaagccggg cacgccggcg tcggacaggg tgccgtagac gccgtcgttg atgtgcagcg
     3781 catcgccgcg ccgcgcctcg acccgcacca ccaccgactg gcccgacgcc acaagtgcgc
     3841 ggccgggctc gcaccagatt tcagtgtggg cgggaaggtt cagggcatgc accccgtcgg
     3901 cgatggcggc gatgaaatcg gccagcggcg ggggcgtcag gtcaggatag ctgaccggga
     3961 agccgcc
//
LOCUS       DATIKR010000271         1945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_197732, whole genome shotgun sequence.
ACCESSION   DATIKR010000271 DATIKR010000000
VERSION     DATIKR010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197732"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1312
                     /locus_tag="VLL76_04195"
     CDS             <1..1312
                     /locus_tag="VLL76_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28729.1"
                     /translation="ATLAMLAAGGQLSWLAALGGALVALALTAVAVWPVLRDLSAIAA
                     WTRELAQGVDVGPPPPGREHLMDDMVSSVAQLRRAWQTRQAEIAARARWNESLFDTLP
                     DPLVLLDEARRVVRVNLAAAREFGVDLAGRDLAGALRDPALLEAVDEVLAGVQSRQVD
                     LTLPVPVERSFQVVIEHLGAGAPDGTVAILALHDVTTVRRMEQMRADFVANASHELRT
                     PLATLLGFIDTLRGPARDDAEARDRFLDIMFEQGSRMARLINDLLSLSRIEMAEHDHP
                     ADPVDLGHVVERGAAALAPLAAAKNIEIRLDVADDARMVPGQQDELAQLVQNLMDNAV
                     KYGRDGTSVEVTLTAARPGHVRLAVRDHGEGIAKEHLPRLTERFYRVDTARSRKLGGT
                     GLGLAIVKHIVNRHRGQLAIDSTVGEGSEFAVTLPAAELRRKAG"
     gene            1344..>1945
                     /locus_tag="VLL76_04200"
     CDS             1344..>1945
                     /locus_tag="VLL76_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbosone dehydrogenase"
                     /protein_id="HSV28730.1"
                     /translation="MRVLAVALLLLAAPALAQVTPGDRFQVSPRDLPPPHATPSAGNA
                     PEAVPRPKGTSLTVPAGYRATLFAEGLDHARNLIAAPDGTVILAQSRQDRITTLKDDD
                     GDGRADRVATFADGFDQPHGLALHGGDLWVADLQGVWRLPWPQGGKRQRVTPPGALGD
                     TGGHWTRNLAIAPKGDRFYVAIGSEGNIAEEPPPRATIRE"
BASE COUNT          275 a          696 c          701 g          273 t
ORIGIN      
        1 ggcgacgctg gccatgctgg cggcgggcgg gcaattgtcg tggctggcgg ccttgggcgg
       61 cgccctggtg gcgctggcgc tgaccgcggt ggcggtgtgg ccggtgctgc gcgacctcag
      121 cgccatcgcc gcatggacgc gcgagttggc ccagggcgtc gacgtcggcc cgccgccgcc
      181 ggggcgcgag catctgatgg acgacatggt cagctcggtg gcgcagttgc ggcgcgcctg
      241 gcagacccgc caggccgaaa tcgccgcccg cgcccgctgg aacgaaagcc tgttcgacac
      301 gctgcccgat ccgctggtgc tgctggacga ggcgcgccgg gtggtgcgcg tcaacctggc
      361 cgcagcccgc gagttcggcg tcgacctggc cggccgcgat ctggcgggag cgttgcgcga
      421 cccggccttg ctcgaggcgg tcgacgaggt gctggccggg gtgcagtcgc gccaagtgga
      481 tttgaccttg ccggtgccgg tggaacgctc gttccaggtg gtgatcgagc acctgggggc
      541 cggcgctccc gacggcaccg tcgccatcct ggcgctgcac gatgtcacca ccgtgcgccg
      601 catggaacag atgcgcgccg acttcgtggc caacgccagc catgaattgc gcacgccgct
      661 ggcgaccctg ctgggcttca tcgacaccct gcgcggtccc gcccgcgacg atgccgaggc
      721 gcgcgaccgc ttcctcgaca tcatgttcga gcagggctcg cgcatggcgc ggctgatcaa
      781 cgacctgctg tcgctgtcgc gcatcgagat ggccgagcac gatcatcccg ccgatccggt
      841 ggatctgggc catgtggtcg agcgcggcgc cgccgccctg gcgccgctgg ccgccgccaa
      901 gaacatcgag atccgcctgg acgtggccga cgacgcccgc atggtgccgg gccagcagga
      961 cgagctggcg caattggtgc agaacctgat ggacaatgcc gtcaaatacg gccgcgacgg
     1021 tacttcggtg gaggtcacgc tgacggccgc caggccgggc catgtgcggc tggcggtgcg
     1081 cgaccacggc gaaggcatcg ccaaggaaca cctgccgcgc ctgaccgaac gcttctatcg
     1141 ggtggacacg gcgcgctcgc gcaagctggg cggcaccggc ctgggcctcg ccatcgtcaa
     1201 gcacatcgtc aaccgccatc gcggccagtt ggcgatcgac tcgacggtcg gcgagggctc
     1261 ggaattcgcg gtgacgctgc cggcggcaga gcttcggcgc aaggcggggt aaggaggcca
     1321 ttcattcccg gagggtcgtc gcaatgcgtg ttctcgccgt cgccctgctg ctgctcgccg
     1381 cccccgccct ggcccaggtg acgccgggcg accgcttcca ggtgtcgccg cgcgacctgc
     1441 cgccaccgca cgccaccccg tcggccggca atgcccccga ggccgttccg cgcccgaaag
     1501 gaacatcctt gacggtgccc gccggctacc gcgcgacgtt gttcgccgaa gggctggacc
     1561 acgcccgcaa cctgatcgcg gcgcccgacg gcaccgtcat cctggcgcag tcgcgccagg
     1621 accgcatcac caccctcaag gacgacgacg gcgacggccg cgccgaccgg gtggcgacct
     1681 tcgccgacgg cttcgaccag ccgcacgggc tggcgctgca tggtggcgat ctttgggtgg
     1741 ccgacctgca aggggtgtgg cggttgccgt ggccgcaggg aggaaagcgg caaagggtga
     1801 cgccccccgg cgccctgggc gacaccggcg gccactggac gcgcaacctg gccatcgctc
     1861 ccaagggcga ccgcttctat gtcgccatcg gctcggaagg caacatcgcg gaggagccgc
     1921 cgccgcgcgc caccatccgc gaatt
//
LOCUS       DATIKR010000272         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_185359, whole genome shotgun sequence.
ACCESSION   DATIKR010000272 DATIKR010000000
VERSION     DATIKR010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185359"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..490
                     /locus_tag="VLL76_04205"
     CDS             170..490
                     /locus_tag="VLL76_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28731.1"
                     /translation="MWRVLSAGLFVCLLAPLAAKADQVTAVQAVRGQPKVIDALVDNG
                     GNMFVSVKNDRTAWGQFATHLCNVVRPHQARIFRIQVVDVTTVAFGKPPSAWHKLAEA
                     RCGS"
     gene            complement(512..1081)
                     /locus_tag="VLL76_04210"
     CDS             complement(512..1081)
                     /locus_tag="VLL76_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle transcriptional regulator TrcR"
                     /protein_id="HSV28732.1"
                     /translation="MALPLMPKATAVWLVENTALSFEQIADFCGLHPLEVQAIADGEV
                     ATGIVGLDPVANGQLTRPEIERCEADQDGRLKLIVTDFPQPRAKPKGARYTPVSKRQD
                     RPDAIAWLLKHHPELSDAQLCKLIGTTKPTIQSVREKTHWNATNIKARNPVTLGLCTE
                     AELEKAVALARPRGSVAPQANYESEDHAE"
     gene            complement(1227..>1563)
                     /locus_tag="VLL76_04215"
     CDS             complement(1227..>1563)
                     /locus_tag="VLL76_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV28733.1"
                     /translation="VVGGDYIPRNVKCLATEGRLVNIAFMKGSTAEVNFMSVMLKRLT
                     LTGSTLRPQSDEAKARMAASLREKVWPLIEQGRIRPVVHATFPLAKAAEAHGLMETNA
                     HIGKIVLTL"
BASE COUNT          228 a          502 c          541 g          292 t
ORIGIN      
        1 ggcggtgcgg tccttgcgcg acctgccgct gaccttcccc gagaccaccg gtggccccgc
       61 cccctgcggc ggcggccgct gccaccgtcc ggtcgggtga agcccgtatg gacagactgt
      121 gcgcaacagg cgcacacttt aatcaatcaa atgtgggagg cgtgaagcca tgtggcgggt
      181 gttgagtgcc ggtctgttcg tctgcctgct ggcgcccttg gcggccaagg ccgatcaggt
      241 gacggcggtg caggcggtgc gcggccagcc caaggtgatc gacgccctgg tggacaacgg
      301 cggcaacatg ttcgtgtcgg tcaagaacga ccgcaccgcc tggggccagt tcgccaccca
      361 tttgtgcaat gtggtgcggc ctcatcaggc ccgcatcttc cgcatccagg tggtggacgt
      421 caccaccgtc gccttcggca agccgccctc ggcctggcat aaactggccg aggcgaggtg
      481 cgggtcctaa gacccgcccc cccagggcgc cttactcggc gtggtcttcg ctctcgtaat
      541 tggcctgggg cgccacggaa ccgcgcgggc gggccagggc gacggccttt tccagctcgg
      601 cttcggtgca caggcccagg gtgaccgggt tgcgcgcctt gatgttggtg gcgttccagt
      661 gggtcttctc gcgcaccgac tggatggtcg gcttggtggt gccgatcagc ttgcacagct
      721 gggcgtccga cagttccggg tggtgcttga gcagccacgc gatggcgtcg ggacggtcct
      781 ggcgcttcga caccggggtg tagcgggcgc ccttgggctt ggcgcgcggc tgcgggaagt
      841 cggtgacgat cagcttcagc cggccatcct ggtccgcttc gcaccgctcg atttcggggc
      901 gcgtgagctg gccgttggcg acggggtcga ggccgacgat gccggtcgcc acttcgccgt
      961 cggcgatggc ctggacttcc agcggatgca ggccgcagaa atcggcgatc tgttcgaacg
     1021 acagggcggt gttctcgacg agccaaacgg cggtcgcctt gggcatgagc ggcagggcca
     1081 taaatcctcc ttcctgggct tcgatcggtc cacctgtcca ggtgggccgg gcgccagcat
     1141 gggcaaccat cgaaatgcgc cgtagttata ggggaggtcc aacccttggt caaaccgcta
     1201 agggcaatcg gtctcccccc tctgtattac agggtcagca cgatctttcc tatgtgggcg
     1261 ttggtctcca tgagtccatg cgcctctgcc gccttggcca gggggaatgt ggcatgcacc
     1321 accgggcgga tgcggccctg ttcgatcagc ggccacacct tttcccgcag cgacgccgcc
     1381 atgcgggcct tggcctcgtc cgattgggga cgcaaggtcg agccggtcag ggtcaggcgc
     1441 ttcagcatca cggacatgaa attcacctcg gcggtcgagc ccttcatgaa ggcgatgttg
     1501 accagccggc cctcggtcgc caggcacttg acgttgcgcg ggatgtagtc gccgccgacc
     1561 acg
//
LOCUS       DATIKR010000273         2614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_89067, whole genome shotgun sequence.
ACCESSION   DATIKR010000273 DATIKR010000000
VERSION     DATIKR010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89067"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1471)
                     /locus_tag="VLL76_04220"
     CDS             complement(<1..1471)
                     /locus_tag="VLL76_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HSV28734.1"
                     /translation="MTKGRTKSVPLPTKQEVLDFIKSSPGRVGKRELARAFNLKGSDK
                     IALKAIIKELEGGGAIERGQKRRFARPGALPDMAVVEITGTDTDGELLARPLAWEEKG
                     RPPRIYVAQSRRGEIVVGVGDRVLAKLRRVRGDDYEAKPIRIVGEARARVLGVYVAMP
                     DGSGRIQPTSRKEKSDYVVPKGETNGAEEGDLVLADLLPGRFYGLRQAAVKEKIGRMG
                     EAKSVSLVAIHTNDIPFEFPDDVIRQAEACGPASMEHRIDLRPTPLVTIDGEDARDFD
                     DAVWAMPDPDPKNAGGWHCIVAIADVSWYVRPGDPLDREAYKRGNSVYFPDRVVPMLP
                     EALSNGWCSLRPNEDRGCLAVHFWLDKDGNKLRHKFVRAMMRSAARLTYNQVQQARDG
                     KPDDVTGPLLEPVIAPLYGAWNALFEARKRRGVLELDIPERKVDISPDGHVLGIKVRE
                     RFDSHRLIEDFMIQANVCAAEELERLRQPCMYRVHDQPTM"
     gene            complement(1509..1889)
                     /locus_tag="VLL76_04225"
     CDS             complement(1509..1889)
                     /locus_tag="VLL76_04225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28735.1"
                     /translation="MPETAVPPNAAILVVDDQPAMREVVRDVLEITGCRVTEAASAES
                     AKALIAQQPVQVVVTDIFMDGTRPTGVELIDHIRRTLPGVRIVAVSGGGSDALRVAAE
                     HGADAILTKPFSAQELLRAVAGSA"
     gene            complement(2109..>2614)
                     /locus_tag="VLL76_04230"
     CDS             complement(2109..>2614)
                     /locus_tag="VLL76_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV28736.1"
                     /translation="LFALTEAGDQSIIEVVDPIGTFAEAAMFSSAKFPLNCEVMAGSR
                     LIHVPAAPFMRRLSDNRALAFHLLAALSLWQKRMIHEITELKSKSPAQRLASFLLALA
                     RDGEGQAQIRLPITKAVLASRIGIAPESLSRALARLKSVGVETQGRELVLTDLAALRR
                     LVREGAE"
BASE COUNT          407 a          875 c          901 g          431 t
ORIGIN      
        1 ccatggtcgg ctggtcgtgc acccggtaca tgcagggctg gcgcaggcgt tccaactcct
       61 cggcggcgca gacgttggcc tggatcatga aatcctcgat cagccggtgg ctgtcgaagc
      121 gctcgcgcac cttgatgccg aggacgtggc cgtcgggcga gatgtcgacc ttgcgctcgg
      181 ggatgtcgag ttccagcacg ccgcgccgct tgcgcgcctc gaacagggcg ttccaggcgc
      241 catagagcgg tgcgatcacc ggctcgagca gcgggccggt gacgtcgtcg ggcttgccgt
      301 cgcgggcctg ctgcacctgg ttgtaggtca gccgtgccgc cgaccgcatc atggcgcgca
      361 cgaatttatg gcgcagcttg ttgccgtcct tgtcgagcca gaaatgcacc gccaggcagc
      421 cccggtcctc gttggggcgc aagctgcacc agccgttgga cagcgcctcg ggcagcatgg
      481 gcacgacgcg gtcggggaaa tagaccgagt tgccgcgctt gtaggcctcg cggtcgagcg
      541 ggtcgccggg ccgcacgtac cacgacacgt cggcgatggc gacgatgcaa tgccagccgc
      601 cggcattctt gggatcgggg tcgggcatgg cccacaccgc gtcgtcgaag tcgcgggcat
      661 cctcgccgtc gatggtgacc agcggcgtcg ggcgcaggtc gatacggtgc tccatggacg
      721 ccggtccgca ggcctcggcc tggcggatga cgtcgtcggg gaattcgaac ggaatgtcgt
      781 tggtgtggat ggcgaccagc gacaccgact tggcctcgcc catgcgcccg atcttttcct
      841 tcaccgccgc ctggcgcagg ccgtagaagc ggccgggcag caggtcggcc agcaccagat
      901 cgccctcttc cgccccgttg gtctcgccct tgggcaccac gtagtcggac ttctccttgc
      961 gcgaggtcgg ctggatgcgg cccgagccat cgggcatggc gacatacacg cccagcacgc
     1021 gggcgcgggc ctcgccgacg atgcggatgg gcttggcctc gtaatcgtcg ccgcgcacgc
     1081 gccgcagctt ggccagcaca cggtcgccga cgcccaccac gatctcgccg cgacgcgatt
     1141 gggcgacata gatgcgcggc ggccgccctt tctcttccca cgccagcggc cgggccagca
     1201 attcgccgtc ggtgtcggtg ccggtgatct cgaccaccgc catgtcgggc agcgcgcctg
     1261 ggcgggcgaa gcggcgcttc tggccgcgtt cgatggcgcc gccgccttcc agctccttga
     1321 tgatcgcctt cagcgcgatc ttgtccgatc ccttgaggtt gaaggcccgc gccagttcgc
     1381 gcttgccgac gcggccggga gaggacttga tgaagtcgag gacttcctgc ttggtgggga
     1441 gcggaacgct cttggtgcgg cctttggtca tggggcaaag gtagcccctg accggattta
     1501 ccacaagctc aggcggaacc ggccaccgcg cgcagcagtt cctgggccga gaacggcttg
     1561 gtcaggatcg cgtcggcgcc atgctccgcc gccacccgca acgcatcgga cccgccgccc
     1621 gacaccgcga cgatgcgtac gccgggaagg gtgcggcgga tgtggtcgat cagctcgacg
     1681 ccggtgggac gggtgccgtc catgaagatg tcggtcacca ccacctggac gggctgctgc
     1741 gcgatcagcg ccttggcgct ttccgctgag gccgcttcgg tgacgcggca accggtgatc
     1801 tccaggacat cgcggacgac ctcgcgcatg gcgggctggt cgtcgacgac caggatggcg
     1861 gcgttggggg gaactgcggt ttcgggcact ctcactcctc cacagccctc cccacagggc
     1921 catatcatga aaatctaaag caccacgatt gaacgccatc gggctgttcg atcacaacgt
     1981 tcccgatggt gcggaaccag caccttggta ttagaaggcg gcgttatttc gaacgatgcc
     2041 aaactgccgt tggatcaagc aacggcacgg tgggaggaat gcacccgccc aaggccatag
     2101 acgaccggct attcggcgcc ttcgcgcacc agccggcgca gcgccgccag gtcggtcagc
     2161 accagttcgc ggccttgcgt ctcgaccccc accgacttca gccgcgccag cgcccgcgac
     2221 aggctttccg gggcgatgcc gatgcggctg gccagcaccg ccttggtgat gggcaggcgg
     2281 atctgcgcct ggccctcgcc gtcgcgcgcc agcgccagca ggaacgacgc cagccgctgg
     2341 gcgggcgact tgctcttgag ctcggtgatc tcgtggatca tccgtttctg ccacagcgac
     2401 agggccgcca gcagatggaa ggccagggcg cggttgtcgc tgaggcggcg catgaacggc
     2461 gcggccggga cgtggataag gcgcgagccg gccatcacct cgcaattcag cgggaacttg
     2521 gcggacgaga acattgccgc ctcggcgaag gtgccgatgg gatcgaccac ctcgatgatc
     2581 gactggtcgc cggcctcggt cagggcgaac aggt
//
LOCUS       DATIKR010000274         3292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_161303, whole genome shotgun sequence.
ACCESSION   DATIKR010000274 DATIKR010000000
VERSION     DATIKR010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161303"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..804)
                     /locus_tag="VLL76_04235"
     CDS             complement(202..804)
                     /locus_tag="VLL76_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSV28737.1"
                     /translation="MKAFARLLVLGLMAVPAVAGAAESYQPHPLDQVMGKPDAKVTIV
                     EYASTTCPHCATLHNEVMPRIKKEWVDTGKAKLVYRDFPTGPAALSIGASMIAHCAGP
                     ERYYGVLGLIMQAQDKWLRSQNPLDELKRTVRMAGITGEQVDACLQRKDLQQAIVERA
                     AQAGKAHTIKSTPTVFINGEMIVGAESYDVYDRALKAASK"
     gene            complement(878..1387)
                     /locus_tag="VLL76_04240"
     CDS             complement(878..1387)
                     /locus_tag="VLL76_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HSV28738.1"
                     /translation="MTAKTPKQQKDEDRRICGMVSIAMPVDRITKPVFGKHGFVSGAL
                     IVDWASIVGSAVASHTLPVQIKFPPKERAQGTLVVKVASSAFATELQHLEPLVLERIN
                     GYFGWQAVSRLKLMHGPLPQRPAAKPPTPEPSPEAAKRLEQTLAGVEDDELRAVLERL
                     GRQVAAGKG"
     gene            1424..2470
                     /gene="mutY"
                     /locus_tag="VLL76_04245"
     CDS             1424..2470
                     /gene="mutY"
                     /locus_tag="VLL76_04245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HSV28739.1"
                     /translation="MHDLSDRLLAWYDRHRRVLPWRALPGEVADPYHVWLSEVMLQQT
                     TVQAVAPYFRAFLERWPTIVDLAAAPVDDVMHAWAGLGYYARARNLHECAKVVAGWRE
                     GRFPDEVEALRKLPGIGDYTAAAIAAIAFGRPATVVDGNVERVMARLFAVTDPLPGCK
                     PTLKKLAATLTPIERPGDYAQAAMDLGATVCTPRNPACGICPWRDACEGRRQGIAAGL
                     PAKVEKAERPTRFGIAFWTARKDGAVLLRRRPPQGLLGGMMEVPSTEWTPDAQDLDAA
                     AAQAPLTAQWRLLPGLVRHTFTHFHLELRVAAGKAGPNPVARGIWCPLDQLGDHALPT
                     VMRKVIRHALSKAY"
     gene            2479..3093
                     /locus_tag="VLL76_04250"
     CDS             2479..3093
                     /locus_tag="VLL76_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28740.1"
                     /translation="MMRKLVVSALVLASVALSAPAGAADPKPKAGAKQQHPQAEVLLM
                     LPPKGWQAVPGQKTDQMSVTRLYPPGQSEKQWTEMITVQIQPGSDMPPRAYLDTVVAY
                     SRANCEMVGPGPVTEAPINNYPSASGMVQCTKGKQSGQGNVVMVTAIKGRDGLYVVQR
                     QWRGKPFTPEQKPDISEATLKSWTAFARTIGLCDPRDAKNHPCP"
     gene            complement(3094..>3292)
                     /locus_tag="VLL76_04255"
     CDS             complement(3094..>3292)
                     /locus_tag="VLL76_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28741.1"
                     /translation="GSGQTVGKVDGETVILKNTPTGTVGKIGKDKVVTHTDGHGNTVG
                     KVGNKKVFCHSNPATGVTICK"
BASE COUNT          519 a         1154 c         1098 g          521 t
ORIGIN      
        1 cgcatctggc gggccgaggt ttcgcccatg acccagcgca acgcttcgat caggttcgac
       61 ttgccgcatc cgttcgggcc gaccacgccc gtcatgccag gctcgatcaa gagctcggtg
      121 gcatcgacga aggacttgaa gcccgacagg cgcagcttgc tgaactggat caatccccgc
      181 gccccctcac gcggcagaac cttacttcga cgcggccttc agcgccctgt catagacatc
      241 ataggattcg gcgccgacga tcatctcgcc gttgatgaag acggtcggcg tcgacttgat
      301 ggtgtgcgcc ttgccggcct gtgcggcgcg ctcgacgatg gcctgctgca gatccttgcg
      361 ctggaggcag gcatccacct gctcgccggt gatgccggcc atgcgcacgg tccgcttcag
      421 ttcatccagc gggttctgcg agcgcagcca cttgtcctgg gcctgcatga tcaaccccag
      481 cacgccgtaa tagcgttcgg gcccggcgca atgggcgatc atcgaggcgc cgatggacag
      541 cgccgccgga ccggtgggga agtcgcggta gaccagcttg gccttgccgg tgtccaccca
      601 ctccttcttg atccggggca tgacctcgtt gtgcaaggtg gcgcagtgcg ggcaggtggt
      661 cgaggcgtac tcgacgatgg tcaccttggc gtcgggcttg cccatcacct ggtcgagcgg
      721 atgcggctga taggactcgg cggcaccggc gacggcgggc acggccatca ggccgaggac
      781 gagcaggcga gcgaaagcct tcacgggacc ctcccaggga agaaagacgg cgggatatta
      841 gggggtggcg ccgggcaaga caaggtggac cgacgggtca gcccttgccg gccgccacct
      901 gccggcccaa ccgctccagc accgcgcgca attcgtcgtc ttcgaccccc gccagcgtct
      961 gttccagtcg cttggcggcc tcgggcgacg gctccggtgt gggcggcttg gcggcggggc
     1021 gttgcggcaa cgggccgtgc atcagcttga gccgcgacac cgcctgccag ccgaaatagc
     1081 cgttgatgcg ctccagcacc agtggctcga ggtgctgcaa ttcggtggcg aaggcggagc
     1141 tggcgacctt gaccaccagg gttccctgcg cgcgctcctt gggcgggaac ttgatctgga
     1201 ccggcagggt gtgcgacgcc accgccgagc cgacgatgga cgcccagtcg acgatcagcg
     1261 cccccgagac gaagccgtgc ttgccgaaca ccggcttggt gatgcggtcc accggcatgg
     1321 cgatggacac catgccgcag atgcggcggt cctcgtcctt ctgctgcttg ggcgtcttgg
     1381 cggtcatgga cgccagcata gcatcccact atgctgcgct gccatgcacg acctgtccga
     1441 ccgattgctg gcctggtacg accgtcaccg ccgggtgctg ccgtggcgcg cgctgccggg
     1501 cgaggtcgcc gacccctacc atgtctggct gtccgaggtg atgctgcagc agaccacggt
     1561 gcaggcggtg gcgccctatt tccgcgcctt cctggaacgc tggccgacca tcgtcgacct
     1621 ggccgcggca ccggtcgacg acgtgatgca cgcctgggcg ggcctgggct attacgcccg
     1681 cgcccgcaac cttcacgaat gcgccaaggt ggtggcgggc tggcgcgagg gccggttccc
     1741 cgacgaggtc gaagccctgc gcaagctgcc gggcatcggc gactacaccg ccgccgccat
     1801 cgccgccatc gccttcggcc gcccggccac ggtggtggac ggcaatgtcg agcgggtgat
     1861 ggcgcggctg ttcgccgtca ccgatcccct gcccggctgc aagcccaccc tgaagaagct
     1921 ggccgccacc ctgacgccca tcgagcggcc gggcgattat gcccaggcgg ccatggatct
     1981 gggcgccacc gtgtgcacgc cacgcaatcc cgcctgcggc atctgtccgt ggcgcgatgc
     2041 ctgcgagggc cgccgccagg gcatcgccgc cggcctgccg gccaaggtgg aaaaggccga
     2101 gcgccccacc cgcttcggca tagcgttctg gaccgcgcgc aaggacggcg ccgtgctgct
     2161 gcgccgccgc ccgccgcagg gcctgctcgg cggcatgatg gaagtgccct cgaccgaatg
     2221 gacacccgac gcccaggacc tggacgccgc cgccgcccag gcgccactga cggcgcaatg
     2281 gcggctgctg ccggggctgg tccgccacac cttcacccac ttccatctgg aattgagggt
     2341 tgcggcggga aaggctggac cgaacccggt cgcgcgcggt atctggtgcc cgttggatca
     2401 attgggcgac cacgcgctgc cgacggtgat gcgcaaggtg atcaggcacg ccctgtccaa
     2461 ggcctattga aaggaacgat gatgcgcaag ttggtggtgt ccgccctggt cctggcttcc
     2521 gtcgccctgt cggctccggc cggtgccgcc gaccccaagc ccaaggccgg cgccaagcag
     2581 cagcaccccc aggccgaggt cctgctgatg ctgccgccca agggctggca ggcggtgccg
     2641 gggcagaaga ccgatcagat gtcggtcacc cgcctgtacc cgccgggcca gagcgagaag
     2701 cagtggaccg aaatgatcac ggtgcagatc cagcccggca gcgacatgcc gccgcgcgcc
     2761 tatctcgaca ccgtcgtcgc ctacagccgc gccaattgcg agatggtcgg ccccggcccc
     2821 gtcaccgagg cgccgatcaa caactacccc tcggcctcgg gcatggtcca atgcaccaag
     2881 ggcaagcaat cgggccaagg caacgtggtg atggtgaccg ccatcaaggg ccgcgacggc
     2941 ctgtacgtgg tccagcgcca gtggcgcggc aagcccttca cccccgagca gaagcccgat
     3001 atctccgagg cgacgctgaa aagctggacc gccttcgccc gcaccatcgg cctgtgcgac
     3061 ccgcgcgacg ccaagaacca tccctgcccg tagctacttg cagatcgtca ccccggtggc
     3121 ggggttggaa tggcagaaca ccttcttgtt gccgaccttg cccaccgtgt tgccgtgacc
     3181 gtcggtgtgg gtgacgacct tgtccttgcc gatcttgccc accgtgccgg tgggggtgtt
     3241 cttgaggatc accgtctcgc cgtccacctt gcccacggtc tgaccggaac cc
//
LOCUS       DATIKR010000275         3157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40879, whole genome shotgun sequence.
ACCESSION   DATIKR010000275 DATIKR010000000
VERSION     DATIKR010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3157
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40879"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..600
                     /locus_tag="VLL76_04260"
     CDS             124..600
                     /locus_tag="VLL76_04260"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV28742.1"
                     /translation="MPVDLIPAALVHAELLAGMHKVCFAEPWSAASMTEILAMPGAAG
                     LIAVAEGSLTPSLGGPGPAGLVLWRSAAGEAEILTIAVLPPWRRAGLGGRLLDAALAG
                     AARDGAEAMFLEAAAGNRAALALYEGRGFAAVGRRRGYYGDDDAVVMRRELLLAHD"
     gene            complement(580..828)
                     /locus_tag="VLL76_04265"
     CDS             complement(580..828)
                     /locus_tag="VLL76_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HSV28743.1"
                     /translation="MTANTDYNLDITAEVCPMTFVRTKLLVERMTPGQVVEIRLKGKE
                     PLANVPRSLAELGHEILGCCAEAGEGAEGIHRLVVRKK"
     gene            929..1354
                     /locus_tag="VLL76_04270"
     CDS             929..1354
                     /locus_tag="VLL76_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HSV28744.1"
                     /translation="MSERSNNSDLLSLTTEIVAAHVANNTISVSDLPQLINEVYRTLA
                     SVGTTPAQPERPQPAVPVKKSVTPEYIICLEDGKKLKMLKRHLKTAYNMTPEEYRDRW
                     GLPADYPMVAPNYAQHRSTLAKKIGLGTKPRKRPGKRAG"
     gene            1459..1890
                     /locus_tag="VLL76_04275"
     CDS             1459..1890
                     /locus_tag="VLL76_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HSV28745.1"
                     /translation="MVSRIEQRCIEKGMKMTDQRRVIARVLSEADDHPDVEEVYRRST
                     QIDPKISIATVYRTVRLFEEADILERHDFGDGRARYEESPNEHHDHLIDMQSGRVIEF
                     TSTEIEALQREIARKYGYRLVGHRLELYGVPLTSGDNPEKK"
     gene            1931..2728
                     /locus_tag="VLL76_04280"
     CDS             1931..2728
                     /locus_tag="VLL76_04280"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HSV28746.1"
                     /translation="MNSAAEPQSLGLEVRLAASADEIAAAQALRYRVFYDEMGARPTP
                     EMAAARSDFDDFDTVCDHLLVIDPAKGKGGAGVVGTYRLIQRKVGEKFGRFYTAGEYD
                     IAKILDKGGNFMELGRSCIDTAYRNRSTMNLLWAGIANYVWDRGIDLMFGCASLPGTE
                     PDKLATQLAYLYHYHLAPDEICPRALPDLYVDMRLKAKDEIDPRRAVRELPPLVKGYL
                     MLGGFIGDGAVIDHQFNTTDVCVMVKTELVTDKYVKHYDRSRDVLSS"
     gene            2748..>3157
                     /locus_tag="VLL76_04285"
     CDS             2748..>3157
                     /locus_tag="VLL76_04285"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSV28747.1"
                     /translation="MINPVVAVLRLLSFALWTLLLMGPYLALMATGSRLAEGYRCFYF
                     RHVAAICGIRVRPEGAPRAAAGPVLYVANHASYIDIIVLGSLLRGAFVAKTEVAGWPG
                     FGFLAKIANTVFVDRKRGGTARERDLLRQRLDGGG"
BASE COUNT          529 a         1078 c         1019 g          531 t
ORIGIN      
        1 ggcggccgcc gccttgcccg acgccgcgat ggtcgcggcc ctggcggcgc aacgctggca
       61 agccggcacc gcgctgccgc ccgagccgct ttacctgcgc gacgccgacg tgacgatgcc
      121 ggcatgcccg tcgatctgat ccccgccgcc ctggtccacg ccgaattgct ggcgggcatg
      181 cacaaggtgt gcttcgccga gccgtggtcg gccgcgtcca tgaccgagat cctggccatg
      241 cccggtgccg ccggcctgat cgctgtggcc gagggctcgc tgacccccag cctgggcggt
      301 cccggcccgg ccgggctggt gctgtggcgc agcgccgccg gcgaggccga aatcctgacc
      361 atcgcggtgc tgccgccgtg gcgccgcgcc ggcctgggcg ggcgcctgct cgacgccgcc
      421 ctggcggggg cggcccgcga cggcgccgaa gccatgttcc tcgaggccgc cgccggcaac
      481 cgggcggcgc tggcgcttta cgagggccga ggcttcgcgg cggtggggcg gcgcaggggc
      541 tattacggcg acgacgatgc cgtcgtcatg cgtcgcgaat tacttcttgc gcacgactag
      601 ccggtggatg ccctcggcgc cctcgccggc ctcggcgcaa cagcccagga tttcatggcc
      661 tagttccgcc agcgaacgcg ggacattggc caaaggttcc tttcctttca gtcgaatttc
      721 cacgacctgt cccggggtca tgcgctccac cagcaacttg gtgcggacga acgtcatcgg
      781 acacacctca gcggtgatgt ctaggttgta gtctgtgttg gcagtcatgc gttcctcgac
      841 actttccatt tggcgtattg gttattgcaa ggccacgaca aaagatttat atagcgcggc
      901 attagacgta attggaggcc tgctctaaat gtcggagcgt tcgaacaaca gcgacctgtt
      961 gagcttgacc acggaaatcg tggccgccca tgtcgccaac aacaccatct cggtcagcga
     1021 cctgccccag ctgattaacg aggtctatcg caccctggcg tcggtcggca ccaccccggc
     1081 ccagcccgag cggccccagc cggcggtccc cgtcaagaag tcggtgaccc ccgagtacat
     1141 catttgtctc gaggacggca agaagctgaa gatgctgaag cgccacctca agaccgccta
     1201 caacatgact ccggaagaat accgcgatcg ttggggcctg ccggccgact atcccatggt
     1261 cgcccccaat tacgcgcagc accgctcgac cctggccaag aagatcggcc tgggcaccaa
     1321 gccgcgcaag cgccccggca agcgggctgg ctgatctcga tttctgggta gtgacgccaa
     1381 cggcgccgcg tgcggtctta cgcacgcggc gccttttggt ttatagttcg ccccgatcgc
     1441 catagacacg gatcgaccat ggtttcgcgt atcgagcagc gctgcatcga gaagggcatg
     1501 aagatgaccg accagcgtcg ggtcatcgcg cgcgtcctgt ccgaggccga cgaccatccc
     1561 gacgtggagg aggtctatcg ccgctccacc cagatcgatc ccaagatctc gatcgccacc
     1621 gtctaccgca cggtgcgcct gttcgaggag gcggacatcc tggagcgcca cgatttcggc
     1681 gacggccgcg cgcgttacga ggaatccccc aacgaacacc acgaccacct gatcgacatg
     1741 cagtcgggcc gggtgatcga gttcacgagc accgagatcg aggcgttgca gcgggaaatc
     1801 gcccgcaaat acggctatcg tctggtcggc catcgacttg agctctatgg agttccgttg
     1861 acttctgggg acaatccgga aaagaagtga ggccggggcc cgacgggcca aggggacgac
     1921 gagggggccg atgaattccg cagccgaacc acagagcctg ggtcttgagg tccgactggc
     1981 cgcaagcgcc gacgagatcg cggcggcgca ggcgctgcgc tatcgggtgt tctacgacga
     2041 gatgggcgcc cggccgactc cggaaatggc cgccgcccgc tcggatttcg acgatttcga
     2101 caccgtctgc gaccacctgc tggtgatcga cccggccaag ggcaagggcg gcgccggcgt
     2161 ggtcggcacc taccgcctga tccagcgcaa ggtgggcgaa aagttcggcc gcttctacac
     2221 cgccggcgaa tacgacatcg ccaagatcct ggacaagggc ggcaacttca tggagctggg
     2281 gcggtcgtgc atcgacaccg cctaccgcaa ccgctcgacc atgaacctgc tgtgggccgg
     2341 catcgccaat tatgtgtggg accgcggcat cgacctgatg ttcggctgcg cctcgctgcc
     2401 cggcaccgag ccggacaagc tggcgaccca gttggcctat ctctaccact accacctggc
     2461 gccggacgag atctgcccgc gcgcgctgcc cgacctctat gtcgacatgc gcctgaaggc
     2521 caaggacgag atcgatccgc gccgcgccgt gcgcgagctg ccgccgctgg tcaagggcta
     2581 cctgatgctg ggcggcttca tcggcgacgg cgccgtgatc gaccaccagt tcaacaccac
     2641 cgacgtgtgc gtgatggtca agaccgagct ggtgaccgac aaatacgtca agcattacga
     2701 ccgttcccgc gacgtcctgt cgtcgtgacc cttcggagag ccggccgatg atcaatcccg
     2761 tcgtcgccgt gcttcggctg ctgagctttg cgttgtggac gctgctgctg atgggtccct
     2821 atctggcgct gatggccacg gggtcgcgcc tggccgaggg ctatcgctgc ttctacttcc
     2881 gccacgtcgc cgccatctgc ggcatccgcg tccggcccga gggcgcgccc agggccgctg
     2941 ccggcccggt gctgtacgtc gccaaccacg ccagctacat cgacatcatc gtgctgggca
     3001 gcctgttgcg gggcgccttc gtcgccaaga ccgaggtcgc cggctggccg ggtttcggct
     3061 ttttggccaa gatcgccaac accgtcttcg tcgatcgcaa gcgcggcggc acggcgcgcg
     3121 aacgcgacct gctgcggcag cgcctcgacg gcggcgg
//
LOCUS       DATIKR010000276         3718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_234062, whole genome shotgun sequence.
ACCESSION   DATIKR010000276 DATIKR010000000
VERSION     DATIKR010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3718
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234062"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..1362
                     /locus_tag="VLL76_04290"
     CDS             37..1362
                     /locus_tag="VLL76_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSV28748.1"
                     /translation="MSRPLFAALIGLVLLAVAPARAVTVEKVVSPGGIEAWLVQDHSN
                     PIIAMEVSFQGGASVEPAAKAGLANMVSGLLDEGAGPFDSQTFQGKLEDLAIGLSFDA
                     GKDSFRGHLKTLTDNRDTAFDLFRLALSQPRFDKEPVERIRGQIQAMLKRELQDPNSV
                     AAREWFRLAFAGHPYASPVRGNPETVKAITVADLRDWTKKHIARDTMIVGVVGDIAPA
                     ELGQLLDKTFGALPAKAAPIAVEGTTPKAPGKVAVIERNNPQSVAVFGEGGIKRDDPD
                     WYAAYVMNYILGGGGFSSRLTEQVREKRGLAYSVYSYLQPFDRAGIIFGGVATENARL
                     AESLALIREEWRRMREEGPTEKELADAKTYLTGSFPLSLDSTASIAGLLVAMQEDKLG
                     IDYLDKRNSYIEAVSLDHVKKVAARLLDPDRLTVVVVGKPDGVQASAVQ"
     gene            complement(1667..2911)
                     /gene="nrfD"
                     /locus_tag="VLL76_04295"
     CDS             complement(1667..2911)
                     /gene="nrfD"
                     /locus_tag="VLL76_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011629404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HSV28749.1"
                     /translation="MKKLDYRELTPMTTGWLTAVGALLAVIAVAMGAVYYMEHNGHWV
                     TGMTNQVVWGMPHVFAIFLIVAASGALNIASIGSVFGREPYQPLGRLSGVMAISLLAG
                     GLAVLVLDLGRPDRLIVAMTHYNFKSIFAWNVILYNGFFAIVGVYLWTMMDWKMKRFY
                     KPAAIFAFLWRLILTTGTGSIFGFLLAREGYGSAVMAPLFIAMSFAFGLAVFLLVLMG
                     LYGASGRPLSNELVRMKGRLLGVFIAANLYFVAVQHVTNLYWADKHGVEAFILAGGNL
                     YTFLFWGVQVVLGGLVPLALVFQKGATRCMVRAASVLVVIGGLAQVYVIVIGGQAFPL
                     TLFPGMEVGSSFMDGSVAAYAPTLPEVLLGLGGFAIAVLLTVVVSTYLRVLPSSLGHG
                     DEAEAEVLHADPAIEAEVAPAE"
     gene            complement(2915..3643)
                     /locus_tag="VLL76_04300"
     CDS             complement(2915..3643)
                     /locus_tag="VLL76_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV28750.1"
                     /translation="MSHDTNRRDVLKAAAAVVTLAPGLTLVAPAAEARAPGTPASPAN
                     RWGLLIDTTKCDAGCDACVTACKTEMGLPGHDRPLTDAQYIRKVDVKDPASGASHSLP
                     VMCQHCAKPPCVDVCPTGASMKRADGIVLVDRHICIGCRYCMMACPYKARSFAHEDQS
                     GQKDHNPRGKGCVEACTLCAHRVDAGGQPACVEACNAKGKAAMLFGDLNDPNSEIAKR
                     IAKEATTRIRADLGVDPAIRYQGI"
BASE COUNT          656 a         1256 c         1247 g          559 t
ORIGIN      
        1 cgaagccaag cccgccgccg ccaaggagcc ccgccgatga gccgccccct gttcgccgcc
       61 ctaatcgggc tggtgctgct ggccgtggcg ccggctcggg ccgtcaccgt ggaaaaggtg
      121 gtcagccccg gcggcatcga ggcctggctg gtgcaggacc attccaaccc catcatcgcc
      181 atggaggtgt cgttccaggg cggcgcttcg gtcgaaccgg cggcgaaggc cggcctcgcc
      241 aacatggtgt ccggcctgct ggacgaaggc gccggcccgt tcgattccca gaccttccag
      301 ggcaagctgg aggacctcgc catcgggctg tcgttcgatg ccggcaagga cagctttcgc
      361 ggccatctca agaccctgac cgacaaccgc gacaccgcct tcgacctgtt ccgcctggcg
      421 ctgagccagc cgcgcttcga caaggagccg gtcgagcgca ttcgcggcca gatccaggcc
      481 atgctgaagc gcgagctgca ggaccccaat tcggtggcgg cgcgcgagtg gttccgcctg
      541 gccttcgccg gccatcccta tgccagcccg gtgcgcggca atcccgaaac ggtcaaggcc
      601 atcacggtgg ccgacctcag ggactggacc aagaagcaca tcgcccgcga caccatgatc
      661 gtcggcgtgg tcggcgacat cgccccggcc gaactggggc agttgctcga caagaccttc
      721 ggcgccctgc cggccaaggc cgcccccatc gccgtcgaag gcaccacgcc caaggcgccg
      781 ggcaaggtgg cggtgatcga acgcaacaac ccccaaagcg tcgccgtgtt cggcgaaggc
      841 ggcatcaagc gcgacgaccc cgactggtac gccgcctatg tgatgaacta catcctgggc
      901 ggcggcggct tttcgtcgcg gctgaccgag caggtgcgcg aaaagcgcgg cctggcctat
      961 tcggtctatt cctacctgca gccgttcgat cgcgccggca tcatcttcgg cggcgtcgcc
     1021 accgagaacg cccgcctggc cgaatcgctg gcgctgatcc gcgaggaatg gcggcgcatg
     1081 cgcgaagagg ggccgacgga aaaggaactg gccgacgcca agacctacct gaccggctcg
     1141 ttcccgctgt cgctggattc taccgcctcc atcgccggcc tgctggtggc aatgcaggaa
     1201 gacaagctgg gcatcgacta cctcgacaag cgcaattcct atatcgaagc ggtctcgctc
     1261 gaccacgtca agaaggtggc cgcccgcctg ctggatcccg acaggctgac cgtggtggtg
     1321 gtcggcaagc ccgacggggt gcaggcgagc gcggtgcagt agggactggg gattgcctgc
     1381 gcatggtcaa ggaacacgga agaggggacg gctgtccgtc gccattattc cgccattccc
     1441 gcactgcact gcgctggcac aaggaaaggc gtcatcccgg gcttgacccg ggatccagag
     1501 ccgcgtgtat ggacgcacga ggtgtccccc gaccttttcg tgactcctgg atcccgggtc
     1561 gcgcttcgct tgcccgggat gacggcggaa gcacgtaact ccgcgataaa cccccaaaaa
     1621 aaagggagag ccagtggctc tcccttattc tttcgtaggc agcggtttat tccgccggcg
     1681 ccacttccgc ttcgatggcg gggtcggcgt gcagcacttc cgcctcggcc tcgtcgccat
     1741 ggcccagcga cgacggcagc acccgcagat aggtggacac caccaccgtc agcagcaccg
     1801 cgatggcgaa accccccagg cccagcagga cttccggcag ggtcggcgca taggcggcga
     1861 cgctgccgtc catgaaggac gagccgacct ccatgcccgg gaacagggtc agcgggaacg
     1921 cctggccgcc gatgacgatg acgtagacct gggccaggcc gccgatcacc accagcacgc
     1981 tggcggcccg caccatgcag cgggtggcgc ccttctggaa caccagcgcc agcggcacga
     2041 ggccgcccag caccacctgc acaccccaga acaggaaggt gtagaggttg ccgccggcca
     2101 ggatgaaggc ttcgacgccg tgcttgtcgg cccagtacag attggtcacg tgctggaccg
     2161 ccacgaagta caggttggcg gcgatgaaca cgcccagcag gcggcccttc atgcgcacca
     2221 gctcgttgga cagcggccgg cccgacgcgc cgtacaggcc catcagcacc agcaggaaca
     2281 ccgccaggcc gaaggcgaag gacatggcga tgaacagcgg cgccatcacc gccgaaccgt
     2341 aaccctcgcg cgccagcagg aagccgaaga tcgagccggt accggtggtc aggatcaggc
     2401 gccacaggaa ggcgaagatg gccgccggct tgtagaaccg cttcatcttc cagtccatca
     2461 tcgtccacag gtagacgccg acgatggcga agaagccgtt atacaggatg acgttccacg
     2521 cgaagatgga tttgaaattg taatgggtca tggcgacgat caggcggtcg ggccgcccca
     2581 gatccagcac cagcacggcc agtccgccgg ccagcagcga gatcgccatc acgcccgaca
     2641 gccggcccag cggctgatag ggctcgcggc cgaacaccga accgatcgag gcgatgttga
     2701 gcgcgcccga cgcggccacg atcaggaaga tcgcgaacac gtgcggcatg ccccacacca
     2761 cctggttggt catgccggtg acccagtggc cgttgtgctc catgtagtag acggcgccca
     2821 tggcgacggc gatcaccgcc agcaacgcac cgacggcggt cagccagccg gtggtcatgg
     2881 gggtcagttc ccggtaatcc agcttcttca tggatcaaat cccctgatag cggatggccg
     2941 gatcgacacc cagatcggca cggatcctgg tggtcgcttc cttggcgata cgcttggcga
     3001 tttcgctgtt ggggtcgttg aggtcgccga acagcatggc cgccttgccc ttggcgttgc
     3061 aggcctcgac acaggcgggc tggccgccgg catcgacgcg gtgggcgcac agggtgcacg
     3121 cctcgacgca gcccttgccg cgcggattgt ggtccttctg gccgctctgg tcctcgtggg
     3181 cgaaggaccg cgccttgtag gggcaagcca tcatgcaata gcggcagccg atgcagatgt
     3241 ggcgatcgac cagcacgatg ccgtcggcgc gcttcatcga cgcgccggtg gggcagacgt
     3301 cgacgcaggg cggcttggcg caatgctggc acatcaccgg cagcgaatgg gacgcccccg
     3361 aggccgggtc cttgacgtcc accttgcgga tgtactgggc gtcggtcagc ggccggtcgt
     3421 ggccgggcag gcccatctcg gtcttgcagg cggtgacgca ggcgtcacag ccggcgtcgc
     3481 atttggtggt gtcgatcaac aggccccagc ggttggccgg gctggcgggc gtgccgggcg
     3541 cgcgggcctc ggcggccggc gccaccaggg tcagacccgg ggccagggtc acgacggcgg
     3601 cggcggcctt gagcacgtcg cggcggttgg tgtcgtggct cattcctcgc ggtcctttcg
     3661 tcagcggctt gccgtcttgc cgtcaccgcc gggggtggtg gcgtggcact ggaagcag
//
LOCUS       DATIKR010000277         2615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_161361, whole genome shotgun sequence.
ACCESSION   DATIKR010000277 DATIKR010000000
VERSION     DATIKR010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161361"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..839
                     /locus_tag="VLL76_04305"
     CDS             <1..839
                     /locus_tag="VLL76_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012523216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HSV28751.1"
                     /translation="SERADPIGDEAYSPVKGIVHRYPDRVLLKPIMVCPVYCRFCFRR
                     EMVGDADGTLTEAELSEALAYVSGAPAVREIVVTGGDPLMLQPNRLAAVVERVARIPH
                     VEVLRFHTRVPVADPGRVTQVLAAALRPPPEAGLAVWLAVHVNHPRELSPIARRALGT
                     LADAGLPLLSQTVLLKGVNDDASILEALFRALVRNRVRPYYLHHPDLARGTRHLRPTI
                     AEGRAIVKSLRGRLTGIAQPTYVLDIPGGAGKVPIGPEWWDGERGEVEDWKGRRHRYP
                     PG"
     gene            complement(836..1675)
                     /locus_tag="VLL76_04310"
     CDS             complement(836..1675)
                     /locus_tag="VLL76_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28752.1"
                     /translation="MKIAHWVAAVVIVATAAWLLDLSAGYRQDTPDDLGPWVKRQTIG
                     VYSVTLEQLADEPEQRLVVAKTGQKALEISSYRIYLREPEGSSVTGGRTPQLVASEWS
                     GGAHCCFTYHIIELGASPKIIQTIEGGHSDVKFRQLDGDPAIEIELTDWAFAYWPSSF
                     ADSPAPTVILDWDGKSYIPSADLMRNSAYATHRQSQPAGGTKTAIERAVDEALNLIYA
                     GQWQEAERVLDETLPKSEEGQNVRRDLYQCRLQGSRWWPFIAKLNGVPATPAAEHCDK
                     EKN"
     gene            1778..2341
                     /gene="efp"
                     /locus_tag="VLL76_04315"
     CDS             1778..2341
                     /gene="efp"
                     /locus_tag="VLL76_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HSV28753.1"
                     /translation="MKINANLIRPGNIIEHNGKQWAVLKTQIVQPGKGGAFITVEMRD
                     IRTGTKTNERWRTADTVEKCNVEGKECSFLFADGEALTFMDQESYEQFNIPNELLGES
                     AAFLQDGMIVEVDFIEGSPVSVALPEKVVMAIVEADPVVKGQTASSSYKPAKLENGLK
                     ILVPPFIEQGEKIVVATADCSYVERAK"
     gene            2428..>2615
                     /locus_tag="VLL76_04320"
     CDS             2428..>2615
                     /locus_tag="VLL76_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HSV28754.1"
                     /translation="MIVRSALLNVMMGAARKAGRGMVRDFGEVEKLQVSMKGTSDFVS
                     SADLKAEKTLRAELKKARP"
BASE COUNT          448 a          855 c          837 g          475 t
ORIGIN      
        1 ccagcgagcg ggccgacccc atcggcgacg aagcctacag ccccgtcaag ggcatcgtcc
       61 accgctaccc ggaccgcgtg ctgctgaaac cgatcatggt gtgcccggtc tattgccgct
      121 tctgcttccg ccgcgagatg gtgggcgatg ccgacggcac cctgaccgag gcggaattgt
      181 cggaagccct ggcctatgtg tcgggcgcgc cggcggtgcg cgagatcgtg gtgaccggcg
      241 gcgatccctt gatgctgcaa cccaaccggc tggcggcggt ggtggagcgg gtggcgcgca
      301 tcccccatgt cgaggtgctg cgcttccaca cccgcgtgcc ggttgccgac cccggccgcg
      361 tcacccaagt gctggcggcc gcgctgcgcc cgccgccgga agccgggttg gcggtgtggc
      421 tggcggtgca cgtcaaccac ccgcgcgaac tgtcgcccat cgcgcgccgt gccctcggca
      481 ccctggccga tgccggcctg ccactgctgt cgcagacggt gctgctgaag ggcgtcaacg
      541 acgacgcttc tatcttggag gcgctgttcc gcgccctggt gcgcaaccgc gtgcggccct
      601 attacctgca ccaccccgac ctggcgcgcg gcacgaggca tctgcgcccg accatcgccg
      661 agggccgcgc catcgtcaaa tccctgcgcg gccgcctgac cggcatcgcc cagccgacct
      721 atgtcctcga catccccggc ggcgccggca aggtgccgat cgggccggaa tggtgggatg
      781 gcgaaagggg cgaggtcgag gattggaagg ggcggcggca ccggtatccg ccgggttaat
      841 tcttttcctt gtcgcagtgt tccgcagccg gtgtagccgg cacaccgttg agcttggcaa
      901 tgaagggcca ccagcgactg ccttgcagcc tgcattgata gaggtcgcgc cgaacgttct
      961 gtccctcctc cgatttcggc agggtttcat cgagaacgcg ctcagcctcc tgccactgtc
     1021 ccgcgtagat cagattcaag gcctcgtcga cagcacgttc gatggccgtc tttgtgccgc
     1081 cggccggctg gctctgccgg tgggtggcgt aagccgagtt gcgcataagg tcagccgatg
     1141 ggatgtacga cttgccatcc caatcgagaa tgacggttgg agctggtgag tccgcgaaac
     1201 tggagggcca atacgcgaac gcccaatccg tcaattcgat ctcgatcgcg gggtcgccat
     1261 ccagttgacg aaacttgacg tctgaatgcc cgccttcaat cgtctggatg attttcggcg
     1321 aagctcccag ttcgatgatg tggtaggtaa agcagcaatg cgcgccgcct gaccattcgg
     1381 acgcgaccag ttgtggcgtt cggccaccgg tcacgctgct cccttctggc tcgcggagat
     1441 agatgcggta acttgagatc tccagtgctt tttgcccggt cttggcgacc accaagcgct
     1501 gctccggctc atccgccagt tgctccaggg tgacggagta gacgccaatc gtctgtcgct
     1561 tgacccatgg ccccaaatcg tcgggagtgt cctgccgata gccggccgac aggtccagca
     1621 gccaagccgc ggtcgcgacg atcaccacgg cagcgaccca atgtgcgatt ttcacggcat
     1681 cccccctatg aagatggcgg cggtacgccc cggttgccat attcccgcca acctgctagc
     1741 ttccgcgcca atttcccgca agctttcgga tttttccatg aagatcaacg cgaacctgat
     1801 ccgtcccggc aacatcatcg agcacaacgg caagcaatgg gccgttctca agacccagat
     1861 cgtgcagccg ggcaagggcg gcgcgttcat cacggtcgag atgcgcgaca tccgcaccgg
     1921 gaccaagacc aacgagcgtt ggcgcaccgc cgacaccgtc gagaagtgca acgtcgaggg
     1981 caaggaatgc tcgttcctgt tcgccgacgg cgaagcgctg accttcatgg accaggaaag
     2041 ctacgagcag ttcaacatcc ccaacgaact gttgggtgag tcggccgcct tcctgcagga
     2101 cggcatgatc gtcgaggtcg atttcatcga aggctcgccg gtttcggtgg cgctgccgga
     2161 aaaggtggtg atggccatcg tcgaggccga tccggtggtg aagggccaga ccgcgtcgtc
     2221 gtcctacaag ccggccaagc tggagaacgg cctgaagatc ctggtgccgc cgttcatcga
     2281 gcagggcgag aagatcgtgg tggcgaccgc cgattgttcc tacgtcgagc gcgccaagta
     2341 agctttcttt ccgtatatta gggggccgtc cgcccgggtt tcggcccagg ccgacggccc
     2401 cgtccgtttt tgacaggagt acccgccgtg atcgtccgtt ccgccctttt gaatgtcatg
     2461 atgggcgccg cccgcaaggc cggccgcggc atggtgcgcg acttcggcga ggtcgagaag
     2521 ctgcaggtgt ccatgaaggg cacgtcggac ttcgtgtcgt cggccgacct caaggccgag
     2581 aagacgctgc gcgccgaact caagaaggcc cgccc
//
LOCUS       DATIKR010000278         2249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_100894, whole genome shotgun sequence.
ACCESSION   DATIKR010000278 DATIKR010000000
VERSION     DATIKR010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100894"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1401
                     /locus_tag="VLL76_04325"
     CDS             76..1401
                     /locus_tag="VLL76_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit I"
                     /protein_id="HSV28755.1"
                     /translation="MSTTMETRPFPHLHATARAALRGWALLAVGALAVAGALALLLAL
                     SRTPGVQHWLPWGADFFHKGLVTHVVFSFQVWFLAMLGVLAALCGAGGMAGPAVATAG
                     AALLLVPTLAGWGEPSLNNYVPVLDHPLFLAGLALLAAGVAAGTTLLRPSLAPARFGT
                     ATAVVGLWAALACFALALMLIPPDTDRALHLERLFWGGGHVLQFVNTALLMVAWQALA
                     QAAFGRGALPPALARASFAALGLFTLAAPLLYRLDVLGLAHRQAFTQLLWYGLPLPPL
                     VMGLGVAWMLATRRRDWRSPAILSLALSLAVFGLGGGAGFFLGVADTRTPSHYHAVIG
                     GVNLALMGLMHVFALPALGRAARPGRWLTAQFHLYGGGQALHAAGFYIAGLAGVARKT
                     AGADQGLDSGLKLVSMGMVGLGAAVAVLGGVLFVATVLALLLKREDRHG"
     gene            1394..1858
                     /locus_tag="VLL76_04330"
     CDS             1394..1858
                     /locus_tag="VLL76_04330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit II"
                     /protein_id="HSV28756.1"
                     /translation="MAELLGKTPAERLAVILFAAVTLALLAALPAWRMSDAPAFAEET
                     PESFAARVEAFTAGQEVVTPPPGDVPLLAERFRFRPALRLKAGQTYRLHLSSIDGVHS
                     LAIDGREVLLVPGQVRVLTITPEAPGMLDIRCNEYCGLGHNKMRGTIEVVGE"
     gene            complement(1964..>2249)
                     /locus_tag="VLL76_04335"
     CDS             complement(1964..>2249)
                     /locus_tag="VLL76_04335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28757.1"
                     /translation="SDAPVASGDAPRRHKLSSSDRSMLTRAMAEEGYNCPRAKDVATC
                     GGRGDDMVLRIWCGPDDGSDDLTARMVYKVTFHKQYPTVRKWPGDPEECP"
BASE COUNT          246 a          780 c          817 g          406 t
ORIGIN      
        1 cccgccgctg ccgtcaatcc ggccacccgt ccagtcccaa ggtcctagga cttggcggcg
       61 tggctcatgc ggcccatgtc cacgaccatg gagaccaggc ctttcccgca cttgcacgcc
      121 accgcccgcg ccgccttgcg cggctgggcg ctgttggcgg tgggcgcgct ggcggtggcg
      181 ggagcgctgg ccctgctgct ggcgctgtcg cggacgccgg gggtgcagca ctggctgcca
      241 tggggggccg acttctttca caagggcctg gtgacccacg tggtcttttc gttccaggtc
      301 tggttcctcg ccatgctggg cgtgctggcc gcgctgtgcg gcgccggcgg gatggccggc
      361 ccggccgtcg ccacggcggg cgccgcgctg ctgctggtgc ccaccctggc cggctggggc
      421 gagccgtcgc tgaacaatta cgtgccggtg ctggaccacc cgctgttcct ggccgggctg
      481 gccctcctgg cggcaggcgt cgcggccggc acgaccctgt tgcggccctc tttggcgccg
      541 gcccgcttcg gcaccgcgac ggcggtcgtc gggttatggg cggccctggc gtgctttgcc
      601 ctggccctga tgctgatccc accggacacc gaccgcgcgc tgcaccttga gcggctgttc
      661 tggggcggcg gccacgtgct gcaattcgtc aacaccgcgc tgctgatggt ggcgtggcag
      721 gcgttggccc aggccgcctt cggacgcggt gccttgccgc ctgccctggc gcgggcgtcg
      781 ttcgcggccc tgggcctgtt caccctggcc gcccccctgc tctatcgcct ggatgtcctt
      841 gggctggcgc accgccaggc cttcacccag ttgctgtggt acggcctgcc gctgccgccg
      901 ctggtcatgg ggctgggcgt ggcgtggatg ctggcgacgc gacggcgcga ctggcgctcg
      961 cccgccatcc tgtcgctggc cctgtcgctg gcggtgttcg ggctgggcgg cggcgccggc
     1021 ttcttcctgg gcgtggccga cacccgcacg ccgtcgcatt accacgccgt gatcggcggc
     1081 gtgaacctgg cgttgatggg gctgatgcac gtcttcgcgc tgcccgcctt gggccgggcg
     1141 gcacggccgg ggcgttggct gacggcccag ttccacctgt atggcggcgg ccaggcgctg
     1201 catgccgccg gcttctacat cgccggcctg gcgggtgtgg cgcgcaagac cgccggagcc
     1261 gaccagggcc tggacagcgg cctcaagctg gtgtccatgg gcatggtcgg gctgggcgcc
     1321 gccgtggcgg tgctgggcgg cgtgctgttc gttgcgacgg tcctggcgct gctgctgaag
     1381 cgggaggacc ggcatggctg agctgctggg aaaaacgccg gccgaacgcc tcgccgtcat
     1441 cctgttcgcg gcggtgacgc tggcgctgct ggcggccctg ccggcgtggc gaatgtcgga
     1501 cgcgcccgcg ttcgcggaag aaacccctga atccttcgct gcccgcgtcg aagccttcac
     1561 cgccggccag gaggtggtca ccccgccgcc cggcgacgtg ccgctgctgg ccgaacgctt
     1621 ccgcttccgc ccggcccttc gcctgaaggc gggccagacc taccgcctgc acctgtcgag
     1681 catcgacggc gtccattccc tggccatcga cggtcgcgag gtcttgctgg taccgggaca
     1741 agtgcgcgtg ctgaccatca ccccggaagc gcccggaatg ctggacatcc gctgcaacga
     1801 atattgcggc ctgggccaca acaagatgcg ggggacgatc gaggtggtgg gagagtaatg
     1861 gcctaagtgg cagccgtctg tgcctgaaag atgctttcgc cctgggagtt tgtcatcctg
     1921 aggcgaagcc gaaggatctt tcagcctcgg ttgccgctcc cgttcacgga cattcctccg
     1981 ggtcgcccgg ccacttgcga accgtgggat attgtttgtg gaaggtgacc ttgtagacca
     2041 tgcgggcagt caggtcgtcg cttccgtcgt cggggccgca ccagatgcgc agcaccatgt
     2101 cgtcgccgcg gccgccgcag gtggcgacgt ccttggcgcg ggggcagttg tagccctctt
     2161 ccgccatggc gcgggtcagc atgctccggt cggaggaact cagtttatgg cgccggggcg
     2221 catcgcccga ggcgaccggt gcgtcgctt
//
LOCUS       DATIKR010000279         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_100903, whole genome shotgun sequence.
ACCESSION   DATIKR010000279 DATIKR010000000
VERSION     DATIKR010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100903"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..1409)
                     /locus_tag="VLL76_04340"
     CDS             complement(102..1409)
                     /locus_tag="VLL76_04340"
                     /inference="COORDINATES: protein motif:HMM:NF017437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV28758.1"
                     /translation="MYKEFFNFSAEPFRVTPDPGFLYLTDQHKEALAAIIYGIAKRKG
                     FVCITGEVGVGKTTILRSYLDSVDEPGLRFVYIFNPNVSFQALLKHILKELSVPYGGD
                     DIAGMVETLKAWLVDHHSRRETLVLLIDEAQNMPIGTLESLRMLSNLETATEKLVQIV
                     LVGQPELEQLLAERQLRQLESRIAVRTRLGPLSKADSANYIRHRLKCVALGDQPAFSD
                     GAIKEIVACAGGIPRRINVVADNALMNAFGHKVKPVSAKIVREVVRDLRVKDSSAMPR
                     FVLPWRRLAWAGGVVLAGAAILTFGYTLTGGERTTVATATTKPSVPTVVSQPLPAIPH
                     KPVEILPALAEPVPPVAPAIQVETPVPVSLPALEPPPEKKRVLRIVAPGDTLAGLSFE
                     VYGRMDGRILDWVKTHNAEITDVDRIHVGQVIEFPVFTDKGRP"
     gene            complement(1415..>2021)
                     /locus_tag="VLL76_04345"
     CDS             complement(1415..>2021)
                     /locus_tag="VLL76_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28759.1"
                     /translation="ERTRVVDEARAKLFELQTKEQELLGKYHEGSVFVQRVQGERRKV
                     QSLLDQMLTTSDTRVTQGTNQVHQEIEKELFRAEAGLTTARSRSKTLARQLADIDRRL
                     ETINGAERLEAAARAAETALGDHKGSAVDAIGVVQAAAAGSRPVGPGRAGIVAIAAAI
                     GAVLAVALAALAQRLSSRFSTPADVERRLGLPVLTTIPRES"
BASE COUNT          300 a          691 c          701 g          329 t
ORIGIN      
        1 ggcggccgac accgcgccgg gcagccgccc cgcctcggcg ggcagtccgc ccgccgccgg
       61 caccaccgcc cgcgcccgct cgatggcgtc gaagtaacgg ctcatggccg ccccttgtcg
      121 gtgaacaccg ggaactcgat cacctggccg acatggatgc ggtcgacgtc ggtgatctcg
      181 gcattgtgcg tcttgaccca gtcgaggatg cgcccgtcca tgcggccgta gacctcgaag
      241 ctcaagcccg ccagggtgtc gcccggtgcc acgatgcgca gtacccgctt cttctcgggc
      301 ggcggttcca gggccggcaa actcaccggc accggcgttt ccacctggat ggccggcgcc
      361 accggcggca ccggctcggc cagggccggc aggatctcga ccggcttatg cgggatggcg
      421 ggcagcggct gcgacaccac cgtcggcacg gatggcttgg tggtggcggt cgccaccgtc
      481 gtgcgctcgc cgccggtcag ggtgtagccg aaggtcagga tcgccgcccc cgccagcact
      541 acgccgccag cccaggccag ccgccgccat ggcagcacga agcgcggcat ggcagagctg
      601 tccttgaccc gcaggtcgcg caccacctcg cgcacgatct tggcgctgac cggcttgacc
      661 ttgtggccga aggcgttcat cagcgcgttg tcggcgacga cattgatgcg gcgggggatg
      721 ccgccggcgc aagcgacgat ctccttgatg gcgccatccg agaaggccgg ctgatcgccc
      781 agggccacgc atttcaggcg atggcggatg taattggctg aatccgcctt ggacagcggc
      841 cccagccggg tccgcaccgc gatgcgcgac tccaattggc gcaactgccg ttcggccagc
      901 aattgctcca gttccggctg gccgaccagc acgatctgca ccagcttttc cgtcgcggtc
      961 tccaggttcg acagcatgcg cagcgattcc agcgtgccga tcggcatgtt ctgcgcttcg
     1021 tcgatcagca gcaccaaggt ctcgcggcgg gaatggtggt cgaccagcca ggccttcagg
     1081 gtctcgacca tgccggcaat gtcgtcgccc ccatagggca cgctcaattc cttgaggatg
     1141 tgcttgagca gcgcctggaa cgagacgttg gggttgaaga tgtagacgaa gcgcaggccc
     1201 ggttcgtcga cgctgtcgag atacgagcgc aggatggtgg tcttgcccac ccccacctcg
     1261 ccggtgatgc agacgaagcc cttgcgcttg gcgatgccgt agatgatggc ggccaacgcc
     1321 tccttgtgct ggtcggtgag gtagaggaac cccgggtccg gcgtgacgcg gaatggctcg
     1381 gccgagaagt tgaagaactc cttgtacatg gctgtcagct ctcgcgtggg atggtggtga
     1441 ggacgggaag gcccagacgc cgttcaacgt cggccggggt cgagaaacgg gacgacaggc
     1501 gctgggccag ggcggccagg gccacggcca gcaccgcgcc gatggcggcg gcgatggcga
     1561 cgatgccggc gcggcccggc cccaccgggc gcgagccggc ggcggcggcc tggaccacgc
     1621 cgatggcgtc cacggcactg cccttgtggt cacccaaggc agtctcggcg gcgcgcgcgg
     1681 cggcctccaa ccgttcggcg ccgttgatgg tttccaggcg gcggtcgatg tcggccaatt
     1741 gccgcgccag ggtcttggac cgcgaccggg cggtggtcag ccccgcctcg gcccggaaca
     1801 attccttctc gatctcctgg tgcacctggt tggtgccctg ggtgacgcgg gtgtccgagg
     1861 tggtcagcat ctggtccagc agcgactgca ccttgcggcg ctcgccctgg acccgctgca
     1921 cgaacacgct gccctcgtgg tacttgccca gcagttcctg ttccttggtc tgcagctcga
     1981 acagcttggc ccgggcctcg tcgaccacgc gggtgcgctc g
//
LOCUS       DATIKR010000280         3031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40955, whole genome shotgun sequence.
ACCESSION   DATIKR010000280 DATIKR010000000
VERSION     DATIKR010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40955"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..916
                     /gene="htpX"
                     /locus_tag="VLL76_04350"
     CDS             62..916
                     /gene="htpX"
                     /locus_tag="VLL76_04350"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF002363.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HSV28760.1"
                     /translation="MALGMNAFAYWNSDKMVLSMYGATQVDRHSAPGLFAIVERLAAR
                     AGMPMPKVFIIDSDQPNAFATGRSPEHASVAATTGLLDRLSPEEVEGVMAHELAHVMN
                     RDTLIMTITATFAGAIGMIANMFAFSSMFGGNRDEEEGGGGLGMLGGIAMMILAPLAA
                     SLVQMAISRTREYAADAEGARICGNPLWLASALERLEQAAHAIPNMAAERNPGTAHLF
                     IVNPLSGQGADNLFSTHPSMGNRVAALREMAAGMGMTWDVRATASVSPIPPTGPWQGG
                     GKAKGPWG"
     gene            953..2257
                     /locus_tag="VLL76_04355"
     CDS             953..2257
                     /locus_tag="VLL76_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HSV28761.1"
                     /translation="MARSSASKPDPRTLALDIIEAILVKRRLLDDVFDSDPRLARLDD
                     RDRAFARALVATMLRRLGQIDDLIGRCLEKKLPAKARRAMDVLRLGVAQLVFLETPAH
                     AAIDTSVDLVKKTELAGFAKLINAVLRRIDREGRAWAEAQDAGRLNMPDWLWNSWAAT
                     YGADTARAIANATLIEAPVDITVAGDPAGWADKLEAEALPTGSLRRRGGGDVTKLPGF
                     SDGAWWVQDMAAALPARLLGDVAGKRVADLCAAPGGKALQLAVAGGNVTAVDRSARRL
                     RRFTENLARLKLTSEIVEADVAAWQPDAPFDRVLLDAPCSATGTLRRHPDGLRLKGPG
                     DVAALADQQAALLAAAARMVAPGGLLVYCVCSLEPEEGIAQVERLLASGAPFRRLPIT
                     ADEVGGLAELLTAQGDLRTLPCHLADKGGMDAFYAARLERLK"
     gene            2254..2796
                     /gene="gmhB"
                     /locus_tag="VLL76_04360"
     CDS             2254..2796
                     /gene="gmhB"
                     /locus_tag="VLL76_04360"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014260526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HSV28762.1"
                     /translation="MKRFVLIDRDGTINVEKNYLSDPDQLELLPGVAEALRMLQSMGL
                     GIAVITNQSGIARGYFGLDALARVHARLREILKAEGVAVDGIYICPHGPDDDCACRKP
                     LPGMVEQAMAEHGFDPKAAFMIGDKEADVGLGRGVGATTFLVRTGYGRKYEAATKADH
                     VVDDLLAAAHVIAAQVADKA"
     gene            2853..>3031
                     /locus_tag="VLL76_04365"
     CDS             2853..>3031
                     /locus_tag="VLL76_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005024970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSV28763.1"
                     /translation="MSHSTSVAVIGLGYVGLPLAVAIARHFPTVGFDIAQDRIDELHK
                     GFDRTGEVETARLRG"
BASE COUNT          438 a         1127 c         1019 g          447 t
ORIGIN      
        1 cctgttcctt gccgtcggct ggctggtcgg cggccagggc ggcatggtga tcgccttcct
       61 gatggccctg ggcatgaacg ccttcgccta ttggaattcc gacaagatgg tgctgtccat
      121 gtacggcgcc acccaggtgg accgccattc ggcgcccggc ctgttcgcca tcgtcgagcg
      181 cctggcggcc cgcgccggca tgccgatgcc caaggtcttc atcatcgatt ccgaccagcc
      241 caacgccttc gccaccggcc gcagccccga gcacgcctcg gtggccgcca ccaccggcct
      301 gctcgaccgc ctcagccccg aggaagtgga aggcgtgatg gcgcacgaac tggcgcacgt
      361 gatgaaccgc gacaccctga tcatgaccat caccgccacc ttcgccggcg ccatcggcat
      421 gatcgccaac atgttcgcct tctcgtcgat gttcggcggc aaccgcgacg aggaggaagg
      481 cggcggcggc ctgggcatgc tgggcggcat cgccatgatg atcctggcgc cgctggcggc
      541 cagcctggtg cagatggcga tttcgcgtac ccgcgaatac gccgccgacg ccgagggcgc
      601 ccgcatctgc ggcaacccgc tgtggctggc ctcggcgctg gagcggctgg agcaggcggc
      661 gcacgccatc cccaacatgg cggccgagcg caaccccggc acggcgcatc tgttcatcgt
      721 caacccgctg tcgggccagg gcgccgacaa tctgttctcg acccatccca gcatgggcaa
      781 ccgggtcgcg gcgctgcgcg aaatggccgc cggcatgggc atgacttggg acgtccgcgc
      841 caccgcttcc gtgtcgccca tcccgcccac cggcccgtgg cagggcggcg gcaaggccaa
      901 ggggccgtgg gggtgatgga ttacggcgct taaatgaggt aaagagcggg ccatggcccg
      961 ctcttccgct tccaagcccg acccccgcac cctcgccctc gacatcatcg aggcgatcct
     1021 ggtcaagcgc cgtctgctcg acgacgtgtt cgactccgac ccccgcctcg ccaggctcga
     1081 cgaccgcgac cgcgccttcg cccgcgccct ggtcgccaca atgctgcgcc ggttgggcca
     1141 gatcgacgac ctgatcgggc gctgcctcga aaagaagctg ccggccaagg cgcgccgcgc
     1201 catggacgtg ctgcgcctgg gcgtggcgca actggtgttc ctggagacgc ccgcccacgc
     1261 cgccatcgac acctcggtgg atctggtcaa gaagaccgaa ctggccggct tcgccaagct
     1321 gatcaacgcc gtgctgcgcc gcatcgaccg cgagggccgc gcctgggccg aggcccagga
     1381 tgccggccgc ctcaacatgc ccgactggct gtggaattcc tgggccgcca cctatggcgc
     1441 cgacaccgcc cgcgccatcg ccaacgccac cctgatcgag gcgccggtgg acatcacggt
     1501 ggcgggcgat cccgccggct gggccgacaa gctggaggcc gaggccctgc ccaccggcag
     1561 cctgcgccgc cggggtggcg gcgacgtcac caagctgccc ggcttctccg acggcgcctg
     1621 gtgggtccag gacatggccg ccgccctgcc ggcccgcctg ctgggcgacg tcgccggcaa
     1681 gcgcgtcgcc gatctgtgcg ccgctcccgg cggcaaggcg ctgcaattgg cggtggccgg
     1741 cggcaacgtc accgccgtgg accgctcggc ccgccgcctg cgccgcttca ccgagaacct
     1801 ggcccgcctc aagctgacct ccgagatcgt cgaggccgac gtcgccgcct ggcagcccga
     1861 cgccccgttc gaccgcgtgc tgctggatgc gccgtgctcg gccaccggca cgctcaggcg
     1921 ccatcccgac ggcctgcggc tcaagggacc gggcgacgtc gccgccctgg ccgaccagca
     1981 ggcggcgctg ctggccgccg ccgcccgcat ggtggcgccc ggcggcttgc tggtctattg
     2041 cgtgtgctcg ctggagccgg aagaggggat cgctcaggtc gagcgcctgc tggcctcggg
     2101 ggcgccgttc cgccgcctgc ccatcactgc cgacgaggtc ggcggcctgg ccgagcttct
     2161 gacggcccag ggcgacctgc gcaccttgcc ctgtcacctg gccgacaagg gcggcatgga
     2221 cgccttctac gccgcccgcc tggaaagact gaaatgaagc gtttcgtcct gatcgaccgc
     2281 gacggcacca tcaacgtcga gaagaactat ctgtccgatc ccgaccagtt ggaactgctg
     2341 ccgggtgtgg cggaggcgct gcgcatgctc cagagcatgg gcttgggcat cgcggtcatc
     2401 accaaccagt cgggcatcgc gcgcggctat ttcggcctcg acgccctggc tcgcgtgcac
     2461 gcccgcctgc gcgaaatcct gaaggccgag ggcgtggcgg tggacggcat ctacatctgc
     2521 ccgcacggcc ccgacgacga ttgcgcctgc cgcaagccgc tgcccggcat ggtcgagcag
     2581 gcgatggccg agcacggctt cgaccccaag gccgccttca tgatcggcga caaggaagcc
     2641 gacgtggggc tggggcgcgg cgtcggcgcc accaccttcc tggtccgcac cggctatggc
     2701 cgcaagtacg aggccgccac caaggccgac cacgtggtcg acgacctgct ggcggcggcc
     2761 catgtcattg ccgcgcaggt ggctgacaag gcttgacttt ccggggggtc cgcggcgaaa
     2821 gtcggcccac ctttgcaggg gtcttatcgg gtatgtctca cagcacctcc gtcgccgtca
     2881 tcggcctggg ctatgtcggc ctgccgctgg ccgtcgccat cgcgcgccac ttcccgaccg
     2941 tcggcttcga catcgcgcag gatcgcatcg acgagctgca caagggcttc gaccgcaccg
     3001 gcgaggtcga gacggcgcgg ctgcgcggca g
//
LOCUS       DATIKR010000281         4376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_161396, whole genome shotgun sequence.
ACCESSION   DATIKR010000281 DATIKR010000000
VERSION     DATIKR010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161396"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..717)
                     /locus_tag="VLL76_04370"
     CDS             complement(7..717)
                     /locus_tag="VLL76_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSV28764.1"
                     /translation="MSFRPKHAMVLAAGLGLRMRPITEHIPKPLVEVAGRTMLDRALD
                     HLDKACVTAFVVNTHWLADKVRAHLAHRSDIVISHEEELLETGGGVTKALPLLGDAPF
                     YVVNSDIIWTDGAQPALQRLAEAWDDSRMDALLLMQRTATAVGYDGAGDFFLDPNGVP
                     RRRKGAEVAPLLFSGVQILSPRLFEGAPTGKFSLNVLYDRALEDARLFGLVHDGRWYH
                     VGTPEALPEVDALLREEA"
     gene            complement(714..1712)
                     /locus_tag="VLL76_04375"
     CDS             complement(714..1712)
                     /locus_tag="VLL76_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015095617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HSV28765.1"
                     /translation="MTVSARDDLIQAFLARAGWGGADRAKLAGDASFRRYDRLVDGDR
                     RAVLMDAPPPKEDVRPFVRIAMHLQRLGYSAPQFLAVDMDNGLLLLEDLGDDTYTRLL
                     AAGHDEEALYALAMDVLADLHSQADAIPLGLAPYDDDRLLTEATLLTDWYYPAVTGRK
                     LDAAARAEYVALWQDAFPIARGVPDTLVLRDFHVDNLMLLPRDGLAACGLLDFQDAVA
                     GPLTYDTMSLLEDARRDIDPALIARMKERYLARLPGLDRAAFDASWAVMAAQRHAKVI
                     GIFTRLCKRDGKPIYLGHIPRVWRLLDAACAHPSLAGIKAWLDRHIPAEQRIVPTP"
     gene            complement(1709..2176)
                     /gene="tsaE"
                     /locus_tag="VLL76_04380"
     CDS             complement(1709..2176)
                     /gene="tsaE"
                     /locus_tag="VLL76_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HSV28766.1"
                     /translation="MSRTLTLALSDEAATRSLGERLAGLARAGDVVALHGDLGTGKST
                     LARAFVRALTDPDEEVPSPTFTLVQTYETAIGEVWHFDLYRLEKADDAYELGIEDAFT
                     DGICLIEWPDRLGRLMPRDRLDLALSAGVEATARTATLTSHGAWDDRIGELAP"
     gene            complement(2242..3192)
                     /locus_tag="VLL76_04385"
     CDS             complement(2242..3192)
                     /locus_tag="VLL76_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HSV28767.1"
                     /translation="MPPAPINFPCAADLARHVEAWRGWLEGEKRASRHTLDGYSRDLA
                     SFLAFLVQHQGAEPGLDALRDLQPTDFRAFLAARQAEGLARSSMARLMSTLRGFFKFL
                     DRNDVLHNPAIGAVKAPRPPRSLPKPLAAEEAMEALATAGELHDEPWLAARDVALFTL
                     LYGCGLRLGEALGLERRDAPRGDTMMVTGKGRKQRVVPVLPVVREAVADYLRQCPYPH
                     NPEGPLFVGARGGRLNPGVVQRQMRRLRLLLGLPDTATPHALRHSFATHLLAGGGDLR
                     TIQELLGHSSLSTTQRYTHVDAARLTAVYNDAHPRARVKA"
     gene            complement(3197..3904)
                     /locus_tag="VLL76_04390"
     CDS             complement(3197..3904)
                     /locus_tag="VLL76_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 family protein"
                     /protein_id="HSV28768.1"
                     /translation="MVRKRDDVAVVDTPLTEEQVAAFLRRHPDFLVRHPDLLMSLAPP
                     TRFHEDSGVIDLQAFMIAHQREELARIKGAAEHLIHTSRSNMSTQNRTHQAALVLLAA
                     DSMDALVQAIADDLPGILDVDAATLRIEESGKPLPALASVGRVPKGAVEKILGGNDRD
                     CALSQELPGDPALFGEAASLVKSSAVVRVSPGGKCPEGVLSLGSRHGRTFYSGQGTDL
                     LGFLARVLQSCVHRFVG"
     gene            4039..>4376
                     /locus_tag="VLL76_04395"
     CDS             4039..>4376
                     /locus_tag="VLL76_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HSV28769.1"
                     /translation="MLPLPLAGAYDYRVGPEPVRAGDFVAVPLGKREVVGVVWREGDG
                     GVPEGKLRSLGRKLDCRPLPEATRRFVDWVAAYTLAAPGAVLKMAMSVPAALEPAKDL
                     VACRVAAHLP"
BASE COUNT          669 a         1435 c         1631 g          641 t
ORIGIN      
        1 cgggtactat gcctcttccc gcagcagcgc gtccacttcc ggcagggctt cgggggtgcc
       61 gacgtggtac cagcggccgt cgtggaccaa gccgaacagg cgggcgtctt ccagggcgcg
      121 gtcgtagagg acgttcagcg agaacttgcc cgtgggcgcg ccctcgaaca ggcgggggct
      181 gaggatctgg acgcccgaga acaagagcgg cgccacctcg gcgcccttgc gccggcgcgg
      241 cacgccgttg gggtcgagga agaaatcgcc ggcgccgtca tagcccaccg ccgtggcggt
      301 gcgctgcatc agcagcagcg cgtccatgcg ggaatcgtcc cacgcctcgg ccagccgttg
      361 cagcgcgggc tgcgcgccat cggtccagat gatgtcggaa ttgaccacgt agaacggcgc
      421 gtcgcccagc agcggcagcg ccttggtcac gccgccgccg gtctccagca attcctcttc
      481 gtgcgagatc acgatgtcgg agcggtgggc cagatgggcg cgcaccttgt cggccagcca
      541 gtgggtgttg acgacgaagg cggtcacaca ggccttgtcc aggtggtcga gcgcccggtc
      601 gagcatggtg cggccggcga cctcgaccag cggcttggga atgtgctcgg tgatggggcg
      661 catgcgaagg cccaggccgg cggccaggac catggcgtgc ttgggacgga agctcatggc
      721 gtgggcacga ttctctgttc ggccggaatg tggcggtcga gccaggcctt gatgccggcc
      781 aggctgggat gggcgcaggc ggcgtccagc aagcgccaca cgcgcgggat gtgccccaga
      841 tagatgggct tgccgtcgcg cttgcacaat cgggtgaaga tgccgatcac cttggcatgg
      901 cgctgcgccg ccatcaccgc ccacgacgcg tcgaaggcgg cgcggtcgag gccgggcagg
      961 cgcgccagat agcgctcctt catgcgggcg atcagggccg ggtcgatgtc gcggcgggca
     1021 tcttccagca gcgacatggt gtcataggtg agcgggccgg ccacggcatc ctggaagtcg
     1081 agcaggccgc aggccgccag gccgtcgcgc ggcagcagca tcaaattgtc gacgtggaag
     1141 tcgcgcagca ccagggtgtc gggaacaccg cgcgcgatag ggaaggcatc ctgccacagc
     1201 gccacgtatt ccgcccgcgc cgccgcatcc agcttccggc cggtcaccgc cggataatac
     1261 cagtcggtca gcagcgtcgc ctcggtcagc aggcggtcgt cgtcataggg cgccaggccg
     1321 agcgggatgg cgtcggcctg ggaatgcagg tcggccagca cgtccatggc cagggcgtac
     1381 agcgcctcct cgtcatggcc ggcggcgagc aggcgggtat aggtgtcgtc gcccaggtct
     1441 tccagcagca gcaggccatt gtccatgtcc accgccagga attgcggcgc gctgtagccc
     1501 aagcgctgca ggtgcatggc gatgcgcacg aaggggcgca cgtcctcctt gggcggcggc
     1561 gcgtccatca gcacggcgcg gcggtcgccg tccaccaggc ggtcatagcg gcggaagctg
     1621 gcgtcgccgg ccagcttggc gcggtcggca ccgccccagc cggcacgggc caggaaggcc
     1681 tggatcaggt cgtcgcgcgc cgaaacggtc atggtgcaag ctctccgatg cggtcgtccc
     1741 acgcgccgtg ggaggtcagg gtggcggtgc gggcggtggc ctcgacgccg gccgacagcg
     1801 ccaaatcgag gcggtcgcgc ggcatcagcc ggcccaggcg gtcgggccat tcgatcaggc
     1861 agatgccgtc ggtgaaggcg tcctcgatgc ccagttcata agcgtcgtcg gccttctcca
     1921 ggcgatagag gtcgaaatgc cagacctcgc cgatggcggt ctcgtaggtc tgcaccaggg
     1981 tgaaggtggg gctgggcact tcctcgtcgg gatcggtcag cgcgcgcacg aaggcgcggg
     2041 ccagggtgct cttgccggtg cccaaatccc catgcagcgc cacgacgtcg cccgcccggg
     2101 caagcccggc cagccgttca cccagggaac gggtggcggc ttcgtcggac agggcaaggg
     2161 tcagcgtgcg gctcatggct taggctaata gccccgaagg gagagggctg caaataccca
     2221 aaagggaaag ccgcacaaac gtcacgcttt cacgcgcgcc cggggatggg cgtcgttgta
     2281 gacggcggtc aggcgggcgg cgtccacatg ggtgtagcgc tgggtggtgg acagcgagga
     2341 atggcccagc aattcctgga tggtgcgcag gtcgccgccg ccggccagca ggtgggtggc
     2401 gaaggaatgg cgcagcgcgt gcggcgtggc ggtgtcgggc aggcccagca gcaggcgcag
     2461 ccgccgcatc tgccgctgca ccacgccggg attgagccgg ccgccgcgcg cgcccacgaa
     2521 cagcggccct tccgggttgt ggggataggg gcattgccgc aggtaatcgg cgacggcctc
     2581 gcgcaccacc ggcagcaccg gcaccacgcg ctgcttgcgg cccttgccgg tgaccatcat
     2641 ggtgtcgccg cgcggcgcgt cgcgccgttc caaacccagc gcctcgccca ggcgcaaacc
     2701 gcagccgtac agcagggtga acagggcgac gtcgcgcgcc gccagccacg gctcgtcgtg
     2761 cagttcgccg gcggtcgcca gggcctccat cgcttcctcg gcggccaagg gcttgggcag
     2821 cgagcgcggc ggacgcggcg ccttgaccgc gccgatggcg gggttgtgca gcacgtcgtt
     2881 gcggtcgagg aacttgaaga agccgcgcag cgtgctcatc agccgcgcca tggacgaccg
     2941 cgccagccct tccgcctggc gggcggccag gaaggcgcgg aagtcggtgg gctgcaggtc
     3001 gcgcaaggcg tccagccccg gctcggcgcc ctggtgctgc accaggaagg ccaggaacga
     3061 ggcgaggtcg cgggaatagc cgtccagcgt atgccggctg gcccgcttct ccccctcgag
     3121 ccagccgcgc cacgcctcga cgtggcgggc gagatcggcg gcacagggga aattgatggg
     3181 cgcggggggc atcaccctac cccacgaagc gatggacgca gctttgcagg acgcgggcga
     3241 ggaagcccaa gaggtcggtg ccctggccgg aatagaaggt gcggccgtgg cgcgagccca
     3301 gcgacaacac gccttcgggg catttgccgc cggggctgac gcggaccacc gccgaggact
     3361 tgaccaggct ggcggcctcg ccgaacaggg ccgggtcgcc cggcagttcc tgcgacaggg
     3421 cgcagtcgcg atcattcccg cccaggatct tctcgaccgc gcccttgggc acgcggccga
     3481 cgctcgccag ggccggcagc ggcttgccgc tttcctcgat gcgcagggtg gcggcgtcca
     3541 cgtccaggat gccgggcagg tcgtcggcga tggcctggac caaggcgtcc atgctgtccg
     3601 ccgccagcag caccagcgcc gcctgatggg tgcggttctg ggtcgacatg ttggaccggc
     3661 tggtgtggat caggtgttcg gccgcaccct tgatgcgcgc caactcttcg cgctggtggg
     3721 cgatcatgaa ggcctgcagg tcgatgacgc cgctgtcctc gtggaagcgg gtgggcggcg
     3781 ccagcgacat cagcagatcg gggtggcgca ccaggaaatc gggatggcgc cgcaggaagg
     3841 cggccacctg ctcttcggtg agcggggtat cgacgacggc aacgtcgtcg cgcttgcgga
     3901 ccatcagaac ctcgttgttt ggtgtgccgc cgcaaatcgc cggctgtttc tcgttcggtc
     3961 tttggctaag tttagaccat gcattccgcg cccctcaact cccccactcc gtatgccccc
     4021 ggatcacggg tcgccgtgat gctgccactt ccgttggccg gtgcctacga ttatcgcgtc
     4081 gggcccgagc ccgtgcgcgc aggagacttc gtcgcggtgc cgttgggcaa gcgcgaagtg
     4141 gtgggagtgg tgtggcgcga aggggatggc ggcgtgccgg aaggcaagct gcgcagcctg
     4201 ggccgcaagc tggactgccg gccgctgccc gaggcgacgc gtagattcgt cgattgggtc
     4261 gcggcctata ccctggcggc gccgggggcg gtgctcaaga tggcgatgag cgtgccggcg
     4321 gcgctggagc cggccaagga tctggtggcc tgccgcgtcg ccgcccatct gcccga
//
LOCUS       DATIKR010000282         2977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_4426, whole genome shotgun sequence.
ACCESSION   DATIKR010000282 DATIKR010000000
VERSION     DATIKR010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4426"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2977
                     /locus_tag="VLL76_04400"
     CDS             <1..>2977
                     /locus_tag="VLL76_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28770.1"
                     /translation="NFPFGWADDPAKKGAEDIDRNGNGSFDLGDAIQFTRTDSWDDSV
                     PTGCKGAPFVLRGKATDCYDGLRNYNQVRPAVFDGGYAFNGIGTGTYIVEATVPPGYS
                     LVKEEDRNVDFGDEYKPAPNVLPPVCVGTMRDVPPTLSSPRADGEAAPFAGQRRPLCD
                     RKQVALSDGVNAAADFFLFTQVPIAGLAVGFVLDDLANEFDPTSPQFGEKYGPPWIPV
                     SVKDWSGREIARTYTDEWGKYNFLVPSTYTANLPMPTGMSPNMLILCMNDAGPIADPA
                     NPGQTMLDPHFNRKYSQFCYTFQFMPGTTTYLDTPVVPVAAFAGPDQYSVDCALPGGT
                     PQVHSVSGWQGGPYVTAENRTLTIVSRGKEQVPNPAYDGPGGSKPKTIERDYGFGGTP
                     GRVSVGGVALTNVTWNDGVITGEIGTGTVSGQLEIVRADGARSVDAVHVTVGNRNTVV
                     RHVQPSPNPLATPIQDAIDQASPGDLILVAPGRYEEMPIMWKPVQLQGWGAGSTIINA
                     VRHPGEKLEAWNAKLADIIASGQVTLLPGQKGFANDEAAILVLARDVAPRRGGFGAVH
                     NPRIDGFTISGSDNGGGIVVNGYAKALAISNNKIVGNYGVFGGGVRVGHPELVRELNN
                     GGLRVTDADNDNVAIHHNQISQNGAQGGAGGGVSVCTGAQNYRVTGNFVCGNFTQGQG
                     GGIGHLGLSNGGRIADNTVIFNQSFNQGQTVSGGGIFVGGIRNAAGQTDGSGDVAIEA
                     NTIIGNHAGAGDGGGIRIAHANGRDARGRGTNAHAIDLINNMIARNVAGLAGGGISLQ
                     DAVRVRIIHNTVAHNDSTATAGEAFTPGNPDQSNPQPAGIVSRGHSPELLALVGSDQP
                     RYSSPVLSRNIIYKNRSFAFVTTFDSADLPVYGLSPNIDAGEAEIYRDLGVLGTAAPA
                     TLAPSQSVLTDATGTNPSNRALDPSFKAGVFNGSRQSVGQVELKTSMAAQPAFDEGGN
                     FVDVKFGPLTLTDDYHLAAG"
BASE COUNT          519 a         1110 c          936 g          412 t
ORIGIN      
        1 aacttcccgt tcggctgggc cgacgatccc gccaagaagg gcgccgagga catcgatcgc
       61 aacggcaacg gcagcttcga cctgggtgac gcaatccagt tcacccgcac cgattcgtgg
      121 gacgacagcg tgccgaccgg atgcaagggc gcccccttcg tcctgcgcgg caaggcgacc
      181 gattgctatg acggcctgcg caactacaac caggtgcggc cggcggtgtt cgacggcggc
      241 tatgccttca acggcatcgg caccggcacc tacatcgtcg aggcgacggt gccgccgggc
      301 tattcgctgg tcaaggaaga ggaccgcaac gtcgatttcg gcgacgagta caagcccgcg
      361 ccgaacgtgc tgccgccggt ctgcgtcggc accatgcgcg acgttccgcc caccctgtcg
      421 tcgccgcgcg ccgatggaga agcggctccg ttcgccggcc agcgccgccc gctgtgcgac
      481 cgcaagcagg ttgccttgtc ggacggcgtc aacgcggccg ccgacttctt cctgttcacc
      541 caggtgccca tcgccggcct ggcggtcggc ttcgtgctcg acgacctcgc caacgagttc
      601 gacccgacct cgccgcaatt cggcgagaag tacgggccgc cgtggatccc ggtgtcggtc
      661 aaggattggt cgggccgcga gatcgcccgc acctacaccg acgaatgggg caagtacaat
      721 ttcctggtcc ccagcacgta caccgccaac ctgcccatgc ccaccggcat gtcgcccaac
      781 atgctgatcc tgtgcatgaa cgacgccggc cccatcgccg atccggccaa tcccggccag
      841 accatgctgg acccgcattt caacaggaaa tacagccagt tctgctacac cttccagttc
      901 atgccgggca ccaccaccta tctggacacc ccggtggtgc cggtggcggc gttcgccggc
      961 cccgaccagt acagcgtcga ttgcgcgctg cccggcggca ccccgcaggt gcattcggtc
     1021 agcggctggc agggcggccc ctacgtcacc gccgagaacc gcaccctgac catcgtgtcg
     1081 cgcggcaagg agcaggtgcc caacccggcc tatgacggcc ccggcgggtc caagcccaag
     1141 acaatcgagc gcgactacgg cttcggcggc acgccgggcc gggtctcggt gggtggcgtg
     1201 gcgttgacca acgtcacctg gaacgacggc gtcatcaccg gcgagatcgg caccggcacc
     1261 gtctcgggcc agctcgagat cgtgcgggcc gacggcgcgc gcagtgtcga tgccgtgcat
     1321 gtcacggtcg gcaaccgcaa caccgtcgtc cgccacgtcc agcccagccc gaaccccttg
     1381 gcgaccccca tccaggacgc catcgaccag gcttcgcccg gcgacctgat cctggtggcg
     1441 cccggccgct acgaggaaat gccgatcatg tggaaaccgg tccagcttca gggctggggc
     1501 gccggctcga ccatcatcaa cgccgtccgc catcccggcg agaagctgga ggcgtggaac
     1561 gccaagctcg ccgacatcat cgcctcgggg caggtcaccc tgctgccggg ccagaagggc
     1621 ttcgccaacg acgaggcggc catcctggtg ctcgcccgcg acgtggcgcc gcgtcgcggc
     1681 ggcttcggag cggttcacaa cccgcgtatc gacggcttca ccatcagcgg ctcagacaat
     1741 ggcggcggca tcgtcgtcaa cggctatgcc aaggcgctgg ccatcagcaa caacaagatc
     1801 gtcggcaatt acggcgtgtt cggcggcggc gtccgtgtcg gccatcccga gctggtgcgc
     1861 gagctcaaca acggcggcct gcgcgtgacg gacgccgaca acgacaacgt cgccatccac
     1921 cacaaccaga tcagccagaa cggcgcccag ggcggcgcgg gcggcggcgt gtcggtatgc
     1981 accggcgcgc agaactaccg cgtcaccggc aacttcgtgt gcggcaactt cacccaaggc
     2041 cagggcggcg gcatcggcca tctcggcctg tccaacggtg gccgcatcgc cgacaacacc
     2101 gtgatcttca accagtcctt caaccagggc cagacggtct cgggcggcgg catcttcgtc
     2161 ggcggcatcc gcaacgcggc cggccagacc gacggctcgg gcgacgtcgc catcgaggcc
     2221 aacaccatca tcggcaacca cgccggtgcg ggcgacggcg gtggcatccg catcgcccat
     2281 gccaacggcc gcgacgcccg cgggcggggg accaacgccc atgccatcga cctcatcaac
     2341 aacatgatcg cccgcaacgt ggccggcctg gccggcggcg gcatctcgct gcaggacgcc
     2401 gtgcgggtgc gcatcatcca caacacggtg gcccacaacg acagcaccgc cacggcgggc
     2461 gaggccttca cccccggcaa cccggaccag tccaacccgc agccggccgg catcgtatcg
     2521 cgtggccaca gccctgaact gctggcactg gtcggcagtg accagccgcg ctactcgagc
     2581 ccggttctca gccgcaacat catctacaag aaccggtcct tcgccttcgt caccaccttc
     2641 gacagcgccg atctgccggt ctacgggctg tcgcccaaca tcgacgccgg cgaggccgaa
     2701 atctaccgcg acctgggcgt gctggggacc gccgcgccgg cgacgctggc ccccagccag
     2761 tcggtgctga ccgacgccac cggcacgaac cccagcaacc gcgcgctcga tcccagcttc
     2821 aaggcgggcg tgttcaacgg ctcgcgccag tcggtgggcc aggtcgagct gaaaacctcg
     2881 atggcggccc agcccgcctt cgacgagggc ggcaacttcg tggacgtgaa gttcggcccg
     2941 ctgaccctga ccgacgacta ccacctcgcc gccggct
//
LOCUS       DATIKR010000283         3921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_52396, whole genome shotgun sequence.
ACCESSION   DATIKR010000283 DATIKR010000000
VERSION     DATIKR010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52396"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /gene="recA"
                     /locus_tag="VLL76_04405"
     CDS             <1..805
                     /gene="recA"
                     /locus_tag="VLL76_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HSV28771.1"
                     /translation="EAQKRGGTCAFVDAEHALDPSYARKLGVNLDDLLISQPDAGEQA
                     LEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSVS
                     KSKCIVIFINQIHMKIGVMFGNPETTTGGNALKFYASVRLEIRRVGSIKDRDEVVGNQ
                     TRVKVVKNKLAPPFKVVDFDVMYGEGVSKMGELIDLGTKAGMIEKSGAWFSYNSTRIG
                     QGRENAKQFLRDNPAMTAEIESAIRQNAGILSDALSGGPGDLDGAAVED"
     gene            965..1801
                     /locus_tag="VLL76_04410"
     CDS             965..1801
                     /locus_tag="VLL76_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28772.1"
                     /translation="MESQAEEPEVIPVLDNAPEPGRRCRNMVGVAIKAFVDLMQDSAS
                     DGKVSMDQARRIANAIMAASGPLADYYARTEGQCDAIAQLGMAERKRTDFFGRLITQP
                     FAHLLDDAETGIDRKRLPQFFAAIRMVLGDETHAALKARCVVLAEEHRMAQGLIDWEA
                     FYADPDADQVLEQVLFTMARSFKRFEPRKDWFMIVMNSNPTSVSLGQNVFTPKAAEDR
                     VVAEFTLAHMVTLFEALFAGFRPEAMSKARRNTFIARWGSDPDKVMGPLFIELAALKR
                     RA"
     gene            complement(1806..3482)
                     /locus_tag="VLL76_04415"
     CDS             complement(1806..3482)
                     /locus_tag="VLL76_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28773.1"
                     /translation="MSRNTSFEIQILQEKNWVVVEYSTDEGQAKAFADNLLNTGNHAA
                     VRVVRDYLRADGLHAETVVHEKKAAEKKTGDLSLAPITEAPVCRELADFYKAEARQTV
                     GRLCRKYLDEMGVTPTELLHSAAELKRFGDKDRLLFSAIDKVSTLQAQATGEPGKDRR
                     DFLSKMWDQVVLRVRDATGGKKPDSPKTVADVLKVKGDDFNRLVAMSARLLESRSYAG
                     KLDVLVGWSGEDGAAQVMGLIDCFVADIVVSAQMIQDLLGFQPNLASALCQLCDLAEG
                     KAVPAKYAPESFAALNNLFAAGRLPQAREVLLGRVARELGGTNPLSRSEPKLEYEMFH
                     RMAHRLVCHERMLGGPAMAEALVQRSSRVHNTGGSVAVPQALDLLLSALGDNALAVQY
                     LLALAGSPLGESMGGQLDALLDGRVRGAVTMNDWVPVRHAPPARMAALTNANRALREA
                     TTLSEESKAALASHVDEVLAKYLLEEGVIEKIDKPDDPLALRAIRLVKFCGSGVLIEG
                     KSLALARARVIDHLRQPQFEEKFLSSVGDPAKAEKHLREFHKLLLETGFR"
     gene            complement(3479..>3921)
                     /locus_tag="VLL76_04420"
     CDS             complement(3479..>3921)
                     /locus_tag="VLL76_04420"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28774.1"
                     /translation="ARAQYHLAVMHDRGANGRRDPKAAAQLYRRAAEQGDSRAQYDLA
                     QMYLAGEGVPRDEAEALKWFLASARRGSALARYNLGICYAKGRGCVADPVEAHAWLCL
                     AAASGHDKVADPARRGAAALAEALGPDGLAKSRKRQAALAEVAS"
BASE COUNT          627 a         1368 c         1294 g          632 t
ORIGIN      
        1 cgaggcccag aagcgcggcg gcacctgcgc cttcgtggac gccgagcatg ctctggaccc
       61 ctcctacgcc cgcaagctgg gcgtcaacct cgacgacctg ctgatcagcc agccggacgc
      121 cggcgagcag gcgctcgaga tcgccgacac cctggtgcgc tcgggggcgg tggacgtcct
      181 ggtggtcgat tcggtcgccg ccctggtgcc gcgcgccgaa ctggaaggcg agatgggcga
      241 cagccatgtc ggcctgcacg cccgcctgat gagccaggcg ctgcgcaagc tgaccggctc
      301 ggtgtctaag tccaagtgca tcgtcatctt catcaaccag atccacatga agatcggcgt
      361 gatgttcggc aaccccgaaa ccaccaccgg cggcaacgcg ctgaagttct atgcctcggt
      421 ccgcctcgag atccgccgcg tcggctcgat caaggaccgc gacgaggtgg tcggcaacca
      481 gacccgcgtc aaggtggtca agaacaagct ggcgccgccc ttcaaggtgg tcgacttcga
      541 cgtcatgtac ggcgagggcg tctcgaagat gggcgagctg atcgacctgg gcaccaaggc
      601 cggcatgatc gagaagtcgg gcgcctggtt ctcgtacaac tccacccgta tcggccaggg
      661 ccgcgagaac gccaagcagt tcctgcgcga caacccggcc atgaccgccg agatcgaatc
      721 ggccatccgc cagaacgccg gcatcctgtc ggacgcgctg tcgggcggac cgggcgacct
      781 ggacggcgcc gcggtcgagg actgacccgt cgccgagaca agcgaccaag ggcgcccgcg
      841 caagccggcg cccttttttc cttccgcccg ccatacgtac taaccgcaac tttcatcgtg
      901 cagattgcgc acagctttgt gctatcctgg ccagcattgg gttgggaaca aggggcgctc
      961 cgcaatggag tcgcaggcag aggagccgga ggtcattccg gttttggaca acgcgccgga
     1021 acccggcagg cgttgccgca acatggtcgg cgtggcgatc aaggccttcg tcgacctgat
     1081 gcaggattcg gcctcggacg gcaaggtttc catggatcag gcgcggcgca tcgccaacgc
     1141 catcatggcg gccagcggac cgctggccga ttactacgcc cgcaccgaag gccagtgcga
     1201 cgccatcgcc caattgggca tggccgaacg caagcgcacc gacttcttcg gccgcctgat
     1261 cacccagccc ttcgcccatc tgctcgacga tgccgaaacc ggcatcgacc gcaagcgcct
     1321 gccgcaattc ttcgccgcca tccgcatggt cctcggcgat gagacccacg ccgccctcaa
     1381 ggcccgttgc gtcgtcctgg ccgaggaaca ccgcatggcc cagggactga tcgactggga
     1441 ggctttttat gccgatcccg atgccgacca ggttctggag caggtgctgt tcaccatggc
     1501 gcggtcgttc aagcggttcg aaccgcgcaa ggactggttc atgatcgtca tgaactcgaa
     1561 ccccacctcg gtttcgctgg gccaaaacgt gttcacgccc aaagccgccg aggaccgggt
     1621 ggtcgccgag ttcaccctcg cccacatggt cacgctgttc gaggccttgt tcgccggctt
     1681 ccgccccgaa gccatgagca aggcccggcg caacaccttc atcgcccgct ggggcagcga
     1741 ccccgacaag gtcatggggc cgctgttcat cgaactggcg gcgctgaagc ggcgggcctg
     1801 accgctcagc ggaacccggt ttccagcagc agcttgtgga attcgcgcag gtgcttttcg
     1861 gccttggccg gatcgccgac gctggacagg aacttttcct cgaattgagg ctggcgcagg
     1921 tggtcgatga cgcgggcgcg cgccaaggcc agcgacttgc cttcgatcag cacgcccgag
     1981 ccgcagaact tgaccaggcg gatggcgcgc agcgccagcg ggtcgtcggg cttgtcgatc
     2041 ttctcgatga cgccttcctc cagcaggtac ttggccagca cctcgtccac gtgcgaggcc
     2101 agcgccgcct tgctttcctc gctcagcgtc gtcgcttcgc gcaaggcccg gttggcgttg
     2161 gtcagggccg ccatgcgggc gggcggcgcg tggcgcaccg ggacccagtc gttcatggtg
     2221 acggcgccgc gaacccggcc gtccagcagc gcgtcgagtt ggccgcccat gctctcgccc
     2281 agcggcgagc cggccagggc cagcagatac tgcaccgcca gcgcgttgtc gcccaacgcc
     2341 gacagcagca ggtccagcgc ctgcggcacc gcgaccgagc cgccggtgtt gtggacgcgc
     2401 gagctgcgct gcaccaacgc ctcggccatg gcgggaccgc ccagcatgcg ctcgtggcac
     2461 accagccggt gggccatgcg gtggaacatc tcgtattcca gcttgggctc gctgcgcgac
     2521 agcgggttgg tgccccccag ttcgcgcgcc acccggccca gcagcacctc gcgcgcctgc
     2581 ggcaggcggc cggcggcgaa caggttgttg agcgcggcga agctttccgg ggcgtatttg
     2641 gccggcaccg ccttgccctc ggccaggtcg cacaactggc acaaggccga cgccaggttg
     2701 ggctggaacc ccagcaagtc ctggatcatc tgggccgaga cgacgatgtc ggcgacgaag
     2761 caatcgatca ggcccatgac ctgcgccgcg ccgtcctcgc ccgaccagcc caccagcaca
     2821 tccagcttgc cggcatagga ccggctttcc agcagccgcg ccgacatggc gaccagccgg
     2881 ttgaagtcgt cgcccttgac cttcagcacg tcggccacgg tcttggggga atcgggcttc
     2941 ttgccgccgg tggcgtcgcg cacgcgcagc accacctggt cccacatctt gctcaggaag
     3001 tcgcggcggt ccttgcccgg ctcgccggtg gcctgggcct gcagcgtcga gaccttgtcg
     3061 atggccgaga acagcagccg gtccttgtcg ccgaagcgct tcagctcggc ggcggaatgc
     3121 agcagttcgg tgggggtgac gcccatctcg tcgagatact tgcggcacag ccggccaacc
     3181 gtctggcgcg cctcggcctt gtagaaatcg gccagttcgc ggcagaccgg cgcctcggtg
     3241 atgggcgcca gcgacaggtc gccggtcttc ttctcggcgg ccttcttctc atggaccacg
     3301 gtctcggcat gcaggccgtc ggcgcgcaga tagtcgcgca ccacccggac ggcggcatgg
     3361 ttgccggtgt tgagcaggtt gtcggcgaac gccttggcct ggccctcgtc ggtcgagtac
     3421 tcgacgacga cccagttctt ttcctgcagg atctggattt cgaacgaggt gttgcggctc
     3481 atgacgccac ctcggccaga gccgcctgcc gcttccgcga cttggccagc ccgtccggac
     3541 ccagggcttc ggccagggcg gcggcgccgc gccgggcggg atcggcgacc ttgtcatggc
     3601 ccgaggcggc ggccaggcac agccaggcat gggcctcgac cgggtcggcg acgcagccgc
     3661 gccccttggc gtagcagatg cccagattgt agcgcgccag ggcactgcca cggcgagccg
     3721 aggccaggaa ccatttcagc gcctcggcct cgtcgcgagg cacgccctcg ccggccagat
     3781 acatctgggc caagtcgtat tgcgcccggc tgtcgccttg ctcggcggcg cggcggtaca
     3841 gttgcgcggc ggccttggga tcgcgccggc cgttggcacc gcgatcatgc atcaccgcca
     3901 gatggtattg cgcccgggcg t
//
LOCUS       DATIKR010000284         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_234141, whole genome shotgun sequence.
ACCESSION   DATIKR010000284 DATIKR010000000
VERSION     DATIKR010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234141"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1620
                     /locus_tag="VLL76_04425"
     CDS             <1..1620
                     /locus_tag="VLL76_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV28775.1"
                     /translation="AIAEGLARRIVKAEVPEVLKGATIFSLDMGTLLAGTRYRGDFEE
                     RLKAVVTELENYDGAILFIDEIHTVIGAGATSGGSMDASNLLKPALASGSLRCIGSTT
                     YKEFRNHFEKDRALVRRFQKIDVNEPSVEDSVKILNGIKPYYESHHKVKYAPDAIRAA
                     VELAAKYITDRKLPDKAIDVIDEVGAARMLLPESKRRKTVTVKDVEEIVAKIARIPPK
                     SVSVNDMEALKNLNRDLKTLVFGQDQAIEALASAIKLARAGLREPEKPIGCYLFSGPT
                     GVGKTEVARQLARIMGIELTRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQ
                     HPHCVLLLDEIEKAHPDLFNILLQVMDHGRLTDHNGKIVDFRNVILIMTTNAGAADMA
                     KPAIGFGRTTREGDDAEAIQRMFSPEFRNRLDATIPFAGLSEEIVAQVVDKFVMQLET
                     QLGDRDVQIELTEAARGWLAKRGYDPQFGARPLARVIQEHIKKPLAEELLFGKLAKGG
                     VVKVDVGADGKLTFDISEGSGKDEKVVELVE"
BASE COUNT          349 a          570 c          560 g          260 t
ORIGIN      
        1 gccatcgccg agggcctggc gcgccgcatc gtcaaggccg aggtgcccga ggtgctgaag
       61 ggcgccacca tcttctcgct cgacatgggc acgctgctgg cgggcacccg ctatcgcggc
      121 gatttcgagg aacgcctgaa ggcggtggtg accgagctcg agaattacga cggcgccatc
      181 ctgttcatcg acgagatcca cacggtgatc ggcgccggcg cgacctcggg cggctccatg
      241 gatgcgtcga acctgctcaa gccggctttg gcctcgggca gcctgcgttg cattggctcg
      301 accacctaca aggaattccg caaccacttc gagaaggacc gcgccctggt gcggcgcttc
      361 cagaagatcg acgtcaacga gccctcggtc gaggattcgg tcaagatcct caacggcatc
      421 aagccgtatt acgagagcca tcacaaggtg aagtacgccc ccgacgccat ccgcgccgcg
      481 gtggagctgg cggccaagta catcaccgac cgtaagctgc ccgacaaggc gatcgacgtg
      541 atcgacgagg tcggcgccgc ccgcatgctg ctgcccgaat ccaagcgccg caagacggtg
      601 acggtgaagg acgtcgagga gatcgtggcc aagatcgccc gcattccccc gaaatccgtg
      661 tcggtcaacg acatggaggc gttgaagaac ctcaaccgcg acctcaagac gctggtgttc
      721 ggccaggacc aggccatcga ggcgctggcc agcgccatca agctggcccg cgccggcctg
      781 cgcgagccgg aaaagccgat cggctgctac ctgttcagcg gcccgaccgg cgtcggcaag
      841 accgaggtgg cgcggcagtt ggcccgcatc atgggcatcg agctgacccg cttcgacatg
      901 tcggaataca tggagcggca ttcggtgtcc cgcctgatcg gcgccccgcc gggctatgtc
      961 ggcttcgacc agggcggcct gttgaccgac gccatcgacc agcatccgca ttgcgtgctg
     1021 ctgctggacg agatcgagaa ggcgcatccg gacctgttca acatcctgct gcaggtgatg
     1081 gaccacggcc gcctgaccga ccacaacggc aagatcgtcg acttccgcaa cgtcatcctg
     1141 atcatgacga ccaacgcggg cgccgccgac atggccaagc cggccatcgg cttcggccgc
     1201 accacccgcg aaggcgacga cgccgaggcg atccagcgga tgttcagccc cgaattccgc
     1261 aaccgtctcg acgccaccat ccccttcgcc ggcttgagcg aggaaatcgt cgcccaggtg
     1321 gtggacaagt tcgtcatgca gttggaaacc cagttgggcg accgcgacgt ccagatcgaa
     1381 ctgaccgagg ccgcccgcgg ctggctggcg aagcgcggct acgacccgca attcggcgcc
     1441 cgcccgctgg cccgcgtcat ccaggagcac atcaagaagc cgctggccga ggaattgctg
     1501 ttcggcaagc tggccaaggg cggtgtggtc aaggtggacg tcggcgccga cggcaagctg
     1561 accttcgaca tcagcgaagg ctcgggcaag gacgaaaaag tggtcgagct ggtcgaatag
     1621 ggctaggcca gaggggcgcc cgaacggtcg cccctctggc atcttgactc gaaccgcaaa
     1681 tagtgggcat aattgggccg taagaaagat ggagggcagt cggcaaaacc cagtaatca
//
LOCUS       DATIKR010000285         3826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_40979, whole genome shotgun sequence.
ACCESSION   DATIKR010000285 DATIKR010000000
VERSION     DATIKR010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3826
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40979"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..377
                     /locus_tag="VLL76_04430"
     CDS             147..377
                     /locus_tag="VLL76_04430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28776.1"
                     /translation="MPNTSDESPMGTPNSAKRRVGQLQAAACFAAADSAWIMSSLAAL
                     AETIRAGALPAEIAADLRVLADAIDARCTDDG"
     gene            657..1010
                     /locus_tag="VLL76_04435"
     CDS             657..1010
                     /locus_tag="VLL76_04435"
                     /inference="COORDINATES: protein motif:HMM:NF024835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV28777.1"
                     /translation="MQNRIREIRQDRGLSQEQLADKVGTTKAQISKLEKSQRRLTDQW
                     MRRLAVALECHPGELFADTPVGITPEEQAILDLYRGLSEPDKQAAYRVVDAMAKSHEP
                     NSDSHNGGKKAGNGG"
     gene            1120..1563
                     /locus_tag="VLL76_04440"
     CDS             1120..1563
                     /locus_tag="VLL76_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28778.1"
                     /translation="MEEFMVGLKFSPFDAAHPGQVDFSLRLSSMLFRQRVAWTNQNLL
                     IAIDIPLGALPMGERWPYALRECIALYPVAESGNIEANWIIGSCLCLVVDKAFPALSG
                     GEVVVVDVDANNSVSVTKLHRDRTRNGRVVTSEETVSLGDLLSGG"
     gene            1660..2163
                     /locus_tag="VLL76_04445"
     CDS             1660..2163
                     /locus_tag="VLL76_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV28779.1"
                     /translation="MNVLHPAAAARKPRSKTSRGRLPNGAANPIDVHIGSRIHLRRTL
                     LGISQETLGDRVGLTFQQIQKYERGTNRVGGSRLYDFSCALEVPVSFFFDDMPPEIAA
                     ASPAAVAHGAAYDFQAPPKNPLHTREMLELSRVWLALDRPTRDQVRRLISTIAEAKGI
                     AVDGAEG"
     gene            2168..2557
                     /locus_tag="VLL76_04450"
     CDS             2168..2557
                     /locus_tag="VLL76_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28780.1"
                     /translation="MAKIIRYEVGDDYDVGQLDRNDFPIWGIDAIYDKAEGGFDNRHR
                     NAIMVMTSDEDRRRCLEALNAQLGLDVVGRPRRSEQKLATDNSVQCEALGLVLHPAPG
                     THLCGPCRFTSCPAHPIRRGPVRRAAE"
     gene            2554..2757
                     /locus_tag="VLL76_04455"
     CDS             2554..2757
                     /locus_tag="VLL76_04455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28781.1"
                     /translation="MTARVIVEAGACGVEATMDEWHAAGRYLHFAGGQAVQRMACLSP
                     DEAHRLAAYIDQQSANRVRQAAE"
     gene            2764..>3826
                     /locus_tag="VLL76_04460"
     CDS             2764..>3826
                     /locus_tag="VLL76_04460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSV28782.1"
                     /translation="MTDQTPFDRIVALVEARGISGRAASTGAGLDPSALANAKRQGGK
                     LDLSTITKFANFLGVPLSQLLGEAPPPAAVAGEPTAPHNRIRPSPRNPRKRFDQVAID
                     ELAASVAAKGILQPILVRRANQPGNRPLDGATPDDFEIIAGERRWRAAARCIELGLQP
                     ADWDIPIKLRDCSDREMLEIALTENIQRNDMTPLEEGDAFAQLIDEGATTEDIAKVQG
                     KTMRYVQQRLALVQKLTATAKQKLADGEITFSQARVLTTLPPDRQSDLLPDIDTDMTA
                     DDVRDMALRGLFPVASAIFDLAEYGGVIIEDEEGGRYLADGAEFLRLQQAAIQNKRKE
                     YQAAGTPWVKVTGRDQPGRY"
BASE COUNT          730 a         1336 c         1135 g          625 t
ORIGIN      
        1 cccggggcca acccgtcgca acacgccgaa caggtcgcgc atgatcggat cgcccatgac
       61 gtcagcctcc cccgcctgat accaatgcgt gcatttcgga ttgtatgcat ctatcttgtg
      121 tggcttcttt ccggggagga caggtaatgc cgaacaccag cgacgaatca cccatgggca
      181 cccccaacag cgccaaacgc cgcgttggcc aactgcaagc ggccgcgtgc ttcgccgccg
      241 ccgattccgc ctggatcatg tccagcctgg ccgccttggc cgaaaccatc cgcgccggcg
      301 ccttgcccgc cgaaatcgcc gccgacctgc gcgtgctcgc cgacgccatc gacgcccgct
      361 gcaccgacga cggctaggcc gtagaagtca ttggctgtga ccttgccgcc ggtcagatcg
      421 aaaatgcgac gcaggaccgg aggctccggc acccgcattt ccttgaggta tcgatagacc
      481 gacatgcgcg accgcagctg cagcgcttgc cgcaactggt cgggggaaac gttgttctcg
      541 gtgcaccatt ccgcgagctt catgcacaca aggtatccat gatggatact gcgcgtcaat
      601 atctcgtatc cagcttgggg ccggaccacc gtatccggat cgggtacaat cctcccatgc
      661 agaaccgcat tcgtgaaatc cgccaggatc gcggcctctc tcaggagcag cttgcagaca
      721 aggtcgggac gaccaaggcg cagatatcca agctggagaa gtcacagcgc cgtctcacag
      781 accaatggat gcggcgcctg gccgtcgcgc tggaatgcca cccgggcgaa ctcttcgccg
      841 acacgccggt ggggatcact cccgaggaac aggcgatcct ggatctttac cggggcttgt
      901 ccgaacccga caagcaggcg gcctaccggg ttgttgatgc gatggcgaaa tcacacgaac
      961 ccaattccga ttcccacaac ggcggaaaaa aggccggcaa cggcggctga aaaaattttg
     1021 cctgaaggtg caaccgaacg gggagcgtgc tgtgggaagc aatccctgtc ggtcgtctgg
     1081 ggaggtagat taatctgatt agtggggatt tttggcggaa tggaagaatt catggttggc
     1141 ctcaaatttt caccttttga tgccgcgcac cctggtcaag ttgacttttc gcttcggctg
     1201 tcatccatgt tgttccggca acgagttgca tggactaatc aaaacctgct gatcgcgatt
     1261 gatatccctt tgggtgcgct ccccatgggc gagcgctggc cgtacgcctt acgggaatgt
     1321 attgcgctct accccgtcgc ggaatctggc aacatcgaag ccaattggat aattggatct
     1381 tgcctatgcc ttgttgtgga taaggcattt ccagcgctct cgggcgggga ggtggtggtc
     1441 gttgatgtcg acgccaataa ctctgtttcc gtcaccaaat tgcatcgaga ccgaacgcgc
     1501 aatggccggg ttgttacaag cgaggaaacg gttagcctag gggatctgct gtctgggggc
     1561 tagtcgaccc caaggtatcc aagctggata caaatgactt gacgtcacag tatccaacat
     1621 ggataccatg tgccccatca caacctgatg gaggcaccca tgaacgttct tcaccctgcc
     1681 gctgccgccc gtaagccgcg ctccaagacc tcgcgcggtc gcctgcccaa cggcgccgcc
     1741 aacccgatcg acgtccatat cggcagccgc atccacctgc gccgcaccct gctggggatc
     1801 agccaggaga cgctgggcga ccgggtcggc cttaccttcc agcagatcca gaaatacgaa
     1861 cgcggcacca accgtgtcgg cggctcgcgt ctctacgact tctcctgcgc gctcgaagtc
     1921 ccggtgtcgt tcttcttcga cgacatgccc ccggaaatcg ccgccgcgtc cccggccgcc
     1981 gtcgcccacg gcgcagccta cgatttccag gctccgccca agaaccccct gcacacccgc
     2041 gaaatgctgg aactgtcccg cgtctggctg gctctcgacc gccccacccg cgaccaggtc
     2101 cgccgcctga tcagcaccat cgccgaagcc aagggcatcg ccgtcgatgg cgcggagggt
     2161 tgaggccatg gcgaagatca tccgctacga ggtcggcgac gactacgacg tcggccaatt
     2221 ggaccgcaac gacttcccca tttggggcat cgacgcgatc tacgacaagg ccgagggcgg
     2281 cttcgacaac cgccaccgca acgccatcat ggtgatgacc tccgacgagg accgccgccg
     2341 ctgcctcgag gcgttgaacg cgcaactcgg cctcgacgtc gtcggccggc cccgtcgcag
     2401 cgaacagaag ctggccaccg acaattcggt ccagtgcgag gcgctggggc tggtgctgca
     2461 tccggcgccg ggaacccacc tgtgcggccc gtgccgattc acgtcatgcc cggcgcatcc
     2521 gatccgccgc ggcccggtgc ggagggccgc cgaatgaccg cccgcgtcat cgtcgaggcc
     2581 ggcgcctgcg gcgtcgaggc caccatggat gaatggcacg ccgccggccg ctacctgcac
     2641 ttcgccggag ggcaggccgt gcagcgcatg gcctgcctgt cccccgacga ggcccaccgc
     2701 ctcgccgcct acatcgacca gcaatcggcg aaccgggttc gccaggccgc ggagtaacgc
     2761 gccatgaccg accagacccc cttcgaccgc atcgtcgccc tggtggaggc gcgcggcatc
     2821 agcggccgcg ccgcctccac cggcgccggc ctcgacccca gcgccttggc caacgccaag
     2881 cgccagggcg gcaagctcga cctgtccacc atcaccaagt tcgccaactt cttgggcgtc
     2941 cccttgtccc agctcctcgg cgaagccccg ccgccggcgg cggtcgccgg cgaaccgacc
     3001 gcgccccaca accgcatccg gcctagcccg cgcaacccgc gcaagcgttt cgaccaggtg
     3061 gcgatcgacg aactggctgc ctcggtcgcg gccaagggca tcctgcagcc catcctggtc
     3121 cgccgcgcca accagcccgg caaccggccg ctggacggcg ccacccccga cgacttcgaa
     3181 atcatcgccg gcgaacgccg ctggcgtgcc gccgcccgct gcatcgagtt gggcctgcag
     3241 ccggccgact gggatatccc gatcaagctg cgcgattgct ctgacaggga aatgctggaa
     3301 atcgccctca ccgagaacat ccagcgcaac gacatgaccc cgctggagga aggcgacgcc
     3361 ttcgcccaac tgatcgacga aggcgccacc accgaggaca ttgccaaggt ccagggcaag
     3421 acaatgcgct atgtccagca gcgccttgcc ctggtgcaga agctgacggc gacggcgaag
     3481 caaaagctgg ccgacgggga aatcaccttc agccaggcgc gcgtcctcac caccctgccg
     3541 ccggaccggc aatccgacct gctgcccgat atcgacacgg acatgacggc ggacgacgtg
     3601 cgcgatatgg cgctacgggg cctgttcccc gtcgccagcg ccatcttcga cctggccgaa
     3661 tacggcggcg tcatcatcga ggacgaggag gggggccgct atttggccga cggcgccgaa
     3721 ttcctccgcc tgcagcaggc cgccatccag aacaagcgga aggaatatca ggccgccggc
     3781 actccctggg tcaaggtcac cggccgcgat cagcccggcc gctatt
//
LOCUS       DATIKR010000286         2747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_52442, whole genome shotgun sequence.
ACCESSION   DATIKR010000286 DATIKR010000000
VERSION     DATIKR010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52442"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1862
                     /locus_tag="VLL76_04465"
     CDS             <1..1862
                     /locus_tag="VLL76_04465"
                     /inference="COORDINATES: protein motif:HMM:NF037509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28783.1"
                     /translation="ILIKHGEYSDKVGTYQEVTRADVLALPRILREFEHVPLDHGAHA
                     ETKQVMEMRWEVKREDGAHVRYSLNRGADGEMVTATIHVRGEKKRGPLSKRRATPVTS
                     PSGLSARDTGDRLPFTPAQATGEAARQSYTRAPAARQARGGLSAHVPQAVFDSSGRRL
                     MVRYQLVEADDLVASHTDDLQVNEAFPAELQPRDRTRAAAEAQIHDIVARFEPELLGI
                     SPDAATGAPIVGKGDNVVESGNGRVLAIRRIHAKGGEAAEAYRAFLQRLGFDTRTMRA
                     PVLVRRRLDDLTPEDRRAFTVDAQKSRTMEMSATERAQADAQLLDGILHLLGDDDGRV
                     GDIGLARNAKFVRAFVDALPQTEQGRILSADGSLSLDGRRRIEAALLARAYDDADLLA
                     RMLESDDDNSRAVIGAMLDVAPEWAGMRAAAAKGEINPMVDATGDLVAAVRTVRDARA
                     TGRPLSEIRAQDDMFARRSAVAERFLGVLLRESGEGRVKTASREAIAGDLRRYVDQAM
                     RSNPEPDMFGTKPPGPDELLDLLGREIPDGLPVEPDEEAALRALDDLLAEQKRIDELD
                     DTALDGEIDRLVADGVMDASDPELREIRALLDDGEAESRALDAAATCLIRGTP"
     gene            1859..>2747
                     /locus_tag="VLL76_04470"
     CDS             1859..>2747
                     /locus_tag="VLL76_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28784.1"
                     /translation="MSWQDCAESVRAASGRDLDDSTVARLFEDVQLRADRLRRDRPDL
                     SHAELVRQAAKEASAEADMAARIEARNRKLNLTKRVARRKFYEAAPDVLLGLEAKLVG
                     VNTPIAGGRLSVAAQAHTLQRDFAAGVTIELERAGLYRFVRDGKDDRAIARELFELNR
                     EGGDPEGTARSSQPGSSKNAHAAQAAAIIHKFQEAARLAMNKEGAWIGQYDGWIARTS
                     HDSDRIRRAGYDRWKADFLAGHDARTFDGIEDREGFLKGVYNGLVTGIHLTPDGLQGF
                     KDPAFSGPGNLAKRLSQGRK"
BASE COUNT          466 a          970 c          959 g          352 t
ORIGIN      
        1 agatcctgat caagcatggc gagtactcgg acaaggtcgg cacctaccag gaggtcaccc
       61 gcgccgacgt cttggccctg ccccggatcc tgcgcgagtt cgagcacgtc ccgctggacc
      121 atggcgcgca tgccgaaacc aagcaggtca tggagatgcg ctgggaggtc aagcgcgaag
      181 acggggcgca cgtgcgctac agcctgaacc gcggcgccga cggcgagatg gtcacggcga
      241 ccattcatgt gcgtggggag aagaagcgcg ggccgctgtc aaagcggcgc gccaccccgg
      301 tgacgtcccc aagcgggtta agcgcaaggg atactggcga ccgactaccc ttcacgccgg
      361 cgcaggccac cggggaggcg gcaagacaat cctacacccg cgccccggcc gcccgtcaag
      421 cgcgtggagg tcttagcgcc catgtgcccc aggcggtgtt cgattcgtcc ggccggcggc
      481 tgatggtgcg ctatcagctt gtggaggccg acgacctggt cgccagccac accgacgacc
      541 tgcaggtgaa cgaggccttc ccggccgagc tgcagccgcg cgaccgcacc cgcgccgcgg
      601 ccgaggcgca gatccacgac atcgtcgccc gcttcgaacc ggaattgctg ggcatctcgc
      661 ccgacgccgc caccggcgca cccatcgtcg gcaagggcga caacgtggtg gaatccggca
      721 atggccgcgt gctggccatc cggcgcatcc acgccaaggg cggcgaggcg gcggaagcct
      781 atcgtgcttt tctgcagcgg ctgggcttcg acacccggac catgcgggcg cccgtgctgg
      841 tgcgccggcg cctcgacgat ctgacgcccg aggaccgccg ggcgttcacc gtcgacgccc
      901 agaaatcccg caccatggaa atgtcggcga ccgaacgggc ccaggccgat gcccagttgc
      961 tggacggcat cctgcacctg ctgggggacg acgacggccg ggtcggcgac atcggcctgg
     1021 cgcgcaacgc caagttcgtc cgcgccttcg tcgatgccct gccccagacc gaacaggggc
     1081 gcatcctgtc ggccgacggc agcctgtcgc tggacggccg ccgccgcatc gaggcggcgc
     1141 tgctggcgcg ggcctatgac gatgccgacc tgctggcgcg catgctggaa tccgacgacg
     1201 acaattcgcg cgccgtcatc ggcgccatgc tggacgtggc cccggaatgg gccggcatgc
     1261 gtgccgccgc cgcaaagggc gagatcaacc ccatggtcga tgccaccggg gatctggtgg
     1321 cggccgtgcg gaccgtgcgc gacgcccgcg ccaccggccg gccgctgtcc gagatccgcg
     1381 cccaggacga catgttcgcc cggcgcagcg ctgtggcgga acggttcctg ggggtgttgc
     1441 tgcgggaaag cggcgaaggc cgggtcaaga cggcaagccg cgaagccatt gccggcgacc
     1501 tgcgccgcta cgtggaccag gccatgcggt cgaaccccga acccgacatg ttcggcacca
     1561 agccgccggg ccccgacgaa ttgctggacc tgctggggcg cgagatcccc gacggcctgc
     1621 cggtcgagcc ggacgaagag gccgccttgc gcgcccttga cgacctgctg gccgaacaga
     1681 agcgcatcga cgaactggac gacaccgcgc tggacggcga aatcgaccgc ctggtcgccg
     1741 acggcgtgat ggacgccagc gatcccgaac tgcgcgagat ccgcgccctg ctggatgacg
     1801 gcgaggccga aagccgggcg ctggatgccg ccgccacctg cctgatccga gggacaccat
     1861 gagctggcaa gattgcgccg aatccgtccg cgcggcatcg ggccgcgacc tcgacgattc
     1921 caccgtcgcg cggctgttcg aggatgtgca actgcgcgcc gaccggctgc gccgcgaccg
     1981 gcccgatttg tcccatgccg agctggtgcg ccaggcggcc aaggaggcgt cggccgaggc
     2041 cgacatggcg gcccgcatcg aggcgcgcaa ccgcaagctc aacctgacca agcgggtggc
     2101 ccggcggaaa ttctatgaag cggcgcccga cgtgctgctg gggctggaag ccaagctggt
     2161 gggcgtcaac acgcccatcg ccggcggccg cctgtcggtg gcggcgcagg cccacacgct
     2221 gcagcgcgat ttcgccgccg gcgtcaccat cgagctggag cgcgccggcc tttatcgctt
     2281 cgtccgcgac ggcaaggacg accgcgccat cgcccgcgag ctgttcgaac tgaaccgcga
     2341 gggcggcgac cccgaaggga cggcgcggag cagccaaccg ggttcgtcga agaacgccca
     2401 cgcggcccaa gccgccgcca tcatccacaa gttccaggaa gcggcacggc tggcgatgaa
     2461 caaggagggc gcctggatcg ggcagtacga cggctggatc gcgcgcacgt cccatgattc
     2521 cgaccgcatc cgccgcgccg gctacgaccg ctggaaggcg gatttcctgg ccggccatga
     2581 cgcgcgcacc ttcgacggca tcgaggaccg cgaaggtttc ctgaagggcg tctacaacgg
     2641 cctggtcacg ggcatccatc tgacgcccga cggcctgcag ggtttcaagg acccggcgtt
     2701 ctcggggccc ggcaacctgg ccaagcgatt gagccagggt cgcaagc
//
LOCUS       DATIKR010000287         4574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_41026, whole genome shotgun sequence.
ACCESSION   DATIKR010000287 DATIKR010000000
VERSION     DATIKR010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41026"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..776)
                     /gene="kdpC"
                     /locus_tag="VLL76_04475"
     CDS             complement(198..776)
                     /gene="kdpC"
                     /locus_tag="VLL76_04475"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HSV28785.1"
                     /translation="MWTHLRSAVVLVVVMTALTGLAYPLAVTGLADLTFPWQAKGSLI
                     EKDGKVVGSALIGQKFDNPAYFHGRPSAAGEGYDAANSGGSNLAPSSRKLVDDVTARV
                     VAERKANPDEPGPVPADLVTASASGLDPHISPATASYQVKRVAAYRHVPVEEVRKLVT
                     EHTEGRELGLLGEPRINVLKLNLALDERWPMK"
     gene            complement(791..2827)
                     /gene="kdpB"
                     /locus_tag="VLL76_04480"
     CDS             complement(791..2827)
                     /gene="kdpB"
                     /locus_tag="VLL76_04480"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HSV28786.1"
                     /translation="MSIHRPQGLALFDRAILAQAAVDAVKKLDPRQLVRNPVMFATAL
                     VAVVATILTARGGPLVGVMIQISAWLWFTVLFANFAEAIAEGRGKAQAASLRKTKTEA
                     MAKRVSSADAAAFETIPAQRLRAGDLVVCEPGDVIPGDGDVVAGIATVDESAITGESA
                     PVIRESGGDRSAVTGGTRVVSDRIVVQITVNPGESFLDRMITLVEGAKRQKTPNEIAL
                     TILLVGMTLIFLFVVATLPVFASYSGAAVPVVFLAALFVTLIPTTIGGLLSAIGIAGM
                     DRLVKFNVIAKSGRAVEAAGDIDVLLLDKTGTITLGARQAAEFLPLSEVNERDLAEAA
                     FLSSLADETPEGKSIVALARTRFGLAEPDRGGMSFVPFTAQTRMSGVDLGGSEIRKGA
                     SDSIARYVAERSGRVAPKELNQLVERVAKSGGTPLVVARDGRPLGVIHLKDIIKPGIR
                     ERFATLRAMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEATPEKKLELIRDYQQGGRL
                     VAMCGDGSNDAPALAQADVGVAMNTGTQAAREAGNMVDLESDPTKLIEIVMIGKQLLM
                     SRGALTTFSIANDVAKYFAIIPALFLASYPQLQALNVMHLASPQSAVLSAIIFNALII
                     IALIPLALKGVRYRPAGAEALLKRNLLVYGLGGLVVPFIGIKLIDLAVAALGLA"
     gene            complement(2838..4547)
                     /gene="kdpA"
                     /locus_tag="VLL76_04485"
     CDS             complement(2838..4547)
                     /gene="kdpA"
                     /locus_tag="VLL76_04485"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HSV28787.1"
                     /translation="MDATGILQILLYVAIIVALTPLAGGYMARLYEGKVSFLAWVERP
                     IYRLCGTSVDREQHWTGYALSLLAFNLVGVLVLYGLQRLQVWLPLNPAGMAAVPADLA
                     FNTAVSFTTNTNWQAYGGEATMSYLTQMAGLSVQNFVSAATGIAVAVVLIRGFARRSA
                     RTVGNFTIDLTRTVLYLLLPICIVGALVLVWLGVPQNLSPYVEATTLEGGKQIIAQGP
                     VASQMMIKHLGTNGGGFFNANAAHPYENPSAVVNLIHMVAIFVLGAGLTNTFGRMIGD
                     TRQGWAILAAMGLLFVAGVGITYWADAAGNPALAAIGVDQSLSPWQAGGNMEGKEVRF
                     GIALSALFATITTAASCGAVIAMHDSLMPLAGLVPMVNMMLGEVIVGGVGAGLYGMLV
                     FVVLTVFIAGLMVGRTPEYVGKKIEAKEIKLAVIVILVFPVGILGLGAVALLAGPSAI
                     AAPGPHGLSQLLYAYTSATANNGSAFAGFGANAVLHNTLLGVAILLGRFVVIVPTLAI
                     AGAVAAKKTIPPSSGTFPTHGWLFIGLLVAVVLVVGGLTFFPVLALGPVVEHLSLASG
                     ALF"
BASE COUNT          775 a         1496 c         1593 g          710 t
ORIGIN      
        1 gaggaagatc ttcaaacgcc cgtgcccttc tcgcgcggct tcggcgagaa gggcttcggg
       61 ggaaggacgg ttgtcgtctt cgctcatttc attccgccct caggcgccgg gcgggcgcat
      121 ccgcgccctt ggctcacgcg cgatgaccgc gcgggcgctc aatgcgccag tcgcctgcgt
      181 cgcaggctcc acgaacttca cttcatcggc catcgctcgt ccagcgccag attgagtttc
      241 agcacgttga tgcgcggttc gccgagcagg ccgagttccc gcccctcggt atgctccgtc
      301 accaatttgc gaacctcctc caccgggaca tggcggtagg cggccacccg cttgacctga
      361 taggaggcgg tggcggggga gatatggggg tcgaggcccg atgccgaggc cgtcaccaga
      421 tcggcgggca ccggccccgg ttcgtcggga ttggccttgc gttcggcgac gacgcgggcg
      481 gtcacgtcgt cgaccagctt gcggctgctt ggtgccagat tgctgccgcc ggaattggcc
      541 gcgtcatagc cttcgcccgc cgccgagggg cgcccgtgga aatatgccgg gttgtcgaac
      601 ttctggccga tcaaagccga gccgaccacc ttgccgtcct tttcgatcag gctgcccttg
      661 gcctgccagg ggaaggtcag gtcagccagg ccggtgacgg ccagcggata ggccagcccg
      721 gtgagtgcgg tcatgaccac gaccaggacg acggcggagc gcagatgggt ccacatatcg
      781 aaacctccgt tcacgccagc ccgagggcgg cgacggccag atcaatcagc ttgataccga
      841 tgaacggcac caccagcccg cccaggccgt agacgagcag gttgcgcttc agcagcgctt
      901 cggccccggc agggcggtag cgcacaccct tcagcgccag cgggatcagg gcgatgatga
      961 tcagcgcgtt gaagatgatg gccgacagca ccgccgattg cgggctggcg aggtgcatga
     1021 cgttcagcgc ctggagttgc ggataggacg ccaggaacag ggccgggatg atggcgaaat
     1081 acttcgccac gtcgttggcg atggagaagg tggtcagcgc ccctcggctc atcagcaact
     1141 gcttgccgat catgacgatc tcgatgagct tggtggggtc gctttccagg tccaccatgt
     1201 tgcccgcctc gcgcgccgcc tgggtgccgg tgttcatggc gactcctaca tcggcctggg
     1261 ccagggcggg cgcgtcgttg gaaccgtcgc cgcacatggc gaccagacgg ccgccctgct
     1321 ggtagtcgcg gatcagttcc agcttttttt ccggcgtggc ctcggccagg aagtcgtcca
     1381 cgcccgcctc ggcggcgatg gcggcggcgg tcagcgggtt gtcgcccgtg atcatcaccg
     1441 tcttgatgcc catggctcgc agggtggcga agcgttcgcg gatgccgggc ttgatgatgt
     1501 ccttgagatg gatgacgccc agcgggcgcc cgtcgcgggc caccaccagg ggggtgccgc
     1561 ccgacttcgc cacccgttcc accaattgat tgagttcctt gggggcgacg cgaccgctcc
     1621 gctcggccac gtaacgggca atggaatccg aggcgccctt gcggatttcg ctgccgccca
     1681 gatcgacgcc gctcatgcgg gtctgggcgg tgaaggggac gaagctcatg ccgccgcgat
     1741 ccggctcggc caggccaaaa cgggtgcggg ccagggcgac gatggacttg ccttccgggg
     1801 tttcgtcggc cagcgacgac aggaaggcgg cttcggccag gtcgcgctcg ttgacctcgg
     1861 acagcggcag gaactcagcg gcctgacggg cgcccagggt gatggtgccg gtcttgtcga
     1921 gcagcagcac gtcgatgtcg cccgccgcct cgacggcgcg gcccgacttg gcgatgacat
     1981 tgaacttcac cagccggtcc atgcccgcga tgccgattgc ggacagcagg ccgccgatgg
     2041 tcgtggggat cagggtgacg aacagggccg ccaggaacac caccggcacc gccgcgcccg
     2101 aatacgaggc gaacaccggc agggtggcga ccacgaacag gaagatcagc gtcatgccga
     2161 ccagcaggat cgtcagggcg atctcgttgg gggtcttctg gcgcttggca ccctcgacca
     2221 gggtgatcat gcggtcaagg aagctctcgc cggggttcac ggtgatctgc accacgatgc
     2281 ggtcggagac cacgcgggtg ccgcccgtca ccgccgagcg gtcgccgccg ctctcgcgga
     2341 tgaccggcgc ggactcgccc gtgatggcgc tttcgtcgac cgtggcgata cccgccacca
     2401 cgtcgccgtc gccggggatg acgtcgcccg gttcgcacac caccaggtcg cccgcccgca
     2461 ggcgctgggc cgggatggtc tcgaacgcgg cggcgtccgc cgatgacacg cgcttcgcca
     2521 tcgcctcggt tttggtcttg cgcaaggatg cagcctgcgc cttgccgcgc ccttcggcga
     2581 tggcttcggc gaagttggcg aacaacacgg tgaaccacag ccaggcgctg atctggatca
     2641 tcacgccgac gagcgggccg ccgcgcgcgg tcaggatggt ggcgaccacg gccaccaggg
     2701 cggtggcgaa catcaccggg ttgcgcacca gttggcgcgg atcgagtttc ttgacggcat
     2761 cgactgccgc ctgggccagg atggcgcggt cgaacagcgc cagcccctgg ggacgatgga
     2821 tactcatgga aggctcctca gaacagggcg ccggaagcga gcgacaggtg ctcgaccacc
     2881 ggcccgaggg cgaggacggg gaagaaggtg aggccgccca ccaccagcac gaccgccacc
     2941 agcaggccga tgaacagcca gccatgggtg gggaaggtgc ccgaggacgg cgggatggtc
     3001 ttcttggcgg cgaccgctcc ggcgatggcg agcgtgggca cgatcactac gaaccggccc
     3061 agcagaatgg caacgcccag cagggtgttg tgcagcacgg cgttagcacc gaagcccgcg
     3121 aaggcggaac cgttgttggc cgtcgccgag gtgtaggcgt agagcagttg cgacagccca
     3181 tgcggtcccg gcgccgcgat ggcgctgggg cctgccagca gcgcgacggc gcccaggccg
     3241 aggatgccga ccgggaagac caggatgacg atgaccgcca gcttgatctc cttggcctcg
     3301 atcttcttgc ccacgtattc cggcgtgcgg ccgaccatca gcccggcgat gaatacggtc
     3361 aggacgacga acaccagcat gccgtagaga ccggcgccga cgccgccgac gatgacctcg
     3421 cccagcatca tgttgaccat gggcaccagc ccggccagcg gcatcaggct gtcgtgcatg
     3481 gcgatcaccg cgccgcaact ggccgccgtg gtgatggtgg cgaacagggc cgagagggcg
     3541 atgccgaagc gaacctcctt gccttccatg ttgccgcccg cctgccacgg cgagagcgac
     3601 tggtcgacgc cgattgccgc cagcgccggg ttgcctgccg cgtcagccca ataggtgatg
     3661 ccgacgcccg ccacgaacag cagacccatg gcggccagga tggcccagcc ttggcgggtg
     3721 tcaccgatca tgcgaccgaa tgtgttggtc agccccgcac ccagcacgaa gatcgccacc
     3781 atgtggatca ggttcacgac cgcactgggg ttctcgtagg gatgggcggc gttggcgttg
     3841 aagaagccgc cgccgttggt gcccagatgc ttgatcatca tctggctggc gaccggcccc
     3901 tgggcgatga tctgcttgcc gccttcgagc gtggtcgcct cgacgtaggg cgacaggttc
     3961 tgcggcacgc ccagccacac cagcaccagg gcgccgacga tgcagatggg gagcagcagg
     4021 tagaggacgg tgcgggtcag atcgatggtg aaattcccca ccgtgcgcgc cgaccgccgg
     4081 gcgaagcctc ggatcagcac caccgccacg gcgatgccgg tggcggcgga gacgaaattc
     4141 tgcaccgaca gcccggccat ctgggtcaga tagctcatgg tggcctcgcc gccataagcc
     4201 tgccaattgg tgttggtggt gaagctgacg gcggtgttga aggccaggtc agccggcacc
     4261 gccgccatcc ccgccgggtt caacggcagc cagacttgca ggcgttgcag gccgtagagc
     4321 accaggacgc cgacgaggtt gaaggccagc agcgacaggg catagccggt ccaatgctgc
     4381 tcgcggtcga ccgaggtgcc gcacaggcgg tagatggggc gctcgaccca ggccaggaac
     4441 gagaccttgc cctcgtacag tcgcgccatg tagccgcccg ccagcggcgt cagcgccacg
     4501 atgatggcga catagagcag gatttgcagg atgccagtgg cgtccatggt ggcctcctag
     4561 aaccgctcgg gatg
//
LOCUS       DATIKR010000288         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_161489, whole genome shotgun sequence.
ACCESSION   DATIKR010000288 DATIKR010000000
VERSION     DATIKR010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161489"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..564
                     /locus_tag="VLL76_04490"
     CDS             88..564
                     /locus_tag="VLL76_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HSV28788.1"
                     /translation="MSRLVLALAALLALASPAFAVDPAEMLKDPQQEHRAQALGKELR
                     CLVCQSESIEDSNADLARDLRVIVRERIASGDSDDQVMKFVVDRYGDYVLLKPPFKAS
                     TLVLWIGPFALFAIGVLVVFGFYRKRAAAAPSLQPAPLSAEEKRRLEALLKDSGKQ"
     gene            561..1391
                     /gene="ccmI"
                     /locus_tag="VLL76_04495"
     CDS             561..1391
                     /gene="ccmI"
                     /locus_tag="VLL76_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HSV28789.1"
                     /translation="MIWMIFAVMVAVALAILVLPLLKHRSKPLARAEYDLAVYKDQLG
                     EIDRDVERGVLTPDQAEAARTEISRRMLAAADAKEGAAASPRGGKLAVAAIVTLVPLV
                     AFGLYGTLGHPGLPDQPFADRKGQVQDMQQQADMFKGMVASLAAKLEQNPKDGKGWAM
                     MGRSLKVLGESDKARDAYKKAIALLPGDAMVRLEYGGLLLEEIPQGSALPPEFVALMR
                     DVNAIDPNQPDALYFLGISEFQEGRKLKARTYWTKLLDKVPEGSEDRIEVLKLIESTK
                     "
     gene            complement(1626..>1841)
                     /locus_tag="VLL76_04500"
     CDS             complement(1626..>1841)
                     /locus_tag="VLL76_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HSV28790.1"
                     /translation="LVLGARRGGVLLSLLILPLYVPVLIFSVGAIDATVQGLSATPHL
                     LFLGGILAAALPLAPWAASAALRQALE"
BASE COUNT          323 a          626 c          623 g          269 t
ORIGIN      
        1 cgtcatccgc tacaagcaca tcggcccgat caaccgcgaa aactgggagc gcgtgctgct
       61 gcccatcatc cgggaactgg agaagaaatg agccgtctgg ttctggccct cgccgccctg
      121 ctggcgctgg cgagtcccgc cttcgcggtc gatcccgccg agatgctgaa ggacccgcag
      181 caggaacacc gcgcccaggc cttgggcaag gaattgcgct gcctggtgtg ccaaagcgaa
      241 tccatcgagg attccaacgc cgacctggcc cgcgacctgc gcgtcatcgt gcgcgagcgc
      301 atcgcctcgg gcgacagcga cgaccaggtg atgaagtttg tggtcgaccg ctacggcgat
      361 tacgtgctgc tgaagccgcc gttcaaggcc tccaccctgg tgctgtggat cggtcccttc
      421 gcgctgttcg ccatcggcgt gctggtggtg ttcggcttct atcgcaagcg cgccgccgcc
      481 gccccctcgc tgcagccggc gcccctgtcg gccgaggaaa agcgccggct cgaagctctg
      541 ttgaaggaca gcggcaagca atgatctgga tgattttcgc ggtcatggtg gcggtggcgc
      601 tggccatcct ggtgctgccg ctgctcaagc accggtccaa gccgctggcg cgcgccgaat
      661 acgatctggc ggtctacaag gaccagttgg gagaaatcga ccgcgacgtc gagcgcggcg
      721 tgctgacgcc cgaccaggcc gaagccgccc gcaccgagat ctcgcgccgc atgctggccg
      781 ccgccgatgc caaggaaggc gccgccgcct cgccgcgcgg cggcaagctg gccgtcgccg
      841 ccatcgtgac cctggtgccg ctggtcgcct tcggccttta cggcacgctc ggccaccccg
      901 gcctgcccga ccagcccttc gccgaccgca agggccaggt ccaggacatg cagcagcagg
      961 ccgacatgtt caagggcatg gtcgccagcc tggccgccaa gctggagcag aaccccaagg
     1021 acggcaaggg ctgggccatg atgggccgtt cgctcaaggt gctgggcgag tccgacaagg
     1081 cgcgcgacgc ctataagaag gcgatcgcgc tgctgcccgg cgacgccatg gtgcggctgg
     1141 aatacggcgg cctgctgctg gaggagatcc cccagggctc ggccctgccg ccggaattcg
     1201 tggccctgat gcgcgacgtc aacgccatcg accccaacca gcccgacgcg ctgtatttcc
     1261 tgggcatctc ggaattccag gaaggccgca agctcaaggc ccgcacctat tggaccaagc
     1321 tgctggacaa ggtcccggaa ggcagcgagg accgcatcga agtgctgaag ctgatcgaga
     1381 gcaccaagta gcgcttacgg cttgcgcaga gtcagaagac acggatgaag gggaccggcg
     1441 ctacgcgccg ggcacggatg gaggggatgc gtctggggtg caccccgaga aacgttgatc
     1501 cgatccggaa ccgcgtggtt gtccgcgcaa gcccgggcac gacgagtttg ggcggtgcct
     1561 ccgtgttcat cccccaggcc gcgccagcgg ccatcccctt catccgtgtt tcaatgacga
     1621 ggtggttatt ccagcgcctg cctgagcgcc gccgaggccg cccatggcgc cagcggcagg
     1681 gcggccgcga ggatgccgcc gaggaacagc aggtgcgggg tggccgacag gccctggacg
     1741 gtggcgtcga tggcgccgac cgagaagatc agcaccggca cgtagagcgg caggatcagc
     1801 agcgacagca gaacgccgcc gcgccgcgcc cccagcacca g
//
LOCUS       DATIKR010000289         3374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_16160, whole genome shotgun sequence.
ACCESSION   DATIKR010000289 DATIKR010000000
VERSION     DATIKR010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16160"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1140)
                     /locus_tag="VLL76_04505"
     CDS             complement(<1..1140)
                     /locus_tag="VLL76_04505"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HSV28791.1"
                     /translation="MMYTNSFDRRPSPFAADFFTLGAPVGPDQPNRREDVIKVETILG
                     NTGHHDLAATAGPLGWWGERQEKAVKAWQGENGLKVDGVLKPGGPTIASLRRRTGGLL
                     GGFTPPTPDEVDEHHTRLQQGESGLLNTRPARLSIRVPETVPELDEQTQAFNADTARA
                     LTRTSVDGDVPRIYADYLKQAGADGHTTGLDLVEQVNHSQGRDRAERVLHGILGQLPP
                     EQAKAFLGGEVPPRRPLGVRVADLADDDKVPLFARAAAPAAEAPKPVQLAQADTGTKT
                     DAAPADAQGDGQQVAAMNQRELANPNGTRPQLEGGGGMGVGGGPGSGAAIGAAIRQAA
                     GEVVGKVKDLFGQGQQTTVADPQAGKPQVLPGADPSKPQTQQGTPP"
     gene            complement(1363..1438)
                     /locus_tag="VLL76_04510"
     tRNA            complement(1363..1438)
                     /locus_tag="VLL76_04510"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1403..1405),aa:Thr,seq:ggt)
     gene            1551..1727
                     /locus_tag="VLL76_04515"
     CDS             1551..1727
                     /locus_tag="VLL76_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28792.1"
                     /translation="MSSQKPQPVPSAKGRAEADERQRRQAEALRANLARRKAQSRARA
                     DSDPEPADPKPEAE"
     gene            complement(1729..2193)
                     /locus_tag="VLL76_04520"
     CDS             complement(1729..2193)
                     /locus_tag="VLL76_04520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV28793.1"
                     /translation="MGLLRTLVLALMVAVSAVAPACADSHKLTPDQVRALTIKAVDLI
                     QSEGLAAASARFNALGEFKHGEIYVNVIDFEGVWLCYPPNPELVGRSVLNVKDLDGRY
                     LVQEILATAIDRGEGWVEYKWMNPANQMVQPKRTFVKRVPGKALVAYIGLYE"
     gene            2418..>3374
                     /gene="murA"
                     /locus_tag="VLL76_04525"
     CDS             2418..>3374
                     /gene="murA"
                     /locus_tag="VLL76_04525"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSV28794.1"
                     /translation="MDRIRIIGGVPLKGSIPIGGAKNAALALMPACLLTDETLTLSNL
                     PHLVDITTMANLLAQHGVGMALNGDVQGGHTGRVLGLTAAEIVNTTAPYDLVRRMRAS
                     VLVLGPLLARCGQARVSLPGGCAIGTRPVDLHLKALEQMGARIELEEGYISARVDGRL
                     KGAHIIFPQVTVGGTENLLMAATLAEGETVLANAAREPEVTDLAQCLIAMGARIEGIG
                     TGTLRIQGVDRLHGAEYSVVPDRIETGTYAVAAAITRGDIELVGARFDLMESVNKVLT
                     DCGVLVEKTERGMRVAAEGRDIVGTDIMTEPYPGFPTDMQAQF"
BASE COUNT          529 a         1153 c         1140 g          552 t
ORIGIN      
        1 ggggggcgtg ccctgctgcg tctgcggttt ggacgggtcg gctccgggca gaacctgcgg
       61 cttgccggcc tgcgggtcgg ccacggtggt ctgctggcct tggccgaaca aatccttcac
      121 cttgcccaca acctcaccgg cggcctgacg gatggcggca ccgatggcag cgccgcttcc
      181 agggccgccc ccgacgccca tgccgccacc accttccaac tgcgggcgcg ttccgttcgg
      241 gttggcaagc tcgcgttggt tcatggccgc gacttgttgg ccgtctcctt gcgcgtccgc
      301 cggtgccgcg tcggtcttgg tgcccgtgtc ggcctgggcc agttggaccg gcttcggcgc
      361 ctcggccgcc ggtgccgccg cccgcgcgaa cagcggcacc ttgtcgtcat cggcgaggtc
      421 ggcgacgcgc acgccgaggg ggcgccgggg cggcacctcg ccgcccagga aggccttggc
      481 ctgctcgggc ggcaattgac cgaggatgcc gtgcagcacc cgttcggcgc ggtcgcggcc
      541 ttggctgtgg ttgacctgct cgaccagatc gagaccggtg gtgtggccgt cggcgccggc
      601 ctgcttcaaa tagtcggcgt agatcctggg cacgtcgcca tcgacgctgg tgcgggtcag
      661 cgcgcgggcg gtgtcggcgt tgaaggcctg cgtctgctcg tccagttccg ggacggtttc
      721 cggcacgcgg atggacagcc gcgccggccg ggtgttgagc aggccgctct cgccctgttg
      781 caggcgggtg tgatgctcgt ccacctcgtc cggggtcggg ggcgtgaaac cgcccagcaa
      841 gccgccggtc cgccgcctca ggctggcgat ggtggggccg cccggcttca gcacgccgtc
      901 caccttgagg ccgttctcgc cctgccacgc cttcaccgcc ttttcctgcc gctcgcccca
      961 ccaccccagc gggccggcgg tcgcggccag gtcgtggtgg ccggtgttgc cgaggatggt
     1021 ttcgaccttg atcacgtctt cgcgccggtt cggctggtcg ggaccgacgg gcgccccgag
     1081 ggtgaagaaa tcggcggcga agggggacgg gcgccgatcg aagctgtttg tgtacatcat
     1141 ttgttctccg cggggtccga aaaaagcggc cttccggccg ccgagcatgg ggaatggtaa
     1201 atggggcgcc cgagaactgc aagggatatt ttccttagat aggatcattg cgctgccatc
     1261 cgcattgccc cattccactt ccgaacttcg ggagccaaga cggaaaagcc cgcgaccttg
     1321 cggtgcgggc ttctgcaacg tcctgaattt tcaggagaaa aatggtgctg ccgaatggaa
     1381 tcgaaccatc gaccttaccc ttaccaaggg tatgctctac cgactgagct acggcagcgt
     1441 tccggggttc cccccgaaga ggcgcgcttt atgccacagg gtttttggta acgcaagcac
     1501 ctttgtgcgg ggtgttgacc aaagtttcga agcggggaaa agtgggggtc atgagcagcc
     1561 agaaacccca acccgtcccc agcgccaaag gccgggccga ggccgatgag cggcagcggc
     1621 gtcaggccga ggcattgcgt gccaacctgg cgcggcgcaa ggcgcaaagc cgtgcccgcg
     1681 ccgattccga tccggaaccg gccgacccca agcccgaggc ggaatgactt attcgtacag
     1741 gccgatatag gcgaccaggg ccttgccggg gacgcgcttg acgaaggtgc gcttgggctg
     1801 gaccatctgg ttcgccgggt tcatccactt gtattcgacc cagccctcgc cgcggtcgat
     1861 ggcggtggcc aggatttcct gcaccaggta gcggccgtcc aggtccttga cgttcagcac
     1921 cgagcgcccg accagttccg gattgggcgg atagcacagc cacacgccct cgaagtcgat
     1981 gacgttgaca tagatctcgc cgtgcttgaa ctcgcccagg gcgttgaagc gggccgaggc
     2041 ggcggccaga ccctcggact ggatcaggtc gaccgccttg atggtcaggg cgcgcacctg
     2101 gtcgggcgtc agcttgtggc tgtcggcgca agcgggcgca acggcggaca ccgccaccat
     2161 cagcgccaac accaaggtcc gcagcaatcc cattccgtcc cccctgaacc tcgccattgt
     2221 aaccaataga cgcatgctac gcaccgcatt ttgcgcgacg acgcacgcgc cttgacctgg
     2281 ggcgcccata gggttaaacg ggggcgctca ccccataggg gtggatgggc gcgcatcgga
     2341 gaaccgcctt cggtctgcca tgatcaggcc ctagaggaag cccctcgccc gcccaaggct
     2401 caagaacgag gactggaatg gacaggatcc gcatcatcgg cggagtgccg ctgaaaggga
     2461 gcatccccat cggcggcgcc aagaacgcgg cgctggcgct catgcccgcc tgcctgctga
     2521 ccgacgagac gctgactctg tcgaacctgc cgcatctggt ggacatcacc accatggcca
     2581 acctgctggc gcagcacggc gtcggcatgg cgctcaacgg cgacgtccag ggcggccaca
     2641 ccggccgcgt gctgggcctg accgccgccg agatcgtcaa caccaccgcg ccctacgacc
     2701 tggtgcgccg catgcgcgcc tcggtgctgg tgctgggacc gctgctggcc cgttgcggcc
     2761 aggcccgcgt ctccctgccc ggcggctgcg ccatcggcac ccgcccggtg gacctgcacc
     2821 tcaaggcgct ggagcagatg ggcgccagga tcgagctgga agagggctat atctcggccc
     2881 gcgtcgatgg ccgcctcaag ggcgcccaca tcattttccc gcaggtcacc gtcggcggca
     2941 ccgagaattt gctgatggcc gccaccctgg ccgagggcga gacggtgctg gccaacgccg
     3001 cccgcgagcc cgaggtcacc gacctggccc aatgcctgat cgccatgggc gccaggatcg
     3061 agggcatcgg caccggcacc ctgcgcatcc agggcgtcga ccgcctgcac ggcgccgagt
     3121 attcggtggt gcccgaccgc atcgagaccg gcacctatgc ggtggccgcc gccatcacgc
     3181 gcggcgacat cgagctggtg ggcgcccgct tcgacctgat ggagtcggtc aacaaggtgc
     3241 tgaccgattg cggcgtgctg gtggaaaaga ccgagcgcgg catgcgcgtc gccgccgagg
     3301 gccgcgacat cgtcggcacc gacatcatga ccgagcccta tcccggcttc cccaccgaca
     3361 tgcaggccca gttc
//
LOCUS       DATIKR010000290         6027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_41081, whole genome shotgun sequence.
ACCESSION   DATIKR010000290 DATIKR010000000
VERSION     DATIKR010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41081"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VLL76_04530"
     CDS             complement(<1..722)
                     /locus_tag="VLL76_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28795.1"
                     /translation="MDHSEIDVRMDRPFPLQRIFRRRIVPAILLILALMAGLGGLAET
                     RIAREVYLNIARSRAEVIAGAVAAEAPEAWRLLLDAPLTLLHDPAATAALQAAFAEVL
                     SDARIAKVKVYEPSGRLILGGAADKLGKLEAAPQLRDAITTGEAIALRTSDADAPVYE
                     FYVPIVDHDGAVRLAFEIYEPAGFLDRILLLNALPAIALPAVLMTLLLAWLVGIVGRA
                     QKEIDLRTAALSDMRQRLERLVS"
     gene            complement(796..1461)
                     /gene="gph"
                     /locus_tag="VLL76_04535"
     CDS             complement(796..1461)
                     /gene="gph"
                     /locus_tag="VLL76_04535"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975750.1"
                     /note="PGP is an essential enzyme in the glycolate salvage
                     pathway in higher organisms (photorespiration in plants).
                     Phosphoglycolate results from the oxidase activity of
                     RubisCO in the Calvin cycle when concentrations of carbon
                     dioxide are low relative to oxygen. This enzyme is a
                     member of the Haloacid Dehalogenase (HAD) superfamily of
                     aspartate-nucleophile hydrolase enzymes (PF00702); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA];
                     GO_process: GO:0009853 - photorespiration [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HSV28796.1"
                     /translation="MPPRFKAVVFDLDGTLIHSVPDLTVAVNKLLAEEGRPALADADV
                     GPMVGDGVGMLVRRAFTAAGGVPEGDLAPYVARFVAHYEPHAADLTRPYPGVIATLRS
                     LKAKGLKLAVCTNKVSGATRRILAALEIERYFDAVVGGDDTPVHKPDPTHVRITLDKL
                     GVSDAETLYVGDSENDVKAAKGAGLPVVLVTFGYTRIPVAELGGDLLIDRFQDLPAAM
                     GRL"
     gene            1662..3011
                     /gene="glmU"
                     /locus_tag="VLL76_04540"
     CDS             1662..3011
                     /gene="glmU"
                     /locus_tag="VLL76_04540"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HSV28797.1"
                     /translation="MSNRKLAVIVLAAGLGTRMKSDLPKVMHPLAGRPMVQHLMDTIG
                     GLKPEKVVVVIGPGMDQVAQAVSPAVTVLQHDRLGTAHAVKQAKDALGEFDGDVLVLY
                     GDTPLITPETLDRMLAERRGPKHPAVVVLGFKPADPAHYGRLVVGAEGLKAIVEWKDA
                     TGEQRDIPLCNSGVMAIDGSRLWSLIERVGNANAKGEYYLTDIVGLARGDGVCCSFVM
                     GEESEVLGVNSRLELAAAEAIVQNRLRARAMENGATLIDPASVTFSWDTVLGRDVTVW
                     PNVVFFPGVTIGDRVTIKGFCHFERCSVGDGAELGPFARLRPGAELGEDVHVGNFVEI
                     KKASVEKGAKVNHLTYIGDARVGAGANIGAGTITCNYDGFNKFFTDIGEGAFIGSNSS
                     LVAPVKVGDRAIVGAGSVITKEVTAGALAVERASQMELAGWADRFRDRKRAEKPAKK"
     gene            3050..4873
                     /gene="glmS"
                     /locus_tag="VLL76_04545"
     CDS             3050..4873
                     /gene="glmS"
                     /locus_tag="VLL76_04545"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSV28798.1"
                     /translation="MCGIVGIIGKGDVAHLLVDGLRRLEYRGYDSAGIATLVDGRIER
                     RRAEGKLMNLERLLFQTPVPGTIGIGHTRWATHGVPNEANAHPHATERVAVVHNGIIE
                     NFSELKAELTAAGHKFESDTDSEAVAQLIDHHLRQGKSPEEATAAALKRLQGAFALGI
                     IFAGHHDLMIAAREGSPLAIGYGNGEMFLGSDALALAPLTQKISYLADGDWAVMRPDG
                     VTIRDREGRLVNREVRQSQMSGALIGKGQYRHFMLKEIYEQPQVIGDTLNAMLNPAKG
                     TITLPDLPFDIGAVERVHIIACGTSYYASLVAKYWIEKLARVPVEVEIASEFRYRDPV
                     LAPGGLGIFISQSGETADTLAALRWCRDHEQHTLSVVNVAESTIARESAGTILSLAGP
                     EIGVASTKAFTTQLVILASLAITMARAKGRIGAEEEARLSQAMAEVPAKVAEVLRHAN
                     KLQEIADSIAQARDVLYLGRGTGYPIALEGALKLKEVSYIHAEGYAAGELKHGPIAMI
                     DDNVPVIVICPSDELYEKTASNVQEVIARGAKVVFLSDKQGQAKLAAKPMATFEMPDC
                     DPFVSPILYALPVQLIAYHVAIAKGTDVDQPRNLAKSVTVE"
     gene            4882..5060
                     /locus_tag="VLL76_04550"
                     /pseudo
     CDS             4882..5060
                     /locus_tag="VLL76_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848289.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            5296..>6027
                     /locus_tag="VLL76_04555"
     CDS             5296..>6027
                     /locus_tag="VLL76_04555"
                     /inference="COORDINATES: protein motif:HMM:NF028434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HSV28799.1"
                     /translation="MAKKVLICVSQHGFWAEELLEPVRHLDAAKIGYEFIVNKAGRIP
                     FPDEASLDPTYVDPPLGRPVTSQEMARRAAEEDWGKWFADAKVLEDLFPVRPYLSAPN
                     YLAALETYYEDRQNAWRLVDGYDALLLVGGSGPVVDMVNNPRLHDLILGFYYADKPIA
                     AECYTVTCLAFAREFDDRKCILAGRHVTGHTMEYDYTTGWALKANGDWLVYDAPPYPL
                     EYILRDAVGPEGQFHGNVGRELSVIV"
BASE COUNT         1023 a         2023 c         2011 g          970 t
ORIGIN      
        1 gacaccagcc gttccagccg ctggcgcatg tccgacaggg cggcggtgcg caggtcgatc
       61 tccttttggg cgcggccgac gatgccgacc agccaggcca gcagcaacgt catcagcacc
      121 gccggcagcg cgatggcggg cagggcgttg agcagcagga tgcgatcgag gaagccggcg
      181 ggttcgtaga tttcgaaggc cagccgcacg gcgccgtcgt ggtccacgat ggggacatag
      241 aattcataga ccggggcgtc ggcgtccgaa gtgcgcaggg cgatcgcttc gccggtggtg
      301 atcgcgtcgc gcagttgcgg cgcggcctcc agtttgccca acttgtcggc ggccccgccg
      361 aggatcaagc gcccgctcgg ttcgtaaacc ttgaccttgg cgatgcgcgc gtcgctcaga
      421 acctcggcga aggccgcctg cagggcggcg gtggcggcgg ggtcgtgcag cagcgtcaac
      481 ggggcgtcga gcagcaggcg ccacgcctcg ggcgcttcgg cggccaccgc gccggcgatg
      541 acctcggcgc gcgagcgggc gatgttgaga tagacctcgc gggcgatcct ggtttcggcc
      601 agcccgccca gacccgccat cagggcgagg atcagcagga tcgccgggac gatccgccgc
      661 cgaaagatcc gctggagcgg gaaggggcgg tccatgcgca cgtcgatttc cgaatggtcc
      721 atgtcggcgt cctctgtcgc gatggcacct tttatgccat ccgctcgata aacgccgcat
      781 gaaccaacgc gcaggttata gccgacccat cgccgccggc aggtcctgga agcggtcgat
      841 cagcaggtcg ccgcccagtt cggccaccgg gatacgggtg tagccgaagg tcaccagcac
      901 caccggcagg ccggcgccct tggccgcctt cacgtcgttt tccgaatcgc cgacatacag
      961 cgtctcggcg tcgctgacgc ccagcttgtc cagcgtgatg cggacatggg tggggtccgg
     1021 cttgtggacc ggagtgtcgt cgccgccgac cacggcgtcg aaatagcgct cgatttccag
     1081 cgccgccagg atgcggcggg tggcgccgct gaccttgttg gtgcacaccg ccagcttcag
     1141 ccccttggcc ttgaggctgc gcagggtggc gatgacgccg ggataggggc gggtcaggtc
     1201 ggcggcatgg ggttcgtaat gggcgacgaa gcgggcgaca tagggcgcca ggtcgccctc
     1261 gggcacgccg ccggcggcgg tgaaggcgcg ccgcaccagc atgccgacgc cgtcgcccac
     1321 catggggccg acatcggcat cggcgagggc cggccttcct tcctcggcca gcagcttgtt
     1381 caccgcgacg gtcaggtcgg gaacgctgtg gatcagggtg ccgtccaggt cgaaaacgac
     1441 agctttgaag cgcgggggca tgggcggctc tccggggttc cttggaaggc gcatcatgcc
     1501 cgcgcggccg ccgcttgggt actacgcccc cggggggcgc cgacccgccc gcggcgggcg
     1561 gcgggctgta accaacggca acaaagattg actttgcccc atcccccttt tgtggcacct
     1621 tcgcgcccgg accgcaacag attgggtatt cccgtccttc catgtccaac cgcaagctgg
     1681 ccgtcatcgt tctcgccgct gggctcggca cccgcatgaa gtcggacctg cccaaggtca
     1741 tgcatcctct ggccgggcgg ccgatggtcc agcatctgat ggacaccatc ggcggcctga
     1801 agccggaaaa ggtggtggtc gtcatcggcc cgggcatgga ccaggtggcc caggcggtct
     1861 cgcccgccgt caccgtgttg cagcacgacc gcctgggcac cgcccacgcg gtgaagcagg
     1921 ccaaggacgc cctgggcgag ttcgacggcg acgtgctggt gctgtacggc gacaccccac
     1981 tgatcacgcc cgaaacgctg gatcgcatgc tggccgagcg ccgtggcccc aagcacccgg
     2041 cggtggtggt gctgggcttc aagcccgccg atccggccca ttacggccgc ctggtggtgg
     2101 gcgccgaggg cctcaaggcc atcgtcgaat ggaaggacgc caccggcgag cagcgcgaca
     2161 tcccgctgtg caattccggc gtgatggcca tcgacggctc gcggctgtgg agcctgatcg
     2221 agcgtgtcgg caacgccaac gccaagggcg aatactacct gaccgatatc gtcggtctgg
     2281 cgcgtggcga cggggtctgc tgctcgttcg tgatgggcga ggaatccgag gtgctgggcg
     2341 tcaactcgcg gctggaactg gccgccgccg aggccatcgt gcagaaccgc ctgcgcgccc
     2401 gcgccatgga gaacggcgcc accctgatcg atcccgccag cgtcaccttc tcgtgggata
     2461 ccgtgctggg gcgcgacgtc accgtgtggc cgaacgtggt gttcttcccc ggcgtcacca
     2521 tcggcgaccg cgtcaccatc aagggcttct gccatttcga gcgctgcagc gtcggcgacg
     2581 gcgccgagct tggcccgttc gcccgcctgc gccccggcgc cgagctgggc gaggacgtgc
     2641 atgtcggcaa cttcgtcgag atcaagaagg ccagcgtcga gaagggcgcc aaggtcaacc
     2701 acctgaccta tatcggcgac gcccgcgtgg gcgccggcgc caatatcggc gcgggcacca
     2761 tcacctgcaa ttacgacggc ttcaacaaat tcttcacgga catcggcgag ggtgccttca
     2821 tcggctcgaa ctcgtcgctg gtggcgccgg tgaaggtggg cgaccgtgcc atcgtggggg
     2881 cgggcagcgt catcaccaag gaggtcactg ccggagccct ggcggtcgag cgtgcctccc
     2941 agatggaact ggccggatgg gccgaccgct tccgcgaccg gaagcgcgcc gaaaagccgg
     3001 cgaagaagta agctattttt ctgcgcgaac tggggtagga gcgggacgca tgtgcggcat
     3061 cgtcggcatc atcggcaagg gcgacgtcgc ccaccttctg gtcgacggcc tgcgccgcct
     3121 ggaataccgg ggctatgact cggcgggcat cgccaccctg gtggacggcc gcatcgagcg
     3181 ccgccgcgcc gagggcaagc tgatgaacct ggaacggctg ctgttccaga ccccggtgcc
     3241 cggcaccatc gggatcggcc acacccgctg ggccacccac ggcgtgccca acgaggccaa
     3301 cgcccacccg cacgccaccg agcgcgtcgc cgtcgtccac aacggcatca tcgagaattt
     3361 ctcagagctg aaggcggaac tgaccgccgc cggccacaaa ttcgagagcg acaccgattc
     3421 cgaggccgtc gcccaactga tcgaccatca cctgcgccag ggcaaaagcc ccgaggaagc
     3481 caccgccgcc gcgctgaagc ggctgcaggg cgccttcgcc ttgggcatca tcttcgccgg
     3541 ccaccacgac ctgatgatcg ccgcgcgcga gggcagcccg ctggccatcg gctacggcaa
     3601 cggcgagatg ttcctgggct cggacgcgct ggcgctggcg cctctgaccc agaagatcag
     3661 ctatctggcc gacggcgact gggcggtgat gcggcccgac ggcgtgacca tccgcgaccg
     3721 cgagggccgg ctggtcaacc gcgaggtccg ccaaagccaa atgtcgggcg cgctgatcgg
     3781 caagggccag taccgccact tcatgctcaa ggaaatctac gagcagccgc aggtcatcgg
     3841 cgacaccctg aacgccatgc tgaacccggc caagggcacc atcacgctgc ccgacctgcc
     3901 gttcgacatc ggtgccgtcg agcgcgtcca catcatcgcc tgcggcacgt cctactacgc
     3961 ctcgctggtc gccaaatact ggatcgagaa gctggcccgc gtgccggtcg aggtggaaat
     4021 cgcctcggaa ttccgctatc gcgatcctgt gctggcgccg ggcggcctgg gcatcttcat
     4081 ctcgcaatcg ggcgagaccg ccgacaccct ggcggcgctg cgctggtgcc gcgatcacga
     4141 gcagcacacg ctttcggtgg tcaacgtcgc cgaaagcacc atcgcccgcg aatccgccgg
     4201 caccatcctc agcctggccg gccccgagat cggcgtcgcc tcgaccaagg ccttcaccac
     4261 ccagttggtg atcctggcgt cgctggccat caccatggcg cgcgccaagg gcaggatcgg
     4321 ggccgaggaa gaggcgcgcc tgagccaggc catggccgag gtccccgcca aggtggccga
     4381 ggtgctgcgc cacgccaaca agctgcagga aatcgccgat tccatcgccc aggcccgcga
     4441 cgtcctgtat ctgggccgtg gcaccggcta tcccatcgcc ctggaaggcg cgttgaagct
     4501 caaggaagtc agctacatcc acgccgaggg ctatgccgcc ggcgagctga agcacggccc
     4561 catcgccatg atcgacgaca acgtcccggt catcgtgatc tgcccgtccg acgagctgta
     4621 cgagaagacc gcctccaacg tccaggaagt catcgcgcgc ggcgccaagg tggtgttcct
     4681 gtcggacaag cagggtcagg ccaagctggc cgccaagccc atggcgacct tcgagatgcc
     4741 cgattgcgac cccttcgtct cccccatcct ctacgccctg ccggtccaac tgatcgccta
     4801 ccacgtcgcc atcgccaagg gcaccgacgt cgatcagccc aggaatttgg cgaaaagcgt
     4861 gacggtggag taggggaaga gatgtcgggg cttagtttgt tggcgaagga aggccggggc
     4921 caaggccagg gcgcggatta caagccctgg ctgaccgtcc gcgacgtacc gtcgcaagga
     4981 cgttcgcacc gcccgctggg catgaccaca ggtcgggtgc accatttctc tcggacatag
     5041 aggtcggttc cttcctgctg ttcgactggg cgcaggttcc cgcctatcgg cgccggccgc
     5101 tctcgcactt cgccgcggaa agccgccgcg cttccgacac cgccatgccg ccgtccttgg
     5161 aggaagattc ccaaggcagg tcaatgggtt tactactttc gatccggtag ttttctcgtg
     5221 gaggttggcg taccatcgat gccaaccctt ggtaggagcc gggcaagggg tgaatttcgg
     5281 ctggggaggg tgtcgatggc taagaaagtc ctgatttgcg tttcgcagca cgggttttgg
     5341 gccgaggaac ttctcgaacc cgttcgtcac ctcgatgcag cgaagatcgg gtacgaattc
     5401 atcgtcaaca aagccggcag gatccccttt cctgacgaag ccagcctgga tcccacttac
     5461 gtcgatcctc cgctcggccg cccggtgacg tcgcaggaaa tggcgcgtcg tgcggccgag
     5521 gaggactggg gcaaatggtt cgcggacgcg aaggtcctcg aggacctttt ccccgtacgt
     5581 ccgtatttgt cggcccccaa ctacctggcc gccctcgaga cctactacga ggatcggcag
     5641 aacgcttggc gcttggtcga tggctacgac gccctgttgc tcgtcggagg cagtgggccg
     5701 gtcgtcgaca tggtcaacaa tcctcgcctc cacgacctta tcctcggctt ctattatgcc
     5761 gacaagccga ttgccgcaga gtgctacacc gtcacctgtc tggcctttgc gcgggagttc
     5821 gatgatcgga agtgcatcct ggcggggcgg cacgtgaccg gccacacgat ggaatacgac
     5881 tacaccacgg gctgggcgct gaaggccaac ggcgactggc tggtctacga cgcgcctcct
     5941 tatccgctgg aatacatcct gcgcgacgct gtcgggcctg agggacagtt ccatgggaat
     6001 gtcggccgtg aactgtcggt gatcgtg
//
LOCUS       DATIKR010000291         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_149899, whole genome shotgun sequence.
ACCESSION   DATIKR010000291 DATIKR010000000
VERSION     DATIKR010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149899"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VLL76_04560"
     CDS             <1..576
                     /locus_tag="VLL76_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RQC domain-containing protein"
                     /protein_id="HSV28800.1"
                     /translation="QKAMSAILRTGQRFGTEHLINILVGNKSDQVLQYGHDRLPTFEV
                     GANRSRNEWRSIFRQLYAAGLIWMDFTEHGRWTLTEEGSHVLRGKAQVQLRVDALGKK
                     DRKRRGGMAPVDIGRADPDLLSALKSLRLSLAVAEGVPAYVVFPDRTLIEMASVKPAT
                     LDEMAGIHGVGQAKLARFGRQFLEAITALSP"
     gene            777..1130
                     /locus_tag="VLL76_04565"
     CDS             777..1130
                     /locus_tag="VLL76_04565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28801.1"
                     /translation="MGTTARLMPGHDPHWREKLDQAKARQAELLRREGLLSKAEQSEL
                     LALRAAIDKAFNSSFRTTQEYRDFYFARARELLDAEGIDMPLPCVPDDAPVEEIDRVL
                     NIVWHAVEVTNSETF"
     gene            complement(1132..>1596)
                     /locus_tag="VLL76_04570"
     CDS             complement(1132..>1596)
                     /locus_tag="VLL76_04570"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990204 - oxidoreductase complex
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HSV28802.1"
                     /translation="AEPDPDGLRELAENLGVAVRHRLGRSLAIREIDAGSCNGCELEI
                     HAVNNPVYDLERFGIKFVASPRHADVLLVTGPVSWNMAEALKRTVDATPAPKWVVAMG
                     DCAKDGGCFAGSYAVANGVHNIVPVDLHIPGCPPSPKQILGGLMALLESVSG"
BASE COUNT          272 a          547 c          521 g          256 t
ORIGIN      
        1 cagaaggcca tgagcgccat cctgcgcacc ggccagcgct tcggcaccga gcatctgatc
       61 aacatcctgg tcggcaacaa gtcggaccag gtgctgcaat acggccatga ccgcctgccc
      121 accttcgagg tcggcgccaa ccgttcgcgc aacgaatggc gctcgatctt ccgccagctc
      181 tacgccgccg gcctgatctg gatggatttc accgagcacg gccgctggac cctgaccgag
      241 gaaggcagcc acgtgctgcg cggcaaggcg caggtccaat tgcgcgtcga tgccctgggc
      301 aagaaggaca ggaagcggcg cggcggcatg gccccggtgg acatcggccg cgccgacccc
      361 gacctgctgt cggccctcaa atcgctgcgc ctgagcctgg cggtggccga gggcgtgccg
      421 gcctatgtgg tgttccccga tcgcaccctg atcgagatgg ccagcgtcaa gcccgccacg
      481 ctcgacgaaa tggccggcat ccacggcgtc ggccaggcca agctggcccg cttcggccgc
      541 cagttcctgg aggcgatcac ggccttgtca ccctgagagg tggtggccgc ccgtgcctga
      601 aagatgcttc gctgcgctca gcatgacacg acttttgttg tcatcctgag gcgcagccga
      661 aggatctttc agccgagatg gtagccgtcc ccgcccagct tcgacgacaa ggatggttgc
      721 agcccggtga cagccttgcc ggcctgggct atcctttctc gcggaggagt cgacgcatgg
      781 gcaccaccgc gaggctgatg ccgggtcacg acccgcattg gcgcgaaaaa ctggaccaag
      841 ccaaggcgcg gcaggccgaa ttgctgcgcc gcgaggggct gttgagcaag gccgagcagt
      901 ccgaactgct ggccctgcgc gccgccatcg acaaggcgtt caattccagc ttccgcacca
      961 cccaggaata ccgcgacttc tatttcgccc gcgcccgcga attgctggac gccgaaggca
     1021 tcgacatgcc cctgccctgc gtccccgacg acgccccggt cgaggagatc gaccgggtgc
     1081 tgaacatcgt ctggcacgcg gtcgaagtga cgaattccga gactttctag gctacccgga
     1141 aacactctcc agcagcgcca tcaagccgcc caggatctgc ttggggctgg gcgggcagcc
     1201 ggggatgtgc aggtccaccg ggacgatgtt gtggacgccg ttcgccaccg cgtaggagcc
     1261 ggcgaagcag ccgccgtcct tggcgcaatc gcccatggcg accacccatt tcggcgccgg
     1321 ggtggcgtcg accgtgcgct tcaacgcttc ggccatgttc caactgaccg ggccggtcac
     1381 cagcagcacg tcggcatggc gcgggctggc gacgaacttg atgccgaagc gttccaggtc
     1441 gtagaccggg ttgttgacgg cgtgaatctc cagttcgcag ccgttgcaac tgccggcgtc
     1501 gatctcgcgg atggccaggc tgcggcccag ccggtggcgc acggcgacgc ccaagttctc
     1561 ggccagttcg cgcaagccgt cggggtccgg ctcggc
//
LOCUS       DATIKR010000292         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_197942, whole genome shotgun sequence.
ACCESSION   DATIKR010000292 DATIKR010000000
VERSION     DATIKR010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197942"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1040
                     /locus_tag="VLL76_04575"
     CDS             <1..1040
                     /locus_tag="VLL76_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28803.1"
                     /translation="LTESPAQPLRRHLQPSPPPPPKPPEPMRASLKPSVPHPPKPVHK
                     ATKPAEPARPLAAPSGLISEDEAKMRPAPEWQVLRVDRATSDALLDGDRPLPPDTRLS
                     MLWRPTWSAAGEVIGVYRAYIQRHDADNETPLEGTQAYSDSGATAQALDRFGIAATMR
                     AFRAAEADGHGAVLVLPIHWATLHAQLRMELLAPMADVTAASRKARLVVELFGIPGRV
                     TSDEVAESIQTLRPLCREVVLRSQLGAVNGLAAARSGASMVGVDLADLGPSERIDDDH
                     LLARLLEFRTQAAQAGMGSFVWGARRRKVVMGTVTGGFSMVNGPALMKDIARPAKVVP
                     APRARFAATTV"
     gene            1108..1290
                     /locus_tag="VLL76_04580"
     CDS             1108..1290
                     /locus_tag="VLL76_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28804.1"
                     /translation="MGLPQRTTGPLESLDRILHRLIDMVTGEHEHEHAETVEEAIRRI
                     EDRLPPPTPPGGEAGA"
     gene            complement(1304..1618)
                     /locus_tag="VLL76_04585"
     CDS             complement(1304..1618)
                     /locus_tag="VLL76_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28805.1"
                     /translation="MAVTEAVSAVQKIVGAVNDVDSITASIASSAEQQSAATGEISRN
                     VGEAAHGAQEVTGNISGVMRASEETGSASSVVLQSANELAQQSASLSHEVEAFLAEIR
                     AA"
BASE COUNT          246 a          628 c          572 g          256 t
ORIGIN      
        1 gcctgaccga aagcccggcc cagccgctgc gccgccattt gcagcccagc ccgccgccgc
       61 cgcccaagcc gcccgagccc atgcgggcgt cgctgaagcc cagcgtaccg catccgccca
      121 agccggtgca caaggccacc aagccggcgg aacccgccag gccgttggcg gcgccgtcgg
      181 ggctgatttc cgaggacgaa gccaagatgc ggccggcgcc ggaatggcag gtgctgcggg
      241 tggaccgcgc cacgtcggac gcgctgctcg acggcgaccg gccgctgccg cccgacaccc
      301 ggctgtccat gttgtggcgc ccgacctggt ccgccgccgg cgaggtcatc ggcgtctatc
      361 gcgcctatat ccagcgccac gacgccgaca acgagacgcc gctggaaggc acccaggcct
      421 atagcgacag cggcgccacc gcccaggcgc tggaccgctt cggcatcgcc gccaccatgc
      481 gcgccttccg cgccgccgag gccgacggcc atggcgccgt actggtgctg ccgatccact
      541 gggcgacgct gcacgcgcaa ttgcgcatgg aattgctggc gcccatggcc gacgtcaccg
      601 ccgcctcgcg caaggcccgg ctggtggtcg agctgttcgg cattccgggc cgcgtcacct
      661 cggacgaggt ggcggaatcg atccagacgc tgcggccgct gtgccgcgag gtggtgttgc
      721 gttcgcagct gggcgccgtc aacggcctgg ccgccgcacg cagcggcgcc tcgatggtag
      781 gcgtcgacct ggccgacctt ggccccagcg aacgcatcga cgacgaccac ctgctggccc
      841 gcctgctgga attccggacc caggcggcgc aggccggcat gggcagcttc gtgtggggcg
      901 cgcgccgtcg caaggtcgtc atgggcaccg tcaccggcgg cttttccatg gtcaacggcc
      961 ccgccttgat gaaggacatc gcccggccgg ccaaggtcgt gcccgcccct cgcgcccgct
     1021 tcgccgccac aaccgtttga cgtacccccc gctttctgcg ttatatttcg tttacaacat
     1081 ttcgtcccgc gatgggggag tggggaaatg ggtttgccgc aaaggaccac cggcccgctg
     1141 gagtcgctgg acaggattct gcaccgcctg atcgacatgg tcaccggcga gcacgagcac
     1201 gagcacgccg aaacggtcga ggaagccatc cgccgcatcg aggaccgcct gccgcccccg
     1261 accccgcccg gaggcgaggc gggggcgtag cgcgccccgg cggttacgcc gcccggattt
     1321 ccgccaggaa ggcctcgacc tcgtgggaca ggctggcgga ttgctgcgcc agttcgttgg
     1381 ccgattgcag caccaccgac gaggccgagc cggtttcctc ggacgcccgc atgacgcccg
     1441 agatgttgcc cgtcacttcc tgggcaccat gggctgcctc gccgacattg cgcgagatct
     1501 cgccggtcgc ggccgattgc tgctcggccg acgaggcgat cgaggcggtg atgctgtcga
     1561 cgtcgttgac ggcaccgacg atcttctgca ccgcgctgac cgcctcggtg accgccatct
     1621 ggatggtgcc gacctggctg ccaatctctt aggtcgcctt ggcggtctgg ttggccaggc
     1681 tcttgacctc gttggcgacc ac
//
LOCUS       DATIKR010000293         2496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_41161, whole genome shotgun sequence.
ACCESSION   DATIKR010000293 DATIKR010000000
VERSION     DATIKR010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41161"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1574
                     /gene="infB"
                     /locus_tag="VLL76_04590"
     CDS             <1..1574
                     /gene="infB"
                     /locus_tag="VLL76_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HSV28806.1"
                     /translation="KKGFEVEEYIPDVEVDESKLVIRPPVVTVMGHVDHGKTKLLDAI
                     RKANVIASEFGGITQHIGAYQVTMRSGGKITFIDTPGHEAFTAMRARGAKVTDIVVLV
                     VAADDGIMPQTVEAIRHAKAAGVPIIVAINKIDKPDANPDRVRQELLQHELVTEDLGG
                     DVLTVEVSAKKRMNLEKLEETILLQSEILDLKANPGRAAQGTVVEAKMEKGRGPVATV
                     LVQKGTLRVGDVFVAGSEWGKVRALVDDHGNRVEEAGPSTPVEVLGLDGVPAAGDDFI
                     AVEDEARAREISGYRQRQDREAKAKLAARGTLEQMFSAIQAGEAKELPVVIKGDVQGS
                     IEAINGTVTKIGNDDVKVRVLHSAVGAVNESDITLAKASGGIIIGFNVRANPQAREMA
                     RRDGVDIRYYSIIYDVTDDLKKMLSGMLAPTLRERFLGYAEIREVFSITKVGKVAGCR
                     ITEGQVKRGAKVRLLRDNVVIHEGELSQLKRFKDDVKEVQEGYECGMSFANYDDIRQG
                     DVIECFDVEEVAATL"
     gene            1600..2043
                     /gene="rbfA"
                     /locus_tag="VLL76_04595"
     CDS             1600..2043
                     /gene="rbfA"
                     /locus_tag="VLL76_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HSV28807.1"
                     /translation="MPRGHKPPSQRQLRVGEELRHIVAQIIERGDFRDPDLAGRAITV
                     TEVRVSPDLRNATVFIVPLGGGEVAPILAGLKRAKAFLRHEVAQAINLRTVPDFWFEP
                     DTSFDEASRIDALLRSPTVRRDLGGDSEFERRYDPDAAEGEDDGQ"
     gene            2140..>2496
                     /locus_tag="VLL76_04600"
     CDS             2140..>2496
                     /locus_tag="VLL76_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015467436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HSV28808.1"
                     /translation="MARKRKGTPIDGWLAIDKPVGIGSTQVVAAVRRILGAAKVGHGG
                     TLDPLASGVLPIALGEATKTVQWVMDGAKTYRWQVRWGEATTTDDREGEICATSDKRP
                     TRDEILAALPAFLGNIE"
BASE COUNT          474 a          851 c          822 g          349 t
ORIGIN      
        1 agaagaaggg cttcgaggtc gaggagtaca tccccgacgt cgaggtcgac gagtcgaagc
       61 tggtcatccg gccgccggtc gtgaccgtca tgggccacgt cgaccacggc aagaccaagc
      121 tcctggacgc catccgcaag gccaacgtca tcgcgagcga gttcggcggc atcacccagc
      181 acatcggcgc ctatcaggtg accatgcgct cgggcggcaa gatcaccttc atcgacaccc
      241 ccggccacga agccttcacc gccatgcgcg cccgcggcgc caaggtgacc gacatcgtgg
      301 tgctggtggt ggcggccgac gacggcatca tgccgcagac ggtggaagcc atccgccacg
      361 ccaaggcggc cggcgtgccg atcatcgtcg ccatcaacaa gatcgacaag cccgacgcca
      421 atcccgaccg cgtccgccag gagctgctgc agcacgaact ggtgaccgag gatctgggcg
      481 gcgacgtgct gaccgtggaa gtctcggcca agaagcggat gaacctcgaa aagctcgagg
      541 agaccatcct gctgcagtcc gaaatcctgg acctcaaggc caacccgggg cgcgccgccc
      601 agggcaccgt ggtcgaggcc aagatggaaa agggccgcgg cccggtcgcc accgtcctgg
      661 tccagaaggg cacgctgcgc gtcggcgacg tcttcgtggc cggctcggaa tggggcaagg
      721 tgcgcgcgct ggtcgacgac cacggcaacc gcgtcgagga agccggcccg tcgactccgg
      781 tcgaggtgct gggcctggac ggcgttcccg ccgccggcga cgacttcatc gcggtcgagg
      841 acgaagcccg cgcccgcgag atctcgggct accgccagcg ccaggaccgc gaggccaagg
      901 ccaagctggc cgcgcgcggc acgctggagc agatgttctc ggcgatccag gccggcgagg
      961 ccaaggaact gccggtcgtc atcaagggcg acgtgcaggg ctcgatcgag gccatcaacg
     1021 gcaccgtcac caagatcggc aacgacgacg tcaaggtccg cgtgctgcat tcggcggtgg
     1081 gtgcggtcaa cgaatccgac atcaccctgg ccaaggcttc gggcggcatc atcatcggct
     1141 tcaacgtccg cgccaacccg caggcgcgcg agatggcgcg tcgcgacggc gtcgacatcc
     1201 gctactactc gatcatctac gacgtgaccg acgatctgaa gaagatgctg tcgggcatgc
     1261 tggcgcccac cctgcgcgag cggttcctcg gctacgccga gatccgcgag gtgttctcga
     1321 tcaccaaggt cggcaaggtc gccggctgcc gtatcaccga gggccaggtc aagcgcggcg
     1381 ccaaggtccg cctgctgcgc gacaacgtcg tcatccacga gggcgagctg tcgcagctca
     1441 agcgcttcaa ggacgacgtc aaggaagtgc aggagggcta cgagtgcggc atgtcgttcg
     1501 ccaattacga cgacatccgc cagggcgacg tgatcgagtg cttcgacgtc gaggaagtgg
     1561 ccgccaccct gtaaagggtg gcccacgccg gaggtatcca tgcccagggg ccacaagcca
     1621 ccgtcccagc gccagctgcg ggtcggcgag gaactgcgtc acatcgtcgc gcagatcatc
     1681 gaacgcggcg acttccgcga tcccgacctg gccggccgcg ccatcaccgt gaccgaggtg
     1741 cgggtcagcc ctgacctgcg caacgccacc gtcttcatcg tcccgttggg cggcggcgag
     1801 gtggcgccga tcctggccgg gctcaagcgc gccaaggcgt tcctgcgcca cgaggtcgcc
     1861 caggccatca acctgcgcac cgtccccgat ttctggttcg agcccgacac cagcttcgac
     1921 gaggccagcc gcatcgacgc cctgctgcgc tcgcccacgg tccgtcgcga cctgggcggc
     1981 gattccgaat tcgagcgccg ctacgacccc gacgcggccg aaggcgaaga cgacgggcag
     2041 taaacaattt caagacacag atgaacacag ataaacacag atagatcaat catctgagtt
     2101 catctgtgtt tatctgtgtc tcaattcttg gacctctcca tggcccgtaa gcgcaaaggc
     2161 acccccatcg atggctggct ggcgatcgac aagccggtcg ggatcggctc gacccaggtg
     2221 gtcgcggcgg tgcgccgaat cctgggtgcg gccaaggtcg ggcacggcgg cacgctggac
     2281 ccgctggcct cgggcgtgct gcccattgcc ttgggcgaag cgaccaagac ggtgcaatgg
     2341 gtgatggacg gcgccaagac ctatcgctgg caggtgcgct ggggcgaggc caccaccacc
     2401 gacgaccgcg agggcgaaat ctgcgccacc agcgacaagc gccccacccg cgacgagatc
     2461 ctggcggcgc tgcccgcctt cctgggcaac atcgag
//
LOCUS       DATIKR010000294         2872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_101136, whole genome shotgun sequence.
ACCESSION   DATIKR010000294 DATIKR010000000
VERSION     DATIKR010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101136"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VLL76_04605"
     CDS             complement(<1..317)
                     /locus_tag="VLL76_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HSV28809.1"
                     /translation="MRDPVITTIPVWDLPVRLFHWLLVALIGALWASGEFGKLDLHML
                     LGKAALALIVFRLAWGVAGSRTARFTDFVKGPRAIAEYLRRPYAVVGHNPLGALSVLA
                     LLTL"
     gene            462..1388
                     /locus_tag="VLL76_04610"
     CDS             462..1388
                     /locus_tag="VLL76_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSV28810.1"
                     /translation="MSRSIFIALIGFAVAAIAVALFLSQEPAERAAPLAIQAPPPAAT
                     AADSRNPSFDVVRIGEGGDAVIAGRALPKAEVVILDGGAEIGRVIADDRGEWVFVPDL
                     PMASGARQLTLEARNPDGSVTRSGAPVILVVPERAGGQPAIALKAGQDGAKLLQGPAA
                     ADGAGPLSIDIVDHDDAGGLFVGGRAQAGARVQLYLDNRLLGRAIADDDGGWKVSGKA
                     PAKGANHMLRADQVDDKGKVAFRVEIPYDAGMEVAAPGTVVVRPGNSLWRIARRLYGD
                     GPAFTVIYKANKDRIRDPDKIYPGQVFNVPGR"
     gene            complement(1369..1872)
                     /locus_tag="VLL76_04615"
     CDS             complement(1369..1872)
                     /locus_tag="VLL76_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28811.1"
                     /translation="MSNIQSLHLGGTDLPDIEALEALPSTGGVSTFDFTYHGIRFAAR
                     AEDFGDGEARLKLVGDIGPVPFSAEAPVARLGMAHIMMHANNLLGQRFRMADGRLLFG
                     AAAPLATPVTATNLVTSAAGLLIPASPYFDLLAVYMEPGVGIRPEWRRGRQPAPKSRP
                     ALTAPAR"
     gene            1996..2706
                     /locus_tag="VLL76_04620"
     CDS             1996..2706
                     /locus_tag="VLL76_04620"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HSV28812.1"
                     /translation="MVQAQEITMAKYFWTPVHREGWPFIALFAVGAALLGLVWAPLGW
                     LGLVATVWCVYFFRNPDRVTPTRAGLVISPADGVVCMVGHAVPPAELGMGSEPRMRVS
                     VFMSVFDVHVNRVPLDGRIVKIAYKPGKFVNAALDKASEDNERMAVRMELPDGREVAF
                     VQIAGLVARRIKCDLAEGQEVAAGQRFGLIRFGSRVDVYLPDGVAPQVACGQRTLAGE
                     TVLADIASAEPAREGEVR"
     gene            2706..>2872
                     /locus_tag="VLL76_04625"
     CDS             2706..>2872
                     /locus_tag="VLL76_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol O-phosphatidyltransferase"
                     /protein_id="HSV28813.1"
                     /translation="MFRPKRAARIRPPRIPGLSINRLIPNILTLLALCAGLTSIRFGL
                     HGKWEPAVVAIV"
BASE COUNT          423 a          976 c         1046 g          427 t
ORIGIN      
        1 agcgtcagca gcgccagcac gctcagcgcc cccagcggat tgtggccgac gacggcatag
       61 ggccgccgca ggtattccgc gatggcgcgc ggccccttga cgaaatccgt gaagcgggcg
      121 gtgcggctgc cggccacgcc ccaggccagg cggaacacga tcagcgccag cgccgccttg
      181 cccagcagca tgtgcaggtc gagcttgccg aactcgccgc tggcccacag ggcgccgatc
      241 agcgccacca gcagccagtg gaacaggcgg acgggaaggt cccagacggg gatggtggtg
      301 atgaccgggt cgcgcatggc gggcaggctc ctttcgccac gaattttcca gcccggcggc
      361 aaggggtcaa cccacgcggg tgggatgctg gtctgcatcg ggttgcgggc gcgggcgcaa
      421 ggcgttaggg taccgccttt ccgccaccgc cccgaggaac cgtgtcccgg tccatcttca
      481 tcgcgctgat cggctttgcc gtggccgcaa tcgccgtcgc cctgttcctg tcgcaggagc
      541 cggccgaacg tgccgcgccg ctggccatcc aggctccgcc gcccgccgcg acggcagccg
      601 acagccgcaa tccgtcgttc gacgtggtgc gcatcggcga gggcggcgac gcggtgatcg
      661 ccggccgcgc cctgcccaag gccgaggtgg tcatcctgga cggtggcgcc gagatcggcc
      721 gcgtgatcgc cgacgaccgg ggcgaatggg tgttcgtgcc cgacctgccc atggcctcgg
      781 gcgcccgcca attgaccctc gaggcccgca atcccgacgg cagcgtcacc cgctcgggcg
      841 cgccggtgat cctggtggtg ccggaacggg ccggcggcca gccggccatc gcgctcaagg
      901 ccggccagga cggggccaaa ctgctgcaag ggccggcggc ggccgatggt gccgggccgc
      961 tcagcatcga catcgtcgac catgacgatg ccggcggact gttcgtcggc ggccgcgccc
     1021 aggcgggagc gcgggtgcag ctttacctcg acaaccgcct gctgggacgc gcaattgccg
     1081 acgacgacgg cggctggaag gtgtccggca aggcgcccgc caagggcgcc aaccacatgc
     1141 tgcgcgccga ccaagtggac gacaagggca aggtggcgtt ccgggtcgag atcccctacg
     1201 acgccggcat ggaggtggcg gcgccgggta ccgtggtggt gcgtccgggc aactcgctgt
     1261 ggcgcatcgc gcgccggctt tacggcgacg gtccggcctt cacggtgatc tacaaggcca
     1321 acaaggaccg catccgcgat cccgacaaga tctatcccgg gcaggttttc aacgtgccgg
     1381 ggcggtgagg gccgggcgcg acttgggcgc cggctggcgg ccgcgccgcc attccggccg
     1441 gatgccgacg cccggttcca tgtagacggc caacaggtcg aaatagggcg aggcgggaat
     1501 cagcaggccg gccgccgagg tcaccaggtt ggtcgcggtg accggagtgg ccaagggggc
     1561 cgcggcgccg aacagcaggc ggccgtcggc catgcggaag cgctgtccca gcaggttgtt
     1621 ggcgtgcatc atgatgtgcg ccatgcccag ccgggccacc ggcgcctcgg ccgagaacgg
     1681 caccgggccg atgtcgccga ccagcttgag gcgggcctcg ccgtcgccga aatcctcggc
     1741 gcgggcggcg aagcggatgc cgtggtaggt gaagtcgaag gtgctgacgc cgcccgtcga
     1801 gggcagcgcc tcgagcgctt cgatgtcggg aaggtcggtg ccgccaaggt gcagggactg
     1861 gatgttcgac atctgaccgg tttgggattg ggtttgttgg gcgcgagact aacacgtcgc
     1921 cctttgcgtt tgaactggga acggtgtggg gattaagctg cccgccggct ccgattacga
     1981 ctagaccaag agggcatggt gcaggctcaa gaaatcacga tggcgaaata tttttggacg
     2041 cccgttcacc gcgagggatg gccgttcatc gcgctgttcg cggtcggcgc cgcgctgctg
     2101 ggcctcgtct gggcgccgct gggctggctg ggcctggtgg cgaccgtgtg gtgcgtctat
     2161 ttcttccgca atcccgaccg cgtcaccccc acccgcgcgg gcctggttat cagcccggcc
     2221 gacggcgtcg tctgcatggt cggccacgcg gtgccgccgg ccgaattggg catgggctcg
     2281 gaaccgcgca tgcgggtgtc ggtgttcatg agcgtgttcg acgtgcatgt gaaccgcgtg
     2341 cccctggatg gccggatcgt gaagatcgcc tacaaacccg gcaagttcgt caacgccgcc
     2401 ttggacaagg ccagcgagga taacgagcgc atggccgtgc gcatggaact gcccgacggc
     2461 cgcgaggtcg ccttcgtgca gatcgccggc ctggtggcgc ggcgcatcaa gtgcgacctg
     2521 gccgagggcc aggaggtggc ggccggccag cgcttcggcc tgatccgctt cggctcgcgc
     2581 gtcgacgtct acctgcccga cggcgtggcg ccccaggtcg cctgcggcca gcgcaccctc
     2641 gccggcgaga ccgtgctggc cgacatcgcg tccgccgaac ccgcccgcga gggcgaggtg
     2701 cgctgatgtt ccgccccaag cgcgccgcgc gcatccggcc gccccgcatc ccagggctgt
     2761 cgatcaaccg cctgatcccc aacatcctga cgctgctcgc cttgtgcgcc ggcctgacct
     2821 cgatccggtt cggcctgcac ggcaagtggg agcctgcggt ggtcgccatc gt
//
LOCUS       DATIKR010000295         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_234370, whole genome shotgun sequence.
ACCESSION   DATIKR010000295 DATIKR010000000
VERSION     DATIKR010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234370"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VLL76_04630"
     CDS             <1..285
                     /locus_tag="VLL76_04630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSV28814.1"
                     /translation="GSPKVGKLGPSKIGELPAAIRASVANLPAGRVAPPVDQPEGLLV
                     SMVCTREDATTVQLPSLEQVRRMIEEERLDMLTRRYLRDLRRSAFVDIRM"
     gene            290..1303
                     /gene="pdxA"
                     /locus_tag="VLL76_04635"
     CDS             290..1303
                     /gene="pdxA"
                     /locus_tag="VLL76_04635"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HSV28815.1"
                     /translation="MAKLTAVALTMGEPAGIGGDITLKAWLRRAEGLPVFFAIDDPGR
                     LRRLAARLGLDVPVTEIAAPSEAEAVFAAALPVLPQPLAVAVEPGRPDPANVEAVRQS
                     IARAVAFAQSGEAAALVTNPIHKGVMYQGGFRFPGHTEYLAHLLGLDGREVMMLACPE
                     LRVVPVTIHIALAEAVRTLRREDIVAIGRTTAQALRVDFGITAPRLAVAGLNPHAGED
                     GAMGREEIDLIAPAVAELRADGIDAFGPLPPDTMFHARARQRYDAALCMYHDQALIPI
                     KTVDFDGGVNITLGLPIVRTSPDHGTAFEIAGTGQANETSVMAALRQAAAIAANRKAA
                     AHG"
     gene            1296..>1739
                     /locus_tag="VLL76_04640"
     CDS             1296..>1739
                     /locus_tag="VLL76_04640"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HSV28816.1"
                     /translation="MAELPPLRDVIAAHGLAARKSLGQHFLFDLNLTGRIARAAGKLE
                     VGTCIEIGPGPGGLTRALLDAGARHVVAIERDDRAILIQREIADHYPGRLEILAADAL
                     EVDAATLGEAPRRIVANLPYNISTVLLLQWLRQATAFESMTLMFQA"
BASE COUNT          245 a          684 c          564 g          246 t
ORIGIN      
        1 ggttcgccca aggtaggcaa gctcggcccc agcaagatcg gcgagttgcc ggccgccatc
       61 cgggcgtccg tcgccaacct gccggccggc cgcgtcgccc cgcccgtgga ccagcccgaa
      121 ggcctgctgg tcagcatggt ctgcacgcgc gaggacgcga ccaccgtgca attgccgtcg
      181 ctggagcagg tgcgccgcat gatcgaggaa gagcgcctcg acatgctgac ccgccgttac
      241 ctgcgtgacc tgcgccggtc ggccttcgtc gacatccgga tgtgacgcga tggcaaagct
      301 gaccgccgtc gccctgacca tgggcgagcc ggccgggatc ggcggcgaca tcacgctgaa
      361 ggcgtggctg cgccgcgccg agggattgcc cgtctttttc gccatcgacg atcccggacg
      421 cctgcgccgg ctggccgccc gcctgggcct cgacgtcccg gtcaccgaga tcgccgcccc
      481 ctccgaggcc gaggcggtgt tcgccgccgc cctgccggtg ctgccccagc cgctggcggt
      541 cgcggtcgag ccgggccggc ccgatcccgc caacgtcgaa gcggtgcgcc aatccatcgc
      601 ccgcgccgtc gccttcgccc agtcgggcga ggccgccgca ttggtcacca accccatcca
      661 caagggggtg atgtaccagg gcggcttccg ctttcccggc cataccgagt acctggcgca
      721 cctgctgggc ctggacggcc gcgaggtgat gatgctggcc tgcccggaat tgcgggtggt
      781 gccggtcacc atccacatcg ccctggccga ggcggtccgc accctgcggc gcgaggacat
      841 cgtcgccatc ggccgcacca ccgcccaggc cctgcgggtc gatttcggca ttacggcgcc
      901 ccgtctggcg gtggccggcc tcaatcccca tgccggcgag gacggcgcca tgggccgcga
      961 ggaaatcgac ctgatcgccc ccgccgtcgc cgagctgcgc gcggacggca tcgacgcgtt
     1021 cgggccgctg ccgcccgaca ccatgttcca cgcccgcgcc cgccaacgct atgacgcggc
     1081 gctgtgcatg taccacgatc aggccctgat cccgatcaag accgtcgatt tcgacggcgg
     1141 cgtcaacatc accctgggcc tgcccatcgt gcgcacctcg cccgatcacg gcaccgcctt
     1201 cgagatcgcc ggcaccggcc aggccaacga gaccagcgtg atggcggccc tgcgccaggc
     1261 cgccgccatc gccgccaacc ggaaggccgc cgcccatggc tgagctgccg ccgctgcgcg
     1321 acgtcatcgc cgcccatggc ctggccgccc gcaagtcgct gggccagcat ttcctgttcg
     1381 acctcaacct gaccggccgc atcgcccgcg ccgccggcaa gcttgaggtc ggcacctgca
     1441 tcgagatcgg ccccggcccc ggcgggttga cgcgtgccct gctggatgcc ggcgcccgcc
     1501 atgtggtcgc catcgagcgc gacgaccgcg ccatcctgat ccaacgggaa atcgccgacc
     1561 attatcccgg ccgcctggaa atcctggccg ccgacgcgct ggaagtggac gccgccaccc
     1621 tgggcgaggc accgcgccgc atcgtcgcca acctgcccta caacatctcg accgtgctgc
     1681 tgctgcagtg gctgcgccag gccaccgcct tcgagagcat gacgctgatg ttccaggcc
//
LOCUS       DATIKR010000296         2630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_52649, whole genome shotgun sequence.
ACCESSION   DATIKR010000296 DATIKR010000000
VERSION     DATIKR010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52649"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(320..1519)
                     /locus_tag="VLL76_04645"
     CDS             complement(320..1519)
                     /locus_tag="VLL76_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV28817.1"
                     /translation="MSDKARAIALIALCEVMTLSLWFSATAVLPELKAQGGLDSFHAS
                     LFTSLVAVGFVCGTLTSALLGLADRWELHHFFRAAAWVAALANLGLLVFEPASPMVLA
                     CRFVTGFCMAGVYPVGMKMVSTWAKGDMGLLVGLLVGALTLGSGSPHLFNALGGLDWR
                     LTVALASGSAAVAGLLIGGARLGPNLAKAPPFQPGYVLEAWRNKPLRLANFGYLGHQW
                     ELYAMWAWLGAFLQASFAEQGVGTAWANAATFAVIGLGGAIGCLAGGLLADRWGRTTI
                     TMAAMAASGTCALLAGLVFGAHPGLVMAVCVVWGVTVVADSAQFSSSIIELSERSHIG
                     TMLTTQTCVGFLLTLVTIHLVPLLVAQVGWRWAFAGLAAGPYLGVVAMGALRRRPEAV
                     KLAGGRR"
     gene            complement(1516..2511)
                     /gene="cbiB"
                     /locus_tag="VLL76_04650"
     CDS             complement(1516..2511)
                     /gene="cbiB"
                     /locus_tag="VLL76_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HSV28818.1"
                     /translation="MLPLFTQFGHAPDALFILFLAIAVDAALGEMNWLFRHVPHPVVV
                     MGRAIAAFDKRLNRPERSESERKGRGVVLVAIMVTGAAAVGGLVTFVARTLPHAWIAE
                     VFVAATLIAQRGLFEHVNDVARALESKGLEAGRYAVSRIVGRDPQALDEHGVARAGIE
                     SLAENFSDAVVAPIFWYVLLGLPGLMIYKAVNTLDSMVGYRNDKYRAFGWASARLDDW
                     LNLIPARLAGLVIALAALFSAGARPWAALRTMVTDARHHKSPNSGWPEAAMAGALGLA
                     LGGPRKYPGLTVDEKWIGSGRARANVADMDKALLLFTVACVIDAGLVALLMWAQS"
BASE COUNT          482 a          952 c          879 g          317 t
ORIGIN      
        1 cccacggctg tccggtttag cttcggcccc cggcccccag actcgtcacc cccgcgaagg
       61 cgggggtcca tgggtccgcc cggctttgcc ctcaacccat tgtcccgccg ccattttttg
      121 cggcttccat ggatccccgc cttcgcgggg atgacgatga aggggggcgg atgggcaaac
      181 ctgtcccgca aagatcaaac cggctgagaa tggcgcagac cctggccttg ctgggcactg
      241 gccaaaatta aaccggacat ccgtgggtcg agcccggcga tgacgggaag gcgggcaggc
      301 agcaaagcgt cccagcccgc taacgccgcc cgccggccag tttgacagcc tcgggccggc
      361 gcctcagcgc ccccatcgcc accaccccga gataaggccc cgccgccagg ccggcgaagg
      421 cccagcgcca gcccacctgc gccaccagca gcggcaccag atggatggtc accagcgtca
      481 gcaggaagcc gacgcaggtt tgcgtcgtca gcatggtgcc gatatgcgag cgctcggaca
      541 gttcgatgat gctggacgag aactgcgccg aatcagcgac cacggtgacg ccccacacca
      601 cgcacaccgc catcaccagc ccaggatgcg cgccaaagac cagaccggcc aacagggcgc
      661 aggtgccgct ggccgccatc gccgccatgg tgatggtggt ccggccccag cggtcggcca
      721 gcaggccgcc ggccaaacag ccgatcgcgc cgcccaggcc gatcaccgcg aaggtggcgg
      781 cgttggccca ggccgtgccc accccctgct cggcgaaact ggcctgcagg aaggcgccca
      841 gccacgccca catggcgtaa agctcccact ggtggccgag atagccgaaa ttggccagcc
      901 tcagcggctt gttgcgccat gcctccagca catagccggg ctggaagggc ggcgccttgg
      961 cgaggttggg acccagccgc gccccaccga tcagcagccc ggcgacggcc gccgagccgg
     1021 atgccagcgc caccgtcagc cgccagtcca gcccgcccag ggcgttgaac agatgcggcg
     1081 accccgaccc cagggtcagg gcgccgacca gcaggccgac cagcaacccc atgtcgccct
     1141 tcgcccaggt ggacaccatc ttcatgccca ccggatagac gcccgccatg cagaagccgg
     1201 tgacgaagcg gcaggccagc accatgggcg aggccggctc gaacaccagc aggccgagat
     1261 tggcgagggc cgccacccag gccgccgcgc ggaagaagtg atgcagctcc caacggtcgg
     1321 ccagcccgag cagggcgctg gtcagcgtgc cgcacacaaa gcccaccgcc accagactgg
     1381 tgaacagcga ggcgtggaag ctgtccagcc cgccctgggc cttcaactcc ggcagcacgg
     1441 cggtggccga gaaccacagc gacagcgtca tcacctcgca cagggcgatc agggcgatgg
     1501 cgcgggcctt gtcgctcacg attgcgccca cataagcagc gccaccagcc cggcatcgat
     1561 gacgcaggcg accgtgaaca gcagtagcgc cttgtccatg tcggccacat tggcccgcgc
     1621 ccggccggag ccgatccact tctcgtccac cgtcaggccg ggatacttgc gcggcccgcc
     1681 cagggcgagg ccgagggcgc cggccatggc cgcctcgggc cagccggaat tggggctttt
     1741 gtggtggcgg gcatcggtga ccatggtgcg aagcgcggcc caaggccggg cgccggccga
     1801 gaacagcgcc gccaaggcga tgaccagacc ggcaaggcgc gccgggatca ggttcagcca
     1861 atcgtccagc cgggccgagg cccagccgaa ggcgcggtac ttgtcgttgc gatagcccac
     1921 catgctgtcc agcgtgttga ccgccttgta gatcatcagc cccggcaggc cgagcagcac
     1981 gtaccagaag atgggcgcca ccaccgcgtc ggaaaagttc tcggccaggg attcgatgcc
     2041 ggcccgcgcc accccgtgct cgtccagcgc ctgcgggtcg cggccgacga tgcgcgacac
     2101 ggcgtagcgc ccggcctcca gccccttgga ttccagcgcg cgggcgacgt cgttgacgtg
     2161 ctcgaacagg ccgcgttggg cgatcagggt ggcggcgacg aacacctcgg cgatccaggc
     2221 atgcggcagg gtgcgggcga cgaaggtgac cagcccgccg acggccgccg cgcccgtcac
     2281 catgatcgcc accaacacca cgccccggcc cttgcgctcg gattcgctgc gctcgggccg
     2341 gttcagccgc ttgtcgaagg ccgcgatggc gcggcccatg acgaccaccg gatgggggac
     2401 atgacggaac agccagttca tctcgcccag cgccgcgtcc accgcgatgg cgaggaacag
     2461 gatgaacagc gcgtcggggg cgtggccgaa ttgggtgaag agcggaagca tgcgggcagg
     2521 ataagggccg atttttggcc tgacaacttc gatgggggcg ctctatagtc cggcctcgca
     2581 ccgaccggcc ggaggcaagg accagccggc accaacgcaa gaaggcaagg
//
LOCUS       DATIKR010000297         5793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_222566, whole genome shotgun sequence.
ACCESSION   DATIKR010000297 DATIKR010000000
VERSION     DATIKR010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5793
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222566"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VLL76_04655"
     CDS             <1..198
                     /locus_tag="VLL76_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28819.1"
                     /translation="DVDMKVVVDGASTMSKSALRSLLSETKHAITDAIKAAGFIMPEE
                     PKARNGNQHQLRDLGTATRRL"
     gene            195..758
                     /locus_tag="VLL76_04660"
     CDS             195..758
                     /locus_tag="VLL76_04660"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HSV28820.1"
                     /translation="MTHATQLRPHVQLELTMSAHRLPTVRCEISSFVSEVAKRPPELR
                     WIECISVNETAAEKLVSLTRRTAGHLEGTRSDIVYDRWLVRHIYDLHHAIGHIDPDVV
                     TEVARTVALDDAEQFVAWYPDYQQDPSAWTLRAIDWLASSHESRVNYRRFLDEMVFGA
                     PVDYDEALASVADLARAMWKPEPSVAS"
     gene            complement(851..1291)
                     /locus_tag="VLL76_04665"
     CDS             complement(851..1291)
                     /locus_tag="VLL76_04665"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV28821.1"
                     /translation="MRFGIQSILAAAVVVGSASGALAQQKPEDTLKMRQGLFQAVKVQ
                     AGPVLGFAQGKNDMPADAAARGANVAALAKILPAAYGKGSENLPNSATKPEAFTSPDF
                     AKGLDAMGAAAAKLAAAQDADAVKAAAGELGKTCKGCHDNFKKD"
     gene            1459..2058
                     /locus_tag="VLL76_04670"
     CDS             1459..2058
                     /locus_tag="VLL76_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HSV28822.1"
                     /translation="MSRTRLPRLKSLCVFCGSSPGGDPRHREAAGRLGRAMAAEGIKL
                     VYGGGQLGLMGALAEAVMGGGGQVVGVMPEHLTRVEKAYDEITELHVVDSMHTRKRMM
                     FDMADAFAVLPGGMGTMDETFEILTWKQLRLHNKPILIVNQHGYWQPWLDMAGHIIGS
                     GFARPETEKLYAVVDDVDAVLPMAQAGLAHQVEGRPGLF"
     gene            2136..2747
                     /locus_tag="VLL76_04675"
     CDS             2136..2747
                     /locus_tag="VLL76_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28823.1"
                     /translation="MIKAILRGAAALAIPCLLWPVEAEASNEKPRPTSSQRELPHRKC
                     MKFEIPEDAAMIYRDTYVILIDGLKTNFQEFVSANGQGHDGTARIADANLAGGSGREL
                     RMNGLRLELEVPTGAKSVSVKFGATGGGLNLEVAGDLRHTADFRTLNRTQVGGARVNV
                     AAQNTASPRGHRGTISISTALTHPTRLAIGGQELSIDDLCVYY"
     gene            2945..5170
                     /locus_tag="VLL76_04680"
     CDS             2945..5170
                     /locus_tag="VLL76_04680"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HSV28824.1"
                     /translation="MTNAKIIWTKVDEAPALATYSLLPIVQAFTKAAGIAVETRDISL
                     AGRIIANFPENLSAEQRIGDELAELGELTLKPEANIIKLPNVSASVPQLKAAIKELQA
                     HGYNVPDYPEDPKTDAEKDIKARYGKVLGSAVNPVLREGNSDRRAAGAVKQYARNNPH
                     KMGAWTADSKSHVVHMSAGDFYGSEKSVTVAEPCTIRIELAAKDGSTTVLKEKTALKA
                     GEVIDAAVMSKSALRAFYAEQVADAKAKGVLMSLHLKATMMKVSDPIMFGHAVTVFFK
                     DVFAKHADAIKEIGVNVNNGFGDLLAKLDKLPADKKAAIEADIAAAYAAGPDLAMVNS
                     DKGITNLHVPSDVIVDASMPAMIRDSGKMWNKDGKLADTKAIIPDRCYAGVYQAVIDD
                     CKKHGAFDPKTMGTVPNVGLMAQKAEEYGSHDKTFEVPAAGTVRVVDAASGKVLLEQP
                     VEEGDIFRACQTKDAPIQDWVKLAVTRARLSNTPAVFWLDPKRGHDAQIIAKVEKYLK
                     DHDLSGLDIRIMTPEDACRFSLERIRKGQDSISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMAGGGLFETGAGGSAPKHVQQFQEEGYLRWDSLGEFLALGVSLEHLAQTFKN
                     PKAQVLADTLDQANGKILENNRSPARKVGELDNRGSHFYLALYWAQALAAQDKDAELK
                     ARFAPVAKALADNEAKINAELIAAQGKPVDMGGYYQPDVAKTSAAMRPSATLNQIVSA
                     T"
     gene            5258..>5793
                     /locus_tag="VLL76_04685"
     CDS             5258..>5793
                     /locus_tag="VLL76_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSV28825.1"
                     /translation="MKKIKVANPIVELDGDEMTRIIWKFIKDKLILPYLDVDLKYYDL
                     GIENRDATEDKVTVESAEAIKKYGVGVKCATITPDEARVKEFNLKKMWKSPNGTIRNI
                     LDGTVFREPIICKNVPRLVAHWDKPIIVARHAFGDQYRAAEFLFPGPGTLKLTFTPQN
                     GGPAIEKEVFQATSSGAA"
BASE COUNT         1140 a         1935 c         1824 g          894 t
ORIGIN      
        1 gacgtcgata tgaaggtcgt cgtcgatggg gcctccacga tgtccaagag tgccctgagg
       61 agcctgctga gcgaaaccaa gcacgccatc acggatgcga tcaaggcggc gggattcatc
      121 atgcccgagg aacccaaggc caggaacggc aaccagcatc aactacgaga tctgggtacg
      181 gcgacccgga gactataacc cacgccaccc agctccggcc tcatgtccaa cttgaactga
      241 ccatgtcggc ccacaggctg ccgaccgtcc gctgcgaaat atcctccttc gtctctgaag
      301 tcgccaaacg tccgcccgag ctgagatgga tcgagtgcat ctccgtcaac gagacggccg
      361 ccgagaagct cgtaagcctg accagacgca ccgctggaca cctggaaggc acccgatccg
      421 acatcgtata cgaccgctgg ctcgtcaggc atatctacga cctgcaccac gccatcggac
      481 acatcgaccc cgacgtcgtc accgaagtgg ctcgcaccgt tgccctggac gacgccgaac
      541 agttcgtcgc ctggtatcca gactaccagc aagacccaag tgcctggacc ttgcgcgcca
      601 tcgactggct ggccagcagc cacgagagcc gtgtcaacta ccgccgcttc ctggacgaga
      661 tggtctttgg cgccccagtg gattacgacg aagccctggc tagtgtcgcc gacctagctc
      721 gcgcaatgtg gaagccagaa ccaagcgtgg caagctgaca agttcgtgaa agtaaggaaa
      781 ggaggcgaat cggggcgccc tccacaccta ttgtaagccc cctcccgttg cgggaggggg
      841 cgcacagagg ttagtccttc ttgaaattgt cgtggcagcc cttgcaggtc ttgcccagct
      901 cgccggcggc ggccttgacg gcgtcggcgt cctgggcggc ggccagcttg gcggcggcgg
      961 cgcccatggc gtccaggccc ttggcgaagt cgggcgaggt gaaggcttcg ggcttggtgg
     1021 ccgagttcgg caggttctcg gagcccttgc cgtaggcggc cggcaggatc ttggccaagg
     1081 cggcgacatt ggcgccgcgg gcggcggcgt cggccggcat gtcgttcttg ccctgggcga
     1141 agccgagcac cgggccggcc tggaccttga ccgcctggaa caggccctgg cgcatcttca
     1201 gggtgtcttc cggcttctgc tgcgcgagcg cgcccgaggc cgagcccacc acgacagcgg
     1261 cggcgaggat gctctgaatg ccgaaacgca tgttctgttc cccttcgtct aatcattgcg
     1321 gcgcgctgcg ccaacccgat cggcatagcg cagccgctca ttggttgcaa caccactatc
     1381 cgtagggggt gtctacccct caacagccgc cgcctccgtg actatatcac ccagtccgag
     1441 ccaaacgcgg agacatcgat gtcgagaaca aggctgccga gactgaaatc cctgtgcgtg
     1501 ttctgcggat cgtcgccggg gggcgatccc cgccatcgcg aggcggcggg gcggctgggc
     1561 cgggcaatgg cggccgaagg catcaagctg gtctacggcg gcggtcaact agggctgatg
     1621 ggggcactgg ccgaggccgt catgggcggc ggcggccagg tggtgggcgt gatgcccgag
     1681 cacctgaccc gggtcgagaa ggcctatgac gagatcaccg agttgcatgt cgtcgattcc
     1741 atgcataccc gcaagcgcat gatgttcgac atggccgacg ccttcgccgt gctgcccggc
     1801 ggcatgggca ccatggacga gaccttcgag atcctgacct ggaagcagtt gcggctgcac
     1861 aacaagccca tcctgatcgt caaccagcac ggctattggc agccctggct ggacatggcc
     1921 ggccacatca tcggcagcgg cttcgcccgt cctgaaacgg aaaaactgta cgccgtggtg
     1981 gatgacgtcg atgccgtgct gccgatggcg caagcgggat tggcacacca ggtggagggg
     2041 cgcccagggc tgttttagat cgctttggtg gcgtttctcc cgatgatata ctggcggcgc
     2101 cccccgggga gggggcgctc gatttggggg gaaacatgat caaggcaatt ctgcgcggcg
     2161 cggccgcgct ggcgatcccg tgtcttttgt ggccggtcga ggccgaagcg tccaacgaaa
     2221 agccgcgccc gaccagcagc caacgcgagc tgccgcacag gaaatgcatg aagttcgaaa
     2281 ttcccgaaga cgccgccatg atctatcgcg atacctacgt gattctgatc gacggcctga
     2341 agaccaattt ccaggagttc gtgtcggcaa acggccaggg ccatgacggc acggcccgta
     2401 tcgccgacgc caacctggcc ggcggcagcg gcagggagtt gcggatgaat ggcctgcggc
     2461 tcgaactcga ggttccgacc ggcgccaaga gcgtcagcgt gaagttcggc gccaccggcg
     2521 gcggcttgaa cctggaagtg gccggcgacc tgaggcacac cgccgatttc cgcacgctga
     2581 accggacgca ggtgggtggg gcaagggtca acgtcgcggc gcagaacacc gcgtcgccgc
     2641 gcggccacag gggaaccatc tcgatcagca ccgcgttgac gcatccgacc cgccttgcca
     2701 tcggcggcca ggaattgtcc atcgacgatc tgtgcgttta ctattaaggc gagtgagggg
     2761 ctctggcatt tcgccagggc ccccgcccgt tccccgtcct aaggtgtagc attaccggct
     2821 tgcgttcgcc gcccgcaatg ctatcgtccc cggctgtccg gccgcgtgac cgcttcgacg
     2881 gtcgcgcgcg cgaagacatg gggcgcaccc atgcggatac ccaccgacgt caacggggat
     2941 ggaaatgact aacgcgaaaa tcatctggac caaggtcgac gaagcgccgg cgctcgccac
     3001 ctattccctg ctgccgatcg tccaggcgtt caccaaggcc gccggcatcg ccgtcgagac
     3061 ccgcgacatc tcgctggccg gccgcatcat cgccaatttc cccgagaacc tgtcggccga
     3121 gcagcgcatc ggcgacgaac tggccgaact gggcgagctg acgctcaagc ccgaggccaa
     3181 catcatcaag ctgcccaacg tcagcgcctc ggtgccgcag ttgaaggccg cgatcaagga
     3241 attgcaggcc cacggctaca acgtccccga ctatcccgag gaccccaaga ccgacgccga
     3301 gaaggacatc aaggcccgct acggcaaggt gctgggctcg gccgtgaacc cggtcctgcg
     3361 cgagggcaat tccgaccgcc gcgccgccgg cgccgtcaag cagtacgcgc gcaacaaccc
     3421 gcacaagatg ggcgcctgga ccgccgattc gaagtcgcac gtggtgcata tgagcgccgg
     3481 tgacttctat ggcagcgaga agtccgtcac cgtcgccgag ccctgcacga tccgcatcga
     3541 actggcggcc aaggacggca gcaccaccgt gctgaaggaa aagaccgcgc tgaaggccgg
     3601 cgaggtgatc gacgccgccg tcatgagcaa gagcgcgctg cgcgccttct atgccgagca
     3661 ggtggccgac gccaaggcca agggcgtgct gatgtcgctg cacctcaagg cgacgatgat
     3721 gaaggtctcg gaccccatca tgttcggtca cgccgtcacc gtcttcttca aggacgtgtt
     3781 cgccaagcac gccgacgcca tcaaggagat cggcgtcaac gtcaacaacg gcttcggcga
     3841 cctgctcgcc aagctggaca agctgccggc cgacaagaag gccgccatcg aggccgacat
     3901 cgccgccgcc tatgccgccg gccccgacct cgccatggtc aattccgaca agggcatcac
     3961 caacctgcac gtgccgtccg acgtgattgt cgacgcctcg atgccggcga tgatccgcga
     4021 ctcgggcaag atgtggaaca aggacggcaa gctggccgac accaaggcca tcatccccga
     4081 ccgctgctat gccggcgtct accaggcggt gatcgacgac tgcaagaagc acggcgcctt
     4141 cgatcccaag accatgggca ccgtccccaa tgtcggcctg atggcccaga aggccgagga
     4201 atacggcagc cacgacaaga ccttcgaggt tcccgccgcc ggcaccgtgc gcgtcgtcga
     4261 tgccgcctcg ggcaaggtgc tgctggagca gccggtcgag gaaggcgaca tcttccgcgc
     4321 ctgccagacc aaggacgcgc cgatccagga ttgggtcaag ctggccgtca cccgcgcccg
     4381 cctgtccaac accccggcgg tgttctggct ggaccccaag cgcggccacg atgcccagat
     4441 catcgccaag gtcgagaaat acctgaagga ccacgacctt tcgggcctcg acatccgcat
     4501 catgaccccc gaggacgcct gccgcttctc gctggagcgc atccgcaagg gccaggactc
     4561 catctcggtg accggcaacg tgctgcgcga ctacctgacc gacctgttcc cgatcctgga
     4621 gctgggcacc agcgccaaga tgctgtcgat cgtgccgctg atggccggcg gcggcctgtt
     4681 cgagaccggc gccggcggtt cggcgcccaa gcacgtccag caattccagg aagagggcta
     4741 cctgcgctgg gattccctgg gtgaattcct ggcgctgggc gtctcgctgg agcatctcgc
     4801 ccagaccttc aagaacccca aggcgcaggt tttggccgac accctggacc aggccaacgg
     4861 caagatcctc gagaacaacc gctcgccggc ccgcaaggtg ggcgagttgg acaaccgtgg
     4921 cagccacttc tatctggccc tctattgggc gcaggcgctg gccgcccagg acaaggacgc
     4981 cgagttgaag gcccgcttcg ctccggtcgc caaggcgctg gccgacaacg aggccaagat
     5041 caacgccgag ctgatcgcgg cccagggcaa gccggtcgac atgggcggct attaccagcc
     5101 cgacgtcgcc aagacctcgg ccgccatgcg ccccagcgcc accttgaacc agatcgtttc
     5161 cgccacttga gccgccgtca tccacaacct cgccgtcatg cccgggcttg acccgggcgt
     5221 ggcggaaagg gtcagcaaga cacagggaac caagaccatg aagaagatca aagtcgccaa
     5281 tccgatcgtg gaactcgacg gcgacgaaat gacccggatc atctggaagt tcatcaagga
     5341 caagctgatc ctgccgtacc tggatgtgga cctgaagtat tacgacctgg gcatcgagaa
     5401 ccgcgacgcc accgaggaca aggtcacggt ggaatcggcc gaggccatca agaagtacgg
     5461 cgtgggcgtc aagtgcgcca ccatcacccc cgacgaggcg cgggtgaagg agttcaacct
     5521 caagaagatg tggaagtcgc ccaacggcac catccgcaac atcctcgacg gcaccgtgtt
     5581 ccgcgagccg atcatctgca agaacgtgcc ccggctggtc gcccactggg acaaaccgat
     5641 catcgtggcg cgccatgcct tcggcgacca gtaccgggcc gccgaattcc tcttccccgg
     5701 gccggggacg ctgaagctga cctttacccc gcagaacggg ggcccggcga tcgaaaaaga
     5761 ggtgttccag gccacctcct ccggggcggc cat
//
LOCUS       DATIKR010000298         2883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_137989, whole genome shotgun sequence.
ACCESSION   DATIKR010000298 DATIKR010000000
VERSION     DATIKR010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137989"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VLL76_04690"
     CDS             <1..537
                     /locus_tag="VLL76_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV28826.1"
                     /translation="DPHIFLILALKANGMSTKDIKLVLMQHKDGQQAIETGDIDAWMG
                     LDPLMAQSELKGSGHLFFRNPDFNTYGVLNIREEFAKNNPALVSRVLAVYEKARKAAL
                     ENPAELKAALIAATGLPDDVITRQLERTDMKQSMIGAAQRATILAAGQALQEAGVIPP
                     DVDVAKAVDGMMDASYLK"
     gene            631..1923
                     /locus_tag="VLL76_04695"
     CDS             631..1923
                     /locus_tag="VLL76_04695"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HSV28827.1"
                     /translation="MTPAARLQAAIELLEQIETTNRPADQVSSFYFKGRRYIGAKDRR
                     AVAETVWRVLRSKARIDWWLAHLDYPADARARVFADLAFQGVKPDRDMFQGAHSARPP
                     GKEERQMMEALAGKSPFHHEMPAWVKGEYPEWLEGRLSALYGDRLGAEMGAMRDEAPL
                     DLRVNLLKATRESAIASLAAEQVAAEPTHWSPLGLRLKRRAPMVQLQAWRTGMVEIQD
                     EGSQLVALLTDAQPGQAVVDYCAGAGGKTLALAAAMQNKGRLVACDVAEWRVDKAQER
                     LRRAGVHNVTRRVIEGASDKWIKRSAASFDRVLVDAPCTGTGTWRRNPDAKWQLGETD
                     LLELVASQKVILASAARLVKPGGRLVYATCSILPDENEGQVEAFLAEHPDFSLVPVPE
                     LWPSLVGTPCPVEGPWLRLSPLSHGTDGFFAAILQRQA"
     gene            2357..2695
                     /locus_tag="VLL76_04700"
     CDS             2357..2695
                     /locus_tag="VLL76_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006713297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSV28828.1"
                     /translation="MKYIIAIIKPFKLDEVRDALSAAGIQGLTVTECKGFGRQKGQTE
                     IYRGAEYVANFVPKVKIEVAVEAAVADKAVEVIMNAARTGKMGDGKIFVTDISNVVRI
                     RTGETNHDAL"
BASE COUNT          515 a         1013 c          922 g          433 t
ORIGIN      
        1 gacccgcaca tcttcctgat cctggcgctc aaggccaacg gcatgagcac caaggacatc
       61 aagctggtgc tgatgcagca caaggacggc cagcaggcca tcgagaccgg cgacatcgac
      121 gcctggatgg ggctcgaccc cctgatggct cagtccgagc tgaagggcag cggccatttg
      181 ttcttccgca atcccgactt caacacctat ggcgtgctca acatccgtga agaattcgcc
      241 aagaacaacc cggcgctggt cagccgcgtg ctcgccgtct acgagaaggc gcgcaaggcg
      301 gcgctggaaa atccggccga gctgaaggct gcgttgatcg ccgccaccgg cctgcccgac
      361 gacgtcatca cccgccaact cgagcgcacc gacatgaagc agtccatgat cggagcggcc
      421 cagcgcgcca ccatcctggc cgccggccag gcgctgcagg aagccggggt gatcccgccc
      481 gacgtcgatg tcgccaaggc cgtcgatggc atgatggacg ccagctactt gaagtaaacg
      541 gttcaaggac tccgggcgtc gccgtccgga gtccttgcca accctcggcg aaacgtccta
      601 caaagcgcca cgctttcccg aaggttgtcc atgacccccg ccgcccgcct gcaagccgcc
      661 atcgagctgc tggagcagat cgagaccacc aaccgccccg ccgaccaggt gtcgtccttc
      721 tatttcaagg gacgccgcta catcggcgcc aaggaccgcc gcgcggtggc cgagaccgtg
      781 tggcgcgtgc tgcggtcgaa ggcgcgcatc gactggtggc tggcgcatct ggactacccc
      841 gccgacgccc gggcccgcgt gttcgcggac ctggccttcc agggcgtcaa gcccgaccgc
      901 gacatgttcc agggtgccca ttccgcccgc ccgccgggca aggaagaacg ccagatgatg
      961 gaagcgctgg ccggcaagtc accgttccat cacgagatgc ccgcctgggt taagggcgaa
     1021 tacccggaat ggctggaggg acgcctgtcg gccctgtacg gcgaccgcct gggcgccgag
     1081 atgggcgcca tgcgcgacga ggcaccgctc gacctgcgcg tgaacctgct gaaggccacc
     1141 cgcgaatccg ccatcgcctc gctggccgcc gaacaggtgg ccgccgagcc gacccactgg
     1201 tcgccgctcg gcctgcgcct caagcgccgc gcccccatgg tgcagttgca ggcgtggcgc
     1261 accggcatgg tcgagatcca ggacgagggt tcgcagctgg tggccttgct gaccgacgcc
     1321 cagcccggcc aggcggtggt ggattactgc gccggcgccg gcggcaagac cctggccctg
     1381 gcggcggcca tgcagaacaa gggccggttg gtggcctgcg acgtggccga atggcgcgtg
     1441 gacaaggcgc aggaacgcct gcgccgcgcc ggcgtccaca acgtcacccg ccgggtcatc
     1501 gaaggcgcct cggacaaatg gatcaagcga tccgccgcca gcttcgaccg cgtgctggtg
     1561 gacgcgccgt gcaccggcac cggcacctgg cgccgcaatc ccgacgccaa gtggcaattg
     1621 ggcgaaaccg atctgctgga actggtcgcc agccagaagg tcatcctggc cagcgccgcc
     1681 cggctggtga agcccggcgg ccggctggtc tatgccacct gctcgatcct gcccgacgag
     1741 aacgagggcc aggtcgaggc cttcctggcc gaacaccccg atttctcgct ggtgcctgtg
     1801 cccgaactgt ggccgtccct ggtgggcacg ccctgcccgg tggagggccc gtggctgcgg
     1861 ctgtccccgc tgtcccacgg caccgacggc ttcttcgccg ccatcctcca acggcaggct
     1921 tgagtctggg ccaggatctg ggccgtgccc atccggcggc attttcgcgg cgcgagattg
     1981 aactccatgg ccaggtcgtc gatgccaagg cgagtgggga tcgcagaatt aggtgtccat
     2041 ccgttgctcg gcaggaaggc gccgcagcat ggcgattgtc gtatgtcgcc cccagttgag
     2101 accaagcggg gctgacccat gcccccccgc cttcgcgggg gtgacgagtt tggaggcgga
     2161 ggaattccgc ttcattgcac aataaatagt cacgcggcga cacgctgcac acacattgtg
     2221 ctaatggcgc caacgcgaca ttcccccctg tcgtaaaaca tcaagcgttt ccacgcttta
     2281 gccattcggc atggctcttg cgtaccactc cccccgttag gccggtcata gcccggcgga
     2341 cgacacaggg ggtccaatga aatacatcat cgccatcatc aagccgttca agctggacga
     2401 ggtgcgcgac gccctctcgg cggccggcat ccagggcctg accgtcaccg aatgcaaggg
     2461 cttcggtcgg cagaaggggc agaccgagat ttatcgcggc gccgagtacg tcgccaattt
     2521 cgtgcccaag gtgaagatcg aggtcgccgt cgaggcggcc gtcgccgaca aggcggtcga
     2581 ggtcatcatg aacgccgcgc gcaccggcaa gatgggcgac ggcaagatct tcgtcaccga
     2641 catctcgaac gtcgtgcgca tccgcaccgg cgaaaccaac cacgacgcgc tctaacaagg
     2701 gatcacgcga catgaagacc atccttcgca aggttcggga cgccgccgcc gttaccggcg
     2761 cggtcctggt gaccgccggc caggccgtcg cccaggaagc cgccgaggcc gccgccgccg
     2821 ccccgacccc cgaactctcc gctggcgaca ccgcctggat gctgacctcg tccatcctgg
     2881 tcc
//
LOCUS       DATIKR010000299         3698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_113181, whole genome shotgun sequence.
ACCESSION   DATIKR010000299 DATIKR010000000
VERSION     DATIKR010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113181"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..949
                     /locus_tag="VLL76_04705"
     CDS             <1..949
                     /locus_tag="VLL76_04705"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSV28829.1"
                     /translation="TAPTTIVPAETAQPRDRVARHIRDAADSTGVPFDYLLAQANQES
                     RLNPDAKSRRSSAMGLYQFTKGTWLDMVKKHGAEHGLERYADAIATGKDGKPMVADAA
                     MRREILELRRDPKVSALMAAEYAKENEAVLEARLGRQVSSHDLYLAHFLGASGAARVL
                     EGVEDSPRHSAAGALPDAARANPEVFREPGSSRPRSFASLYKAVKARFANATESVAHM
                     AQRARPEMDLAALKPPPRPEVAPDPGPQLAMADPAEVPVTDTALLPPAPPPYAAFANA
                     MEPDTPFFPAALPPATSSGGLRAGGPVLRLMIEDMGGKA"
     gene            complement(954..1877)
                     /locus_tag="VLL76_04710"
     CDS             complement(954..1877)
                     /locus_tag="VLL76_04710"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28830.1"
                     /translation="MTLLRPRVLLLAIAVLYGLVVGGLAGYAITLDPDSLVIVAAVAV
                     VAVGLMAALVVMLLRQWRHERGAARDLAELNRELERSNADLEQFAYVASHDLKEPLRN
                     ISSYVQLLQRRYQGKLDPDADAFIGYTVEGVRRMQAIIHELLAYSRIGTGTLNLQPIQ
                     AGAAVSSALAQLKTVIAEAQAAVEIKGPLPVVMADSVQLASLFQNLIGNGIKYRRPEV
                     RPEVTVGVEDKGAHWAFFVRDNGIGIESQYHAQIFELFKRLHPRGHYQGTGIGLSVCK
                     RVVERHGGQIWVDSQAGFGSTFWFTLPKVAG"
     gene            complement(2012..>3698)
                     /locus_tag="VLL76_04715"
     CDS             complement(2012..>3698)
                     /locus_tag="VLL76_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HSV28831.1"
                     /translation="TAARDIVNPGTGATIVPAGEIIGESEVELIDDAGIEVVAIRSVL
                     TCQAKEGVCGACYGRDLARGTKVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRG
                     AEASSIESVGDSTVQVLNRSVVTNSSGAKIVMSRNCEIVLTDDNGRERARHRVPYGAK
                     LLADAGEKVTKGTKLAEWDPYTLPIITETSGVAHFVDLVEGLSMREVVDEATGIASKV
                     VIDWKQQPRGSDLRPRVELRDDKGNPVTLPNGLEARYFMSLDAILSVENHAKLNAGDV
                     IARIPREGSKTRDITGGLPRVAELFEARKPKDHAIISEIEGRVEFGKDYKSKRRIMVV
                     PEDGDAVEYLIPKGKHISVQEGDYVRRGDSLMDGNPVPHDILKVMGVEALAQYLINEI
                     QEVYRLQGVKINDKHIEVIVRQMLQKVEITEAGDTTLLVGEQVDRQEFEYENAKAIKE
                     QGRPASGTPVLQGITKASLQTHSFISAASFQETTRVLTEAAVSGKVDTLNGLKENVIV
                     GRLIPAGTGAVMNRLRELAAKRDREMQVEGEGEAPALAATGTEGTQPSAPPAE"
BASE COUNT          571 a         1300 c         1228 g          599 t
ORIGIN      
        1 gaccgcgccg acgaccatcg ttcccgccga aaccgcccag ccgcgcgacc gcgtcgcccg
       61 ccatatccgc gacgccgccg acagcaccgg cgtgccgttc gactatctgc tggcgcaggc
      121 caaccaggaa agccggctga accccgacgc caagagccgg cggtcgtcgg ccatggggct
      181 gtaccagttc accaagggca cctggctgga catggtcaag aagcacggcg ccgagcacgg
      241 cctggagcgc tatgccgacg ccatcgccac cggcaaggac ggcaagccca tggtggccga
      301 cgctgccatg cgccgcgaga tccttgagtt gcggcgtgac cccaaggtct cggccctgat
      361 ggccgccgaa tacgccaagg agaacgaggc ggtgctggag gcccggctcg gccgccaggt
      421 gtcgtcgcac gacctctatc tcgcccattt cctgggggca tccggcgccg cccgcgtgct
      481 ggagggcgtc gaggacagcc ccaggcactc cgccgccggc gccctgcccg acgccgcccg
      541 cgccaatccc gaggtgttcc gggaacccgg ttcgtcgcgg ccgcgatcgt tcgcttcgct
      601 gtacaaggcg gtcaaggccc gtttcgccaa tgccaccgaa tcggtcgccc acatggcgca
      661 gcgtgcccgc cccgagatgg acctggccgc cctgaagccg ccgccccgcc ccgaggtcgc
      721 gcccgatccc ggcccgcaat tggccatggc cgacccggcc gaggtgccgg tcaccgatac
      781 cgccctgctg ccgccggccc cgccgcccta tgcggccttc gccaacgcca tggaacccga
      841 caccccgttc ttccccgccg ccctgccgcc ggccacgtcg agcggcggcc tgcgcgccgg
      901 cggcccggtg ctgcggctga tgatcgagga catgggcggc aaggcctgag gccctaaccc
      961 gccaccttgg gcagggtgaa ccagaaggtc gagccgaagc cggcctggga atcgacccag
     1021 atctggccgc catggcgttc caccacccgc ttgcacaccg acaggccgat gccggtaccc
     1081 tggtagtggc cgcgcgggtg caggcgcttg aacaactcga agatctgggc gtggtattgg
     1141 ctttcgatgc cgatgccgtt gtcgcgcacg aagaaggccc agtgcgcgcc cttgtcctcg
     1201 acgcccacgg tgacctcggg gcggacctcg gggcggcggt acttgatgcc gttgccgatc
     1261 agattctgga acaggctggc gagttggacg gaatcggcca tcaccaccgg cagcggcccc
     1321 ttgatctcaa ccgccgcctg ggcctcggcg atcaccgtct tgagctgcgc cagggcagac
     1381 gacaccgccg cgccggcctg gatcggctgc aggttcaggg tgccggtgcc gatgcgcgaa
     1441 taggccagca attcgtggat gatcgcctgc atgcggcgaa cgccctcgac ggtgtagccg
     1501 atgaaggcgt cggcgtcggg atccagcttg ccctggtagc gccgttgcag cagttggacg
     1561 tagctggaga tgttgcgcag cggctccttg aggtcgtgcg acgccacata ggcgaattgc
     1621 tcgaggtcgg cattggaccg ctccaactcg cgattgagct cggccagatc gcgggcggcg
     1681 ccgcgttcgt gccgccattg ccgcagcagc atgaccacca gcgcggccat cagcccgacc
     1741 gccaccaccg ccacggcggc cacgatcacc agggaatcgg ggtccagcgt gatggcatag
     1801 cccgccaggc cgcccaccac caacccgtaa agcacggcga tggcaagaag cagcactctc
     1861 ggccgcagca gcgtcacgtc ctggcccaaa caactttccc caatggtctc gcacagcaag
     1921 ggtagccgac cggggccgtc ctgtcatggc cttcaaacga aaacccccgc ccggtcgccc
     1981 gggcgggggt ttcgcttcaa caacgcgggc cttactcggc cggcggggcc gacggctggg
     2041 tgccttcggt gccggtcgcg gccaaggccg gagcctcgcc ctcgccttcc acctgcatct
     2101 cgcggtcgcg cttggcggcc agctcgcgca ggcggttcat caccgcgccg gtaccggcgg
     2161 ggatcagacg gccgacgatc acgttttcct tcaggccgtt cagggtgtcg accttgccgg
     2221 aaaccgccgc ctcggtgagg acgcgggtgg tctcctggaa cgacgccgcc gagatgaacg
     2281 aatgcgtctg caagctggcc ttggtgatgc cctgcagcac cggggtgccg gaagccgggc
     2341 ggccctgctc cttgatcgcc ttcgcgttct cgtactcgaa ctcctggcgg tcgacctgtt
     2401 cgccgaccaa cagggtggtg tcgccggctt cggtgatctc gaccttctgc agcatctggc
     2461 gaacgatcac ctcgatgtgc ttgtcgttga tcttcacgcc ctgcagacga tagacctcct
     2521 ggatctcgtt gatgagatac tgcgccagcg cctcgacacc catgaccttg aggatgtcgt
     2581 gcggcaccgg gttgccgtcc atcagcgagt cgccacggcg gacgtagtcg ccttcctgca
     2641 ccgagatgtg cttgcccttg gggatgaggt actcgaccgc atcgccgtcc tcgggcacca
     2701 ccatgatgcg gcgcttggac ttgtagtcct tgccgaattc cacgcggccc tcgatctcgg
     2761 aaatgatcgc gtgatccttg ggcttgcggg cttcgaacag ctcggccaca cgcggcagac
     2821 cgccggtgat gtcgcgggtc ttcgagcctt cgcgcgggat gcgggcgatg acgtcgccgg
     2881 cgttgagctt ggcgtggttc tccaccgaca ggatggcgtc cagcgacatg aagtagcggg
     2941 cctcgaggcc gttgggcagc gtgacggggt tgcccttgtc gtcacgcagc tcgacgcgcg
     3001 gccgcaggtc ggaaccgcgg ggctgctgct tccagtcgat gaccaccttg ctggcgatgc
     3061 cggtggcctc gtcgaccacc tcgcgcatcg acaggccttc caccaggtcg acgaaatggg
     3121 cgacgcccga cgtctcggtg atgatcggca gggtgtaggg atcccactca gcaagcttgg
     3181 tgcccttggt caccttctca ccggcatcgg ccagcagctt ggcgccgtag ggcacgcggt
     3241 ggcgggcacg ctcgcggccg ttgtcgtcgg tgagcacgat ttcgcaattg cggctcatga
     3301 cgatcttggc gcccgacgag ttggtcacca ccgagcggtt cagcacctgc accgtcgaat
     3361 cgccgaccga ttcgatggac gacgcttcgg cgccacgctg agccgcacca ccgatgtgga
     3421 aggtacgcat ggtcagctgg gtgccgggct cgccgatcga ctgggcggcg atgacgccga
     3481 cggcctcgcc gacgttgacc ttggtgccgc gcgccagatc acggccgtag caggcgccgc
     3541 agacgccttc cttggcctgg caggtcagca ccgagcggat ggcgacgacc tcgatgccgg
     3601 cgtcgtcgat cagctcgacc tcggactcgc cgatgatctc gccggccggg acgatggtcg
     3661 cgccggtgcc ggggttgacg atgtcgcggg ccgcggta
//
LOCUS       DATIKR010000300         1901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_52729, whole genome shotgun sequence.
ACCESSION   DATIKR010000300 DATIKR010000000
VERSION     DATIKR010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52729"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="VLL76_04720"
     CDS             complement(<1..990)
                     /locus_tag="VLL76_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV28832.1"
                     /translation="MLLPFAAGYFLSYLYRTVNAILAPEIARAVELDAAALGLMTGAY
                     FLAFAAFQLPLGILLDRFGPRRVEATLLLFAGMGATLFALADGEGTLVAGRALVGFGV
                     SACLMAALKANVQFFPVGRLALMNGIILSAGGLGAVAATAPVQAALAVTDWRGVYAML
                     AVVTVVVAVVLFVTVPDRDTHAGGPSLADQLRDVGRIVVHPLFLRVAPAFMLALGGFM
                     AVQGLWAGPWLRDVAGLDPAGTATGLTVMAAGMAVGFLTWGAIAERLGRLGIPTVKVA
                     ATGMAVFWLASLAMAVGWDGAPLVLAATYGFFGSSSSLNYAVLTQGFPAHLAGR"
     gene            1145..1432
                     /locus_tag="VLL76_04725"
     CDS             1145..1432
                     /locus_tag="VLL76_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018420594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6516 family protein"
                     /protein_id="HSV28833.1"
                     /translation="MKARRIFYDKLAYPDGAILEMTIWAVPTSVEGSGHLLKYSLFYG
                     YPGLRVVGYDNERPKGDHRHVAGNEEPYTFTTPEALIADFLADVKKARGEA"
     gene            1429..1776
                     /locus_tag="VLL76_04730"
     CDS             1429..1776
                     /locus_tag="VLL76_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28834.1"
                     /translation="MSKNVTVHIGTAEDMGNRFIDAWHRAEGGAAVDEAHLTFLDLES
                     LLATLTPKRLQLLRYVRHHDVGTIKALADELQRDYKNVHRDVEALARLGLIARTPAGV
                     KTPFAEVDARLVL"
     gene            complement(1773..>1901)
                     /locus_tag="VLL76_04735"
     CDS             complement(1773..>1901)
                     /locus_tag="VLL76_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV28835.1"
                     /translation="ERLVQAMEKCGWVQAKAARLLGLTPRQIGYALKKHGIEIEKI"
BASE COUNT          366 a          653 c          617 g          265 t
ORIGIN      
        1 gcgcccggcc agatgcgccg ggaagccttg ggtcagaacc gcgtagttga gggaactgga
       61 agacccgaag aatccgtagg tcgcggccag gaccagcggc gcgccgtccc agcccacggc
      121 catggccagg ctggccagcc agaacaccgc catgccggtg gcggcgactt tgacggtggg
      181 gatgcccagc cttcccagcc gctcggcgat ggcgccccag gtcaggaagc ccaccgccat
      241 gccggccgcc atcacggtca ggccggtggc ggtgccggcc gggtcgaggc cggcgacatc
      301 gcgcagccac ggccccgccc acaagccctg caccgccatg aagccgccca gcgccagcat
      361 gaacgccggc gccacccgca ggaacagcgg atggacgacg atgcggccga catcgcgcaa
      421 ctggtcggcc agggacggtc cgccggcatg ggtgtcgcgg tcgggcacgg tgacgaacag
      481 caccaccgcc accaccaccg tcaccaccgc cagcatggcg tagacgccgc gccagtcggt
      541 caccgccagg gcagcctgga ccggcgcggt ggccgccacc gctcccaatc cgccggccga
      601 caggatgatg ccgttcatca aggccagccg tccgaccggg aagaactgaa cgttggcctt
      661 gagcgccgcc atcaggcagg ccgacacccc gaaccccacc agcgcccgcc cggccaccag
      721 ggtaccctcg ccatcggcca acgcgaacaa ggtggcgccc atgccggcga acagcagcag
      781 tgtcgcctcg acccggcgcg ggccgaagcg gtcgagcagg atgcccagcg gcaattggaa
      841 ggcggcgaag gccaggaaat aggcccccgt catcagcccc agcgcggccg cgtccaattc
      901 gacggcgcgg gcgatctcgg gcgccaggat ggcgttgacc gtgcggtaca ggtacgacag
      961 gaaatagccc gccgcgaacg gcagcagcac gcgcaacccc agcctcagcc ccgacggttc
     1021 catgtgctcc ccgcttgcca tcgcattttg cgcctacgat ggcaaggaag ccgggcgggg
     1081 gtcaatcagg ctgtaagatc atggcgtttg acgccatatt gagccccatg gtatcggata
     1141 ccatatgaag gccaggcgca tcttttacga caagctcgca tacccggacg gagccatcct
     1201 cgaaatgacc atctgggcgg tgccgacgtc cgtggagggg agcggccatt tgctgaaata
     1261 cagcctgttc tacggttatc ccggcctgcg ggtggtaggc tatgataacg aacggcccaa
     1321 gggcgatcat cggcacgtcg caggcaacga ggaaccttat accttcacga cgcccgaagc
     1381 gctgatcgcg gactttctgg cggacgtgaa gaaagcgcgg ggtgaggcat gagcaagaac
     1441 gtcaccgttc acatcggcac cgccgaagac atgggcaatc gctttatcga cgcgtggcac
     1501 cgcgccgaag gtggagcggc ggtcgatgaa gcgcacttga ccttcctcga cctcgaaagc
     1561 ctgttggcga cgcttacccc caagcgcctg caattgctgc gctatgtccg tcaccacgat
     1621 gtcggcacca tcaaggcatt ggccgacgaa ctccagcggg attacaagaa cgttcaccgc
     1681 gacgtcgagg ccctggcacg gctggggctg atcgccagga ctccggcggg cgtcaagacc
     1741 ccgttcgccg aggtcgatgc gcggctggtg ctctagattt tctcgatctc gatgccgtgc
     1801 tttttcagcg cataaccgat ctggcgcggc gtcaggccga gcaggcgggc ggccttggct
     1861 tggacccagc cgcatttctc catggcctgg accaggcgct c
//
LOCUS       DATIKR010000301         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_185610, whole genome shotgun sequence.
ACCESSION   DATIKR010000301 DATIKR010000000
VERSION     DATIKR010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185610"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VLL76_04740"
     CDS             <1..334
                     /locus_tag="VLL76_04740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28836.1"
                     /translation="DDATLTASAADTVSATQDLTGAYQASAKVRITNGGTGPTVAAQC
                     RVQVAEADTAAKFMTLATCQAGVTNSGVFEWVVIIPDPSMYVRFVSGSNTGQNVTLRV
                     TVERITAL"
     gene            336..>1680
                     /locus_tag="VLL76_04745"
     CDS             336..>1680
                     /locus_tag="VLL76_04745"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HSV28837.1"
                     /translation="MRRWPFKPPLGTPINWGHPVAAGLRAYVPMLDVPGEAAPMEVLR
                     RVRLTATAAPPSWAHTQQGPARRYTYAGATQRADSLSGYGIASPLTVAVRFQVTSSPG
                     QRGICGVANSVDSGTPSLLLAYGRTANKIDYYTGAYTTGAIAVGLNQWYTAVCAYDGA
                     AWTFYINGHQDGTRTTALGADRNLFGLGSGFGGTVEGEIAWAALWGRALSRQDAQELT
                     ANPYCLLATPRRLWVVYESPAEEITGTIAASIAAPTSASVAALGFTGTVAAAIGAPVT
                     ASTAALGFTGTAAAGIPAPGAAASASLGFSAAAAASVPAPGASTAAALEFSAAAAPGI
                     PAPSATAAASLGFSGTVSASVSAPTSAATAETAVSYLAEIAVSVPGPTCAADATYTPL
                     AITGTVGASISAPVCAASAQADVPAIEGTIAASIPAATAAASAALGFTGTAAGAIA"
BASE COUNT          253 a          589 c          590 g          248 t
ORIGIN      
        1 cgacgacgcc acgctgacgg cgagtgcggc ggatacggtg tccgcaacgc aagacctcac
       61 cggcgcctat caggcctccg caaaggtccg catcacgaac ggcggaaccg gccccacggt
      121 cgcggcgcaa tgccgggtgc aggtagccga ggccgacacc gccgcaaagt tcatgacttt
      181 ggcgacatgc caggcgggcg tgacaaacag cggcgtcttc gagtgggtcg taatcattcc
      241 ggacccctcg atgtacgtgc gatttgtgtc cggcagtaac accggccaga acgtgacgct
      301 gcgggtaacc gtggagagga tcacggcact ctgacatgag gcgctggcct ttcaagccgc
      361 cgctcggcac gccgatcaac tggggccacc cggtcgcggc gggactgcgg gcgtatgtcc
      421 ccatgttgga tgtgccgggc gaggcggccc cgatggaggt gctgcgacgg gtgcgcctga
      481 cagccacggc agcgccgccc tcgtgggcgc acacccagca agggccagcg cggcggtaca
      541 cctatgcggg ggcgacgcaa cgggcggact ccctttccgg gtatggcatc gcctccccac
      601 tgaccgtcgc cgtgcggttc caggtaacct ccagccccgg gcagcgcggc atctgcgggg
      661 tggcgaactc ggtagactcc ggcaccccaa gcctgctgct ggcctatggc cgcacggcga
      721 ataagatcga ctactatacc ggggcgtaca cgaccggcgc catagcggtc gggctgaacc
      781 agtggtatac cgccgtctgc gcttacgatg gcgcggcctg gaccttctac atcaacggcc
      841 accaggacgg cacgcgcacc acggcgctgg gggccgaccg gaatctgttt ggcctgggga
      901 gcggattcgg cggaactgta gagggcgaga tcgcgtgggc ggcgctctgg ggcagggcgc
      961 tatcgaggca ggatgcccag gagttgaccg caaatccgta ctgtctgctg gcgaccccgc
     1021 ggcggctgtg ggtggtctat gaatcgccgg ccgaagagat caccggcaca atcgccgcca
     1081 gcatcgcggc cccgacctcc gcatccgtcg cggccctcgg cttcaccggc acggtagcgg
     1141 cggccatcgg cgcgcccgtc accgcatcga cagcggctct gggattcact ggtacggctg
     1201 cggccggcat ccccgccccg ggcgcggcgg ccagcgcctc gcttggcttc tctgcggctg
     1261 cggcggcatc cgtcccggcg cccggagcat cgactgcggc ggcgctcgag ttctcggcgg
     1321 cagcagcccc cggcatcccg gctccatcgg caaccgcggc ggcctcgctc ggcttcagcg
     1381 ggaccgtctc ggcatcggtt tcggccccga cgtccgcggc gaccgccgag accgccgtat
     1441 cgtacctcgc cgagatcgcg gtgagcgtcc ccggcccgac gtgcgcggcg gatgcgacgt
     1501 acactccgct tgcgatcacg ggcacggtgg gggcgtccat ctccgctccg gtctgcgcgg
     1561 catcggcaca ggcggacgta ccggccattg agggcacgat tgccgcgagc atcccggcgg
     1621 cgactgctgc ggcttcggct gctctggggt tcaccggcac ggcggccggc gcgattgccg
//
LOCUS       DATIKR010000302         4668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_28756, whole genome shotgun sequence.
ACCESSION   DATIKR010000302 DATIKR010000000
VERSION     DATIKR010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4668
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28756"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VLL76_04750"
     CDS             complement(<1..483)
                     /locus_tag="VLL76_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSV28838.1"
                     /translation="MDFLAGIWNYVVVFLVILTVVVFIHELGHYLVARWNGVKVEVFS
                     IGFGPELFGWNDKAGTRWRVSLLPLGGYVKMFGDADAASATADDRPMTEAEKAQSFQH
                     KRVGQRAAIVFAGPAANFIFAILGLAAMFMIMGQPVTEPVVGKVHEGTAAFEAGLAPG
                     D"
     gene            complement(497..1669)
                     /locus_tag="VLL76_04755"
     CDS             complement(497..1669)
                     /locus_tag="VLL76_04755"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HSV28839.1"
                     /translation="MSDGRRGVTILGSTGSIGRNTVELVEARPDLYRVEALVANSSAE
                     LLAEQARRLKPRLAVVADEAAYGRLKDELAGTGIAVAAGAAAVVDAATLPAEWVMAAI
                     VGAAGLEPTVAAARRGAVVALANKECLVCAGELMLAEVANNGATLIPVDSEHSAIFQV
                     FDFEQVDTIEKIILTASGGPFRSRSREEMAAMTPDQALAHPNWSMGAKISIDSATMMN
                     KGLELIEAHHLFGLGEDRIDIVVHPQSVIHSMVAYVDGSVLAQMGSPDMRTPIAYALG
                     WPKRIPAPSPRLDLAAIGSLTFEAPDPARFPALRLARRALQSGGSAPTVLNAANEVAV
                     QAFLSRGIGFLDIAGVVEATLEATEHVSLSSIEDVLAQDKRARECAWNVIKRGRGF"
     gene            complement(1680..2471)
                     /locus_tag="VLL76_04760"
     CDS             complement(1680..2471)
                     /locus_tag="VLL76_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSV28840.1"
                     /translation="MLGLRTLSALVMAPPALLAVWWGGFAFAALVSVAAFIMCWEWHR
                     MIVKDFGWSGRVAAIGCAGASLLAMVMPMQASLLVVAAAVASTALAPSHSERLREWAG
                     IGALYAGLPAVALVWLRGDADLGRETIFWLFLVVWATDTGAYGFGRLIGGPKLMPAVS
                     PKKTWAGLVGGMLCSALVGFGVAAMVDLPHGLWVALGSAGLAVVAQAGDLTESWVKRK
                     FGVKDSSNIIPGHGGVLDRVDGLLAVAAAVALATWSSGVMVLMWR"
     gene            complement(2479..3213)
                     /locus_tag="VLL76_04765"
     CDS             complement(2479..3213)
                     /locus_tag="VLL76_04765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HSV28841.1"
                     /translation="MEPAASHADTPSPPAHVAIIMDGNGRWAKARGLPRTAGHKRGAE
                     AVRQAVECARELGIAYLTLYAFSSENWKRPVGEVTDLMGLLRLYLRNEVASLHKNGIR
                     LKVIGDRSRLGPDIVKLIQESEAKTAANTALTLTLALSYGGRQEIVEAARQVARDVAA
                     GLLSPDAVDEDAVAARLFTHDMPDPDLIIRTSGEKRISNFLLWQGAYAELVFTDVLWP
                     DFGRAELEAALRDFHGRERRYGNAGG"
     gene            complement(3219..3791)
                     /gene="frr"
                     /locus_tag="VLL76_04770"
     CDS             complement(3219..3791)
                     /gene="frr"
                     /locus_tag="VLL76_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HSV28842.1"
                     /translation="MSTPTNWNDLKKDLHHRMDNTVEVLKKEFSGLRTGRAAASLLEP
                     IMVEAYGQVMPITQCGTIGVPEPRMLTVQVWDKGQVKAVEKAIRDAGLGLNPQTDGQL
                     VRVPIPALNEERRKELQKVAGKYAEQARVAVRNVRRDGMDTLKKMEKDGHISEDEIKK
                     HEKEIQALTDETIKKIDETLGHKEKEIIQV"
     gene            complement(3796..4521)
                     /gene="pyrH"
                     /locus_tag="VLL76_04775"
     CDS             complement(3796..4521)
                     /gene="pyrH"
                     /locus_tag="VLL76_04775"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HSV28843.1"
                     /translation="MASDAKYRRVLLKISGEGLMGSREYGLDPETVERIALEVKSVRD
                     LGVEVCAVVGGGNIFRGMSAAANGIERAAADNMGMLATVMNALALQNALERIGVFTRV
                     QSAITMPTVCESFIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRAVEMGCDALL
                     KASQVDGVYSADPKKVPDAVRYDHLTFHDVLARDLAVMDASAISLCRENKVPIVVFDM
                     HKDGAFAEVVSGRGRFTIISEGG"
BASE COUNT          750 a         1580 c         1603 g          735 t
ORIGIN      
        1 gtcgcccggc gccaggccgg cctcgaacgc ggcggtgccc tcgtggacct tgccgaccac
       61 cggctcggtg acgggctggc ccatgatcat gaacatggcg gccaggccga ggatggcgaa
      121 gatgaagttg gcggccgggc cggcgaacac gatggcggcg cgctgcccca cccgcttgtg
      181 ctggaacgac tgcgccttct cggcctcggt catggggcgg tcgtcggcgg tggccgaggc
      241 ggcgtcggcg tcgccgaaca tcttcacgta gccgcccagc ggcagcaggc tgacgcgcca
      301 gcgggtgccg gccttgtcgt tccagccgaa cagctcgggg ccgaaaccga tcgagaacac
      361 ctcgaccttc acgccgttcc agcgcgcgac caggtaatgg ccgagctcgt ggatgaacac
      421 cacgacggtc aggatgacca ggaagacgac gacgtagttc caaatgccag caaggaaatc
      481 catggctctc cgcctgtcag aaaccgcgtc cgcgtttgat cacgttccag gcgcattcgc
      541 gcgcccgctt gtcctgggcc agcacgtctt cgatggagga caaggagaca tgctcggtcg
      601 cttccagggt cgcctcgacc accccggcga tatccaggaa gccgatgccg cgggaaagaa
      661 acgcctgtac cgcgacttcg ttggcggcgt tcaagactgt aggtgccgac ccgccgcttt
      721 gcaaggcgcg ccgggccagg cgcagagcgg ggaaacgggc gggatcgggg gcctcgaagg
      781 tcaggctgcc gatggcggcc aggtccaggc gcggcgacgg cgccgggatg cgcttgggcc
      841 agcccagggc ataggcgatg ggcgtgcgca tgtcggggct gcccatctgc gccagcaccg
      901 agccgtccac ataggcgacc atggaatgga tgaccgattg ggggtgcacg acgatgtcga
      961 tgcggtcctc gcccaggccg aacaggtggt gggcctcgat cagttccagg cccttgttca
     1021 tcatggtggc cgaatcgatc gagatcttgg cgcccatgga ccaattggga tgcgccagcg
     1081 cctggtcggg cgtcatcgcc gccatttcct cgcgcgagcg gctgcggaac ggcccgcccg
     1141 aggcggtcag gatgatcttt tcgatggtgt cgacctgctc gaagtcgaac acctggaaga
     1201 tggccgaatg ctcggaatcc accgggatca aggtggcgcc gttgttggcg acctcggcca
     1261 gcatcagctc gccggcacag accaggcatt ccttgttggc caaagccacc acggcgccgc
     1321 gacgggcggc ggcgacggtc ggttccaggc cggcggcgcc gacgatggcg gccatcaccc
     1381 actcggccgg cagggtggcg gcatcgacca cggcggcggc gccggccgca accgcgatgc
     1441 cggtgccggc cagttcatcc ttgaggcggc cataggccgc ttcgtcggcc accacggcca
     1501 ggcgcggctt caggcggcgc gcctgctcgg ccagcaattc ggcgctggaa ttggcgacca
     1561 gggcctcgac ccggtagagg tcgggccgcg cctcgaccag ctcgacggtg ttgcgaccga
     1621 tggaaccggt cgaacccagg atggtgacgc cgcgcctgcc gtcgctcatg ccctgccctt
     1681 catcgccaca tcaacaccat cacccccgac gaccaggtcg ccagcgcgac cgcggcggca
     1741 accgccagca ggccgtccac ccggtcgagc acaccgccgt ggccggggat gatattcgag
     1801 gaatccttga cgccgaattt gcgcttcacc cagctctcgg taaggtcgcc ggcctgggcg
     1861 accacggcga ggccggcgct gcccaaggcg acccaaagcc cgtggggcag gtccaccatc
     1921 gcggcgacgc cgaagccgac cagggccgag cacagcatgc cgccgaccag cccggcccag
     1981 gtcttcttgg ggctgacggc cggcatcagc ttgggtccgc cgatcaggcg gccgaagccg
     2041 taggcgccgg tgtcggtggc ccacaccacc aaaaacagcc agaagatggt ctcgcggccg
     2101 aggtcggcat cgccgcgcag ccacaccagc gccaccgccg gcaggccggc atagagggcg
     2161 ccgattccgg cccactcgcg cagccgctcg ctgtggctgg gcgccagcgc ggtcgaggcg
     2221 acggcggcgg ccaccaccag cagcgatgcc tgcatgggca tcaccatggc gagcagcgac
     2281 gccccggcgc agccgatggc ggccacgcgg ccggaccagc cgaaatcctt gacgatcatc
     2341 ctgtgccatt cccagcacat gatgaacgcg gcgaccgata ccagggcggc gaaggcgaat
     2401 ccgccccacc agacggccaa cagggccggc ggcgccatga cgagggcgga aagggtgcga
     2461 agtcccagca cggagcggtc agccgccggc gttgccgtag cgccgctcgc ggccatggaa
     2521 gtcgcgcaag gcggcctcca gctcggcacg gccgaaatcg ggccacagca cgtcggtgaa
     2581 caccagctcg gcgtaggcgc cctgccacag caggaagttc gagatgcgct tctcgccgct
     2641 ggtgcggatg atcaggtcgg gatcgggcat gtcgtgggtg aacagccgcg cagccaccgc
     2701 gtcttcatcg accgcgtcgg gtgacagcag gccggcggcg acgtcgcggg caacctggcg
     2761 ggccgcctcg acgatctcct ggcggccgcc gtaggacagc gccaacgtga gcgtcagagc
     2821 ggtgttggcc gccgtcttgg cctcggactc ctggatcagc ttgacgatgt cgggacccag
     2881 ccgcgagcgg tcgccgatca ccttcaggcg gatgccgttc ttgtgcaggc tggcgacctc
     2941 gttacgcaaa tacaggcgca gcaggcccat caggtcggtg acctcgccga ccgggcgctt
     3001 ccagttctcg gacgagaagg catacagggt cagataggcg atgcccagct cccgcgcgca
     3061 ttcgaccgct tggcgcacgg cttcggcgcc gcgcttgtgg ccggcggtgc gcggcaaccc
     3121 ccgcgccttg gcccagcggc cgttgccatc catgatgatg gcgacatgcg cgggcggcga
     3181 cggggtgtcg gcgtgggagg ctgcgggctc catcaccatc agacctggat gatctccttt
     3241 tccttgtgac cgagcgtctc gtcgatcttc ttgatcgtct cgtcggtcag ggcctggatt
     3301 tccttttcgt gcttcttgat ctcgtcttcc gagatatggc cgtccttttc catcttcttc
     3361 agcgtgtcca tgccatcgcg gcggacgttg cggacggcga cgcgggcctg ctcggcatac
     3421 ttgccggcga ccttctgcag ctccttgcgg cgctcctcgt tcagcgcggg gatcggcacc
     3481 cgcaccaact ggccgtcggt ctgcgggttg aggcccaggc cggcgtcgcg gatggccttc
     3541 tcgaccgcct tgacctggcc cttgtcccac acctgcacgg tcagcatgcg cggctcgggc
     3601 acgccgatgg tgccgcactg ggtgatcggc atgacctggc cataggcctc gaccatgatc
     3661 ggctcgagca ggctggcagc ggcgcggccg gtgcgcaggc ccgagaattc cttcttcagc
     3721 acctcgaccg tattgtccat acggtggtgc aagtccttct tgaggtcgtt ccagttggtg
     3781 ggtgtggaca cggtatcaac ccccttcgct gatgatcgtg aagcgcccgc ggcccgagac
     3841 gacctcggcg aaggcgccat ccttgtgcat gtcgaaaacc acgatcggca ccttgttctc
     3901 gcggcacagc gagatggccg aggcatccat caccgccagg tcgcgcgcca gcacgtcgtg
     3961 gaaggtgaga tggtcgtagc gcaccgcgtc cgggaccttc ttggggtcgg cggaatagac
     4021 gccgtccacc tggctggcct tgagcagggc gtcgcagccc atctcgacgg cgcgcagggc
     4081 ggcggcggtg tcggtggtga agaacggatt gccggtgccg gcggcgaaga tcaccaccct
     4141 gcccttttcc agatggcgga tggcgcggcg gcggatgaag gattcgcaca ccgtcggcat
     4201 ggtgatggcg gattgcacgc gggtgaacac cccgatgcgc tcaagcgcat tctgcagcgc
     4261 gagcgcgttc atgacggtgg ccaacatgcc catgttgtcg gccgcggcgc gttcgatgcc
     4321 gttggcggcc gccgacatgc cgcggaagat gttgccgccg ccgacgacgg cgcacacctc
     4381 gacgcccagg tcgcggaccg acttgacctc gagcgcgatg cgttcgaccg tttccggatc
     4441 gaggccgtat tcgcgcgagc ccatcagccc ttcgccggag atcttgagga gaacgcggcg
     4501 gtacttggcg tcgctagcca tgctgccctc gaaacctgtg agtgtccgga cccggcatcc
     4561 ccgaccggcg tggccggggg cggaattcct tgatatcggg cggtcctgcc gggacggcga
     4621 tcatatacgc ccgtcgcccg gctgtctcgc ccctttgtga cggtaaag
//
LOCUS       DATIKR010000303         3634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_41316, whole genome shotgun sequence.
ACCESSION   DATIKR010000303 DATIKR010000000
VERSION     DATIKR010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41316"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..507)
                     /locus_tag="VLL76_04780"
     CDS             complement(55..507)
                     /locus_tag="VLL76_04780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV28844.1"
                     /translation="MSERLTKAAARNIFYGGTAAFFIVFVGLVAHSHTYVVETSTNKA
                     TLTDAVARGKHVWEKNSCINCHSLIGEGAYFAPELGNVWDRYGGREDAVAASDALKAW
                     IKAQPTGAEGRRQMPQFNLTEQELDDLVEFFRWTDSVKTQNWPPHKAG"
     gene            707..982
                     /locus_tag="VLL76_04785"
     CDS             707..982
                     /locus_tag="VLL76_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011519345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2249 domain-containing protein"
                     /protein_id="HSV28845.1"
                     /translation="MIEQVLDVRTIQPHDRHATIFARFDGLPPGGRLVLANDRDPRPL
                     YYQFTAQRPGEFEWTYLEAGPALWQVRIARVAAAPAERGSSCCGSCG"
     gene            961..1275
                     /locus_tag="VLL76_04790"
     CDS             961..1275
                     /locus_tag="VLL76_04790"
                     /inference="COORDINATES: protein motif:HMM:NF013999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HSV28846.1"
                     /translation="MLRQLRLTRMDAITDALKTVIDPDIGINIVDLGLVETVDDSAEP
                     VTIGLVMTSPACPQAGYIADQCGEVLAALGIRAEISVLDDPPWQPGRMSATARAALGW
                     DE"
     gene            1272..2321
                     /locus_tag="VLL76_04795"
     CDS             1272..2321
                     /locus_tag="VLL76_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28847.1"
                     /translation="MTVAARRLPILALGAVSLVAGLAAGLSRAGIEVPAAQLALAHGP
                     LMVSAFFGTVIGLERAVAARRRWAYAAPLACGAGGIMLVAGLGIAGAVLVTLGSVLFL
                     AVMLAIARSRWDGHLVILVMGACCWATGNLAWLLWDDVGRVVVAWAAFLVLTIFGERV
                     ELGRFGPPLAGKHESANLVAACLVVSGFFGLAASGIAWPVFGAALLLAAAWLWRYDVA
                     RHTIRLTGLTRYIAICLLSGYAWLAVAGVWAMAGIGDAFAYDAVLHALFVGFVFSMVF
                     GHAPVILPAVLGIKLPFNRLAYGALAALHLSLALRLAGDAMADPDLRAMGTVANAATL
                     GGWIVLNLVTALRRR"
     gene            complement(2299..3150)
                     /locus_tag="VLL76_04800"
     CDS             complement(2299..3150)
                     /locus_tag="VLL76_04800"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HSV28848.1"
                     /translation="MKRRRFLRIAAAAGLVAASPARAFRLQPVEWRGVAIGAPASLTI
                     DHEDRAEGLRLAQACMAEIERLEQVFSLYRESALVRLNRDGFLDTPPLDLVRLLGMAD
                     RFRRATGGAFDPTVQPLWQLHARHFAQPGADPAGPPLHELERARALVGWRDVAVDPAR
                     IEFRRPGMAVTLNGIAQGYVTDKVADLLRRAGMRHVLVNMGEIAAIGRWRVGMPDGTA
                     RSLADRALAVSDPDGTRFSPLCHHIFDPASGRSAAGGGWVAACADTAAEADALSTAMA
                     ISGGGAR"
     gene            complement(3147..>3634)
                     /locus_tag="VLL76_04805"
     CDS             complement(3147..>3634)
                     /locus_tag="VLL76_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HSV28849.1"
                     /translation="AACGDDEQAAAPPPAAMSEAAIGHYCGMALADHPGPKGQVQTRS
                     RKEPYWFSSARDTLAFAMLPEEPKDIAAMYVTAMDKATDWAKPGPDTWVAARTAFYVV
                     GSDAKGGMGQAEIVPFSSREAAQAFADQHGGNVVPFDQVPRDAVLGGDTPAAQHPGGH
                     K"
BASE COUNT          471 a         1233 c         1311 g          619 t
ORIGIN      
        1 cgctgaaata gaacagcgcg acccgttggg acgtgtactt catcgctcgc ctcctcagcc
       61 ggccttatgg ggcggccagt tctgggtctt gaccgaatcc gtccagcgga agaattcgac
      121 cagatcgtcc agttcctgtt ccgtcaggtt gaattgcggc atctggcggc ggccctcggc
      181 accggtgggc tgggccttga tccacgcctt gagcgcgtca cttgcggcga cggcatcctc
      241 gcggccgcca tagcggtccc agacgttgcc cagttcgggc gcgaaatagg cgccttcgcc
      301 gatcagcgag tggcaattga tgcaggagtt cttttcccac acatgcttgc cgcgtgcgac
      361 cgcgtcggtc agggtggctt tgttggtgga cgtttcgacg acataggtgt ggctgtgcgc
      421 caccaggccg acgaagacga tgaagaaggc ggccgtgccc ccgtagaaaa tgttccgggc
      481 cgccgccttc gtgagtcgct ccgacatggt cggtcccctc tgaggcaatt gacgatggcg
      541 cggcgcggct caatggctga gcgcgacgct tggtcattgt ctaaacgctg cgccgtccca
      601 tcactttgac tgtggtcaac cgcgcgccct tgacctgcgt caatcgccgc cagaccgtac
      661 tcgggatagg gtcggggcaa tgagtttcag caaagggtac caaggtatga tcgagcaggt
      721 tctggacgtc cgcaccattc agccgcacga ccgccacgcc accatcttcg cccgcttcga
      781 cggcctgccg ccgggcggca ggctggtcct cgccaacgac cgcgacccac ggccgctgta
      841 ctaccagttc accgcccagc gtccgggcga attcgagtgg acctacctgg aggccggccc
      901 cgccctgtgg caggtgcgca tcgcccgggt ggcggcggcg ccggccgagc gcggctcgtc
      961 gtgctgcggc agttgcggct gacccgcatg gacgccatca ccgacgccct caagacggtg
     1021 atcgaccccg acatcgggat caacatcgtc gatctggggc tggtcgagac ggtggacgac
     1081 agtgccgagc cggtgaccat cggcctggtg atgacctcgc cggcctgccc ccaggccggc
     1141 tacatcgccg atcaatgcgg cgaggtgctc gcggcgttgg gcatccgcgc cgagatcagc
     1201 gtgctcgacg acccgccctg gcagcccggc cgcatgtcgg ccaccgccag ggccgcgttg
     1261 ggatgggatg aatgacggtg gcagcgcgcc ggctgccgat cctggcgctt ggggcggtgt
     1321 ccctggtggc ggggctggcc gccggcctgt cgcgtgccgg cattgaggtg ccggcggcgc
     1381 aactcgccct ggcacacggg ccgctgatgg tgtcggcctt cttcggcacc gtcatcggcc
     1441 tggagcgcgc ggtggccgcc cgccgccgct gggcctatgc ggcgccgctg gcctgtggcg
     1501 ccggcgggat catgctggtt gcgggcctcg gcatcgcggg ggccgtgctg gtgacccttg
     1561 gcagcgtcct gttcctggcc gtcatgctgg ccatcgcccg gtcgcgctgg gacggtcact
     1621 tggtgatcct ggtgatggga gcctgctgct gggccaccgg caatctggcc tggctgttgt
     1681 gggatgacgt cggccgggtg gtggtggcct gggcggcgtt cctggtgctc accatcttcg
     1741 gcgagcgggt cgagttgggc cgcttcgggc cgccgctggc cggcaagcat gaaagcgcca
     1801 acctggtggc cgcctgtctg gtcgtctccg gtttcttcgg gctggcagca tcgggcatcg
     1861 cctggccggt cttcggcgcg gcgctgctgt tggcggcggc ctggctgtgg cgctacgacg
     1921 tcgcgcgaca caccatccgc ctcaccggcc tgacccgcta tatcgcaatc tgcctgctgt
     1981 ccggctatgc ctggctggcg gtggccgggg tgtgggcgat ggcggggatc ggcgatgctt
     2041 ttgcctatga cgccgtgctg catgccctgt tcgtcggttt cgtgttctcg atggtgttcg
     2101 gccacgcacc ggtgatcctg ccggcggtgc tggggatcaa gctgccgttc aaccggctgg
     2161 cctatggcgc cctggcggcg ttgcacctgt cgctggcgtt gcgattggcg ggcgacgcca
     2221 tggccgatcc ggacttgcgg gcaatgggca ccgtcgccaa tgccgccaca ttgggcggct
     2281 ggatcgtgct gaacctggtc accgcgctcc gccgccgctg atcgccatgg cggtggatag
     2341 cgcgtccgct tcggcagcgg tgtcggcgca ggccgcgacc cagccgccac cggccgcact
     2401 gcgccccgag gccgggtcga agatgtggtg gcaaagaggg ctgaagcggg tgccgtcggg
     2461 gtcggacacc gccaaggcgc ggtcggcgag ggaccgcgcc gtgccgtccg gcatcccgac
     2521 ccgccacctg ccgatggccg cgatttcccc catgttcacc agcacgtgcc gcatgcccgc
     2581 ccgccgcagc aggtcggcca ccttgtcggt gacatagccc tgggcgatgc cgttgagggt
     2641 gacggccatg ccggggcggc ggaattcgat gcgcgccgga tcgacggcga cgtcgcgcca
     2701 ccccaccagc gctcgcgccc gttccaactc atggagcggc ggaccggctg gatcggcgcc
     2761 cggttgggcg aaatggcggg catggagctg ccacagcggc tgcaccgtgg ggtcgaaggc
     2821 gccgccggtg gcgcgccgaa agcggtcggc catgcccagc agccgcacca gatcgagcgg
     2881 cggcgtatcg aggaagccgt cgcggttcaa ccgcaccagc gccgactcgc gatagaggct
     2941 gaacacctgt tccagccgtt cgatctcggc catgcaggcc tgggccagcc gcaggccctc
     3001 ggcccggtcc tcgtggtcga tggtcaggct ggcgggggcg ccgatggcca cgccgcgcca
     3061 ttccaccggt tgcaggcgga aggctcgggc cggcgaggcc gccaccagcc cggccgccgc
     3121 cgcgatgcgc aggaaccgcc gccgcttcat ttgtgcccgc ccggatgctg cgcggcgggg
     3181 gtgtcgccgc ccagcaccgc gtcgcgcggc acctggtcga acggcaccac gttgccgccg
     3241 tgctggtcgg cgaaggcctg ggccgcctcg cggctgctga acgggacgat ctcggcctgc
     3301 cccatgccgc ccttggcgtc gctgcccacc acatagaagg cggtgcgcgc cgcgacccag
     3361 gtgtcggggc cgggcttggc ccagtcggtc gccttgtcca tggcggtgac gtacatggcg
     3421 gcgatgtcct tgggttcctc gggcagcatt gcaaaggcca gggtgtcgcg cgccgacgag
     3481 aaccaatagg gttccttgcg gctgcgagtc tggacctggc ccttggggcc gggatggtcg
     3541 gccagcgcca tgccgcaata atggccgatg gcggcctcgg acatggcggc gggcggcggc
     3601 gcggcggcct gctcgtcgtc gccgcaggcg gcaa
//
LOCUS       DATIKR010000304         2772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_234452, whole genome shotgun sequence.
ACCESSION   DATIKR010000304 DATIKR010000000
VERSION     DATIKR010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234452"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VLL76_04810"
     CDS             complement(<1..659)
                     /locus_tag="VLL76_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSV28850.1"
                     /translation="MARIVMTDDGITFDGRTLDERPLGGAETSFIEMANALARRGHEV
                     LVCNKCEAEIVHRGVTWRPIAQGVPDTADLYVANRGDKLIRLVPAAKKTIFWIHNPAG
                     YLLKWRYQWKLALRRPVIVFSGASHAGTYPGWAVAGGRETVLYGLTDLFCHASERAAA
                     PPPKVVFTSNPLRSLDWLLDVWEARIRPRVPNAELHVFAGSATYGAAGQAKAGRMGAV
                     L"
     gene            complement(661..1416)
                     /locus_tag="VLL76_04815"
     CDS             complement(661..1416)
                     /locus_tag="VLL76_04815"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV28851.1"
                     /translation="MIRLSALVVVHNEEKRLAACLDKLAFADEIVVVLDKCTDGTKDI
                     AARYTDRLVEGSWDIEGDRRNTGIKACSGEWVLEVDADEHVPPALAEEIRRTIETTAF
                     DWHEIPVDNYIGERLVRHGWGGSYGKAAYPGLFRKDAKVWGRDRVHPALKWSGRKGPM
                     LTQRLDHYVDRNISDMIKRLDSYSTAKARDLRERGQTWGSFGRNVVRMASRFFKCYVK
                     RGGYKEGGYGLVIAICAALYPMLSHLKATHEKD"
     gene            complement(1413..2549)
                     /locus_tag="VLL76_04820"
     CDS             complement(1413..2549)
                     /locus_tag="VLL76_04820"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSV28852.1"
                     /translation="MTKVLLNAVHAKSGGGVTYLRNILPLLAARPELTIELVVQAEQA
                     EMARALVPGLPVHVLPSLSNIRTVFVQEQLDIPRLARQIGADVVFSPANFGPLFGTNV
                     ILLRNAFEVGRLEERFSKRLYWFVVKWLSQVSFMACKRAICVSRHAADNFLKAFGRPG
                     DPRVEIVPHGVSPLFTPGDEDARIPRRLLAVSDIYVQKNFETLLDAVALLAPDFPELR
                     LDIAGRPLDGEYLGELKGRVERLGIGDRVSFLGGLPAAEVAELYRRAELFVFPSLVET
                     FGNPLLEAMASGLPVVVSNAAAMPEVAGGAALLAAPGDAADMADKIRALLTDRALWRE
                     RAGAGIARAAQFTWARTAEATARVLVEAAGKWHPAAAQSTKENA"
     gene            complement(2546..>2772)
                     /locus_tag="VLL76_04825"
     CDS             complement(2546..>2772)
                     /locus_tag="VLL76_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF364 domain-containing protein"
                     /protein_id="HSV28853.1"
                     /translation="TLPRLLHLARDARVALVGPGAPLTPRLFDYGIDVLAGLVATDAE
                     GLVACVAGGGGPRDIKRFCRQAAISRPEAP"
BASE COUNT          430 a          937 c          988 g          417 t
ORIGIN      
        1 tccagcaccg cgcccatgcg gccggccttg gcctggccgg cggcgccgta ggtggcggag
       61 ccggcgaaga cgtgcagttc ggcgttgggc acgcgcgggc ggatgcgggc ttcccacacg
      121 tccagcagcc agtccagcga gcgcagcggg ttcgaggtga acaccacctt gggcggcggc
      181 gcggcggcgc gctcgctggc gtggcagaac aagtcggtca ggccgtacag caccgtctcg
      241 cgcccgccgg cgacggccca gccgggatag gtgccggcgt ggctggcgcc cgagaacacg
      301 atcaccgggc ggcgcagcgc cagcttccac tgatagcgcc acttcaacag gtagccggcg
      361 ggattgtgga tccagaagat ggtctttttc gccgcaggca ccagccggat cagcttgtcg
      421 ccgcggttgg cgacgtagag gtcggcggtg tcgggcacgc cctgggcaat gggccgccag
      481 gtgacgccgc gatggacgat ctcggcctcg cacttgttgc acaccagcac ctcgtggccg
      541 cgccgcgcca gggcgttggc catctcgatg aacgaggtct cggcgccgcc cagcggccgc
      601 tcgtccagcg tgcggccgtc gaaggtgatg ccgtcgtcgg tcatgacgat gcgggccatg
      661 tcagtccttt tcgtgggtgg ccttgaggtg cgacagcatc gggtagagcg cggcgcagat
      721 ggcgatcacc aggccgtagc cgccttcctt gtagccgccg cgcttgacgt agcatttgaa
      781 gaagcggctg gccatgcgca ccacgttgcg gccgaagctg ccccaggtct ggccgcgctc
      841 gcgcaggtcg cgggccttgg cggtggaata ggaatccagc cgtttgatca tgtccgagat
      901 gttgcggtcg acgtaatggt ccagccgctg tgtcagcatc ggccccttgc ggccgctcca
      961 tttcagcgcc gggtggacgc ggtcgcggcc ccacaccttg gcgtccttcc tgaacaggcc
     1021 gggataggcg gccttgccgt agctgccgcc ccagccgtgg cggaccagcc tttcgccgat
     1081 gtaattgtcc accgggattt catgccagtc gaaggcggtg gtctcgatgg tgcggcggat
     1141 ttcctcggcc aaagcgggcg gcacatgctc gtcggcatcc acctccagca cccattcgcc
     1201 ggaacaggct ttgatgccgg tgttgcggcg gtcgccctcg atgtcccaac tgccctcgac
     1261 caggcggtcg gtgtagcggg cggcgatgtc cttggtgccg tcggtgcatt tgtcgagcac
     1321 caccacgatc tcgtcggcga aggccagctt gtccaggcag gcggccaggc gcttttcctc
     1381 gttgtggacg accaccaggg cggacaggcg gatcacgcgt tttccttcgt cgattgggcg
     1441 gcggcaggat gccatttccc ggcggcttcc accagcaccc gcgcggtggc ctcggcggtg
     1501 cgggcccagg tgaactgggc ggcccgcgcg atgccggcgc cggcccgctc gcgccacagc
     1561 gcgcggtcgg tcagcagggc gcggatcttg tcggccatgt cggcggcatc gccgggggcg
     1621 gccagcaggg cggcaccgcc cgccacctcg ggcatggcgg cggcattgga caccaccacc
     1681 ggcaggcccg acgccatggc ctcgagcagc ggattgccga aggtttccac cagcgacggg
     1741 aacacgaaca attcggcgcg gcggtacaat tccgccacct cggccgccgg caacccgccc
     1801 aggaaggaaa cgcggtcgcc gatgcccaaa cgctcgacgc ggcccttcaa ctcgcccagg
     1861 tattcgccgt ccagcggccg gccggcgatg tcgaggcgca gctcggggaa gtcgggggcc
     1921 agaagcgcca ccgcgtccag cagcgtctcg aaattcttct gcacatagat gtcggacacc
     1981 gccagcaggc ggcgggggat gcgggcgtcc tcgtcgcccg gcgtgaacag cggcgagacg
     2041 ccatgaggca cgatctcgac gcggggatca ccgggacggc cgaacgcttt caggaaattg
     2101 tcggccgcat ggcgcgacac gcagatggcg cgcttgcagg ccataaacga cacctgcgac
     2161 agccacttga ccacgaacca atagagccgc ttcgagaagc gttcctccag ccgcccgacc
     2221 tcgaaggcgt tgcgcagcag gatgacgttg gtgccgaaca acggcccgaa attggctggc
     2281 gagaacacca cgtcggcgcc gatttgccgg gccaggcggg ggatgtcgag ctgttcctgc
     2341 acgaacacgg tgcggatgtt ggacaggctg ggcagcacgt gcaccggcag gccgggcacc
     2401 agggcgcgcg ccatctcggc ctgctccgcc tgcaccacca gttcgatggt gagttccggc
     2461 cgcgccgcca gcagcggcag gatgttgcgc agataggtga cgccgccgcc cgacttggcg
     2521 tgcacggcat tcagcaaaac cttggtcacg gcgcctccgg ccggctgatg gccgcttggc
     2581 ggcagaagcg cttgatgtcg cgcggccccc cgccgccggc gacgcaggcg accaggcctt
     2641 cggcatcggt ggcgaccagc ccggccagca cgtcgatgcc gtagtcgaac aggcgcgggg
     2701 tcagcggcgc accggggccg accagggcga cgcgggcgtc gcgggccaga tgcagcaggc
     2761 gcggcagggt gc
//
LOCUS       DATIKR010000305         2643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_161697, whole genome shotgun sequence.
ACCESSION   DATIKR010000305 DATIKR010000000
VERSION     DATIKR010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161697"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VLL76_04830"
     CDS             complement(<1..357)
                     /locus_tag="VLL76_04830"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV28854.1"
                     /translation="MSLADSLAARIRRDGPIPVSDYMAEALSHYYGGRDPFGEAGDFT
                     TAPEISQMFGELIGLWCVAVWRMMGTPAALRLVELGPGRGTLMADLLRAASADRAFIA
                     AASVHLVETSPALRARQ"
     gene            complement(359..1168)
                     /gene="lgt"
                     /locus_tag="VLL76_04835"
     CDS             complement(359..1168)
                     /gene="lgt"
                     /locus_tag="VLL76_04835"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HSV28855.1"
                     /translation="MFSIAYPHIDPIAIQLGPIAIRWYAIAYIAGLMLGWSYIKWLVR
                     RPPHAMREVDVDDFLVWATLGVVLGGRLGYVLFYKPAYYLTHPLEVFFLWQGGMAFHG
                     GALGVILAIILFSKRRGLNLFAVGDVVTCAVPIGLFFGRIANFINGELFGRVAQDVPW
                     AMIFPGGGPDPRHPSQLYEAALEGLVLFLVLHLLWRNRAIRDRKGTLAGIFLMGYGIA
                     RIIAEFFRQPDAHLGFLWGGATMGQLLSIPLLLAGLGVILWANRPNRPLHR"
     gene            complement(1280..2266)
                     /gene="rfaD"
                     /locus_tag="VLL76_04840"
     CDS             complement(1280..2266)
                     /gene="rfaD"
                     /locus_tag="VLL76_04840"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015467266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HSV28856.1"
                     /translation="MIVVTGGAGFIGSNILAALEARGAGKLVVCDRLRSNDKWKNVAK
                     RELADIVHPEQLFDFLEANHKHIQAIFHMGAISATTETDADKIAANNFSLTLALWKWC
                     AMSNVRLIYASSAATYGDGAAGFDDDWSIEHLAKLQPLNAYGWSKHLFDRRVARKIAS
                     GSRKPPQFVGLKFFNVYGPNEYHKGGQQSVVSQIFPHAKEGAAYHLFRSHNPKYKDGG
                     QMRDFIWIDDCVDVMMWLLDNPQVNGIFNVGTGQARTFLDLANAVYRAVGKEPNIKFQ
                     DTPVAIRDKYQYFTQANMDRLRAAGYRKPFTALEEGVARYVQDYLDRPDRYK"
     gene            2399..>2643
                     /locus_tag="VLL76_04845"
     CDS             2399..>2643
                     /locus_tag="VLL76_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018632048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HSV28857.1"
                     /translation="MQTQNPFFDDLARMAGGALGALSGLKAEVEALVRQQMEKMTAGM
                     DMVSREEFEAVRDMASKARTENEALAKRVAELEAHLSA"
BASE COUNT          447 a          818 c          939 g          439 t
ORIGIN      
        1 ctgtctggcc cgcaaggccg ggctggtttc caccagatgc accgacgccg cggcgatgaa
       61 cgcccggtcg gccgaggcgg cgcgcagcag atcggccatc agggtgccgc ggcccggtcc
      121 cagctcgacc agccgcagcg cggccggcgt tcccatcatg cgccacacgg cgacgcacca
      181 caggccgatc agttcgccga acatctggct gatctcgggc gcggtggtga agtcgccggc
      241 ctcaccgaac gggtcgcggc cgccgtagta atggctcagt gcctcggcca tgtagtccga
      301 gaccggaatg gggccgtcgc ggcggatgcg tgccgccagg ctgtcggcaa ggctcatgtc
      361 agcggtgcag cggtctgttg ggtcggttgg cccacaatat gaccccgagg ccggccagca
      421 gcagggggat ggacagcaat tgccccatcg tcgcgccgcc ccacaggaag ccgagatggg
      481 cgtcgggctg gcggaagaac tcggcgatga tgcgggcgat gccgtagccc atcaggaaga
      541 tgccggccag cgtgcccttg cggtcgcgga tggcgcggtt gcgccacagc agatgcagca
      601 ccaggaacag caccaggcct tccagcgccg cctcgtagag ctggctggga tggcgcgggt
      661 cggggccgcc gccggggaag atcatggccc acggcacgtc ctgggcgacc cggccgaaca
      721 gctcgccgtt gatgaaattg gcgatgcggc cgaagaacag gccgatgggc acggcgcagg
      781 tcaccacgtc gcccaccgcg aacaggttga ggccgcgccg cttcgagaac aggatgatgg
      841 ccaggatgac gccgagcgcg ccgccgtgga aggccatgcc gccctgccac aggaagaaca
      901 cctccagcgg atgggtcagg taataggccg gcttgtagaa cagcacgtag cccagccggc
      961 cgcccagcac cacgcccagc gtcgcccaca ccaggaagtc gtcgacgtcg acctcgcgca
     1021 tggcgtgggg cggccggcgc accagccact tgatgtacga ccagcccagc atcagcccgg
     1081 cgatgtaggc gatggcgtac cagcggatgg cgatcggccc caactggatg gcgatcgggt
     1141 cgatgtgggg ataggcgatg gagaacatga ctgctcctgc tcttgtcatc ctgagggagc
     1201 gctgcgaccg aaggatcttt caggcgatac ccgggccggg tgaaagatcc ttcgctacgc
     1261 tcaggatgac aggctgcggt tacttgtagc ggtcggggcg gtccaggtaa tcctggacat
     1321 agcgggcgac gccctcttcc agcgccgtga acggcttgcg gtagccggcg gcgcgcaggc
     1381 ggtccatgtt ggcctgggtg aagtactggt acttgtcgcg gatggcgacc ggcgtgtcct
     1441 ggaacttgat gttgggttcc ttgccgacgg cgcggtagac cgcgttggcg aggtccagga
     1501 aggtgcgggc ctggccggtg ccgacgttga agatgccgtt gacctgcggg ttgtccagca
     1561 gccacatcat cacgtcgacg caatcgtcga tccagatgaa gtcgcgcatc tggccgccgt
     1621 ccttgtattt cggattgtgc gaccggaaca ggtgataggc cgcgccttcc ttggcgtgcg
     1681 ggaagatctg gctgaccacg ctctgctggc cgcccttgtg gtattcgttg gggccgtaga
     1741 cgttgaagaa cttcaggccg acgaattgcg gcggcttgcg cgagccggac gcgatcttgc
     1801 gggcgacgcg gcggtcgaac aaatgcttgg accagccata ggcgttgagc ggctgcagct
     1861 tcgccaggtg ctcgatcgac cagtcgtcgt cgaagccggc cgcgccgtcg ccataggtcg
     1921 ccgcgctgga ggcgtagatc aggcggacgt tgctcatggc gcaccacttc cacagcgcca
     1981 gcgtcagcga gaagttgttg gcggcgatct tgtcggcgtc ggtctcggtg gtggccgaga
     2041 tggcgcccat gtggaagatg gcctggatgt gcttgtggtt ggcttccagg aagtcgaaca
     2101 attgctcggg gtggacgatg tcggccagct cgcgcttggc gacgttcttc cacttgtcgt
     2161 tcgagcgcag gcggtcgcac acgaccagct tgccggcgcc gcgcgcttcc agcgcggcca
     2221 gaatgttcga gccgatgaac ccggccccac cggtgacgac gatcatcctg gcgctctccc
     2281 tgtattagcc ttcgggcgtt tataggccgc ggcggggaag cgggcaagcc atgtgggcgt
     2341 ttgcatttcg gccgatcctc accataatgc ggcaactcat ttcgattcgg tggacgccat
     2401 gcagacccag aaccccttct tcgacgatct cgcccgcatg gccggtggcg cgctgggcgc
     2461 gctgtcgggc ctcaaggccg aggtcgaggc gctggtgcgc cagcagatgg agaagatgac
     2521 cgccggcatg gacatggtca gccgcgagga attcgaggcc gtgcgcgaca tggcgtcgaa
     2581 ggcgcggacc gagaacgagg cgttggccaa gcgcgtcgcc gagctggagg cgcatttgtc
     2641 cgc
//
LOCUS       DATIKR010000306         1683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_113277, whole genome shotgun sequence.
ACCESSION   DATIKR010000306 DATIKR010000000
VERSION     DATIKR010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113277"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /locus_tag="VLL76_04850"
     CDS             <1..856
                     /locus_tag="VLL76_04850"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV28858.1"
                     /translation="ATVVGGSGSDTITTGQGDELVFGDAMTEGAGVLVPLVIDAGLAD
                     TDGSESLAIALSGLPDGATLVDGSGAAVGTLSGGAWMLTPDQLGGLAIALPDGAPTSF
                     TLTVSAGATEAVGGDAAWTSVPVSVALGTIGEGDDVIATGLGKDTVHGGGGDDVIHGE
                     GGADRLFGGSGDDVILGGDQGDVIVGGAGDDVLVGGDHADTFLFELGSGHDMVDGGDR
                     NWTDTIDLTGLTPGTGFTITTESGESWTVAADEAQHELDLGDNVAGTIVTDAGDRIDF
                     ENIEEVRW"
     gene            1088..1468
                     /gene="sdhC"
                     /locus_tag="VLL76_04855"
     CDS             1088..1468
                     /gene="sdhC"
                     /locus_tag="VLL76_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HSV28859.1"
                     /translation="MTTRNRPLSPHLDIYRLPLLAIMSITHRITGIGLVLGLFLLAWW
                     LGAAASGPEAFAAAQGFMGSWLGYLLLFGWSVALFFHLGHGIRHLLWEAGWGFEIPQA
                     YASAKVALGATAVLTVIAWIAGLA"
     gene            1480..>1683
                     /locus_tag="VLL76_04860"
     CDS             1480..>1683
                     /locus_tag="VLL76_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HSV28860.1"
                     /translation="MTLRSPIGRARGLGSAKEGAGHSWATIVTAVGLVPLSLWFVISV
                     IGLAGIDYAGFQAWIGRPFNASMM"
BASE COUNT          249 a          572 c          574 g          288 t
ORIGIN      
        1 cgccaccgtg gtcggcggca gcggctccga caccatcacc accggccagg gcgacgaact
       61 ggtgttcggc gacgccatga ccgaaggcgc cggcgtgctg gtgccgctgg tgatcgatgc
      121 cggcctggcc gacaccgacg gctcggaaag cctggccatc gcactgtccg gcctgccgga
      181 cggggctacc ctggtggacg gttccggcgc ggcggtcggc accctgtcgg gtggcgcctg
      241 gatgctgacg cccgaccagt tgggcggcct cgccatcgcg ctgccggacg gcgcaccgac
      301 cagcttcacc ctgaccgtct ccgccggcgc caccgaggcg gtgggcggcg acgcggcctg
      361 gaccagcgtg ccggtcagcg tcgctctcgg caccatcggc gagggcgacg acgtcatcgc
      421 caccggcctg ggcaaggaca ctgttcatgg cggcggcggc gacgacgtca tccatggcga
      481 aggcggcgcc gaccggttgt tcggcggcag cggcgacgac gtgatcctgg gcggcgacca
      541 gggcgacgtg atcgtcggcg gtgccggcga cgacgtgctg gtgggcggcg accatgccga
      601 caccttcctg ttcgagctgg gctcgggcca cgatatggtg gatggcggcg accgcaactg
      661 gaccgacacc atcgacctga ccggcctgac cccgggcacc ggcttcacca tcaccaccga
      721 gagcggcgaa agctggacgg tggcggcgga cgaggcgcag cacgaactgg atctcggcga
      781 caacgtggcg ggcaccatcg tcaccgacgc gggtgaccgt atcgacttcg aaaacatcga
      841 agaagtgcgg tggtagggtg attatatgcg gataacgcaa cgctgccctc gctttaggcg
      901 ggtctgatac caattcggcc tggaatcggc ataatttccc accccgccgg gtgggcaaag
      961 gttggttgac cccgccaaaa agtgtggccc cctgccgttg acttaaatgg cccaagggga
     1021 tacacatgcc gcgatgccgc ataaggggtt tgatccccat cccaagctca caggggcttt
     1081 tctcgccatg accacgcgca atcgcccgct ttcccctcat ctcgacatct atcgcctgcc
     1141 cctgctggcg atcatgtcga tcacccaccg catcaccgga atcggtctgg tgctggggtt
     1201 gttcctgctg gcctggtggc tgggcgccgc cgcttccggc cccgaggcgt tcgccgccgc
     1261 tcagggcttc atgggcagct ggctcggcta ccttctgctg ttcggctgga gcgtcgccct
     1321 gttcttccac ctcggccacg gcatccgcca ccttctgtgg gaagcgggct ggggcttcga
     1381 gattccgcag gcttacgcct cggccaaggt cgcgctgggc gcgaccgccg tgctgaccgt
     1441 aatcgcctgg atcgccggtc tggcgtgagg gagagtgaca tgaccctgcg ttcccccatc
     1501 ggccgcgcgc gcggccttgg ctcggccaag gaaggcgctg gccattcctg ggccaccatc
     1561 gtcacggcgg tcggcctggt gccgctcagc ctgtggttcg tgatttcggt gatcggcctg
     1621 gccggcatcg actatgccgg cttccaggcc tggatcggcc gtccgttcaa cgcgtcgatg
     1681 atg
//
LOCUS       DATIKR010000307         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_16435, whole genome shotgun sequence.
ACCESSION   DATIKR010000307 DATIKR010000000
VERSION     DATIKR010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16435"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1474)
                     /locus_tag="VLL76_04865"
     CDS             complement(182..1474)
                     /locus_tag="VLL76_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSV28861.1"
                     /translation="MPVAPHALGALDAVMMIEAGSLTAEALTLSCLDRIAEREDAVGA
                     WEWIDRDGALAAAHALDRGPRKGLLHGLPVAVKDTVDVAGMPTRMGSPIYVKAAPAAI
                     DAASVALMRARGGVMLGKTVTTEFANFHPGKTRNPLNPEHTPGGSSSGSAAAVADRMV
                     PLALGTQTAGSVLRPAAFCGVVGYKPSFGLIPRAGAKALADSLDTIGSLARDVPDAAL
                     LAAAMAGDDRLAIGRDKPDQPPTIGFCRTSEWRHAQPATAAAFEAVRRAATKAGALVK
                     DIELPPEFQRLAEAQATIQAVETARSLATERLTHPRLLSDRLRKQIDEAGRIPLARYA
                     DAVTLVGRCRTMLAGVLHGADVAVAPTAPGAAPQGLSSTGDPVFNRIWTALHGPAIHV
                     PGLSDGAGLPLGVTVAGRFGDDRRVLLAAHWLFLTLHP"
     gene            1636..>2416
                     /locus_tag="VLL76_04870"
     CDS             1636..>2416
                     /locus_tag="VLL76_04870"
                     /inference="COORDINATES: protein motif:HMM:NF018439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1207 domain-containing protein"
                     /protein_id="HSV28862.1"
                     /translation="MPFTPSGRNWLGLAAVVVGLFAGPSLRAEEAELLPRQVLFEPLV
                     ADPRWPHFSAAWHSYGGDGRLDNVGTVSFGDDFSLYQEAAGQGRWGIGFQAGVFAIFD
                     LDAESSDLVNADYWVGVPVSWREGPWQARGRVFHQSSHLGDEFLLRVRPERVNLSYEG
                     IDLKLSRMLADDSLRLYGGTGYLVHRIPEDLDPWSLQLGAEYRAPWTLADGYLRPVAA
                     VDLQSTEEAGWQVDVSTRLGFELESPYDRAYRVLLTLEYFNG"
BASE COUNT          346 a          806 c          895 g          369 t
ORIGIN      
        1 gatctctcgc caacagggcc tcgggtctgt cgcccgattg cggggccggc atccgccgga
       61 cgcgactggt atgacctttt tcgttgcttg gaacagtgta gcggcgcggt cgggtttgtc
      121 catatgcggc ccaatcaacc acttggctta cctagagata aagtccgact aaatggctat
      181 atcaagggtg cagggtgaga aatagccaat gggcggccaa cagcacccgg cggtcgtcgc
      241 cgaagcggcc ggcgacggtg acccccagcg gcaggccggc gccgtcggac aggccgggca
      301 cgtggatggc ggggccgtgc agggcggtcc agatgcggtt gaacaccggg tcgccggtgg
      361 acgacaggcc ctgcggcgcg gcgccgggcg cggtgggcgc caccgccacg tcggcgccgt
      421 ggagcacccc cgccagcatg gtgcggcagc ggcccaccag cgtcaccgcg tcggcatagc
      481 gggccagcgg aatgcggccg gcctcgtcga tctgcttgcg caggcggtcg gacagcagac
      541 ggggatgggt caggcgttcg gtggccagcg agcgggcggt ctcgaccgcc tgaatggtgg
      601 cctgcgcctc ggcaagacgc tggaattcgg gcggcaactc gatgtccttg accagggcgc
      661 cggccttggt ggcggcgcgg cgcacggcct cgaaggcggc ggcggtcgcc ggttgggcgt
      721 ggcgccactc gctggtgcgg caaaagccga tggtgggcgg ctggtcgggc ttgtcgcggc
      781 cgatggccag gcggtcgtcg cccgccatgg cggcggccag caatgcggcg tcgggcacgt
      841 cgcgggccag gctgccgatg gtgtccaggc tgtcggccaa cgccttggcg ccggcgcgcg
      901 ggatcagccc gaagctgggc ttgtagccga ccacgccgca aaacgcggcc gggcgcagca
      961 ccgagccggc ggtctgggtt cccagcgcca gcggcaccat gcgatcggcc accgccgccg
     1021 ccgagcccga ggacgaaccg cccggggtgt gctcggggtt caacggattg cgggtcttgc
     1081 cggggtggaa attggcgaat tcggtggtga cggtcttgcc cagcatcacc ccgccccgcg
     1141 cccgcatcag cgccaccgag gcggcgtcga tggccgccgg ggccgccttg acgtagatgg
     1201 gcgagcccat gcgggtgggc atgccggcga cgtcgacggt gtccttcacc gccaccggca
     1261 gtccgtgcag caggcccttg cgcgggccgc gatccagcgc atgggcggcg gccagggcgc
     1321 cgtcgcggtc gatccattcc cacgccccca cggcgtcctc gcgctcggcg atgcggtcca
     1381 ggcaggacag cgtcaatgcc tcggcggtga gactgccggc ctcgatcatc atcacggcat
     1441 ccagggctcc cagcgcatgc ggggcgacgg gcatggggca tctctccggg ttggtcacgg
     1501 ctgcgtcatg gtcggtcaaa tcgcccatgc ttgtccacgg gcggaaggca aggggtgggg
     1561 gcgacctcag gccatattgg gcgccgggag ccttggtgcc atcttgccca caagacggag
     1621 cggaacgagg aggccatgcc gttcacccca agcggacgga attggctcgg gctggcggcg
     1681 gtcgtcgtgg gactgttcgc cggcccctcc ttgcgcgccg aggaagccga gctgctgccc
     1741 cgccaagtcc tgttcgaacc gctggtcgcc gacccccgct ggccgcattt ctcggccgcc
     1801 tggcattcct atggcggcga cggacggctg gacaacgtcg gcaccgtgtc gttcggcgac
     1861 gacttttcgc tgtaccagga agcggccggg caggggcggt ggggaatcgg cttccaggcc
     1921 ggcgtgttcg ccatcttcga cctggatgcc gaatccagcg acctggtcaa cgccgattat
     1981 tgggtcggcg tgccggtgtc gtggcgcgag gggccgtggc aagcgcgcgg ccgggtgttc
     2041 caccaaagct cgcacctggg cgacgaattc ctgctgcgcg tccggcccga gcgcgtcaac
     2101 ctcagctacg agggcatcga cctcaagctg tcgcgcatgc tggccgacga cagcctgcgg
     2161 ctttatggcg gcaccggcta tctggtgcac cgcatccccg aggacctgga tccctggagc
     2221 ctgcaactgg gcgccgagta ccgcgcgccg tggaccctgg ccgacggcta tctgcggccg
     2281 gtggcggcgg ttgacctgca aagtaccgag gaagccggct ggcaggtgga cgtgtccacc
     2341 cgcctgggct tcgagctgga atcgccttac gaccgcgcct accgcgtgct gctgaccctg
     2401 gaatacttca acggcc
//
LOCUS       DATIKR010000308         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_89507, whole genome shotgun sequence.
ACCESSION   DATIKR010000308 DATIKR010000000
VERSION     DATIKR010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89507"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VLL76_04875"
     CDS             complement(<1..848)
                     /locus_tag="VLL76_04875"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSV28863.1"
                     /translation="MTKVASQVQSLLLERGLADPSGIERARRVCDASGEALHIVLSKL
                     GLVSERDMAQVLAAATGLPLVTAFPDEPVCPASLKFLKESLVVPVGEQDGELVVATAD
                     PIDDFPLQALAHATGRRIRAVLGTASDIEAAIDRLYGGGAPAEVCEDAASADDEDVAR
                     LRDLAAEAPVIRLVNGLIARAVDSRASDIHIEPAEAALAVRYRVDGVLRDVDAPPRRL
                     QAAVVSRIKIMARLDIAERRLPQDGRIKLSVRGKDVDLRVSTLPSIHGESVVMRILDK
                     GALPLDL"
     gene            complement(944..1381)
                     /locus_tag="VLL76_04880"
     CDS             complement(944..1381)
                     /locus_tag="VLL76_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28864.1"
                     /translation="MIRLFAVVTAAALAGAAVLVVMQPPPPSAVSAEAFPPDCLSTQE
                     KNWGVQVLYVRLSPDRRSVAVRYRVVDPERAKLFNAFLAKARIEEARGGVGLAVVAQP
                     PGAPELGAVHDLTFANPDGALGLRRRVTLQVGPFRLDNLVVRG"
     gene            complement(1462..>1720)
                     /locus_tag="VLL76_04885"
     CDS             complement(1462..>1720)
                     /locus_tag="VLL76_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HSV28865.1"
                     /translation="ELVQCIRLNMDCADVCVATGAVATRRSGSNEQVIRAMLDACATA
                     CRLCAEECERHASDHEHCRICAEACRNCEDACQKAQQSMAH"
BASE COUNT          258 a          593 c          636 g          233 t
ORIGIN      
        1 aggtccagcg gcagcgcccc cttgtcgagg attcgcatga ccacgctttc gccgtggatg
       61 gacggcaggg tcgaaacgcg cagatccacg tccttgccgc gcaccgagag cttgatgcgg
      121 ccgtcctggg gcagccggcg ctcggcgatg tcgaggcggg ccatgatctt gatgcgcgac
      181 acgaccgcgg cttgcagccg gcgcggcggc gcgtccacgt cgcgcagcac gccgtcgacg
      241 cgatagcgca ccgccagggc ggcctcggcc ggctcgatgt ggatgtcgct ggcgcggctg
      301 tccacggcgc gcgcgatcag gccgttgacc aggcggatca ccggcgcctc ggccgccagg
      361 tcgcgcaggc gggcgacatc ctcgtcgtcg gccgaggccg cgtcctcgca cacctccgcc
      421 ggggcgccgc cgccatacag ccggtcgatg gccgcctcga tgtccgaggc ggtgcccagc
      481 acggcgcgga tgcggcggcc ggtggcgtgg gccaaagcct gcagcgggaa gtcgtcgatg
      541 gggtcggcgg tggcgaccac cagctcgcca tcctgctcgc ccaccggcac caccagggat
      601 tccttgagga atttcaggct ggcggggcag accggctcgt ctgggaaggc cgtgaccagc
      661 ggcaggccgg tggccgccgc cagcacctgg gccatgtcgc gttccgacac cagccccagc
      721 ttggacagca cgatgtgcag cgcctcgccg ctggcgtcgc agacgcgccg ggcgcgctcg
      781 atgccggatg ggtcggcaag gccgcgttcg agcaacaggg attgcacctg ggacgccact
      841 ttggtcatcg ctcggaccct tcggggtgga acgatgcgat gttagaggag cgcccccatg
      901 aacgcggcga ggcagacggg gtggcgcggc gtctctttcg tgctcagccc cgcaccacca
      961 ggttatccag acggaacggc ccgacctgaa gggtgacgcg gcggcgcagg cccagggcgc
     1021 cgtcgggatt ggcgaaggtc aggtcgtgga cggcgcccag ctcgggcgcc cctggcggct
     1081 gtgccaccac cgccagcccg acgccgccac gggcttcctc gatgcgggcc ttggcgagga
     1141 aggcgttgaa cagcttggcc cgttccgggt ccaccacccg gtagcgcacc gccaccgagc
     1201 ggcggtcggg cgacaaacgg acatagagaa cctgcacgcc ccagttcttt tcctgggtcg
     1261 acaggcagtc gggcggaaag gcctcggccg agaccgccga cggcggcggc ggctgcatca
     1321 cgacgaggac ggcggccccc gcgagggcgg cggcggtaac gacggcgaac aggcggatca
     1381 tcgacggggc tccgtcccgg ggataccccg ccgatgatag gcaaaaggcc ggcacggccg
     1441 gcagtgggcg tcgggcctaa atcaatgcgc catgctctgc tgagccttct ggcaggcgtc
     1501 ctcgcaatta cggcaggcct cggcgcagat gcggcaatgc tcgtggtccg aggcgtggcg
     1561 ctcgcattcc tcggcgcaca gccggcaggc ggtggcacag gcatccagca tggcgcggat
     1621 gacctgctcg ttcgagccgc tgcggcgggt ggcgaccgcg cctgtggcga cgcagacgtc
     1681 ggcgcagtcc atgttgagcc ggatgcactg caccagctcg
//
LOCUS       DATIKR010000309         2418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_41405, whole genome shotgun sequence.
ACCESSION   DATIKR010000309 DATIKR010000000
VERSION     DATIKR010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41405"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /gene="rph"
                     /locus_tag="VLL76_04890"
     CDS             complement(<1..374)
                     /gene="rph"
                     /locus_tag="VLL76_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HSV28866.1"
                     /translation="MRPSGRAPDQLRVVTLETGFSRYAEGSCLAKFGETHVLCTASIE
                     EKVPPFLRNSGKGWVTAEYGMLPRSTHTRTDREAAKGKQSGRTQEIQRLIGRSLRAVT
                     DLAAMGERQIKVDCDVLQADGGT"
     gene            522..1577
                     /gene="hrcA"
                     /locus_tag="VLL76_04895"
     CDS             522..1577
                     /gene="hrcA"
                     /locus_tag="VLL76_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HSV28867.1"
                     /translation="MFRAQSPGITELNDRSREIFRHIVEAYVQTGEPIGSRTLSRRLT
                     VGLSPATIRNVMADLEDLGLLYAPHTSAGRLPTQLGMRMFVNGLLEVGGIADQERQQI
                     DAQCRAQGKSMEQLLSEAIGALSGLSRCAGMVVAPKMQRSLKQIEFIWLGRGRALVVL
                     VTEDGLVENRLLELPPNVEPSALVEATNFLNARLAGKTLDHVREIVTAELEQQRTQLD
                     QLTQRVVEAGLATWAGGENHSALIVRGQSHLLEDITAVEDLERIRALFEALETSEQFL
                     GLLDLTTSAEGVQIFIGAENELFGVTGCSMIVAPYRDSRERIVGAIGVIGPQRLNYAR
                     IIPMVDYTAKVVGRLIG"
     gene            1595..2182
                     /gene="grpE"
                     /locus_tag="VLL76_04900"
     CDS             1595..2182
                     /gene="grpE"
                     /locus_tag="VLL76_04900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HSV28868.1"
                     /translation="MTQDPKNEQTAEPIEAEVAEQPAEAEESDTAKLEAEIARLKNEV
                     LYAKAETENVRRRLEQQAEDRGKYAVANFAKDVLSVADNLRRALDSTPPAAREGNEIA
                     NTLTVGVEMTERELLSAMERYGIRMVPAMGQRFDPNLHQAMMEVEDSSQAEGTVVMVM
                     QQGYQIHDRLLRPALVGVSKGGPKAPPGEQVDTSA"
     gene            complement(2220..>2418)
                     /locus_tag="VLL76_04905"
     CDS             complement(2220..>2418)
                     /locus_tag="VLL76_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28869.1"
                     /translation="GPAMLDRKRRRKLGAAEFARLAALTAVPRAVLLAEIGWARIVAG
                     IVLYAVLLLLHEPVIGANPWP"
BASE COUNT          405 a          817 c          830 g          366 t
ORIGIN      
        1 gtgccgccgt cggcctgcag cacgtcgcaa tcgaccttga tctggcgctc gcccatggcg
       61 gcgaggtcgg tgacggcgcg caaggaacgg ccgatcaggc gctggatttc ctgggtgcgg
      121 cccgattgct tgcccttggc ggcctcgcgg tcggtgcggg tgtgggtcga gcgcggcagc
      181 atgccgtatt cggcggtgac ccagcccttg ccgctgttgc gcaggaacgg cggcaccttt
      241 tcctcgatgc tggcggtgca cagcacgtgg gtctcgccga atttcgccag gcacgagccc
      301 tcggcatagc gcgagaagcc ggtttccagg gtgacgacgc gaagctggtc gggggcgcgg
      361 ccggagggtc tcatggcggg cggtcttttc ctgtccgatg ggtctggcgg caacctaacg
      421 gcttgcccgg cgtccgtcca cccctcgaag gcctttgctt aagttgacgg cccccctaac
      481 cctcactaga ttccggcaac cgaacggatt gaacggtcag catgtttcgc gcccaaagcc
      541 cagggatcac cgagctgaac gaccgctcgc gcgagatctt ccgccacatc gtcgaggcct
      601 atgtgcagac cggcgagccc atcggctcgc gtacgctgtc gcgccggctg acggtggggc
      661 tgtcgccggc caccatccgc aacgtcatgg cggatctgga ggatttgggg ctgctgtacg
      721 cgccgcacac gtccgccggg cggctgccga cccagttggg catgcgcatg ttcgtcaacg
      781 gcctgttgga ggtaggcggc atcgccgacc aggaacgcca gcagatcgac gcccaatgcc
      841 gcgcccaggg caagagcatg gagcagttgc tgtcggaagc catcggcgcc ctgtcggggc
      901 tgtcgcgctg cgccggcatg gtggtggcgc ccaagatgca gcgctcgctg aagcagatcg
      961 agttcatctg gctggggcgc ggccgcgcct tggtggtgct ggtgaccgag gacgggctgg
     1021 tggagaaccg cctgctggaa ctgccgccca atgtcgagcc ctcggccctg gtcgaggcca
     1081 ccaacttcct caacgcccgc ctggccggca agacgctgga ccacgtgcgc gagatcgtca
     1141 ccgccgaact ggagcagcag cgcacccagc tcgaccagtt gacccagcgg gtggtcgagg
     1201 ccgggctggc gacctgggcc ggtggcgaga accattccgc cctgatcgtg cgcggccagt
     1261 cgcacctgct ggaggatatc accgccgtcg aggatttgga gcgcatccgc gccctgttcg
     1321 aggcgctgga gaccagcgag caattcctcg gcctgctgga cctgaccacc agcgccgagg
     1381 gcgtgcagat cttcatcggc gcagaaaacg agcttttcgg cgtcaccggc tgttcgatga
     1441 ttgtcgcccc ctatcgggat tcgcgcgaac gcatcgtcgg cgccatcggt gtgatcgggc
     1501 cgcagcggct caattacgcc cgcatcatcc ccatggtcga ttacactgcc aaagtggtcg
     1561 gccgcctgat cggataacga gagaaagaga gacgatgacc caggacccca agaacgagca
     1621 gacggctgaa ccgatcgaag ccgaggtggc cgagcagccc gccgaggccg aggaaagcga
     1681 caccgccaag ctggaagccg agatcgcccg gctgaagaac gaggtccttt acgccaaggc
     1741 cgagaccgag aacgtccgcc gccggctgga gcagcaggcc gaggatcgcg gcaagtatgc
     1801 cgtggcgaac ttcgccaagg acgtgctcag cgtcgccgac aacctgcgcc gggcgctgga
     1861 ttccacgccc cccgccgcgc gcgagggcaa cgagatcgcc aacacgctga ccgtcggcgt
     1921 cgagatgacc gagcgcgagt tgctgtccgc catggagcgt tacggcatcc gcatggtccc
     1981 ggccatgggc cagcgcttcg accccaacct gcaccaggcc atgatggagg tcgaggattc
     2041 ctcgcaggcc gagggcacgg tggtgatggt gatgcagcag ggctaccaga tccacgaccg
     2101 cctgctgcgc cccgccttgg tcggcgtctc caagggcggc cccaaggccc cgcccggcga
     2161 gcaggtcgat accagcgcct aaggcagcgc gcgcccggcc atccgcgtgg gtggccgggt
     2221 cacggccacg ggttcgcccc gatcaccggt tcgtgcagca gcagcaggac cgcgtacaag
     2281 acgattcccg cgacaatccg cgcccagccg atctcggcca gcaggacggc gcgcggcacg
     2341 gccgtcagcg ccgccaggcg ggcgaattcc gccgcgccca gcttgcgccg gcgctttcgg
     2401 tccagcatgg cggggccg
//
LOCUS       DATIKR010000310         3238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_65445, whole genome shotgun sequence.
ACCESSION   DATIKR010000310 DATIKR010000000
VERSION     DATIKR010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65445"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VLL76_04910"
     CDS             <1..387
                     /locus_tag="VLL76_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28870.1"
                     /translation="FDPMKRIRAWDRIGEQVSDILAAHPGARLMGDERKVLATLIYYV
                     RPHPFDAVKWNPEGDIDDHFDQTTRLEPGEWRLIYVTEHPDLPGTMASRFEAVEKLAD
                     IHIAITPSFARRVAVWRLDGFKGYGP"
     gene            384..1115
                     /locus_tag="VLL76_04915"
     CDS             384..1115
                     /locus_tag="VLL76_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSV28871.1"
                     /translation="MSPAWERLGRSLRDHPWRWTAAALVPLVIFPAIDITVSGWFFDP
                     VSKSFPARTDEFAEWVRKRMPYFLFAIAGYVIALWAAGEWLKDTVFGVSRRVAAYLVL
                     SLALGPGLIVNVILKDSWGRPRPSTILEFGGPNYFVPPLIVTDQCDTNCSFSSGHGAL
                     GFWPVAFALLVPQPWRPWAIAAALVFGGMVGLVRIAQGGHFLSDVAFSAAITVGVIWW
                     LYRRIVLPGDLASSKNNQPKGSDSP"
     gene            1246..1878
                     /locus_tag="VLL76_04920"
     CDS             1246..1878
                     /locus_tag="VLL76_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HSV28872.1"
                     /translation="MAWNRDNHGNRDRGRGRRDDFGGDMGYEPRPQRSMGGMGGGFGG
                     GGDRNAVTQANVTATVKWFNASKGFGFVAPSDGTPDAFLHISALERAGLAQIAEGATI
                     VCDLGAGQRGPQVVTVHEVDQSTAAPRAPRMDRGGDRGPSETVEGVVKFFSAEKGFGF
                     VAVDEGGKDVFVHVKALERSGIKTLETGQRVRVTTTLGQKGPQADTVALV"
     gene            complement(2026..2397)
                     /locus_tag="VLL76_04925"
     CDS             complement(2026..2397)
                     /locus_tag="VLL76_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28873.1"
                     /translation="MMERLRGAEGSPHCLDYPFKHRLIALAEAEARLCRQSEPDDPRL
                     AALRGANARELELIVDEDGWPTTAEAGDEGTLAALRIALNATERPAFMRRCLTLMKAA
                     VNRGDLPAAHAEELERRLAGL"
     gene            complement(2394..>3238)
                     /locus_tag="VLL76_04930"
     CDS             complement(2394..>3238)
                     /locus_tag="VLL76_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HSV28874.1"
                     /translation="IASGEVLPTAVFTEPNTGSDLGSLRTRAVKEGDSYVVTGNKTWI
                     THASRTDVMTLLVRTNPETKDWRGLSMLIAPKPRGTEADPFPAEGMTGGEIKVLGYRG
                     MKEYELGFDGFKVPAANLLGGVEGQGFKQLMETFESARIQTAARAVGVAQNAMEIGQQ
                     YAKDRVQFGKPIYNFPRVACKIAWMAVETMVARQLTYFSAREKDSDRRCDIEAGMAKL
                     LAARVAWANADNALQVHGGNGYAEEYQISRVLCDARILNIFEGAAEIQAQVIARGLLS
                     GGRG"
BASE COUNT          466 a         1094 c         1109 g          569 t
ORIGIN      
        1 ttcgacccca tgaagcgcat ccgcgcctgg gaccgcatcg gcgagcaggt gtcggacatc
       61 ctggccgccc atcccggcgc ccggctgatg ggcgacgagc gcaaggtgct ggcgacgctg
      121 atctattacg tccggccgca cccgttcgac gccgtcaaat ggaatcccga gggcgacatc
      181 gacgaccatt tcgaccagac caccaggctg gagcccggcg agtggcgcct gatctacgtc
      241 accgagcatc ccgatctgcc cggcaccatg gcctcgcgct tcgaggcagt cgagaagctg
      301 gccgacatcc acatcgccat cacccccagc ttcgcgcgcc gggtggcggt gtggcggctg
      361 gacggcttca aggggtacgg gccatgagcc ccgcctggga acggctgggg cggtcgctgc
      421 gcgaccatcc gtggcggtgg accgccgcgg ccttggtgcc gctggtgatc ttccccgcca
      481 tcgacatcac cgtgtcgggc tggttcttcg atcctgtcag caagagcttt cccgcccgca
      541 ccgacgagtt cgcggagtgg gttcgcaagc gcatgcccta tttcctgttc gccatcgccg
      601 gctacgtcat cgcgctgtgg gcggcgggcg aatggctgaa ggacacggtg ttcggggtgt
      661 cgcgccgcgt cgccgcctat ctggtgctgt cgctggcgtt ggggccgggg ctgatcgtca
      721 acgtcatcct caaggattcc tggggccggc cgcgcccgtc caccatcctg gaatttggcg
      781 gccccaatta tttcgtgccg ccgctgatcg tgaccgacca gtgcgacacc aattgctcgt
      841 tctcgtcggg acacggcgcg ctgggcttct ggccggtggc cttcgcgctg ctggtgccgc
      901 agccgtggcg gccctgggcc atcgcggcgg cgctggtgtt cggcggcatg gtcggactgg
      961 tgcgcatcgc ccagggcggc cacttcctgt ccgacgtcgc gttctccgcc gccatcaccg
     1021 taggggttat ctggtggctc tatcggcgta tagttttgcc gggcgacttg gcttcttcaa
     1081 aaaataatca gcccaaaggt agtgactcgc cgtaatcccc taggcgcggg cctcgtcttc
     1141 gggtaatgat aaccgttgag actgtccttg gtggctgaag cccgggccgg aatgccctgc
     1201 gtgtaccgcg gggtttgtgt atttttgcta cgatgagaac gacacatggc atggaaccga
     1261 gataatcacg gcaatcgcga ccgcggccgc ggccggcgcg acgactttgg cggcgacatg
     1321 ggctacgagc cccgtccgca acgcagcatg ggcggcatgg gcggtggctt cggcggcggc
     1381 ggcgaccgca atgccgtcac ccaggccaac gtcaccgcca ccgtcaagtg gttcaatgcc
     1441 tcgaagggct tcggcttcgt cgctccgtcc gacggcaccc ccgacgcgtt cctgcacatc
     1501 tcggcgctcg agcgcgccgg tctggcgcag atcgccgaag gcgccaccat cgtgtgcgac
     1561 ctgggcgccg gccagcgcgg cccgcaggtc gtgaccgtgc acgaggtcga ccagtcgacc
     1621 gccgctccgc gcgccccgcg catggaccgt ggcggcgatc gcggcccgtc cgagaccgtc
     1681 gaaggcgtgg tcaagttctt ctcggccgag aagggcttcg gcttcgtcgc cgtggacgag
     1741 ggtggcaagg acgtgttcgt tcacgtcaag gcgctcgagc gttcgggcat caagaccctg
     1801 gaaaccggcc agcgcgtgcg tgtcaccacc acgctgggcc agaagggtcc gcaggccgac
     1861 accgtcgccc tggtctgatc gaccggagca tcggcatcct gcccgccggc gaggcgactc
     1921 gccggacggg gagcgagtcg caaaagccag gcaccgaacg gtgcctggct ttttgtttgg
     1981 tccgcgcgat caggaagccc ccccgctcat cggcgatgaa cccgattaca gcccggccag
     2041 ccgccgctcc aattcctcgg catgcgccgc cggcaggtcg ccgcggttga ccgccgcctt
     2101 catcagggtc aggcagcgtc gcatgaaggc ggggcgttcg gtggcgttca aggcgatacg
     2161 cagcgcggcc aaggtgcctt cgtcgccggc ttcggcggtg gtgggccagc cgtcctcgtc
     2221 gacgatcagc tcaagctcgc gggcattggc gccgcgcagg gccgccaggc gcgggtcgtc
     2281 gggctcgctt tgccggcaca gacgggcctc ggcctcggcc aaggcgatca ggcggtgctt
     2341 gaacgggtag tcgaggcaat gcggggagcc ttcggccccc cgcaaccgct ccatcatccg
     2401 cgtccgcccg acagcaggcc gcgcgcgatc acctgcgcct ggatctcggc cgcgccctcg
     2461 aagatgttga ggatgcgggc gtcgcacagc acgcggctga tctggtattc ctcggcatag
     2521 ccgttgccgc catggacctg cagcgcgttg tcggcgttgg cccaggcgac gcgggcggcc
     2581 agcagcttgg ccatgccggc ctcgatgtcg cagcggcggt ccgagtcctt ctcgcgcgcc
     2641 gagaaatagg tgagctggcg ggcgaccatg gtttccaccg ccatccacgc gatcttgcag
     2701 gcgacgcgtg ggaagttgta gatcggcttg ccgaactgga cgcggtcctt ggcgtattgc
     2761 tggccgatct ccatggcgtt ctgggccacg ccgacggcgc gggcggcggt ctggatgcgg
     2821 gccgattcga aggtttccat cagctgcttg aagccctggc cctcgacgcc gcccagcagg
     2881 ttggcggccg gcaccttgaa gccgtcgaag cccagttcgt attccttcat gccgcgatag
     2941 cccagcacct tgatctcgcc gccggtcatg ccctcggccg ggaacggatc ggcctcggtg
     3001 ccgcgcggct tgggcgcgat cagcatggac aggccgcgcc aatccttggt ttccggattg
     3061 gtgcgcacca gcagggtcat cacgtcggtg cggctggcat gggtgatcca ggtcttgttg
     3121 ccggtcacca cgtagctgtc accctccttg accgcgcggg tgcgcaggga accgaggtcc
     3181 gagccggtgt tgggctcggt gaacacggcg gtcggcagca cctcgcccga ggcgatcc
//
LOCUS       DATIKR010000311         2699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_234487, whole genome shotgun sequence.
ACCESSION   DATIKR010000311 DATIKR010000000
VERSION     DATIKR010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234487"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1001
                     /locus_tag="VLL76_04935"
     CDS             <1..1001
                     /locus_tag="VLL76_04935"
                     /inference="COORDINATES: protein motif:HMM:NF037144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cadherin-like domain-containing protein"
                     /protein_id="HSV28875.1"
                     /translation="TLPPGKTVDAVMVAPAAGRYALYDRMLELTNGGKSPGGLLSYVQ
                     ATAGTVAAADDAFAATEDTQLVVPATGVLANDTGTNLIASLVTPPGGGTLALAPDGGF
                     TFTPAANFSGKAVFTYRASDGTAQSNVASATITVAPVNDAPMAMADQYHAVAGQELAV
                     PAPGLLQNDHDVDGNTLTAVVGTGPANGTLALAADGSFKYTANAGFGGSDSFTYTVSD
                     GSLSSPPATVTITVAQPVNQAPIAADDKARTTTNQAVTITVLANDRDPDGSLNPASVQ
                     IVAPPNQGGKAVANANGTVTFTPKRRFRGTDVFTYRVADQAGKYSNTAKVSVDVTR"
     gene            1011..1403
                     /locus_tag="VLL76_04940"
     CDS             1011..1403
                     /locus_tag="VLL76_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28876.1"
                     /translation="MKPFLMLALLLACALPARAEQAVEGIEIESLRLTAAGNMVDLRL
                     KVTDAEKAARVLDGANQPMLKVKGAGKTLVVPAPAKIGPLKATGGKLEAGRTYFVLFG
                     NPKRLLTGGQQVDLRFGPYLIPDLVVEN"
     gene            1406..>2699
                     /locus_tag="VLL76_04945"
     CDS             1406..>2699
                     /locus_tag="VLL76_04945"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSV28877.1"
                     /translation="MRWPIVAVAAVAATPGLAAAAELDAPLRQALSQVSPDQEVAVIV
                     IHRNTGLLDRFPGGAQLRKELRLRADRDLPELEQRLRGRGATLFRRLWTINGVATRLP
                     ASAIQELANDPSVAEIRLDATVQEPQATYESGAVAPEWNIAMVRAPDLWAQGHFGKGV
                     TVAVMDTGIDRFHPELAGKWRGGGNSWFDPSGQHSQPSDNSGHGTHVASIVLGGRDGA
                     PAIGMAPQARWIGAKIFNDSGQGSLSGIHASFQWLLDPDDDPATDDAPQVVVASWNLN
                     GTTNVCATEFAQDIALLRQAGIAMVFSAGNTGPGPNTSVSPANNAGAFPVGAVAQGAV
                     VSPESGRGVSACGGGLYPAVAAPGVSVRVADLTYDGVFPDSYAVVSGTSFAAPHVAGA
                     MALLTGARGNATAETLEAALTKAATDTSTSGADNDSGHG"
BASE COUNT          431 a          967 c          936 g          365 t
ORIGIN      
        1 tcaccctgcc gcccggcaag acggtggacg cggtgatggt ggcgccggcg gcggggcgct
       61 atgccctgta tgaccgcatg ctggagctga ccaacggcgg caagtcgccc ggcggcctgt
      121 tgtcctatgt gcaggcgacg gccggcacgg tcgccgccgc cgatgatgcc tttgccgcca
      181 ccgaggacac ccagttggta gtgccggcga ccggcgtgct ggccaacgat accggcacca
      241 acctgatcgc gtcgctggtg acgccgcccg gcggcggcac cctggccttg gcgcccgatg
      301 gcggcttcac tttcacccca gcggccaatt tctcgggcaa ggcggtgttc acctaccggg
      361 ccagcgacgg caccgcccag agcaacgtcg ccagcgccac catcacggtg gcgccggtca
      421 acgacgcccc catggcgatg gccgaccagt accatgccgt ggccggccag gaactggcgg
      481 tgccggcgcc gggcctgctg cagaacgacc acgacgtcga tggcaacacc ctgaccgccg
      541 tcgtgggcac ggggccggcc aacggcacct tggccttggc ggcggacggc tcgttcaaat
      601 acaccgccaa tgccgggttc ggcgggtcgg acagcttcac ctacaccgtg tcggacggca
      661 gcctgtccag cccgcccgcg accgtcacca tcacggtggc ccaaccggtc aaccaagccc
      721 ccatcgccgc cgacgacaag gcccgcacca ccaccaacca ggcggtgacg atcaccgtgc
      781 tggccaacga ccgcgacccg gacggcagcc tcaatcccgc cagcgtccag atcgtcgcgc
      841 ccccgaacca gggcggcaag gcggtggcca acgccaacgg cacggtgacc ttcaccccca
      901 agcgccgctt ccggggcacc gacgtcttca cctaccgggt ggcggaccag gctggcaagt
      961 attccaacac cgccaaggtc agcgtcgacg tgacgcgata ggaggacgcg atgaagcctt
     1021 tcctgatgct ggccctgctg ctcgcctgcg ccctgccggc gcgggccgag caggcggtcg
     1081 aggggatcga gatcgagagc ctgcgcctga cggcggcggg caacatggtg gacctgcgcc
     1141 tcaaggtcac cgacgcggaa aaggccgccc gagtgctgga cggcgccaac cagccgatgc
     1201 tcaaggtcaa gggcgccggc aagactttgg tggtgccggc gccggccaag atcgggccgc
     1261 tgaaggccac cggcggcaag ctggaggccg ggcggaccta cttcgtgctg ttcggcaatc
     1321 ccaagcgcct gttgacgggc gggcagcagg tcgatcttcg cttcggcccg tacctgatcc
     1381 ccgacctggt ggtggagaac tgaccatgag atggccgatt gtggcggtgg cggcggtcgc
     1441 ggcgacgccc ggcctggccg cagccgctga gctggacgcg ccgttgcgcc aggcgttgag
     1501 ccaggtttcg cccgaccagg aggtggcggt gatcgtgatt caccgcaaca ccggtctgct
     1561 cgaccgcttc ccggggggcg cgcagttgcg caaggaattg cgcctgcgcg ccgatcgcga
     1621 cctgcccgag ctggaacagc ggttgcgggg caggggggcg accctgttcc gccgcctgtg
     1681 gaccatcaac ggcgtggcga ccagattgcc cgcctcggcc atccaggaac tggccaacga
     1741 tccctcggtc gccgagattc gcctcgacgc caccgtccag gagccgcagg cgacctatga
     1801 aagtggcgcg gtggcgccgg aatggaacat cgccatggtg cgggcgcccg atctgtgggc
     1861 ccagggccat ttcggcaagg gcgtcacggt ggcggtgatg gacaccggaa tcgaccgctt
     1921 ccaccccgaa ctggccggca agtggcgcgg cggcggcaac agttggttcg accccagcgg
     1981 ccagcattcc cagccgtcgg acaattccgg ccacggcacc cacgtcgcct cgatcgtcct
     2041 gggcggccgc gatggcgccc ccgccatcgg catggcgccg caggcgcgct ggatcggcgc
     2101 caagatcttc aacgattccg gtcagggcag cctcagcggc atccatgcct cgttccaatg
     2161 gctgctggac cccgacgacg accctgccac cgacgacgcg ccgcaggtgg tggtggcgtc
     2221 gtggaacctg aacggcacca ccaacgtctg cgccaccgag ttcgcccagg acatcgccct
     2281 gctgcgccag gccggcatcg ccatggtgtt ctcggccggc aacaccgggc cgggacccaa
     2341 taccagcgtc agcccggcca acaatgccgg cgccttcccg gtcggcgcgg tggcccaggg
     2401 cgcggtggtg tctccggaaa gcggccgggg cgtgtcggcc tgcggcggcg gcctgtaccc
     2461 agcggtggcg gcaccggggg tgtcggtgcg ggttgccgac ctcacctatg acggcgtgtt
     2521 cccggactcc tacgcggtgg tgtcgggcac gtccttcgcc gcgccccatg tcgccggcgc
     2581 catggcgttg ctgacgggag cgaggggcaa cgccacggcg gaaacgctgg aggcggcgct
     2641 gaccaaggcc gcgacggata ccagcaccag cggcgccgac aacgacagcg gccacggcg
//
LOCUS       DATIKR010000312         1867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_113395, whole genome shotgun sequence.
ACCESSION   DATIKR010000312 DATIKR010000000
VERSION     DATIKR010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113395"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VLL76_04950"
     CDS             complement(<1..701)
                     /locus_tag="VLL76_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28878.1"
                     /translation="MTRRDRLALWVLPVLFALTLVVMRQAGMPFWQHFNLDPSYYYLL
                     NGLRIVEGLAPTDVSHPGTPIQLLIAVVMRAMHPGSSAEQIVDLVLASPEHYLVATTN
                     VVYVLAAVSLWAMGRAILTTTGLLWPALLAQSAPFMSRVIPKFGLHPKPEIFMVIAVA
                     LLAVVALQMVRSGRATDRQAALAGVVMGLGIACKVHFAVLGVVPLLLLDRRRFAIYAA
                     VTIAAFLVFVAPAIPS"
     gene            complement(698..1387)
                     /locus_tag="VLL76_04955"
     CDS             complement(698..1387)
                     /locus_tag="VLL76_04955"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV28879.1"
                     /translation="MDSSAPGFYGSYATYKGYETPQVGPKQIRRFDDEVWNPAGFRPE
                     HNVLEIGCGTGAFLAYLAAKGCGRFMGIDHDPNLAQVVPATVRDRFSCRDVWDVLADP
                     ACGPFDRVVLLDVLEHFSAEDAQRLLEGLRPRLAADARIILKVPNASCPWGLQYQFGD
                     LTHRTAFTPLSIRQLADSAGFQVDKLYAQRQGSRRRMITDALVHRFLSWALLTPPQYW
                     SANLYAVLAPK"
     gene            complement(1479..1679)
                     /locus_tag="VLL76_04960"
     CDS             complement(1479..1679)
                     /locus_tag="VLL76_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28880.1"
                     /translation="MGSSSLRFCFTVDGHAAQGAGDMTVTYVGRVNRKLAEADARRRF
                     EEWRSTGNPLARKFARDQVVVA"
     gene            complement(1682..>1867)
                     /locus_tag="VLL76_04965"
     CDS             complement(1682..>1867)
                     /locus_tag="VLL76_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HSV28881.1"
                     /translation="TAEAGTIVVALVDDQEVTLKRLRRKGGSIALEPANQKYETRIFP
                     PDRVKVQGKLVGLLRMY"
BASE COUNT          336 a          581 c          694 g          256 t
ORIGIN      
        1 gacgggatgg cgggcgcgac gaagaccagg aaggcggcga tcgtgacggc ggcgtagatg
       61 gcgaagcggc ggcggtccag cagcagcagc ggtaccacgc cgagcacggc gaaatggacc
      121 ttgcaggcga tgcccaatcc catcaccacg ccggccaagg cggcctggcg gtcggtggcg
      181 cggcccgagc gcaccatctg cagagccacc acggccaaca gcgccaccgc gatgaccatg
      241 aatatctcgg gcttggggtg caggccgaat ttggggatga cccgcgacat gaacggcgcc
      301 gactgggcca gcaaggcggg ccacagcagg ccggtggtgg taaggatggc gcggcccatg
      361 gcccacagcg acacggccgc cagcacgtag acgacgttgg tggtggcgac caggtaatgt
      421 tcgggcgacg ccagcaccag atcgacgatc tgctcggccg agctgccggg atgcatcgcc
      481 cgcatcacca ccgcgatcag caactggatc ggcgtgccgg gatggctgac gtcggtgggg
      541 gcaaggccct cgacgatgcg caggccgttg agcaggtagt aataggacgg gtcgaggttg
      601 aaatgctgcc agaacggcat gccggcctgg cgcatcacca ccagggtcag cgcgaacagg
      661 acgggcaaca cccacaacgc cagccggtcg cgccgggtca tttgggggcc agcacggcgt
      721 aaaggttggc gctccagtat tgcggcggcg tcagcagcgc ccacgacagg aagcggtgga
      781 ccagggcgtc ggtgatcatg cggcggcgcg agccctggcg ctgggcatag agcttgtcca
      841 cctggaagcc ggcggaatcg gccaattggc ggatggacag cggggtgaac gcggtgcggt
      901 gggtgaggtc gccgaactgg tattgcaggc cccacgggca ggacgcgttg ggcaccttga
      961 ggatgatgcg ggcgtcggcg gcgaggcggg ggcgcagccc ttccagcaga cgttgggcgt
     1021 cctcggccga gaaatgctcg agaacgtcga gcaacaccac ccggtcgaac ggcccgcagg
     1081 cggggtcggc cagcacgtcc cacacgtcgc ggcaggagaa gcggtcgcgc acggtggccg
     1141 gaaccacctg ggccaggttg gggtcatggt cgatccccat gaagcggccg cagcccttgg
     1201 cggcgagata ggccaggaag gcgccggtgc cgcagccgat ctccagcacg ttgtgctcgg
     1261 gccggaaccc ggccgggttc cacacctcat cgtcgaaacg acgaatctgc ttggggccga
     1321 cctggggcgt ttcatagccc ttgtaggtgg cgtaggaacc gtagaaaccc ggcgcactgc
     1381 tgtccaaagg tccatctccc ctgaccgatg gcaagggttt accggagcgc gcgcaagcgg
     1441 gcaagtcatg accctcgccc gcttggggcg aggggggctt aggcgaccac gacctggtcg
     1501 cgggcgaact tgcgggccag cggattgccg gtcgagcgcc attcctcgaa gcggcggcgg
     1561 gcgtcggcct cggccagctt gcggttgacg cggccgacat aggttacggt catgtcgccg
     1621 gcgccctggg cggcatggcc gtcgacggtg aagcagaagc ggagcgacga cgagcccatg
     1681 gtcagtacat cctcagcagg ccgaccagct tgccctgaac cttgacgcgg tcgggcggaa
     1741 agatgcgggt ttcgtacttc tggttggccg gctccagcgc gatcgagccg cccttgcggc
     1801 gcaggcgctt caacgtgacc tcctggtcgt ccaccagggc gaccacgatg gtgccggcct
     1861 cggcggt
//
LOCUS       DATIKR010000313         1662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_185798, whole genome shotgun sequence.
ACCESSION   DATIKR010000313 DATIKR010000000
VERSION     DATIKR010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185798"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..>1662)
                     /gene="ligA"
                     /locus_tag="VLL76_04970"
     CDS             complement(220..>1662)
                     /gene="ligA"
                     /locus_tag="VLL76_04970"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HSV28882.1"
                     /translation="VTATRPLCLFAYAMGEVSEPIADSHWHFLQRLRDWGFPVNDDIT
                     LCRSTDEVLAAYARIGDRRAALPYDIDGVVYKVDRFDWQARLGMRENNPRWAVAHKFP
                     AEQAVTHLKAIHISVGRTGVLTPWAELEPVNVGGVVVGRATLHNEDDIRRKDIREGDT
                     VIVQRAGDVIPQVVGPVPGKERGAEDFSMVAKLTPPGADHPQCPACGSHAVRVEGEAG
                     WRCTGGLVCPAQATERLIHFASRTAFDIEGLGEKNVQFLWEKGFVRNPADIFRLEERN
                     RAAIQRLENFEGWGKRSVEKLFAAIETRRTIPLERLIYSLGIRQVGEATAKRLARHYA
                     SFAHWREAMVEAVARENPAYHELVSIEDIGPSVAGDILAFFAEDHNLAALDDLAAQLT
                     TIEEAARPANADSPVAGKAVVFTGTLTTMTRQEAKARAESLGAKVVGSVSKKTDYVVA
                     GAEAGSKLAEAQKHGVTVLTEQEWLDLIGA"
BASE COUNT          239 a          573 c          586 g          264 t
ORIGIN      
        1 gggcgacagg atgttggcca gcgcccccag cagccgcgcc agcccgcccg gctgcgacgg
       61 atggtcctcg gccggctgct ccgcgggcac caggtcgcgg cgagccggca ggttcagcgc
      121 gggacgctgc agcggcttcg agaacttggc gcgggggtct tccatgtcac tcatgagagt
      181 tcatcttgta agccaccccg ggccgggggg caacaaacct catgccccga tcaggtccag
      241 ccattcctgc tcggtcagca ccgtgacgcc gtgcttctgc gcctcggcca gcttcgagcc
      301 ggcctcggcg cccgccacca cgtaatcggt cttcttcgac acgctgccga ccaccttggc
      361 gcccagcgac tcggcccgcg ccttggcctc ctggcgggtc atggtggtca gggtgccggt
      421 gaacaccacc gccttgccgg ccaccgggga atcggcgttg gcggggcggg cggcttcctc
      481 gatcgtggtc aactgcgccg ccagatcgtc gagcgccgca aggttgtggt cctcggcgaa
      541 gaaggccagg atgtcgccgg ccaccgaagg gccaatgtcc tcgatggaca ccagttcgtg
      601 ataggccggg ttctcgcgcg ccaccgcctc gaccatggcc tcgcgccaat gggcgaagga
      661 cgcgtagtgg cgcgccagcc gcttggcggt ggcctcgccc acctggcgga tgcccagcga
      721 atagatcagc cgttccagcg ggatggtgcg gcgggtctcg atggcggcga acagcttttc
      781 gacgctgcgc ttgccccagc cctcgaaatt ctccagccgc tggatggcgg cacggttgcg
      841 ttcctccagc cggaagatgt cggcgggatt gcgcacgaag cccttttccc acaggaactg
      901 gacgttcttc tcgcccaggc cctcgatgtc gaaggcggtg cggctggcga aatggatcag
      961 ccgttcggtc gcctgggccg ggcacaccaa accgccggtg cagcgccagc cggcctcgcc
     1021 ctccacccgc acggcatggc tgccgcaggc cgggcattgc gggtggtcgg cgcccggcgg
     1081 cgtcagcttg gcgaccatcg agaaatcctc ggcgccgcgc tccttgcccg gcaccggccc
     1141 gaccacctgg ggaatgacgt cgccggcccg ctggacgatc acggtgtcgc cctcgcggat
     1201 gtccttgcgg cggatgtcgt cctcgttgtg cagggtggcg cggccgacca ccacgccgcc
     1261 aacattgacc ggctccagct cggcccaggg cgtcagcacg ccggtgcggc cgaccgagat
     1321 gtggatggcc ttgaggtggg tgacggcctg ctcggcgggg aatttgtggg cgacggccca
     1381 gcgcgggttg ttctcgcgca tgcccaggcg cgcctgccag tcgaagcggt cgaccttgta
     1441 tacaaccccg tcgatgtcgt agggcagggc ggcgcggcgg tcgccgatgc gggcataggc
     1501 ggccagcacc tcgtcggtcg agcggcacaa ggtgatgtcg tcgttgaccg gaaagcccca
     1561 gtcgcgcagg cgctgcagga aatgccagtg gctgtcggcg atgggctcgg acacctcgcc
     1621 catggcatag gcgaacaggc acagcggccg ggtggcggtg ac
//
LOCUS       DATIKR010000314         4725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_150245, whole genome shotgun sequence.
ACCESSION   DATIKR010000314 DATIKR010000000
VERSION     DATIKR010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150245"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VLL76_04975"
     CDS             complement(<1..346)
                     /locus_tag="VLL76_04975"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HSV28883.1"
                     /translation="MRKASIERKTTETSISVAVNLDGSGRYTVATGIGFLDHMLEQLS
                     RHSLIDLDVTAKGDLHIDFHHTTEDSGISVGQAVAQALGDRKGITRYGSALVPMDETL
                     VRVALDLSNRPYL"
     gene            491..1036
                     /gene="hslV"
                     /locus_tag="VLL76_04980"
     CDS             491..1036
                     /gene="hslV"
                     /locus_tag="VLL76_04980"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HSV28884.1"
                     /translation="MSDPIPSWHGTTILSVRKNGRVVIAGDGQVSLGQTVIKGNAKKV
                     RRVGGGTILVGFAGATADAFTLLERLEGKLEKHPGQLTRACVELAKDWRTDRYLRRLE
                     AMMAVADRDVSLVLTGQGDVLEPEDGVIAIGSGGNYALAAARALIDVDGLEAEDIARR
                     AMKIAADICVYTNQNIIVEAL"
     gene            1033..2355
                     /gene="hslU"
                     /locus_tag="VLL76_04985"
     CDS             1033..2355
                     /gene="hslU"
                     /locus_tag="VLL76_04985"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HSV28885.1"
                     /translation="MTAFSPREIVSELDRFIVGQNDAKRAVAIALRNRWRRQQLSEGL
                     KEEVLPKNILMIGPTGVGKTEIARRLARLAQAPFLKVEATKFTEVGYVGRDVEQIVRD
                     LVEIAIGMTRERLKRQVTAKAEIEAEERLLDALVGETSSADTRQKFRKMLREGSLDDK
                     EVEIHVVDTGSTAMPTFDIPGMPGASMGMVNLSDMLGKAFGGARTKPRRMNVKDAQKV
                     LLDEESDKLLDQETVVKEAIWSVENNGIVFIDEIDKICARSSEHHVGGDVSREGVQRD
                     LLPLIEGTTVATKHGNVKTDHVLFIASGAFHLAKPSDLLPELQGRLPIRVELKALTRD
                     DFKRILTEPEASLIKQYVALLATEEVELAFGDDAIDAIADLAAEINRSVENIGARRLQ
                     TVMERLLEDISFTAPDQPPGTRIAITAEMVEQRVGELAKKADLAKFIL"
     gene            2388..2963
                     /locus_tag="VLL76_04990"
     CDS             2388..2963
                     /locus_tag="VLL76_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV28886.1"
                     /translation="MSEPWRLLLRGISGDTRELAAGDALFGAGDPARAIFAVEKGEVR
                     LERAGVTVHTAQAGSLFAETALFADSYDCDAVAVRESVVRSYPRMAVSLHLRAHRDLS
                     LAFTAYLARQLQETRGRVEVLRLKNAGERVLAFLATQPAEDGIVRLDQPLTAVAGEIG
                     LTHEALYRTLTRLARNGRITRLGRREFRLTP"
     gene            complement(2953..3303)
                     /locus_tag="VLL76_04995"
     CDS             complement(2953..3303)
                     /locus_tag="VLL76_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV28887.1"
                     /translation="MTPFGARVRALRDGRGIPLKRMAADLNVSAAYLSALEHGKRGRP
                     APGLVMQVAGYFGLIWDEAEELKLLAELSHPKVTIDTAGLDPARTELANRLARSIKDL
                     PDEAVAAMLATVRG"
     gene            complement(3416..3976)
                     /locus_tag="VLL76_05000"
     CDS             complement(3416..3976)
                     /locus_tag="VLL76_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HSV28888.1"
                     /translation="MRDGLPHRPRRRAVTPDEARIWKSVVKDVAPLAGRAIDEPEAEA
                     VAAAPPPELPPIRMPEPSPPPRPRAPLPELGHGAVIGLDKRTAERMKGGDMAIDGRID
                     LHGMTQDAAHGALLSFVARSYDSGRRCVLVITGKGREGSGVLRAQVPRWLNQSPLRER
                     ILSFSYARPQHGGEGALYVLIKRRRV"
     gene            complement(3969..4628)
                     /locus_tag="VLL76_05005"
     CDS             complement(3969..4628)
                     /locus_tag="VLL76_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LUD domain-containing protein"
                     /protein_id="HSV28889.1"
                     /translation="MTARDAILGNIRRALHRDVLPACEQANLNRRMADSRPNVVPARG
                     RGDHGELVERFRAMAVETQATLARVADEAAVPAAIAAFLADAGIAPAVVASPALSGLD
                     WGGAGLQARLGAALPGDLVSVTPTFRAVAETGSLVTLSAPDRPSSLHFLPDVHIALVK
                     ASEVVGAYEDAWAALRQAGALPRTVNLITGPSRTADIEQSLLLGAHGPRRLHVILIDH
                     A"
BASE COUNT          747 a         1638 c         1669 g          671 t
ORIGIN      
        1 ccagataggg ccggttggac aggtcgagag cgacccgcac cagggtctcg tccatcggca
       61 ccagggccga gccgtagcgg gtgatgccct tgcggtcgcc cagcgcctgc gccaccgcct
      121 ggccgacgct gatgccggaa tcctcggtgg tgtggtggaa atcgatgtgg aggtcgccct
      181 tggccgtgac gtccaggtcg atcagcgaat gccgcgacaa ttgctccagc atgtggtcga
      241 ggaagccgat gccggtggcg acggtgtaac gcccgctgcc gtccaggttg acggcgacgc
      301 tgatgctggt ttccgtggtc ttgcgctcga tgctggcctt gcgcatgggg ccctcctatg
      361 gcaggcccat gatgtaacag gaagaacgcc gattctccag cccttcccaa tacgccggca
      421 cgccttatct atgcggggca gggattgcgt gccatcatcc ggcccaatca atcgccccgt
      481 ctggagaccc atgtccgatc ccatccccag ctggcacggc accaccatcc tgtccgtgcg
      541 caagaacggc cgcgtcgtca tcgccggcga cggccaggtc agccttggcc agaccgtcat
      601 caagggcaac gccaagaagg tgcgccgcgt cggcggcggc accatcctgg tcggcttcgc
      661 cggcgccacc gccgacgcct tcaccctgct ggagcgcctg gaaggcaagc tggaaaagca
      721 tcccggccag ttgacccgcg cctgcgtcga gctggccaag gactggcgca ccgaccgcta
      781 tctgcgccgg ctggaagcca tgatggcggt ggccgaccgc gacgtgtcgc tggtgctgac
      841 cggccagggc gacgtgctgg aacccgagga cggcgtcatc gccatcggct cgggcggcaa
      901 ttacgccctg gccgccgccc gcgccctgat cgacgtcgat ggcctggagg ccgaggacat
      961 cgcccggcgc gccatgaaga tcgccgccga catctgcgtc tacaccaacc agaacatcat
     1021 cgtggaagcc ctatgaccgc gttcagcccc cgcgagatcg tctcggaact cgaccgcttc
     1081 atcgtcggcc agaacgacgc caagcgcgcc gtcgccatcg ccctgcgcaa ccgctggcgc
     1141 cggcagcaat tgtccgaagg gctgaaggaa gaggtcctgc ccaagaacat cctgatgatc
     1201 ggccccaccg gcgtcggcaa gaccgagatc gcgcggcggc tggcgcggct ggcgcaggcg
     1261 ccgttcctca aggtcgaggc caccaagttc accgaggtcg gctatgtcgg ccgcgacgtc
     1321 gagcagatcg tgcgcgacct ggtcgagatc gccatcggca tgacccgcga gcgcctcaag
     1381 cgccaggtca ccgccaaggc cgagatcgag gccgaggagc ggctgctgga cgcgctggtg
     1441 ggcgagacgt cgtcggccga cacccgccag aaattccgca agatgctgcg cgagggcagc
     1501 ctggacgaca aggaggtgga gatccacgtg gtcgacaccg gctccaccgc catgccgacc
     1561 ttcgacatcc ccggcatgcc gggtgccagc atgggcatgg tcaacctgtc cgacatgctg
     1621 ggcaaggcgt tcggcggcgc ccgcaccaag ccgcggcgca tgaacgtcaa ggacgcccag
     1681 aaggtgctgc tggacgagga atccgacaag cttctcgacc aggagacggt ggtcaaggag
     1741 gccatctggt cggtcgagaa caacggcatc gtgttcatcg acgagatcga caagatctgc
     1801 gcccgctcgt ccgagcacca cgttggcggc gacgtcagcc gcgagggcgt gcagcgcgac
     1861 ctgctgccgc tgatcgaggg caccacggtc gccaccaagc acggcaacgt caagaccgac
     1921 cacgtcttgt tcatcgcctc gggcgccttc cacctggcca agcccagcga cctgctgccc
     1981 gagctgcagg gccgcctgcc catccgggtc gagctcaagg cgctgacccg cgacgacttc
     2041 aagcgcatcc tgaccgagcc ggaagccagc ctgatcaagc aatacgtcgc cctgctggcg
     2101 accgaggagg tcgagctggc gttcggcgac gacgccatcg acgccatcgc cgatctggcc
     2161 gccgagatca accgcagcgt cgagaacatc ggcgcccgcc ggctgcaaac ggtgatggag
     2221 cgactgctgg aggacatcag cttcaccgcc cccgaccagc ccccaggcac ccgcatcgcc
     2281 atcaccgccg agatggtcga gcagcgcgtc ggcgaactgg cgaagaaggc cgatctggcg
     2341 aagttcatcc tgtaggtcca tgatcgcgat catacccagg ggggatcatg agcgagccat
     2401 ggcgcctgct gttgcggggc atatcgggcg acacccgcga gctggcggcg ggtgacgcgc
     2461 tgtttggcgc cggcgatccg gcgcgggcga tcttcgcggt cgagaaaggg gaggtgcggc
     2521 tggaacgtgc cggcgtcacc gtgcacacgg cacaggcggg gtcgctgttc gccgagacgg
     2581 cgctgttcgc cgattcatac gattgcgacg cggtggcggt ccgggagtcc gtcgtgcggt
     2641 cctatccgcg catggcggtc agcctgcacc tgcgcgccca ccgcgacctg tcgctcgcct
     2701 tcaccgccta tcttgcccgc cagttgcagg aaacgcgcgg ccgggtcgag gtgttgcggc
     2761 tgaagaatgc gggcgaacgg gtgctggcct tcctggcgac gcagccggcc gaggacggga
     2821 tcgtccgcct ggaccaaccg ctcaccgccg tggccggcga gatcggcctg acccacgagg
     2881 cgctttaccg cacgctgacg cggctggcac ggaacggccg catcacccgg ctgggccgcc
     2941 gcgagtttcg ccttaccccc tgaccgtcgc cagcatcgcc gccaccgcct cgtccggcag
     3001 gtccttgatg gaccgcgcca gccggttggc cagttcggtg cgggcggggt cgaggccggc
     3061 ggtgtcgatg gtgaccttgg ggtgggacag ctcggccaaa agcttcagct cctcggcctc
     3121 gtcccagatc aggccgaaat agccggccac ctgcatcacc agcccgggcg ccggccggcc
     3181 ccgcttgccg tgttccagcg ccgacagata ggcggccgag acgttgaggt cggcggccat
     3241 gcgcttgagc gggatgccgc gcccgtcccg cagcgcgcgc acgcgggcgc cgaacggagt
     3301 catgccggcg agtctccgtc acccccgcga aggcgggggt ccatgcgtcc gccggcccgc
     3361 tggcgccgaa actggattcc cgccttcgcg ggaatgacgg caagaggggc cggagtcaca
     3421 cccgcctccg cttgatcagc acgtagagcg ctccttcgcc gccatgctgc gggcgggcgt
     3481 aggagaagct gaggatgcgt tcgcgcagcg gcgactggtt gagccagcgc ggcacctgcg
     3541 cccgcagcac ccccgagccc tcgcggccct tgccggtgat gaccagcacg cagcggcgcc
     3601 cggaatcgta ggagcgggcg acgaaggaca gcagcgcgcc gtgggcggcg tcctgggtca
     3661 tgccgtgcag gtcgatgcgg ccgtcgatgg ccatgtcgcc gcccttcatg cgttcggcgg
     3721 tgcgcttgtc gagcccgatc acggcgccat ggcccagttc gggcagcggc gcgcgcgggc
     3781 gcggcggcgg cgaaggttcg ggcatgcgga tgggcggaag ctcgggcggc ggcgcggcgg
     3841 ccaccgcctc ggcctcgggt tcgtcgatgg cgcggccggc cagcggcgcc acgtccttga
     3901 ccaccgattt ccagatgcgc gcttcgtcgg gcgtcaccgc ccggcggcgc gggcggtggg
     3961 gcagcccgtc acgcatggtc gatcagaatg acatgcaggc gccggggacc gtgggcgccc
     4021 agcagcaggc tttgttcgat gtcggcggtg cgcgacggcc cggtgatcag gttgaccgtg
     4081 cgcggcagcg cacctgcttg gcgcaaagcc gcccaggcgt cctcgtaagc gcccaccacc
     4141 tcggacgcct tgaccagggc gatgtggacg tcgggcagga aatgcagact actgggccgg
     4201 tcgggcgccg acagggtgac caggctgccg gtctcggcga cggcgcggaa ggtgggcgtg
     4261 accgacacca aatcgcccgg caaggcggcg cccaggcggg cctgcaatcc ggccccgccc
     4321 caatccagcc ccgacaaggc gggcgacgcc accaccgccg gcgcgatgcc ggcgtcggcc
     4381 aggaaggcgg cgatggcggc gggcaccgcc gcttcgtcgg cgacccgcgc cagcgtcgcc
     4441 tgggtctcga cggccatggc gcggaaacgc tcgaccagtt cgccatggtc gccgcgcccg
     4501 cgcgccggca ccacgttggg ccgggaatcg gccatgcggc ggttgaggtt cgcctgttcg
     4561 caggcgggca gcacatcgcg atggagcgcg cggcggatgt tgccgaggat ggcgtcgcgg
     4621 gcggtcatgg cggcaggatc tcctggaccg gcccttgggc gatctcgggt tcaggctcgg
     4681 gcgccggggc tggttgcggc gcggcggcgg ccggcacttc gtcgg
//
LOCUS       DATIKR010000315         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_113415, whole genome shotgun sequence.
ACCESSION   DATIKR010000315 DATIKR010000000
VERSION     DATIKR010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113415"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VLL76_05010"
     CDS             complement(<1..524)
                     /locus_tag="VLL76_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007678677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HSV28890.1"
                     /translation="MTSKPRVGLMATCLVDLFRPNVGFAAAKLLEDAGCDVEVPPGQT
                     CCGQPAYNSGDREDARALALNTMRVFAGFDYVVLPSGSCAAMIRHHYPLLFADDPDLG
                     RQARALAERTHELVSFLTDVMGVKGVAARLEGSATYHDSCSGLREMKIKAQPRQLLAT
                     VSGLELKEMTAPEE"
     gene            complement(594..>1649)
                     /locus_tag="VLL76_05015"
     CDS             complement(594..>1649)
                     /locus_tag="VLL76_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MltA domain-containing protein"
                     /protein_id="HSV28891.1"
                     /translation="QPASFADLPGWQGDNAGAVLPALLKSCDRLSKLPPDRSVGADGM
                     GGTVADWHAPCSAARRLSAGEHDYVRLFFESWFTPHLVSNRGQAEGLFTGYFEPELPG
                     SRSRSGRFSVPLLGKPRDLVTKEVNGEQVVGRMVGGRFEPYPTRAEIEAGALGDRAKP
                     VVWVDDPVDAHILHIQGSGRIRLEDGSVLRLAVAGHNGHKFVGIGRVMKERGLLTDIS
                     MPAIRAWLKANPKQAVALMAENPRYIFYRLLNGEGPIGSEGVPLTPERSLAVDTRYIP
                     LGMPLWLDSVDPSGAPLRRLMVAQDTGSAIKGVVRGDFFWGAGEPAFEKAGRMKSPGR
                     YWVLLPKQRSPRIASAE"
BASE COUNT          261 a          566 c          581 g          241 t
ORIGIN      
        1 cattcctcgg gcgccgtcat ctccttcaac tccagcccgg acacggtggc gagcaactgg
       61 cgcggctgcg ccttgatctt catctcgcgc aggccggaac aggaatcgtg ataggtggcg
      121 ctgccctcca gccgcgccgc cacgcccttg acccccatga cgtcggtcag gaacgacacc
      181 agttcatggg tgcgctcggc cagggcgcgg gcctggcggc cgagatcggg atcgtcggcg
      241 aacagcaaag ggtaatgatg gcggatcatg gcggcgcacg accccgacgg cagcacgacg
      301 taatcgaagc cggcgaacac ccgcatggtg ttgagcgcca gcgcgcgggc gtcctcgcgg
      361 tcgccggaat tgtaggccgg ctggccgcag caggtctggc cgggcggcac ctcgacgtcg
      421 cagccggcgt cttcgagcag tttcgcggcg gcgaaaccga cattggggcg gaacagatcg
      481 acgaggcagg tggccatcag gcccaccctg ggcttggacg tcatgcaggc ttccttcgct
      541 ttttcagaag gatggcggtt cccgcgcctc ggcgcaagtg gtaggaccag ccgctattcc
      601 gccgacgcga tgcgcgggct gcgctgcttc ggcagcagca cccaatagcg gccagggctt
      661 ttcatgcggc cggccttttc gaaggccggt tcgccggcac cccagaagaa gtcgccgcgc
      721 accacgccct tgatggccga gccggtgtcc tgggccacca tcaggcggcg cagcggcgcg
      781 cccgacgggt ccactgagtc cagccacagc ggcatgccca gcgggatata gcgggtgtcc
      841 accgccagcg agcgttccgg ggtgagggga acgccttccg agccgatggg gccctcgccg
      901 ttgagcaggc gatagaagat gtagcgcggg ttctcggcca tcagcgccac cgcctgcttg
      961 ggattggcct tgagccaggc gcggatggcg ggcatcgaga tgtcggtcag caggccgcgc
     1021 tccttcatca cccggccgat gccgacgaat ttgtggccgt tatggccggc caccgccagg
     1081 cgcagcacgc tgccgtcctc gagccggatg cggcccgaac cctggatgtg caggatgtgg
     1141 gcatcgacgg ggtcgtccac ccacaccacc ggcttggcgc ggtcgcccaa ggccccggcc
     1201 tcgatctcgg cgcgggtggg atagggttcg aagcggccgc cgaccatgcg gccgaccacc
     1261 tgttcgccgt tgacttcctt ggtcaccagg tcgcgcggct tgcccaacag cggcaccgaa
     1321 aagcggccgc tgcggctgcg cgagcccggc agctccggct cgaaatagcc ggtgaacagg
     1381 ccctcggcct ggccccggtt gctgaccaga tggggggtga accaggattc gaagaacagg
     1441 cggacgtaat cgtgctcgcc cgccgacagg cggcgcgccg ccgagcaggg ggcgtgccag
     1501 tcggccaccg tgccgcccat gccgtcggcc cccaccgagc ggtcgggcgg cagcttggac
     1561 aggcggtcgc aagatttcag cagggccggc agcaccgcgc cggcattgtc gccctgccag
     1621 cccggcaggt cggcgaacga cgccggctg
//
LOCUS       DATIKR010000316         2382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_161852, whole genome shotgun sequence.
ACCESSION   DATIKR010000316 DATIKR010000000
VERSION     DATIKR010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161852"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VLL76_05020"
     CDS             complement(<1..706)
                     /locus_tag="VLL76_05020"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HSV28892.1"
                     /translation="MTAPTPRPGIMDIKPYVGGESDIKGVSRVIKLSSNEGALGPSPK
                     AMDAFKAMAHDMHRYPDGGATQLRKALAARWGVDADRIVCGAGSDELLGILCRAYAGP
                     GDEVLYSAHGFLMYGIAAKSCGATPVTAPEVDLTASVDNLLKAVTPRTRIVFLANPNN
                     PTGTYLPADEVKRLRAGLRPDILLVIDAAYAEFVSKNDYTPGIELVDAGDNTVMCRTF
                     SKIFALGGLRLGWAYCP"
     gene            complement(754..1596)
                     /gene="pheA"
                     /locus_tag="VLL76_05025"
     CDS             complement(754..1596)
                     /gene="pheA"
                     /locus_tag="VLL76_05025"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HSV28893.1"
                     /translation="MTKDLSSLDAVRAEIDRIDDRLHDLLMERTALVERVAAAKAADA
                     GVPLRPGREAQILRRLTARHAGPFPKAALVRIWREIMGALVGLQGPFSMGVFQPERGA
                     GYIELARNHFGTTCPMVVHVSPGHVVRMVADGQTSVGVVPVPGDNDAEPWWLALASEA
                     ENLPRVVARLPVIPSERPEPLEALIVARRPHDDTGDDRTLIVVETSPDVSRDRLRGLL
                     ATAALEPSAMVATHRRDDSWLHLVEVTGCLQQGDPALATLVGAKDPVRHVSVIGGYPV
                     PLPA"
     gene            1731..>2382
                     /gene="metX"
                     /locus_tag="VLL76_05030"
     CDS             1731..>2382
                     /gene="metX"
                     /locus_tag="VLL76_05030"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004414 - homoserine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HSV28894.1"
                     /translation="MTVQEPPGLSSNRNPLGYTVELGRDRPIRLDCGVDLGPVTVAYQ
                     TYGTLNADKSNAILMCHALTGDHYVADPHPVTGKDGWWNDLVGPGKVFDTDRYFLICS
                     NVLGGCMGTTGPKDVNPATGKPWGLTFPVITIGDMVQVQARLLDHLGIDNLFCVVGGS
                     MGGMQVLEWCATYPQRVFSAIPIATAARHSAQNIAFHEVGRQAVMADPDWAEGAYYG"
BASE COUNT          372 a          788 c          863 g          359 t
ORIGIN      
        1 ccgggcaata ggcccagccc aggcgcaggc cgcccagcgc gaagatcttc gagaaggtgc
       61 ggcacatcac cgtgttgtcg ccggcatcca ccagctcgat gccgggggtg tagtcgttct
      121 tcgacacgaa ctcggcatag gcggcatcga tcaccagcag gatgtcgggc cgcaggccgg
      181 cgcgcaggcg cttgacctcg tcggccggca ggtaggtgcc ggtggggttg ttggggttcg
      241 ccaggaagac gatgcgggtc ctgggcgtca ccgccttcag caggttgtcg acgctggcgg
      301 tcaggtccac ttccggcgcc gtcaccgggg tggcgccgca cgacttggcg gcgatgccgt
      361 acatcaggaa gccgtgggcc gaatacagca cctcgtcgcc ggggccggca taggcgcggc
      421 acaggatgcc cagcaattcg tcggaaccgg cgccgcagac gatgcggtcg gcatcgacgc
      481 cccagcgggc ggccagggcc ttgcgcaact gggtggcgcc gccgtcggga tagcggtgca
      541 tgtcgtgcgc catggccttg aaggcgtcca tggccttggg gctcgggccc agcgcgccct
      601 cgttggacga cagcttgatg acgcgggaca cacccttgat atcggactcg ccgccgacat
      661 agggcttgat gtccatgata ccggggcggg gcgtgggagc ggtcacggcg aattctcctg
      721 ggtggaggtg gtcttctgaa agggaaaggc ggatcaggcc ggcagcggca ccggatagcc
      781 gccgatgacg ctgacgtggc gcaccgggtc cttggcgccg accagcgtcg ccagggcggg
      841 atcgccctgc tgcaggcagc cggtgacctc gaccaggtgg agccaggaat cgtcgcggcg
      901 atgggtggcg accatggcgc taggctccag cgcggcggtg gccagcaatc cgcgcaggcg
      961 gtcgcggctg acgtcgggcg aggtctcgac cacgatcagg gtgcggtcgt cgccggtgtc
     1021 gtcgtgcggc cggcgggcga cgatcagggc ctccagcggc tcgggccgct cggacgggat
     1081 gaccggcagg cgggcgacca cgcggggcag gttctcggcc tcggacgcca gcgccagcca
     1141 ccacggctcg gcgtcgttgt cgccgggcac cggcaccacg cccaccgagg tctggccgtc
     1201 ggcgaccatg cgcaccacgt ggccgggcga gacgtgcacc accatggggc aggtggtgcc
     1261 gaaatggttg cgcgccagtt cgatgtagcc ggcgccgcgc tcgggctgga acacgcccat
     1321 ggagaacggc ccctgcaggc ccaccagggc gcccatgatc tcgcgccaga tgcgcaccag
     1381 cgcggccttc gggaacgggc cggcgtggcg ggcggtcagg cggcgcagga tctgggcctc
     1441 gcggcccggg cgcagcggca cgccggcatc ggcggccttg gcggcggcga cgcgctcgac
     1501 caacgccgtg cgctccatga gcaggtcatg gagtcggtcg tcgatccggt cgatctcggc
     1561 gcggacggcg tcgagggaag aaaggtcctt ggtcatggct ggcattgtgc tcacgtgaag
     1621 ccgcataggt gtagtgcgtg tacacggcga aatcaaagaa aacgttgaca gccaacgcgc
     1681 gcccccatag ctaatcgtgt cctttatcct tggggcgctg tgccaccgcg atgaccgttc
     1741 aagagccgcc cggcctttcc tcgaaccgca acccgctcgg ttataccgtc gagctgggcc
     1801 gcgaccggcc gattcggctg gattgcgggg tcgatctggg gccggtcacg gtggcctacc
     1861 agacctacgg cacgctcaac gccgacaagt ccaacgccat cctgatgtgc catgcgctga
     1921 ccggcgacca ttacgtcgcc gacccgcacc ccgtcaccgg caaggacggc tggtggaacg
     1981 acctggtcgg ccccggcaag gtgttcgaca ccgaccgcta tttcctgatc tgctcgaatg
     2041 tcctgggcgg ctgcatgggc accactgggc cgaaggacgt caaccccgcc accggcaagc
     2101 cgtggggcct gaccttcccg gtcatcacca tcggcgacat ggtgcaggtg caggcgcggc
     2161 tgctggacca cctgggcatc gacaacctgt tctgcgtggt cggcggctcc atgggcggca
     2221 tgcaggtgct ggaatggtgc gccacctatc cccagcgggt gttctcggcc atccccatcg
     2281 ccacggcggc gcgccattcg gcgcagaaca tcgccttcca cgaggtcggg cgccaggccg
     2341 tgatggccga tccggactgg gctgaaggcg cctactacgg ca
//
LOCUS       DATIKR010000317         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_101492, whole genome shotgun sequence.
ACCESSION   DATIKR010000317 DATIKR010000000
VERSION     DATIKR010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101492"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VLL76_05035"
     CDS             <1..416
                     /locus_tag="VLL76_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSV28895.1"
                     /translation="LANVALVLNLVLLLALLSVLGATLTMPGIAGIVLTMGMAVDANV
                     LIYERIREELRNGRSILSATQAGFERAFGTILDANLTTLAAAGLLFFFGSGPIKGFAV
                     TLTLGLMTSMFTAIMVTRLMVGTWIRVRRPKTMPL"
     gene            428..1375
                     /gene="secF"
                     /locus_tag="VLL76_05040"
     CDS             428..1375
                     /gene="secF"
                     /locus_tag="VLL76_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HSV28896.1"
                     /translation="MSSFYARLIAKTPKFDFVGKRIPAFILTAVLILGSIGSIAVKGF
                     NFGIDFAGGILIEVQAQQDKADLGAMRRSLEGLNLGEVSLQEFGASGRDVMVRIQKQE
                     GDERAQMAALDKVKQALGTGYDYRRVEIVGPKVGEELKRDGVLAVALAVLAIAAYVWF
                     RFEWQFGVGALMATFHDVILTFGLFSVTGLEFNLTSVAAILTIAGYSINDTVVIFDRV
                     RENLRKYKTMPLVDLLNLAANETLARTFLTVATVFVTVMSLLLVGGDVLHGFSVAMLW
                     GLVVGTFSSIFVALPVLIYFNLRTGKEQEEAEQAEQVLP"
BASE COUNT          251 a          505 c          497 g          305 t
ORIGIN      
        1 cgctcgccaa cgtagcactg gtgctgaacc tggtgctgct gctggctctg ctgtcggtgc
       61 tgggcgccac gctgacgatg ccgggcatcg ccggcatcgt gctgaccatg ggcatggcgg
      121 tggacgccaa cgtgctgatc tacgagcgca tccgcgagga attgcgcaac ggccgctcca
      181 tcctttccgc cacccaggcc ggcttcgagc gcgccttcgg caccatcctc gacgccaacc
      241 tgaccaccct ggcggccgcc ggcctgctgt tcttcttcgg ctccggcccg atcaagggct
      301 tcgccgtgac gctgacgctg ggcctgatga cctcgatgtt caccgccatc atggtgaccc
      361 gtctgatggt cggcacctgg atccgggtgc gtcgtcccaa gacgatgccg ctctaaagga
      421 aacaccgatg agcagctttt acgcccgcct gatcgccaag acgccgaagt tcgacttcgt
      481 cggcaagcgc atcccggcct tcatcctgac ggcggtcctg atcctggggt cgatcggatc
      541 gatagccgtc aagggcttca atttcggcat cgacttcgcc ggcggcatcc tgatcgaggt
      601 gcaggcgcag caggacaagg ccgacctcgg cgccatgcgg cggtcgctgg aaggtctcaa
      661 tctgggcgaa gtgtcgttgc aggaattcgg cgcgtcgggc cgcgacgtca tggtccgcat
      721 ccagaagcag gagggcgacg agcgcgccca gatggcggcg ctggacaagg tcaagcaggc
      781 cttgggcacc ggctacgact atcgccgcgt cgagatcgtc ggccccaagg tgggcgagga
      841 actcaagcgc gacggcgtgc tggccgtggc gctggcggtg ctcgccattg ccgcctatgt
      901 gtggttccgc ttcgaatggc agttcggcgt cggcgcgctg atggcgacgt tccacgacgt
      961 catcctgacc ttcggcctgt tctcggtgac cgggctggaa ttcaatttga ccagcgtggc
     1021 ggcaattctg accattgccg gctattccat caacgacacc gtcgtgatct tcgaccgcgt
     1081 gcgcgaaaac ctgcgcaagt acaagacgat gccgttggtc gatctgctga atcttgcggc
     1141 caacgagacc ctggcccgca ccttcctgac cgtggccacc gtgttcgtca ccgtcatgtc
     1201 gctgctgctg gtcggcggtg acgtgctgca cggcttttcg gtcgccatgc tgtggggcct
     1261 ggtggtcggc accttctcgt cgatcttcgt ggcgctgccg gtcctgatct acttcaacct
     1321 gcgcaccggc aaggaacagg aagaggcgga gcaggcggaa caggttctgc cgtaaccttt
     1381 caatgggggc tgcggccccc atatgggtga gccatggaca tcactcccgt cgtctccgct
     1441 gatcgccagc tcatcaacgg ctatggcgac aacggcttca ccatttcggg aacgcgccac
     1501 aagggctcgg tcatcgtctt ccccggcgag acgctggcgt ggtcggccga attgacgg
//
LOCUS       DATIKR010000318         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_210570, whole genome shotgun sequence.
ACCESSION   DATIKR010000318 DATIKR010000000
VERSION     DATIKR010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210570"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VLL76_05045"
     CDS             <1..934
                     /locus_tag="VLL76_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSV28897.1"
                     /translation="FGTKLWNAARFCQMNECAPVDGFDPKAVKEIVNRWIVGKTAEVA
                     DKVAQALDGYRYDSAAGATYQFVWGTFCDWYLEFAKPIFQGSDEAAKAETRATTAWVL
                     DQTLHVLHPFMPFITEELWEALGTRQDQLMLRPWPRLEGLHDAAAEEEMDWVVRVIST
                     IRGVRSEMNVPPSVQVDMLVNGLTSAKEGWAKTHADLITRLGRLAAFDAHAGGDRIAQ
                     AFSHGAVQMVVDEATLVMPLAGVIDVDKERARLEKEIAKLDGEISKVDKKLGNPDFLA
                     KAKEEVVAEQRERRDEWSTARTKLAEALQRLSGA"
     gene            1009..>2788
                     /locus_tag="VLL76_05050"
     CDS             1009..>2788
                     /locus_tag="VLL76_05050"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV28898.1"
                     /translation="MLEFSERITRALTIRYIAVLAVLGALAIASFLALARLVADVEGG
                     SALINMAGRQRMLVERAALLSIQLPGLAEDSRRRQVAEQLADVLDQLEGAHLGLTGKL
                     PIARTDPPSESLRGLYFGPAGDVDARLKDFLARGRALATRAEAPLPRFDADAAQMVAA
                     AEGPLMQGLEAVVRQHQGEVQGRMVTLTALHGAALVALLLVLMLSAAVVFQPMVRRIR
                     DDIADRSKAERGLRESEERLWRILEESPVGVSVSRRSDGRVVFINNRFSEIVGAKRSE
                     IIGRSARDLFVDDAQRRRVVAELKRKGRIDDAEVEFRRRDGTPFHSLLNISATHFEGE
                     AVNLAWIYDISAIRKTEEKLKLVAKVVDTASEAVVITNSANRIEYVNPAFTTITEYGA
                     DEVVGQNPKMLQSGRHDGDFYRTMWQTIAEKGRWRGEIWNRRKSGEFYAEWLSIVAIK
                     DDAGNLTHHIAVFSDITHRKEDEERVWRQANFDALTGLPNRALFLDRLAQAVRQARRD
                     GKKFALMFIDLDGFKQVNDTLGHAAGNILLQQTSGRLTECMRASDTVARLAGDEFTVI
                     LQGIHGREDAAIVAGKILDKLSQPFDL"
BASE COUNT          479 a          947 c          931 g          431 t
ORIGIN      
        1 cttcggcacc aagctgtgga acgccgcgcg cttctgccag atgaacgaat gcgcgccggt
       61 cgatggcttc gaccccaagg cggtcaagga gatcgtcaac cgctggatcg tcggcaagac
      121 cgccgaggtc gctgacaagg tggcgcaggc actggacggc taccgctacg attcggcggc
      181 gggcgccacc taccagttcg tctggggcac cttctgcgac tggtacctgg aattcgccaa
      241 gccgatcttc cagggctcgg acgaggccgc caaggccgag acccgcgcca cgaccgcctg
      301 ggtgctggac cagaccttgc atgtgctgca tcccttcatg cccttcatca ccgaggagct
      361 gtgggaggcc ctgggaaccc gccaggacca attgatgctg cgcccgtggc cgcgcctgga
      421 gggactgcac gacgcggcgg ccgaggagga gatggactgg gtggtccgcg tcatctctac
      481 catccgcggc gtgcgctcgg aaatgaacgt gccgccgtcg gtgcaggtgg acatgctggt
      541 caacggcttg acgtcggcca aggaaggctg ggccaagacc catgccgacc tgatcacccg
      601 gctgggccgc ctggccgcct tcgacgccca tgccggcggc gaccgcatcg cccaggcctt
      661 ctcgcacggc gccgtgcaga tggtggtgga cgaggcgacc ctggtcatgc cgctggccgg
      721 cgtcatcgac gtcgacaagg agcgcgcccg cctggagaag gaaatcgcca agctcgacgg
      781 cgagatctcc aaggtggaca agaagctggg caatcccgac ttcctcgcca aggcgaagga
      841 ggaagtggtg gccgagcagc gcgagcgccg cgacgagtgg agcactgccc ggacgaagct
      901 ggccgaggcg ctgcaacgcc tttccggagc atgaaaatcg acgggggagc atggctcccc
      961 cgttgaaatc gcgttctgcc ttctgccgtt ccatgatatc acacggcgat gctggaattt
     1021 agcgaacgga tcacgcgtgc cctgacgatc cgctacatcg ccgtgctggc ggtgcttggc
     1081 gcgttggcga tcgcctcgtt cctggcgctg gcccgcctgg tggccgacgt cgagggcggt
     1141 tcggccctca tcaacatggc cggccgccag cgcatgctgg tcgagcgcgc ggcgctgctg
     1201 tcgatccaat tgcccggcct ggccgaggat tcccgccgcc gccaggtggc cgagcaactg
     1261 gccgacgtgc tggatcaatt ggagggcgcc catctcggcc tgaccgggaa actgccgatt
     1321 gcccgcaccg atccgccgtc ggaatccttg cgcgggctgt attttggccc ggccggcgat
     1381 gtggatgccc gcctcaagga cttcctggca cgcggccggg cgctggcgac ccgtgccgaa
     1441 gcccccctgc cgcgcttcga cgccgacgct gcccagatgg tggccgccgc cgaaggcccc
     1501 ctgatgcaag ggctggaggc tgtggtccgc cagcaccagg gcgaagtgca gggccgcatg
     1561 gtgaccctga ccgcgctgca cggcgccgcc ctggtggcgt tgctgctggt gctgatgctg
     1621 tcggcggccg tcgtgttcca gcccatggtc cgccgcatcc gagacgacat cgccgaccgc
     1681 tccaaggccg agcggggatt gcgcgaatcg gaagagcggc tgtggcgcat cctcgaggaa
     1741 agccccgtcg gcgtgtcggt gtcgcggcgc agcgacggtc gagtcgtctt catcaacaac
     1801 cgcttctccg agatcgtcgg cgccaagcgc tccgagatca tcgggcggtc cgcccgcgac
     1861 ctgttcgtcg acgacgccca gcgccgccgg gtggtcgccg agctgaagcg caaaggccgc
     1921 atcgacgacg ccgaggtcga attccgccgc cgcgacggca ccccgttcca cagcctgctc
     1981 aacatcagcg ccacccattt cgagggcgag gccgtcaacc tggcctggat ctacgacatc
     2041 tcggccatcc gcaagacgga ggagaagctg aagctggtgg ccaaggtggt ggacaccgcc
     2101 agcgaggcgg tggtcatcac caattcggcc aaccggatcg aatacgtcaa cccggccttc
     2161 accaccatca ccgaatacgg cgccgacgag gtggtcggcc agaacccgaa gatgctgcag
     2221 tccggccgcc acgatggcga tttctaccgc accatgtggc agaccatcgc cgagaagggg
     2281 cggtggcggg gcgaaatctg gaaccgccgc aaatcgggcg agttctatgc cgagtggctg
     2341 tccatcgtcg ccatcaagga cgatgccggc aatttgaccc accatatcgc cgtgttctcg
     2401 gacatcaccc accgcaagga ggacgaggag cgggtgtggc gccaggccaa tttcgacgcg
     2461 ttgaccggcc tgcccaaccg cgccctgttc ctcgaccgcc tggcccaggc ggtgcgtcag
     2521 gcgcgccgcg acggcaagaa attcgcgctg atgttcatcg acctcgacgg cttcaagcag
     2581 gtcaacgaca cgctgggcca cgccgccggc aacatcctgc tgcagcagac ctcgggccgc
     2641 ctgaccgaat gcatgcgagc ttccgatacg gtggcgcgcc tggccggcga cgagttcacg
     2701 gtgatcctgc agggcatcca cggccgcgag gacgccgcca tcgtcgccgg caagatcctc
     2761 gacaagctgt cgcagccctt cgatctgg
//
LOCUS       DATIKR010000319         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_29019, whole genome shotgun sequence.
ACCESSION   DATIKR010000319 DATIKR010000000
VERSION     DATIKR010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29019"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VLL76_05055"
     CDS             <1..927
                     /locus_tag="VLL76_05055"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV28899.1"
                     /translation="KPAEEEKPSGITAESQQPTVMRFLNGAVNAVKAAVPVLDSYNKF
                     ALHLYMAGGVETLCEFRKIGEAGKIKLTMSALETLGTKGDVARKFHEKLDEYVLEPRY
                     LGVVQAGRDAMGDFMVGDEGGAHSRIKDVMKEWNKPQEKKASIVTVMFTDMVGSTDLT
                     QERGDAAAQEIVRRHNSIVRGALAQFSGKEIKHTGDGIMASFASAASAVEATIHIQRQ
                     VMANNQRNPELELHLRIGLNAGEPIEEEDDLFGTTVQLAARVCAATNTDQTLCTGVVK
                     DLSFGKGAAFVSAGERNLKGFKDPIALYEVKY"
     gene            complement(1018..1599)
                     /locus_tag="VLL76_05060"
     CDS             complement(1018..1599)
                     /locus_tag="VLL76_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HSV28900.1"
                     /translation="MCSRYELNASAREVAGRFQLRVPPPLPNRAEVRPTDPALVVLPG
                     GESRLLRWGLDVSWDKRPLINARAETLASRSAFKRLLGSRILIPATLWWEWRKNADGS
                     KTKMRIRRPDGDLFAFAGLVDGERFTMVTCAPAPSVAHVHDRMPSVLSPAAEADWLDP
                     AVPFADVAANLEPYREALDVAVDEDKPAQGSLF"
     gene            complement(1602..>1729)
                     /locus_tag="VLL76_05065"
     CDS             complement(1602..>1729)
                     /locus_tag="VLL76_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TlyA family rRNA
                     (cytidine-2'-O)-methyltransferase"
                     /protein_id="HSV28901.1"
                     /translation="CDRISAWLAALPGWSVVGLCESPIKGPEGNKEFLIVGRFEG"
BASE COUNT          323 a          592 c          565 g          249 t
ORIGIN      
        1 aagccggccg aggaggaaaa gccctcgggc atcaccgccg aatcgcagca gccgaccgtg
       61 atgcgattcc tcaacggcgc cgtcaacgcc gtcaaggcgg cggtgccggt gctggattcc
      121 tacaacaagt tcgcgttgca cctgtacatg gccggcggcg ttgagacgct gtgtgagttc
      181 cgcaagatcg gcgaggccgg caagatcaag ctgaccatgt cggcgctcga gaccttgggc
      241 actaagggcg acgttgcccg caagttccac gagaagctgg acgaatacgt gctggagccg
      301 cgctacctgg gcgtggtcca ggccgggcgc gacgccatgg gcgacttcat ggtcggcgac
      361 gagggcggcg cccattcccg catcaaggac gtgatgaagg aatggaacaa gccgcaggag
      421 aagaaggcct cgatcgtgac ggtgatgttc accgacatgg tcggctccac cgacctgacc
      481 caggaacgcg gcgacgccgc cgcccaggaa atcgtccgcc gccacaattc catcgtgcgc
      541 ggcgccctgg cccagttcag cggcaaggaa atcaagcata ccggcgacgg catcatggcg
      601 tcgttcgcct cggccgccag cgccgtcgag gccaccatcc acatccagcg ccaggtcatg
      661 gccaacaacc agcgcaatcc cgagctggaa ctgcacctgc gcatcggcct caacgccggc
      721 gaacccatcg aggaagagga cgacctgttc ggcaccacgg tgcagttggc tgcccgcgtc
      781 tgcgccgcca ccaacaccga ccagaccctg tgcaccggcg tggtcaagga tttgtcgttc
      841 ggcaagggcg ccgccttcgt atcggcggga gagcgcaacc tcaagggctt caaggacccc
      901 atcgccctgt acgaggtgaa gtactagggg cgcaatgcgt ttccggtaag ggctcgcccc
      961 ggaggggcgg ccgccaaagg caaagctaga gccggtacca tttgaatgga agcggctcta
     1021 gaacaaactc ccctgcgccg gcttgtcctc gtccaccgcc acgtccagcg cctccctgta
     1081 gggttccagg ttggcagcca cgtccgcgaa cggcaccgcc gggtccagcc agtcggcttc
     1141 cgccgcggga gacagcaccg acggcatgcg gtcgtggaca tgggcgacgg agggcgcggg
     1201 ggcgcaggtg accatggtga agcgttcgcc gtccaccagc ccggcgaagg cgaacaggtc
     1261 gccatcgggc cggcggatgc gcatcttggt cttcgagccg tcggcgttct tgcgccattc
     1321 ccaccacagc gtggcgggga tcaggatgcg gctgcccaac aggcgcttga acgccgaccg
     1381 gctggccagc gtctcagcgc gggcgttgat cagcggccgc ttgtcccacg acacgtcgag
     1441 gccccagcgc aacagccggc tctcgccgcc cggcagcacc accagggccg ggtcggtggg
     1501 ccgcacctcg gcccggttgg gcaaaggcgg cggcacccgc aactggaagc ggcccgcgac
     1561 ctcgcgcgcc gaggcgttca gttcatagcg cgagcacatg ctcagccctc gaaacgtccg
     1621 acgatcagga attccttgtt gccttccggc cccttgatcg ggctttcgca caggccgacc
     1681 acgctccagc ccggcaatgc cgccagccat gccgatatgc ggtcgcaca
//
LOCUS       DATIKR010000320         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_4903, whole genome shotgun sequence.
ACCESSION   DATIKR010000320 DATIKR010000000
VERSION     DATIKR010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4903"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1514
                     /locus_tag="VLL76_05070"
     CDS             <1..>1514
                     /locus_tag="VLL76_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HSV28902.1"
                     /translation="AALVAERERWPLWLPVLLGAGVAAYFALPSEPPAWGGGIAFLLA
                     AVAAWALRRTPPAMLALVAMATVALGFASAQGRAARVAAPALERPSGAVMVGGLAEEV
                     EILAGGSQRVTLSESWIDGMAAPPRIRIRLKPDAPAVAVGNRITVRALLTPPPQPAMP
                     GAFDFARHAWFQGLGAVGHAIGQPEIEPAEAGFGLGLNAFRQALTARIHEALPGPEGG
                     VAAALITGEQSGIAQPVLDAYRDSGLAHLLSISGLHMTMVAGLVFFVVRGGLALVPSI
                     ALRHPIKKWAAVVALVATFLYMLMAGSPVPAQRSFLMTAIVLVAVLLDRQAMSMRLVA
                     WAAVAVLALSPEAVVGPSFQMSFAAVVALIAAYEVVAPRLAAWKADRPGLVAGVALYL
                     GGVVFSTLVAGTATAVYGIYHFNRFAVFSVVANMLAVPVTGFLVMPFALVAILLMPLG
                     LEELALVPMGWGVEAVNLVAAEVASWPGAAITLPVLPPWGLAAFTVGGAWLCLW"
BASE COUNT          144 a          532 c          563 g          275 t
ORIGIN      
        1 tggcggcgct ggtggccgag cgtgagcgct ggccgttgtg gctgcccgtg ctgctggggg
       61 cgggggtggc ggcgtatttc gcactgccgt ccgagccgcc ggcatggggg ggcggcatcg
      121 ctttcctgct ggcggcggtc gccgcctggg ccttgcgccg caccccgcct gccatgctgg
      181 cgctggtggc gatggcgacg gtggctttgg ggttcgcttc ggcgcaaggg cgcgcggcac
      241 gggtggcggc gccggcgctg gaacggccgt cgggcgccgt gatggtcggc ggcctggccg
      301 aggaggtcga gatcctggcc ggcggcagcc agcgcgtcac cttgtcggaa tcctggatcg
      361 acggcatggc ggcgccgccg cgcatccgca tccgcctcaa gcccgacgct cccgccgtgg
      421 ccgtgggcaa ccgcatcacg gtgcgggcgt tgctgacgcc accgccgcaa ccggccatgc
      481 cgggcgcctt cgattttgcc cgccacgcct ggttccaggg gctgggagcg gtgggccacg
      541 ccatcggcca gcccgagatc gaaccggccg aagccgggtt cggactgggc ctcaacgcct
      601 tccgccaggc cctgaccgcc cgcatccacg aggcgctgcc cggtcccgaa ggcggcgtcg
      661 ccgccgccct gatcaccggc gagcaatccg gcatcgccca gccggtgctc gacgcctatc
      721 gcgattccgg ccttgcccat ctgctgtcca tctcgggcct gcacatgacc atggtggccg
      781 ggctggtgtt cttcgtggtg cgcggcgggc tggcgctggt gccgtccatc gcgctgcgcc
      841 atcccatcaa gaagtgggcg gcggtcgtcg ccttggtcgc caccttcctc tacatgctga
      901 tggccggttc gccggtgccg gcgcagcgct ccttcctgat gaccgccatc gtgctggtgg
      961 cggtgctgct cgaccgccag gccatgtcca tgcggctggt ggcatgggcc gcggtggcgg
     1021 tgttggcgct gtcgcccgag gcggtggtcg gtcccagttt ccagatgtcc ttcgccgccg
     1081 tggtcgccct gatcgccgcc tacgaagtcg tcgccccacg ccttgccgcc tggaaggccg
     1141 accgccctgg gctggtggcc ggcgtcgcgc tgtatctcgg cggcgtggtg ttcagcaccc
     1201 tggtggcggg caccgccacg gcggtctacg gcatctatca cttcaaccgg ttcgcggtgt
     1261 tctcggtggt cgccaacatg ctggcggtgc cggtcaccgg ctttttggtg atgcccttcg
     1321 cgctggttgc catcctgctg atgccgctgg ggctggaaga actggctctg gtgcccatgg
     1381 gctggggcgt cgaggcggtc aacctggtgg cggccgaggt ggcgtcgtgg cccggtgccg
     1441 ccatcaccct gccggtgctg cccccctggg gcctggccgc cttcaccgtc ggcggcgcct
     1501 ggctgtgcct gtgg
//
LOCUS       DATIKR010000321         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_65576, whole genome shotgun sequence.
ACCESSION   DATIKR010000321 DATIKR010000000
VERSION     DATIKR010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65576"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VLL76_05075"
     CDS             <1..376
                     /locus_tag="VLL76_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28903.1"
                     /translation="RHGLTIDEAGGLYFAVGARFGLGWLRAAAERLAARGHWQKLAAV
                     AAIEDLFAHQRDIAAAVAAEAPGLAAAEALEAWVAAHAPPVGRIDALVAELRAAPEID
                     LAMLSVVNRQLRVLMEAGPAIR"
     gene            complement(339..>2067)
                     /locus_tag="VLL76_05080"
     CDS             complement(339..>2067)
                     /locus_tag="VLL76_05080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28904.1"
                     /translation="ALGDLAEGLAPPSDADSLAYHFAIPRQILAEGCAVFVERAADGA
                     APLLQQMTYLAALALGGETALTLWCMLSGWAAILVTYALARRWLSRAWALTVAAVFMT
                     LPAFLYGAGTGQVEARLAGFTVVAVAAAVAAGRGGGPGAAVVAGLAGGFAMASKYPGL
                     LLVALCGLVILGRRGGLGRAVAYSAAALAVGSQWYVWNWLHTGDPVFPMLFGVLPYHP
                     SVAWNPDQHAAFGQWVRTLEAPSPRGVVDMLLYPLRAILDAPEAWEAGRTGLGPAALL
                     LAPFAAVGAWRRRHGLATHDLTVMAAVCVGFYLLWFFFGASQRVRHYLPFMPLILVGL
                     AVAAHRAVRGAPTRHAVAAALAATIMVQSAAQAIMVRPFVQRMTQGQTREEYLIRTVP
                     FAFAPFWINATLDPASHKVLTTARQWLYLLDVPYHLVHPYQQAVVEARPGMSDVGRFW
                     AQMRAAGITHVALFLPTTNRLVHTGEGGMVDLIVLAQQAGCLGEVKRLEGPVHGGSRT
                     LSGFGGATLGSVSILALTPAGCPFARAVSIQMEPAPVFAFGGRPSGASQDQTPLGLIG
                     SPARPPSTP"
BASE COUNT          330 a          753 c          751 g          233 t
ORIGIN      
        1 ccgccacggc ctgaccatcg acgaggccgg cgggctgtat ttcgccgtcg gcgcccgctt
       61 cgggctgggc tggctgcgag cggcggcgga acggctggcg gcgcgtggcc attggcagaa
      121 gctggcggcc gtcgccgcca tcgaggacct gttcgcccac cagcgcgaca tcgccgccgc
      181 ggtggcggca gaagcgccgg gcctggcggc ggccgaggcg ctggaggcgt gggtggccgc
      241 ccacgccccg ccggtcgggc gcatcgacgc cctggtcgcc gaattgcggg cggcgcccga
      301 gatcgacctg gccatgctgt cggtggtcaa ccgccagctc agggtgttga tggaggccgg
      361 gccggcgatc cgataagccc gagcggcgtc tgatcctggc tcgccccgga ggggcggcca
      421 ccaaaggcaa aaactggagc cggttccatt tgaatggaaa cggctctagc gaacggacag
      481 ccggccggcg tgagcgccag gatgctgacg ctgcccaggg tcgccccgcc gaatcccgac
      541 agggtgcgcg acccgccgtg aaccggcccc tccagccgct tgacctcgcc aaggcatccc
      601 gcttgctgcg ccagcacgat caggtcgacc atgccgccct cgccggtatg gaccaggcgg
      661 ttggtggtgg gcaggaacag cgcgacatgg gtgatgccgg ccgctcgcat ctgcgcccag
      721 aaccggccga cgtccgacat gcccggccgc gcttcgacca ccgcctgctg gtaggggtgc
      781 accaaatggt agggcacgtc cagcaggtac agccattgcc gcgccgtcgt cagcaccttg
      841 tgggacgcgg ggtcgagcgt cgcgttgatc cagaacggcg cgaaggcgaa gggcacggtg
      901 cggatcagat actcttcacg cgtctgtcct tgcgtcatgc gctggacgaa cggccggacc
      961 atgatggcct gggccgccga ttgcaccatg atggtcgcgg ccagggcggc ggcaacggca
     1021 tggcgggtgg gcgcgccccg gacggcacgg tgggcggcga cggccaggcc caccaggatc
     1081 agcggcatga acggcagata atgccgcacc cgctgcgacg ctccgaagaa gaaccacagc
     1141 agatagaagc cgacgcacac cgccgccatc acggtcaggt cgtgggtcgc caggccgtgc
     1201 cgccgccgcc acgcgcccac ggcggcgaag ggcgccagca gcagcgccgc cggccccagg
     1261 ccggtacggc cggcctccca ggcttccggc gcgtccagga tcgcccgcag gggatacagc
     1321 agcatgtcca ccacgccgcg cggcgacggc gcctccagcg tgcgcaccca ttggccgaag
     1381 gctgcgtgct ggtcggggtt ccacgccacc gacgggtgat agggcaacac gccgaacagc
     1441 atggggaaga ccgggtcgcc ggtatgcagc cagttccaca cgtaccattg cgatcccacc
     1501 gccagggcgg cggcggaata cgccaccgcg cggcccaggc cgccgcgccg gcccaggatc
     1561 accaggccgc acagcgccac cagcagcagg ccgggatact tgctggccat ggcgaagccg
     1621 ccggccaggc cggccaccac ggcggcgccc gggccgccgc cgcgtccggc agcgaccgcc
     1681 gccgccacgg cgactacggt gaaacccgcc agccgggcct cgacctggcc ggtgccggcg
     1741 ccgtacagga aggccggcag ggtcatgaac accgccgcca cggtcagcgc ccaggcgcgc
     1801 gacagccagc gccgcgccag ggcgtaggtg accaggatgg cggcccagcc gctgagcatg
     1861 caccacaggg tcagcgccgt ctcgccgccc agcgccagcg cggccagata ggtcatctgc
     1921 tgcagcagcg gggcggcgcc gtcggcggcg cgctcgacga acacggcgca gccctcggcc
     1981 aggatctggc gcgggatggc gaaatggtag gccaggctgt cggcgtcact gggcggcgcc
     2041 agcccttccg ccaaatcgcc cagcgcc
//
LOCUS       DATIKR010000322         3529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_89698, whole genome shotgun sequence.
ACCESSION   DATIKR010000322 DATIKR010000000
VERSION     DATIKR010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89698"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VLL76_05085"
     CDS             <1..641
                     /locus_tag="VLL76_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010321625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV28905.1"
                     /translation="NEAYLEAAWLSLKVAATSATGALVLGTLAALVLVRFGRFRSRSV
                     FTGLVTAPLVMPEIILGLAMLLLFVALEQVIGWPDGRGFTTIAIAHTTVGMAYATVVV
                     RSRLAQMDASLEEAAMDLGARPVKVFFLITLPVIAPSLAAAWLLAFTLSLDDVVVAQF
                     VSGPGATTLPIEVFSSVRLGISPQVNALGTIIVAIVAVLIFTAWWLTKKRPS"
     gene            complement(651..2663)
                     /locus_tag="VLL76_05090"
     CDS             complement(651..2663)
                     /locus_tag="VLL76_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV28906.1"
                     /translation="MRLSDIRIAYKVGAGFAVVLALLVIVGAVGFSGLSSADADFQAY
                     RGLARDTNAIGRVQANMLQTRIAAKNFLLTGSPVDKAQVQEFAAKTESLIQEMESDLD
                     DASQIQRTREIRSALVRYATDFQKAAVLRSSQDELLDKQLGVAGPEVERALTAAMESA
                     YKDGDSEGAYRIGLAIRDLLLGRLYAQKFLILGEEAFHQRASSQLAATADGVAALGAR
                     FNTGKRHDLLMQAKRNLDDYLTAYAELYAAYQSRAKLVTESLDPIGANVAKSVEDFKL
                     GSKAQQDELGPRAAANVHSSKVTIGAASFAALALGVIGAFFIGHGIAGPIKSMTQAMQ
                     SLANGNLTVEIPATTHKDEIGAMAGAVQVFKDNANRVEALRREQEQQDARLAAERKAA
                     MNQMADNFESSVMGVVKTVSSSATEMQVTAQSMSAAAQQSSAQATTVAAAAEQASANV
                     QTVASAAEELSSSITEISRQVSEAARVSGLASDEAAATNTMVQALAAAADRISDVVKL
                     INDIASQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTGRATEEISGQIAAVQ
                     EETRRAVDAIANIAKVIDQVKEISSGIASAVEEQGAATKEIARNVEQAARGTEDVSSN
                     IGGVMESATSTGAAAEQVNTSASDLARNSELLRSEVTNFLATVRAG"
     gene            2800..>3529
                     /locus_tag="VLL76_05095"
     CDS             2800..>3529
                     /locus_tag="VLL76_05095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV28907.1"
                     /translation="MNWAVIVKRVREQHGLKQAAMAELLGVDQATVSRWECGQHIPAL
                     SVRNKLARMLAHTNTHNARLDERLADQPDAWVVDGAETLLASAYRRAPVGLCFMDTDL
                     RYVFVNERLAAINGLPVQAHLGRQLAEVLGDLGQRLEPVYRQVLDSGAPIIEMEVSGS
                     VPGYIGPSRYWAVSAYPVMAKGYRRLGLSVAVTDITDRKEVETGLRSVQESLLTAEAR
                     FRTVLNLSPAGFLLVKPIRGADDEI"
BASE COUNT          528 a         1115 c         1166 g          720 t
ORIGIN      
        1 acaacgaagc ctatctggaa gccgcctggc tgtcgctcaa ggtggcggcc acgtcggcga
       61 ccggtgcgtt ggtcctgggc acgctggcgg cgctggtgct ggtacgcttc ggccgcttcc
      121 gctcgcgctc ggtgttcacc gggctggtca cggcgccctt ggtgatgccg gaaatcatcc
      181 ttggcctcgc catgctgctg ctgttcgtgg cgctggagca ggtgatcggc tggcccgacg
      241 ggcgcggctt caccaccatc gccatcgccc acaccaccgt cggcatggcc tatgccaccg
      301 tggtcgtgcg ctcgcgcctg gcccagatgg atgccagcct ggaagaggcg gccatggatc
      361 tgggcgcgcg gcccgtgaag gtgttcttcc tgatcaccct gccggtgatc gcgccgtcgc
      421 tggcggcggc ctggctgctg gccttcaccc tcagcctcga cgacgtagtg gtggcgcagt
      481 tcgtctcggg ccccggcgcc acgaccctgc ccatcgaggt gttttccagc gtgcgcctgg
      541 ggatttctcc ccaggtcaac gcgctgggca ccatcatcgt cgccatcgtc gcggtgctga
      601 tcttcaccgc gtggtggctg accaaaaagc gcccgtctta gagcgcgttt tcagcctgcc
      661 cgcacggtcg ccaggaagtt ggtgacctcg gaccgcagga gttcggaatt cctggccaga
      721 tcgctggccg aggtgttgac ctgttctgct gccgctccgg tgctggtggc cgattccatc
      781 acgccgccga tgttgctgga gacgtcctcg gttccccgcg cagcttgttc gacattgcgg
      841 gcgatttcct tcgtcgccgc gccctgctcc tcgacagccg aggcgatgcc ggacgagatc
      901 tccttcactt ggtcgatcac cttggcgatg ttggcgatgg catcgaccgc gcggcgggtc
      961 tcttcctgca cggcggcgat ttgaccgctg atttcctcgg tggcacggcc ggtctggttg
     1021 gccaggcttt tcacctcgtt ggccacgacg gcgaagcctt tgccggcgtc gccggcgcgg
     1081 gcggcttcga tggtggcgtt cagggccagc aggttggtct ggctggcgat gtcgttgatc
     1141 agcttgacca cgtcgctgat tcggtcggcg gctgccgcca gcgcctgaac catggtgttg
     1201 gtcgcggcag cctcgtccga ggcaagaccg gaaacgcggg cggcttcgct gacctgacgc
     1261 gagatctcgg tgatggacga cgacaattcc tcggcggccg aggcgaccgt ctggacattg
     1321 gccgaggcct gttccgccgc cgccgccacg gtggtggcct gggcgctgga ttgctgggcc
     1381 gccgccgaca tggattgggc ggtcacctgc atctcggtgg ccgaggacga taccgtcttg
     1441 accacgccca tgacgctgga ctcgaaattg tcggccatct ggttcatggc cgccttgcgc
     1501 tcggccgcca accgggcgtc ttgctgctcc tgttcacggc gaagcgcttc cacccggttg
     1561 gcgttgtcct tgaatacctg gaccgcgccg gccatggcgc cgatttcatc cttatgggtg
     1621 gtcgccggga tttccacggt gaggttgccg ttcgccagcg actgcatggc ctgggtcatg
     1681 gacttgatcg gaccggcgat gccgtgcccg atgaagaacg cgccgatgac gccaagcgcc
     1741 agagcggcga atgacgcggc tccgatggtg accttcgacg aatggacgtt ggccgcggcg
     1801 cgcggaccca actcgtcctg ctgcgccttt gaccccagct tgaagtcctc gaccgatttg
     1861 gcgacatttg cgccgatggg gtccaatgat tcggtcacca atttggcccg gctttgatag
     1921 gcggcataga gctccgcata ggccgtcaaa tagtcatcga ggttgcgctt cgcctgcatc
     1981 agcagatcat ggcgcttgcc cgtattgaag cgcgcaccca gggccgcgac cccgtcggcg
     2041 gtggcggcca gttggctgga ggcgcgctgg tggaacgcct cttcgcccag gatcaggaac
     2101 ttctgggcat acaggcggcc cagcaacaga tcgcggatcg ccaggccgat gcggtaggca
     2161 ccttcgctgt cgccgtcctt gtaggcgctc tccatggcag ccgtcagggc tcgttccact
     2221 tccggacccg cgaccccgag ctgcttgtcc agcaattcgt cctgggagct ccgcaggacg
     2281 gccgccttct ggaaatccgt cgcatagcgg acgagggccg acctgatctc gcgagtgcgc
     2341 tgaatctggc tggcatcgtc caggtcggat tccatctcct ggatcaagct ctcggtcttg
     2401 gctgcgaatt cctgcacctg cgccttgtcc accggagaac cggtcagcag gaagtttttg
     2461 gcggcgatgc gggtctgaag catgttggcc tggacccggc cgatcgcgtt ggtgtcccgc
     2521 gccaggcccc gataggcctg gaagtcggcg tcggcgctgc tcaagccgct aaagccgacg
     2581 gcgccgacga tgacaagaag ggccagaacg acggcaaagc ctgcgcccac cttgtaggcg
     2641 atccggatgt ccgatagccg cattgctttt atcctttcat cggtagcgtg gcacctcaac
     2701 ggccgcacct gatgcatata ctttcgatat gtggccttat gtgtatacga tacggatatg
     2761 cgtttatgcg cgatcgctcc gctgtgttgg ggggtgctga tgaactgggc ggttatcgtc
     2821 aagcgggtca gggagcagca tgggttgaaa caggcggcaa tggcggaatt gctgggcgtc
     2881 gatcaggcga ctgtttcccg ttgggaatgt ggccagcaca tcccggcgct gtctgtgcgt
     2941 aataagctgg cgcgaatgct agcgcatacg aatacgcata acgcgcgcct ggacgagcgg
     3001 cttgccgacc agccggatgc ctgggtggtc gatggggccg agacgctgtt ggcgtcggct
     3061 tatcgaaggg cgccggtcgg tctgtgtttc atggacaccg acttgcgcta tgtcttcgtc
     3121 aacgagcgct tggccgccat caacggcttg ccggtccaag cccatcttgg ccgccaattg
     3181 gccgaggtgc tgggcgatct ggggcagcga ctggaacccg tttaccggca agtcctcgac
     3241 agcggagcgc cgattatcga gatggaagtc agcggctcgg tccccggcta tatcggcccc
     3301 tcgcgctatt gggccgtcag cgcctaccct gtgatggcga agggttatcg ccggctcggc
     3361 ctgagtgtcg cggtcaccga catcaccgac aggaaggagg tcgaaacggg gctgcgatcg
     3421 gtgcaggaat cattgctcac tgccgaggcc cgctttcgca ccgtgctgaa cctctcaccg
     3481 gccggcttct tactggtcaa gcccatccgc ggcgctgacg acgagatcg
//
LOCUS       DATIKR010000323         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_16594, whole genome shotgun sequence.
ACCESSION   DATIKR010000323 DATIKR010000000
VERSION     DATIKR010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16594"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1694
                     /locus_tag="VLL76_05100"
     CDS             <1..>1694
                     /locus_tag="VLL76_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HSV28908.1"
                     /translation="ELERRRARLLRNYKIQEVIKRRQIMLVQVVKEERGNKGAALTTY
                     LSLAGRYCVLMPNTARGGGVSRKIVNATDRRGLKSIASELEIPDGMAVIVRTAGSERS
                     KTEIKRDYEYLMRAWDSVRDLTLNSSAPALVYEEGSLIKRSIRDLYSRDIDEVLVDGD
                     EGYRLAKDYMRMLTPSHAKKVQPYRDPVMPMFHRYQVETQLDAMHSPVVQLKSGGYIV
                     ISQTEALVAIDVNSGRATKERHIEETALKTNLEAADEVARQLRLRDLAGLIVIDFIDM
                     EENRNNHAVERRLKEALKNDRARIQVGKISAFGLLELSRQRLRPSLQETTFQPCPHCA
                     GTGLVRSVESAAVHVLRAIEEEGIRRRSSEVTVFVSSAIALYILNQKREALAAIEERY
                     QFQVFLLGDDSLIPPNFRMERVKAENRPELPVAPVALQAPVEEEDEVVEEEEEGEEEE
                     ASAEAQGEGGDQQGDRKRRRRRRRKRRGGEGQPSQDDLAAGAAEGEGEDSEEGDEDED
                     AGSEARADGPEGETEEERRKRRRGRRGGRRRRRNREDGQREDGQTPAPVPELGPEV"
BASE COUNT          314 a          568 c          583 g          229 t
ORIGIN      
        1 aggaactgga gcgccgccgc gcccgcctgc tgcgcaacta caagattcag gaagtgatca
       61 agcgccggca gatcatgctg gtgcaggtcg tcaaggaaga gcgcggcaac aagggcgcgg
      121 cgctgaccac ctacctgtcg ctggccggtc gctattgcgt gctgatgccc aacaccgccc
      181 gtggcggcgg ggtgtcgcgc aagatcgtca acgccaccga ccgccgcggc ctgaagtcca
      241 tcgccagcga gctggagatt ccggacggca tggcggtgat cgtgcgcacg gccggttccg
      301 agcgttcgaa gaccgagatc aagcgcgact acgaatacct gatgcgcgcc tgggacagcg
      361 tgcgcgacct gacgctgaac tcgtcggcgc cggccttggt gtacgaggaa ggcagcctga
      421 tcaagcgctc gatccgcgac ctgtattcgc gtgacatcga cgaggtgctg gtcgacggcg
      481 acgagggcta tcgcctcgcc aaggactaca tgcgcatgct gacccccagc catgccaaga
      541 aggtccagcc ctatcgcgac cccgtgatgc ccatgttcca ccgctatcag gtggaaaccc
      601 agctcgacgc catgcattcg ccggtggtgc agctgaagtc gggcggctac atcgtcatca
      661 gccagacgga agctttggtc gccatcgacg tcaactcggg ccgcgccacc aaggagcgcc
      721 acatcgagga gacggcgctg aagacgaacc tggaggccgc cgacgaggtg gcccgccagt
      781 tgcgcctgcg cgaccttgcc ggtctcatcg tgatcgattt catcgacatg gaggagaacc
      841 gcaacaacca cgccgtcgag cgccgcctca aggaagcgct gaagaacgat cgcgcccgca
      901 tccaggtcgg caagatcagc gccttcggcc tgctggaact gtcgcgccag cgcctgcgcc
      961 cgtcgttgca ggaaaccacc ttccagccct gcccgcattg cgccggcacc ggcctggtcc
     1021 gctcggtcga atcggccgcg gtgcatgtgc tgcgcgccat cgaggaagag ggcatccgcc
     1081 gtcgttcgtc ggaagtgacg gtgttcgtct ccagcgccat cgcgctgtac atcctcaacc
     1141 agaagcgcga agccctggcc gccatcgagg aacgctacca gttccaggtg ttcctgctgg
     1201 gtgacgattc gctgatcccg ccgaacttcc gcatggagcg cgtcaaggcc gagaaccggc
     1261 ccgagctgcc ggtcgccccg gtcgcgctgc aggctccggt cgaggaagag gacgaggtcg
     1321 tcgaggaaga ggaagagggc gaggaggagg aagcctccgc cgaggcccaa ggcgagggcg
     1381 gcgaccagca gggcgaccgc aagcgccgtc gccgtcgccg ccgcaagcgt cgtggtggcg
     1441 aaggccagcc gtcgcaggac gaccttgccg ccggcgccgc cgagggtgag ggcgaggatt
     1501 ccgaagaggg tgacgaggac gaggatgccg ggtccgaggc ccgcgccgac ggccccgagg
     1561 gcgagaccga ggaggaacgc cgcaagcgcc gccgtggccg ccgtggcggc cgccgccgtc
     1621 gccgcaatcg cgaagacggc cagcgcgagg acggccagac tccggctccg gtgcccgaac
     1681 tcggccccga ggtg
//
LOCUS       DATIKR010000324         2169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_29102, whole genome shotgun sequence.
ACCESSION   DATIKR010000324 DATIKR010000000
VERSION     DATIKR010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29102"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..166
                     /locus_tag="VLL76_05105"
     CDS             <1..166
                     /locus_tag="VLL76_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HSV28909.1"
                     /translation="RKEAAEAGIDPEGMADDALVRAMVANPAVIERPIVVAGGKAALG
                     RPPESVLEIL"
     gene            279..563
                     /locus_tag="VLL76_05110"
     CDS             279..563
                     /locus_tag="VLL76_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28910.1"
                     /translation="MGRDSYQQTMEQRFRDLSFQIECVKARLSESSDGLRRELAGTLS
                     LLERRRDIMREKLDALQDEPDGTWEDLKAEVEDEWDALCQDFEERVANLA"
     gene            complement(560..1591)
                     /locus_tag="VLL76_05115"
     CDS             complement(560..1591)
                     /locus_tag="VLL76_05115"
                     /inference="COORDINATES: protein motif:HMM:NF023701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HSV28911.1"
                     /translation="MKQSFVAWTPEQSRYYVETLQQFEAWGDADSRVRTLAGAMAWKT
                     AKGRQYLVRIRDRGQSSLGPRSPETEAMLHAFQADKTEAVKRLRAAESRLAELAGFNI
                     AARLNRVPKRAAGLLTMLARRGLLGRTIHVVGTHALYAYEAMAAAFLTPDLMETSDLD
                     FLVDPRRRASLRLAVAGVPPQRIIDVLREIDPSFEPVPKRKFSARNRDDFVVDLIKAA
                     PKDPIRPSAPVAAGDIEPAEIVDLKWLVNAPKVQVMAVGEDGFPVPMSVPDPRAYALY
                     KFHISQDPRREPVKKIRDAAQAEALVALVDARLPTYPFDPDQLRMFPRPLRQGVAVNP
                     LWSTAPDAS"
     gene            complement(1822..>2169)
                     /locus_tag="VLL76_05120"
     CDS             complement(1822..>2169)
                     /locus_tag="VLL76_05120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28912.1"
                     /translation="QDAAKQPTAAEPVKTAEEQRKETADAVHRQVGEMQQKGAEAEAD
                     SKFAAEVKSLYQQLKALIEQQRRRAKQQDGEMDRFAADVTEAGRQIDDALAGNAAPAM
                     PAMPAGQMVNLSV"
BASE COUNT          363 a          695 c          725 g          386 t
ORIGIN      
        1 ccgcaaggaa gccgccgagg ccggcatcga ccccgagggc atggccgacg acgccctggt
       61 ccgcgccatg gtcgccaacc cggccgtgat cgagcgcccc atcgtggtcg ccggcggcaa
      121 ggccgccctg ggccgcccgc ccgagagcgt gctggaaatc ctgtgatttt cccaatgggc
      181 tgccactaac gtggcagccc tatcccggat gctttcttgc cccgaacggg gtggcggcgg
      241 caccctttgc ctatcccgat gcaaggcgga ggcggcgaat gggcagggac agctaccagc
      301 agaccatgga acagcgcttt cgcgacctgt cgtttcagat cgaatgcgtc aaggcccgcc
      361 tgtcggaaag ctcggacggc ctgcggcggg aattggccgg caccttgtcc ctgctggaac
      421 gccgccgcga catcatgcgc gagaagctgg acgccctgca ggacgaaccc gacggcacct
      481 gggaagacct caaggccgag gtcgaggacg aatgggacgc cctgtgccag gatttcgagg
      541 agcgggtggc gaatttggcc tagctggcgt ccggggcggt ggaccacaac gggttgaccg
      601 ccacgccctg gcgcaggggg cgtgggaaca tgcgaagctg atcagggtcg aagggatagg
      661 tcggcagccg tgcgtccacc aacgccacca gcgcctcggc ttgggcggcg tcgcggattt
      721 tcttgaccgg ctcgcgccgc gggtcctggc tgatatggaa tttgtagagg gcataggcgc
      781 gcgggtcggg gaccgacatg ggcacgggaa agccgtcctc ccccaccgcc atgacctgga
      841 ccttgggtgc gttcaccagc cacttgagat cgacgatttc ggccggctcg atgtcgccgg
      901 cggcgacggg ggctgacggt cgaatgggat ccttgggcgc ggccttgatc aggtcgacca
      961 cgaaatcatc ccggttgcgg gctgaaaact tccgcttcgg caccggctcg aacgatgggt
     1021 cgatttcgcg cagcacgtcg atgatccgtt gcggcggcac gccggccacg gccagcctca
     1081 ggctggcacg ccggcgcgga tccaccagga aatcaaggtc ggatgtttcc atcagatcag
     1141 gggtcaggaa ggcggcggcc atggcctcgt aggcatagag cgcgtgggtt ccgaccacat
     1201 ggatcgtccg ccccagcagc cccctgcggg ccagcatggt caacaggccg gctgcccgtt
     1261 tgggcacccg gttaaggcgg gccgcgatgt tgaaaccggc cagttcggcc aaccggcttt
     1321 ccgccgcgcg cagccgcttg accgcctcgg tcttgtcggc ctggaacgcg tgcagcatcg
     1381 cttcggtctc tggcgatcgt ggtcccagcg acgactgacc ccggtcgcga atccgaacca
     1441 ggtattgccg acccttggcc gtcttccacg ccatggcgcc ggccagcgtg cgaacccggg
     1501 aatcagcgtc gccccatgct tcgaactgct gcaaggtctc gacgtaataa cgggattgtt
     1561 ctggcgtcca ggcgacaaac gattgtttca ccgcgcgttt ccatggtgag acgtaggacg
     1621 gtcagtttag acggaaaccc cagccggatc aaagcgatat aaatgatgtt attgaattcg
     1681 ctgctgtttc caccgatttg tcgcggcgat ggccgctgcg tggaaacgcc ataaaaatca
     1741 gccagttacc tactatcaca ctgattgact tgatttttcc actcatggcc tggaaaacgg
     1801 gcgcaggagt ggaaaaccca atcaaaccga caggttgacc atctgtccgg ccggcatggc
     1861 cggcatggcg ggggcggcgt tgcccgcgag ggcgtcgtcg atctggcggc cggcctcggt
     1921 cacgtcggcg gcgaagcggt ccatttcgcc gtcctgctgc ttggcgcggc ggcgctgctg
     1981 ttcgatcagg gccttgagct gctggtaaag cgacttcacc tcggcggcga acttcgaatc
     2041 ggcctcggcc tcggcgccct tctgctgcat ttcgccgacc tgccggtgca ccgcgtcggc
     2101 ggtctccttg cgctgctcct cggcggtctt gaccggctcg gcggccgtcg gctgcttggc
     2161 cgcgtcctg
//
LOCUS       DATIKR010000325         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_16701, whole genome shotgun sequence.
ACCESSION   DATIKR010000325 DATIKR010000000
VERSION     DATIKR010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16701"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /gene="tsaB"
                     /locus_tag="VLL76_05125"
     CDS             complement(<1..385)
                     /gene="tsaB"
                     /locus_tag="VLL76_05125"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HSV28913.1"
                     /translation="MKVLALDSATSACSAALWQDGTVRARRFAAMARGQSEVLVPMVA
                     EVMAEAGETFAGLDLLAVTVGPGAFTGIRIGLATARALALAAGLPLAGVSSMEAIAAA
                     IPAAERTGRTILVVMDSKRDEPWVQA"
     gene            455..1024
                     /gene="ddpX"
                     /locus_tag="VLL76_05130"
     CDS             455..1024
                     /gene="ddpX"
                     /locus_tag="VLL76_05130"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HSV28914.1"
                     /translation="MFPLVRIEADAFGVEIALAYATPDNFTGKPVYRAGAGCFLHADA
                     ATRLARAVELARPLGLRLRILDAFRPAEAQWVLWNHTPDPGFLADPRVGSPHSMGAAV
                     DLTLVDAAGGRALDMGTDFDAFTPLSHHGNGAIPPEAQRNRLLLMGLMTTAGWDFYAN
                     EWWHYQLFDARARHPVLGDSVLGAERMMA"
     gene            1253..1492
                     /locus_tag="VLL76_05135"
     CDS             1253..1492
                     /locus_tag="VLL76_05135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28915.1"
                     /translation="MIQNACKPAAAPSEARGASSAFAMGLRMNRSADFLGNAEPGLDE
                     MMADEVIRRVMARDGVAADQLLSMLDRVRHNLGST"
BASE COUNT          237 a          547 c          524 g          253 t
ORIGIN      
        1 acgcctggac ccacggctcg tcgcgcttgg aatccatcac caccaggatg gtgcggccgg
       61 tgcgctcggc cgcgggaatg gcggcggcaa tggcctccat gctcgacacc ccggccagcg
      121 gcagccccgc cgccagcgcc agggcacggg cggtggcgag gccgatgcgg atgccggtga
      181 aggcgccggg gccgacggtg accgccagca ggtcgagccc ggcgaaggtc tcgcccgcct
      241 cggccatcac ctcggccacc atgggcacca gcacctcgga ctggccgcgg gccatggcgg
      301 cgaagcggcg cgcccgcacg gtgccgtcct gccacagggc ggcggagcag gcggaggtgg
      361 cgctgtcgag ggcaagaacc ttcatattgg gaccgatcgt cgcagtgggg gcgctatact
      421 gccgccgccg gacccggctt gcaaaggagg aagcatgttc ccgttggtgc gcatcgaggc
      481 cgacgcattc ggggtcgaga tcgccctggc ctatgccacg cccgacaact tcaccggcaa
      541 gcccgtctat cgcgccggcg ccggctgttt cctgcatgcc gacgccgcca cgcggctggc
      601 ccgcgccgtc gaactggccc gcccgctggg cctgcggctg cgcatcctgg acgccttccg
      661 cccggccgag gcgcaatggg tgctgtggaa ccacaccccc gatcccggct tcctggccga
      721 tccccgcgtc ggctcgcccc attccatggg cgcggcggtg gacctgaccc tggtggacgc
      781 cgccggcggg cgggcgctcg acatgggcac ggatttcgac gccttcacgc cgctgtcgca
      841 ccacggcaat ggcgccatcc cgcccgaggc gcagcgcaac cgcctgctgc tgatgggcct
      901 gatgaccacc gccggctggg acttctatgc caacgagtgg tggcactacc aattgttcga
      961 cgcccgcgcc cgccaccccg tgctgggcga ttccgtgctg ggcgccgagc gcatgatggc
     1021 ctgactcccc tacccctttt tttccgccgg cctcttgtct ggcgcggggc ggggcgccat
     1081 atggcttgca tccttcttac aagactttct gatgttgcgg cgcgtcaatc tgcttcgcgt
     1141 tgcaatacca gtaaaatgcg atgcaaatcg atacttaaga gggatcgaca tcgacgcatc
     1201 gttttgctgt atagtcgtct ttggaacgag gtcgaacagg aagggggcgc cgatgattca
     1261 gaatgcctgc aagcccgccg ccgcgccgtc cgaggcgagg ggggcgtcgt ccgctttcgc
     1321 catgggcctg cgcatgaacc gttcggccga cttcctgggc aatgccgagc ccggcctcga
     1381 cgagatgatg gcggacgagg tgatccgccg cgtcatggcg cgcgacggcg tcgccgccga
     1441 ccagcttctg tcgatgctgg accgcgtgcg ccacaacttg ggctcgactt gagtcaacct
     1501 cgtcatcccc gcgaaagcgg ggagatggac tcacatttca agcgcgacac cgaggttcac
     1561 g
//
LOCUS       DATIKR010000326         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_41775, whole genome shotgun sequence.
ACCESSION   DATIKR010000326 DATIKR010000000
VERSION     DATIKR010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41775"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VLL76_05140"
     CDS             <1..592
                     /locus_tag="VLL76_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV28916.1"
                     /translation="EYFGKLNKRQHEYAKGITEAGQALQTLVSDILDLAAIEAGQMTL
                     ELDSVDIHPLLSSVLALVRERVREKKVTLDFDCPIEIGWIVGDERRLKQVLFNLVGNA
                     VKYTPAGGTVTVRAERAGGELVLVVGDSGPGIPAAEQARLFDSFVSFTHGDTQGGPGL
                     GLALVRRFVELHGGRVELKSAKGEGTWVTIRLPAGA"
     gene            complement(692..>2248)
                     /locus_tag="VLL76_05145"
     CDS             complement(692..>2248)
                     /locus_tag="VLL76_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV28917.1"
                     /translation="MGGTTGKPIPFPPLKLHDDHGNPNHKNVSSYCALSGTTVNIADA
                     YDVDKFDFSGTKAFDAKTGYRSMSFLTVPLKNYEGEVIGVLQLINARDKKNNVIAFGP
                     DITPLIEALASQAAVALDNQRLIEAQKHLFKSFIQVIAGAIDAKSPYTGGHCNRVPTL
                     TAMLAKAACEKTDGPFSGFMLTDEEWYELEVAAGLHDCGKVTTPEYIVDKATKLETIY
                     NRIHEVRMRFEVKKRDAVIDYLQAVLAGEDDADALKAGLDDTLARLDDDFGFVAECNV
                     GGEFMAQERVDRLKGIAQMTWTRTIDDTLGLSIDEMKRRTGDEPKPPVEEPMLADKDW
                     HVIPHDTPIDYARYDAEGIKIKPCENKYNLGEIYNLCIGRGTLSAEDRFKIQEHIIQT
                     IFMLKALPFPKNLTRVPEWAGGHHEMMNGKGYPKGLTRDDMSWPARMMAIADIFEALT
                     AADRPYKKPKTLSEAIKIMSFMVKDQHIDPELWELFLTSGVWKHYAEQFLRPDQLDEV
                     DIGQYLKKAE"
BASE COUNT          355 a          696 c          763 g          434 t
ORIGIN      
        1 cgagtatttc ggcaagctca acaagcgcca gcacgaatac gccaagggca tcaccgaggc
       61 gggccaggcg ctgcagacgc tggtgtccga catcctggac ctcgccgcca tcgaggccgg
      121 ccagatgacg ctggaactgg acagtgtgga catccaccca ctgctgtcgt cggtgctggc
      181 attggtgcgc gagcgcgtgc gggaaaagaa ggtcacgctg gacttcgact gccccatcga
      241 aatcggctgg atcgtcggcg acgaacgccg gctcaagcag gtgctgttca acctggtggg
      301 caacgccgtg aaatacaccc cggccggcgg caccgtcacc gtgcgggccg aacgcgccgg
      361 cggcgagttg gtgctggtgg tgggcgactc gggccccggc atccccgccg ccgagcaggc
      421 ccgcctgttc gacagcttcg tcagcttcac ccacggcgac acccaaggcg gccccggcct
      481 gggcctggcc ctggtgcgcc gcttcgtcga actgcatggc ggccgggtcg aactgaaaag
      541 cgccaagggc gagggcacct gggtgacgat caggctgccg gcgggggcgt agaaaaccgt
      601 caccccggcc aagcgaagcg cgagccgggg tccatcgtgg tgcacttcca tggatcccgg
      661 gtctcgcgat gctcgcccgg gatgacgaaa actactccgc cttcttcaga tactgcccga
      721 tgtcgacctc gtcgagctgg tcggggcgca ggaattgctc ggcgtagtgc ttccacacgc
      781 ccgaggtcag gaacaattcc cacaattccg ggtcgatgtg ctggtccttg accatgaagg
      841 acatgatctt gatcgcttcc gacagggtct tgggcttctt gtaggggcgg tcggccgccg
      901 tcagcgcctc gaagatgtcg gcgatggcca tcatgcgggc gggccacgac atgtcgtcgc
      961 gggtcaggcc cttgggatag cccttgccgt tcatcatctc gtggtggccg ccggcccatt
     1021 ccggcacccg ggtcaggttc ttcgggaagg gcagcgcctt cagcatgaag atggtctgga
     1081 tgatgtgttc ctggatcttg aagcgatcct cggccgacag ggtgccgcgg ccgatgcaca
     1141 ggttgtagat ctcacccaga ttgtacttgt tctcgcacgg cttgatcttg atgccctcgg
     1201 cgtcgtagcg ggcatagtcg atgggcgtgt cgtgcgggat gacgtgccag tccttgtccg
     1261 ccagcatggg ttcctcgacc ggcggcttgg gctcgtcgcc ggtgcggcgc ttcatctcgt
     1321 cgatggacag gcccagggtg tcgtcgatgg tgcgcgtcca ggtcatctgc gcgatgccct
     1381 tgaggcggtc gactcgctcc tgcgccatga actcgccgcc aacgttgcat tcggcgacga
     1441 agccgaagtc gtcgtcgagg cgggccaggg tgtcgtccag cccggccttc agcgcatcgg
     1501 cgtcgtcctc accggccagc acggcctgta aatagtcgat caccgcgtcg cgcttcttga
     1561 cctcgaaccg catccgcacc tcgtggatgc ggttgtagat ggtctcgagc ttggtcgcct
     1621 tgtcgacgat gtattccggg gtggtgacct tgccgcaatc gtgcaggccg gcggcgacct
     1681 cgagctcgta ccattcctcg tcggtcagca tgaagcccga gaacgggccg tcggtcttct
     1741 cgcaggcggc cttggccagc atggcggtca gggtgggcac gcggttgcag tggccgccgg
     1801 tatagggcga cttggcgtcg atggcgccgg cgatgacctg gatgaagctc ttgaacaggt
     1861 gcttctgggc ctcgatcagg cgctggttgt cgagcgccac cgccgcctgc gaggccagcg
     1921 cctcgatcag cggggtgatg tcggggccga aggcgatgac gttgttcttc ttgtcgcggg
     1981 cgttgatcag ctgcaagacg ccaatcacct cgccctcgta attcttcagc ggcaccgtca
     2041 ggaacgacat cgagcgatag ccggtcttgg cgtcgaaagc cttggtgccc gaaaagtcga
     2101 acttgtccac gtcgtaggcg tcggcgatgt tcaccgtggt gcccgacagc gcgcaatagc
     2161 tggacacgtt cttgtggttg gggttgccgt ggtcgtcatg cagcttgagc ggcgggaacg
     2221 ggatcggctt gccggtggtg ccgcccat
//
LOCUS       DATIKR010000327         2346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_65742, whole genome shotgun sequence.
ACCESSION   DATIKR010000327 DATIKR010000000
VERSION     DATIKR010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65742"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /locus_tag="VLL76_05150"
     CDS             <1..1121
                     /locus_tag="VLL76_05150"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV28918.1"
                     /translation="GEFGAEVIKIEQPGGDAFRHFGSPTERDGDTCMWLSEARNKTSV
                     TLDLHRPEGQELFKRLVAGADVVCENFRPGTLEEWGLGWEQLRAINPRLILLRISGYG
                     QTGPYADRASFARIAHAFGGLSYLAGMPGGIPVTPGSTSLADYLSGLYGAIGVLTALR
                     HRDATGEGQMVDLALYESIFRVLDELAPAYAMFGKVREREGAGTVNACPHGHFRCADG
                     KWVALACTTDRMFEHLCRAMGKPELATPEKWGHLPDRLRDREQVDGLVSVWCGARKAH
                     EVIALCLEFDVPVSVLNSIADIFEDPQFKARETLLPVEEPGLGTVVVPGIIPKLSATP
                     GRVKNLGPRLGDGNNWVYGELLGLSAEERSRLKDAGVI"
     gene            complement(1099..1692)
                     /locus_tag="VLL76_05155"
     CDS             complement(1099..1692)
                     /locus_tag="VLL76_05155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28919.1"
                     /translation="MDNSAIDWRDHPVVYRINAADVIVYVNDAWRDFARHNGDADLAD
                     RAIGQSLWALITDPTLVRLYRDLVAAVRQSRRVLSFSYRCDSPDEKRELVMTIRPLLD
                     EVEFENRFVAIEPQSPRAFFDRFVRGDRQAVSICSICQKLAADDHWLDPIEAFHSGAV
                     HLDDTPLVLSPTVCPACEGDLEALAGGAVGPKLPRHP"
     gene            complement(1752..2258)
                     /locus_tag="VLL76_05160"
     CDS             complement(1752..2258)
                     /locus_tag="VLL76_05160"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV28920.1"
                     /translation="MDQPTELSLIRLAPEPQCGHDVALRLAGDIAELLNFDEGLPKEL
                     RHPPDAPLETAESVLSFTREWCLPRNAIFHAIVVGGRAIGSISLSHVDTVEGTARSGY
                     WLGSAHQGRGYATQALGTLVAIARESGLARLSATIPADNERSRRVWEKLGAVVDSDGG
                     KLTAMIAL"
BASE COUNT          385 a          800 c          784 g          377 t
ORIGIN      
        1 tgggcgagtt cggcgccgag gtgatcaaga tcgagcagcc gggcggcgac gcgttccgcc
       61 atttcggcag ccccaccgag cgcgacggcg acacctgcat gtggctgtcg gaagcccgca
      121 acaagacctc ggtgacgctg gacctgcacc gccccgaagg ccaggagctg ttcaagcggc
      181 tggtcgccgg cgccgacgtg gtgtgcgaga acttccgtcc cggcacgctg gaggaatggg
      241 gcctgggctg ggagcagttg cgcgccatca acccccgcct gatcctgctg cgcatctcgg
      301 gctatggcca gacaggaccc tatgccgacc gcgccagctt cgcccgcatc gcccacgcct
      361 tcggcggcct gtcctatctg gccggcatgc ccggcggcat cccggtgact cccggttcga
      421 cctcgctggc cgattacctg tcgggcctgt acggcgccat cggcgtgctg acggcgctgc
      481 gccaccgcga cgccaccggc gaaggccaga tggtcgacct cgccctctat gaatccatct
      541 tccgcgtgct cgacgaactg gcccccgcct acgccatgtt cggcaaggtg cgcgagcgcg
      601 agggcgccgg caccgtcaac gcctgcccgc acggccattt ccgctgcgcc gacggcaagt
      661 gggtggcgct ggcctgcacc accgaccgca tgttcgagca tctgtgccgc gccatgggca
      721 agcccgagct ggcgaccccg gaaaagtggg gccacctgcc cgaccgcctg cgcgaccgcg
      781 agcaggtgga cggactggtc agcgtgtggt gcggcgcccg caaggcgcac gaggtcatcg
      841 ccctgtgcct ggaattcgac gtccccgtgt cggtgctgaa ctccatcgcc gacatcttcg
      901 aggacccgca attcaaggcc cgcgaaaccc tgctgccggt cgaggaaccg ggcctgggca
      961 ccgtggtggt gcccggaatc attcccaagc tgtcggccac ccccggccgc gtcaagaacc
     1021 tgggcccacg cctgggcgac ggcaacaact gggtctatgg cgaactgctg ggactgtcgg
     1081 ccgaggaaag gtcgaggctc aaggatgccg gggtaattta ggacctaccg cgccgcccgc
     1141 cagcgcctca aggtccccct cgcaggccgg gcacacggtc gggctgagga ccagcggggt
     1201 gtcgtcgagg tggacggcac cgctgtgaaa ggcctcgatg gggtccagcc agtggtcgtc
     1261 ggccgccagc ttctggcaga tgctgcagat ggacaccgcc tggcggtcgc cccggacgaa
     1321 gcggtcgaag aaggcccggg gcgattgcgg ctcgatggcg acgaagcggt tctcgaactc
     1381 gacttcgtcc agcagcggcc ggatcgtcat caccaattcc cgcttttcgt cgggcgaatc
     1441 gcagcggtac gagaaactga gcacccgccg gctctggcgc acggcggcga ccaggtcgcg
     1501 atagaggcgg accagggtgg gatcggtgat cagcgcccac agcgactggc caatggcccg
     1561 gtcggccaga tcggcgtcgc cgttgtggcg cgcgaagtcc cgccaggcgt cgttgacata
     1621 gacgatgacg tcggccgcat tgatgcggta gaccaccgga tggtcacgcc aatcgatcgc
     1681 ggagttgtcc atcgtctccc cccaggtggt tgatgatgaa acaagtcctg gggcgaatca
     1741 accgcgacgc gtcaaagcgc gatcatcgcc gtcagcttgc cgccgtcact gtcaacgacg
     1801 gcccccagct tctcccaaac ccgcctcgag cgttcattgt cggctggaat cgtggcggac
     1861 agccgcgcca gcccgctttc ccgggcgatg gcgaccaggg tccccaaggc ctgtgtcgca
     1921 tacccccggc cctgatgggc actgcccagc caatagccgc tgcgggcggt tccctccacg
     1981 gtatcgacgt ggctcaagct gatcgacccg atggccctgc ccccgacgac gatggcatgg
     2041 aatatggcgt tccgcggcag gcaccattcc ctggtgaagg acagcaccga ttccgcggtt
     2101 tccaatggag catccggcgg gtgccgaagc tctttgggaa gcccttcgtc gaaattcagc
     2161 aactcggcga tgtccccggc aagccgcaac gcgacgtcgt gcccgcattg cggttcgggg
     2221 gcaagccgga tcaggctgag ttcggtgggt tggtccatga tttcccctcc acgacgacgg
     2281 ccgcgtaacg tgatttgttg gcggcggcct cagtatttgg cgtcgctggc gatatggccg
     2341 gcggag
//
LOCUS       DATIKR010000328         2987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_16774, whole genome shotgun sequence.
ACCESSION   DATIKR010000328 DATIKR010000000
VERSION     DATIKR010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16774"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VLL76_05165"
     CDS             <1..512
                     /locus_tag="VLL76_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2270 domain-containing protein"
                     /protein_id="HSV28921.1"
                     /translation="PLVLVGLLVTVFLAIEARRYRFFDFWRIRAHILEVNFFGPILLG
                     HGLRFENHWNEILYRDYIQPRLHITFHEAVGRRLRRNYGWIFLIQLIAYAGKLVIHPV
                     AADSMDTILARAAIGPVPGELVLLAGVFFHGTWMTIAFLTLRSRRGADRPRPKRPLSD
                     AVLDLAREK"
     gene            complement(475..1794)
                     /locus_tag="VLL76_05170"
     CDS             complement(475..1794)
                     /locus_tag="VLL76_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV28922.1"
                     /translation="MTQAPRPVASLTIRLVAAALVWLAVLLALGGVVLAQAFRQSVEQ
                     EFGHRLDALLRAVVAATEIAPDGSVTMTRPLGDPRFDQIFSGWYWQVSPSHGRPARSR
                     SLWDATLPAHQGPHLAGPADEPLMVAERDVEFPGAGKVHVLVAGDLREVLAETRKFDT
                     LLMAAMGLLGLGMALAVVIQVRFGLRPLRRMEQDLEAVRRGEQARLAGSYPQEVAPLA
                     EAMNGVLDHDQVLIERARTHVGNLAHSLKTPLSVLQAEMHAGPDPTVVRDQVQSMTRL
                     VEYHLGRAAAVAGAGRALGTQVPVAAVAADLARVLGRIHPDKAIRLDVAEDTVFRGQR
                     EDLEEILGNLADNAAKWARSTIRIAGRDSVLTVEDDGPGLSPEQAEAAAGRGARLDER
                     VPGWGLGLAIVTDLVAINGGTAEFGRSDLGGLKVVVTFPAPNPAPRR"
     gene            complement(1791..2447)
                     /locus_tag="VLL76_05175"
     CDS             complement(1791..2447)
                     /locus_tag="VLL76_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV28923.1"
                     /translation="MRVLVVEDEPALALRLQQTLEAAGFAVDTAYDGEDGWHLGDTES
                     YDAVVLDLGLPKLDGISVLKRWREAGRAMPVLILTARGRWSEKMAGFDAGADDYVTKP
                     FEMDEVVYRLRALIRRAAGHAQPELACGPVRLDTHGGRVTVDGMAIQLTAQEFRILSY
                     LMHHPGKVVSRTELLEHVYDRHFDSDSNVVEVLVGRIRKKLGVDVIRTLRGQGYSIQP
                     "
     gene            complement(2447..2746)
                     /locus_tag="VLL76_05180"
     CDS             complement(2447..2746)
                     /locus_tag="VLL76_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HSV28924.1"
                     /translation="MKKLIIPVALSMILALPALAGEREHDRARKALEAGEVLPLKTIL
                     DRAEAVQPGQLLEAELEDEHGGLVYELKLLTPDGKVSKLLFDARTGELLKRKDGR"
BASE COUNT          438 a         1053 c         1027 g          469 t
ORIGIN      
        1 tgccgctggt gctggtgggg ctgctggtca cggtgttcct ggcgatcgag gcgcggcgct
       61 accgcttctt cgacttctgg cgcatccgcg cccatatcct ggaggtcaac ttcttcggcc
      121 ccatcctgct gggccacggg ctgcggttcg agaaccactg gaacgagatc ctgtatcgcg
      181 actacatcca gccccgcctg cacatcacct tccacgaggc ggtggggcgg cggttgcggc
      241 gcaattacgg ctggatcttc ctgatccagt tgatcgccta cgccggcaag ctggtgatcc
      301 acccggtggc cgccgacagc atggacacca tcctggcccg cgccgccatc gggccggtgc
      361 cgggcgaact ggtgctgctg gcgggggtgt tcttccacgg cacctggatg accatcgcct
      421 tcctgacgct gcgcagccgg cgcggcgccg accggccccg gcccaagcgg ccgctcagcg
      481 acgcggtgct ggatttggcg cgggaaaagt gacgacgacc ttcaggccgc ccaggtccga
      541 gcggccgaat tcggcggtgc cgccgttgat ggcgaccaga tcggtgacga tggcgaggcc
      601 caggccccag ccggggaccc gctcgtccaa ccgggcgccg cgtccagccg ccgcttcggc
      661 ctgctcgggc gacaggccgg ggccgtcgtc ctcgaccgtc agcacgctgt cccgacccgc
      721 tatgcggatg gtcgagcgcg cccatttggc ggcgttgtcg gcgaggttgc cgaggatctc
      781 ctcaagatcc tcgcgctggc cgcggaacac ggtatcctcg gccacgtcca gccggatggc
      841 cttgtcgggg tggatgcgcc cgagcacgcg ggcgaggtcg gcggcgaccg ccgccacggg
      901 cacctgggtg cccagggcgc ggccggctcc agccacggcg gcggcgcggc cgagatggta
      961 ttccaccagc cgggtcatgg actgcacctg gtcgcgcacc accgtcgggt cggggccggc
     1021 atgcatctcg gcctgcagca cggacagcgg agtcttcagg ctgtgggcca ggttgcccac
     1081 atgggtgcgg gcgcgttcga tcagcacctg gtcgtggtcg agcacgccgt tcatggcctc
     1141 ggccagcggc gccacctcct gcggatagct gccggccagc cgcgcctgct cgccccggcg
     1201 caccgcttcc aggtcctgct ccatccggcg cagcgggcgc aggccgaagc ggacctggat
     1261 caccaccgcc agggccatgc ctaggcccaa caggcccatc gccgccatca gcagggtgtc
     1321 gaacttgcgg gtttccgcca acacttcgcg caggtcgccg gccaccaaaa catgcacctt
     1381 gccggcgccg ggaaattcca cgtcgcgctc ggccaccatc agcggctcgt ccgccggtcc
     1441 cgccagatgc ggtccttggt gggcgggcag cgtggcatcc cacagcgagc gcgaccgcgc
     1501 cgggcgcccg tgggacggcg acacctgcca gtaccagccg gaaaagatct ggtcgaagcg
     1561 gggatcgccc agcggacggg tcatggtgac ggagccgtcc ggggcgatct cggtggcggc
     1621 gaccacggcg cgcagcaggg cgtcgaggcg gtggccgaat tcctgttcga cgctttggcg
     1681 gaaggcctgg gccagcacca cgccgcccaa ggccagcagg accgccagcc acaccagtgc
     1741 cgccgccacc aggcggatgg tcagcgaggc gacggggcgg ggcgcttgcg tcatggctgg
     1801 atgctgtagc cctggccgcg cagcgttcgg atgacgtcca cccccagctt cttgcggatg
     1861 cgtccgacca gcacctcgac cacgttggag tcgctgtcga aatggcggtc gtagacgtgt
     1921 tccagcaatt cggtgcggct gaccaccttg ccggggtggt gcatcagata ggacaggatg
     1981 cggaattcct gggcggtcag ttggatcgcc atgccgtcca cggtgacgcg gccgccatgg
     2041 gtgtccaggc gcaccgggcc gcaggccagt tccggctggg catggccggc ggcgcggcgg
     2101 atcagggcgc gcaggcgata gaccacctcg tccatctcga acggcttggt gacgtagtcg
     2161 tcggcgccgg catcgaaccc cgccatcttc tcggaccacc ggccgcgcgc ggtcaggatc
     2221 agcaccggca tggcgcgccc ggcctcgcgc cagcgcttca gcacgctgat accgtccagc
     2281 ttgggcaggc ccaggtccag caccaccgcg tcatagcttt cggtgtcgcc cagatgccag
     2341 ccgtcctcgc cgtcataggc ggtgtcgacg gcgaaaccgg ccgcttccag cgtctgttgc
     2401 agacgcaggg caagggccgg ttcgtcctcg accaccagca cgcgcatcag cgcccgtcct
     2461 tccgtttcag cagctcgccg gtacgggcgt cgaacagcag cttcgacacc ttgccgtcgg
     2521 gcgtcagcag cttgagttca tagaccagcc cgccgtgctc gtcctccagc tcggcctcca
     2581 gcaactggcc gggctgcacc gcctcggcac ggtccaggat ggtcttgagc ggcaggactt
     2641 cgccggcctc cagcgccttg cgggcgcggt cgtgctcgcg ctcgccggcc aaggcgggca
     2701 gggccaggat catcgacagg gcaacgggta tgatcagctt tttcatgcaa cgaccctagt
     2761 gccgcctggc tgaaccgacg atgaacgagc gtgtcagctt cggttcagct tgtcttttat
     2821 agcatggcct caattcggaa cccgaggagg atcccatgct tcgaaaaatg atcctgcagg
     2881 ccgtggtggc cgccgtcctg atcggcggcg cggcggcggt gtatgcgcag gtcggtcccg
     2941 cgccccaggt cgccgccggc gaccatgacg gcgaccacag cgaccgc
//
LOCUS       DATIKR010000329         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_150602, whole genome shotgun sequence.
ACCESSION   DATIKR010000329 DATIKR010000000
VERSION     DATIKR010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150602"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VLL76_05185"
     CDS             complement(<1..512)
                     /locus_tag="VLL76_05185"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV28925.1"
                     /translation="MIPHASTRRTRVAVIDGNVGRRMEADRMLSPFYEVSLYGSGQQA
                     LDEMAAEPPAVVLVDELTPPMGGPAFLRALRRSPKLAPVPAVCVSSHGGQPAEAAARE
                     AGADAFFVRPLKSGPLVTELARLSTRAVEAQWQSLPERQREALRRTVDTFNEISDLID
                     QGRPLDFAKVG"
     gene            complement(509..1258)
                     /locus_tag="VLL76_05190"
     CDS             complement(509..1258)
                     /locus_tag="VLL76_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28926.1"
                     /translation="MTFDDNTPTPANGDSGAQAQAGAARDNAFAPHPAGHYCQGMART
                     VLQAASALLIKNSENGVIAIDKARTLLRQLGEAEPDLVRIYAGQEDKCRRQLWRRFDS
                     SARKDPFRRLMTRPLEVLLEGQPPAFQRASLANYFKVLQNVYAEHFEEYEAQCRAVLH
                     ALLVVHGQALTWEEFYADPRTQRILSHALRRLITFLDTPAGQWLWIEVMSQGDGHSKA
                     PSSAEADQVLQALHDTWRGLELAHPPSESRR"
     gene            complement(1342..>2021)
                     /locus_tag="VLL76_05195"
     CDS             complement(1342..>2021)
                     /locus_tag="VLL76_05195"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV28927.1"
                     /translation="LARAASDLGVGLGPFAEGMPQGVAPIYVAEPSPDSVLTGLMPPF
                     SGFVDSGADIHASRCLDAVGKGGICLSLTTAAAYAIDPTPMLGDIVRRRFGAPEPVAQ
                     LIELGLAEALGNAIIHGNLGIDSDMRATFDGFTQFSRLMAERLEDPVLASRRVEVTLV
                     LDASEGLTVAVSDQGQGFDIQRELSKPVESGAKSGRGLALIRKMAKAVAGADSGRTLV
                     MTFALAG"
BASE COUNT          305 a          709 c          710 g          297 t
ORIGIN      
        1 ccgaccttgg cgaaatccag cggccggccc tggtcgatca ggtccgagat ctcgttgaag
       61 gtgtccaccg tgcggcgcag ggcctcgcgc tggcgctcgg gcagggactg ccattgcgct
      121 tccaccgccc gggtcgacag ccgcgccagt tcggtcacca gcggcccgct tttcaacgga
      181 cggacgaaga aggcgtcggc cccggcctcg cgcgccgccg cctcggcggg ctggccgcca
      241 tgcgacgaca cgcacaccgc cggcaccggc gccagtttcg gcgagcggcg cagcgcccgc
      301 aggaaggccg gcccgcccat gggcggcgtc agctcgtcca ccagcaccac cgccggcggc
      361 tccgccgcca tctcgtcaag cgcctgctgg ccgctgccgt acaggctgac ctcgtagaac
      421 ggcgacagca tgcggtcggc ctccatgcgg cggccgacat tgccgtcgat cacggcgacg
      481 cgggtgcgcc tggtcgatgc atgggggatc atcgccggga ctccgagggc ggatgggcca
      541 gctcgagtcc ccgccaggtg tcatgcagcg cctgcagcac ctggtcggcc tcggccgagc
      601 tgggcgcctt gctgtggccg tcgccctggg acattacctc gatccacagc cattgcccgg
      661 ccggggtgtc gaggaaggtg atcagccggc gcagggcgtg cgacaggatg cgctgggtgc
      721 gcgggtcggc atagaattcc tcccaggtca gggcctggcc gtggaccacc agcaaggcat
      781 ggagcacggc gcggcattgc gcctcgtatt cctcgaaatg ctcggcgtag acgttctgca
      841 gcaccttgaa ataattggcc aggctggcgc gctggaacgc cggcggctgg ccttccagca
      901 gcacctccag cggccgcgtc atcaggcggc ggaacgggtc cttgcgggcc gaggaatcga
      961 accggcgcca caattgccgc cggcacttgt cctcctggcc ggcatagatg cgcaccaggt
     1021 cgggttcggc ctcgcccaac tggcgcagaa gggtgcgggc cttgtcgatg gcgatcacgc
     1081 cgttctcgga attcttgatc agcagcgccg aggcggcctg cagcacggtg cgcgccatgc
     1141 cctggcagta atggccggcc ggatgggggg cgaacgcgtt gtcccgggcg gcaccggctt
     1201 gcgcttgcgc gccgctgtca ccgttggcgg gggttggggt attgtcatcg aacgtcatgg
     1261 ctcgcctcgc gcgaacaccg gacgaaacaa ttatactccc cctgccgggc accggggagt
     1321 cgcattccgg atggaggccg gtcaaccggc gagggcgaag gtcatcacca atgtgcggcc
     1381 cgaatccgcc cccgccaccg ctttcgccat cttgcggatc agcgccaagc cacgcccgct
     1441 tttggcgccc gattccaccg gcttggacag ctcgcgctgg atgtcgaagc cctggccctg
     1501 gtccgacacg gcgacggtca gcccctcgga cgcgtccagc accagcgtca cttcgacgcg
     1561 acgcgacgcc agcacggggt cctcgagccg ttcggccatc agccgcgaga attgcgtgaa
     1621 gccgtcgaag gtggcccgca tgtcgctgtc gatgcccaga ttgccgtgga tgatggcgtt
     1681 gcccaacgcc tcggccaggc cgagttcgat cagttgcgcc accggctcgg gagcgccgaa
     1741 gcgccgccgc acgatgtcgc ccagcatggg ggtggggtcg atggcgtagg cggccgccgt
     1801 ggtcagcgac aggcagatcc cgcccttgcc gaccgcgtcg aggcagcgcg acgcatggat
     1861 gtcggcgccc gaatcgacga agcccgagaa cggcggcatc agtccggtca gcacgctgtc
     1921 gggcgacggc tcggccacgt agatgggggc gacgccctgg ggcatgccct cggcgaacgg
     1981 ccccaagccc acgcccaggt ccgaggcggc gcgcgccagg g
//
LOCUS       DATIKR010000330         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_138608, whole genome shotgun sequence.
ACCESSION   DATIKR010000330 DATIKR010000000
VERSION     DATIKR010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138608"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VLL76_05200"
     CDS             complement(<1..368)
                     /locus_tag="VLL76_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28928.1"
                     /translation="MKRLLALALLLPLAGAARAAESAHWAKVAADIGAVIAQAEAQAV
                     AGNPDEAKKTVTQAYFGVFESSKMEAAIRKEIGAKPAYEREKLFADLRKAITKGDSAV
                     IRQIAAALRTGLAEDGKALD"
     gene            complement(370..891)
                     /locus_tag="VLL76_05205"
     CDS             complement(370..891)
                     /locus_tag="VLL76_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008383040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HSV28929.1"
                     /translation="MKKLVAAAALAALVAAPALAGEQPIGEPVEKNGMEIAGVYLQAV
                     QMEPVHAHHGGTDIHIEADIKAIKGNNNGFGEGEWVPYLDIDYTLTKPGSSWKKTGKL
                     VPMVASDGPHYGDNIKMDGAGKYHVVYKVSPGAHGFLRHTDKETGVGKWWEPFTVEWD
                     FTYVGSAGKKGGY"
     gene            1076..1417
                     /locus_tag="VLL76_05210"
     CDS             1076..1417
                     /locus_tag="VLL76_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28930.1"
                     /translation="MDLDGRELVWLAVLGCVARGPVVLGQVLAHVEHEVGHWTEAAAV
                     SRYLHEMARGGHIVLACDGRRWMVSTGPKGGQTLARLMGLSPDPNSPSLRRAFQRLRR
                     MVGIWRQSYAV"
     gene            1537..1890
                     /locus_tag="VLL76_05215"
     CDS             1537..1890
                     /locus_tag="VLL76_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HSV28931.1"
                     /translation="MKIDGFEQFIAMGKDNAEAMVKAGNVAMKGFEELQKAWQSAAAR
                     SVEKTDAAVKAMASCKSPVEIAEIQSKLARESVETAIVETRKFAELSQSVFTAALEPL
                     NARMSAFQALAKSAA"
BASE COUNT          323 a          654 c          690 g          408 t
ORIGIN      
        1 ttgtcgagcg ccttgccgtc ctcggccagg ccggtgcgca gggcggcggc aatctggcgg
       61 atgacggcgg aatcgccctt ggtgatggcc ttgcgcaggt cggcaaacag cttttcgcgt
      121 tcataggccg gcttggcgcc gatctccttg cggatcgcgg cttccatctt cgagctttcg
      181 aacacgccga aataggcctg ggtgacggtc ttcttggctt cgtcgggatt gccggccacg
      241 gcctgtgcct cggcctgggc gatcaccgcc ccgatgtcgg cggcgacctt ggcccaatgg
      301 gcggactcgg ctgcccgcgc cgcacccgcg agcggcagca gcagggcgag ggcgagcagc
      361 cgcttcatct tagtaaccgc ccttcttgcc ggcgctgccg acataggtga agtcccattc
      421 cacggtgaac ggctcccacc acttgccgac gccggtttcc ttgtcggtgt ggcgcaggaa
      481 gccgtgggcg ccggggctga ccttgtagac cacgtggtac ttgccggcgc cgtccatctt
      541 gatgttgtcg ccgtaatggg ggccgtcgga cgccaccatg gggaccagct tgccggtctt
      601 cttccagctc gagcccggct tggtcagggt gtagtcgatg tcgagatagg ggacccactc
      661 gccttcgccg aagccgttgt tgttgccctt gatggccttg atgtcggcct cgatgtggat
      721 gtcggtgccg ccgtgatggg cgtggaccgg ctccatctgc accgcctgca gatagacgcc
      781 ggcgatctcc atgccgttct tctcgaccgg ctcgccgatg ggctgctcgc ccgccaaggc
      841 gggggcggcg acaagggccg ccagggcggc ggcggcgaca agcttcttca tctgtgatcc
      901 cctcgcaggt gttgcgaacg caaacgataa gcgttcgcaa gttggatttc cacaaattcg
      961 tacggggcaa tccggtgccc ctcatgcggc cggatcatgg cttaccccgt tcgatgttgc
     1021 aaatgaaaat gcgacgcgtt atcaacttct atcgttggac ggaggaggcg catccatgga
     1081 tctcgacggg cgtgaattgg tgtggctggc cgtgctgggc tgcgtcgcgc gcgggccggt
     1141 ggtgttgggc caggtgctgg cccatgtgga gcacgaggtc ggccactgga ccgaggcggc
     1201 ggcggtgtcg cgctatctgc acgagatggc gcggggcggc catatcgtgc tggcctgcga
     1261 cggccggcgc tggatggtct cgaccggccc caagggcggg cagacgctcg cccgcctgat
     1321 gggcctcagc cccgacccca actcgcccag cctgcgccgg gctttccagc ggttgcgccg
     1381 catggtcggc atatggcggc aatcctatgc cgtttgaccg tattgtgcag tgcacaaaaa
     1441 actcttgcgt catgctccgg atgcgctata ttcacatcat gttgcagtgc acaacgccat
     1501 cgtggcgatg ggcagacaag tcaagaggac cgcactatga agatcgatgg tttcgaacag
     1561 ttcatcgcca tgggtaagga caacgccgag gcgatggtca aggccggcaa cgtcgccatg
     1621 aagggcttcg aggagctgca gaaggcctgg cagtcggccg ccgcccgctc ggtcgagaag
     1681 accgacgccg ccgtcaaggc gatggcttcc tgcaagtcgc cggtcgagat cgccgagatc
     1741 cagtccaagc tggcccgcga gtcggttgag accgccatcg tcgagacccg caagttcgcc
     1801 gagctgtcgc agtcggtgtt caccgccgca ctcgagcccc tgaacgctcg catgagcgcg
     1861 ttccaggcgc tggccaagtc cgccgcttga gcccgcgtac atagccccga gtgcgtgggg
     1921 accgggcacc tcctcccgcc cggtcccctg catttgaggc ttgtgaaagc ccggcccccg
     1981 caaaggggcc gggtttttca ttggcactca gctttgtttt caagggtcgg aagcaccgtc
     2041 gctccaggtc cgttgtttat ctgtgtctga tatgc
//
LOCUS       DATIKR010000331         4182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_101903, whole genome shotgun sequence.
ACCESSION   DATIKR010000331 DATIKR010000000
VERSION     DATIKR010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4182
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101903"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..870)
                     /locus_tag="VLL76_05220"
     CDS             complement(<1..870)
                     /locus_tag="VLL76_05220"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HSV28932.1"
                     /translation="MKHLSIKLKVGAAFSIMLIVVFVLGVFSVSRISAVNDLTNEMGE
                     SWVPSVELTGAINTMATKFRVAEARHIMAQTDNELRAMEKLLDERGLEIRTLRAKYEP
                     LMSSVEERTLYNEFARAWDDYMAVHKKILVLSAAHDNAGAEALFAGESMRFYNLASSK
                     LDALVRLNHDGAQAANLRGDEIYVFARNLVVGALVVTVLMTVAMAGFLILNVSVPVAG
                     MTRVMARLSDNDFSVVIPATDRGDELGAMAQAVQVFKEKMEANRRMEAEVKESERRNA
                     EQRKRDMNHLADEF"
     gene            complement(938..1381)
                     /locus_tag="VLL76_05225"
     CDS             complement(938..1381)
                     /locus_tag="VLL76_05225"
                     /inference="COORDINATES: protein motif:HMM:TIGR00072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation protease"
                     /protein_id="HSV28933.1"
                     /translation="MKTLLIGIGHQYRGDDAVGPLVAGRIAAMNLPDLDVLAHHGEGT
                     DLMERWAGYDRVVVVDATCGGGEIGTIRRWDAVAAPLPAGLFPKGSHVFGLAEGVEMA
                     RLLGRLPAAMTVIGIEGELFSAGDVMSPQVEQASETVAGELISSS"
     gene            complement(1378..2043)
                     /locus_tag="VLL76_05230"
     CDS             complement(1378..2043)
                     /locus_tag="VLL76_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28934.1"
                     /translation="MMLTPIDHGRLLPLLPEFEAALAGDDLAVKVFQRVTALIPDGDL
                     MTLSTDPVHHAQAVELCRDWGFGIVEKRPQDYFTWDGQAVAVELEPSVLVHEIGHYQL
                     AAPERRNVIDFGLGAGPETGLKAEADAVQTLFLPERDVEEALCSLLGILWEAELGQPA
                     ILAFLEQNWMEGGASLHNVAHFRKIVRWLGEMGLIDGDGRPTRGLRQEGDDTFFARWF
                     ADS"
     gene            complement(2261..4117)
                     /gene="cysC"
                     /locus_tag="VLL76_05235"
     CDS             complement(2261..4117)
                     /gene="cysC"
                     /locus_tag="VLL76_05235"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HSV28935.1"
                     /translation="MSKNPLSIVVVGHVDHGKSTLVGRILNETGALPEGKVEYLREVC
                     AKRGMPFEWAFVMDALQAERDQGITIDTSRIRFETANRPYILIDAPGHKEFLKNMITG
                     AASAEAAVLVIDAHEGVQEQTRRHGYLLHLLGLEQIAVAVNKMDLVDWSEDRFRAVKA
                     EIEAYLAGIGVRPTHVVPVSARGGDNVATPSANSPWYKGPTVLGALDGFESHGTAVDL
                     GLRLPVQDVYKFDHRRIVAGRIESGRLKVGDKLVFAPSGTTARVATIEDWAGDHVTRV
                     AAEAGRSVAFTLDDQVFVERGQIAHLADDAPSLAHEIRARVFWLGKHAMGEGSKLKLK
                     LGTAEHQVEVKTVERVIDVHELVSKKGGEVCRNAVAEIVLKSRSPIAFDRFSANPRLG
                     RFVLVDGYEIVGGGVIAEGMSQVKSDNIFAVEHKVTPDSRVAANGHAGGVLWLTGLSG
                     AGKSTIAMELERRLFLKGWQVTVLDGDNVRHGLCSDLGFSPEDRTENIRRVGEVAHLF
                     AGAGMLVVTAFISPYRADRDRVRAMGPGFNEVYVATDLDECEKRDPKGLYKKARKGEI
                     PEFTGISAPYEAPVDPELTLETAGRSLDQTVAELMAYVEHEFGLANKVRRAG"
BASE COUNT          686 a         1392 c         1377 g          727 t
ORIGIN      
        1 gaactcgtcg gccaggtgat tcatgtcacg cttgcgctgc tcggcgttgc ggcgctcgga
       61 ttccttgacc tcggcctcca tgcggcggtt ggcctccatc ttctccttga agacctgcac
      121 cgcctgggcc atggcgccca attcgtcgcc ccggtcggtg gccgggatca cgaccgaaaa
      181 gtcgttgtcg gacagtcgcg ccatcacccg cgtcattccc gccaccggga ccgacacgtt
      241 gaggatcagg aagccggcca tggcgacggt catcagcacg gtgaccacca gggcgccaac
      301 caccagattg cgggcgaata catagatttc gtcgccgcgc aggttggcgg cctgggcgcc
      361 gtcgtggttg aggcggacca gggcgtccag cttcgacgag gcgagattgt agaagcgcat
      421 ggattccccg gcgaacaacg cctctgcccc ggcgttgtca tgggcggccg acaaaacgag
      481 gatctttttg tggacggcca tgtaatcgtc ccaggcgcgc gcgaactcgt tgtagagggt
      541 gcgctcttcc acgctggaca tcagcggctc gtacttggcg cgtagcgtgc ggatttccag
      601 gccacgttcg tccagcagct tctccatggc gcgcaattca ttgtcggtct gcgccatgat
      661 gtggcgggcc tcggccaccc ggaacttggt cgccatggtg ttgatggcgc cggtcaactc
      721 gacactgggc acccagcttt cgcccatttc gttggtcaag tcgttgacgg ccgagatgcg
      781 gctgaccgag aacacgccca agacgaagac cacgatcaac atgatcgaga aagctgcgcc
      841 gactttcaat ttgatggaaa gatgtttcat ggcccacctg acccattacg gaacggccag
      901 gataggcgga aatcgttaga aactgtttgg acttaggtca agacgaagaa attaattctc
      961 cagccactgt ctcggatgcc tgttcaactt gcggtgacat gacgtcgccc gccgagaata
     1021 gttcgccttc aatgccgatc acggtcatcg ccgccggcaa ccgccccaac agtcgcgcca
     1081 tctcgacgcc ttccgccagc ccaaagacat ggctgccctt ggggaacagg ccggcgggca
     1141 gcggcgccgc caccgcatcc caacggcgga tggtgccgat ttcgccgccg ccacaggtgg
     1201 cgtccaccac gaccacgcgg tcatagcccg cccagcgttc catcaaatcg gtgccctcgc
     1261 cgtggtgagc cagaacatcg aggtcgggaa ggttcatggc ggcgatccgc cccgccacca
     1321 gcgggccgac ggcatcgtcg ccgcgatact ggtggccgat gccgatcagc agcgtcttca
     1381 tgaatcggcg aaccagcggg cgaagaaggt gtcgtcgcct tcctggcgca gcccgcgcgt
     1441 cgggcggccg tcgccgtcga tcagccccat ctcgcccagc cagcgcacga tcttgcggaa
     1501 gtgggcgacg ttgtggaggc tggcgccgcc ctccatccag ttctgctcca ggaacgccag
     1561 gatggcgggc tggcccagtt cggcctccca caaaatcccc aacagcgagc acaatgcctc
     1621 ttccacgtcg cgctcgggca ggaacagggt ctggaccgcg tcggcctcgg ccttcagccc
     1681 ggtctcgggg ccggcgccca ggccgaaatc gatgacgttg cggcgttccg gcgcggccaa
     1741 ctggtaatgg ccgatctcgt gcaccagcac actgggctcc agctccaccg ccaccgcctg
     1801 gccgtcccag gtgaaatagt cctgcggccg cttctcgacg atgccgaagc cccagtcgcg
     1861 gcacaattcc accgcctggg cgtggtgcac cgggtcggtg gacagcgtca tcaggtcgcc
     1921 gtcggggatc agggcggtga cgcgctggaa caccttcacc gccaggtcgt caccggccaa
     1981 cgccgcctcg aattcgggca gcagcggcaa cagacggcca tggtcgatgg gggtcagcat
     2041 catgatgcgc gagttctagc gcagatcgat tttgatgtca tcccgaccga gcaggcacgg
     2101 gcggccgaca cctcggctga aagatccctc ggctgcgctc gggagacact ccctggtttg
     2161 tcatgctgag cgcagcgaag catctttcag gcatgggcgg ccgacacctc cgctgaaaga
     2221 tccctcggct gcgctcggga tgacactccc ttccaaccac tcaccccgcc cggcgcacct
     2281 tgttggccag gccgaactcg tgctccacat aggccatcaa ctcggccacc gtctggtcca
     2341 gcgaacggcc ggcggtttcc agggtcagtt cggggtccac cggggcctcg tagggcgccg
     2401 agatgccggt gaattccggg atctcgccct tgcgcgcctt cttgtagagg cccttggggt
     2461 cgcgcttttc gcactcgtcc aggtcggtgg cgacgtagac ctcgttgaag cccggcccca
     2521 tggcgcggac gcggtcgcgg tcggcgcggt aggggctgat gaaggcggtc accaccagca
     2581 tgccggcgcc ggcgaaaagg tgggcgacct cgccgacgcg gcggatgttt tcggtgcggt
     2641 cctcggggct gaagccgagg tccgagcaca ggccgtggcg gacgttgtcg ccgtccagca
     2701 cggtgacctg ccagcccttg aggaacagcc ggcgctcaag ctccatggcg atggtggact
     2761 tgccggcgcc cgacaggccg gtcagccaca gcacgccgcc ggcatggccg ttggcggcga
     2821 cacgcgagtc gggggtgacc ttgtgttcga cggcgaagat gttgtcggac ttcacctgcg
     2881 acatgccctc ggcgatgacg ccgccgccga cgatctcgta gccgtccacc agcacgaagc
     2941 ggcccaggcg cgggttggcc gagaagcggt cgaaggcgat cgggctgcgc gacttcagca
     3001 cgatctcggc caccgcgttg cggcagacct cgccgccctt cttgctaacc agttcatgga
     3061 cgtcgatgac gcgctcgact gtcttgacct cgacctgatg ctcggcggtg cccaacttca
     3121 gcttcaactt gctgccctcg cccatggcgt gcttgcccag ccagaacacg cgggcacgga
     3181 tctcgtgggc cagactgggg gcgtcgtcgg ccaggtgggc gatctggccg cgttcgacga
     3241 acacctggtc gtccagggtg aaggccacgg aacggccggc ttcggcggcg acgcgggtga
     3301 cgtggtcgcc ggcccagtcc tcgatggtgg cgacgcgggc ggtggtgccc gacggcgcga
     3361 acaccagctt gtcgcccacc ttgaggcggc cgctttcgat gcggccggcg acgatgcggc
     3421 ggtggtcgaa tttatagacg tcctggaccg gcaggcgcag ccccaggtcc acggcggtgc
     3481 catggctttc gaagccgtcg agtgcgccca gcacggtcgg ccccttgtac cagggcgagt
     3541 tggccgacgg cgtggcgacg ttgtcgccgc cgcgcgccga caccggcacg acgtgggtgg
     3601 gacgcacgcc gataccggcc agataggcct cgatctcggc cttgaccgcg cggaaacggt
     3661 cctcgctcca gtcgaccaaa tccatcttgt tgacggccac ggcgatctgc tcgaggccca
     3721 gcaggtgcag cagatagccg tggcggcggg tctgctcctg cacgccttcg tgggcgtcga
     3781 tcaccagcac ggcggcctcg gccgaagcgg cgccggtgat catgttcttg aggaattcct
     3841 tgtggcccgg cgcgtcaatc aggatgtagg gccggttcgc ggtctcgaag cggatgcgcg
     3901 aggtgtcgat ggtgatgccc tggtcgcgct cggcctgcag cgcgtccatc acgaacgccc
     3961 actcgaacgg catgccgcgc ttggcgcaga cttcccgaag gtactcgacc ttgccctcgg
     4021 gcagcgcacc ggtctcgttg aggatgcggc cgaccagggt ggacttgccg tggtcgacat
     4081 ggccgacgac gacgatggac agcgggttct tgctcatgac tttcttcccc ttcgttggca
     4141 ccccctcccc gccgcaggtg ggggagggtt ggggtggggg ca
//
LOCUS       DATIKR010000332         3121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_150654, whole genome shotgun sequence.
ACCESSION   DATIKR010000332 DATIKR010000000
VERSION     DATIKR010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150654"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VLL76_05240"
     CDS             <1..456
                     /locus_tag="VLL76_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase"
                     /protein_id="HSV28936.1"
                     /translation="EHPDPEVFATFGPHRRTVWRFHDTITERPDNAHPTPETVRAILD
                     FGDASRDMDVSHLLVHCHMGISRSTAAAAILMAQHNRGREAEAFAHLWDIRPRSWPNS
                     RMVALADAMLERGGALVAAMTAHHARVARAYPDFAALLRQGERAHEVPS"
     gene            546..974
                     /locus_tag="VLL76_05245"
     CDS             546..974
                     /locus_tag="VLL76_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSV28937.1"
                     /translation="MGSKKNEIVHYAALPFRMEDGHPMVLLVTSRETKRWIIPKGKPE
                     KKLLPHEVAAREAFEEAGVHGKITDEAFATFDSTKRLDNGREVPIKVRVYLLEITEIL
                     AEWPEKHERERRWVSPGEAALLASEPGLVGTMLDFSALWS"
     gene            1042..1686
                     /locus_tag="VLL76_05250"
     CDS             1042..1686
                     /locus_tag="VLL76_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HSV28938.1"
                     /translation="MLMRLIRSIMPKEERFVDHFASHADRMVAASVALTAMMKADPAD
                     REARFNEVCTVEGQADTIARDTLMALHRAFITPFDRSDIHALTTALDDTVDLIEEVAQ
                     RAVLYKVTEFSPRMLELADMIEQSARLLAEAIPLMNDITRNAERINSLCERIGKIESQ
                     ADSLLRVALSELIDSKPETTVFLGRKEVYELLETVTDRCDDVSDLIEGIVLDHV"
     gene            1686..2687
                     /locus_tag="VLL76_05255"
     CDS             1686..2687
                     /locus_tag="VLL76_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HSV28939.1"
                     /translation="MDATIALPALIAIIAVALFFDFINGLHDAANSIATVVSTRVLPP
                     KLAVAWAAFFNFIAFLFFGLHVAKTIGTGIVDPTIMDPWVILAALIGAIGWNLITWWL
                     GLPSSSSHALIGGIAGAGISKAGFGALLTSGFTKVSIAIVLSPLTGFALAILLMVIAS
                     WAVHRAAPFQVDRRFRQLQLVSAAMYSLGHGGNDAQKTMGIIAVLLFSQGYLGDTFHV
                     PFWVVIAAQIAMGLGTLMGGWRIVKTMGSKITDLKPFQGFCAETAGAMTLFGATFLGI
                     PVSTTHTITGSIVGVGSARRTSAVRWGVAANIVWAWIFTIPAAGIVAWLSYKIVALF"
     gene            2768..2959
                     /locus_tag="VLL76_05260"
     CDS             2768..2959
                     /locus_tag="VLL76_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018309680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HSV28940.1"
                     /translation="MARKYIDCRDYPDSNCTVALSADNEDELVEACVQHGIKVHGYQD
                     TPEFRKELREMAKEGSPPA"
     gene            complement(2978..3118)
                     /locus_tag="VLL76_05265"
     CDS             complement(2978..3118)
                     /locus_tag="VLL76_05265"
                     /inference="COORDINATES: protein motif:HMM:NF020091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HSV28941.1"
                     /translation="MGQGSEAQAACYVEVASNGGTIHGAARHENVTMAALMAVASALN
                     RG"
BASE COUNT          522 a         1107 c          963 g          529 t
ORIGIN      
        1 gagcacccgg accccgaggt gttcgccact ttcggccccc accgccgcac ggtttggcgg
       61 ttccacgaca ccatcaccga acggcccgac aacgcccacc cgacgcccga aacggtgcgc
      121 gcgatcctgg atttcggcga cgccagccgc gacatggacg tgtcgcacct gctggtccat
      181 tgccacatgg gcatctcgcg ttcgaccgcc gcggcggcga tcctgatggc gcagcacaac
      241 cgggggcgcg aggccgaggc cttcgcccat ctgtgggaca ttcgcccgcg cagttggccc
      301 aacagccgca tggtcgccct ggccgatgcc atgctggagc gcggcggcgc cttggtcgcc
      361 gccatgacgg cccatcatgc gcgggtggcg cgggcctatc ccgacttcgc ggcgctgctg
      421 cgccaggggg agcgggcgca cgaagtcccc tcctgacgta tgtgccgggc aggcttgcac
      481 cgacaagcct tgactcaggc cgccaactgt cacatacggc gatcctcaat tctccccggc
      541 ggatcatggg cagcaagaag aacgagatcg tgcattacgc ggcgttgccc ttccggatgg
      601 aagacgggca tcccatggtg ctgctcgtga cctcgcgcga gaccaagcgc tggatcatcc
      661 ccaaaggcaa gccggaaaag aagctgcttc cgcacgaggt cgcggcccgc gaggctttcg
      721 aggaagccgg cgtgcacggc aagatcaccg acgaggcctt cgccaccttc gacagcacca
      781 agcgcctgga caacggccgc gaggtgccga tcaaggtgcg ggtctacctg cttgaaatca
      841 ccgaaatcct ggcggaatgg ccggaaaagc atgagcgcga gcgccgctgg gtgtcccccg
      901 gcgaggccgc gctgctggcg tccgagccgg ggttggtggg gaccatgctc gacttctcgg
      961 cgctgtggag ctgactcccc ccaagacgaa acgctacttt cgtggtatga cagcgccatt
     1021 acaaaaagga cggggtttcc catgttgatg cgccttatcc gctccatcat gcccaaggag
     1081 gagcggttcg tggatcattt cgccagccat gccgaccgca tggtggccgc ctcggtggcg
     1141 ttgaccgcca tgatgaaggc cgacccggcc gaccgcgaag cgcgattcaa cgaagtctgc
     1201 accgtcgagg gccaggccga caccatcgcc cgcgacaccc tgatggcgct gcaccgcgcc
     1261 ttcatcacgc cgttcgaccg ttcggacatc cacgcgctga ccacggcgct ggacgacacc
     1321 gtcgacctca tcgaggaagt ggcgcagcgc gccgtcctct acaaggtcac cgagttcagc
     1381 ccgcgcatgc ttgaactggc cgacatgatc gaacaatcgg cccgcctgct ggccgaggcc
     1441 atcccgctga tgaacgacat cactcgcaac gccgagcgca tcaactcgct gtgcgagcgc
     1501 atcggcaaga tcgagagcca ggccgacagc ctgctgcgcg tcgccctgtc cgagctgatc
     1561 gacagcaagc ccgagaccac cgtcttcctg ggccgcaagg aagtctacga actgctcgag
     1621 accgtcaccg accgctgcga cgacgtgtcc gacctgatcg aaggcatcgt gctggatcac
     1681 gtgtgatgga tgccaccatc gccctgccgg cgctgatcgc catcatcgcc gtcgcgctgt
     1741 tcttcgattt catcaacggc ctgcacgacg cggcgaattc catcgccacc gtcgtctcca
     1801 cccgcgtgct gccgcccaag ctggcggtgg cctgggccgc gttcttcaac ttcatcgcct
     1861 tcctgttctt cggcctgcac gtcgccaaga ccatcggcac cggcatcgtc gatcccacca
     1921 tcatggaccc gtgggtcatc ctggctgcgc tgatcggcgc catcgggtgg aacctgatca
     1981 cctggtggct gggcctgccg tcgtcgtcgt cgcacgccct gatcggcggc atcgccggtg
     2041 ccggcatctc gaaggccggc ttcggtgcgc tgctgaccag cggcttcacc aaggtcagca
     2101 tcgccatcgt gctgtcgccg ctgaccggct tcgcgctggc catcctgttg atggtgatcg
     2161 cgtcgtgggc ggtgcaccgc gccgcgccct tccaggtcga ccgccgcttc cgccagcttc
     2221 agttggtgtc ggcggccatg tattcgctgg gccacggcgg caacgacgcc cagaagacca
     2281 tgggcatcat cgccgtgctg ctgttcagcc agggctatct gggcgacacc ttccacgtgc
     2341 cgttctgggt ggtgatcgcg gcccagatcg ccatgggcct gggcacgctg atgggcggct
     2401 ggcgcatcgt caagaccatg ggctcgaaga tcaccgacct gaagccgttc cagggcttct
     2461 gcgccgagac ggcgggcgcc atgaccctgt tcggcgccac cttcctgggc atcccggtgt
     2521 cgaccaccca caccatcacc ggctcgatcg tcggcgtcgg ctcggcccgg cgcaccagcg
     2581 ccgttcgctg gggcgtcgcc gccaacatcg tgtgggcctg gatcttcacc atccccgccg
     2641 ccggcatcgt ggcgtggctg agctacaaga tcgtcgcgct gttctgacgg gttacccccg
     2701 accgcgcttc tgcgatgccg acggcattct ccccatgtga tggtcctcat ccatggggag
     2761 aaaaacgatg gcacgcaaat acatcgattg ccgcgattac cccgattcca actgcaccgt
     2821 cgccctgtcc gccgacaacg aagacgaact ggtcgaggct tgcgtccagc acggcatcaa
     2881 ggtgcacggc tatcaggaca cccctgaatt ccgcaaggaa ttgcgcgaga tggcgaagga
     2941 aggcagccca ccggcgtagc cttcccgccg ccttccccta cccccggttc agcgcgctcg
     3001 ccaccgccat cagggccgcc atggtgacgt tctcgtggcg agcggcgccg tggatggtgc
     3061 cgccgttgct cgccacctcg acatagcacg ccgcctgggc ctcggagccc tggccgatgg
     3121 c
//
LOCUS       DATIKR010000333         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_186162, whole genome shotgun sequence.
ACCESSION   DATIKR010000333 DATIKR010000000
VERSION     DATIKR010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186162"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2159
                     /locus_tag="VLL76_05270"
     CDS             <1..2159
                     /locus_tag="VLL76_05270"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
                     /protein_id="HSV28942.1"
                     /translation="RIENYRSSDGNPVILALAFDDGTVVSLTEQMNRAPVANGQVADA
                     LAIEDEDFLMTLPAGLFSDPDALDELRLNARLADGEPLPAWLSFDPTSGVLSGKPGND
                     DVGDLDVLVEATDHFGANASVALRITVQNTNDAPELAIVLADRQATEDAPFAFTTPEG
                     AFRDVDAGDLLTLSATRADGSALPSWLSFDAATRTFSGTPTNDHVGSLAVRLTATDLA
                     GAQASQTFTIEVANVNDAPEVGVLLGNQTGRVGQATTWQLPQGAFIDVDAGDVLSYSV
                     TLGNGDPLPAWLAFDAATGTFSGAPTQAGSFALRVTATDLAGASSSQVFSLEVVGGGG
                     NLPPVTMSDAASVVEDRKLLVWGNVLANDHDPEGGQLHVANPGIRQGEYGFLALLPGG
                     GYAYALNNFSSKVQGLGAGETALDRFGYLASDGARETRGELAVTVLGANDAPELSRRL
                     ADVRLARGRSFAWRIPAGSFTDRDRNDQLTYTATLKNGQPLPAWLVFDAATQTFSGTA
                     PAKANSAIDVKVVARDGHGPCSEASDVFRIRLGSTTIVPGASITGAGGGNGRLLSDSS
                     LSVSAVSNEGGQLAATTGESARADDWLTRFLDGFKPAGTAVHALPPAMDGSWPDQGSA
                     QQSWSDLSGMTDDAGSFPRRWAALSRALGRLDAERRGVPAWSDPARGAELSGLMPLHG
                     ASAPACRPDGLSLACGGAAQLKRFDGLVEGLDKLPW"
     gene            2176..>2411
                     /locus_tag="VLL76_05275"
     CDS             2176..>2411
                     /locus_tag="VLL76_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronosyltransferase"
                     /protein_id="HSV28943.1"
                     /translation="MAGILIAWELGEALGHLARCLRLAAALRHRGHGVVLVLKDIRLP
                     GWRMDAKDVVVLQAPHSPRRQPTDGRMPVNYADV"
BASE COUNT          376 a          790 c          830 g          415 t
ORIGIN      
        1 tacggattga gaactaccga tcatcggatg ggaatccggt gatcctggcg ctggcgtttg
       61 acgatggtac cgtggtgtcc ctgaccgagc agatgaaccg cgcaccagtg gcgaatgggc
      121 aggtggccga tgcgctggct atcgaagatg aggacttcct catgacgcta cctgctggct
      181 tgttcagcga tccggacgca ttggatgaat tgcgactgaa cgcccgtctt gccgacggtg
      241 agccgttgcc ggcctggctg tcgtttgatc cgacgtcggg tgtcttaagc ggaaaacctg
      301 gcaatgacga tgtcggcgat ctggatgttc ttgtcgaggc cacggaccat ttcggagcaa
      361 acgccagtgt tgccctgcgc atcacggtgc aaaacaccaa tgatgcgccg gaattagcca
      421 ttgtgctcgc cgaccggcaa gccaccgagg acgcgccctt tgcctttacc acgccggaag
      481 gtgctttccg cgacgtcgac gcgggcgacc tactgacact ctcggcgacc cgtgccgatg
      541 gctcggcact gccgtcctgg ctcagcttcg acgcagcgac gcgcaccttc tctggcacgc
      601 cgaccaacga ccatgtcggt agcctcgcgg ttcggctcac cgccacggat cttgccggtg
      661 cgcaagcgag ccagaccttc accatcgagg tggccaacgt caacgacgcg cccgaggtgg
      721 gggtcttgct cggcaaccag accggccggg tgggtcaagc caccacttgg caactgcccc
      781 agggcgcctt catcgacgtg gatgcgggcg atgtgctgag ttactcggtc acgttgggga
      841 atggcgatcc actgccggcc tggctcgcgt tcgacgcggc cacgggcacg ttcagcggcg
      901 cgccgacgca agccggcagc ttcgccctgc gggtgaccgc caccgatctg gccggggctt
      961 cgtccagcca ggttttcagc ctggaagtcg ttggcggcgg gggcaacctg ccgccggtta
     1021 ccatgtcgga cgcggcgagc gtggtcgagg accgcaagct tctcgtctgg ggcaatgtgc
     1081 tggccaatga ccacgacccc gagggcggcc agctgcatgt ggccaatccc ggcatccgac
     1141 agggcgaata cggcttcctc gcgctgctgc cgggtggcgg ctacgcctac gcgctcaaca
     1201 acttctcgtc gaaggtccag ggcctgggcg cgggcgagac ggccctcgac cgcttcggct
     1261 acctcgccag cgacggcgcg cgggaaacac gcggcgaact ggccgtgacc gtgctgggcg
     1321 ccaacgacgc cccggaattg tcgcgccgcc tggccgatgt gcggctggct cgcggccggt
     1381 cctttgcgtg gcggattccc gccggcagtt tcaccgatcg cgaccgcaac gatcaactca
     1441 cctacacggc cacgctcaag aacggtcagc cgctgcccgc gtggctcgtg ttcgacgcgg
     1501 cgacccagac cttcagcggc acggcgccgg ccaaggccaa cagcgccatc gacgtcaagg
     1561 tagtggcgcg cgacggccat ggtccatgct cggaagcctc cgacgtgttc cgcatccgcc
     1621 ttgggtccac gacgatcgtg cccggcgcgt cgatcaccgg ggcgggcggc gggaacgggc
     1681 gtctcctgtc cgattcgtcg ctgtccgtct ctgcggtcag caacgaaggc ggtcagcttg
     1741 ccgccacgac aggagagagt gcaagggcgg atgactggct cactcgtttc ctggatgggt
     1801 tcaaacccgc cggcacggcg gtgcatgcgc tgccgcccgc catggacggc agttggcctg
     1861 accaggggag tgctcagcag tcctggtccg atttgtccgg catgacggac gacgccggca
     1921 gtttcccgcg ccgctgggcg gcgttgtcgc gggccctggg ccgactcgat gccgaacggc
     1981 ggggcgtgcc ggcctggagc gatccggccc ggggcgcgga attgtccggt ctgatgccgc
     2041 tgcacggggc cagcgcgccc gcgtgtcggc cggatggtct ttcgctggcc tgcgggggcg
     2101 ccgcgcaact caaacgattc gacgggctcg tggaaggcct tgacaagctg ccctggtaga
     2161 gggccggggc ggtccatggc cggcatcctg atcgcgtggg aactgggcga ggccttgggg
     2221 cacctcgccc ggtgcctgcg tcttgccgcg gcattgcggc atcgcggaca cggggtcgtg
     2281 ctggtgttga aggacatccg gctgcctgga tggcgcatgg acgcgaaaga tgtcgtcgtg
     2341 ctgcaggcgc cgcattcgcc acggcgccaa ccgaccgatg gacgcatgcc ggtcaactat
     2401 gccgacgtat t
//
LOCUS       DATIKR010000334         1826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_210970, whole genome shotgun sequence.
ACCESSION   DATIKR010000334 DATIKR010000000
VERSION     DATIKR010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210970"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1347
                     /gene="ftsA"
                     /locus_tag="VLL76_05280"
     CDS             106..1347
                     /gene="ftsA"
                     /locus_tag="VLL76_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HSV28944.1"
                     /translation="MRSGLIAALDVGSTKVCCFIARVQDDGTPRIVGIGHQVARGMRN
                     GAVVDLEELEHSIRASVDHAEEMAGERIKAVVVNVAGGQPQSASVKVEVSMNGHPVNE
                     ADIRRMLDHGRAHHESADRELIHAIPVDYTIDGNEGIKDPRGMFGERLGVAIHVISAN
                     VGPVRNLTTVVNRCHLDLEARVVNPYASGLACLVDDEKELGVTCIDMGGGTTSIAVFL
                     GGQLVHTDVIPVGGHHVTNDIARGLSTPLSYAERMKTLYGSAIPSPADDREMLKVPLV
                     GEDEDGASNQVPRSMLIQIIQPRLEETFELVRSHLEHGGFDKLAGRRVVLTGGASQMQ
                     GVRDLAGLVLDKQVRLGRPVGFQGLPEATGGPAFSTCAGLLRYALVHQPPATRGRKAA
                     AGGEASGSGLGRIGQWLKRNF"
     gene            1410..>1826
                     /locus_tag="VLL76_05285"
     CDS             1410..>1826
                     /locus_tag="VLL76_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HSV28945.1"
                     /translation="MLNFLPGAPQELKPKITVVGVGGAGGNAVNNMIASKLEGVEFIV
                     ANTDAQSIAQSRTERRIQLGTQATQGLGAGSRPDIGRAAAEESLDEIIAQIGGANMVF
                     ITAGMGGGTGSGAAPVIARAARDQGILTVGAVTKPFH"
BASE COUNT          324 a          640 c          602 g          260 t
ORIGIN      
        1 ccagatcacc atgatcgacc tgcgcgtccc cgaccggctg gtgatgcgca ccgagcgcca
       61 gaacgccgac gccggcaagc gcaaagacaa cggggcctga gacagatgcg tagcggactg
      121 atcgcagcac tcgacgtagg cagcaccaag gtgtgctgct tcatcgcgcg cgtgcaggac
      181 gacggcacac cgcgcatcgt cggcatcggc catcaggtgg cgcgcggcat gcgcaacggc
      241 gccgtggttg acctggagga gcttgagcat tccatccgcg cttccgtcga ccacgccgag
      301 gagatggcgg gcgagcgcat caaggcggtg gtggtcaacg tcgccggcgg ccagccgcaa
      361 tcggccagcg tcaaggtcga ggtgtccatg aacggccacc cggtcaacga ggccgacatc
      421 cgccgcatgc tggaccacgg ccgcgcccat cacgaaagcg ccgaccggga gctgatccac
      481 gccatcccgg ttgattacac aatagacggt aacgaaggca ttaaggaccc gcgtggaatg
      541 ttcggcgagc gcctgggcgt cgccatccac gtgatctcgg ccaatgtcgg cccggtgcgc
      601 aacctgacca ccgtcgtcaa ccgctgccac ctggacctgg aagcccgcgt cgtcaacccc
      661 tatgcctcgg gcctggcctg cctggtggac gacgaaaagg aactgggcgt cacctgcatc
      721 gacatgggcg gcggcaccac ctcgatcgcc gtgttcctgg gcggccagtt ggtccacacc
      781 gacgtcatcc cggtgggcgg ccaccacgtc accaacgaca tcgcgcgcgg cctgtccacg
      841 ccgctgtcct atgccgagcg catgaagacg ctgtacggca gcgcgatccc ttcccccgcc
      901 gacgaccgcg agatgctgaa ggttccgctg gtcggcgagg acgaggacgg cgcctcgaac
      961 caggtgccgc gctcgatgct gatccagatc atccagcccc ggctcgagga aaccttcgaa
     1021 ctggtgcgct cgcatctcga gcatggcggc ttcgacaagc tcgccggccg ccgcgtcgtg
     1081 ctgaccggcg gcgccagcca gatgcagggc gtgcgcgacc tcgccggact ggtgctcgac
     1141 aagcaggtgc ggctgggccg ccctgtcggt tttcaggggt tgcccgaggc cacgggcgga
     1201 cccgccttct cgacctgcgc cggattgctc cgctacgcgc tcgtccacca gccgcccgcc
     1261 acgcgcggac ggaaggcggc ggcgggcggc gaggcctccg gctcggggct gggacggata
     1321 ggacaatggc tcaaacgaaa cttctgactt tgacccaggg ataaaaccgg ccgaccgaaa
     1381 acggcggcct tagcagcgcg gaggttcata tgctcaactt tcttccgggt gctccccagg
     1441 agctcaagcc gaagatcacc gtggtcggtg tcggtggcgc cggcggcaac gccgtcaaca
     1501 acatgatcgc ctcgaagctc gaaggcgtgg aattcatcgt cgccaacacc gacgcccagt
     1561 ccatcgccca gtcgcgcacc gagcgccgca tccagttggg cacccaggcg acccaagggt
     1621 tgggcgccgg ctcgcgtccc gacatcggcc gcgccgccgc cgaggaatcg ctggacgaga
     1681 tcatcgccca gatcggtggc gccaacatgg tgttcatcac cgccggcatg ggcggcggca
     1741 ccggctcggg cgccgctccg gtgatcgcgc gcgcagcgcg cgatcagggc atcctgaccg
     1801 tcggcgcggt gaccaagccg ttccac
//
LOCUS       DATIKR010000335         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_29408, whole genome shotgun sequence.
ACCESSION   DATIKR010000335 DATIKR010000000
VERSION     DATIKR010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29408"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..>1653
                     /locus_tag="VLL76_05290"
     CDS             23..>1653
                     /locus_tag="VLL76_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proprotein convertase P-domain-containing
                     protein"
                     /protein_id="HSV28946.1"
                     /translation="MNAVTAQTNTVAQDYALVIASGDREIPGALTVTEQPAVTADTRQ
                     FTVITNITVPLPLLHQRAGASASTIVTLDGATNQWRFFSITNVMGYTNAVFLTFQPPN
                     LAVPRMGVRARLEEEHARPEADIDLYVSRNPAITNLDPAALAGADKSLGRGGTEIITY
                     TNAVAGVYYIAVKSEDQMAAEFGLFAGFSERPFDEEDEFGNRHLRGFPAPVFVPDGSP
                     ANPGAAFTFGIATRPITVRKVVVTNVITHESFGDLLGNLSHNNNFAVLNNHSFGPGDF
                     TQERRYDDSGEFPLPGVGPTDGPGSLRNFVGEQGAGLWLLTMIDNAPGLAGSVDNLHI
                     KLEPNLLDEGLDLWLTVGPESWSYATVRVPPGATNLTVCLTNLSATPLPVDLYIRRGD
                     FPTFDDYDKKLTVVPPSAGCLTLTPADLPPLQAGRYYIGVFNPHSIEQQVLISVDISG
                     EEPVPAVFSRFGHMPILDDAVTNSVIVVTNDQRVISVEAAVRLNHPRVSDLAIQLVSP
                     NGERVLLFENRGGLEHAGLGADLANTNFFAFTATGG"
BASE COUNT          282 a          668 c          443 g          260 t
ORIGIN      
        1 cgtcatcgga cgctcggtca acgtgaacgc cgtcaccgcc cagaccaaca ctgtggccca
       61 ggattacgcg ctcgtcatcg cgagcggcga ccgcgaaatt cccggcgcgc tcaccgtcac
      121 cgagcagcct gcggtcacgg cggacacgcg gcagttcacc gtcatcacca acatcaccgt
      181 cccgctgccg ctgctccacc agcgcgcggg cgccagcgcc tcgaccatcg tcaccctcga
      241 cggcgcgacc aaccagtggc gcttcttttc catcacgaac gtcatgggct acaccaacgc
      301 cgtgttcctc accttccagc cgccgaacct cgcggtgccg cgcatgggcg tgcgcgcccg
      361 gctcgaggaa gaacacgccc ggcccgaggc cgatattgac ctctatgtct cccgcaatcc
      421 cgccatcacc aacctcgacc cggccgccct cgccggcgcc gacaagtccc tcggccgcgg
      481 cggcaccgaa atcatcacct acacgaacgc cgtggcgggc gtctattaca tcgccgtgaa
      541 gtccgaggac cagatggccg ccgaattcgg cctgttcgcc ggcttcagcg agcggccgtt
      601 cgacgaggag gacgaatttg gcaaccgcca cctccgcggc ttccccgccc cggtgttcgt
      661 ccccgacggc tcgcccgcca accccggcgc ggccttcacg ttcggcatcg ccacccggcc
      721 catcaccgtg cgcaaggtcg tcgtcaccaa cgtcatcacc cacgagagct tcggcgacct
      781 gctcggcaac ctgagccaca acaacaattt cgccgtcctc aacaaccact ccttcggccc
      841 cggcgacttc acccaggaac ggcgctacga cgacagcggc gagtttccgc tgcccggcgt
      901 cggcccaacc gacggccccg gcagcctccg caacttcgtc ggcgaacagg gcgccggcct
      961 gtggctgctg acgatgattg acaacgcgcc cggcctggcc gggtccgtgg acaacctcca
     1021 tatcaagctc gaacccaatc tgctcgacga gggcttggac ctgtggctca ccgtcggtcc
     1081 cgagtcctgg tcctacgcca ccgtccgcgt tccccccggc gccaccaatt tgaccgtctg
     1141 cctcacgaat ctttccgcca cgcccctgcc tgtggacctc tacatccggc gcggggactt
     1201 tccgaccttc gacgactacg acaaaaagct caccgtcgtc ccgccgtccg ccggctgcct
     1261 gacgctcacg cccgccgacc tgccgccgct ccaagccggg cgctactaca tcggcgtctt
     1321 taatccccac agcatcgaac agcaggtgct catctcggtg gacatttcgg gcgaggaacc
     1381 cgtgccggcc gttttcagcc gcttcggcca catgccgatc ctcgatgacg ccgtcaccaa
     1441 cagcgtaatt gtggtgacca acgaccagag ggtcatcagc gtcgaggccg ccgtgcgtct
     1501 caaccacccg cgcgtctccg acctcgccat ccagcttgtc agccccaacg gcgagcgcgt
     1561 cctcctcttc gagaaccgcg gcggcctcga acacgccggc ctgggcgcgg acctcgccaa
     1621 caccaacttc ttcgccttca ccgccaccgg cgg
//
LOCUS       DATIKR010000336         2258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_162309, whole genome shotgun sequence.
ACCESSION   DATIKR010000336 DATIKR010000000
VERSION     DATIKR010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162309"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VLL76_05295"
     CDS             <1..217
                     /locus_tag="VLL76_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HSV28947.1"
                     /translation="VNGAGDTLSALILAHALHGHDAPEALSLAVSSLFGVLEKGLAMG
                     RRELALVAAQDEIVSPTKLFPPLPVGC"
     gene            217..837
                     /locus_tag="VLL76_05300"
     CDS             217..837
                     /locus_tag="VLL76_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HSV28948.1"
                     /translation="MDGLIFLRGIAIGFAIAAPIGPVGILCIRKALADGRVAALVAGL
                     GAALADTTFGAVVGLGLGAAAELLGGYATPLKVVGGLFMLGIGLHTWRAAAIEVVPAK
                     GKGPGLWRDFVSTFLITITNPGTIMGVMGVFAAFGAAAQPVGVAQSWLLVLGVFLGSV
                     LWWLLLAEITIAVKARFTPERMRLFNHVSGGLLMAFGLGALASLAL"
     gene            complement(1003..1626)
                     /locus_tag="VLL76_05305"
     CDS             complement(1003..1626)
                     /locus_tag="VLL76_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV28949.1"
                     /translation="MSALGAAALLAFATGPAHADTRQDARAFIMNLADTAMNTVAIKS
                     IDDAERNRRFRTLFVNTFDLPEIGKMVLGRYWRIATPEQQQEFLRLFEEVQVLTWAKR
                     FNDYSGETLEIVAVNPEGETNVAIDSLIHRSKQDPLQVAWLLRKTDGSFRVLDIKVEG
                     ASMALTYRSDYGAVIQASGGKIEGLLNALRKKVGQLGGDAATATAQR"
     gene            complement(1671..>2258)
                     /locus_tag="VLL76_05310"
     CDS             complement(1671..>2258)
                     /locus_tag="VLL76_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HSV28950.1"
                     /translation="LKPLAQGYRAAVPQFGRDRVRDFLNNLRAPIVFANDVLQGETDR
                     AVQTMMRFAFNTGFGIGGLFDLAAEGGIPFHDEDFGQTFAVWGLPEGPYIVLPILGPS
                     NVRDTGGMVTEWVADPVNLYLHNTDRDWAIWTRTGLAGIDKRERLLDPLEEIERTSLD
                     YYSSLRSLYRQRRDAEIKNQKIDKPAPGVSPTGSR"
BASE COUNT          328 a          730 c          802 g          398 t
ORIGIN      
        1 ggtcaacggc gccggcgaca ccctgtcggc gctgatcctg gcgcacgccc tgcacggcca
       61 cgacgcgccc gaggcgctgt cgctggcggt atccagcctg ttcggcgtgc tggagaaggg
      121 cctggccatg gggcggcgcg agctggccct ggtcgccgcc caggacgaga tcgtcagccc
      181 gaccaagctg ttcccgccgc tgccggtggg gtgctagtgg acgggctgat tttcctgcgc
      241 gggatcgcca tcggcttcgc catcgccgcc cccatcgggc cggtcggcat cctgtgcatc
      301 cgcaaggccc tggccgatgg ccgcgtcgcc gccttggtcg ccggcctggg cgcggcgctg
      361 gccgacacca ccttcggtgc cgtggtcggg ttgggcctcg gcgcggcggc ggagctgctc
      421 ggcggctacg ccacgccgtt gaaggtggtc ggcggcctgt tcatgctggg catcggcctc
      481 cacacctggc gggcggcggc catcgaggtg gtgccggcca agggcaaggg acccggcttg
      541 tggcgcgact tcgtgtccac cttcctgatc accatcacca accccggcac catcatgggc
      601 gtgatgggcg tgttcgccgc cttcggcgcc gccgcgcagc cggtgggcgt ggcgcaatca
      661 tggctgctgg tgctgggggt gttcctgggc tcggtgctgt ggtggctgct gctggccgag
      721 atcaccatcg cggtcaaggc ccgcttcacg cccgagcgca tgcgtctgtt caaccacgtc
      781 tcgggcggcc tgctgatggc ctttgggctg ggcgccctgg cgagcctggc gttgtagaac
      841 accgcgggcc tgtcgcccag gaaagcttgc cctacaccat cgtcatggcc gggcgtgaac
      901 ccggccatcc acgcggatcc gcctaaggtg ctgattttaa gcggaactcg cgtctgccac
      961 gtagatcgcc gggtcaagcc cggcgatgac gaacaaaagc cgttagcgct gcgccgtcgc
     1021 ggtggcggcg tcgccgccga gttggccgac cttcttgcgc agggcgttga gcaggccttc
     1081 gatcttgccg cccgacgcct ggatcacggc gccgtaatcc gagcgatagg tcagggccat
     1141 gctggcgcct tcgaccttga tgtcgagcac gcggaagctg ccgtccgtct tgcgcagcag
     1201 ccacgccacc tgcagggggt cctgcttgct gcgatggatc agcgaatcga tggcgacgtt
     1261 ggtctcgccc tcgggattga ccgcgacgat ttccagggtc tcacccgaat aatcgttgaa
     1321 gcgcttggcc caggtcagca cctgcacttc ctcgaacagg cgcaggaatt cctgctgctg
     1381 ctcgggcgtg gcgatgcgcc aatagcggcc caacaccatc ttgccgatct cgggcaggtc
     1441 gaaggtgttg acgaacaggg tgcgaaagcg acgattgcgc tcggcgtcgt cgatgctttt
     1501 gatcgccacc gtgttcatgg ccgtgtcggc caggttcatg atgaaggcgc gggcatcctg
     1561 cctggtgtcg gcatgggcgg ggccagttgc gaaggcaagc agggccgccg cccccagggc
     1621 ggacatcaga gaacgacggg acaacatggg acgagctgct ctcctggatt tcaccggctg
     1681 cccgtggggc tgacgccggg agccggcttg tcgatcttct ggttcttgat ctcggcatca
     1741 cgacgctgcc ggtaaaggga gcgaagggag gagtagtaat ccagcgaggt acgctcgatt
     1801 tcctccagcg ggtcgagcag gcgctcgcgc ttgtcgatgc cggccaggcc ggtacgggtc
     1861 cagatcgccc agtcgcggtc ggtgttgtgc aggtacaggt tgaccgggtc ggccacccat
     1921 tcggtgacca tgccgccggt gtcgcggaca ttggacgggc ccaggatggg cagcacgatg
     1981 tacggaccct cgggcaagcc ccacacggcg aaggtctgcc cgaaatcctc gtcatggaac
     2041 gggatgccgc cctcggctgc caggtcgaac aggccgccga tgccgaagcc ggtgttgaag
     2101 gcgaagcgca tcatggtctg gacggcgcgg tcggtctcgc cctgcagcac gtcgttggcg
     2161 aacacgatgg gggcgcgcag gttgttcagg aagtcgcgca cgcggtcgcg gccgaattgc
     2221 ggcacggcgg cgcgatagcc ctgggccagc ggcttcag
//
LOCUS       DATIKR010000337         2199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_186201, whole genome shotgun sequence.
ACCESSION   DATIKR010000337 DATIKR010000000
VERSION     DATIKR010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186201"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VLL76_05315"
     CDS             complement(<1..774)
                     /locus_tag="VLL76_05315"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV28951.1"
                     /translation="MDRIGTIGDDVLVSSDDSEKLEGGLGDDVLLGEGGDDSLDAGKG
                     ADILDGGAGSDKLLGGEGNDLLIGGAGLDTLDGGLGDDVYVLDVGDIGANGVPLDIIV
                     DVGGSDTVETAASVNLSANTSIETIVLTGADDVSATGNALNNTVQGNDGDNTLNGGTG
                     TDTLIGGVGDDTYVVDTQLDQVVEYDGEGNDTVQTTLTTLSLSGYSNIENLAYSGTAA
                     ATLTGNSGANVITGAAGADLLDGGAGADTLVGGAGDDTYV"
     gene            complement(886..>2199)
                     /locus_tag="VLL76_05320"
     CDS             complement(886..>2199)
                     /locus_tag="VLL76_05320"
                     /inference="COORDINATES: protein motif:HMM:TIGR01843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV28952.1"
                     /translation="LAPTAAEAEAPPRDPASIAKPVRVGVLILAAFWGSLSLWSVSAD
                     VAGAVVAQGVVVPEGRRKTIQHLTGGIVREILVREGQSVAEGQPLIRLDEVQTQASVD
                     VYRNQYASAKALEARLLAEQRGAADIPPVPELDGKEGRAALEQERKVFLTRKAAFDGE
                     VGLLRERVSQLNQEIKGHENLKAANTRQLALIEQELEGLRDLFEKGFTPKTKVLQYER
                     TQAGLRGDVGYRESEIARARQRISETRAEMTQLEKRRLDEVNRELRDVQTRIADVEPR
                     LVAANQAMRQTTLAAPVAGWVLNLSANTVGGVVEPGKPIMDLVPEDSPIIVQAQIQPT
                     DIDAVAVGQAAKIHLLNKGLGSEDPLDGTVTVVSADRLVEQRAGVPYYQAEVEIDRAS
                     LSRPGVPKIIPGFPVQVIIPTTPRTLFAYLMDPLTQRFRTALRER"
BASE COUNT          333 a          735 c          728 g          403 t
ORIGIN      
        1 cacataggtg tcgtcgcccg cgccgccgac cagggtatcg gccccggcgc caccatccag
       61 caggtcggcg ccggccgcgc cggtgatgac gttggccccc gaattgccgg tcagggtggc
      121 ggccgcggtg ccggaatagg ccaggttctc gatgttggaa tagccgctga gcgacagcgt
      181 cgtcagcgtg gtctggaccg tatcgttgcc ctcgccgtcg tactcgacca cctggtcgag
      241 ctgggtatcg acgacatagg tgtcgtcgcc gacgccgccg atcagggtgt cggtgccggt
      301 gccgccattc agcgtattgt cgccgtcatt gccctggacg gtgttgttga gcgcgttgcc
      361 ggttgccgac acgtcgtcgg cgccggtcag cacgatggtc tcgatagagg tgtttgccga
      421 gaggtttacg gaggcggcgg tctcgacggt atccgaaccg ccgacatcga cgatgatgtc
      481 gaggggaacg ccgttggcgc cgatgtcgcc cacgtccagc acatagacgt cgtcgccgag
      541 accgccgtcc aacgtgtcga gtcccgcgcc gccgatcaga agatcgttgc cctcgccgcc
      601 aagcagcttg tcactgccgg caccgccatc gaggatatcg gcgcccttgc ccgcgtcgag
      661 gctgtcgtcg ccgccttcac ccagcaggac gtcatcgcca aggccaccct ccagcttctc
      721 gctgtcgtcc gagctcacga ggacgtcgtc gccgatggtg ccaatgcgat ccatagtata
      781 ccccctacct taggcaatag ggggcaatac ctaccacggc ggcacgagca tgacaataat
      841 cgagcaccac ttttgggctg ctaaaagata cctagggtga ttccctcagc gctcgcgtag
      901 cgccgttcgg aagcgctggg tcaaggggtc cattaggtag gcaaacagcg tccttggcgt
      961 tgtcgggatg attacctgaa cgggaaaacc cgggattatt ttaggcacac ccggtctact
     1021 taaggacgcg cgatctattt ctacctcagc ttgataatag ggcacccctg ccctttgctc
     1081 caccagccgg tcggccgaca ccaccgtcac ggttccgtca agcggatcct cggatcccag
     1141 ccccttgttc agcaggtgaa tcttggcggc ctggccgacg gcgacggcgt cgatgtcggt
     1201 gggctggatc tgggcctgga cgatgatcgg cgagtcctcg ggaaccagat ccatgatcgg
     1261 cttgccgggt tcgacgacac cgcccacggt gttggcgctg aggttcagga cccagcccgc
     1321 caccggagcg gcgagcgtgg tctggcgcat ggcctggttg gccgccacca ggcggggctc
     1381 cacgtcggcg atgcgggtct ggacgtcgcg cagttcgcgg ttgacctcgt cgaggcgccg
     1441 cttctccaac tgcgtcatct cggcgcgggt ttccgagatg cgctggcggg cacgggcgat
     1501 ctcgctctcg cgatagccga cgtcgccgcg caggccggcc tgggtgcgct cgtactgcag
     1561 aaccttggtc ttgggcgtga agcctttttc gaacaggtcg cgcaggccct ccagctcctg
     1621 ctcgatcagg gcgagctggc gcgtgttggc ggccttgagg ttttcgtggc ctttgatctc
     1681 ctgattgagc tgcgacaccc gctccctcag caaaccgacc tcgccgtcga acgccgcctt
     1741 gcgggtcagg aacaccttgc gctcctgctc cagcgcggcg cggccctcct tgccgtcgag
     1801 ctcgggcacc ggcgggatgt cggcggcgcc ccgctgctcc gccagcaggc gggcctccaa
     1861 cgccttggcg ctggcatatt ggttgcgata gacgtcgacg ctggcctggg tctggacttc
     1921 gtcgaggcgg atcagcggct gcccctcggc caccgactgg ccctcgcgca ccaggatttc
     1981 ccggacgatg ccgccggtca ggtgctggat ggtcttgcgc cggccttcgg gcacgacgac
     2041 gccctgggcg acgacggcgc cggcgacatc ggcgctgacc gaccacagcg agaggctgcc
     2101 ccagaatgcg gccaggatca gcacgccgac ccgcaccggc ttggcgatcg aggcgggatc
     2161 acgcggcggc gcctcggcct cggcggcggt cggcgccag
//
LOCUS       DATIKR010000338         4556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_198753, whole genome shotgun sequence.
ACCESSION   DATIKR010000338 DATIKR010000000
VERSION     DATIKR010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4556
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198753"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VLL76_05325"
     CDS             complement(<1..467)
                     /locus_tag="VLL76_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018412085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV28953.1"
                     /translation="MTLEVIRRGEGRPGRPPLLFVHGAFAGAWIWDEHFLPFFAEAGW
                     ECVALSLRGHGKSSGHDRLDHFGLHHYVEDVAAIAAGLERPPLVVGHSLGGAVAQRFV
                     SGHPAAGQVLIAASPPQGFSGPAWWMALHRPGFLWQLGLLETLGKRYVDPEVL"
     gene            complement(464..853)
                     /gene="gloA"
                     /locus_tag="VLL76_05330"
     CDS             complement(464..853)
                     /gene="gloA"
                     /locus_tag="VLL76_05330"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HSV28954.1"
                     /translation="MTWRMLHTMVRVGNLDKSIDFYTRLLGMKLLRRADYPEGRFTLA
                     FVGYGDEADNTVIELTHNWDTEAYDLGTGFGHIALGVPDIYAACEQLAKEGVKIPRPP
                     GPMKHGSTVIAFVEDPDGYKIELIEKK"
     gene            complement(850..2025)
                     /gene="lpxB"
                     /locus_tag="VLL76_05335"
     CDS             complement(850..2025)
                     /gene="lpxB"
                     /locus_tag="VLL76_05335"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HSV28955.1"
                     /translation="MTLIYVIAGEPSGDLLGGRLMAGLKARTDGAVQFAGIGGQAMRA
                     QGLDSLFPMAELSVMGLVEVMPRIPRILRRVRQTVADIGARRPDAIVTIDSWGFTGRV
                     QKAVQELYPDIPRIHYVAPMVWAWKPNRTKKLARVLDLLMTLLPFEPPLFEKDGLRSL
                     HVGHPVIECGAESGDGAAFRARHGIAADAPVLVALPGSRHSETSRLLPVFGEAIRLIA
                     ARQPGLTLVVPTVETVAEQVRAAVKSWDLPAIVVDGAAEKYDAFAAGTVGMAASGTVA
                     LELALAGLPTIITYRVSPLTAFVARRFLGLGKTLKWATLVNILMDRTVMPELLQEDCT
                     PQAVADGVLGLLGDPAARQAMRAEMRDAMVRLGYGGVSPSARAADAVLAFIAERKRR"
     gene            complement(2022..2840)
                     /gene="lpxI"
                     /locus_tag="VLL76_05340"
     CDS             complement(2022..2840)
                     /gene="lpxI"
                     /locus_tag="VLL76_05340"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384866.1"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HSV28956.1"
                     /translation="MTAKLGIVAGGGEFPGLVIAACRAQGRPFHVLALSGHADPIVIG
                     DAPADWIRLGEAGTGLKILREAGVTELVMIGPVRRPSLSELAPDWWSTKFFAKVGLKA
                     LGDDGLLRALAGALEAEGFRIVGIDDVLSDCLAPEGVFGATQPDEQARADIARGWEVA
                     KALGALDVGQAVVVQQGLVLGVEAIEGTDRLITRCGELKREGVGGVLVKVKKPGQDRR
                     LDLPTIGLATVRGAAAAGLRGIVVEAGGALVLGREALAAEADRLGLFVLGQARP"
     gene            complement(2830..3630)
                     /gene="lpxA"
                     /locus_tag="VLL76_05345"
     CDS             complement(2830..3630)
                     /gene="lpxA"
                     /locus_tag="VLL76_05345"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HSV28957.1"
                     /translation="MPNIHPSAIVDPNARVADSATIGPFCVVGPDVELGDNVELISHV
                     AVAGRTTIGEGTRIFPFASIGHQPQDLKYHGEPSTLEIGKNNQIREYVTMQPGTEGGG
                     MVTRVGDNCLFMASAHVAHDCILGNNVIMANNATLAGHVVVGEFAFLGGLSAVHQFVR
                     IGKHAMIGGMSGVEADVIPFGMVIGNRAHLNGLNIIGLRRRGFTRDEIHTLRNAYRLL
                     FAPEGTLAERVVDVAEQFKDNAVVMEIVEFIRSDSSRSLCTPGFEDDR"
     gene            complement(3630..4091)
                     /gene="fabZ"
                     /locus_tag="VLL76_05350"
     CDS             complement(3630..4091)
                     /gene="fabZ"
                     /locus_tag="VLL76_05350"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HSV28958.1"
                     /translation="MMSEAERSNVIDINRIMQMIPHRYPFLMVDKVIDVVADQSAVGV
                     KNVTINEPFFQGHFPQRPVMPGVLIIEAMAQTAAVLVVETLGPSAEGKLVYFMSVDEA
                     RFRKPVGPGDTLMIHVSKERSRGNVWKFRAEAKVGDTLMAEAVYAAMILDN"
     gene            complement(4088..>4556)
                     /locus_tag="VLL76_05355"
     CDS             complement(4088..>4556)
                     /locus_tag="VLL76_05355"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HSV28959.1"
                     /translation="GQDGFGFAMGPQGHLKMPQLGRVVIGDDVEIGANCTIDRGAGPD
                     TVIGAGSMIDNLVQIGHNVQMGRGCVIVSQVGISGSTKLGDFVAAGGQAGIAGHLKIG
                     SGARIAARSGLMRDVGPGETVGGAPAVPMTEWLRQCAVLSKLARKKGRESERG"
BASE COUNT          757 a         1550 c         1534 g          715 t
ORIGIN      
        1 tacagcactt cgggatcgac gtagcgcttg cccagggttt ccagcaagcc caattgccac
       61 aggaagccgg ggcggtgcag cgccatccac caggccgggc cgctgaagcc ctggggcggc
      121 gacgccgcga tcaggacctg gccggcggcc ggatggccgc tgacgaaacg ttgcgcgacc
      181 gcaccgccca gggaatggcc aaccaccagc ggcggccgtt ccagccccgc cgcgattgcg
      241 gccacgtcct cgacgtaatg atgcaggccg aaatggtcga gccggtcgtg gcccgagctc
      301 ttgccatggc cgcgcaggct gagggcgacg cattcccagc cggcctcggc gaagaatggc
      361 aggaaatgct cgtcccagat ccaggcgccg gcgaaggcgc catgcacgaa caacaacggc
      421 gggcggccgg ggcggccctc gcctcttctg atgacttcca gggtcacttc ttctcgatca
      481 gttcgatttt gtagccgtcg gggtcctcga cgaaggcgat gaccgtcgag ccgtgcttca
      541 tggggcccgg cggccggggg atcttcaccc cctccttggc gagttgttcg caggcagcgt
      601 agatgtcggg cacgcccagg gcgatatggc cgaagccggt gccgaggtca taggcctcgg
      661 tatcccaatt gtgggtgagt tcgatgacgg tgttgtcggc ctcgtcgccg tagccgacga
      721 aggccagggt gaagcggccc tcgggatagt cggcgcggcg cagcagcttc atccccaaga
      781 gccgcgtata gaaatcgatg gatttgtcca gattgccgac acggaccatg gtgtgaagca
      841 tgcgccaggt catcgtcttt tcctctccgc gataaaagcg agcaccgcgt cggcggcccg
      901 cgcactggga ctgacgccac cgtagccgag gcggaccatg gcgtcgcgca tttccgcccg
      961 catggcctga cgcgccgccg gatcgcccag caggccgagg acgccgtcgg cgaccgcctg
     1021 gggcgtgcag tcctcctgca gcaattctgg catcaccgtg cggtccatca ggatgttgac
     1081 cagcgtcgcc catttcaagg tcttgcccag gccgaggaag cgccgggcga cgaaggcggt
     1141 cagtggcgac acccggtagg tgatgatggt gggcagtcct gccaaggcca attccagggc
     1201 gacggtgccg gaagcggcca tgccgaccgt tccggcggcg aaagcatcgt acttctcggc
     1261 cgccccgtcc accacgatgg ccggcagatc ccaggatttg accgccgccc gcacctgttc
     1321 cgccaccgtc tcgacggtcg gcaccaccag cgtcaacccg ggttgacggg cggcgatcag
     1381 gcggatggcc tcgccgaaca ccggcaacag ccgtgaggtc tctgaatggc ggctgccggg
     1441 cagcgccacc agcaccgggg cgtcggcggc gatgccgtgg cgggcgcgga acgcggcgcc
     1501 gtcgccgctt tcagccccgc attcgatcac cgggtgaccg acatggagcg agcgcaggcc
     1561 atccttttcg aacagcggcg gctcgaacgg caacagcgtc atcagcaggt caagaacccg
     1621 cgccaacttc ttggttctat tgggcttcca cgcccacacc atgggcgcga cgtaatggat
     1681 gcgcgggatg tcgggataaa gctcttgcac ggccttttgc acccggccgg tgaagcccca
     1741 ggaatcaatg gtgacgatgg cgtctggccg gcgggcgccg atgtcggcca cggtctgcct
     1801 gacccggcgc aggatgcgcg ggatgcgcgg catcacctcg accaagccca tcaccgacag
     1861 ttcggccatg gggaacagcg agtccagccc ctgcgcccgc atggcctggc cgccgatgcc
     1921 ggcgaattgg acggcgccat cggtgcgcgc cttgaggccg gccatcagcc ggccgccgag
     1981 cagatcgccc gaaggctcgc cggcgatgac gtagatcagg gtcatggccg cgcctgaccg
     2041 agcacgaaca gccccagccg gtcggcctcg gccgccagcg cctcacgccc caacaccaag
     2101 gcgccgccag cctcgaccac gatgccgcgc aggcctgcgg cggccgcccc ccgcacggtg
     2161 gcgaggccga tggtgggcag gtcgagccgg cggtcctggc cgggcttttt gaccttgacc
     2221 agcacgcccc ccaccccttc gcgcttcaat tcaccgcagc gggtgatcag gcggtcggtg
     2281 ccctcgatgg cctcgacgcc cagcaccagg ccctgctgca ccaccaccgc ctggccgacg
     2341 tcgagcgcgc ccagggcctt ggccacctcc cagccgcggg cgatgtcggc gcgggcctgt
     2401 tcgtcgggtt gggtggcccc aaagacgcct tcgggcgcca ggcaatcgga cagcacgtcg
     2461 tcgatgccga caatgcggaa gccctcggcc tccagggcgc ctgcgagcgc ccgcaacagg
     2521 ccgtcgtcgc ccaaggcctt gaggccgacc ttggcgaaga acttggtgct ccaccaatcg
     2581 ggagccagct cggacaggct gggacggcgc accgggccga tcatcaccag ttcggtgacg
     2641 ccggcctcgc gcaggatttt caggccggtg ccggcctcgc ccaggcggat ccagtcggcc
     2701 ggggcgtcgc caatgacgat gggatcggca tggccgctga gcgccaggac gtggaagggt
     2761 cgcccctggg cgcggcaggc ggcgatgacg agtccgggga actcgccgcc gcccgccact
     2821 atgcccagct tagcggtcat cctcgaagcc gggcgtgcac agcgagcgcg aggaatccga
     2881 gcggatgaac tcgacgatct ccatcaccac ggcattgtcc ttgaactgct cggcgacatc
     2941 gacgacgcgc tcggccaggg tgccctcggg cgcgaacagc agccggtagg cgttgcgcag
     3001 ggtgtggatc tcgtcgcggg tgaagccgcg gcggcgcagg ccgatgatgt tgaggccgtt
     3061 gagatgggcg cggttgccga tcaccatgcc gaaggggatg acgtcggcct cgacgcccga
     3121 catgccgccg atcatggcgt gcttgccgat gcgcacgaac tggtgcaccg ccgacagccc
     3181 gcccaggaag gcgaactcgc ccaccaccac gtgaccggcc agggtggcgt tgttggccat
     3241 gatcacgttg ttgcccagga tgcaatcgtg ggcgacgtgg gccgaggcca tgaacaggca
     3301 attgtcgccg acccgggtga ccatgccgcc gccttcggtg ccgggctgca tggtgacgta
     3361 ttcgcggatc tggttgttct tgccgatctc aagcgtcgat ggctcgccgt gatacttgag
     3421 gtcctgcggc tggtggccga tggacgcgaa cgggaagatg cgcgtgccct cgccgatggt
     3481 ggtgcggccg gcaaccgcca catgcgagat cagctcgacg ttgtcaccca gttcgacgtc
     3541 ggggccgacc acgcagaacg ggccgatggt cgcgctgtcg gcgacgcggg cgttggggtc
     3601 gacgatggcg gagggatgga tgttcggcat cagttatcca ggatcatcgc tgcatagacg
     3661 gcctcggcca tcaaggtgtc gcccaccttg gcctcggccc ggaacttcca cacgttgccg
     3721 cgcgagcgtt ccttcgaaac gtggatcatc agcgtgtcgc ccgggccgac cggcttgcgg
     3781 aagcgggctt cgtccacgct catgaaatag accagcttgc cctcggccga cgggcccagg
     3841 gtttcgacca ccagcacggc ggcggtctgg gccatcgcct cgatgatcag cacgccgggc
     3901 atcaccggcc gctgcgggaa atggccctgg aagaagggct cgttgatggt gacgttcttg
     3961 acgccgaccg cgctttggtc ggccaccacg tcgatgacct tgtccaccat caggaacgga
     4021 tagcggtgcg ggatcatctg catgatccgg ttgatgtcga tcacgttcga gcgctcagct
     4081 tcgctcatca tcccctctca gactctcggc ccttcttgcg ggcaagcttg cttaggacag
     4141 cgcattggcg cagccattcg gtcatcggca cggcaggcgc gccgccgacg gtttcccctg
     4201 gcccgacgtc gcgcatcagc ccggaccggg cggcgatgcg ggcgccggaa ccgatcttca
     4261 gatggccggc gatgccggct tgaccgccgg ccgcgacgaa atcgcccagc ttggtcgaac
     4321 cggaaatgcc cacctgggac acgatcacgc aaccgcgtcc catctgcacg ttgtgcccaa
     4381 tctggaccag attatcaatc atcgagccgg cgccgatcac ggtatccggg ccagcgcccc
     4441 ggtcgatggt acagttggcg ccgatctcga cgtcgtcacc gatcaccacg cggcccaatt
     4501 gcggcatttt caaatggcct tgcggcccca tggcgaaacc gaagccgtcc tggccg
//
LOCUS       DATIKR010000339         1669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_235004, whole genome shotgun sequence.
ACCESSION   DATIKR010000339 DATIKR010000000
VERSION     DATIKR010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235004"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..>1669
                     /locus_tag="VLL76_05360"
     CDS             133..>1669
                     /locus_tag="VLL76_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aldolase/short-chain dehydrogenase"
                     /protein_id="HSV28960.1"
                     /translation="MKSRWSDADAKAYVANYAEQGVNEDLALRVYTTRLLGGDPRLVL
                     HGGGNTSVKTTVKDLLGDDVPVLCVKGSGWDMGNIEPAGLPAVRMAELGKLRRLDALS
                     DEDMVNFQRGNLIDSTSPNPSVETLLHAFLPHKFIDHTHSTAVLSVTDQPDGEEQCRA
                     LYGKRMGYVPYIMPGFALAKKAAEVFEQDPSVEGLILLKHGIFTFGATAREAYERMIE
                     FVSMAEDRLQQNRKSVFAPAKLPKQPAALSDIAPIVRGLLAIGQGDGAFKRWVLDFRT
                     SDAIRNYVDGEEVARYSQVGVVTPDHTIRTKNWPVVLPAPEAGKLEEWSKAAAEAVDA
                     YVARYHAYFERNNVRANPKKTELDPMPRVVLVPGVGLFGVGASKKDAAIASDIAENTV
                     ESVTDAEAIGTYQPVTEADMFDCEYWSLEQAKLGKGAEKALARQVAVVTGGGSGIGAA
                     TAKAFAKEGCEVAVLDLDEGAAKRVAKEIGGKALGLACDVTDPASVRAAFDEVCAHFG
                     GVDI"
BASE COUNT          291 a          578 c          552 g          248 t
ORIGIN      
        1 actccctgga ttgcgtggaa accgcaacat gggggtgcgg gccggcgcgt cgaagcctgt
       61 cttagggctt gggccgggag ttgattttgc ctatacatgc cagcgcatgt tccaaacccg
      121 gatgaggtcg tgatgaaatc ccgctggtcc gacgccgacg ccaaggctta cgtcgccaat
      181 tacgccgaac agggcgtcaa cgaagacctg gcgcttcgcg tctacaccac ccgcctgctg
      241 ggcggcgatc cgcgcctggt gctgcatggt ggcggcaaca cgtcggtcaa gaccacggtc
      301 aaggacctgc tgggcgacga cgtgccggtg ctgtgcgtca agggctcggg ctgggacatg
      361 ggcaacatcg agcccgccgg cctgcccgcc gtgcgcatgg ccgaactggg caagctgcgc
      421 cgcctcgacg ccctgtccga cgaggacatg gtgaacttcc agcgcggcaa cctgatcgat
      481 tcgaccagcc ccaacccgtc ggtcgagacg ctgctgcacg ccttcctgcc gcacaagttc
      541 atcgaccaca cccattccac cgccgtgctg tcggtcaccg accagcccga cggcgaggag
      601 cagtgccgcg cgctgtacgg caagcgcatg ggctatgtgc cctacatcat gccgggcttc
      661 gcgctggcca agaaggcggc cgaggtgttc gagcaggacc cgagtgtcga gggcctgatc
      721 ctgctgaagc acggcatctt caccttcggc gcgacggcgc gcgaggccta tgagcggatg
      781 atcgagttcg tctccatggc cgaagaccgc ctgcagcaaa accgcaagtc cgtgttcgcg
      841 cctgccaagc tgcccaagca gccggccgca ttgtccgaca ttgcccccat cgtgcgcggc
      901 ctgctggcca tcggccaggg cgacggcgcg ttcaagcgct gggtgctgga cttccgcacc
      961 tcggacgcca tccgcaacta cgtggacggc gaagaggtcg cccgctattc ccaggtcggc
     1021 gtcgtcaccc ccgaccacac catccgcacc aagaactggc cggtggtgct gcccgccccc
     1081 gaggccggca agctggagga gtggagcaag gcggcggccg aggcggtcga tgcctatgtc
     1141 gcccgctacc atgcctattt cgagcgcaac aacgtccgcg ccaatcccaa gaagaccgaa
     1201 ctcgacccca tgccgcgcgt ggtgctggtc cccggtgtcg gcctgttcgg cgtgggcgcc
     1261 agcaagaagg atgccgccat cgcctcggac atcgccgaga acacggtgga aagcgtcacc
     1321 gacgccgagg ccatcggcac ctaccagccg gtgaccgagg ccgacatgtt cgactgcgaa
     1381 tactggagcc tggagcaggc caagctgggc aagggcgccg agaaggcgct ggcccgccag
     1441 gtcgcggtgg tcaccggcgg cggctcgggc atcggcgccg ccaccgccaa ggccttcgcc
     1501 aaggaaggct gcgaggtcgc ggtgctcgac ctcgacgagg gcgccgccaa gcgcgttgcc
     1561 aaggaaatcg gcggcaaggc cctgggcctg gcctgcgacg tcaccgaccc ggccagcgtg
     1621 cgcgccgcct tcgacgaagt ctgcgcccat ttcggcggcg tcgacatcg
//
LOCUS       DATIKR010000340         7995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_90173, whole genome shotgun sequence.
ACCESSION   DATIKR010000340 DATIKR010000000
VERSION     DATIKR010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 7995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7995
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90173"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="VLL76_05365"
     CDS             <1..583
                     /locus_tag="VLL76_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV28961.1"
                     /translation="ELEKAMPDNAMVTTDIGNICSLANSHLRFKQPNSFFAAMSFGNC
                     GYAFPTVMGCKVARPDRPAIAYVGDGAWGMSLQETLTCVRENIPVVAVVFNNGQWGAE
                     KKNQIDYYANRFIGTNLQNPSFAQVAQAMGADGIRADHPDQVGDALRQAAASGRPTIL
                     ELMVTQALGEPFRRDALKKPARMLEKYEAYSVA"
     gene            585..1556
                     /locus_tag="VLL76_05370"
     CDS             585..1556
                     /locus_tag="VLL76_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010486521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional enoyl-CoA hydratase/phosphate
                     acetyltransferase"
                     /protein_id="HSV28962.1"
                     /translation="MPFHFASPESLVAKARELGRLPIAVAAAGSAFALEGARRAYEQG
                     IADPVLVGDPATIERIAREIRWPIEGIRIVAADDDEDAAQRAVALARSGECGAMMKGH
                     LHTDVLMLAALDKKAGLRTGRRFSHAFHMTVPNWQRSLFLSDCAVNISPNVDTKLDIV
                     RNLVDLIHALGNDAPKIALLSATEEVTERIQSSMDAAEVTRRCAEGAVTGATVFGPLA
                     FDVAMSEEAARIKGIDNPVAGHADALVVADIDSGNALFKMMVHFMGATAAGVVLGALV
                     PIVLTSRSDPPQARLTSTAIARLLAAEHQPLRPRATPIHTQTEGHHA"
     gene            1549..2532
                     /locus_tag="VLL76_05375"
     CDS             1549..2532
                     /locus_tag="VLL76_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV28963.1"
                     /translation="MRKPLRLAVTVVAAAGCLALGSPLGAQEKYPSRPIEVIVTFGPG
                     GGADLMGRQVSRLAEPILGVPMPVANISGASGNAGLTRLLTSPPDGYQVATLIALSVS
                     SWAAGLGTAKPDDFKVVAMMQNSPSMLFVPKNSPYKTAQEFLDAAKANPGKLRVATSG
                     LGTQDDITVRYMASKGVTTKNVPFAKPAERYASTVGGHTDALYEEPGDVAQFIKSGDL
                     RPLIVFDKERHESFPDVVASTEVGLDITDLPNFRTIAVPAKTPDAVVQTLANAMNQVL
                     DKPEWQQFCKDTFTCTDKMSPKEAQQVVANFYTTVQGYLKQFSEDQQQSKR"
     gene            2537..3073
                     /locus_tag="VLL76_05380"
     CDS             2537..3073
                     /locus_tag="VLL76_05380"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSV28964.1"
                     /translation="MNRTARLIRQAAVPALFLVAALILPRYILPSPEMADLAGEGAGP
                     TLWPSTMLILIAVCAFLWLVGIVVTNLRNPRPEVGEPAEKAPYNAKLAWAGVALTFVY
                     GYAIQQLGFAIATLIFLALWFILGGVRRPVTVGPVAVLGTLVLLWVFVALAQMPLDRG
                     RGVFTAATDEIYDAIGIY"
     gene            3083..4600
                     /locus_tag="VLL76_05385"
     CDS             3083..4600
                     /locus_tag="VLL76_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV28965.1"
                     /translation="MEVFDLIASGFAGAFQPINFMVLVIGLLVGVIAGALPGVSFVNA
                     MAMALPFTYLMEPVEAMAFLGGIYAGGVFGGSISSILINIPGTPASLPACWDGYPMTK
                     KGQSKRALAIAVTASATGGVVSALLLTFLSPPFASFALRFDQPEFFAATILGLISVIA
                     IAKDQPVISMLSMFIGMVIGTIGVDPVYGLPRFGFGVSDLQSGINFTVVMIGLFAVGE
                     VVDLIAAKPDLAVKREVKGGTGFSLRDVWKVKGAIGRGTGIGCMIGVIPGAGATVGAV
                     IAYGVEKQASGRGREFGTGVEQGLAAPESAKNATTGAAMIPLLTLGIPGSAATAIMLA
                     AMMLHGVNPGPLLFTGNVKMVYTIFASMILANLLMILAAVFVARGFSTLMRTPPAILG
                     AFIIVLSIVGAYGVRNNFFDVWVCLAFGALGYIMKRTGFPSAPLVLGVILGPLAERYF
                     LTSLANYADNYLIFFQRPISATILGLAFLFALWSMWPVVQPLFSGLQRKERKGVS"
     gene            4597..6024
                     /locus_tag="VLL76_05390"
     CDS             4597..6024
                     /locus_tag="VLL76_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018306197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV28966.1"
                     /translation="MTTPSPKPREEMGQEAKTVAEVVERARRAHRTFCNASQERADEA
                     VTAIAWALYKPENARAMAELAVEDTGLGNVEDKVIKNQRKTFGTLRDLMRVKSVGIIE
                     EDKAKGIVKYAKSMGVVAAVTPSTNPSATPVNKAMMALKGRNAVIISPSPSGLTATTR
                     TVELMRDALAKVNLPQDLVQVLPGASKAMTEALMKAVDLVVVTGSQNNVRAAYSSGTP
                     AIGVGAGNVPVIIDETADLDEAASKIQQSKCFDNSTSCSSENSVVIVDAVYDDAIEAM
                     RRAGGWMAGPEDRQKIQDALFQGGKLSRDLIARDARVFAETVGLPDDAKNARFFMVEE
                     TGVGKQHPFSGEKLSLVLAVYRAKDFPAARERVREILNFQGRGHSCGIHTKDLDRARN
                     LAEELDVVRVLVNFPHTFGNGGGFNSGLNFTLSMGCGTWGKNSITENLSYKHFLNITH
                     LVTPIPEDKPSEEELFGKLWEKYGK"
     gene            6032..7156
                     /locus_tag="VLL76_05395"
     CDS             6032..7156
                     /locus_tag="VLL76_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSV28967.1"
                     /translation="MNFAEYAGKKVLADAGLPTTRGRLATSPEEAEQIAREIGPVVVK
                     AQVPTGKRGKSGGVKVVDSPEQAAQAAAAIIGMDIGGHRVEQVLVEEKADIRREFYAA
                     VLDDPISKGPLIMFSTEGGMDIEEVAAQRPEAIRRATPDIRAGFDHQAAREMIAGLDV
                     PESTAGFLADLYRVWRDRDAELVEINPLAELSDGRLVALDCKLVLDDSSLFRQSDIAD
                     QGAPERMTELEQKGKDLGLKYIELEGNVGVLANGAGLTMTTMDVISHFGGKPANFLEI
                     GGEAYTKATPALELVLSNPGVKSLIINFCGAFARTDVMAEGVVRAWLDLRPNLPAFFS
                     IHGTNEDEAITLVRDRLGFEPYDRMEDAVKAAVEAAHDRA"
     gene            7143..>7995
                     /gene="sucD"
                     /locus_tag="VLL76_05400"
     CDS             7143..>7995
                     /gene="sucD"
                     /locus_tag="VLL76_05400"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020494566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HSV28968.1"
                     /translation="MIVHDTDRVLVQGITGKQGTFWTEQMQAYGTNVVGGVNPKRAGE
                     THCNVPVYATAKEAAKDGDIDVSVMFIPPAAALAAAEDAIAAGVKTLVILTEHIPSHD
                     VMCIHAAAREAGTRIVGPNTAGLVTPGECFVGIMPAFNDRVFKRGTVGVISRSGSLGT
                     LICLNLVQQGFGESAFIGIGGDPMIGTTSRDALEALDRDDRTEAVVLVGEIGGGLEEE
                     AAEYAATMRKPVVSFIAGAASPPGKKMGHAGAIVSRGKGTAEAKMTALRKAGAQVGNN
                     PTEAGELM"
BASE COUNT         1367 a         2810 c         2560 g         1258 t
ORIGIN      
        1 cgagctggaa aaggccatgc cggacaacgc catggtcacc accgacatcg gcaacatatg
       61 ttcgctggcc aacagccatc tgcgcttcaa gcagcccaac agcttcttcg ccgccatgag
      121 cttcggcaat tgcggctatg ccttccccac cgtcatgggc tgcaaggtgg cgcggcccga
      181 ccgcccggcc atcgcctatg tgggcgacgg cgcctggggc atgagcctgc aggagaccct
      241 gacctgcgtg cgcgagaaca tccccgtcgt cgcggtggtg ttcaacaacg gccagtgggg
      301 cgccgagaag aagaaccaga tcgactatta cgccaaccgc ttcatcggca ccaacctgca
      361 aaaccccagc ttcgcccagg tggcccaggc catgggcgcc gacggcatcc gcgccgatca
      421 tcccgaccag gtgggcgacg cgctgcgcca ggcggcggcg tcgggccggc cgaccatcct
      481 ggaactgatg gtgacgcagg ccctgggcga gccgttccgc cgtgacgcgc tgaagaagcc
      541 ggcgcgcatg ctcgaaaagt acgaagccta ttcggtcgca tgacatgcct tttcacttcg
      601 ccagtcccga aagccttgtc gccaaggcgc gcgagttggg gcggctgccg atcgcggtag
      661 ccgccgccgg ctcggccttc gcccttgagg gggcgcgccg cgcctatgaa caggggatcg
      721 ccgaccccgt gctggtgggc gaccccgcca ccatcgagcg gatcgcccgc gaaatccgct
      781 ggccgatcga gggcatccgc atcgtcgccg ccgacgacga cgaggacgca gcccagcgtg
      841 ccgtcgccct ggcccgctcg ggcgaatgcg gcgccatgat gaagggccat ttgcacaccg
      901 acgtgctgat gctggcggca ctggacaaga aggccggcct gcgcaccggc cgccgcttca
      961 gccacgcctt ccatatgacc gtgcccaatt ggcagcgcag cctgttcctg tcggattgcg
     1021 ccgtcaacat ctcgcccaat gtggacacca agctcgacat cgtccgcaac ctggtcgacc
     1081 tgatccacgc cttgggcaat gacgccccca agatcgccct gctgtcggct accgaggaag
     1141 tcaccgagcg catccagtcg tccatggacg ccgccgaggt gacccgccgc tgcgccgagg
     1201 gcgcggtgac cggcgccacc gtgttcggcc cgctggcctt cgacgtcgcc atgtccgagg
     1261 aagcggcccg catcaagggc atcgacaacc cggtcgccgg ccatgccgac gcgctggtgg
     1321 tggccgacat cgattccggc aacgccctgt tcaagatgat ggtccacttc atgggcgcga
     1381 ccgccgccgg cgtggtgctg ggcgctttgg tgcccatcgt gctgacatcg cgctcggacc
     1441 cgccgcaggc ccgcttgacc tcgaccgcca tcgcccgcct gctcgccgcc gagcaccagc
     1501 cgttgcggcc gcgtgcgacc ccgatccaca cccagacgga gggacatcat gcgtaagccg
     1561 ttgcgccttg ccgtgactgt cgtcgccgcc gccggctgcc tggcattggg cagccccctc
     1621 ggcgcgcagg agaaatatcc ctcccgcccc atcgaggtga tcgtcacctt cggccccggc
     1681 ggtggcgccg atctgatggg ccgccaggtg tcgcggctgg ccgagccgat cctgggcgtg
     1741 cccatgccgg tcgccaacat ctcgggcgcc tcgggcaatg ccggcctgac ccggcttttg
     1801 accagcccgc ccgacggcta tcaggtcgcc accctgatcg ccctgtcggt gtcgtcctgg
     1861 gccgccggcc tgggcaccgc caagcccgac gacttcaagg tcgtcgccat gatgcagaac
     1921 tcgccgtcca tgctgttcgt ccccaagaac agcccctaca agacggcgca ggaattcctc
     1981 gacgccgcca aggccaatcc cggcaagctg cgcgtcgcca cctcgggcct gggcacccag
     2041 gacgacatca ccgtgcgcta catggcgtcg aagggcgtga ccaccaagaa cgtccccttc
     2101 gccaagccgg ccgagcgcta tgcctcgacc gtcggcggcc acaccgacgc gctctacgag
     2161 gagccgggcg acgtggccca gttcatcaag tcgggcgacc tgcggccgct gatcgtgttc
     2221 gacaaagagc gccacgaatc cttccccgac gtcgtcgcct cgaccgaggt gggcctcgac
     2281 atcaccgacc tgcccaactt ccgcaccatc gcggtgccgg ccaagacccc cgacgccgtc
     2341 gtacagaccc tggccaacgc catgaaccag gtgctcgaca agccggaatg gcagcaattc
     2401 tgcaaggaca ccttcacctg caccgacaag atgagcccca aggaggcgca gcaggtggtg
     2461 gcgaatttct atacgaccgt ccagggctat ctgaagcagt tcagcgagga ccagcagcag
     2521 agcaagaggt gaggccatga accgcacggc ccggctgatc cggcaggcgg cggtgccggc
     2581 cctgttcctg gtcgcggcgc tgatcctgcc ccgctacatc ctgccatctc ccgagatggc
     2641 ggatctggcg ggcgagggtg ccgggccgac cctgtggccc agcacgatgc tgatattgat
     2701 cgcggtctgt gccttcctgt ggctggtggg aatcgtggtg accaatctgc gcaatccccg
     2761 cccggaggtc ggcgagcccg cggagaaggc accttacaat gccaaactgg cctgggccgg
     2821 cgtggccctg accttcgtct acggctacgc catccagcaa ttgggcttcg ccatcgccac
     2881 cctgatcttc ctggccctgt ggttcattct gggcggcgtc cgccgcccgg tgaccgtggg
     2941 gccggtggcg gtgctgggga ccctggtgct gctgtgggtg ttcgtcgcgc tggcccagat
     3001 gccgctggat cgcggccggg gcgtgttcac tgccgcgacg gacgagatct acgacgccat
     3061 cggcatctat tgaggtctcg ccatggaagt gttcgacctg atcgcaagtg gcttcgcagg
     3121 cgccttccag cccataaact tcatggtgct ggtcatcggc ttgttggtcg gcgtcatcgc
     3181 cggcgccctg cccggcgtgt cgttcgtcaa cgccatggcc atggcgttgc ccttcaccta
     3241 tctgatggaa ccggtcgagg ccatggcatt cctcggcggc atctatgccg gcggcgtgtt
     3301 cggcggctcg atctcgtcca tcctgatcaa catccccggc acgcccgcgt cgcttcccgc
     3361 ctgctgggac ggctatccca tgacgaagaa gggccagtcc aagcgggcgc tcgccatcgc
     3421 cgtcaccgcc tcggccaccg gcggcgtggt cagcgccttg ttgctgacct tcctgtcacc
     3481 gcccttcgcc agcttcgccc tgcgcttcga ccagccggaa ttcttcgcgg ccaccattct
     3541 cggcctgatc tcggtgatcg ccatcgccaa ggaccagccg gtcatcagca tgctatccat
     3601 gttcatcggc atggtcatcg gcaccatcgg cgtcgatccc gtctacggcc tgccccgctt
     3661 cggcttcggc gtgtccgact tgcaaagcgg catcaacttc accgtggtga tgatcggcct
     3721 gttcgcggtc ggcgaagtcg tggacctgat cgccgccaag cccgaccttg ccgtcaagcg
     3781 cgaggtcaag ggcggcacgg gcttttcgct gcgcgacgta tggaaggtca agggcgccat
     3841 cggtcgcggc accggcatcg gctgcatgat cggggtgatt ccgggagctg gcgccactgt
     3901 gggcgcggtg atcgcctatg gcgtcgagaa gcaggcttcc ggccgtggcc gcgagttcgg
     3961 caccggtgtc gagcagggct tggccgcccc cgaatcggcc aagaacgcca ccaccggcgc
     4021 cgccatgatc ccgcttctga ccctgggcat cccgggcagc gccgccaccg ccatcatgct
     4081 ggcggccatg atgctgcacg gcgtcaaccc cgggccgctg ctgttcaccg gcaacgtcaa
     4141 gatggtctac accatcttcg ccagcatgat cctggccaac ctgctgatga tccttgccgc
     4201 agtgttcgtg gcgcgcggct tctcgaccct gatgcggacg ccgccggcca tcctgggcgc
     4261 cttcatcatc gtgctgtcca tcgtcggcgc ctatggcgtg cggaacaact tcttcgacgt
     4321 ctgggtttgc ctggcattcg gagcgctcgg ctacatcatg aagcggaccg gctttccgtc
     4381 ggcgccgctg gtcctgggcg tgatcctggg gccgctggcc gagcgctact tcctgacgtc
     4441 gctggccaat tatgccgaca actacctgat cttcttccaa cgccccatca gcgccaccat
     4501 cctgggcctc gccttcctgt tcgcgctctg gtcgatgtgg ccggtggttc agccgctgtt
     4561 cagcgggctg caacgaaaag aaaggaaagg cgtgtcatga ccactccctc tcccaagccc
     4621 cgcgaggaaa tgggccaaga agccaagacc gtcgccgagg tcgttgaacg ggcgcggcga
     4681 gcccaccgga ccttctgcaa cgccagccag gaacgcgccg acgaggcggt caccgccatc
     4741 gcctgggcgc tgtacaagcc cgagaacgcg cgggccatgg cagaactggc ggtcgaggac
     4801 accggcctgg gcaatgtcga ggacaaggtc atcaagaacc agcgcaagac cttcgggacc
     4861 ctgcgcgacc tgatgcgggt gaaatccgtc ggcatcatcg aggaagacaa ggcaaagggc
     4921 attgtcaaat acgccaagtc catgggcgtg gtcgccgccg tgacgccgtc caccaacccg
     4981 tcggcgacgc cggtcaacaa ggcgatgatg gcgctgaagg gccgcaacgc ggtcatcatc
     5041 tcgccctcgc cgtccggcct gacggccacc acccgcaccg tcgagttgat gcgcgacgcc
     5101 ttggccaagg tcaacctgcc gcaggatctg gtgcaggtgc tgcccggcgc gtccaaggcc
     5161 atgacggaag cgctgatgaa ggcggtggac ttggtggtgg tgaccggctc gcagaacaac
     5221 gtgcgcgccg cctattccag cggcaccccg gccatcggcg tcggcgccgg caacgtcccc
     5281 gtcatcatcg acgagaccgc cgatctggac gaggccgcca gcaagatcca gcaatccaaa
     5341 tgcttcgaca attccacatc gtgctcgtcg gagaattcgg tggtgatcgt cgatgccgtc
     5401 tatgacgacg ccatcgaggc catgcgccgc gccggcggct ggatggcggg tcccgaggac
     5461 cgccagaaga tccaggacgc gctgttccag ggcggcaagc tcagccgcga cctgatcgcc
     5521 cgcgacgccc gcgtgttcgc cgaaacggtc ggcctgcccg acgacgccaa aaacgcccgc
     5581 ttcttcatgg tcgaggaaac cggggtgggc aagcagcacc cgttctcggg cgagaagctg
     5641 tcgctggtgc tggcggtcta ccgcgccaag gacttccccg ccgcccgcga gcgcgtgcgc
     5701 gagatcctga acttccaggg ccgcggccat tcctgcggca tccacaccaa ggacctcgac
     5761 cgcgcccgca acctcgccga ggagctggac gtggtgcgcg tgctggtcaa cttcccccac
     5821 accttcggca atggcggcgg cttcaacagc ggcttgaact tcacgctgtc catgggctgc
     5881 ggcacctggg gcaagaattc gatcaccgag aacctcagct acaagcattt cctcaacatc
     5941 acccacctcg tcaccccgat ccccgaggac aagccgagcg aggaagagct gttcggcaag
     6001 ctgtgggaaa aatacggcaa gtgagggcgc catgaacttc gctgaatacg caggcaagaa
     6061 ggtgttggcc gatgccggtc tgcccaccac gcgcggccgg ctggcgacct cgcccgaaga
     6121 ggccgagcag atcgcgcgcg agatcggacc ggtggtggtc aaggcccagg tgcccaccgg
     6181 caagcgcggc aagtcgggcg gcgtcaaagt ggtggacagc ccggaacagg ccgcccaggc
     6241 ggcggccgcc atcatcggca tggacatcgg cggccatcgc gtcgagcaag tgctggtcga
     6301 ggaaaaggcc gacatccggc gcgagttcta tgccgccgtg ctggacgatc cgatcagcaa
     6361 gggaccgctg atcatgttct cgaccgaggg cggcatggac atcgaggagg tggcggccca
     6421 gcggcccgag gccatccgcc gcgccacccc cgacatccgc gccggcttcg accatcaggc
     6481 ggcgcgcgag atgatcgccg gcctcgacgt gcccgaatcc accgccggct tcctggccga
     6541 cctttaccgg gtgtggcgcg accgcgacgc cgagctggtc gagatcaacc cgctggccga
     6601 attgagcgac ggccggctgg tggcgctgga ctgcaagctg gtgctggacg attccagcct
     6661 gttccgccag tccgacatcg ccgaccaggg cgcccccgag cgcatgaccg agcttgagca
     6721 aaagggcaag gacctgggcc tcaaatacat cgagctggaa ggcaatgtcg gcgtgcttgc
     6781 caacggcgcc ggcctgacca tgaccaccat ggacgtgatc agccatttcg gcggcaagcc
     6841 cgccaacttc ctggagattg gcggcgaggc ctacaccaag gcgacgccgg cgctggaact
     6901 ggtgctgtcc aatcccggcg tcaaaagcct gatcatcaat ttctgcggcg ccttcgcccg
     6961 caccgacgtg atggccgagg gcgtggtgcg ggcctggctg gacctgcgtc ccaacctgcc
     7021 ggccttcttc tcgatccacg gcaccaacga ggacgaggcc atcacgctgg tgcgcgaccg
     7081 cctgggcttc gagccctatg accgcatgga agacgccgtg aaagcggcgg tggaggcagc
     7141 ccatgatcgt gcatgacacc gaccgcgtcc tggtccaggg catcaccggc aagcagggaa
     7201 ccttctggac cgagcagatg caggcctacg gcaccaacgt cgtgggcggg gtcaacccca
     7261 agcgggccgg cgaaacccat tgcaacgtgc cggtctacgc caccgccaag gaggccgcca
     7321 aggacggcga catcgacgtc tcggtgatgt tcatcccgcc cgcggccgcc ctggccgccg
     7381 ccgaggacgc catcgccgcc ggggtcaaga cgctggtcat cctgaccgag cacatcccca
     7441 gccacgacgt catgtgcatc cacgccgccg cccgcgaggc cggcacccgc atcgtcggcc
     7501 ccaacaccgc cggactggtg acgcccgggg aatgcttcgt cggcatcatg ccggccttca
     7561 acgaccgcgt gttcaagcgt ggaacggtgg gggtgatctc gcgctcgggc agcctgggca
     7621 ccctgatctg cctcaacctg gtgcagcagg gcttcggcga gtccgccttc atcggcatcg
     7681 gcggcgaccc catgatcggc accaccagcc gcgacgccct ggaagcgctg gaccgcgacg
     7741 accgcaccga ggcggtggtg ctggtgggcg agatcggtgg cgggctggag gaggaagcgg
     7801 cggaatacgc cgcgaccatg cgaaagccgg tggtgtcgtt catcgccggc gccgcctcgc
     7861 cgcccggcaa gaagatgggc catgccggcg ccatcgtcag ccggggcaag ggcaccgccg
     7921 aggccaagat gaccgccctg cgcaaggccg gggcccaagt gggcaacaac cccaccgagg
     7981 ccggcgagct catgg
//
LOCUS       DATIKR010000341         4085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_65954, whole genome shotgun sequence.
ACCESSION   DATIKR010000341 DATIKR010000000
VERSION     DATIKR010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4085
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65954"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VLL76_05405"
     CDS             <1..341
                     /locus_tag="VLL76_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28969.1"
                     /translation="ATRASKLPPPFKARITAHIDEVLERFLKEEQIVERLDHHESPLR
                     DRAMRLVQFCASGVLPPGKALALARERVVALLRQPDFDARFAEGIADGDLAQRSLRDF
                     HALLTKAGFA"
     gene            complement(372..710)
                     /locus_tag="VLL76_05410"
     CDS             complement(372..710)
                     /locus_tag="VLL76_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004581046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin-associated ferritin-like protein"
                     /protein_id="HSV28970.1"
                     /translation="MAEELHAPYQKLSRKTITMHQAIRSLMEELEAVDWYRQRADDCT
                     DPDLREVLLHNMREEIEHASMVLEWLRRNDADFDGQLRTYLFSKGPITEIEEETDAPG
                     GRSDPSRTTE"
     gene            complement(758..2785)
                     /locus_tag="VLL76_05415"
     CDS             complement(758..2785)
                     /locus_tag="VLL76_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HSV28971.1"
                     /translation="MTGKTPSLPRAAALVGPFASGKTSLLEALLFRAGTVPRQGRIKD
                     GTTFGDSSPEARARQMSVEPNVASAEYLGEKWTFVDCPGSVEFQQDAYNALMAVDAAL
                     VVCEPDPARAVMVAPLLKFLDERKIPHLLFVNKMDAGDVRLKETLEALQAVSDRPLVL
                     REIPIREGDKVVGFVDLVSERAYKYRPGQTSDLIKIPDTIKAEEQSARQEMLEHLADF
                     DDHLMEELLEDVAPPNDEVYGDLAKDLADDLIVPVFFGSAEADAGITRLWKALRHEVP
                     QPAATAARLGVAAEGAPLARVFKTVHAAHTGKLSFARVFRGEFADGQAVEGGRISGLF
                     AMTGGTQAKIAKAGPGDVVAFGKLDAVATGDLVGAKDAAADWPHPLEPLFGLALSAEK
                     KGDEVKLTGALAKLVEEDPSYRLENNAEFGELVLWGQGEIHLATALDRLKSRYNMAVT
                     TRKPTVPYKETIRKPAAVHGRHKKQSGGHGQFGDVHIEIRPQPRGAGFAFEDKIVGGV
                     IPKQYIPAVEEGVREFLVRGALGFPVVDLAVTLTQGSFHSVDSSDMAFKTAARIAMAE
                     GLPQCEPILLEPILLVDISVPSDYTAKAQRIVTGRRGQILGYDAREGWAGWDTVSAYL
                     PQSEMGDLIIELRSLTMGVGSFTWKFDHLQELTGRPAQQVIEQRKEALAHA"
     gene            complement(2916..3281)
                     /locus_tag="VLL76_05420"
     CDS             complement(2916..3281)
                     /locus_tag="VLL76_05420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28972.1"
                     /translation="MDNIRRCAELSVGRGCAFALLAVFTFAVGLSWEPILAIRSSAIL
                     LTLTAVVLWHRAQFAHEVHYRRREVWLLMGRTHSLPEDRAHGVISNIMREVYLRWSRR
                     FAAPALACWTVELAVRAVG"
     gene            complement(3319..3615)
                     /locus_tag="VLL76_05425"
     CDS             complement(3319..3615)
                     /locus_tag="VLL76_05425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28973.1"
                     /translation="MNPRVMMIAVLAMSALAGFTSPALLWVYSLAGFWLPDFMATPAF
                     ALYGTSLIVSVSVLLLAGVPAAVFERVTGRGETDMSSMAIWLVGAGLLTLPGML"
     gene            complement(3612..3935)
                     /locus_tag="VLL76_05430"
     CDS             complement(3612..3935)
                     /locus_tag="VLL76_05430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28974.1"
                     /translation="MENKDFVFGYLPFWIVTYGTAVVAWSCVGRFLLEMIVPPQSSNY
                     ILKWFQRLTNWAIRLTKLVTPAFFHTRYLPLITFYWTYVVRFVLTTWLLTQGMVPAIT
                     QGAAP"
BASE COUNT          690 a         1342 c         1406 g          647 t
ORIGIN      
        1 tggcgacccg ggccagcaag ctgccgccgc cgttcaaggc gcgcatcacc gcccatatcg
       61 acgaggtgct cgagcgcttc ctgaaggaag agcagatcgt cgaacgcctg gaccatcacg
      121 aaagcccgct gcgcgaccgc gccatgcggc tggtccaatt ctgcgcctcg ggcgtgctgc
      181 cgccgggcaa ggccctggcc ctggcgcgcg aacgcgtcgt cgccctgctg cgccaacccg
      241 atttcgacgc ccgcttcgcc gaaggcatcg ccgacggcga tctggcccag cgcagcctgc
      301 gcgacttcca cgccttgctg accaaggcgg gattcgcttg agaagataat gcgcccgcga
      361 cgcgcggcaa ttcattccgt cgtccggctg gggtccgacc ggccgccggg ggcgtccgtt
      421 tcttcctcga tctcggtgat gggacccttg ctgaacaagt aggtgcgaag ctggccgtcg
      481 aagtcggcat cgttgcggcg cagccattcc agcaccatgg aggcgtgctc gatctcttcg
      541 cgcatgttgt gcagcaggac ttcacgcaaa tcggggtcgg tgcaatcgtc ggcgcgctgg
      601 cggtaccaat ccaccgcctc cagttcctcc atcaacgagc ggatggcctg gtgcatggtg
      661 atggtcttgc ggctgagctt ttggtaaggc gcgtgcagct cttcggccat gaaaaatccc
      721 cgggacgtgg tgacgtcccg gggatgtggg gatgacctca ggcgtgcgcc agcgcttcct
      781 tgcgctgctc gatcacctgc tgcgccgggc ggccggtcag ttcctgcaga tggtcgaact
      841 tccaggtgaa gctgccgacg cccatggtca gcgagcgcaa ctcgatgatc aggtcgccca
      901 tttccgattg cggcagatag gccgacacgg tgtcccagcc ggcccagccc tcgcgggcgt
      961 catagcccag gatctggccg cggcggccgg tgacgatgcg ctgcgccttg gcggtgtagt
     1021 cgctgggcac cgagatatcg accagcagga tgggctccag caggatcggc tcgcactggg
     1081 gcaggccctc ggccatggcg atgcgggcgg cggtcttgaa cgccatgtcc gagctgtcca
     1141 ccgagtggaa gctgccctgg gtcagggtca ccgccagatc caccaccggg aaacccaggg
     1201 cgccgcgcac caggaattcg cgcacgcctt cctcgaccgc cgggatgtat tgcttgggga
     1261 tgacgccgcc gacgatcttg tcctcgaacg cgaagccggc gccgcgcggc tgcggccgga
     1321 tctcgatgtg gacgtcgccg aactggccgt ggccgcccga ctgcttcttg tggcggccgt
     1381 gcacggcggc gggcttgcgg atggtctcct tgtagggaac cgtcggcttg cgggtcgtga
     1441 ccgccatgtt gtagcggctt ttcaggcggt cgagcgcggt ggcgaggtgg atctcgccct
     1501 ggccccacag caccagctcg ccgaactcgg cgttgttctc caggcgatag gacgggtcct
     1561 cctcgaccag cttggccaag gcgccggtca gcttgacctc gtcgcccttc ttctcggccg
     1621 acagcgccag gccgaacaga ggctccagcg ggtgcggcca atcggcggcg gcatccttgg
     1681 cgccgaccag gtcgccggtg gcgacggcgt ccagcttgcc gaacgccaca acgtcgccgg
     1741 ggccggcctt ggcgatcttg gcctgggtgc cgccggtcat ggcgaacagg cccgagatgc
     1801 ggccgccctc gaccgcctgg ccatcggcga actcgccccg gaagacgcgg gcgaatgaca
     1861 gcttgccggt gtgggcggca tgcacggtct tgaacacgcg ggccagcggc gcaccctcgg
     1921 cggccacgcc caggcgggcg gcggtggcgg cgggctgcgg cacctcgtgg cgcagggcct
     1981 tccacagccg ggtgatgccg gcgtcggcct cggccgagcc gaagaacacc ggcacgatca
     2041 ggtcatcggc caggtccttg gcgagatcgc catagacctc gtcgttgggc ggcgccacgt
     2101 cttccagcag ctcttccatc aggtggtcgt cgaaatcggc cagatgctcc agcatctcct
     2161 ggcgcgccga ctgctcctcg gccttgatgg tatcggggat cttgatcagg tcagaggtct
     2221 ggccggggcg gtatttgtag gcgcgctcgc tgaccaggtc gacgaagccg accaccttgt
     2281 cgccctcgcg gatgggaatt tcgcgcagca ccagcgggcg gtcggacacc gcctgcagcg
     2341 cttccagcgt ctccttcagg cggacgtcgc cggcatccat cttgttgacg aacaacaggt
     2401 gcggaatctt gcgctcgtcc aggaacttca acagcggcgc caccatcacg gcgcgggcgg
     2461 ggtcgggctc gcacaccacc agggcggcgt ccacggccat cagcgcgttg taggcatcct
     2521 gctggaattc caccgagccg gggcaatcga cgaaggtcca cttctcgccc aggtattcgg
     2581 ccgaggcgac gttgggctcg acgctcatct ggcgggcgcg ggcctcgggg ctggaatcgc
     2641 cgaacgtggt gccgtccttg atcctgccct ggcgcggcac ggtgccggct cgaaacagca
     2701 gggcttcgag caggctggtc ttgccgctgg cgaaagggcc gaccagggcg gcggcccgag
     2761 ggagggaggg tgtcttgccg gtcattatgc ttcctccaag aactggagcc ccgaagactc
     2821 aatggttcca gttgcaggcc cgactggcaa tagggaatga ccggctgtcc cccctccatt
     2881 ccgggggagg gccatgctaa ccgaacagat tggcctcaac cgaccgcgcg gaccgccagt
     2941 tccaccgtcc agcaggccaa ggcgggggcc gcgaaacgcc gggaccagcg cagatagacc
     3001 tcgcgcatga tgttgctgat cacaccgtgg gcgcggtcct cgggcaggct gtgggtgcgc
     3061 cccatcagca gccagacctc gcgccggcgg taatggacct cgtgggcgaa ctgggcgcgg
     3121 tgccacagca ccacggcggt cagcgtcagc aggatggccg acgagcggat cgccaggatc
     3181 ggctcccacg acagcccgac ggcgaaggtg aagacggcaa gcagggcgaa ggcgcatccc
     3241 ctgccgaccg acaattcggc gcagcggcga atgttgtcca tggcacgtcc ccctagggtg
     3301 acgtgccata gatgggcgct acagcattcc cggcaaggtc agaaggccgg cgccaaccag
     3361 ccatatcgcc atggaagaca tgtcggtctc gccccgcccg gtgacgcgct cgaagaccgc
     3421 cgccggcacg ccggccagca gcagcaccga caccgacacg atcagcgacg tgccgtacag
     3481 cgcaaaggcg ggagtggcca tgaaatcggg cagccagaag ccggccagcg agtagaccca
     3541 cagcagcgcc ggcgaggtga agccggccag ggcgctcatg gccaggacgg cgatcatcat
     3601 gacgcggggg ttcatggcgc ggctccctgg gtgatggccg gcaccatgcc ctgggtcagc
     3661 agccaggtgg tgagcacgaa gcgcacgaca taggtccagt agaacgtgat cagcggcagg
     3721 tagcgggtgt ggaagaaggc cggcgtgacc agcttggtca gccggatggc ccaattggtc
     3781 aggcgctgga accatttcag gatgtagttg gacgattgcg gcggcacgat catttccagc
     3841 aggaaacggc cgacgcacga ccacgccacc acggcggtgc cgtaggtgac gatccagaac
     3901 ggcaggtagc cgaagacgaa atccttgttt tccatgcaat cccgcgaaaa aaaggttcgc
     3961 caggggacaa ttccgcaacg tcatgcgcgg gcttgacccg cgtatccacg tggtgacgtc
     4021 tggcggggtg ccgcctgtaa cgcgtggatg gccgggtcaa gcccggccat gacgacgagg
     4081 aagcg
//
LOCUS       DATIKR010000342         2468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_126287, whole genome shotgun sequence.
ACCESSION   DATIKR010000342 DATIKR010000000
VERSION     DATIKR010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126287"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2468
                     /gene="uvrA"
                     /locus_tag="VLL76_05435"
     CDS             <1..>2468
                     /gene="uvrA"
                     /locus_tag="VLL76_05435"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSV28975.1"
                     /translation="ESIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGV
                     PHSPATGLPIESQTVSQMVDRILDMPEGTRLYLLAPFVRGRKGEYRKELLDLQKKGFQ
                     RVKVDGTLYEIDEVPALDKKKKHDIEVVVDRLVVKAGLGNRLADSVETALGLADGLVI
                     AENADSGDRTTFSAKFACPVSGFTIEEIEPRLFSFNNPFGACPHCDGLGVKLYFDPEL
                     VVPDQDLSLKDGAVAPWANSTSQYYIQALEGLAKHYGFDLYTPWRRLPPKVREVILYG
                     SGDEIVPIRYEDGFRSFTTNKPYEGVINNMSRRYKETDSAWVREELSRFQGTAPCEAC
                     DGARLKPEALAVKIGGLHISQVSEFSIGKARDWYLGLEEQLKPKDREIARRILREIND
                     RLGFLMDVGLDYLTLSRASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRD
                     NDRLLATLKRLRDIGNSVVVVEHDEDAIRTADYLIDMGPGAGIHGGQVVAEGTPDAVM
                     KNPESLTGQYLTGKRGIPLPAARRPGNGNKLTIVGARGNNLQDVTVDIPLGTFTCVTG
                     VSGGGKSTLVIETLYKALARQLMNAREHPTPFDRIEGVQFLDKIIDIDQSPIGRTPRS
                     NPATYTGAFTPIRDWFTELPEAKQRGYKAGRFSFNVKGGRCEACQGDGVIKIEMHFLP
                     DVYVQCDVCKGKRYNRETLEITFRGKSIADVLDMTIEEAADFFKAVPSIRDKMVTLQR
                     VGLDYIHLGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFEDVRKLLE
                     VLHALVEGGNTVLVIEHNLEVIKTA"
BASE COUNT          464 a          858 c          764 g          382 t
ORIGIN      
        1 gagagcatcg agggcctgag ccccgccatc tcgatcgagc aaaagacgac gtcgaagaac
       61 ccgcgttcga ccgtgggcac cgtcaccgaa atctacgact acatgcgcct gctgtgggcg
      121 cgcgtcggcg tgccgcattc gcccgccacc ggcctgccga tcgaaagcca gactgtcagc
      181 cagatggttg acagaatcct cgacatgccc gagggcaccc gcctttacct gctggccccc
      241 ttcgtgcgcg gccgcaaggg cgagtaccgc aaggaattgc tggacctgca gaagaagggg
      301 ttccagcgcg tcaaggtgga cggcaccctg tacgagatcg acgaggtccc cgccctcgac
      361 aagaagaaga agcacgacat cgaggtcgtg gtcgaccgcc tggtggtcaa ggcgggcctg
      421 ggcaaccgcc tggccgattc ggtcgagacc gccctgggcc tggccgacgg cctggtgatc
      481 gccgaaaacg ccgattccgg cgaccgcacc accttctccg ccaagttcgc ctgccccgtc
      541 tcgggcttca ccatcgagga aatcgagcct cggctgttct cgttcaacaa cccgttcggt
      601 gcctgtcccc attgcgatgg cctgggcgtg aagctttatt tcgaccccga actggtggtg
      661 ccggaccagg atctgtcgct gaaggacggc gccgtcgcgc cgtgggccaa ttccaccagc
      721 cagtactaca tccaggcgct ggagggcttg gcgaagcatt acggttttga cctctacacg
      781 ccgtggcgcc ggctgccgcc caaggtgcgc gaggtgatcc tgtacgggtc gggcgacgag
      841 atcgtcccga tccgttacga ggacggattc cgcagcttca ccaccaacaa gccctatgag
      901 ggcgtcatca acaacatgtc gcgccgctac aaggagaccg attccgcgtg ggtgcgcgag
      961 gaattgtccc gcttccaggg caccgccccg tgcgaggcgt gcgacggcgc ccgcctcaag
     1021 cccgaggcgt tggcggtcaa gatcggcggg ctgcacatct cgcaggtgtc ggaattctcc
     1081 atcggcaagg cgcgcgactg gtatctcggc ctggaagagc aattgaagcc caaggaccgc
     1141 gagatcgcgc gccgcatcct gcgcgagatc aacgaccgcc tgggcttcct gatggacgtc
     1201 ggcctcgact atctgactct cagccgcgcc tcgggcaccc tgtcgggcgg cgagagccag
     1261 cgcatccgcc tggccagcca gatcggctcg ggcctgaccg gcgtgctcta cgtgctggac
     1321 gagccgtcca tcggcctgca ccagcgcgac aacgaccgcc tgctggcgac gctgaagcgc
     1381 ctgcgcgaca tcggcaactc ggtggtggtg gtcgagcatg acgaggacgc catccgtacc
     1441 gccgactacc tgatcgacat gggcccaggc gccggcatcc acggcggcca ggtggtggcc
     1501 gagggcaccc ccgacgcggt gatgaagaac cccgaaagcc tgaccggcca gtacctgacc
     1561 ggcaagcgcg gcattcccct gcccgccgcc cgccgcccgg gcaacggcaa caagctgacc
     1621 attgtcggcg cccgcggcaa caatctgcag gacgtcaccg tcgacatccc gctgggcacc
     1681 ttcacctgcg tcaccggcgt gtcgggcggc ggcaagtcca ccctggtgat cgagacgctg
     1741 tacaaggcgc tggcccgcca gttgatgaac gcccgcgagc atcccacccc gttcgaccgc
     1801 atcgagggcg tccagttcct ggacaagatc atcgacatcg accagtcgcc catcggccgc
     1861 acgccccggt ccaacccggc cacctatacc ggcgcgttca cccccatccg cgactggttc
     1921 accgaattac ccgaggccaa gcagcgcggc tacaaggccg gccgcttcag cttcaacgtc
     1981 aagggcggcc gctgcgaggc ctgccagggc gatggcgtca tcaagatcga gatgcacttc
     2041 ctgcccgacg tctacgtgca atgcgacgtc tgcaagggca agcgctacaa ccgcgaaacc
     2101 ctggaaatca cctttcgcgg caagagcata gccgatgttc ttgacatgac catcgaggag
     2161 gccgccgact tcttcaaggc ggtgccgtcc attcgcgaca agatggtgac gctgcagcgg
     2221 gtgggcctcg actacatcca cctcggccag caggccacga ccctatcggg cggtgaggct
     2281 cagcgcgtca agctggccaa ggaactgagc cgccgcgcca ccggccgcac cctctacatc
     2341 ctcgacgagc ccaccaccgg ccttcatttc gaggacgtaa ggaagctgct ggaggtactg
     2401 catgccctgg tcgagggcgg caacaccgtg ctggtgatcg agcacaatct cgaggtcatc
     2461 aagaccgc
//
LOCUS       DATIKR010000343         3330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_5375, whole genome shotgun sequence.
ACCESSION   DATIKR010000343 DATIKR010000000
VERSION     DATIKR010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5375"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1115)
                     /locus_tag="VLL76_05440"
     CDS             complement(<1..1115)
                     /locus_tag="VLL76_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper ion binding protein"
                     /protein_id="HSV28976.1"
                     /translation="MTHQTAASISLPVKGMTCAACSTRLEKVLGKVDGVRQASVSLAS
                     ERADIRYDASRTGPERLAEAVGKAGFSVPSEELELAVTGMTCAACSTRLEKVLGKLVA
                     KAEVNLATERARVEFLPGTVAAADLVAAVEKAGFGAKVVTGADEQWAREEEDHRRASR
                     RQLAMVALSALLTLPLVFGMFADLAGRHDLMLPPLAQLLLTTPVQFWIGWRFYEGAWK
                     SLRGGAGNMDVLVALGTSAAYGLSVVNVARGEGHLYFEAAAVVITLVLLGKFLENRAK
                     RSAAGAIRALMKLRPDTARVERDGRLVEVPAEAVAAGDIVVVRPGERMPVDGIVVEGD
                     SQMDESLITGESLPVAKCAGDEVVAGAVNGDGLLRVRA"
     gene            1254..2135
                     /locus_tag="VLL76_05445"
     CDS             1254..2135
                     /locus_tag="VLL76_05445"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV28977.1"
                     /translation="MAELPDTRDLARFVDTVLDRLEKFRAEVSDIATSIDDVNRFVAE
                     QQPRFQALSQIANAMTKAIAAIDAAAKDTDAVAREASGRSHASLSTVQEALGDIRGMA
                     EAVRGIEQRLGELEHALGQVGARSGDIQAIAKQTNLLALNATIEAERAGEAGKGFAVV
                     ATEVKSLARKAGEVTLGIDDAVETLSSNVGELIKSSAETAAQAGAVSDGVGVISDTIT
                     GFGRSLEGIGAKVEDITAAASDSLTQCEDVIDYVDTFMVSLSTTGETLEEAKHKIDGL
                     VARSGDAVNFLRKSSPT"
     gene            2171..>3330
                     /locus_tag="VLL76_05450"
     CDS             2171..>3330
                     /locus_tag="VLL76_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28978.1"
                     /translation="MQRGIAVVVTAFLLLSTGQAFAIERQVVKGTCGNTEITLPPITV
                     GCEAVDCCPGCPLPDKLDWRIRVLGQGVTSVRLGGPALSAAKRLGAKGGQVGRLPVRA
                     TIRPVVQVKPMATGPTTVVFEQLLGSRVVNATRAILVDDPQLCGPPDFIALPGKEIRD
                     PAVDRSFVMVDGRDATGCVDDRVASGMDGVEVDNLLPPESCRSEVFVFSRHNGLSWAT
                     NVTDTWTPARGDRLEVPLRPRAVVPLTVWKTAPNLHSWAEDQMAMARAVMVANATGIE
                     FDVRWRDISADTPENDALRRTIGTHCPEPGDDRLTRHTEAFEKDRLNIYVIGAYEPLQ
                     SWCPFHPLIFAGPTPDSTDLARKLAVAFSLTAVTVHDGFTEDNLMALNEDDSA"
BASE COUNT          556 a         1190 c         1085 g          499 t
ORIGIN      
        1 gcgcgcaccc gcaacaggcc gtcgccgttg acggcgcccg ccaccacctc gtcccccgcg
       61 cactttgcca ccggcaggct ttcgccggtg atcaggcttt catccatctg gctgtcgccc
      121 tcgacgacga tgccgtccac cggcatgcgc tcgccggggc gcaccaccac gatatcgccc
      181 gccgccaccg cctcggcggg cacctcgacc aggcggccgt cgcgctcgac gcgggcggtg
      241 tcgggccgca gcttcatcaa cgcgcggatg gcgccggcag ccgagcgctt ggcgcggttc
      301 tccaggaact tgcccagcag caccagggtg atgaccacgg cagccgcctc gaaatacaga
      361 tggccctcgc cgcgcgccac gttgaccacc gacagcccat aggccgccga ggtgcccagc
      421 gccaccagca cgtccatgtt gccggcgccg ccgcgcagcg acttccaggc gccctcgtag
      481 aagcgccagc cgatccagaa ctgcaccggg gtggtcagca gcaattgggc cagcggcggc
      541 agcatcaagt cgtggcgccc cgccaggtcg gcgaacatgc cgaacaccag cggcagcgtc
      601 agcaatgccg acagcgccac catcgccaac tgccggcggc tggcgcgccg atggtcttct
      661 tcctcgcgcg cccattgctc gtcggcaccg gtcaccacct tggcgccgaa gccggctttc
      721 tccaccgccg ccaccagatc ggcggcggcc acggtgccgg gcaggaattc gacgcgggca
      781 cgctcggtcg ccagattgac ctcggccttg gcgaccagct tgcccagcac cttttccagc
      841 cgggtcgagc aggcggcgca ggtcatgccg gtgaccgcca gttccagttc ctcggacggc
      901 acggaaaacc cggccttgcc caccgcctcg gccaggcgtt cggggccggt gcggctggcg
      961 tcataacgga tgtcggcgcg ttccgaggca aggctgacgc tggcttgccg caccccgtcc
     1021 accttgccga gaaccttctc caggcgggtg gaacaggcgg cgcaggtcat gcccttgacg
     1081 ggcaggctga tggaagcggc ggtctggtgg gtcatggcgc ggtcctcctt ggacccttca
     1141 gacaattggg cttccagtca ctggaaggtc aaggtctttg atgcggtttt ggcgaaattc
     1201 gagtcatact gccccaaacc cgcgtcagac gggaccgagg aggaggacac gacatggccg
     1261 aactgcccga tacccgcgac cttgcccgct tcgtcgacac ggtgctggac cggctggaga
     1321 agttccgcgc cgaggtgtcg gacatcgcca ccagcatcga cgacgtcaac cgcttcgttg
     1381 ccgagcagca gccgcgcttc caggcgctga gccaaattgc caacgccatg accaaggcca
     1441 tcgccgccat cgacgccgcc gccaaggaca ccgacgcggt ggcgcgcgag gcctcgggcc
     1501 ggtcgcacgc ctcgctgtcc accgtgcagg aggcgctggg cgacatccgc ggcatggccg
     1561 aggcggtgcg cggcatcgaa cagcgtctgg gcgaactgga gcacgccctg ggccaggtcg
     1621 gcgcccgctc cggcgacatc caggccatcg ccaagcagac caacctgctg gccctgaacg
     1681 ccaccatcga ggccgagcga gcgggcgagg ccggcaaggg cttcgccgtc gtcgccaccg
     1741 aggtcaagtc gctggcgcgc aaggcgggcg aggtcaccct gggcatcgac gatgccgtcg
     1801 agaccctgtc gtccaacgtc ggcgagttga tcaagagcag cgccgagaca gccgcgcagg
     1861 ccggcgcggt cagcgacggc gtcggcgtga tctcggacac catcaccggc ttcggccggt
     1921 cgctggaggg catcggcgcc aaggtcgagg acatcaccgc cgccgcctcg gattcgctga
     1981 cacagtgcga ggacgtgatc gactacgtcg acaccttcat ggtcagcctg tccaccaccg
     2041 gcgaaacgct cgaggaagcc aagcacaaga tcgacggcct ggtggcgcgc agcggcgacg
     2101 ccgtgaattt cttacggaaa agctctccaa cttaagctac cctgagtatg cattgcaggg
     2161 gggctgcgtc atgcagaggg gaattgccgt cgtcgtcacg gcgtttttac tgctgtccac
     2221 cggacaggct ttcgccatcg aacggcaggt cgtcaagggc acctgcggca acaccgaaat
     2281 caccctgcca cccatcacgg taggctgcga agcggtcgat tgctgccccg gttgcccgct
     2341 gcctgacaag ctggactggc gcatccgcgt cctcggacag ggcgtcacct cggtccgtct
     2401 gggaggtccg gccctgtccg ccgccaagcg cctgggcgcc aagggcggcc aggtgggcag
     2461 gctgccggtg cgggcgacaa tccggcccgt ggtccaggtc aagcccatgg cgaccggccc
     2521 gacgaccgtg gtgttcgaac aattgctcgg cagccgcgtg gtcaacgcca cccgcgccat
     2581 cctggtggac gacccgcaat tgtgcggccc gcccgatttc atcgcgctgc cgggcaagga
     2641 gatccgcgac ccggccgtcg atcgctcctt cgtcatggtc gatggccgcg acgccacggg
     2701 ctgcgtcgat gaccgagtcg cgtcggggat ggatggcgtt gaggtggaca acctgctgcc
     2761 gccggagtct tgtcgctcgg aggtgttcgt cttctcacgc cacaacggtt tgtcgtgggc
     2821 gaccaacgtc accgatacgt ggacgcccgc gcggggcgac cgcctggagg ttccgttgcg
     2881 accgcgcgcc gtggtgccgc tgaccgtgtg gaagacggca cccaacctcc attcctgggc
     2941 cgaggatcag atggccatgg cccgcgcggt catggtcgcc aacgccaccg gcatcgagtt
     3001 cgacgtccgc tggcgcgaca tcagtgccga caccccggaa aacgacgccc tgcggcggac
     3061 catcggcacc cattgccctg aaccgggcga cgaccggttg acccgccaca ccgaggcctt
     3121 cgagaaggac cgcctgaaca tctatgtgat cggggcctac gagcctctgc aatcgtggtg
     3181 cccgttccac ccgctgatct tcgcggggcc gacacccgat tccaccgacc tggcgcgcaa
     3241 actcgcggtc gccttcagcc tcaccgcggt gacggtgcac gacggcttca ccgaggacaa
     3301 cctcatggct ctcaacgaag acgattcggc
//
LOCUS       DATIKR010000344         2168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_29547, whole genome shotgun sequence.
ACCESSION   DATIKR010000344 DATIKR010000000
VERSION     DATIKR010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29547"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1415
                     /gene="recG"
                     /locus_tag="VLL76_05455"
     CDS             <1..1415
                     /gene="recG"
                     /locus_tag="VLL76_05455"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HSV28979.1"
                     /translation="DELLSNQLALAMVRASMRRLKGRPIQGDGRLRAKVMAALPFALT
                     GAQSRSLAEIDTDMQQPIRMLRLLQGDVGSGKTVVALLAMLSAVEIGAQAAMMAPTEI
                     LARQHLATIEPLAAAAGLRVGLLTGRDKGKTRERILAAVAEGEIDLLIGTHALFQEDV
                     AFKDLALAVIDEQHRFGVHQRLELAAKGVAVDVLVMTATPIPRTLLLTAYGDMDASRL
                     DEKPPGRQPVDTRIVPLARLDEMVQAVGRAIKGGARVYWVCPLVEESETSDLAAADER
                     HRHLTHMFGDRVGLVHGKMKGTAKDKVMEAFARGDLDILVATTVIEVGVNVPEATVMV
                     IEHAERFGLAQLHQLRGRVGRGSGASSCLLLYGQPVSETAKARLEIMRATEDGFRIAE
                     EDLRLRGGGEVLGTRQSGLPEFRMADLAIHGELLAAARDDSRLILERDPELKSERGQA
                     LRVLLYLFERDAAVRTLRSG"
     gene            complement(1501..>2168)
                     /locus_tag="VLL76_05460"
     CDS             complement(1501..>2168)
                     /locus_tag="VLL76_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HSV28980.1"
                     /translation="PPPAADTPAESLHIGLMGRLRAYFFAGILVTAPVSITFYIAWQF
                     IKFMDNQVSPLIPPAFNPQNWGIPGFGLIAVAVGLTLIGMLTAGFAGRLFVKLSDAVL
                     ERMPVIRSIYSAVKQIFETMLAQKANAFREVVLIEYPRKGIWTLGFITGTTNGEVKTR
                     FDQEMVNVFVPTTPNPTSGFLLFLPRAEVQVLEMSVEDGIKMVVSTGILTPPAKKAVV
                     PTV"
BASE COUNT          366 a          719 c          753 g          330 t
ORIGIN      
        1 atgacgagct gctgtcaaac caactggcgc tggccatggt gcgggccagc atgcgccggc
       61 tcaaggggcg cccgatccag ggcgacggcc gcctacgcgc caaggtcatg gccgccctgc
      121 ccttcgccct gaccggggcg caaagccgct cgctggcgga aatcgatacg gacatgcaac
      181 aacccatccg catgctgcga ttgctgcagg gcgacgtggg cagcggcaag acggtggtgg
      241 cgctgctcgc catgctgagc gcggtcgaga tcggcgccca ggccgccatg atggcgccca
      301 cggaaatcct ggcccgccag caccttgcca ccatcgagcc gctggccgcc gcagccggcc
      361 tgcgcgtcgg gttgctgacc gggcgcgaca agggcaagac gcgcgaacgc atcctggcgg
      421 ccgtggccga gggcgagatc gacctgctga tcggcaccca tgccctgttc caggaggacg
      481 tggcgttcaa ggacctagcc ctggcggtga tcgacgagca gcaccgcttc ggcgtccacc
      541 agcggctgga actggcggcc aagggtgtgg cggtggacgt gctggtgatg accgcgacgc
      601 ccatcccccg caccctgctg ctgaccgcct atggcgacat ggatgcctcg cggctggacg
      661 agaagccgcc ggggcgtcaa ccggttgaca cccgcatcgt gccgctggcc cgcctcgacg
      721 aaatggtgca ggcggtcggc cgcgccatca agggcggcgc ccgcgtctat tgggtctgcc
      781 cgctggtcga ggaatccgag acctcggacc tggccgccgc cgacgagcgt catcgccacc
      841 tcacccacat gttcggcgac cgcgtcggcc tggtccacgg caagatgaag ggcacggcca
      901 aggacaaggt gatggaggcg tttgccaggg gcgacctcga catcctggtc gccaccacgg
      961 tgatcgaggt cggcgtcaac gtgcccgagg ccaccgtgat ggtgatcgag catgccgaac
     1021 gtttcggcct tgcccagttg caccagttgc gcggccgcgt cgggcgtggc tcgggcgcgt
     1081 cgtcctgtct gctgctgtac ggccagccgg tgtccgagac cgccaaggcg cggcttgaga
     1141 tcatgcgcgc caccgaggac ggcttccgca tcgccgagga ggacctgcgc ctgcgcggcg
     1201 gcggcgaggt gctgggcacc cgccaaagcg gcctgccgga attccgcatg gccgacctcg
     1261 ccatccacgg cgaattgctg gccgccgccc gcgacgattc ccgcctgatc ctggagcgcg
     1321 accccgagct gaaaagcgag cgcggccagg cgctgcgcgt gctgctctac ctgttcgagc
     1381 gcgatgcggc ggtcaggacg ctgcggtcgg gctagcctgt catgctgagc gcagcgaagc
     1441 atctttcagc cgctgccggc tcgggtgaaa gatccttcgg ctgaagcctc aggatgacaa
     1501 tcacaccgtg ggaacgaccg ccttcttcgc cggcggggtc aggatgccgg tggacaccac
     1561 catcttgatg ccgtcctcga cgctcatctc cagcacctgg acctcggcgc ggggcaggaa
     1621 tagcaggaag cccgaggtcg ggttgggggt cgtcggcacg aagacgttga ccatttcctg
     1681 atcgaaacgg gtcttgacct cgccgttggt ggtgccggtg atgaatccca gggtccagat
     1741 gcccttgcgg gggtattcga tcagcacgac ctcgcggaaa gcgttggcct tctgcgccag
     1801 catggtctcg aagatctgct tcaccgccga atagatgctg cggatgaccg gcatccgttc
     1861 cagcaccgcg tccgacagct tgacgaacag gcggccggcg aagccggcgg tcagcatgcc
     1921 gatcagagtc aacccgacgg cgacggcgat caggccgaag ccggggatgc cccaattctg
     1981 cggattgaac gccggcggga tcagcggcga cacctggttg tccatgaact tgatgaactg
     2041 ccaggcgatg tagaaggtga tcgacaccgg cgcggtgacc aggatgccgg cgaagaaata
     2101 cgcccgcagc cgccccatca agccgatgtg cagcgattcg gcgggcgtgt cggcggcggg
     2161 aggcggcg
//
LOCUS       DATIKR010000345         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_235108, whole genome shotgun sequence.
ACCESSION   DATIKR010000345 DATIKR010000000
VERSION     DATIKR010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235108"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="VLL76_05465"
     CDS             <1..494
                     /locus_tag="VLL76_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nicotinic acid mononucleotide
                     adenylyltransferase"
                     /protein_id="HSV28981.1"
                     /translation="VSPQNPLKPVAGMAPLAERMAAARAVMAGDPRIRVTALETAFGT
                     RYTVDTLAVLRTRFPNVRFVWLMGADNLVQVSRWARWIDIFHAVPVAILARSPYSQRA
                     LAAKAARRLAGYRVKQARGLADRKPPAWAFLHTRLHPASATAIRARRQSAVGPARVSK
                     KEM"
     gene            491..916
                     /gene="rsfS"
                     /locus_tag="VLL76_05470"
     CDS             491..916
                     /gene="rsfS"
                     /locus_tag="VLL76_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014746486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HSV28982.1"
                     /translation="MTIKPRSKAASLKAEDLVDLVIGSLDDDKAEDITVIDLRGKSSI
                     ADHMVIATGKSSRQVGAMAEHLMEKLKHVGLAPAAEGMPQCDWVLIDGADIVVHLFRP
                     EVRAFYNLEKMWGVPKAETAGGMAMGMKPAMAHAPGPVA"
     gene            981..1439
                     /gene="rlmH"
                     /locus_tag="VLL76_05475"
     CDS             981..1439
                     /gene="rlmH"
                     /locus_tag="VLL76_05475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HSV28983.1"
                     /translation="MRIWLAAIGRAKPGPELELFQQYARRLTPPLSLKEAEEKRPLPV
                     PERMAREAELLLSAVPQGAVVVALDERGKAMGSEAFATRLGQWRDQSVGDVAFLIGGA
                     DGHHQSVRDRADLLLSLGPMTWPHMLVRAMLAEQLWRAQAILAGHPYHRA"
     gene            1520..2026
                     /locus_tag="VLL76_05480"
     CDS             1520..2026
                     /locus_tag="VLL76_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28984.1"
                     /translation="MEGDIPPDELAAFEAYRERVKGTNISGSTLLATDYLNHFNEIVM
                     LLDMLPEMPDMIEECKLWEPKGYKAHFADSSFSDKELAIDAYDRVPTKFRRPFEETIR
                     ALNLLLMEGITRLDQQIAEGADADMLRESCKAISRAAQTLMDCASSIIHGSDRAMAQA
                     EIDGLLGR"
     gene            2030..2278
                     /locus_tag="VLL76_05485"
     CDS             2030..2278
                     /locus_tag="VLL76_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28985.1"
                     /translation="MRAETILFLPQGDGYRITDEFRDRTYGTITPQVVEKPGRRPSRR
                     FHVVVDLGGGIDTQADYMDLDEAQERAEAFIRAHGTLG"
BASE COUNT          423 a          788 c          806 g          379 t
ORIGIN      
        1 tggtcagtcc gcagaacccg ctgaagccgg ttgccggcat ggcgccgctg gccgagcgga
       61 tggcggcagc gcgggcggtg atggcgggcg atccccggat ccgggtcacg gcgctggaga
      121 ccgcgttcgg cacgcgttac accgtcgaca ccctggcggt gctgcgaacc cgcttcccca
      181 acgtgcgctt cgtctggctg atgggtgccg acaatctggt ccaggtcagc cggtgggcgc
      241 gttggatcga catatttcat gccgtgccgg ttgcgattct agcccgttct ccctattctc
      301 aaagggcgtt ggccgccaag gcggcccgcc gtctggccgg ataccgggtc aaacaggcgc
      361 gcgggctggc ggatcggaag cccccggcat gggccttcct gcatacccgg cttcatccgg
      421 cttcggccac cgccatccgc gcccgtcggc aaagtgccgt tggacctgcg cgggtgagca
      481 agaaggagat gtgaccataa aaccccgatc taaggccgct tccctgaaag cggaggatct
      541 ggtcgatctc gtcatcggct cgctcgatga cgacaaggcc gaggacatca ccgtcatcga
      601 ccttcgtggc aagtccagca tcgccgatca catggtgatc gcaaccggca agtcgtcgcg
      661 tcaagtcggc gccatggccg agcacctgat ggaaaagctg aagcatgtcg gcctggcgcc
      721 cgccgccgaa ggcatgccgc aatgcgattg ggtgctgatc gacggcgccg acatcgtcgt
      781 ccatctgttc cgtcccgaag tgcgcgcctt ctacaatctg gaaaagatgt ggggcgtgcc
      841 caaggccgag acggccggcg gcatggcgat ggggatgaag cccgcgatgg ctcacgcgcc
      901 cggccccgtg gcctgacgcg agcgaaggcg aaccaagggg ggagcggccg ccgcttgaag
      961 ggcggcggcc ggaagtcttc atgcgcatat ggctagccgc catcggccgc gccaagcccg
     1021 gccccgaact cgaactcttc cagcaatacg cccgccgcct gacgccgccc ttgagcttga
     1081 aggaggccga ggagaagcgg ccgctgccgg tgcccgagcg catggcgcgc gaggccgaac
     1141 tgctgctgtc ggcggtcccc cagggcgccg tcgtggtggc cttggacgaa cgcggcaagg
     1201 ccatgggatc ggaagccttc gccacccgcc tgggccagtg gcgcgaccag tcggtgggcg
     1261 acgtcgcctt cctgatcggc ggcgccgacg gccatcacca gagcgtgcgc gatcgcgccg
     1321 acctgctgct gtcgctgggg ccgatgacct ggccgcacat gctggtccgc gccatgctgg
     1381 ccgagcaatt gtggcgggcc caggcgatcc tggccggcca cccctatcac agggcgtagg
     1441 ggatggttcg aaacgccgct tgaaatggtg cggcgcaagg gccaggattg gcctatcagg
     1501 ggatagggag agcgcttcgg tggaaggtga catcccgccg gacgaactgg ctgcgttcga
     1561 ggcgtatcgc gaaagggtca aggggaccaa catctccggg tcgaccctgc tggcgaccga
     1621 ctacttgaac catttcaacg agatcgtcat gcttctcgac atgctgccgg aaatgccgga
     1681 catgatcgag gaatgcaagc tttgggagcc caagggctac aaggcgcact tcgccgattc
     1741 ctcgttctcg gacaaggaac tggcgatcga cgcctatgac cgcgtgccca ccaagttccg
     1801 ccggccgttc gaggaaacca tccgggcgct gaatttgttg ctgatggaag gcatcacccg
     1861 gctggaccag cagatcgccg agggcgccga tgccgacatg ctgcgcgaaa gctgcaaggc
     1921 catttccagg gcggcccaga ccttgatgga ttgcgcctcg tcgatcatcc acggttccga
     1981 ccgcgccatg gcgcaggcgg aaatcgacgg cctgctgggg cgctgagcca tgcgggcgga
     2041 aaccatcctg ttcctgcccc agggcgacgg ctaccgcatc accgacgagt tccgcgaccg
     2101 cacctacggc accatcaccc cgcaggtggt ggaaaagccc ggccgccggc ccagccgccg
     2161 cttccacgtg gtcgtcgacc tgggtggcgg catcgacacc caggccgact acatggacct
     2221 ggacgaggcc caggaacgcg ccgaggcgtt catccgggcc catggcacat tgggctgacc
     2281 tcaggaactg agccggccga tccggttgtt ctgtccgatg gcgaacaact ccacccctcg
     2341 tctggcggga gcggcccgca gatggtcggg ccagaccagc gacgtctgga acatca
//
LOCUS       DATIKR010000346         3238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_78384, whole genome shotgun sequence.
ACCESSION   DATIKR010000346 DATIKR010000000
VERSION     DATIKR010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78384"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1126
                     /locus_tag="VLL76_05490"
     CDS             <1..1126
                     /locus_tag="VLL76_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV28986.1"
                     /translation="RNWEQAVERFREAEAGESRPDRAFAARTRIEMQLKRGDITPAQA
                     IPQMERLRFAWRGGDFEYRLVKRLGELTLADGQYGNGLRLLRSITENYADHPDVGSVQ
                     TMMNAAFEKLFLGGGADKLQPIVAIGLYDEFQELTPSGEKGDEMIRKLADRLASVDLL
                     DRAAELLRHQVQFRLQGIDKARVGTRLALLELADRKPAQALDSLDMSEMPGLPDELHD
                     QRRYMRVQALSDLGRAAEALALIINDQSDPARRLRAEIYWNMKKWPEAATALESVIEP
                     PDLRRPLTPPAARRILDLATALTLARDDRGLARIRRQFGPQMAATDLREAFDLLTSEP
                     ERGIPDYRRIGDKIKQAQDFQTFISEWRKRVQSEGLSSIN"
     gene            1292..1774
                     /gene="speD"
                     /locus_tag="VLL76_05495"
     CDS             1292..1774
                     /gene="speD"
                     /locus_tag="VLL76_05495"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HSV28987.1"
                     /translation="MAHALAQLGMNSGANPRNTQSVSAANEDQAWPESENGKDYYVSR
                     NGVKYAGTHLLIDLWGATNLDDIELVEEALRRSAIEGGATILHCHLHHFQPNGGISGV
                     LVLAESHISIHSWPERGYAALDVFMCGDCDPYKAIPVLKDAFKPDFVTLSESKRGLMP
                     "
     gene            1771..2622
                     /gene="speE"
                     /locus_tag="VLL76_05500"
     CDS             1771..2622
                     /gene="speE"
                     /locus_tag="VLL76_05500"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007671528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HSV28988.1"
                     /translation="MSSWYRESLYDHWQQSFLVSREIYRSQGGLQEIALFETPGFGRV
                     LTLDGVIQVTTGDEFVYHEMLAHVPVYAHGNVKTACVVGGGDGGMLREILKHKSVEKA
                     VLVEIDGAVVDFCREHMPSVSDGAFDDPRTEIVIADGIKFMAETDRKFDLIVIDSTDP
                     IGPGGVLFTEPFYRDCARCLNPDGIVVNQNGVPFLQGEEVTDTYRRRKAHFADVGYYL
                     AAVPTYVGGFMALGWACQSTRPRLEAAETIRARFDAAPVATRYYTPDLHKASFALPKF
                     VQDLIHD"
     gene            2667..>3238
                     /locus_tag="VLL76_05505"
     CDS             2667..>3238
                     /locus_tag="VLL76_05505"
                     /inference="COORDINATES: protein motif:HMM:NF012803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSV28989.1"
                     /translation="MTTRAFLILIALLVPAAAHADRVALAEAFAQAGIESTSATANAA
                     LLDEMIGHIADLYVEPRKPDELAAAAAKAVRELPKPVTADAAFKAATEALTKELDPHT
                     AYLSPADMDDMMATTSGEFGGIGVEITLKDEKVTVVAPIDDTPAARAGLTAGDVITHV
                     DGQAVAGLPLGQVVGRIRGRIGATVTLTLAR"
BASE COUNT          571 a         1096 c         1031 g          540 t
ORIGIN      
        1 gcgcaactgg gagcaggcgg tggagcggtt ccgcgaggcc gaggccggtg aaagccgccc
       61 cgaccgcgcc ttcgccgccc gtacccgcat cgagatgcag ctcaagcgcg gcgacatcac
      121 ccccgcccaa gccatccccc agatggagcg gctgcgcttc gcttggcgcg gcggcgattt
      181 cgaataccgc ctggtcaagc gcctgggcga gctgacgctg gccgacggcc agtacggcaa
      241 cggcctgcgg ctgctgcgct cgatcaccga gaattacgcc gaccatcccg acgtgggatc
      301 ggtgcagacg atgatgaacg ccgccttcga gaagctgttc ctgggcggcg gcgccgacaa
      361 gctgcagccc atcgtcgcca tcggcctcta cgacgagttc caggagctga cgccgtcggg
      421 cgagaagggc gacgagatga tccgcaagct ggccgaccgg ctggcctcgg tggacctgct
      481 cgaccgcgcc gccgaattgc tgcgccacca ggtgcaattc cgcctgcaag gcatcgacaa
      541 ggcccgcgtc ggcacccgcc tggcgttgct ggaattggcc gaccgcaagc cggcccaggc
      601 actggacagc ctggacatga gcgagatgcc gggcctgccc gacgaattgc acgaccagcg
      661 ccgctacatg cgggtgcagg cgctgtcgga cctgggccgc gccgccgagg ccctggcgct
      721 gatcatcaac gaccaatccg atccggcccg gcggctgcgc gccgagatct attggaacat
      781 gaagaagtgg cccgaggccg ccaccgccct ggaatcggtg atcgagccgc ccgacctgcg
      841 gcggccgctg accccgcccg ccgcccgccg catcctcgac ctcgccacgg cgctgacgct
      901 ggcccgcgac gaccgtggcc tggcccgcat ccgccgtcag ttcggtcccc agatggcggc
      961 gaccgacctg cgcgaagcat tcgacctgct gaccagcgaa ccggagcgcg gaatccccga
     1021 ttatcgccgc atcggcgaca agatcaagca ggcccaggac tttcagacat tcatcagcga
     1081 gtggcgcaag cgcgttcaat ccgaaggact gtcgtccatc aactgacatt ttatttggaa
     1141 gtggtgcaga tgccccaatc ctctacatct tgaccgatgc gaaggatttt tagggcaggg
     1201 gggtattttt ttcttgcatc accgggaggt ttgatagata aaccgcctcc ttacccatct
     1261 taggtccatc tactggtttg gagggggagc aatggctcac gctcttgccc aactggggat
     1321 gaactcgggg gcaaatccga ggaataccca aagcgtttcc gccgctaacg aggatcaggc
     1381 ctggcctgaa tccgagaacg gcaaggacta ctatgtgtcg cgcaacggcg ttaagtatgc
     1441 cggaacgcat cttctcatcg atctgtgggg cgccaccaat ctcgacgaca tcgagctggt
     1501 ggaggaagcc ttgcgtcggt cggcgatcga gggtggtgcg accatcctgc actgccacct
     1561 ccaccatttc cagcccaatg gcgggatttc gggggtgctg gtgttggcgg aaagccacat
     1621 ctccatccat tcctggcccg agcgcggcta tgcggcgctc gacgtcttca tgtgcggcga
     1681 ttgcgacccc tacaaggcca ttcccgtgct caaggacgcg ttcaagcccg acttcgtcac
     1741 gctgtcggaa agcaagcgcg gattgatgcc gtgagctcct ggtaccggga gagcctgtac
     1801 gaccactggc agcaaagctt cctggtcagt cgggagatct atcggtccca gggcgggctg
     1861 caagagatcg ctttgttcga gacacccggc ttcggccggg tgctcacttt ggacggggtg
     1921 atccaggtca ccaccggcga cgaattcgtc tatcacgaga tgctggcgca cgttcccgtc
     1981 tatgcccacg gcaacgtcaa gacggcgtgc gtggtcggcg gcggcgacgg cggcatgctg
     2041 cgcgagatcc tcaagcacaa atcggtggaa aaggcggtgc tggtcgagat cgatggcgcc
     2101 gtggtcgatt tctgccgcga gcacatgccc agcgtgtccg acggcgcgtt cgacgatccc
     2161 cgcacggaaa tcgtcatcgc cgacggcatc aagttcatgg ccgagaccga ccgcaagttc
     2221 gatctgatcg tcatcgattc gaccgacccc atcggccccg gcggcgtgct gttcaccgag
     2281 ccgttctaca gggattgcgc ccgctgcctg aaccccgacg gcatcgtggt caaccagaac
     2341 ggcgtgcctt tcctgcaggg cgaggaagtc accgacacct atcgccgtcg caaggcccac
     2401 ttcgccgacg tcggctatta cctggcggcg gtgccgacct atgtgggcgg cttcatggcg
     2461 ctgggctggg cctgccagtc cacccgcccg cggctcgagg cggcggaaac catccgggcc
     2521 cgcttcgatg ccgcgccggt ggcgacccgc tattacaccc ccgacctgca caaggcgtct
     2581 ttcgcgctgc cgaagttcgt ccaggacctg atccacgact gaacggggcc tttttctttc
     2641 ggtcgtcatg cgccatcatc cggcgcatga cgacacgcgc cttcctgatc ctgatcgccc
     2701 ttctggttcc cgccgccgcc cacgccgacc gcgtggcgtt ggccgaagcg ttcgcgcagg
     2761 cagggatcga atccacatcc gccaccgcca atgcggcgct gctcgatgag atgatcggcc
     2821 atatcgccga cctctacgtg gagccgcgca agcccgacga gttggcggcg gcggcggcca
     2881 aggcggtgcg cgaattgccc aagcccgtca ccgccgacgc ggcgttcaag gcggcgaccg
     2941 aggcgctgac caaggagctc gatccccaca ccgcctatct gtcgccggcc gacatggacg
     3001 acatgatggc gaccacgtcg ggcgagttcg gcggcatcgg cgtcgagatt accctgaagg
     3061 acgaaaaggt cacggtggtg gcgcccatcg acgacacccc ggcggcccgc gccggtctga
     3121 ccgccggcga cgtcatcacc catgtggacg gccaggcggt ggccggcctg ccgctgggcc
     3181 aagtggtggg gcgcatccgc ggccgtatcg gtgcgaccgt caccctgacc ctggcccg
//
LOCUS       DATIKR010000347         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_186365, whole genome shotgun sequence.
ACCESSION   DATIKR010000347 DATIKR010000000
VERSION     DATIKR010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186365"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VLL76_05510"
     CDS             <1..215
                     /locus_tag="VLL76_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006746435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HSV28990.1"
                     /translation="YPQVSDRMVGDKAADIGATGAETVLAGDLGCLMNIAGKLKRQGS
                     GVKARHVAEVLAGMADGPAIGEAEES"
     gene            217..1632
                     /locus_tag="VLL76_05515"
     CDS             217..1632
                     /locus_tag="VLL76_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HSV28991.1"
                     /translation="MHPTSHAFKKNADKALHDDGLQDALAKLKAGFRVKRAVAVARLP
                     EFDDLRDAGKALKDHTLAHLDHYLEAFESKVVETGGQVHWARDADEARKAVLEICRQA
                     GARTVTKGKSMVGEEIGLNAYLQANGVTPVETDLGEYIIQLRDEPPSHIVAPAIHLNR
                     THVAEAFLKAHTHRQAGRDLIEPRAMLDEAREEMRTHFHAADVGITGANMLIAETGTT
                     VIVTNEGNGDLTQILPKVHIVLATIEKVVPTLDDAATIIRLLARSATGQELSVYTTFS
                     TGPKRGDDLDGPEEFHVVILDNGRSGMLGGEFQDMLRCIRCAACINHCPVYGAVGGHA
                     YGWVYPGPMGSVLTPALVGLAEARHLPNASTLCGRCEEVCPMRIPLPKMLRHWREREF
                     ERHLTPPRDRWGLKLWAFAARHPSLYRVGARLAAWGLARLSRQGRIARLPLARGWTDT
                     RDLPAPSGQTFVEAWNRGRRQ"
     gene            1629..>2001
                     /locus_tag="VLL76_05520"
     CDS             1629..>2001
                     /locus_tag="VLL76_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28992.1"
                     /translation="MSVIMAEHRAKKAREDELLHDQLAAAIVSGTVEVHTDQRMLDFQ
                     GSPVHSPWDHLAPLLALMFLALAVLLFAGVAIGIVAMTMGVFAHVYGVKHLVAWRIRQ
                     RATAYMLASTAHWQQLWHLGGI"
BASE COUNT          321 a          700 c          684 g          296 t
ORIGIN      
        1 agtatcccca ggtctccgac cgcatggtcg gcgacaaggc cgccgacatc ggcgccaccg
       61 gggcggaaac cgtgctggcg ggcgacctcg gctgtttgat gaacatcgcc ggcaagctca
      121 agcgccaggg ctcgggggtc aaggcgcggc acgtggccga ggtgctggcg ggcatggccg
      181 atggcccggc catcggcgag gcggaggaat cctgacatgc atcccaccag ccacgccttc
      241 aagaagaacg ccgacaaggc actgcacgac gacggcctgc aggacgcgct ggccaagctg
      301 aaggcggggt tccgggtcaa gcgggcggtg gcggtggcgc ggctgccgga attcgacgat
      361 ctgcgcgacg ccggcaaggc gctcaaggac cacaccctgg cccatctcga ccattacctg
      421 gaagccttcg agagcaaggt ggtcgagacc ggcggccagg tccattgggc gcgcgacgcc
      481 gacgaggcgc gcaaggcggt gctcgagatc tgccgccagg ccggcgcccg cacggtgacc
      541 aagggcaagt ccatggtggg cgaggagatc ggcctcaacg cctatctcca ggccaacggc
      601 gtgacgccgg tggaaaccga tctcggcgaa tacatcatcc agctgcgcga cgagccgccc
      661 agccacatcg tggcgccggc catccacctc aaccgcaccc atgtggccga ggccttcctc
      721 aaggcccaca cccatcgcca ggccgggcgc gacctgatcg agccgcgcgc catgctggac
      781 gaggcgcgcg aggaaatgcg cacccatttc cacgccgccg acgtgggcat caccggtgcc
      841 aacatgctga tcgccgaaac cggcacgacg gtgatcgtca ccaacgaggg caacggcgac
      901 ctcacccaga tcctgcccaa ggtgcatatc gtgctggcga ccatcgagaa ggtggtgccc
      961 accttggatg acgccgccac catcatccgc ctgctggcgc gctcggccac cgggcaggaa
     1021 ttgtcggtct acaccacctt ctccaccggg ccgaagcgcg gcgacgatct cgacggtccc
     1081 gaggaattcc acgtcgtcat cctcgacaac ggccgttccg gcatgctggg cggcgagttc
     1141 caggacatgc tgcgctgcat ccgctgcgcc gcctgcatca accattgccc ggtctacggc
     1201 gcggtgggcg gccacgccta tggctgggtc tatcccggcc ccatgggctc ggtgctgacg
     1261 cccgccctgg tcgggctggc ggaggcgcgc cacctgccca acgcctcgac cctgtgcggc
     1321 cgctgcgagg aagtgtgccc catgcgcatt ccgttgccca agatgctgcg ccactggcgc
     1381 gagcgcgagt tcgagcgcca cctgacgccg ccgcgcgatc gctggggcct caagctctgg
     1441 gcgtttgcgg cgcggcatcc ttcgctctat cgtgtcggtg cccggctggc ggcttggggg
     1501 ttggcgcggt tgtcccgcca gggacggatc gcgcggctgc cgctggcccg gggctggacc
     1561 gacacccgcg acctgccggc gccgtcgggc cagacgtttg tcgaggcgtg gaaccgggga
     1621 cgacgacaat gagcgtgatc atggccgagc accgggcgaa gaaggcgcgc gaggacgagc
     1681 tgctgcacga ccagcttgcc gccgccatcg tctcgggcac ggtcgaggtc cacaccgacc
     1741 agcgcatgct ggatttccag ggctcgccgg tgcattcgcc gtgggaccat ctggcgccgc
     1801 tgctggcgtt gatgttcctg gccctggcgg tgctgctgtt cgccggcgtc gccatcggca
     1861 tcgtcgccat gaccatgggg gtgttcgccc atgtctacgg cgtcaagcat ctggtggcct
     1921 ggcgcatccg ccagcgcgcc actgcctaca tgctggccag cacggcccat tggcagcagc
     1981 tttggcacct gggcggcatc g
//
LOCUS       DATIKR010000348         3668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_78455, whole genome shotgun sequence.
ACCESSION   DATIKR010000348 DATIKR010000000
VERSION     DATIKR010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78455"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1338)
                     /gene="pgi"
                     /locus_tag="VLL76_05525"
     CDS             complement(<1..1338)
                     /gene="pgi"
                     /locus_tag="VLL76_05525"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HSV28993.1"
                     /translation="MPHPTVLPAWRALDAHANQMAHAHMREMFERDPKRFATFSLRLG
                     DLLLDYSKNRVAHETMTLLADLARQSGVEAWRDRMFGGEPINTTEHRSVLHVALRNRS
                     GRPVVVHGRDVMPDIDAVLAKMRHFSDQVRSGEWTGATGKRITDVVNIGIGGSDLGPV
                     MVTEALKPYGRDDLRVHFVSNVDGTHIAETLKRLNPETALFIVASKTFTTQETIANAT
                     TARAWLVGALGEAAVASHFVALSTNATAVAAFGIDTDHMFEFWDWVGGRYSLWSAIGL
                     SIAVAVGFDRFEQLLAGAHAMDEHFRTAPLESNMPVVLALLGVWYNNFLGAQAYAVLP
                     YDQYLHRLPAYLQQLDMESNGKGVAHDGSAVAWQTGPIVFGEPGTNGQHAFYQLIHQG
                     TKLIPCDFLAAANSHNPLGDHHPILLSNYLAQTEALMKGKTPDEARAELAKEGY"
     gene            complement(1425..1982)
                     /locus_tag="VLL76_05530"
     CDS             complement(1425..1982)
                     /locus_tag="VLL76_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014746286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HSV28994.1"
                     /translation="MRRAAVAALAAGAAVPVAAHLLGGDGFSAGLHHPLGGLDHLLAM
                     VGVGLWAGQRGGRSTWALPVAFVAAMVAGGGLGLAGIGLPAVEIAILGSVIVLGTLVA
                     LRLRPPVWAGMALAGLFALFHGHAHGAEMPSAVHPVVYAAGFVTAAAILHLAGIAAAL
                     ILRDGRLVRAGGAAIALSGMLLMVA"
     gene            complement(1988..2161)
                     /locus_tag="VLL76_05535"
     CDS             complement(1988..2161)
                     /locus_tag="VLL76_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28995.1"
                     /translation="MSLFRAIPAAIALLAALPAAAHEIGVGHSHAAMDSSLVLGAVLA
                     VAGFGVWWAKNRG"
     gene            2294..2578
                     /locus_tag="VLL76_05540"
     CDS             2294..2578
                     /locus_tag="VLL76_05540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28996.1"
                     /translation="MHGSHSGKHSHEHKHAHGHEHTHVHSHAHRHGDVEHSHAHAHTH
                     SHDHVHQHSHPHDHMACDGHAHDHEDPRHGWKPHEHAHAAEDLADHDHSH"
     gene            2626..>3668
                     /locus_tag="VLL76_05545"
     CDS             2626..>3668
                     /locus_tag="VLL76_05545"
                     /inference="COORDINATES: protein motif:HMM:NF015859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE domain-containing protein"
                     /protein_id="HSV28997.1"
                     /translation="MAVLVTMLGMAGLLVVEQWEWARVRQEARLDTLNRLSTLRARLE
                     GELNGTLLLTRALSAIIAVRQDVTREEFDAIAREMMAHKRHIRNVTLAQGTVIRFVYP
                     PEGNEAAVGIDFRDLPQQWPAVERMFRTRQPILAGPVTLVQGGTAIIGRTPVFTTPPG
                     GAPGSGPPWGAVAIPITLPSLLDEAGLTASDMKLSIAIRGRDGLGAAGEVFHGDPAVF
                     ERDPVRLEVTLPGGQWVLAALPKGGWDQVRSVTILQLRTLGGGLSLLAGVLVFFWVRH
                     ADSRRDARRRVAASENRLSAMLAGAPFPLVVLRQADGAVLYANLRAGTMVGLAPQALI
                     GRPLPPRTFAPRDL"
BASE COUNT          585 a         1296 c         1274 g          513 t
ORIGIN      
        1 atagccttct ttagcaagct cagcccgggc ttcgtcaggt gtcttgccct tcatcagcgc
       61 ttcggtctgg gccaggtaat ttgaaagcag gatcgggtgg tgatcgccca gcgggttatg
      121 gctgtttgcc gcagccagga agtcgcaggg gatcagcttg gtgccctggt ggatcaactg
      181 atagaaggcg tgctggccgt tggtgccggg ttcgccgaac acgatggggc cggtctgcca
      241 cgccaccgcc gagccgtcat gggcgacgcc cttgccgttg gattccatgt ccaattgctg
      301 cagataggcg ggcagccggt gcaggtactg gtcatagggc agcacggcat aggcctgggc
      361 gcccaggaag ttgttgtacc aaacccccag cagcgccagc accaccggca tgttggattc
      421 cagcggcgcc gtgcggaaat gctcgtccat ggcgtgggcg ccggccagca attgctcgaa
      481 gcggtcgaag ccgacggcca ccgcgatgga caggccgatg gccgaccaca gcgaatagcg
      541 gccgccgacc caatcccaga attcgaacat gtggtcggtg tcgatgccga acgccgccac
      601 cgccgtggcg ttggtggaca gcgccacgaa atggctggcg acggcggcct cgcccagggc
      661 gcccaccagc caggcgcgcg ccgtggtggc gttggcgatg gtttcctggg tggtgaaggt
      721 cttggacgcg acgatgaaca gcgccgtctc gggattcagc cgcttcagcg tctcggcgat
      781 gtgggtgccg tcgacgttgg agacgaaatg gacccgcagg tcgtcgcggc catagggctt
      841 cagcgcctcg gtcaccatca ccggcccgag gtccgagccg ccgatgccga tgttgaccac
      901 gtcggtgatg cgcttgccag tggcgccggt ccattcgccc gagcgcacct ggtccgagaa
      961 atggcgcatc ttcgccagca ccgcgtcgat gtccggcatg acgtcgcggc cgtggaccac
     1021 gaccggccgg cccgagcggt tgcgcagggc cacgtgcagc accgagcggt gctcggtggt
     1081 gttgatgggc tcgccgccga acatgcggtc gcgccacgcc tcgacgcccg attgccgcgc
     1141 caggtcggcc agcagggtca tggtctcgtg ggcgacgcgg ttcttggaat aatccagcag
     1201 caggtcgccc aggcgcaggg agaaggtggc gaaacgcttc gggtcgcgct cgaacatctc
     1261 gcgcatgtgg gcgtgcgcca tctggttggc gtgggcgtcc agcgctcgcc aggccggcag
     1321 taccgtcgga tgcggcatcg acttctccct ccaatcccgt cggacgggag tctagcagag
     1381 gagaaagcgc tcctccatcc ccccgccgga cggaatttcg ggcgtcacgc caccatcagc
     1441 agcattcccg acagggcgat ggcggccccg ccggcgcgca ccagccggcc gtcgcgcagg
     1501 atcagggcgg cggcgatgcc ggccagatgc aggatggcgg cggcggtcac gaagccggcg
     1561 gcgtagacaa cgggatgcac cgccgagggc atctcggcgc cgtgggcgtg gccgtggaac
     1621 agggcgaaca gtccggccag ggccatgccg gcccacaccg gcggccgcag ccgcagcgcc
     1681 accagcgtcc ccagcacgat caccgaaccc aggatggcga tctcgaccgc cggcaggccg
     1741 atgccggcga ggccaagccc gccgccggcc accatcgccg ccacgaaggc gacgggcagc
     1801 gcccaggtcg agcggcctcc gcgctggccg gcccacaggc ccacccccac catggccagc
     1861 aggtggtcga ggccgcccag gggatggtga aggccggcgg aaaagccgtc gccgcccagc
     1921 aggtgggcgg cgacgggaac ggcggcgccg gcggccaggg ccgccacggc ggcgcgacgc
     1981 atggggatca gccccggttc ttggcccacc acacgccgaa gccggcgacg gccagcacgg
     2041 cgcccagcac cagcgaggaa tccatggcgg cgtggctgtg gccgacgccg atctcgtggg
     2101 cggcggcggg cagggcggcc agcagggcga ttgcggccgg aatggcgcgg aacaggctca
     2161 tggaaattcc ccttcggtca gattgcgggt gggattatgc gactgcgtat gggcgatggc
     2221 aacctcaaaa gtggcgccgt ttgccgcctt ggtataaggt gcgcccggtc gaacgaacgg
     2281 cagggtcgaa accatgcacg gcagccacag cggcaagcac agccacgagc acaagcatgc
     2341 tcacggccac gagcacaccc acgtgcattc ccatgcccac cgccatggcg acgtcgagca
     2401 cagccacgcc cacgcccaca cccacagcca cgaccacgtt caccagcaca gccatccgca
     2461 cgaccatatg gcctgtgacg gccacgccca cgaccacgag gatccccggc acggctggaa
     2521 gccgcacgag cacgcccacg cggccgagga tcttgccgac cacgaccaca gccactgagc
     2581 atgcggtccg cgcccatccc ctggccgacg acccggcctt ggctggtggc cgtcctggtc
     2641 accatgctgg gcatggccgg cctgctggtg gtcgagcaat gggaatgggc gcgggtgcgc
     2701 caggaggccc ggctcgacac cttgaaccgg ctgtcgaccc tgcgcgcccg gctcgagggc
     2761 gagctcaacg gcaccctgct gctgacccgg gcgctgtcgg ccatcatcgc cgttcgccag
     2821 gatgtgacgc gggaggaatt cgacgccatc gcccgcgaga tgatggcgca caagcgccac
     2881 atccggaacg tcaccctggc ccagggcacc gtcatccgct tcgtctaccc gcccgaagga
     2941 aacgaagcgg cggtgggcat cgatttccgc gatctgccgc agcaatggcc ggcggtcgaa
     3001 cgcatgttcc gcacccgcca gcccattctg gccggcccgg tcaccctggt gcagggcggc
     3061 accgccatca tcggccgcac cccggtgttc accacgccgc cgggcggcgc cccgggaagc
     3121 gggccgccat ggggcgcggt ggcgattccc atcacgctgc ccagcctgct ggacgaagcc
     3181 ggactcaccg cttccgacat gaagctctcc atcgccatcc ggggccgtga cggcctgggc
     3241 gccgctggcg aggtgtttca tggcgatccc gccgtgttcg agcgcgatcc ggtgcggctc
     3301 gaggtgaccc tgcccggcgg ccaatgggtg ctggccgccc tgcccaaggg cggctgggac
     3361 caggtgcgct cggtcaccat cctgcaattg cgcaccctgg gcggcggcct gtcgctgctg
     3421 gccggcgtgc tggtgttctt ctgggtgcgc catgccgatt cccgccgcga cgcccgccgc
     3481 cgcgtcgccg ccagcgagaa ccggctgtcg gccatgctgg ccggcgcccc cttcccgctg
     3541 gtggtgctgc gccaggccga cggcgccgtg ctgtacgcca acctgcgcgc cggcaccatg
     3601 gtcggactgg cgccgcaggc gctgatcggc cggccgctgc cgccccgcac cttcgccccg
     3661 cgcgatct
//
LOCUS       DATIKR010000349         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_150855, whole genome shotgun sequence.
ACCESSION   DATIKR010000349 DATIKR010000000
VERSION     DATIKR010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150855"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..899
                     /locus_tag="VLL76_05550"
     CDS             <1..899
                     /locus_tag="VLL76_05550"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSV28998.1"
                     /translation="VVVIEGAGERAFCAGGDIRAVWDARERGEANRNPALFAAEYRLD
                     RLIHHYPKPIVALLDGIVMGGGAGVSVNGRFRVATERTLFAMPECAIGFFPDVGATHF
                     LNRCPGNIGLYLGVTGTRLGPSDCLWAGLATHFVPSAELPALKEALAQGGDVAAILDA
                     AHRDPGPSALAGRAAAVDRCFAAASLREIISNLVAEGADWSWDALDPIGDTCPFSQAV
                     TFRQLREGRGLTFDDAIRREYRLACRFLQRADFYEGIRALVVDKDKSPRWSPQSLADV
                     DPAEIEAMFAPLGEDELEFHPD"
     gene            939..1121
                     /locus_tag="VLL76_05555"
     CDS             939..1121
                     /locus_tag="VLL76_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV28999.1"
                     /translation="MAGRQVYFEFMRQGAYMKVVAIDSVTATEVTIVGPAGASQEQLK
                     LTALRKLEYVLSKQGK"
     gene            complement(1178..1630)
                     /locus_tag="VLL76_05560"
     CDS             complement(1178..1630)
                     /locus_tag="VLL76_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HSV29000.1"
                     /translation="MTDTHSDKANRDELLRMAVDVVSAYVSKNPLPAGQIPEVIHTVY
                     ASLSSLESGPQEAKAEAPKPAVPVKKSVNPDYIVCLEDGKKLKMLKRHLRTTYNMTPD
                     EYRAKWGLPPDYPMVAPNYAMQRSDFAKKIGLGRKAGAEEKAGKRRGR"
BASE COUNT          278 a          564 c          572 g          342 t
ORIGIN      
        1 atgtggtggt gattgagggc gcgggcgagc gtgccttctg cgccggcggc gacatccggg
       61 cggtatggga cgcccgcgaa cgcggcgagg ccaaccgcaa tcccgccctt ttcgccgccg
      121 aataccgcct cgaccgcctg atccaccatt acccgaagcc catcgtggcg ctgctggacg
      181 gcatcgtgat gggcggtggg gccggggtgt cggtcaacgg ccgcttccgc gtcgccaccg
      241 agcgcacgct gttcgccatg ccggaatgcg ccatcggctt ctttcccgac gtgggcgcca
      301 cccatttcct caaccgctgc cccggcaaca tcgggcttta cctcggggtg accggcaccc
      361 gcctgggtcc gtccgactgc ctgtgggccg gcctggccac ccatttcgtg ccatcggcgg
      421 agttgcccgc gctgaaggag gcgttggccc agggcggcga cgtcgccgcc atcctggacg
      481 ccgcccatcg cgatcccggc ccctcggccc tggccgggcg ggccgccgcc gtcgatcgct
      541 gcttcgcggc ggcctcgttg cgcgagatca tctccaacct ggtggcggaa ggggccgact
      601 ggtcgtggga cgcgttggat cccatcggcg acacctgtcc cttcagccag gcggtgacct
      661 tccgccagtt gcgcgagggc aggggattga ccttcgacga cgccatccgc cgcgaatacc
      721 gcctggcctg ccgcttcctg cagcgcgccg acttctatga aggcatccgc gccctggtgg
      781 tggacaagga caagtcgccg cgctggtcgc cgcaatccct ggccgacgtc gatcctgccg
      841 aaatcgaggc gatgttcgcg ccgttgggcg aagacgagct tgaattccac cccgactgag
      901 ggtcatctgg cgcaagttga tccacgaggg tggctgtgat ggccggacgg caggtctatt
      961 tcgagttcat gcggcagggc gcctacatga aggtggtcgc catcgattcg gtgacggcga
     1021 ccgaggtgac catcgtcggc ccggccggcg cgtcgcagga gcaactgaag ctgaccgccc
     1081 tgcgcaagct ggaatacgtg ctgtccaagc agggcaagta gcaaacaaaa aggccgcggt
     1141 gtgggaccgc ggccttttcg tcaaaggtgc cggataatca acggccgcgg cgcttgccgg
     1201 ccttttcctc ggcgccggcc ttgcggccca ggccgatctt cttggcgaag tccgagcgct
     1261 gcatggcgta gttcggcgcc accatcggat agtccggcgg caggccccac ttggcgcggt
     1321 attcgtcggg ggtcatgttg taggtggtgc gcagatgccg cttcagcatc ttcagcttct
     1381 tgccgtcctc aagacagacg atgtagtcgg gattgaccga cttcttgacc ggaacggcgg
     1441 gcttgggcgc ttcggccttg gcctcctgcg ggccgctttc cagcgaggac agcgaggcat
     1501 agacggtatg gatcacttcc gggatttgac ccgccggcaa cggattcttg ctgacatagg
     1561 cggagacgac gtcaacggcc atgcgcagca gttcgtcgcg gttggcctta tcgctatggg
     1621 tatcagtcat tttgatgtcc gaccgaggtt tgtcactggg ctctatcatt gaatccatgc
     1681 ttcgatttgg ctgtcaattc cattctgcca aacctgaata atgatttctt ggaaactcag
     1741 ccgaattcaa taaatc
//
LOCUS       DATIKR010000350         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_78474, whole genome shotgun sequence.
ACCESSION   DATIKR010000350 DATIKR010000000
VERSION     DATIKR010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78474"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(282..1688)
                     /gene="der"
                     /locus_tag="VLL76_05565"
     CDS             complement(282..1688)
                     /gene="der"
                     /locus_tag="VLL76_05565"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HSV29001.1"
                     /translation="MPFTVAIVGRPNVGKSTLFNRLAGRRLAIVHDQPGVTRDRREAP
                     ATLLGMEFTIIDTAGFEDAGGNSVEARMRHQTDMAVHGADVALLLIDARAGVTPLDRH
                     FADHLRRQKTPVILVANKCEGKAGTPGLYEAYGLGLGDPVPVSAEHNEGMAELFDALL
                     PYAKEAGALDDEEEDEDSWPEEVPEGEEPEPETEVRPDRPLQLVIVGRPNVGKSTLVN
                     RLIGEDRMLTGPEAGLTRDAISVEWEHRGRRIRLVDTAGLRRKSNVENPVEKLSVANT
                     LEAIRMAEVVVLVLDADGILDKQDLTIARMVVNEGRALVIAINKWDVVDDPQGALQRL
                     KDRLETSLPQVRGVPTVTMSALTGRGLDRLMDSVQDIHALWNRRVPTAKLNGWLEEMV
                     AHHPPPALQGGRRIKIRYMTQAKARPPTFIIFASKPEELPESYTRYLVNNLRETFKLA
                     GVPIRLFVRGGKNPYAKE"
     gene            complement(1696..>2054)
                     /locus_tag="VLL76_05570"
     CDS             complement(1696..>2054)
                     /locus_tag="VLL76_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV29002.1"
                     /translation="EIGGIQSPWVAGDYLFLVSNNNEAVALDAKTGRAIWVTQLQVWE
                     DEEDREGRIVWAGPVLASDRLVLGSSDGKLASLSPYSGEVLGVLDVSDGVTIPPTVAG
                     RTIYFLTNDADLVAFR"
BASE COUNT          311 a          684 c          711 g          348 t
ORIGIN      
        1 ccaagaagct gaaggaagcg gaagccaaga agtaggatgg accggggggc cgccccgacg
       61 cgcggccccc cggttttacg ttaggcggtt ggccgggtca cgcccacggc tgtccggttt
      121 agcttcgacc ctcggccccc agactcgtca cccccgcgaa ggcgggggtc catagggccg
      181 tccggcttcg cctcaagcca ttgtcccacc gacatttttc gctgcatcca tggatccccg
      241 ccttcgcggg gatgacggtg agggggcgga tgggacaaac cctattcctt tgcgtacgga
      301 ttcttgccgc cgcgcacgaa caagcggatc ggcacgccgg ccagcttgaa ggtttcgcgc
      361 aggttgttga ccaggtagcg ggtataggat tccggcagct cttcaggctt cgacgcgaag
      421 atgatgaagg tcggcggccg ggccttggcc tgggtcatgt agcggatctt gatgcggcgg
      481 ccgccctgca gcgccggcgg cgggtggtgc gccaccatct cctcgagcca gccgttgagc
      541 ttggcggtgg ggacgcggcg gttccacagg gcgtggatgt cctgcaccga atccatcagg
      601 cggtcgaggc cgcgcccggt cagggccgac atggtgaccg tgggcacgcc gcgcacctgc
      661 ggcagcgagg tttccaggcg atccttgagg cgctgcagcg cgccctgggg gtcatcgacc
      721 acgtcccatt tgttgatggc gatgaccagc gcgcggccct cgttgaccac catgcgggcg
      781 atggtcaggt cctgcttgtc gaggatgccg tcggcgtcga gcaccagcac caccacctcg
      841 gccatgcgga tggcttccag ggtgttggcg accgacagct tctcgaccgg gttctcgaca
      901 ttggacttcc ggcgcaggcc ggcggtgtcc accaggcgga tgcggcggcc gcgatgttcc
      961 cattccaccg agatggcgtc gcgggtcagg ccggcctcgg ggccggtcag catgcggtcc
     1021 tcgccgatca ggcggttgac cagggtggac ttgccgacgt tggggcggcc gacgatgacc
     1081 agttgcaacg gccggtcggg gcggacttcc gtttccggct ccggttcttc gccctcggga
     1141 acctcctcgg gccaggagtc ctcgtcctct tcctcgtcgt ccagcgcgcc ggcttccttg
     1201 gcgtagggca gcagggcgtc gaacaattcg gccatgccct cattgtgctc ggccgacacc
     1261 ggcaccgggt cgcccaggcc caggccatag gcctcgtaca ggccgggcgt gcccgccttg
     1321 ccctcgcact tgttggcgac caggatcacc ggcgtcttct ggcgtcgcag gtggtcggcg
     1381 aaatggcggt cgagcggcgt gacgccggca cgggcgtcga tcaagagcag cgccacgtcg
     1441 gcgccatgca ccgccatgtc ggtctggtgg cgcatgcgcg cctcgaccga attaccgccg
     1501 gcatcttcga agccggcggt gtcgatgatg gtgaattcca tgcccagcag cgtcgcgggc
     1561 gcctcgcggc ggtcgcgggt cacacccggc tgatcgtgca cgatcgccag acggcgaccg
     1621 gccagacggt tgaaaagcgt ggacttgccg acgttgggcc ggcccacgat ggcgacggtg
     1681 aaaggcattg cgtccttacc tgaaggcgac cagatcggcg tcgttggtca ggaaatatat
     1741 ggtgcgccca gccacggtgg gagggatggt cacaccgtcg gaaacgtcga gcacgcccag
     1801 cacctcgccg gaatagggcg acagcgacgc cagcttgccg tccgagctgc ccagcaccag
     1861 gcgatccgag gccagcaccg ggccggccca gacgatgcgg ccctcgcggt cctcctcgtc
     1921 ctcccacacc tgcaactggg tcacccagat ggcgcggccg gtcttggcgt cgagcgccac
     1981 cgcctcgttg ttgttgctga ccaggaacag gtagtcgccg gcgacccacg gcgactgaat
     2041 gccgccgatc tcgc
//
LOCUS       DATIKR010000351         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_114080, whole genome shotgun sequence.
ACCESSION   DATIKR010000351 DATIKR010000000
VERSION     DATIKR010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114080"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VLL76_05575"
     CDS             complement(<1..628)
                     /locus_tag="VLL76_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007195445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV29003.1"
                     /translation="MIGHIISWSLRNKLFVVLAGVLLLAWGGWQAAKTPIDVFPDLTA
                     PAITVVTEAHGMAPTDVESLVTFPIETALNGAPGVRRVRSATKIGLSVVTVEFEWGTD
                     LYLSRQVVAERLQLARAALPPDIPAPVMTPAASIMGEILFIALASEKHSGMEVKNVAE
                     QILKRRLLAVPGVAEVLPIGGDTQQFQVTVKPERLADYGLTVNEVIQAL"
     gene            complement(638..>2262)
                     /locus_tag="VLL76_05580"
     CDS             complement(638..>2262)
                     /locus_tag="VLL76_05580"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV29004.1"
                     /translation="LKSMKPIRPFDREHPRMNKTLIALLVAALFVAACDKIPHGHDHD
                     KKPTAEQGGQGHDHAPGAEKLTNFTEHTELFVEFPRLVAGESSAFAVHLTTLADFRAL
                     AAGKVSVILSGGDQPEERFTVETPSQPGIFRPAVQPRQAGERELAIEVVTPQFAVRHE
                     FGPVTVFADRKSADADSQDEHGHEDASSIGFTKELQWKVDFATAEVVRRPIRPAVAAT
                     GLLRARPDGEALLTAPVSGQVQSAGKFPRLGQAVKQGDILAWLAPHLGGETDFAALQA
                     GAIRSRVAFEQAGRERMRMEALFKDEVVPEKYLLDARAAEVMARAEYEAASRRMNQYG
                     GGGGGGIPLRAPVSGLLADVRVSPGAFAEEGALLFHIVDRRVLWLELRVPESEAVRLA
                     TPSGASFRVDGIESAFDIVAGGNGKLIAVGVAVDKVTRSVPVLFEFVAPDPRLFVGMA
                     VNAQVFVAAPREAVAVPASAVLDENGINVVFVMTGGESFERRPVRLGVRDGDWIEVTE
                     GLEPGSRVVSRGAYLVKLASTITDQIGHGHVH"
BASE COUNT          377 a          743 c          765 g          377 t
ORIGIN      
        1 gcaaagcctg tatgacttca ttcaccgtca ggccgtagtc ggccagccgt tcgggtttca
       61 ccgtcacctg gaactgctgc gtgtcgccgc cgatcggcag cacctcggcg acgccgggca
      121 cggcgagcag gcgtcgcttc aagatctgtt cggcaacgtt cttgacctcc atgccggaat
      181 gtttttccga ggccagggcg atgaagagga tttcgcccat gatcgacgcg gcgggcgtca
      241 tcaccggtgc cgggatgtcc ggcggcagcg ctgcgcgtgc cagttgcagg cgctcggcca
      301 ccacctggcg cgacagataa aggtcggtac cccactcgaa ctcgacggtg accaccgaca
      361 ggccgatctt ggttgccgag cgcacgcgcc gcacgcccgg tgcgccgttt aacgccgtct
      421 cgatagggaa ggtgacgagg ctttcgacat ctgtcggcgc catgccgtgc gcctcggtga
      481 ccacggtgat cgcaggcgcg gtgaggtcgg ggaagacgtc aatgggggtt ttcgccgcct
      541 gccagccgcc ccaggccagc agcagcacgc cggcgaggac gacaaagagc ttgttcctga
      601 gcgaccagga gatgatgtgt ccgatcattc cgctctccta gtgcacgtgg ccgtggccga
      661 tctgatcggt aatggtcgaa gccagcttga cgaggtaggc gccgcgcgag acgacgcggc
      721 tcccgggttc cagaccttcc gtcacctcga tccagtcgcc gtcgcgcacg cccaaccgca
      781 ccggacggcg ctcgaaggac tcgccgccgg tcatgacaaa gacgacgttg atgccgtttt
      841 cgtcgagcac ggcggaagcg ggaacagcca ccgcctcgcg cggagcggcg acgaacacct
      901 gcgcattgac cgccatgccg acgaagaggc gcgggtcggg cgcgacgaac tcgaagagca
      961 ccggcacgct gcgcgttacc ttgtccaccg ccacgccaac ggcgatgagc ttgccgttcc
     1021 cgccggcgac gatgtcgaag gcgctctcga tgccgtcgac gcggaagctg gcgccggagg
     1081 gcgtggccaa gcgcaccgcc tcggactcgg gcacacgcag ttcgagccag agcacgcggc
     1141 ggtcgacgat gtggaacagc agtgcgccct cctcggcgaa ggcgccaggg gagacacgca
     1201 catcggcgag cagaccgctc accggggcgc gcaggggaat gccgccaccg ccaccgccac
     1261 catattgatt catgcgccga ctggccgcct cgtactcggc gcgcgccatc acttctgcgg
     1321 cgcgggcatc gagcaggtat ttctccggca ctacttcgtc cttgaacagg gcttccatgc
     1381 gcatgcgttc gcgcccggcc tgttcgaacg ctacccggga gcggatcgcg cccgcctgca
     1441 aggcggcgaa gtcggtctcg ccaccaaggt gcggggccag ccaggcgagg atgtcaccct
     1501 gcttcacggc ctgccccagg cgtggaaact tgccggcgga ctgcacctgc ccgctgaccg
     1561 gtgcggtgag cagcgcctcg ccgtccgggc gagcgcgcaa caggccggtg gcggcaacag
     1621 cgggccggat gggacgcctg acgacttcgg cggtggcgaa gtcgaccttc cattgcagtt
     1681 ccttggtgaa accaatgctg cttgcgtcct cgtgcccatg ctcatcttgg ctgtccgcat
     1741 cggcgctctt gcggtcggcg aaaacggtca ccggcccgaa ctcgtggcgc accgcgaact
     1801 gcggcgtgac gacctcgatg gccagttcgc gctcgccggc ctgccgtggc tgtactgcgg
     1861 gacggaagat gccgggctgg cttggcgtct cgacggtgaa acgctcttcg ggttggtcgc
     1921 cgccggacag gatgacgctc accttgccgg cagcgagggc gcggaaatcg gccagggtgg
     1981 tcagatgcac ggcgaaggct gaactctcgc ccgccacgag gcgcgggaat tcaacgaaca
     2041 gctcggtgtg ctcggtaaag ttcgtcagct tctcggcgcc gggggcatgg tcgtggccct
     2101 gtccgccctg ctcggcggtt ggtttcttgt cgtggtcgtg gccatgggga atcttgtcgc
     2161 aggcggcaac gaacagggcg gcgaccagca gggcaatcaa ggtcttgttc attctgggat
     2221 gctcccggtc aaaaggtcgt ataggtttca tcgacttcaa tc
//
LOCUS       DATIKR010000352         4700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_78507, whole genome shotgun sequence.
ACCESSION   DATIKR010000352 DATIKR010000000
VERSION     DATIKR010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4700
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78507"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VLL76_05585"
     CDS             <1..855
                     /locus_tag="VLL76_05585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HSV29005.1"
                     /translation="LDMIDDIKFVHPKDMQDGVIEIGPNDITTNVPYVDGVYLAFDHH
                     LSETLRVGKKGNHIIDPKAPSAARVVYDYFGGAVRFPAAWDKMMEAVDQGDSAQYSLD
                     DILSPTGWTLLNYIMDARTGLGRFRDFRISNYQLMMNLIDYCRNHTIEDILALPDVKE
                     RTDLYFDHEEKFKDQIKRCSKVHGNCVVLDLRKEETIYAGNRFMVYALYPECNISIHV
                     MWGLKKQNTVFAIGHSIVNRTSNTNVGALCLGYGGGGHQKAGTCQVDNELSDRILKEV
                     VAKINADG"
     gene            complement(859..1851)
                     /locus_tag="VLL76_05590"
     CDS             complement(859..1851)
                     /locus_tag="VLL76_05590"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HSV29006.1"
                     /translation="MNSIGIVGAGAWGTALAATARRAGRNVVLWAHEPDVAGAINATR
                     ENATYLPGVRLDCCARATTDIAQAVAADAVLLVTPAQHLRAACRMAAPHWRPGIAAVI
                     CAKGIEQSTGAMMTEVVAQELPQARVAVLSGPTFAIEVARGLPTAVTLACEDAALGQE
                     LVEAIGTATFRPYLADDLVGAEIGGAVKNVLAIGCGIVEGRGMGDNARAALITRGLAE
                     MTRLAMAKGGRPETMMGLSGLGDLILTASSTQSRNYSLGFALGEGRSLADILGSRKAV
                     TEGVWTAGAVVEMAKGQGIEMPIVAAVDSVLNRGADLDDAIQALLSRPFRAEGL"
     gene            2083..2268
                     /locus_tag="VLL76_05595"
     CDS             2083..2268
                     /locus_tag="VLL76_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29007.1"
                     /translation="MTKGDTVCPHCQSDRARLLSDHLGVVGWCSDCHRPWVPSQKALR
                     PGAPPMKVRVTELRAAV"
     gene            2344..3333
                     /locus_tag="VLL76_05600"
     CDS             2344..3333
                     /locus_tag="VLL76_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020400738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSV29008.1"
                     /translation="MSAFSLLVLAIVALGVLIVALGVKVVPQGFEFTVERFGKYTRTL
                     PPGLHVILPLVDRVGRRLNMMEQVLDVPSQEVITRDNAMVTVDGVVFFQVLDAARAAY
                     EVSQLQVATLNLTMTNIRTVMGGMDLDELLSQRDRINAQLLAVVDEATQPWGVKITRI
                     EIKDIAPPRDLVDSMARQMKAERDKRAAVLEAEGLRQAQVLKAEGEKQANILAAEGRR
                     EAAFRDAEAREREAEAEAKAVAMVSAAVASGDATAINYFIAQRYVEALQAVATAPNQK
                     LVMMPLEASGVIGAIAGIAEIAKDAMGKSGDDALTLTPDMERRPRRRGSVPEA"
     gene            3338..3775
                     /locus_tag="VLL76_05605"
     CDS             3338..3775
                     /locus_tag="VLL76_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014706455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HSV29009.1"
                     /translation="MQVDFWHWLILGFVLIALEVLMPGTFLLWPGIAALLTGILAYMA
                     PGLGWEGHALAFAVLTVAAAFAGRRLYDRLRHPVADEPNLNRRAAQYVGTVHTLSADI
                     VDGTARMKVGDSTWKVTGPDLPAGTRVRVVAVDGIALRVEKAE"
     gene            3772..3909
                     /locus_tag="VLL76_05610"
     CDS             3772..3909
                     /locus_tag="VLL76_05610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29010.1"
                     /translation="MTAHFLLVLLFAALAVVVGRRRPWLGGLMLLVALTALVGLWLAP
                     S"
     gene            3906..4655
                     /locus_tag="VLL76_05615"
     CDS             3906..4655
                     /locus_tag="VLL76_05615"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HSV29011.1"
                     /translation="MTDRPRFRLHVAADLAAGVALTLPKEQSHYLANVMRARVGEAVA
                     VFNGRDGEWRAMVEAVAKNAVTLAVAAQTRPQATEPDLWLLVAPIKKDRVDLVAEKAA
                     ELGVSALWPVFTRRTVMSRVNTERLAAHMIEAAEQCERLTIPELREPVALDKALAGWD
                     AGRILLFLDESGAGAPIADMLATLPAGPLAVLVGPEGGFDDHERALLATLPFARPVSL
                     GPRILRAETAAIAALAVVQAVRGDWRLPPSR"
BASE COUNT          769 a         1642 c         1565 g          724 t
ORIGIN      
        1 ctggacatga tcgacgacat caagttcgtc catcccaagg acatgcagga cggcgtgatc
       61 gagatcggcc ccaacgacat caccaccaac gtgccctatg tggacggcgt ctacctggcg
      121 ttcgaccacc acctgtcgga aaccctgcgc gtcggcaaga agggcaacca catcatcgac
      181 cccaaggcgc cttcggccgc ccgcgtcgtg tacgactatt tcggcggcgc ggtccgcttc
      241 ccggccgcct gggacaagat gatggaggcc gtggaccagg gcgattcggc ccaatactcg
      301 ctggacgaca tcctcagccc gaccggctgg accctgctca actacatcat ggacgcccgc
      361 accggcctgg gccgcttccg cgacttccgc atctcgaact accagttgat gatgaacctc
      421 atcgactatt gccggaatca caccatcgag gacatcctgg cgctgcccga cgtgaaggag
      481 cgcaccgacc tctacttcga ccacgaagag aagttcaagg accagatcaa gcgctgctcg
      541 aaggtccacg gcaattgcgt ggtgctggac ctgcgcaagg aagagaccat ctacgccggc
      601 aaccgtttca tggtctatgc gctctatccc gagtgcaaca tctcgatcca cgtgatgtgg
      661 ggcctgaaga agcagaacac cgtgttcgcc atcggccatt ccatcgtcaa ccgcacctcc
      721 aacaccaacg tcggcgcgct gtgcctgggc tatggcggcg gcgggcacca gaaggccggc
      781 acctgccagg tcgacaacga attgtccgac cgcatcctca aggaagtcgt ggccaagatc
      841 aacgcggacg gctgacgcct acaggccttc ggccctgaag gggcggctca gcagggcctg
      901 gatggcgtcg tcaaggtcgg cgccccggtt cagcacggaa tcgacggcgg cgacgatggg
      961 catttcgatg ccctgcccct tggccatctc gaccacggcg ccggcggtcc acacaccctc
     1021 ggtcacggcc ttgcggctgc ccaggatgtc ggccagcgag cggccctcgc ccagggcgaa
     1081 gcccagggaa tagttacgcg actgggtgga cgacgcggtc aggatcaggt cgcccaggcc
     1141 cgacaggccc atcatcgtct cgggccggcc gcccttggcc atggccagac gggtcatctc
     1201 ggccaggccg cgcgtgatca gggcggcacg ggcgttgtcg cccatgcccc tgccctcgac
     1261 gatgccgcaa ccgatcgcca gcacgttctt gacggcgcca ccgatctcgg cgcccaccaa
     1321 gtcgtcggcc agataggggc ggaaggtggc ggtgccgatg gcctcgacca attcctggcc
     1381 caaagccgca tcctcgcagg ccagggtcac cgccgtgggc aggccgcgcg ccacctcgat
     1441 ggcgaaggtg ggacccgaca gcacggcgac gcgggcctgc ggcaattcct gcgccaccac
     1501 ctcggtcatc atggcgccgg ttgattgctc gatgcccttg gcgcagatca cggcggcgat
     1561 gcccggccgc caatgcggcg ccgccatgcg gcaggctgcg cgcagatgct gggccggggt
     1621 gaccagcagc accgcgtcgg cggccaccgc ctgggcgatg tcggtggtgg cccgcgcgca
     1681 gcaatccagc cgcacgccag gcagataggt ggcattctcg cgggtggcgt tgatggcgcc
     1741 ggcgacatcg ggctcgtgcg cccacagcac cacgttgcgt ccggcccgcc gcgccgtggc
     1801 ggccaaagcc gtgccccagg cccctgcgcc cacgattccg atgctgttca tggtaaccga
     1861 ccctcgatta tcgaaggctt ggttatgccg cgccgcgcta cgcccggcaa caccccagaa
     1921 tggtaaaatt ttagatgata gtgcgccaaa tacatttctt ggccggtgtg acattaatca
     1981 gacaataggg ttgtcgcccg atcagtggca ggaagtatag ttgacattat attgcgcccg
     2041 cgtaaagtcg cggcgatcgc aaccatttcg gatcaccgcg ccatgaccaa gggagacacc
     2101 gtctgccccc attgccagtc cgatcgcgcc cggctgttgt ccgaccatct gggcgtcgtc
     2161 ggctggtgct cggactgcca ccgcccgtgg gttccgtcgc aaaaggctct tcgtcccggc
     2221 gccccgccga tgaaggtgcg ggtcaccgaa ctgcgcgccg ccgtctgacg cgctgattac
     2281 aaacgcgggc cgatcgtcta agctcctcta ccggaacaca gggatcggag ggggttgctc
     2341 atggtgtccg cattcagtct gttggtgctg gccatcgtcg ccttgggcgt gctgatcgtc
     2401 gcgcttggcg tcaaggtggt gccgcagggc ttcgagttca cggtcgaacg cttcggcaaa
     2461 tacacccgca cgctgccgcc cggcctgcac gtgatcctgc cgctggtcga ccgcgtcggc
     2521 cgccgcctca acatgatgga gcaggtgctc gacgtcccca gccaggaggt catcacccgc
     2581 gacaacgcca tggtcacggt ggacggcgtg gtgttcttcc aggtgctcga cgccgcccgc
     2641 gccgcctatg aggtgtcgca gctgcaggtc gccaccctga acctgaccat gaccaacatc
     2701 cgcaccgtga tgggcgggat ggatctggac gaattgctga gccagcgcga ccgcatcaac
     2761 gcccaattgc tggcggtggt ggacgaggcg acccagccct ggggcgtcaa gatcacccgc
     2821 atcgagatca aggacatcgc cccgccgcgc gacctggtcg attccatggc gcggcagatg
     2881 aaggccgagc gcgacaagcg cgccgccgtg ctggaggccg agggcctgcg tcaggcccag
     2941 gtgctgaagg ccgagggtga gaagcaggcc aacatcctgg ccgccgaggg acgtcgcgag
     3001 gccgccttcc gcgacgccga ggcccgcgag cgcgaggccg aggccgaggc caaggcggtc
     3061 gccatggtgt cggcggcggt cgccagcggc gacgccaccg ccatcaacta cttcatcgcc
     3121 cagcgctatg tggaggccct gcaggcggtg gccacggcgc ccaaccagaa gctggtgatg
     3181 atgccgctgg aggcgtcggg agtcatcggc gccatcgccg gcatcgccga gatcgccaag
     3241 gacgccatgg gcaaaagcgg cgacgacgcg ttgacgctga cacccgacat ggaacgccgt
     3301 ccgcgccggc gcggcagcgt gcccgaggca taaggcgatg caggtcgatt tctggcactg
     3361 gctgatcctg ggcttcgtgc tgatcgcgct ggaagtgctg atgcccggca ccttcctgct
     3421 gtggccgggc atcgccgccc tgctgaccgg catcctggcc tacatggcgc cgggtctggg
     3481 ctgggagggc cacgccctgg ccttcgcggt gctgacggtg gccgccgctt tcgccggccg
     3541 ccgcctgtac gaccgcctgc gccacccggt ggcggacgaa cccaacctca accgccgcgc
     3601 cgcccagtat gtcggcaccg tccacaccct gagcgccgac atcgtcgatg gcaccgcgcg
     3661 catgaaggtg ggcgacagca cctggaaggt caccggcccc gacctgcccg ccggcacccg
     3721 cgtgcgggtg gtggcggtgg acggcatcgc gctcagggtc gagaaggccg agtgaccgcc
     3781 catttcctgc tggtcctgct gttcgccgcc ctggccgtgg tggtggggcg gcggcggccg
     3841 tggctgggcg gactgatgct gctggtggcg ctgaccgccc tggtcggatt atggttggcg
     3901 ccatcatgac cgaccgcccg cgcttccgcc tccacgtcgc cgccgacctt gccgccggcg
     3961 tcgccctgac gctgcccaag gaacaatccc actacctcgc caacgtcatg cgcgcccgcg
     4021 tcggcgaggc cgtggcggtg ttcaacggcc gcgacggcga atggcgggcg atggtcgagg
     4081 cggtggcgaa gaacgccgtc accctggcgg tcgcggcgca gacccggccc caggcgaccg
     4141 aacccgatct gtggctgctg gtggcgccca tcaagaagga ccgcgtcgat ctggtggcgg
     4201 agaaggcggc ggaactgggc gtctcggcgc tgtggccggt gttcacccgc cgcaccgtga
     4261 tgagccgcgt caacaccgag cgcctggccg cccacatgat cgaggccgcc gagcaatgcg
     4321 agcgcctgac gatccccgag ctgcgcgagc cggtggcgct ggacaaggcg ctggccggct
     4381 gggatgccgg gcggatcctg ctgttcctcg acgaaagcgg cgcgggcgca cccatcgccg
     4441 acatgctggc gaccctgccc gccggccccc tggcggtgct ggtcggcccc gagggcggct
     4501 tcgacgacca cgagcgggca ctgctggcga ctctgccctt cgcccggccg gtgtcgctgg
     4561 ggccgcgcat cctgcgcgcc gagacggccg ccatcgccgc cctggcggtg gtgcaggcgg
     4621 tcaggggaga ctggcgcctc cccccgtcgc gctgagacct aaccggccga ggccaaccct
     4681 cttcccgtca tcgccgggct
//
LOCUS       DATIKR010000353         3785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_162639, whole genome shotgun sequence.
ACCESSION   DATIKR010000353 DATIKR010000000
VERSION     DATIKR010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162639"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VLL76_05620"
     CDS             <1..251
                     /locus_tag="VLL76_05620"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HSV29012.1"
                     /translation="DLLAEPSGITAFSGARIASRSTHGTGCTLASAIAAGLAQGMELT
                     DAVARARAYVRVAIETAPGLGTGHGPLNHLHTVADFHP"
     gene            345..860
                     /locus_tag="VLL76_05625"
     CDS             345..860
                     /locus_tag="VLL76_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29013.1"
                     /translation="MSLSACTVSWVEPYDAKIADGLETYYTDTARFIAQMQDYATSGD
                     AKGQYANAKQFYLDSGVTLDGLLMRARVADKTGTCVGTNNKLISDLVVKLVDGAKLLK
                     DAGDLQTALEQRPAGNCTVQALYTVKLNNDLMAAIHQHNVTLKPLVAGIVKQTVEQGV
                     RIALTAENSKK"
     gene            870..1202
                     /locus_tag="VLL76_05630"
     CDS             870..1202
                     /locus_tag="VLL76_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29014.1"
                     /translation="MALDIDDLVQQMISAAQPILGAMWQNLENQATSELQGVAQQIVK
                     IAQGVADKEVDEDTAKLLLSMQLNNAVGAIAAATEEVEAAAQDAVNAAMAKVRDTVNA
                     AVGFVLVP"
     gene            1311..3149
                     /locus_tag="VLL76_05635"
     CDS             1311..3149
                     /locus_tag="VLL76_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSV29015.1"
                     /translation="MDFAAASPQMWITLALLGLALALYVSEKLPVEVVSAGLLAVMLV
                     AFQLMPVLGPTGRNLLSPDVLLAGFGNPALIAVMALLVVGEALSRTGALDGIAEAVQV
                     LKLPPWGLVVAVLAVVTVTSAFINDTPVVVMFLPIIQAVALRARMAPGQVMMPLSFAA
                     ILGGMTTLIGSSTNLLVSSALISMGLPELGFFDQTPMGVLLASVGFAYMVVVMPRLLP
                     KRGAPVGATLDGGGKQFVSQCVVPAGSPLAGAQAQAGLFKPLPDITVHLIVREGRPEF
                     PPYDDFVLQPGDTLMVAGTRKALADTAARFPDLLAVPEESVERGRPRDGDGDERVLVE
                     AMVPPTSRFVGFTLDQLGLQRLHNLGALGIERRARMVRGPMSDIRLQSGDVLLLTGRW
                     PDIDQLRGERDLVVVSGSVGALPQVHHARTAILIFIAMLGLSAFGLLPIAVAALLAAT
                     ALVALGALTGRQAIRAIDYKVVLLVGAALALGEAMDVTGAARFMANAILGAMGDVGAW
                     GALVAYFGIVAAITNVLSNNATAVLFTPIGVGLARSLGIDPMLFAIATILASNCSFAT
                     PIGYQTNLLVMGPGHYRFADYVKAGLPLTLLLWAAFAVGAKLVWGL"
     gene            3249..>3785
                     /locus_tag="VLL76_05640"
     CDS             3249..>3785
                     /locus_tag="VLL76_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine aminotransferase"
                     /protein_id="HSV29016.1"
                     /translation="MSDVQRPAARPANPNFSSGPCAKRPGWTLDALKDAALGRSHRAK
                     IGKTKLEEVIERSRAILGIPADYRIGIVPASDTGAVEMALWSLLGERGVDMFAWESFG
                     GEWVTDVTKQLKLPDVRVFKAGYGELPDMTQADFARDVVFTWNGTTSGVRVPNGDWIK
                     ADRQGLTICDATSAVFAMD"
BASE COUNT          578 a         1264 c         1278 g          665 t
ORIGIN      
        1 tggacctgct ggccgagccg tcgggcatca ccgccttctc gggcgcgcgc atcgccagcc
       61 gctcgaccca cggcaccggc tgcaccctgg cctcggccat cgccgccgga ctggcccagg
      121 gcatggagct gacggatgcg gtggcgcggg cgcgggccta tgtgcgcgtg gcgatcgaga
      181 cggcgcccgg gcttgggacg ggacatggcc cgctcaatca cctgcacacg gttgccgact
      241 tccatccata aaggttgcaa cctgcgatcg gaatgctagc ctttcccggc aatttgccga
      301 agggggaggt tccgatgaat tggatggtgc cgctggccgc ggccgtgagc cttagcgcct
      361 gtacggtgtc ttgggtcgag ccctatgacg ccaagatcgc cgacggcctt gagacctatt
      421 acaccgacac ggcgcgcttc atcgcccaga tgcaggatta cgcgacctcg ggcgatgcca
      481 agggccagta cgccaacgcc aagcaattct atctggattc gggcgtcacg ctggatggcc
      541 tgctgatgcg agcccgcgtc gccgacaaga ccggcacctg cgtcggcacc aacaacaagc
      601 tgatctcgga tctggtggtc aagctggtgg acggcgccaa gctgctgaag gatgcgggcg
      661 acctacagac cgcgctggaa cagcggccgg ccggtaattg caccgtccag gcattgtaca
      721 ccgtcaagct caacaacgac ctgatggcgg ccatccacca gcacaacgtc acactgaagc
      781 cgctggttgc cggcatcgtc aagcaaacgg tggagcaggg ggtgcgcatc gccctgaccg
      841 ccgagaacag caagaaatag ggggaaggca tggcattgga catcgacgac ctggtgcagc
      901 agatgatttc ggccgcccag ccgatcctgg gcgccatgtg gcagaatttg gagaaccagg
      961 cgacgtcgga attgcagggc gtcgcccagc agatcgtcaa gatcgcccag ggcgtggccg
     1021 acaaggaagt cgatgaggac acggccaaat tgctgctgtc gatgcagctc aacaatgccg
     1081 tcggcgccat cgccgccgcc accgaggagg tggaggcggc ggcgcaggac gccgtcaacg
     1141 ccgccatggc caaggtccgc gacacggtga acgcggcggt ggggttcgtg ctggttccat
     1201 gagataaata acacttacac ctatgtggta cgtaaaagaa tcaacataga cggtggtgtt
     1261 ttttgcgcgt tggtgctatc tggtgacttc tcgacgtggg gagtgaccag gtggatttcg
     1321 ctgctgccag cccgcaaatg tggatcaccc tggccctgct gggcctggcg ctggcgcttt
     1381 atgtcagcga aaagctgccg gtcgaggtgg tctcggccgg cttgctggcg gtgatgctgg
     1441 tggcgttcca attgatgccg gtcctcggtc ccaccggccg caacctgctg tcgcccgacg
     1501 tgctgctggc cggcttcggc aatcccgcgc tgatcgccgt gatggcgctg ctggtggtgg
     1561 gcgaggcgtt gtcgcgcacc ggcgcgctgg acggcatcgc cgaggctgtc caggtgctga
     1621 agctgccgcc ctggggcttg gtggtggcgg tgttggcggt ggtcaccgtc accagcgcct
     1681 tcatcaacga cactcctgtc gtggtgatgt tcctgcccat catccaggcg gtggcgttgc
     1741 gcgcccgcat ggcgccgggc caggtgatga tgccactgtc cttcgccgcc atcctgggcg
     1801 gcatgaccac gctgatcggc tcgtccacca acctgctggt gtcgtcggcg ttgatctcca
     1861 tgggcctgcc cgagctcggc ttcttcgatc agacgcccat gggcgtgctg ctggcctcgg
     1921 tcgggttcgc ctacatggtg gtggtgatgc cgcgcctgct gcccaagcgc ggcgcgccgg
     1981 tgggtgccac cctggacggc ggcggcaagc aattcgtgtc gcaatgcgta gtcccggccg
     2041 gttcgccgct ggccggcgcc caggcccagg cggggctgtt caagccgctg cccgacatca
     2101 ccgtccatct gatcgtgcgc gagggccggc cggaattccc gccctatgac gacttcgtgc
     2161 tgcagccggg cgacaccctg atggtggccg gcacccgcaa ggccctggcc gacacggcgg
     2221 cgcgttttcc cgatctgctg gcggtcccgg aagaaagcgt cgagcgcggc cgcccgcgcg
     2281 atggcgacgg cgacgaacga gtgctggtcg aggccatggt gccgccgacc tcgcgcttcg
     2341 tcggcttcac cctcgaccaa ttggggctgc agcgcctgca caaccttggt gccctgggca
     2401 tcgagcgtcg cgcccgcatg gtgcgcggcc ccatgagcga catccgcctg caatcgggcg
     2461 acgtgctgct gttgaccggc cgctggcccg acatcgacca gttgcgcggc gagcgcgacc
     2521 tggtggtggt gtcgggcagc gtcggcgccc tgccgcaggt ccatcacgcc cgcaccgcga
     2581 tcctgatctt catcgccatg ctgggcctgt cggccttcgg cctgctgccc atcgcggtgg
     2641 cggcgctgct ggccgcgacc gccctggtgg ccttgggagc gctgaccggg cgccaggcca
     2701 tccgcgccat cgactacaag gtggtgctgc tggtgggcgc cgcgctggcg ctgggcgagg
     2761 cgatggacgt caccggagcc gcgcgcttca tggccaacgc catcctggga gccatgggcg
     2821 acgtgggggc gtggggcgcg ctggtggcct atttcggcat cgtcgccgcc atcaccaacg
     2881 tgctgtccaa caacgccacc gccgtcctgt tcacccccat cggcgtcggc ttggcacgct
     2941 cgctgggcat cgaccccatg ctgttcgcca tcgccaccat cctggcctcg aactgctcgt
     3001 tcgccacccc catcggctat cagaccaacc tgctggtgat gggccccggc cattaccgct
     3061 tcgccgacta tgtgaaagcc ggtctgccgc tgaccctgct gctgtgggcc gcgttcgccg
     3121 tgggggcgaa gctggtgtgg gggctttagg caaacacttc ccttgcctgg cccccggcgc
     3181 ctgctacact ccctgcgggc cacggccccc caacgggccg cgtcccttct gcgagggagg
     3241 gtttccttat gagtgatgtt cagcggccgg ccgctcggcc cgccaatccc aatttctcct
     3301 ctggtccctg cgccaagcgt cccggttgga cgctggacgc gttgaaggac gccgccttgg
     3361 gccggtcgca ccgcgccaag atcggcaaga ccaagctcga ggaggtgatc gaacgttcgc
     3421 gcgccatcct cggcattccc gccgactacc gcatcggcat cgtgccggcg tcggataccg
     3481 gcgcggtcga aatggcgctg tggtcgctgc tgggcgagcg cggcgtcgac atgttcgcgt
     3541 gggaaagctt cggcggcgaa tgggtcaccg acgtcaccaa gcagctcaag ctgccggacg
     3601 tgcgcgtgtt caaggccggc tacggcgagt tgcccgacat gacgcaggcc gatttcgccc
     3661 gcgacgtggt gttcacctgg aacggcacca cctcgggcgt gcgcgtcccc aacggcgact
     3721 ggatcaaggc cgaccgccag ggactgacca tctgcgacgc cacctcggcg gtgttcgcca
     3781 tggac
//
LOCUS       DATIKR010000354         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_42218, whole genome shotgun sequence.
ACCESSION   DATIKR010000354 DATIKR010000000
VERSION     DATIKR010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42218"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VLL76_05645"
     CDS             <1..485
                     /locus_tag="VLL76_05645"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014086044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV29017.1"
                     /translation="FFYPLDFTFVCPSEILAHDHRVKALAEKNVKVVAVSVDSHFTHL
                     AWKNTPVEKGGLGNVQFPLVADLTKDIAKSYGVLLPGGVALRGSFLIDKAGIVQVAHV
                     NNLPLGRNVDEMLRLADALQFHEEHGEVCPAGWQKGKAGMQASPEGVAKYLASHGKDL
                     "
     gene            631..1596
                     /gene="trxB"
                     /locus_tag="VLL76_05650"
     CDS             631..1596
                     /gene="trxB"
                     /locus_tag="VLL76_05650"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSV29018.1"
                     /translation="MATHRTKVLILGSGPAGCTAAIYAARANLDPILVAGLQPGGQLT
                     ITTDVENFPGFAEAIQGPWLMEQMQKQAEHVGAQFLYDTIVSVDLTKRPFVAKGDSGD
                     EYVGDTIVICTGATARWLGIESERTFQGFGVSACATCDGFFFRNKEVAVVGGGNSAVE
                     EAIYLAGIASKVTLVHRRDSLRAEKIAQDRLFANPKVAVKWDSVVDEIVGESNPPGVT
                     GVRLKNVKTGEVETLAVDGVFVAIGHNPNTELFKGAIDIDDEGYIVTKPGTTQTSLPG
                     VFAAGDVQDKTYRQAVTAAGTGCMAALEAERFLAMHGHAAEVAAE"
BASE COUNT          282 a          580 c          518 g          251 t
ORIGIN      
        1 tgttcttcta cccgctcgac ttcaccttcg tctgcccctc cgagatcctg gcccacgacc
       61 accgcgtcaa ggccctggcc gagaagaacg tcaaggtcgt cgccgtgtcg gtcgattccc
      121 acttcaccca cctggcgtgg aagaacaccc ccgtcgagaa gggcggcctg ggcaacgtcc
      181 agttcccgct ggtggccgac ctgaccaagg atatcgccaa gtcctacggc gtgctgctgc
      241 cgggcggcgt cgccctgcgc ggctcgttcc tgatcgacaa ggccggcatc gtgcaggtcg
      301 cccacgtcaa caacctgccg ctgggccgca acgtcgacga gatgctgcgc ctggccgacg
      361 cgctgcagtt ccacgaggag cacggcgagg tctgcccggc cggttggcag aagggcaagg
      421 ccggcatgca ggccagcccc gagggcgtgg ccaagtacct ggccagccac ggcaaggacc
      481 tgtaagcgca ccttcgcgct ttcaagcggg gaagggcgcg gggccagggt tccgcgccct
      541 tctttttgcc gcagcgggct tgcttgcgcc cgcccggccc gcgccctatc cttcgaaccg
      601 aacatccaag acatgccggg gaatgaaccg atggcgaccc accgtaccaa agtgctgatc
      661 cttggctccg gcccggccgg ctgcaccgcc gcgatctatg ccgcgcgcgc caatctcgac
      721 cccatcctgg tggccggcct gcagccgggc ggccagttga ccatcaccac cgacgtcgag
      781 aacttccccg gcttcgccga ggcgatccag ggcccgtggc tgatggagca gatgcagaag
      841 caggccgagc acgtcggcgc ccaattcctg tacgacacca tcgtcagcgt cgacctgacg
      901 aagcggccgt tcgtcgccaa gggcgattcc ggcgacgaat atgtcggcga caccatcgtc
      961 atctgcaccg gcgccaccgc gcgctggctg ggcatcgaat ccgagcgcac cttccagggt
     1021 ttcggcgtct ccgcctgcgc cacctgcgac ggcttcttct tccgcaacaa ggaagtggcg
     1081 gtggtcggcg gcggcaattc ggcggtcgag gaagccatct acctggccgg catcgcctcg
     1141 aaggtgaccc tggtccatcg ccgcgacagc ttgcgggccg agaagatcgc ccaggaccgc
     1201 ctgttcgcca atcccaaggt ggcggtcaag tgggacagcg tcgtcgacga gatcgtgggc
     1261 gagtccaatc cgcccggcgt caccggcgtg cgcctgaaga acgtcaagac cggcgaggtc
     1321 gagaccttgg ccgtggacgg cgtgttcgtc gccatcggcc acaaccccaa caccgagctg
     1381 ttcaagggcg ccatcgacat cgacgacgag ggctacatcg tcaccaagcc cggcaccacc
     1441 cagaccagcc tgcccggcgt gttcgcggcc ggcgacgtcc aggacaagac ctaccgccag
     1501 gccgtcaccg ccgccggcac cggctgcatg gccgcgctgg aagcggaacg attcctcgcc
     1561 atgcatggac atgcggcgga agttgcggca gagtagggcc catacttaag gggtcgtccg
     1621 ccggtatcgt t
//
LOCUS       DATIKR010000355         3137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_53604, whole genome shotgun sequence.
ACCESSION   DATIKR010000355 DATIKR010000000
VERSION     DATIKR010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3137
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53604"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VLL76_05655"
     CDS             <1..531
                     /locus_tag="VLL76_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide synthetase C
                     domain-containing protein"
                     /protein_id="HSV29019.1"
                     /translation="LPAVRTMAAEGKPFTGVLFAGLMVTKDGPKLLEFNVRFGDPECQ
                     VLMARMDSDLLPILLAAAEGRLAGTQVAWKNQAAMVVVMAAKGYPGSYHKNTVIKGLD
                     QANAVEGVAVLHAGTGRNPEGRVVATGGRVLGVTAIGASVRQAQARAYQAVDCIDWPE
                     GFCRRDIGWRAIAREG"
     gene            531..1265
                     /locus_tag="VLL76_05660"
     CDS             531..1265
                     /locus_tag="VLL76_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HSV29020.1"
                     /translation="MRKGARSRAEVPPEVLAALNAGTMETASLPECLAVDFAALMGAV
                     FPAIDPAPLEVAAGDGVTRRMALAAELAAEHLDTMAGHGSDTVRGWACYAIGRRPGWT
                     LAQRLERLRPLADDPHFGVREWAWLALRPHVVAEPRAAIALLAPWTAEASANLRRFAS
                     EATRPRGVWCAHVAALRADPAPGLAVLEPLRADPARYVQDSVANWLNDAGKDHPDWVR
                     DLCQCWTKDGGGKAIAYVVRRACRNL"
     gene            1330..1776
                     /locus_tag="VLL76_05665"
     CDS             1330..1776
                     /locus_tag="VLL76_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019022285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HSV29021.1"
                     /translation="MRILTAAALLAPLLLSPPVLAESYYGKQKVVYHVNTAGGEADKA
                     YLMTLTNVQNHINAVGKDNVEVKIVMHGDGVGLVKDAKSNMDVQAKVMNLKDQKVAFL
                     VCENTLKGRKIDADRDLFDVDKGDIVPSGVAELSRLQQQGYTYIRP"
     gene            complement(1852..2220)
                     /locus_tag="VLL76_05670"
     CDS             complement(1852..2220)
                     /locus_tag="VLL76_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV29022.1"
                     /translation="MTHDWPELAKDLSGLLGQLRGGIPDVMKGFSAMAKAAGADGALD
                     AKTKELVALGIGVAARCDGCITFHTRSARDLGTTREELMEVLGMAIYMGGGPSLMYAA
                     LALEAFDQHVAAKAGETAPA"
     gene            complement(2217..2600)
                     /locus_tag="VLL76_05675"
     CDS             complement(2217..2600)
                     /locus_tag="VLL76_05675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSV29023.1"
                     /translation="MSIASWYGEKYRGKRTASGERFDPMGLTAAHPSLPFGTRLRVTG
                     ADGRDVVVRINDRGPFDRPGGIDLSQAAARRIGLTGTGPVLLSPADDVQVAQAQDGIA
                     PSGVAPWWLDVDDGGRTIHPRGDTR"
     gene            complement(2893..>3137)
                     /locus_tag="VLL76_05680"
     CDS             complement(2893..>3137)
                     /locus_tag="VLL76_05680"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HSV29024.1"
                     /translation="LEGCDLYVTLEPCPMCATAISFARLRRVYFAAYDPKGGGVEHGP
                     RIFTHPTCHHRPEVYGGIRESEAAELLREFFRERRF"
BASE COUNT          511 a         1058 c         1083 g          485 t
ORIGIN      
        1 ctgcccgccg tccgcaccat ggcggccgag ggcaagccct tcaccggcgt gctgttcgcc
       61 ggcctgatgg tcaccaagga cggccccaaa ctgctggaat tcaatgtccg tttcggcgac
      121 ccggaatgcc aggtgctgat ggcccgcatg gactcggacc tgctgccgat cctgctggct
      181 gccgccgagg gcaggctggc gggcacccag gtggcgtgga agaaccaggc cgccatggtg
      241 gtggtgatgg cggccaaggg ctatcccggc agctaccaca agaacaccgt catcaagggc
      301 ctggaccagg ccaacgcggt cgagggcgtc gccgtgctgc atgccggcac cggccgcaac
      361 cccgagggcc gggtggtcgc caccggcggc cgcgtgctgg gcgtcaccgc catcggcgcc
      421 agcgtgcgcc aggcgcaggc gcgggcctat caggcggttg attgcatcga ctggcccgag
      481 ggcttctgcc gccgcgacat cggctggcgc gccatcgccc gcgaaggctg atgcgcaagg
      541 gggcgcgctc ccgcgccgag gtgccgcccg aggtgctggc ggcgctgaac gccggcacca
      601 tggagacggc cagtttgccg gaatgcctgg cggtggactt cgccgccttg atgggcgccg
      661 tcttccccgc catcgatccg gcaccgctgg aagtcgcggc gggcgatggc gtcacccggc
      721 gcatggcttt ggcggccgaa ctggcggcgg agcatctcga caccatggcc gggcatggct
      781 cggacaccgt gcgcggctgg gcctgctacg ccatcggccg ccgccccggc tggaccctgg
      841 cgcagcggct ggagcggttg cggcccttgg ccgacgatcc ccatttcggg gtgcgcgaat
      901 gggcgtggct ggcgttgcgg ccgcacgtgg tggccgagcc gcgggccgcc atcgccctgc
      961 tggcgccatg gaccgccgaa gcctccgcca atctgcgccg cttcgccagc gaggccaccc
     1021 ggccgcgcgg ggtatggtgc gcccatgtgg cggcattgcg ggccgacccg gcgccggggt
     1081 tggcggtgct tgagccattg cgggccgacc ccgcccgcta tgtccaggac tcagtcgcca
     1141 attggctcaa cgacgcgggc aaggatcatc ccgactgggt gcgggatctg tgccaatgct
     1201 ggaccaagga cgggggcggc aaggccattg cctatgtcgt caggcgggcc tgccgcaacc
     1261 tttgaccgaa tgggccggcg gccggggccg ccgtagactt cctcccatac tgtctgggag
     1321 gacaaattca tgcgcatcct gaccgccgcc gccctgctcg ccccgctgct gctgagcccg
     1381 cccgtcctgg ccgagtccta ttacggcaag cagaaggtcg tctatcacgt caacaccgcc
     1441 ggcggcgagg cggacaaggc ctacctgatg acgctgacca acgtacagaa ccacatcaac
     1501 gcggtcggca aggacaacgt cgaggtcaag atcgtcatgc acggcgacgg cgtcggcctg
     1561 gtcaaggacg ccaagtcgaa catggacgtc caggccaagg tgatgaacct gaaggaccag
     1621 aaggtggcct tcctggtgtg cgagaacacg ctgaagggcc gcaagatcga cgccgaccgc
     1681 gatctgttcg acgtcgacaa gggcgacatc gtgccgtcgg gcgtcgccga gctgtcgcgg
     1741 ctgcaacagc agggctacac ctacatccgg ccctagaggg gcgagccagg ctcagacgcc
     1801 gctcgggctt atcgcattct ccgctctgag caggtcagag cggacaatgc tctaggcggg
     1861 ggcggtctcg ccggccttcg ccgccacgtg ctggtcgaag gcctcgagcg ccagcgcggc
     1921 atacatcagc gacggcccgc cgcccatgta gatggccatg cccagcactt ccatcagctc
     1981 ctcgcgggtg gtgccgaggt cgcgggccga ccgggtgtgg aaggtgatgc agccgtcgca
     2041 gcgggcggcg acgccgatgc ccaaagccac cagctccttg gtcttggcgt ccagcgcccc
     2101 gtcggcgccg gccgccttgg ccatggccga gaaacccttc atgacgtcgg gaatgccgcc
     2161 gcgcaactgg ccgagaaggc cggacagatc cttggcgagt tcgggccaat cgtgggtcat
     2221 cgggtgtctc ctcttggatg gatggtccga ccgccatcat ccacgtccaa ccaccacggg
     2281 gctaccccgc ttggtgcaat cccatcctgc gcctgggcga cttgcacgtc gtcggccgga
     2341 ctcagcagca ccgggccggt gccggtcagc ccgatcctgc gggcggcggc ctgcgacagg
     2401 tcgatgccgc cggggcggtc gaacggccca cggtcgttga tccgcaccac cacatcgcgg
     2461 ccgtccgcgc cggtcacccg caagcgggtg ccgaacggca ggctgggatg ggcggcggtc
     2521 agccccatgg gatcgaaccg ctcgccgctg gcggtccgct tgccccggta tttctcgccg
     2581 taccaggacg cgatggacaa gtcaccggcg gaagcttcga aaatagatga acaagcgacc
     2641 gcaagcgccg ccaaaactat gagcattttt tgcattgtcg tgttgccatg accggcgccc
     2701 cgttccccgt agaccagtat agggggcggc taagtcattg caacaaatgc agattatgct
     2761 gctttaacgg caattttatg tgtgatccga cgagaatgaa gaacacgaag ggccccaaga
     2821 gagcccctcc cggggcaggc gggatgccac ccggcacgcc aacttcgtgt ccttcgtgtt
     2881 cttcgtggtt catcaaaacc gcctctcccg gaaaaattcc cgcagcagtt ccgccgcctc
     2941 gctttcccgg atgccgccat agacctccgg gcggtggtgg caggtggggt gggtgaagat
     3001 gcgggggccg tgttcgacgc cgccgccctt ggggtcgtag gccgcgaaat agacgcggcg
     3061 gaggcgggcg aacgagatgg cggtggcgca catggggcag ggttccagcg tcacatagag
     3121 gtcgcagccc tcgagcc
//
LOCUS       DATIKR010000356         2642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_150947, whole genome shotgun sequence.
ACCESSION   DATIKR010000356 DATIKR010000000
VERSION     DATIKR010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150947"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VLL76_05685"
     CDS             <1..703
                     /locus_tag="VLL76_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV29025.1"
                     /translation="ALDLLAHVDADDPALVADFGCGTGNVTRLLGERWRRARVIGVDS
                     SAEMLAEAGEGEWVRADIGTWACDRPLDVLFSNAALHWLDDHAVLFPRLMGMLAPGGT
                     LAVQMPRNHGAPSHTCMVEAAQAGQWAGRLAGVLRPNPVAEPSFYYDVLAPLAARLDI
                     WETEYLQVLDGDNPVVKWTMGTALKPLLDALDEPEKSAFLADYSARIAAAYPKRADGK
                     TLFPFRRLFLVARGH"
     gene            complement(797..2002)
                     /locus_tag="VLL76_05690"
     CDS             complement(797..2002)
                     /locus_tag="VLL76_05690"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HSV29026.1"
                     /translation="MTDSHIPTDSAARPVIRFQKGRSKRFRGGHPWAFSNEIEMTAEA
                     KALPPGSLVTLADAGEEKLAVATFNPHSLIAARVLSRDAAQVVDADFLAARLRAAMAL
                     RDTLFDAPYYRLVHSEADLLPGLIVDRYGDVFTVQANTAGMERLTPLLVEALAALGAK
                     AVVLRNDSPVRGLEGLDQHHRVALGEMAGPVELVENGCRFVADLTEGQKTGWFYDQRD
                     NRAFMARLAKGRRVLDVYTYAGGFAVTAAMAGAAEVVAVDRSEHSLALASRAAELNNV
                     KLRVARAEAFAEMARLDAAGERFGVVIVDPPAFVKSKKDLHAGAKGYRKMARLAAPLV
                     EAGGFLLCASCSHHMPADLFAEEIAHGLHQAGRSGRIIRTAGAAPDHPLHPQLPESAY
                     LKAVVLQLD"
     gene            2289..>2642
                     /locus_tag="VLL76_05695"
     CDS             2289..>2642
                     /locus_tag="VLL76_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSV29027.1"
                     /translation="MSTNTDATRYCEDVVKKFVLAAIFWGVVGFLAGDFIAWQLAFPA
                     LNLDLEWTSFGRLRPVHTSAVIFAFGGNILFSTSFYVVQRTSRAELFGGSGFGNFIFW
                     NFQALIVVAALTYVLG"
BASE COUNT          406 a          867 c          933 g          436 t
ORIGIN      
        1 ggcgctcgac ctgctggccc atgtggacgc ggacgatccg gcgctggtgg ccgatttcgg
       61 ctgcggcacc ggcaacgtca cccgcctgct gggcgagcgg tggaggcggg cgcgggtgat
      121 cggcgtcgat tcctcggccg agatgctggc cgaggcgggc gagggggagt gggtacgggc
      181 cgacatcggc acgtgggcct gtgaccggcc gctggacgtg ctgttttcca acgccgccct
      241 gcactggctg gacgaccacg ccgtcctgtt cccccgcctg atgggcatgc tggcgcccgg
      301 cggcaccctg gcggtgcaga tgccgcgcaa tcacggcgcc ccgtcgcaca cctgcatggt
      361 cgaggccgcc caggccgggc agtgggccgg ccgactggcg ggggtgctgc gccccaaccc
      421 ggtggccgag ccgtccttct attacgacgt cctggcgccg ctggcggcgc ggctcgacat
      481 ctgggaaacc gagtatctgc aggtgctgga cggcgacaac ccggtggtca agtggaccat
      541 gggcacggcg ctgaagccgc tgctggacgc cctggacgaa ccggaaaagt cagccttcct
      601 ggccgactat tccgcccgca tcgccgccgc atatcccaag cgggccgacg gcaagacgct
      661 gtttccgttc cgccggctgt tcctggtggc gcgggggcat tgataattgg cccacgtggg
      721 caaataaccg ggatccgccc gtgcctgaaa gatgcttcgc tgcgctcagc atgacaaagc
      781 ggggcagcgc gaccggtcaa tccaactgca gcaccaccgc cttcaggtac gcgctttccg
      841 gcaattgcgg gtgcagcggg tggtcggggg cggcgccggc cgtccttatt atacggcccg
      901 agcggccggc ctggtgcagg ccgtgggcga tttcctcggc gaacaaatcg gccggcatgt
      961 ggtgcgagca cgaggcgcac agcaggaagc cgcccgcttc caccagcggc gccgccagcc
     1021 gcgccatctt gcgatagccc ttggcgccgg catgcagatc cttcttcgac ttcacgaagg
     1081 cgggcggatc gacgatcacc acgccgaagc gctcgccggc ggcgtcgagc cgggccatct
     1141 cggcgaaggc ctcggcgcgg gccacccgca gcttcacgtt gttgagttcg gccgcccgcg
     1201 acgccagcgc cagcgagtgt tcggagcggt cgaccgccac cacctcggcg gcgccggcca
     1261 tggcggcggt caccgcgaag ccgccggcat aggtgtagac gtcgagcacg cggcggccct
     1321 tggccaggcg ggccatgaag gcgcggttgt cgcgctggtc atagaaccag ccggtcttct
     1381 ggccctcggt caggtcggcg acgaagcggc agccgttctc gaccagctcg accggcccgg
     1441 ccatctcacc caaagcgacg cggtgatgct ggtccaatcc ttccagcccg cgcaccgggc
     1501 tgtcgttgcg cagcaccacc gccttggcgc ccagggccgc cagcgcctcg accagcagcg
     1561 gcgtcagccg ctccatgccg gcggtgttgg cctggacggt gaagacgtcg ccgtagcggt
     1621 cgacgatcag gcccggcagc aggtcggcct cggaatggac caggcggtaa tagggggcgt
     1681 cgaacagggt gtcgcgcagc gccatggcgg cgcgcaggcg ggcggcgagg aaatcggcat
     1741 ccaccacctg ggcggcgtcg cggctgagga cgcgggcggc gatcagcgaa tgggggttga
     1801 aggtggcgac ggccagcttc tcctcgccgg cgtcggccag ggtgaccagc gaaccgggcg
     1861 gcagcgcctt ggcctcggcg gtcatttcga tctcgttgga aaaggcccag gggtggccgc
     1921 cgcggaagcg cttcgagcgc cccttctgga agcggatcac gggacgggcg gcggaatcgg
     1981 tggggatatg gctgtcggtc atggggggca actctaatgg agggggcttt ctccgacaat
     2041 cgtttgaggc gaagccgccc gaaaggagag gcggtttacg aagaagttcc gacaagccca
     2101 cgagatacca gtaaattttg tgggatttga tctggatcaa tggccggggg cttgtcagcg
     2161 gtcatagtgc gcgaacttgg agcaagaccg tccggccggc agtcggttca cgggggcatg
     2221 tcatttgcca tggacaccag ccggacgctc cgaggctgac cctttcccgg tcgaaacagg
     2281 agttcggcat gagcaccaac accgacgcca cgcgctattg tgaagacgtg gtgaagaagt
     2341 tcgtccttgc ggcgattttc tggggtgtgg ttggcttcct ggctggcgat ttcatcgctt
     2401 ggcagctcgc cttcccggcc ctcaaccttg acctcgagtg gacgagcttc ggccgtctgc
     2461 gcccggtcca cacctccgcc gtgatcttcg cgttcggcgg caacatcctc ttctcgacgt
     2521 cgttctacgt cgtgcagcgc accagccgcg ccgaattgtt cggcggctcg ggcttcggca
     2581 acttcatctt ctggaacttc caggcgctga tcgtcgtcgc cgcgctgacc tacgtgctcg
     2641 gc
//
LOCUS       DATIKR010000357         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_198913, whole genome shotgun sequence.
ACCESSION   DATIKR010000357 DATIKR010000000
VERSION     DATIKR010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198913"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VLL76_05700"
     CDS             complement(<1..280)
                     /locus_tag="VLL76_05700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HSV29028.1"
                     /translation="MAKVVALVVAAGRGRRFGGDIPKQYQDLAGRPVLRHTLAAYAVN
                     PEVDAVRAVIHPDDRELYDAAAAGLGVLAPVHGGETRQDSVRLGLESLA"
     gene            380..1171
                     /gene="ccsA"
                     /locus_tag="VLL76_05705"
     CDS             380..1171
                     /gene="ccsA"
                     /locus_tag="VLL76_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HSV29029.1"
                     /translation="MSMHALTAFALLSLLPAALVPLRAGAGRDGAFWAVTALAVAGPA
                     ALASALVAGAWQTDLGTTLWVSIAASAALFGVVALGTRFGWRLAPLLMPYLAVMGLLA
                     HVVRGEPKPMVGGAPALWVDLHILVSVLTYGLLTLAAVASLGVFLQERALKRKRPTRL
                     TRMLPSVVDGERLADRLLVASEAVLGLGLATGMATQYFETGVLLQLGHKTLLSLVAFV
                     LIGALLAGHRVCGVRGRMAARVVLVAYLLVTLAFPGVKFVTQVLL"
     gene            1253..>1611
                     /locus_tag="VLL76_05710"
     CDS             1253..>1611
                     /locus_tag="VLL76_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HSV29030.1"
                     /translation="MNITPRKTLSVGPVSLANPVILAPMSGVTDMPFRRIVKRMGAGL
                     VVSEMIASQAMIRANKQTMKMASNCAEEHPMSVQLAGCEPDAMAEAARMNQDRGAAII
                     DINMGCPVKKVAVKGEAG"
BASE COUNT          220 a          556 c          556 g          279 t
ORIGIN      
        1 cggccaggct ttccaggccc agccgcaccg aatcctggcg agtctcgccg ccatggaccg
       61 gcgccagcac gcccaggccg gcggcggcgg catcgtacag ctcgcggtcg tcgggatgga
      121 tgaccgcccg cacggcgtca acctcgggat tgacagcgta ggcggcaagg gtgtggcgca
      181 gcaccgggcg gccggcaagg tcctggtatt gcttgggaat gtcgccaccg aagcggcgcc
      241 cgcgccccgc cgccaccacc aacgccacca ccttcgccat cgtgccctcc attccggaag
      301 cgggcagggt aaggcgacgg cgcccgcctg ccaagaggcc ccctttccgg cgcggccaac
      361 aacgcttata gtcccggcca tgtccatgca cgccttgacc gccttcgcct tgctttcgct
      421 gctgccggcc gcgctggtgc cgttgcgcgc cggtgccggg cgcgatggcg cgttctgggc
      481 ggtcaccgcg ctggcggtcg ccggtccggc ggccttggcg tcggccctgg tggcgggggc
      541 gtggcagacc gatctgggaa ccaccttgtg ggtcagcatc gccgccagcg ccgccttgtt
      601 cggcgtggtc gcgctgggga cccgcttcgg ctggcggctg gcgccgctgc tgatgcctta
      661 tctggccgtc atggggctgc tggcccatgt ggtgcggggc gaacccaagc ccatggttgg
      721 cggcgccccc gcgctgtggg tcgacctgca catcctggtg tcggtgctga cctatggcct
      781 gctgaccctg gccgccgtcg cctcgctggg ggtgttcctg caggaacgcg cgctcaagcg
      841 caagcggccg acccgcctga cccgcatgct gccgtcggtg gtggacggcg aacgcctggc
      901 cgaccgcctg ctggtcgcgt ccgaggcggt gctgggcctg ggcctcgcca ccggcatggc
      961 gacccagtat ttcgagaccg gcgtgctgct gcaactgggc cacaagaccc tgctgtcgct
     1021 ggtcgccttc gtattgatcg gcgccctgct cgccggtcat cgggtgtgcg gcgtgcgtgg
     1081 tcgcatggcg gcccgcgtgg tgctggtggc ctatttgctg gtgaccctgg ctttccccgg
     1141 cgtcaaattc gtcacgcagg tgctgcttta gaggcagttg gcgagaaaat gttcacacgc
     1201 ccaaagcttt tgccgttgct ttgggcgccg cctgcataat aaatacgcag ccatgaatat
     1261 cactccgcgc aagacacttt cggtcggccc ggtatccctg gccaatccgg tcatcctggc
     1321 gcccatgtcg ggcgtcaccg acatgccgtt tcgccgcatc gtcaagcgga tgggcgccgg
     1381 cctggtggtc tccgagatga tcgccagcca ggccatgatc cgcgccaaca agcagaccat
     1441 gaagatggcc agcaattgcg ccgaggagca ccccatgtcg gtgcagttgg ccggctgcga
     1501 gcccgacgcc atggccgagg cggcgcgcat gaaccaggat cgcggcgccg ccatcatcga
     1561 catcaacatg ggctgcccgg tcaagaaggt ggcggtcaag ggcgaggctg g
//
LOCUS       DATIKR010000358         3625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_102340, whole genome shotgun sequence.
ACCESSION   DATIKR010000358 DATIKR010000000
VERSION     DATIKR010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3625
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102340"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..1192)
                     /locus_tag="VLL76_05715"
     CDS             complement(59..1192)
                     /locus_tag="VLL76_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV29031.1"
                     /translation="MLLRAVLTLALGLLGFQASAEDIRIGAFLSSTGQMSLMGDPEKK
                     ALEMLVEDANAKGGILGRKLSLTLYDDGSDPDKAVSAVKRLIDSDKVDLIIGGSGTPT
                     SLAVLNVVERAEIPYLSLGGGIGIVDPVRKWTFKFPHTDRMAAEKVLIDLKRRGISQL
                     ALLSENVGFGRSGRDQVLKLAPEYGIAIVADETYGPKDPDVTPQLTKIRSNPKAQALF
                     VFGTGQGPAVVTRNIRQLGLKIPVYQSHGVASKDFLRLVGSAADGMRLPAAGMAVPDQ
                     VRADDPQKPVVMAFKKAYEARWKEEVVYFAGHSYDAFWVAMEAIQRAGTTDKARVRDE
                     IEKTKGFVGTGGIVTMSPTDHLGLGLDAFHMVEVRNGDWVLVD"
     gene            complement(1216..3249)
                     /locus_tag="VLL76_05720"
     CDS             complement(1216..3249)
                     /locus_tag="VLL76_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HSV29032.1"
                     /translation="MPQRVRGPFPWLAAAFAANVVVTVAAAYFLGRGVVDHEELTALT
                     LVSVSGAAALFALSWKIVDYQMVRAIRRMAAEVRAIAHGGSREGVDADRYGVVSPLPE
                     AVNELCVRLVQARKELAEGLSAATARAEETSTRLAAILNDLHEGVVVCNLKHQVVLYN
                     QVATDMLHAEMGQLGLGRSLLESVAREPVVHMLEVLTHRPELGGRGTPFLAGTSDGRM
                     LLQARMTLIRSGDEATGYVVTLVDAGQQIEALGQRDVLLREVAEGLELPLKRLKAAAG
                     DAEVVAREAAAIEKSIKRVTDGYSRALSGWWPMSDLSSPDLFGFICRRFEGEVVKINL
                     TDLPVWLHGDSHSLVLALEALIRQVVGKTGVGEIDLAASCTDDEAFLDIRWRGAAVAD
                     DVLTGWLSQPLPALGGMTVRDVLMHHAGDAIDQSQRDGWAGLCLPMRKGVEVQFKPKE
                     VLPTRRPEFYDMSLLQQARDTGEFGGVPLKSLTFVVFDTETTGLQPSQGDQIVQIGAV
                     RVVNGRILSGEGFNRIVNPGRPIPPASIVFHGITDEMARDKPPIGVVLPQFKAYASDA
                     ILVAHNAAFDLKFLKMRERECGVRFDNPVLDTMILSNYLDGPEAGHSLDSICERFGIE
                     ITDRHTALGDAIVTAAVLLRQIEALEARGLHTLDDVVKAVDITMQLHQRQMAL"
     gene            3378..>3625
                     /locus_tag="VLL76_05725"
     CDS             3378..>3625
                     /locus_tag="VLL76_05725"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSV29033.1"
                     /translation="MKRALLVVNRKSRSGGADLSAIVERLAEGGVATVERDCADPVEL
                     SPLIAAEGRAMDLVIVGGGDGTLNRALEGLVAADRPLGL"
BASE COUNT          571 a         1233 c         1241 g          580 t
ORIGIN      
        1 ccggacagcc gtgggtcaag cccggcgatg acgatgtttt gttgggctat gacgggcctt
       61 aatccaccag cacccaatcc ccgttcctga cctcgaccat gtggaaggca tccaggccca
      121 ggcccagatg gtcggtgggg ctcatggtga cgatgccgcc ggttccgacg aagcccttgg
      181 tcttctcgat ctcgtcgcgc acgcgggcct tgtcggtggt gccggcgcgc tggatggcct
      241 ccatggcgac ccagaaggca tcgtaggaat ggccggcgaa atagaccacc tcttccttcc
      301 agcgcgcctc gtaggccttc ttgaacgcca tcaccaccgg cttctgggga tcgtcggcgc
      361 ggacctgatc gggcacggcc atgccggcgg cgggcaggcg catgccgtcg gcggcgctgc
      421 cgaccaggcg caggaagtcc ttcgaggcga cgccgtgcga ctggtagacc gggatcttga
      481 ggccaagctg acggatgttg cgggtcacca ccgccgggcc ctggccggtg ccgaacacga
      541 acagggcctg ggccttgggg ttcgagcgga tcttggtcag ttgcggcgtg acgtcggggt
      601 ccttggggcc ataggtctcg tcggcgacga tggcgatgcc gtattcggga gccagcttca
      661 gcacctggtc gcggcccgac cggccgaagc cgacgttctc ggacaacagc gccagttgcg
      721 aaatgccccg ccgcttgagg tcgatcagca ccttttccgc cgccatgcgg tcggtgtggg
      781 ggaacttgaa ggtccacttg cgcaccggat cgacgatgcc gatgccgccg cccagcgaca
      841 gatagggaat ctcggcgcgc tcgaccacgt tcagcacggc caaactggtg ggcgtgccgg
      901 aaccgccgat gatcaggtcg accttgtcgc tgtcgatcag ccgcttgacg gcgctgaccg
      961 ccttgtcggg gtccgagccg tcgtcataca gcgtcagcga cagcttgcgg ccgaggatgc
     1021 cgcccttggc gttggcgtcc tcgaccagca tctccagcgc cttcttttcc gggtcgccca
     1081 tcagcgacat ctggccggtg ctggacagga aggcgccgat gcggatgtcc tcggccgagg
     1141 cctggaatcc cagcaacccg agggcaagtg tcaagacggc acgcagcagc atggaaaagg
     1201 cgccctccgg cattatcaca gcgccatctg gcgctggtgc agttgcatgg tgatgtcgac
     1261 cgccttgacc acgtcgtcga gggtgtgcag gccgcgcgcc tccagcgcct cgatctggcg
     1321 cagcagcacc gccgccgtga cgatggcgtc gcccaaggcg gtgtggcggt cggtgatctc
     1381 gatgccgaag cgctcgcaga tagagtccag cgagtgcccg gcctcggggc cgtccaggta
     1441 gttggacagg atcatggtgt ccagcaccgg attgtcgaac cggacgccgc actcgcgctc
     1501 gcgcatcttc aggaatttga ggtcgaaggc ggcgttgtgg gcgaccagga tggcgtccga
     1561 cgcataggcc ttgaactgcg gcagcaccac gccgatgggc ggcttgtcgc gtgccatctc
     1621 gtcggtgatg ccgtggaaga cgatggatgc cggcgggatc gggcggccgg gattgacgat
     1681 gcggttgaag ccctcgcccg acaggatgcg gccgttgacc acccgcacgg cgccgatctg
     1741 cacgatctgg tcgccctggc tgggctgcag gccggtggtc tcggtgtcga acaccacgaa
     1801 ggtcagcgac ttcaacggca cgccgccgaa ctcgccggtg tcgcgggcct gctgcagcag
     1861 cgacatgtcg tagaattccg gccgccgcgt cggcagcact tccttgggct tgaactgaac
     1921 ctcgacgccc ttgcgcatgg gcaagcacag gccggcccag ccgtcgcgct ggctctggtc
     1981 gatggcgtcg ccggcatggt gcatcagcac gtcgcgcacg gtcatgccgc ccagcgccgg
     2041 cagcggctgg ctcagccagc cggtcagcac gtcgtcggcc accgccgcgc cgcgccatcg
     2101 gatgtcgagg aaggcctcgt cgtcggtgca cgacgccgcc aggtcgatct cgcccacgcc
     2161 ggtcttgccg accacctgac ggatcaaggc ctccagcgcc agcaccagcg aatgggaatc
     2221 gccgtgcagc cacaccggca gatcggtcag gttgatcttg accacctcgc cctcgaagcg
     2281 gcggcagatg aagccgaaca gatcgggcga gctgaggtcg ctcatgggcc accagccgga
     2341 cagggcgcgg ctgtagccgt cggtgacgcg cttgatggac ttctcgatgg cggcggcctc
     2401 gcgcgccacc acctcggcat cgccggcggc ggccttcagg cgcttgagcg gcagttccag
     2461 cccctcggcc acctcgcgca gcagcacgtc gcgctggccc agggcctcga tctgctggcc
     2521 ggcatccacc aaggtgacga cgtagccggt ggcctcgtcg ccgctgcgga tcagcgtcat
     2581 acgcgcctgc agcagcatgc ggccgtctga ggtgccggcc aggaagggcg tgccgcgccc
     2641 gcccagttcg gggcggtggg tcagcacttc cagcatgtgg accaccggct cgcgcgccac
     2701 gctttccagc agcgaacggc ccaggcccaa ctgccccatc tcggcatgca gcatgtcggt
     2761 ggcgacctgg ttgtacagca ccacctgatg cttgaggttg cacaccacca cgccttcgtg
     2821 aaggtcgttg aggatggcgg ccaggcgggt cgaggtctcc tcggcccgcg cggtggcggc
     2881 gctcaggccc tcggccaatt ccttgcgggc ctgcaccagt cggacacaca actcgttcac
     2941 cgcctcgggc aacggcgaca ccacgccgta gcggtcggcg tccacgccct cgcgcgagcc
     3001 gccatgggcg atggcgcgca cctcggccgc catgcgccgg atcgcgcgga ccatctggta
     3061 gtccacgatc ttccacgaca gcgcgaacag cgccgccgcg cccgacaccg acaccagggt
     3121 cagcgcggtc agttcctcgt ggtccaccac gccgcggccc aggaaatagg cggcggccac
     3181 ggtgacgacg acgttggccg cgaacgcggc ggccagccag gggaaaggtc cccgaacgcg
     3241 ttggggcacc ggacgctccc tcgttgtgct tttttgttga acaacgttct agcacggccg
     3301 ccagatcagg caaacccgca gtggggaacc gcccgcccct tcgggcgttc tcctatacac
     3361 atcgttgcgg agggctgatg aaacgcgccc tgctggtcgt caaccgcaag agccgcagcg
     3421 gaggcgccga cctgtcggcc atcgtcgagc ggctggccga gggtggcgtc gcgacagtcg
     3481 agcgcgactg cgccgacccc gtcgaattgt cgccgctgat cgccgccgag ggccgcgcca
     3541 tggatctggt gatcgtgggc ggcggtgacg gcaccctgaa ccgggcgctg gagggattgg
     3601 tcgcggccga ccggccactg gggct
//
LOCUS       DATIKR010000359         2153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_162703, whole genome shotgun sequence.
ACCESSION   DATIKR010000359 DATIKR010000000
VERSION     DATIKR010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162703"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1682
                     /locus_tag="VLL76_05730"
     CDS             <1..1682
                     /locus_tag="VLL76_05730"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390194.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HSV29034.1"
                     /translation="NKAIKLGEKHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALV
                     KFKKLAGGGYFKIINRMVPEALRTLGYAEGDIAEIIRYAVGHGTLKDAPHVNHQSLAA
                     KGFDADTLARVEQSLESAFDIKFVFNKYTLGEQFCTDTLGIEKAKLDDLSFDLLQHLG
                     FTKEQIEQANTFCTGAMTLEGAPFLKAEHLPVFDCASPCGKIGKRFLSADSHIRMMAA
                     AQPFISGAISKTINMPNSASVEECKGAYMLSWRLGLKANALYRDGSKLSQPLQAALLD
                     DVELEAEIAEAPLAARAEIVAERIVERVIAASRRKLPDRRKGYTQKAIVGGHKVYLRT
                     GEYDDGKVGEIFIDMHKEGAAFRAMMNNFAIAISIGLQYGVPLEEFVEAFTFTRFEPQ
                     GMVEGNETIKMATSILDYIFRELAISYLGRNELAHVEPADLTPDTVGRGNNAEGSQLG
                     GLVERVASKGYVRSKLVVLKGGNGGIATAASLSADLGGAASQMTAQSAVAVAVDTDTL
                     IQAFDARAEQIRAARMKGYEGDACPECGNFTLVRNGTCLKCDTCGGTTGCS"
     gene            1884..>2153
                     /locus_tag="VLL76_05735"
     CDS             1884..>2153
                     /locus_tag="VLL76_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012279509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29035.1"
                     /translation="MPKPSPHPQLLKTLRSLPATGEGGFEGFLRDAVAAIVRRHLSLV
                     KSGPQGGIDNGTPPEDGQSSIGVEAKRYGAKNSLPLDQLKAKLTDA"
BASE COUNT          408 a          741 c          671 g          333 t
ORIGIN      
        1 ggaacaaggc gatcaagctc ggcgagaagc acggctaccg caacgcgcag gccaccgtga
       61 tcgcgccgac cggcacaatc ggcctggtga tggattgcga caccaccggc atcgagcccg
      121 acttcgccct ggtgaagttc aagaagctgg ccggcggcgg ttacttcaag atcatcaacc
      181 gcatggtccc cgaggcgctg cgcaccctgg gctacgccga gggcgacatc gccgagatca
      241 tccgctatgc ggtcggccac ggcaccttga aggacgcgcc gcacgtcaac caccagagcc
      301 tggcggccaa gggcttcgac gccgacaccc tggcccgcgt cgagcagtcg ctggaaagtg
      361 ccttcgacat caagttcgtg ttcaacaagt acaccctggg cgagcagttc tgcaccgaca
      421 ccctgggcat cgagaaggcc aagctggacg acctgtcctt cgacctgctg cagcacctgg
      481 gcttcaccaa ggagcagatc gagcaggcca acaccttctg caccggcgcc atgacccttg
      541 agggcgcgcc gttcctgaag gccgagcacc tgccggtgtt cgactgcgcc agcccgtgcg
      601 gcaagatcgg caagcgcttc ctgtcggccg acagccacat ccgtatgatg gcggcggcgc
      661 agccgttcat ctcgggcgcc atctcgaaga ccatcaacat gcccaactcg gcctcggtcg
      721 aggaatgcaa gggcgcctac atgctgtcgt ggcgcctggg cctgaaggcc aacgcgctgt
      781 accgcgacgg ctcgaagctg tcgcagccgc tgcaggccgc cctgctcgac gacgtcgagc
      841 tggaagccga gatcgccgag gcgccgctgg ccgcgcgcgc cgagatcgtg gccgagcgca
      901 tcgtcgagcg cgtgatcgcc gccagccgcc gcaagctgcc ggatcgccgc aagggctaca
      961 cccagaaggc catcgtcggc ggccacaagg tttatctgcg caccggcgaa tacgacgacg
     1021 gcaaggtcgg cgagatcttc atcgacatgc acaaggaagg cgccgccttc cgcgccatga
     1081 tgaacaactt cgccatcgcc atctcgatcg gcctgcaata cggcgtgccg ctcgaggaat
     1141 tcgtcgaggc cttcaccttc acccgcttcg agccgcaagg catggtcgag ggcaacgaga
     1201 ccatcaagat ggcgacctcg atcctcgact acatcttccg cgagctggcg atttcctacc
     1261 tgggccgcaa cgagctggcc catgtggaac ccgccgacct gacccccgac accgtcggcc
     1321 gcggcaacaa cgccgagggc tcgcagttgg gcggcctggt cgagcgcgtc gcctcgaagg
     1381 gttacgtccg ctcgaagctg gtggtgctga agggcggcaa cggcggcatc gccaccgccg
     1441 cttcgctgtc ggccgacctg ggcggcgccg cgtcgcagat gacggcgcaa tcggcggtcg
     1501 ccgtcgcggt tgacaccgac accctgatcc aggccttcga cgcccgcgcc gaacagatcc
     1561 gcgccgcccg catgaagggc tatgagggcg acgcctgccc cgaatgcggc aacttcaccc
     1621 tggtccgcaa cggcacctgc ctgaagtgcg acacctgcgg cgggacgacg ggctgctcgt
     1681 gaccgaggcg ggggactatg ccgcgcacca tagtttggcc ggtgcgcggc ataacctggc
     1741 ccaaacgaag caacagcgtg ccgcagtcga ttttgaggga ccgttctttc ctctcttggg
     1801 tccctctgtg aaggggccgg ctctcatccg ggagagtcgg cctcaagcct tcgatcgtca
     1861 gtcgccacaa ggtgtgacgt cgcatgccga agccatcacc acatccacag cttttaaaga
     1921 ctttgcgctc gttgccggcg accggcgaag gtggcttcga agggtttcta cgtgacgccg
     1981 tagcggcgat cgtccgccgc catcttagcc tcgtcaaatc ggggccccag ggtggcatcg
     2041 ataacggaac cccgccggag gacggccagt cctcaatcgg ggtcgaggcc aagcgctacg
     2101 gcgccaaaaa ctcccttccg ttggatcagc tcaaagccaa actaaccgat gca
//
LOCUS       DATIKR010000360         2120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_90447, whole genome shotgun sequence.
ACCESSION   DATIKR010000360 DATIKR010000000
VERSION     DATIKR010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90447"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VLL76_05740"
     CDS             <1..576
                     /locus_tag="VLL76_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV29036.1"
                     /translation="EAILDAAQEAFLESGYANTSMDTVASRAGVSKATIYAHFKGKDE
                     LFGAIILRKCETHIGMGAIPDIETLDARSAMTAMGSHLMRLLLLPEALGVYRIVVAEA
                     LRQPDLVRAYTEAGPVRGKTNMVKVLTGLVERGELVIDDCWRAADLFIGMLRGECYNR
                     ALLGMPPVEGLTVEASIEAAVEVFMRAYGAQ"
     gene            complement(646..1140)
                     /locus_tag="VLL76_05745"
     CDS             complement(646..1140)
                     /locus_tag="VLL76_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HSV29037.1"
                     /translation="MSSANFTEGDYVVYPTHGVGKVVAVENQEVGGMKLQLFVITFDR
                     DRMTLRVPVAKAAKSGLRKLSSRTVMDTALSTLKGRAKVKRTMWSRRAQEYEAKINSG
                     DPVSIAEVVRDLHRNANQPDQSYSERQIYEAALERLAAELAAVESIDAEAATQKLSEL
                     LEAA"
     gene            complement(1407..1739)
                     /gene="fdxA"
                     /locus_tag="VLL76_05750"
     CDS             complement(1407..1739)
                     /gene="fdxA"
                     /locus_tag="VLL76_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012812302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HSV29038.1"
                     /translation="MAYVVIENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCG
                     VCEPECPAEAIVPDSDPKAGAWAEVNRDYSGQWPNITRKGEQPADAKEWDGKPGKREL
                     LSPNPAKR"
     gene            complement(1760..>2120)
                     /locus_tag="VLL76_05755"
     CDS             complement(1760..>2120)
                     /locus_tag="VLL76_05755"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HSV29039.1"
                     /translation="TLDGHMDEAERDRILAIVKGRFGLSDHDAEALLAEAQQEVARSV
                     QLLGFTKAIKDNFAEAERVRMVEMLWEVAYADGHLHDYEANLVRRVAGLLFVSDQESG
                     AARKRALARLGLGDGLA"
BASE COUNT          349 a          710 c          676 g          385 t
ORIGIN      
        1 gaagccatcc tcgacgccgc ccaggaggcg ttcctcgagt ccggttacgc caacaccagc
       61 atggataccg tcgccagccg cgccggcgtg tccaaggcga ccatctacgc ccatttcaag
      121 ggcaaggacg agctgttcgg cgccatcatc ctgcgcaaat gcgaaaccca tatcgggatg
      181 ggcgccatcc cggacatcga gacgttggac gcccggtcgg cgatgaccgc catgggcagc
      241 cacctgatgc gcctcttgct gctgcccgaa gccttggggg tctaccgcat cgtggtggcc
      301 gaggcgctgc gccagccgga cctcgtgcgt gcctacaccg aggcggggcc ggtgcgcggc
      361 aagaccaaca tggtcaaggt gctgaccggc ctggtcgaac gcggcgaact ggtcatcgac
      421 gattgctggc gcgccgccga cctgttcatc ggcatgctgc gcggcgaatg ctacaaccgc
      481 gccctgctgg gcatgccgcc ggtcgagggg ctgacggtcg aggcctcgat cgaggcggcg
      541 gtcgaggtgt tcatgcgggc ctacggggcc cagtaaggga agtccggctg ccgcaaaccg
      601 cttttcacgg cagccatccc cgctttcgcc cctccaaggc aggaatcagg cggcttccag
      661 caactcggac agcttctggg tggcggcctc ggcgtcgatg ctttcgacgg cggccaactc
      721 ggcggccaga cgctccagcg ccgcttcata gatctggcgc tcggaatagg actggtcggg
      781 ctggttggcg ttgcggtgca ggtcgcgcac gacctccgcg atcgacaccg ggtcgccgga
      841 attgatcttg gcttcgtatt cctgggcgcg gcggctccac atggtgcgct tgaccttggc
      901 gcggcccttc agcgtcgaca gcgcggtgtc catcaccgtg cgcgacgaca gcttgcgcag
      961 acccgacttg gcggccttgg ccaccggcac ccgcagggtc atgcggtcgc gatcgaaggt
     1021 gatgacgaac agctgcagct tcatgccgcc gacttcctgg ttctcgacgg cgacgacctt
     1081 gcccacgccg tgggtggggt aaacgacgta atcgccttcg gtgaaattcg cgctcgacat
     1141 ctggtcaaat tccctggtaa gtccctgccc gccgcaacgg ctcgccgaac cccgaaaaaa
     1201 taacgggggt accggcctcg tccttgacgg gcggggtttt tcgcttcggt tgtcactggt
     1261 aggcggccac gccgccttcg gcctaacgcc aaaaaggcat tccgtcgggc acagtacgac
     1321 ggacttgccc ttataccatg gcctccccgt ttagaacagg ggaaaaagcc cggctagcct
     1381 ttggatgggt tgccgggccg gattccttag cgtttggcag ggttgggcga cagcagctcg
     1441 cgcttgcccg gcttgccgtc ccattccttg gcgtcggccg gctgttcgcc cttgcgggtg
     1501 atgttgggcc actggccgga atagtcgcgg ttgacctcgg cccatgcgcc ggccttgggg
     1561 tcggaatcgg gcacgatcgc ctcggccggg cattccggct cgcacacgcc gcaatcgatg
     1621 cactcgtcgg gattgatcac caggaagttc tcgccctcgt agaagcaatc caccgggcag
     1681 acctcgacgc aatcctggta cttgcacttg atgcagttct cgataaccac gtaagccatg
     1741 atcgactcca attgaccgtt caggcgagcc cgtcgcccag tcccaaccgc gccagcgcgc
     1801 gtttgcgcgc cgcgccggat tcctgatccg acacgaacaa cagcccggcg acgcgccgga
     1861 ccaggttcgc ctcgtaatcg tggaggtggc cgtcggcata ggcgacctcc cacagcattt
     1921 cgaccatccg cacccgttcc gcttccgcga aattgtcctt gatggccttg gtgaagccca
     1981 agagctggac cgaccgcgcg acctcctgct gggcctcggc cagcaatgcc tcggcatcat
     2041 gatcggacag gccgaagcgg cccttgacga tggccaggat gcggtcgcgc tcggcctcgt
     2101 ccatgtggcc gtccagggtg
//
LOCUS       DATIKR010000361         1731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175063, whole genome shotgun sequence.
ACCESSION   DATIKR010000361 DATIKR010000000
VERSION     DATIKR010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175063"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /gene="rfbF"
                     /locus_tag="VLL76_05760"
     CDS             complement(<1..687)
                     /gene="rfbF"
                     /locus_tag="VLL76_05760"
                     /EC_number="2.7.7.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006219020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047343 - glucose-1-phosphate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="HSV29040.1"
                     /translation="MKAVILAGGLGTRISEETVVRPKPMVEIGGKPIIWHIMKIYSAH
                     GINDFVVCLGYKGYMIKEYFANYFLHMADVTIDLGKNSLEVHQNAAEPWRVTLVDTGE
                     NTLTGGRLRRVRDYIGDDDFCFTYGDGVSDVPVGRLIEFHRKHGRKATVTAVQPAGRF
                     GVLEMDGDSVHAFDEKPHGDGNWINGGFFVLNPDVIDLIADDATIWERGPLEGLAARG
                     ELKAYRHDGFW"
     gene            862..>1731
                     /locus_tag="VLL76_05765"
     CDS             862..>1731
                     /locus_tag="VLL76_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29041.1"
                     /translation="MAGGRATDWLSRAAWFAGLWALAHLLAVALTYQVYPGHLDHNES
                     SLVALTRLMIDGHTVYGGFDSPDRVSHAHGPMTFLWHALPQLLFGGGTGAGRAGATAA
                     TLLVPLVMAATALARGTVPALLALSLGSAGILLHLNLSIVVRPDGPITLLVACAVLLA
                     ARSGKGLVASLLMGLCMGAVVAFKINAGLYLVPVVLYHVAADPIRRLAVIGAVSAAVA
                     ALPFAFDAFPPAEYLSMLAGVAGKENTWRGFTALWWKFALYLTIPPAIWLAGGRAAWA
                     ATDRPTKAYLAAYL"
BASE COUNT          235 a          593 c          588 g          315 t
ORIGIN      
        1 ccagaagccg tcgtggcgat aggccttgag ttcgccgcgc gccgccaggc cttccagcgg
       61 gccgcgctcc cagatggtgg catcgtcggc gatcaggtcg atcacgtcgg ggttcagcac
      121 gaagaagccg ccgttgatcc agttgccgtc gccgtggggc ttctcgtcga aggcgtggac
      181 gctgtcgccg tccatctcca gcacgccgaa gcggccggcc ggctgcaccg ccgtcaccgt
      241 cgccttgcgg ccgtgcttgc gatggaactc gatcagcctg cctaccggca cgtccgacac
      301 gccgtcgcca taggtgaagc agaaatcgtc gtcgccgatg tagtcgcgca cccggcgcag
      361 gcggccgccg gtcagggtgt tttcgccggt atcgaccagg gtgacgcgcc acggctcggc
      421 ggcgttctgg tgcacctcca ggctgttctt gcccaggtcg atggtgacgt cggccatgtg
      481 caggaagtag ttcgcgaaat actccttgat catgtagccc ttgtagccca ggcagacgac
      541 gaagtcgttg atgccgtggg ccgaatagat cttcatgatg tgccaaatga tgggcttgcc
      601 gccgatctcg accatgggct tcgggcggac gacggtttcc tcgctgatgc gcgtgcccag
      661 accgccggca agaattaccg ctttcatgtg tcccctgtcc cgcaacgcca cttggaacgg
      721 ccgcccggtt ggttccggcg cgaaccgctg accttttagc atgcctgccc ggggaagatg
      781 aaaggtttcg tggccggccg caattgcgcc ggccggggaa atcctctaat cacggggtca
      841 ccggacacca aggggggcga catggcaggg gggcgagcga cggactggct ttcgcgcgcg
      901 gcgtggttcg ccgggctgtg ggcgttggcc catctgctgg cggtggcgct gacataccag
      961 gtctatcccg gccatctcga ccacaacgaa tcgagcctgg tggcgctgac ccgcctgatg
     1021 atcgacggcc acaccgtcta tggcggcttc gattcgcccg accgggtgtc gcatgcccac
     1081 ggccccatga ccttcctgtg gcatgcattg ccgcaattgc tgttcggcgg cggcaccggt
     1141 gccggccggg ccggcgccac ggccgcgacg ctgctggtgc cgctggtgat ggcggcgacg
     1201 gcgctggcgc gcggcaccgt ccccgccctg ctggcgctga gcctgggaag cgccggcatc
     1261 ctgctgcacc tcaacctcag catcgtcgtg cgccccgacg gcccgatcac gctgctggtc
     1321 gcctgcgccg tgctgctggc cgcccgcagc ggcaagggcc tggtcgccag cctgctgatg
     1381 ggcctgtgca tgggcgcggt ggtggcgttc aagatcaacg ccggccttta tctggtgccg
     1441 gtggtgctct accacgtggc cgccgatccg atccgccgcc ttgccgtcat cggcgcggtc
     1501 tcggcggcgg tggcggcgct gcccttcgcc ttcgacgcct ttccgccggc cgagtacctg
     1561 tccatgctgg cgggtgtggc cggcaaggag aacacttggc gcggcttcac ggccctgtgg
     1621 tggaagttcg ccctctacct gaccataccg ccggccatct ggctggcggg cggccgcgcc
     1681 gcctgggccg cgaccgaccg tccgaccaag gcctacctgg ccgcctatct g
//
LOCUS       DATIKR010000362         3063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_150963, whole genome shotgun sequence.
ACCESSION   DATIKR010000362 DATIKR010000000
VERSION     DATIKR010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150963"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1349)
                     /locus_tag="VLL76_05770"
     CDS             complement(<1..1349)
                     /locus_tag="VLL76_05770"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HSV29042.1"
                     /translation="MSKLGIPGGTTMNAELLAWVDEMVRLCKPDSIHICDGSQAEYDA
                     LCQLMVDGGTMVKLNEAKRPNSYLCRSDPRDVARVEDRTFICSAHKSEAGPTNNWMDP
                     AQMKETMGKLYDGCMKGRTMYVVPFSMGPLGSDIAHIGVEITDSPYVCTNMRIMTRMG
                     QAVLDLIGKDGDFVKCLHSVGQPLAAGEKDVPWPCNPDNIFISHFPEDRMIWSYGSGY
                     GGNALLGKKCFALRIASTMGRDEGWLAEHMLIVGVESPQGEKTYVAAAFPSACGKTNF
                     AMLQPPAGFEGWKIYTVGDDIAWIKPGPDGKFYAINPEAGFFGVAPGTGYHTNANAMA
                     ACAKNTIFTNVALTDDGDVWWEGMTEEKPKHLIDWKGRDWTPDSTEPAAHPNARFTAP
                     VNQCPSVDPDWENPAGVPISAFIFGGRLSKTMPLVYQSFDWVHGVYLAATMGSEATAA
                     "
     gene            complement(1540..2208)
                     /locus_tag="VLL76_05775"
     CDS             complement(1540..2208)
                     /locus_tag="VLL76_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSV29043.1"
                     /translation="MDSLANDQAQSPINNRHALRLVARACRKAALSTIMADGSGAPYA
                     SLVTVAFDHDLSPILLLSGLADHTRNIMAQPMVSLLLDGTDGHPNPQTGPRVTLMGVA
                     ERSDDDRLKRRFLARHPGAAQYAGFGDFGFWRVRPQRAHFVGGFGRAVWFDAPFGLDE
                     ALCAEMIEAEAALLDGVVAAADADGIDLSQPDGALRIPFPTPMDSGAELKAAVAATTG
                     GVKR"
     gene            2253..2840
                     /locus_tag="VLL76_05780"
     CDS             2253..2840
                     /locus_tag="VLL76_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HSV29044.1"
                     /translation="MKSVVGIALAAVLALSVQPALAGDAAKGDIAVKGAWSRATPPQA
                     PAGGAFMTITNSGKQDDKLVAAKAGVSKTVELHTHVNDNGVMRMRQVEAIPVAAGQTV
                     ALQPGGLHVMFIGLNAPLQQGQAIPVTLVFEKAGEVAVSVDVQQVGAMGPAAMMHDPA
                     MHQQHMADPAMQKMHEQHMQDPAMRQMHDKMHGAK"
     gene            complement(2845..>3063)
                     /locus_tag="VLL76_05785"
     CDS             complement(2845..>3063)
                     /locus_tag="VLL76_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017529350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HSV29045.1"
                     /translation="DLRILVRARDIRQAKGLEASGASFVVPETLEGSLQLAGQVLRTL
                     GTPPEDVHGMLDEYRKNEYARIVEVVGK"
BASE COUNT          508 a          991 c         1058 g          506 t
ORIGIN      
        1 gcggcggtgg cttccgaacc catggtggcg gccagataga cgccgtgcac ccagtcgaag
       61 gactggtaca ccagcggcat ggtcttggac aggcggccgc cgaagatgaa ggccgagatc
      121 ggcacgccgg cggggttctc ccaatcggga tcgaccgacg ggcactggtt gaccggggcg
      181 gtgaagcggg cgttggggtg ggccgccggc tcggtcgagt cgggggtcca gtcgcgaccc
      241 ttccagtcga tcaggtgctt gggcttctct tcggtcatgc cctcccacca cacgtcgccg
      301 tcgtcggtca gcgcgacgtt ggtgaagatg gtgttcttgg cacaggccgc catggcgttg
      361 gcgttggtgt gatagccggt gccgggggcg acgccgaaga agccggcctc cgggttgatg
      421 gcgtagaact tgccgtcggg gccgggcttg atccaggcga tgtcgtcgcc gacggtgtag
      481 atcttccagc cctcgaagcc ggccggcggc tgcagcatgg cgaagttggt cttgccgcag
      541 gccgacggga aggcggcggc gacataggtc ttctcaccct gcgggctttc gacgccgacg
      601 atcagcatgt gctcggccag ccagccctcg tcgcggccca tggtcgacgc gatgcgcagc
      661 gcgaagcact tcttgcccaa cagcgcgttg ccgccgtagc ccgaaccgta ggaccagatc
      721 atccggtctt cggggaagtg cgagatgaag atgttgtccg ggttgcacgg ccaggggacg
      781 tccttctcgc cggcggccag cggctggccg accgagtgca ggcacttgac gaagtcgccg
      841 tccttgccga tcaggtccag cacggcctgg cccatgcggg tcatgatgcg catgttggtg
      901 cagacatagg ggctgtcggt gatctcgacg ccgatatggg cgatgtcgga ccccagcggg
      961 cccatggaga acggcaccac gtacatggtg cggcccttca tgcagccgtc gtacagcttg
     1021 cccatggtct ccttcatctg ggccgggtcc atccagttgt tggtcggacc ggcctcggac
     1081 ttgtgggccg agcagatgaa ggtgcggtcc tcgacgcgcg ccacgtcgcg cgggtcggaa
     1141 cgacacaaat agctgttggg ccgcttggcc tcgttcagct tgaccatggt gccgccgtcc
     1201 accatcagct ggcacagggc atcgtattcc gcctgggaac cgtcgcagat gtggatgctg
     1261 tccggcttgc acagccgcac catctcgtcg acccacgcca agagctcggc gttcatggtg
     1321 gttccgcccg gaatacccaa cttgctcatt ttgtcgttct ccgtcccatt gtggtggcag
     1381 catccccctg ggagctcgcc tgagacagga acgacgagcc catgccgaga atacgacccc
     1441 gatcggcggg cgcgaaacgc cgccgtgaag aggcggggag gatagcgccc gaccgcccgg
     1501 acggcaatgc cctagctgtg taatgtctac ccaaacaagt tagcgtttga cgccgccagt
     1561 ggtggcggcc actgccgctt tcagctcggc cccactatcc atgggggtag gaaagggtat
     1621 gcgcagcgcc ccatccggct gggacaggtc gattccgtcg gcgtcggcgg ccgcgactac
     1681 cccgtccagc aaggcggctt ccgcttcgat catttcggcg cagagggcct cgtcgaggcc
     1741 gaacggggcg tcgaaccaca cggcgcggcc gaagccgccg acgaaatggg cgcgctgggg
     1801 ccgcacccgc cagaagccga aatcgccgaa gccggcatat tgggcggcgc cgggatggcg
     1861 ggcgaggaaa cggcgcttca ggcggtcgtc gtcgctgcgc tcggcgacac ccatcagggt
     1921 gacgcgcggg ccggtctggg ggttgggatg gccgtcggtg ccgtccagca gcagcgaaac
     1981 catgggttgg gccatgatgt tgcgggtgtg gtcggccagc cccgacagca gcaggatcgg
     2041 cgacaggtcg tgatcgaacg ccaccgtcac caacgacgca tagggcgcgc ccgagccgtc
     2101 cgccatgatt gtggacaggg ccgccttgcg gcaggcccgc gccaccaacc gcagggcgtg
     2161 acgattgttg atgggcgatt gagcttgatc atttgccagg gagtccattt tggcccttaa
     2221 tcatggtctc tgaatcagga ggatcatcgc agatgaagtc cgtcgtggga attgccctgg
     2281 ccgccgtatt ggccctgtcc gttcagcctg ccctggccgg cgacgccgcc aagggagaca
     2341 tcgccgtcaa gggcgcttgg tcccgtgcca ccccgcccca ggccccggcc ggcggcgcct
     2401 tcatgaccat caccaattcc ggcaagcagg acgacaagct ggtcgccgcc aaggcgggcg
     2461 tgtccaagac ggtcgagctg cacacccacg tcaacgacaa cggcgtcatg cgcatgcgcc
     2521 aggtcgaggc gatcccggtg gccgccggcc agaccgtggc gctgcagccc ggcggcctgc
     2581 acgtgatgtt catcggcctg aacgcgccgc tgcagcaggg ccaggcgatc cccgtcaccc
     2641 tggtgttcga aaaggccggc gaggtggcgg tcagcgtcga cgtgcagcag gtcggcgcca
     2701 tgggccccgc cgccatgatg cacgacccgg ccatgcatca gcagcacatg gccgacccgg
     2761 cgatgcagaa gatgcacgag cagcacatgc aggacccggc catgcggcag atgcacgaca
     2821 agatgcacgg ggcgaagtag gcccctactt ccccaccacc tcgacgatgc gcgcgtattc
     2881 gttcttgcga tattcgtcga gcatgccgtg gacgtcctcg ggcggggtgc ccagggtgcg
     2941 caggacctgg ccggccagtt gcaggctgcc ttccagggtc tcgggcacca cgaagctggc
     3001 gcccgaggct tccagcccct tggcctggcg gatgtcgcgg gcgcgcacca ggatgcgcaa
     3061 atc
//
LOCUS       DATIKR010000363         1969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_186541, whole genome shotgun sequence.
ACCESSION   DATIKR010000363 DATIKR010000000
VERSION     DATIKR010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186541"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VLL76_05790"
     CDS             complement(<1..293)
                     /locus_tag="VLL76_05790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29046.1"
                     /translation="MSTERKLFTAELQRMRAQAGKGAAPAASLGGPSNDEVLKSLDEI
                     KGQLRALEHLVKGEEPPPPSAQVATLDEMVGQKQAEVQMLKTELRALAVCIEQT"
     gene            complement(290..718)
                     /locus_tag="VLL76_05795"
     CDS             complement(290..718)
                     /locus_tag="VLL76_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HSV29047.1"
                     /translation="MTWNESYSVGNAVLDSDHHILMNLLNQLHDALDTGQSRDVVGSV
                     VNVLTEYVEHHFQREEAILAEVGYPTRDDHGAQHRKLEARFRDIRDRWQAGERNALGD
                     EVLDFLQKWLTEHILVTDKAYKPWLESSEAGNAGEGAKHQ"
     gene            887..1885
                     /locus_tag="VLL76_05800"
     CDS             887..1885
                     /locus_tag="VLL76_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HSV29048.1"
                     /translation="MRRLRIATFNLESLDDRPQGGGIDFADRVAVLRPQLQRLRADIL
                     CIQEVNAHAATRRGMRELTALDKLVEGTEYEKFHRVVSMSRGGVRPADRHNLVILSRF
                     TVLESRQVWHDLVPAPAYQPVTADPRPPGPSPVEWDRPVLYAVVEGPNGSRLHVVNVH
                     LRAPRAAWLPGQKERHGRWQSVGGWAEGFFLASVKAAGQALEARLLVDSIFDAEPAAL
                     VAVCGDFNSSDREAPVRTIRGDEEDTGNGHLAARMLVPLERTLAESQRFSVIHHGRRV
                     MLDHILVSRPLLGWYLQAEVHNEALGDELVSPATIWGSPETYHAPMVADFAPPRSG"
BASE COUNT          297 a          672 c          653 g          347 t
ORIGIN      
        1 gtctgctcga tgcagacggc gagcgcgcgc aactcggtct tgagcatctg cacctcggcc
       61 tgcttctggc cgaccatctc gtccagcgtc gccacctggg ccgacggcgg cggcggttcc
      121 tcgcccttga ccaggtgttc cagcgcgcgc aactggccct tgatctcgtc cagcgacttc
      181 aggacctcgt cgttggacgg gccgcccaat gacgcggccg gcgcggcacc cttgccggcc
      241 tgggcccgca tgcgctggag ttcggccgtg aacagcttgc gttcggtgct cattgatgtt
      301 tcgcgccttc ccccgcgttg cccgcttcgg aactttccag ccagggctta taggctttgt
      361 cggtaaccaa aatatgctcg gtcaaccatt tctggagaaa atccaggacc tcgtcgccca
      421 gggcgttgcg ctcgccggcc tgccagcggt cgcggatgtc gcggaaacgg gcctccagct
      481 tgcggtgctg cgccccgtgg tcgtcccggg tgggatagcc gacctcggcc aggatggctt
      541 cctcgcgctg gaaatgatgc tcgacgtatt cggtcagcac gttgaccacg ctgcccacga
      601 cgtcgcggct ctggccggtg tcgagggcgt cgtgcaactg gttgagcagg ttcatgagga
      661 tgtggtggtc ggaatcgagc acggcgttgc ccacgctgta cgactcgttc cacgtcatca
      721 aggccatctt gtcgccctct ccatcccgtt tggaatcaat acacctttcc cgatgccggc
      781 gacaagcagg gccgggttaa tgaaacacgc atttggtgat aagctgacgg gacgggggcg
      841 catccgcacc cggcgtgccc atccttagca agggaaacgg catacggtga gacggctgcg
      901 catcgccacc ttcaacctgg aatccctcga cgaccggccg cagggcggag gcatcgactt
      961 cgccgaccgg gtcgcggtgc tgcgcccgca attgcagcgg ctgcgcgccg acatcctgtg
     1021 catccaggag gtcaacgccc atgccgccac ccgccggggc atgcgcgagt tgacggcgct
     1081 ggacaagctg gtggaaggca ccgaatacga aaagttccac cgcgtggtgt cgatgagccg
     1141 gggtggcgtg cgcccggccg accgccacaa cctggtcatc ctgtcgcgct tcaccgtgct
     1201 ggaaagccgc caggtctggc acgatctggt gccggcgccg gcctatcagc cggtcaccgc
     1261 cgatccccgt ccgcccggcc cgtcgccggt ggaatgggac cgcccggtgc tttatgcggt
     1321 cgtcgagggg ccgaacggca gccgtctgca cgtggtcaac gtccacctgc gggcgccgcg
     1381 cgccgcctgg ctgcccggcc agaaggagcg ccacggccgc tggcagagcg tcggcggctg
     1441 ggccgagggc ttcttcctgg cgtcggtcaa ggccgccggc caggcgctgg aggcgcggct
     1501 cttggtcgat tccatcttcg acgccgaacc cgccgccctg gtggcggtgt gcggcgactt
     1561 caattccagc gaccgcgagg cgccggtacg caccatccgg ggcgacgagg aggacaccgg
     1621 caacggccac ctggcggccc gcatgctggt gccgctggaa cgcacgttgg cggagagtca
     1681 gcgcttttcg gtgatccacc acggccggcg ggtgatgctc gaccacatcc tggtttcgcg
     1741 gccgctgttg ggctggtacc tgcaggccga ggtccacaac gaggccctgg gcgacgaact
     1801 ggtgtctccc gcgaccatct gggggtcgcc cgaaacctac cacgccccca tggtcgccga
     1861 cttcgcgccg ccccgctcgg gctagcaaac taccgtatcg tgcggttcca ctgggaatca
     1921 gaacccccat tccacaggcg tgcgcgcgat gtccatggtg atggggttg
//
LOCUS       DATIKR010000364         2057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_126515, whole genome shotgun sequence.
ACCESSION   DATIKR010000364 DATIKR010000000
VERSION     DATIKR010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126515"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1789
                     /gene="dnaK"
                     /locus_tag="VLL76_05805"
     CDS             <1..1789
                     /gene="dnaK"
                     /locus_tag="VLL76_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HSV29049.1"
                     /translation="NGERLVGQPAKRQAVTNPANTLFAIKRLIGRRFEDPITKKDMNL
                     VPYHIVNGDNGDAWVEAGGSKHSPSQVSAYILMKMKETAESYLGEKVTQAVITVPAYF
                     NDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGMEKKGAGTIVVYDLGGGTFDVSVL
                     EIGDGVFEVKSTNGDTFLGGEDFDARIIDYLADEFKKEQGIDLRSDRLALQRLKEAAE
                     KAKIELSSAMQTEVNLPFITADASGPKHLNIKLTRAKLEALVEDLVARTVEPCKAALK
                     DAGIKASEIDEVILVGGMTRMPKIQEVVKEFFGREPHKGVNPDEVVAIGAAIQGGVLK
                     GEVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTRKSQVFSTAEDNQTAVTIRVF
                     QGEREMAADNKMLGQFDLMGIPPAPRGVPQVEVTFDIDANGIVNVSAKDKATNKEQQI
                     RIQASGGLSDADIEKMVKEAEAHAAEDRKRKDAVEARNHADSLAHTTEKNLKEFGDKV
                     PADLKGEIERDLQALKDVMDSGDADTIKAKTDILMQSSMKLGEAMYKAQEAAGGAGAE
                     AGPGAGAGGSDDTVVDADFEEVDGDKKSK"
     gene            1885..>2057
                     /locus_tag="VLL76_05810"
     CDS             1885..>2057
                     /locus_tag="VLL76_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004970338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSV29050.1"
                     /translation="MSKRDYYDVLGVSRTATADEMKKAYRKLAMLYHPDRNPDDESAS
                     EKFKELNEAYDVL"
BASE COUNT          429 a          695 c          670 g          263 t
ORIGIN      
        1 caacggcgag cgtctggtcg gccagccggc caagcgccag gcggtgacca acccggccaa
       61 caccctgttc gccatcaagc gcctgatcgg ccgccgcttc gaggatccga tcaccaagaa
      121 ggacatgaac ctggtgccgt atcacatcgt gaacggcgac aacggcgacg cctgggtcga
      181 ggccggcggc tcgaagcatt cccccagcca ggtgtcggcc tacatcctga tgaagatgaa
      241 ggagacggcc gagtcgtatc tcggtgaaaa ggtgacccag gcggtcatca ccgttcccgc
      301 ctacttcaac gacgcccagc gccaggcgac caaggacgcc ggccgcatcg ccggcctgga
      361 agtgctgcgc atcatcaacg agccgaccgc ggccgccctg gcctatggca tggaaaagaa
      421 gggcgccggc accatcgtgg tctatgacct gggcggcggc accttcgacg tgtcggtgct
      481 ggagatcggc gacggcgtgt tcgaggtgaa gtccaccaac ggcgacacct tcctgggcgg
      541 cgaggacttc gacgcccgca tcatcgacta cctcgccgac gagttcaaaa aggagcaggg
      601 catcgacctg cgcagcgacc gcctggccct gcagcgcctg aaggaagccg ccgagaaggc
      661 caagatcgag ctgtcgtcgg cgatgcagac cgaggtcaac ctgccgttca tcaccgccga
      721 cgcctcgggc cccaagcacc tcaacatcaa gctgacccgc gccaagctgg aagccctggt
      781 cgaggatctg gtcgcccgca ccgtcgagcc gtgcaaggcg gcgctcaagg acgccggcat
      841 caaggccagc gagatcgacg aggtcatcct ggtcggcggc atgacccgca tgcccaagat
      901 ccaggaagtg gtgaaggaat tcttcggccg cgagccccac aagggcgtca accccgacga
      961 ggtggtcgcc atcggcgccg ccatccaggg cggcgtgctg aagggcgagg tcaaggacgt
     1021 cctgctgctc gacgtcaccc cgctgagctt gggcatcgag accctgggcg gcgtgttcac
     1081 ccgcctgatc gaccgcaaca ccaccatccc gacccgcaag tcgcaggtct tctcgaccgc
     1141 cgaggacaac cagaccgcgg tgaccatccg cgtgttccag ggcgagcgcg agatggcggc
     1201 cgacaacaag atgctgggcc agttcgacct gatgggcatc ccgccggcgc cgcgcggcgt
     1261 gccgcaggtc gaggtcacct tcgacatcga cgccaacggc atcgtcaacg tgtcggccaa
     1321 ggacaaggcg accaacaagg aacagcagat ccgcatccag gcctcgggcg gcctgtccga
     1381 cgccgacatc gagaagatgg tcaaggaagc cgaggcgcac gccgccgagg accgcaagcg
     1441 caaggacgcg gtggaagccc gcaaccacgc cgactcgctg gcccacacca ccgagaagaa
     1501 cctcaaggag ttcggcgaca aggtgccggc cgacctgaag ggtgagatcg agcgtgacct
     1561 gcaggcgctg aaggacgtga tggacagcgg cgacgccgac accatcaagg ccaagaccga
     1621 catcctgatg caatcgtcca tgaagctggg cgaggccatg tacaaggcgc aggaagccgc
     1681 cggtggcgcc ggggccgagg ccggtccggg tgccggtgcc ggcgggtccg acgacaccgt
     1741 ggtcgacgcc gacttcgagg aagtcgacgg cgacaagaag tccaagtgag gctcgcgccc
     1801 gcttgatccg acctgccgcc ccgggggaac gacccttccc cggggcggtg gcctgttcag
     1861 cccgatcgta ccgagccctg acgcatgagc aagcgcgact attacgacgt tctgggggtg
     1921 tcccgcaccg ccaccgccga cgagatgaag aaggcctacc gcaagctggc catgctgtac
     1981 catccggacc gcaacccgga cgacgagtcg gcgtcggaaa agttcaagga gctcaacgag
     2041 gcctacgacg tcctcaa
//
LOCUS       DATIKR010000365         1952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_90484, whole genome shotgun sequence.
ACCESSION   DATIKR010000365 DATIKR010000000
VERSION     DATIKR010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90484"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="VLL76_05815"
     CDS             complement(<1..934)
                     /locus_tag="VLL76_05815"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV29051.1"
                     /translation="MRGRQTINIGEAFAQAMAAYEAGRASEARRLAKQILDARPDFGG
                     AHYLSGLLAIDQGMGKRAAEHLAKAIAITPNQPVLHLAMGRALEMAGETNGALLHYRM
                     VLTHDADHAEANARLGELLGRAGKLDEALGHARRAVAANPSHAEAWNTLGALLQRQGQ
                     PEQAAEALRHALDLRPDWPVALNNFGVALKDLGRLDEAATILAGAVELKPGSAGYRAN
                     LASVLRLQGRLDDARRQAERATRQEPRNPDGWVELGLVRQAQDHVDGAAAAFERAVAV
                     GPGRVHAVYCLAEARRLLGQGERAQPLYRRCLDLD"
     gene            1018..1566
                     /locus_tag="VLL76_05820"
     CDS             1018..1566
                     /locus_tag="VLL76_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HSV29052.1"
                     /translation="MDAPLEIRFHNLDPSDALEAAIRERVEKLDKLYPRLTRCLVSVE
                     APHRQHRKGNIWEVHIDLWVPGGHLAVTQQPHRAREKYASPDVYKSLRDAFDSAERQL
                     LDYKRQINGDVKLHEDFFHGQVSEIHDDHGFVLTNTGSQLYFHRNSLMEGSLEDLKPG
                     QNVHYVEAAGDTGPTAAKVWLT"
     gene            complement(1567..>1952)
                     /locus_tag="VLL76_05825"
     CDS             complement(1567..>1952)
                     /locus_tag="VLL76_05825"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HSV29053.1"
                     /translation="NLREACAAMEHGATAAPEEWLAMARRANPAGTARPLLVIHGTAD
                     ATVDCANALDIASQWSALAGAPAAAASCATGGNAKAGPVDLRLLPGFDHFQPVTADCG
                     QADPDKFFQTAPICGAREAWEFFGR"
BASE COUNT          309 a          684 c          682 g          277 t
ORIGIN      
        1 ggtccaggtc caggcagcgg cgatagagcg gctgggcacg ctcgccctgg cccagcaggc
       61 ggcgggcctc ggccagacaa tagacggcgt gcaccctgcc cggccccacc gcgaccgccc
      121 gttcgaaggc ggcggcggca ccatcgacat ggtcctgggc ctggcgcacc agccccagtt
      181 cgacccagcc gtcgggattg cgcggttcct gcctggtggc gcgctcggct tggcggcggg
      241 cgtcgtcgag gcgcccctgc aggcgcagca cggacgccag attggcgcgg tagccggcgc
      301 tgccgggctt cagctcgacg gcaccggcca ggatggtggc ggcctcgtcc agccgcccca
      361 aatccttcag cgccacgccg aaattgttga gcgccaccgg ccaatcagga cgcagatcga
      421 gggcgtggcg cagcgcctcg gcggcctgtt ccggctggcc ctggcgctgc agcagcgcac
      481 ccagggtgtt ccacgcctcg gcatgggagg ggttggcggc gacggcgcgg cgggcatggc
      541 ccagggcctc gtccagcttg ccggcgcgcc ccagcaactc gcccagccgc gcgttggcct
      601 cggcatggtc ggcatcgtgg gtcagcacca tgcggtaatg cagcagcgcg ccgttggtct
      661 cgcccgccat ctccaatgcg cgccccatgg cgaggtgcag caccggctgg ttgggggtga
      721 tggcgatggc cttggccaga tgttcggcgg cgcgcttgcc catgccctgg tcgatggcga
      781 gcaggcccga caggtaatgg gcaccgccga aatcggggcg cgcgtcgagg atctgcttcg
      841 ccagccggcg cgcctcggag gcgcggcccg cctcgtacgc cgccatggcc tgggcgaaag
      901 cctcgccgat attgatggtc tgccgtccac gcatcgccgt ttccccgcga acctgcccca
      961 ggcccgtggc gttacgtata gacgcccgcc acatccgcga caacgagaga agcaacgatg
     1021 gatgcccccc tggaaatccg gttccacaac cttgacccca gcgatgcgtt ggaagccgcc
     1081 atccgcgagc gggtggaaaa gctggacaag ctgtatcccc gcctgacccg ctgcctagtg
     1141 tcggtcgaag cgccgcaccg ccagcaccgc aagggcaaca tctgggaggt gcacatcgac
     1201 ctttgggtgc caggcggcca tctggcggtg actcagcagc cccaccgggc gcgcgagaaa
     1261 tacgccagcc ccgacgtcta caagtcgctg cgcgacgcct tcgattcagc cgagcggcag
     1321 ttgctggact acaagcggca gatcaacggc gacgtcaagc tgcacgagga tttcttccac
     1381 ggccaggtct cggaaatcca cgacgaccac ggcttcgtgc tgaccaacac cggcagccag
     1441 ctttacttcc accgcaactc gctgatggaa ggcagcctgg aggacctcaa acccggacag
     1501 aacgtccatt acgtcgaggc cgccggcgac accggcccca cggcggccaa ggtgtggctg
     1561 acgtgattac cggccgaaga actcccatgc ctcgcgcgcg ccgcagatgg gcgccgtctg
     1621 gaagaatttg tccgggtcgg cctggccgca atcggcggtg accggctgga agtggtcgaa
     1681 accgggcagc aggcgcaaat ccaccgggcc ggccttggcg ttgccgccgg tggcgcacga
     1741 ggccgccgcc gccggagcac cggccaaagc ggaccattgg ctggcgatgt cgagcgcgtt
     1801 ggcgcaatcc accgtggcgt cggcggtgcc gtggatcacc agcaacgggc gggcggtgcc
     1861 ggcgggattg gcgcggcggg ccatcgccag ccattcctcg ggcgcggcgg tggcgccgtg
     1921 ttccatggcg gcgcaggcct cgcgcaggtt gg
//
LOCUS       DATIKR010000366         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_211347, whole genome shotgun sequence.
ACCESSION   DATIKR010000366 DATIKR010000000
VERSION     DATIKR010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211347"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VLL76_05830"
     CDS             <1..439
                     /locus_tag="VLL76_05830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29054.1"
                     /translation="ARTALTSTGGKHNRITEADITNAFDRPGLTPAESDTAKRLLLDK
                     AKTNLAAGGHAATDDSANALFRSIGKTPLGENPLQAAVKRHFYPNRGVPGAAGRATGL
                     NRRLLGGGAGAATGFFSPELADIATNIARSLGDQAVTDVMPAN"
     gene            444..1871
                     /locus_tag="VLL76_05835"
     CDS             444..1871
                     /locus_tag="VLL76_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29055.1"
                     /translation="MNKVQFWTDQEDLFRQAGQMMSLIETGRHIKSAASDALTREMLD
                     AHRPDKDHFLLHVIALGDHEHFGPNRNGDSWPKAACEQYHPTFVSHGHYFREHRNRDK
                     SQAIGQIKAARFNAPMGRIELAVWGHVKKAEDVLEKLKAGKPIGNSMSARVPYDRSSI
                     TGRKAKSPAEYDEYCRYRMNQYIPEHRKFAFVYNDHPTFFDISDVKNPADRIAFALES
                     AMPKAASTGAQGGALLAEAEGVDLPVGERDPRLQAQIEKLAALELYLDAAAAGTAGTD
                     AQALFCKHAAAHAFRGELTEAQLDVFKKMVPGALFRKLAARQVVLPFLSFAAYASGRT
                     LAAAAAHPGIAAAGATLPRLFTKLAAEAAAPELESLCCPGGDHLHGADFSSGDAVDQA
                     MAEATRHFSTEPASVKSRVLENCTAPAAPGEKSAGAIDAEGAQLARAYGHYQLSALEA
                     IQVCHGIESSDARNILVLSHNRSHL"
     gene            1970..>2344
                     /locus_tag="VLL76_05840"
     CDS             1970..>2344
                     /locus_tag="VLL76_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29056.1"
                     /translation="MKRVRAMQSKSAAAQGDKVSDVKDPSVTGTVTPPTHPSESTTNA
                     ALPGGNPKPDNSAAPKSIESKQVAGTLEGATPTTVDGSAKDKAVDSPTAKLASSVSET
                     MARVKALLSKSAAEAPKTESKAE"
BASE COUNT          450 a          865 c          727 g          302 t
ORIGIN      
        1 ggcgaggacc gccctcacca gcaccggcgg caagcacaac cggatcacgg aggccgacat
       61 caccaacgcc ttcgaccgcc cggggctgac gcccgccgaa tcggataccg ccaagcgcct
      121 gctgctggac aaggccaaga ccaatctcgc cgccggcgga catgccgcca ccgacgacag
      181 cgccaacgcg ctcttccgca gcatcggcaa gaccccgctc ggcgagaatc cgctgcaggc
      241 tgcggtcaag cgccactttt acccgaaccg gggtgtgccc ggcgcagcgg gccgcgccac
      301 cggactcaac cgccggctgc tgggcggcgg cgccggggcg gcgaccggct tcttctcccc
      361 ggagctcgcc gacatcgcca cgaacatcgc gcggtcgctg ggcgaccagg ccgtgaccga
      421 cgtgatgccc gcgaactgac cccatgaaca aggttcaatt ctggacggac caggaggatc
      481 tcttccggca ggcggggcag atgatgtccc tcatcgagac cgggcggcac atcaagtccg
      541 ccgcctccga tgccctgacg cgcgagatgc tcgacgccca ccgtccggac aaggaccact
      601 tcctcctgca cgtcatcgcg ctcggcgacc acgagcactt cggccccaac cgcaacggcg
      661 acagctggcc caaggcggcg tgcgagcagt accaccccac cttcgtcagt cacggccact
      721 acttccgcga gcaccgcaac cgcgacaaga gccaggccat cggccagatc aaggccgccc
      781 gcttcaacgc cccgatgggc cgcatcgagc tcgcggtctg gggccacgtc aagaaggcgg
      841 aggatgtgct ggagaagctg aaggcgggca aaccgatcgg caactcgatg agcgcccggg
      901 tgccgtacga tcgctccagc atcaccgggc gcaaggccaa gtcgccggcg gagtacgacg
      961 agtactgcag gtatcggatg aaccaataca tccccgagca ccgcaagttc gccttcgtct
     1021 acaacgacca ccccaccttc ttcgacatct ccgacgtcaa gaacccggcc gaccggatcg
     1081 ccttcgcgct ggagtcggcc atgcccaagg ctgccagcac cggcgcccag ggcggggccc
     1141 tgctggcgga ggccgagggg gtggacctgc cggtcggcga gcgcgacccg cgcctccagg
     1201 cgcagatcga gaagctggcc gcgctcgagt tatacctcga cgccgcggcc gcgggcaccg
     1261 cgggcaccga cgcccaggcc ctcttctgca agcacgccgc cgcccatgcc ttccgcggcg
     1321 agctcaccga ggcgcagctc gacgtattca agaaaatggt accgggcgcg ctgtttcgca
     1381 agctggccgc ccgccaggtg gtgctgccct tcctgtcctt cgccgcctac gcctcggggc
     1441 gcacgctggc ggccgcggcc gcccatcccg gcatcgccgc cgctggcgcc acgctgcccc
     1501 gcctcttcac caagctggcc gccgaagccg cggccccgga gctcgagtcg ctctgctgcc
     1561 cgggcggcga ccacctgcac ggcgccgact tcagctcggg cgacgccgtc gaccaggcca
     1621 tggccgaggc cacgcgccac ttctccaccg aacccgcgag cgtgaagagt cgcgtgctgg
     1681 aaaattgcac cgcccccgcg gcgccgggag aaaaatccgc cggggcgatc gatgccgaag
     1741 gcgcccagct ggcgcgcgcc tacgggcact accagctctc cgccctcgag gcgattcaag
     1801 tgtgtcacgg aatagaatca agtgacgcaa gaaacatcct tgtcctttct cacaacagaa
     1861 gtcatctgta gtctataccg ttgacagatg tttacgtcag cgaaaactca acactgaaga
     1921 aaccaaaatc atgtcctcgc caaaacaggt cagctcttac gaagacgtct tgaagcgggt
     1981 tcgcgcgatg cagtcgaaga gcgcggccgc ccagggcgac aaagtgtccg atgtcaagga
     2041 cccctcggtc actggcaccg tcactccccc gacgcatccg tcggaatcca ccacgaatgc
     2101 cgcgctcccg ggcggcaatc ccaagcccga caactcggcc gcgccgaagt cgatcgagag
     2161 caagcaggtg gcggggacgt tggagggtgc cacgccgacc acggtcgacg gcagcgccaa
     2221 ggacaaggcc gtcgactccc cgaccgcgaa gctcgcgagc tcggtgtcgg agacgatggc
     2281 ccgcgtgaag gcgctgctca gcaagagcgc cgccgaggcg cccaagaccg agtcgaaggc
     2341 tgag
//
LOCUS       DATIKR010000367         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66267, whole genome shotgun sequence.
ACCESSION   DATIKR010000367 DATIKR010000000
VERSION     DATIKR010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66267"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VLL76_05845"
     CDS             <1..382
                     /locus_tag="VLL76_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HSV29057.1"
                     /translation="GFVVEEAGVVAQTRAGKMILDTGDGEKAAFCLPVEGDAVAIMGD
                     NRKLLVFMAEEIPVMTRGRGVMLQKYRDGGAADIKVFTLAEGLSWPLGDRTRTEQDLT
                     PWLGKRASVGRLPPTGFPRSNKFG"
     gene            456..1544
                     /locus_tag="VLL76_05850"
     CDS             456..1544
                     /locus_tag="VLL76_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV29058.1"
                     /translation="MERRSFLKAATVGAAGATLAAPSIAKAAPKVEWRMASSFPKSLD
                     TIYGGGEMIAKRVSELTDGAFQIRVFAGGEIVPPLAVLDAVQAGTVQCGHSASYYYVG
                     KDPTFAFESAMPFGLNARQQNAWLFHGGGMELLREFYKDYNVLNFPAGNTGTQMGGWF
                     RKEIKTAADLQGLKMRIAGIAGNVMAKLGVVPQQLGGGDIYPALEKGTIDATEWVGPY
                     DDEKLGFYKVAKYYYYPAFWEGGTTLSAFANAEAFNALPKQFQQAFATAAMEATLDMQ
                     AKYDVQNGAAIRRLVANGVQLKPFPQDVMLSAQKAAFAMYDEMAASNPKFGKIYGPWR
                     QFRDDIQGWWKVAEFNFDYFSLTNPVKK"
BASE COUNT          326 a          570 c          571 g          287 t
ORIGIN      
        1 cggcttcgtg gtcgaggaag cgggcgtggt ggcccagacc cgcgccggca agatgatcct
       61 ggacaccggc gacggcgaga aggcggcgtt ctgcctgccg gtcgagggcg acgcggtcgc
      121 catcatgggc gacaaccgca agcttctggt gttcatggcc gaggaaatcc cggtgatgac
      181 ccgcggccgt ggcgtcatgc tgcagaaata tcgcgacggc ggcgccgccg acatcaaggt
      241 gttcacgctg gccgagggct tgagctggcc gctgggcgac cgcacccgca cggaacagga
      301 cttgacgccg tggctgggca agcgcgcctc ggtcggacgc ctgccgccca ccggcttccc
      361 ccgcagcaac aaattcggat aattccccgg ctggtcagac cacgcctttc gtgccaccat
      421 cctctcctca aaggcttaag acctggagga aatagatgga aagacgttcg tttctgaagg
      481 ccgcgaccgt gggcgccgcc ggcgccaccc tggccgctcc cagcatcgcc aaggccgcgc
      541 ccaaggtgga atggcgcatg gcgtccagct ttcccaagag cctggacacc atctatggcg
      601 gcggtgagat gatcgccaag cgcgtgtccg agttgacgga cggggcgttt cagatccgcg
      661 tcttcgccgg cggcgagatc gtcccgccgc tcgccgtgct cgacgccgtc caggccggca
      721 cggtgcaatg cggccattcc gccagctatt actacgtcgg caaggaccct accttcgcct
      781 tcgaatcggc gatgcctttc ggcctgaacg cgcgccagca gaacgcctgg ctgttccacg
      841 gcggcggcat ggagctgctg cgcgagttct acaaggacta caacgtgctg aatttcccgg
      901 cgggcaacac cggtacccag atgggtggct ggttccgcaa ggagatcaag acggcggccg
      961 acctgcaggg cctgaagatg cgcatcgccg gcatcgccgg caacgtcatg gccaagctgg
     1021 gcgtggtgcc gcagcaattg ggcggcggcg atatctatcc ggcgctggaa aagggcacca
     1081 tcgacgccac cgagtgggtc ggtccctatg acgacgagaa gctgggcttc tacaaggtcg
     1141 ccaaatacta ctactacccg gcgttctggg agggcggcac gaccctgtcg gctttcgcca
     1201 acgccgaagc cttcaacgcg ctgcccaagc agttccagca ggctttcgcc accgccgcca
     1261 tggaggcgac gctggacatg caggccaagt acgacgtgca gaacggcgcc gccatccgcc
     1321 ggttggtcgc caacggtgtc cagctcaagc cgttcccgca ggacgtcatg ctgtcggccc
     1381 aaaaggccgc cttcgccatg tatgacgaga tggccgccag caaccccaag ttcggcaaga
     1441 tctacggccc gtggcgccag ttccgcgacg atatccaggg ctggtggaag gtggccgagt
     1501 tcaatttcga ctacttctcg ctgaccaacc cggtgaagaa gtagttttgg gcttggccgc
     1561 tcgtgcctga aagatgcttc gctgcgctca gcatgacaaa gcatggtgtc atcctgaggc
     1621 ggagccgaag gatctttcag ccacggcgcc aaccgaccta aaccagatta ctgcccgaag
     1681 gacgggggcg gcgggggagg cgggaacccc tgctcccccg gggcgccgcc atagggcggc
     1741 atctggatgt cgat
//
LOCUS       DATIKR010000368         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_223657, whole genome shotgun sequence.
ACCESSION   DATIKR010000368 DATIKR010000000
VERSION     DATIKR010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223657"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VLL76_05855"
     CDS             complement(<1..342)
                     /locus_tag="VLL76_05855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29059.1"
                     /translation="MTADSTPGAALVDLLALLVRAGRTHGVTYTLTPDDAKPPAVTVG
                     LANSAELNVFVTAVHTLAAAMPAAHADHMALVLGELLDRALARWTDPRAGDDRWYHSR
                     AAHRALGMASGQ"
     gene            complement(357..833)
                     /locus_tag="VLL76_05860"
     CDS             complement(357..833)
                     /locus_tag="VLL76_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV29060.1"
                     /translation="MTAIAKTTTRRPAARGRLADGRPGPIDAHVGARVRLRRTLLGVT
                     QEKLGEMLGLTFQQVQKYERGANRVGASRLFDLSRALDVPIAFFFDDMPDAVSAASPS
                     AVTSGAAPAVAETGLDPMARRESLELVRAYYRITDPAVRRRVLDLARALGAAGDEG"
     gene            complement(856..1152)
                     /locus_tag="VLL76_05865"
     CDS             complement(856..1152)
                     /locus_tag="VLL76_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29061.1"
                     /translation="MRVGRTVRIRVTRGEPDAAGICRARVYHDRRKVEEFETTPAEFT
                     ALCFEIRGRTVPQKVAAAAQAAQEAREEAGRTFHWRLVAAIRLTAPLGPPQPAF"
     gene            complement(1152..1346)
                     /locus_tag="VLL76_05870"
     CDS             complement(1152..1346)
                     /locus_tag="VLL76_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29062.1"
                     /translation="MRRLIHLSEAELADLMREARSELGRTLPLTFGLTGVALIADAAP
                     WAVPMLDQWRGVTVADGGGI"
     gene            complement(1334..>1807)
                     /locus_tag="VLL76_05875"
     CDS             complement(1334..>1807)
                     /locus_tag="VLL76_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29063.1"
                     /translation="AMQLCAENGIRFDVVIPIALSCVNWADGGLPDAFIEHFFDDWLE
                     GSEATDKAVQPLIKCLPAFAELLEREDFDELDAHHVADWMIEKGHLGILAMVSTPVRK
                     YTPEGRSWTESWSNTAHTWLYGETLEDLFVAAGEWAEGKVKRWIAQWGGLTPCAA"
BASE COUNT          263 a          580 c          693 g          271 t
ORIGIN      
        1 ctggcccgag gccatgccca gcgcgcggtg ggcggcccgg ctgtggtacc agcggtcgtc
       61 gccggcgcgc gggtcggtcc agcgcgccag cgcgcggtcg agcaattccc ccagcaccag
      121 ggccatatgg tcggcatggg ccgccggcat ggcggccgcc agggtgtgga cggccgtgac
      181 gaagacgttg agctcggcgc tgttggccag cccgacggtg acggcgggcg gcttggcgtc
      241 atcgggcgtc aacgtgtagg tgacgccgtg ggtgcgcccg gcgcggacca gcagggccag
      301 caggtccacg agggcggcgc cgggggtgga atcggcggtc atggcgcggc cctccctcag
      361 ccttcgtcgc cggcggcgcc gagggcgcgg gcgaggtcga gaacgcggcg gcgcaccgcc
      421 gggtcggtga tgcggtaata ggcgcggacc agttccaggg actcgcgccg ggccatgggg
      481 tcgaggccgg tctcggcgac ggcgggggcg gcgccggagg tcacggcgga cgggctggcg
      541 gcgctgacgg cgtcgggcat gtcgtcgaag aagaacgcga tcgggacgtc cagcgcgcgg
      601 gacaggtcga acaggcggct agcgccgacg cggttggcgc cgcgttcgta tttctggacc
      661 tgctggaagg tcaggcccag catctcgccc agcttttcct gggtgacgcc gagcaaggtg
      721 cggcgcaggc ggacgcgggc gccgacatgg gcgtcgatgg ggccggggcg gccgtcggcc
      781 aggcggccac gggcggcggg acggcgggtg gtggtcttgg cgatcgcggt catgctgatg
      841 tcctttgctt ctgggtcaaa aggccggctg gggcggaccc agcggcgcgg tcaggcggat
      901 ggctgccacc agccgccaat ggaaggtccg gcccgcttcc tcgcgggctt cttgggcggc
      961 ttgcgcggcc gccgcgacct tttggggcac ggtgcggccc cggatctcga aacacagggc
     1021 ggtgaactcg gccggcgtcg tctcgaactc ctcgaccttg cggcggtcgt ggtagacgcg
     1081 cgcccggcag atgccggcgg cgtcgggctc gccccgggtg acgcggatcc ggacggtgcg
     1141 gccgacgcgc atcagatccc cccgccgtcg gcgacggtga cgccgcgcca ttggtcgagc
     1201 atgggcaccg cccagggcgc cgcgtcggcg atcagggcga cgccggtgag gccgaaggtg
     1261 agcggcaggg tgcggccgag ttcggacctg gcctcacgca tcaggtcggc cagctcggcc
     1321 tcggacaggt ggatcaggcg gcgcatggcg tcaggcctcc ccactgggcg atccagcgtt
     1381 tcactttgcc ttcagcccat tcgccagcgg cgacgaacag atcctcgagc gtctcgccgt
     1441 acagccacgt atgggcggtg ttgctccagg attcggtcca gctacgaccc tcgggggtgt
     1501 atttccgaac tggcgtggaa accatcgcga ggatgccgag gtggcccttt tcgatcatcc
     1561 agtcagcgac gtgatgggca tcgagttcgt cgaagtcttc gcgctccaac aactccgcaa
     1621 acgcaggaag gcatttgatc aaaggctgca cagccttgtc cgtcgcctca cttccctcaa
     1681 gccaatcgtc gaagaaatgc tcgatgaacg catcgggcag accgccgtcc gcccagttga
     1741 cgcaggacag tgcaatgggg atgacgacat cgaatcgaat gccgttctcg gcgcacaatt
     1801 gcatggc
//
LOCUS       DATIKR010000369         1655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_29729, whole genome shotgun sequence.
ACCESSION   DATIKR010000369 DATIKR010000000
VERSION     DATIKR010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29729"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1044
                     /locus_tag="VLL76_05880"
     CDS             106..1044
                     /locus_tag="VLL76_05880"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV29064.1"
                     /translation="MIPSISCVIPTRGRPQLVRRAVDSALGQTLPPAEVIVVVDGPDP
                     ATMAVLARIDDPRLVVIESPVSQGPAMARNRGVEAASGEWIALLDDDDYWLPDKLARQ
                     AETARRSRQSHPIVSCRVIARTGRGDFVWPKDLPGNEPLGNYLIERRTPLGRPGYVAT
                     PTLFVRRDMLLAVPFPALDDHEDWGWLLEAAAAFQARVEMVDAPLCVVTVAEHSASRS
                     KRNSWEASLDWAERYRLMLTPRAYSAFLATKVAGKARRQGAWRVAGELLRRMRRHGRP
                     TALHLLLFLATWVLPPRGHLLFQIVSFGDSKERISP"
     gene            1041..>1655
                     /locus_tag="VLL76_05885"
     CDS             1041..>1655
                     /locus_tag="VLL76_05885"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HSV29065.1"
                     /translation="MTGNPDKEYPPIGQAPPPTDLKHVLRIVSRRRWTFAIALLAVIA
                     AAFLAAFGIHPRYAAEATVLLESRKTQVSTQTSVLSDLPADMAAVRSEIEIIRSNQLL
                     ATVVDRLGLANDPEFTAPRWHDRVLAQAVALAPALAPMLGDQSPAHRRQELFERVQDR
                     LIVTNDSRSYSLRIKFVSEDAAKAARIANAFATAYVEAQMQIRGE"
BASE COUNT          224 a          605 c          570 g          256 t
ORIGIN      
        1 ggcggccgcc gggctggcct atggcctgtc gtgtctgctg ttggacgtgg gcggcatcgg
       61 cggccaggcg cgccggctgc tcgcccgcaa ggccccggag gttccatgat cccgagcatt
      121 tcctgcgtca tccccacccg cggccggccg caattggtgc gccgagcggt ggacagcgcg
      181 ctgggccaga cgctgccgcc ggccgaggtg atcgtggtgg tcgatggtcc cgaccccgcc
      241 accatggctg tgctggcgcg gattgacgac cctcgcctgg tggtcatcga aagccccgtc
      301 tcgcaaggcc cggccatggc gcgcaaccgg ggcgtcgagg cggcgtcggg cgagtggatc
      361 gcgctgctgg acgacgacga ttactggctg cccgacaagc tggcccgcca ggccgagacg
      421 gcgaggcgct cgcggcagag ccatcccatc gtgtcgtgcc gggtcatcgc ccgcaccggc
      481 cggggcgact tcgtgtggcc caaggatttg cccggcaacg agccgctggg caattacctg
      541 atcgagcgcc gcacgcccct gggccgcccc ggctatgtcg ccacccccac cctgttcgtc
      601 cgccgcgaca tgctgctggc ggtgccgttc ccggcgctgg acgaccacga ggattggggc
      661 tggctgctgg aggcggccgc cgccttccag gcccgcgtcg agatggtgga cgcccccttg
      721 tgcgtggtga cggtggccga gcattccgcc tcacgctcca agcgcaattc ctgggaggcg
      781 tcgctggatt gggccgagcg ctaccgcctg atgctgaccc cgcgcgccta ttccgccttc
      841 ctcgccacca aggtggcggg caaggcgcgg cggcagggcg cgtggcgggt ggcgggcgag
      901 ctgctgcggc gcatgcggcg gcacggccgg ccgacggcgc tgcacctgct gctgttcctt
      961 gccacctggg tgctgccgcc gcgcggccac ctgctgttcc agatcgtgag ctttggcgat
     1021 tccaaggaaa ggatctcccc atgaccggca atccggacaa agagtatccg cccatcgggc
     1081 aagccccgcc gcccaccgac ctcaagcacg tcctgcgcat cgtctcgcgc cgccgctgga
     1141 cgttcgcaat cgccttgctc gcggtgatcg cggccgcctt cctcgccgcc ttcggcatcc
     1201 atccgcgcta tgccgccgag gcgaccgtcc tgctggaatc gcgcaagacc caggtctcga
     1261 cccagacctc ggtgctgagc gacctgccgg ccgacatggc ggcggtgcgg agcgagatcg
     1321 agatcatccg ctcgaaccag ttgctggcca ccgtggtgga tcggctgggc ctcgccaacg
     1381 acccggaatt cacggcgccg cgctggcatg accgtgtgct ggcccaggcg gtcgcgctgg
     1441 caccggccct ggccccgatg ctgggcgacc agagcccggc ccatcgccgc caggaattgt
     1501 tcgagcgcgt ccaggaccgc ctgatcgtca ccaacgacag ccgctcgtac agcctgcgca
     1561 tcaagttcgt gtccgaggac gcggccaagg ccgcccgcat cgccaacgct ttcgccaccg
     1621 cctatgtcga ggcgcagatg cagatccggg gcgag
//
LOCUS       DATIKR010000370         2511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66273, whole genome shotgun sequence.
ACCESSION   DATIKR010000370 DATIKR010000000
VERSION     DATIKR010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66273"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1100
                     /locus_tag="VLL76_05890"
     CDS             <1..1100
                     /locus_tag="VLL76_05890"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HSV29066.1"
                     /translation="LNNPVVTFNPGTILIKERQINDCIFLLLSGSVESIPLEHSGRSV
                     LSAGAMIGELSGLFSTVATETYRAVGFVKALQIPCTLYGEFVRRNHVFAEIARVLENR
                     EFLQRTWLFGEVVSTKTLTRIAKEMVLASFASGETVETGPETVGLVARGKIGRFLGEH
                     EVEILNPGDFFGEELAIFWTPSMFRLRADCDTDVFLIPATIVADIPSVRWKLFEQSGK
                     RMTALVESEREGRELLRWHEEYRVDILRIDSQHRRLFEQSNAILDAIDGGRGMADVLA
                     QLDTMAEYARYHFGEEEALMGRHAYAELENHRARHAGLMDQLSDLRASLEKAGTVSED
                     DLKAFLQDWLVQHILCEDRKYAAYLNARGVY"
     gene            complement(1231..2442)
                     /locus_tag="VLL76_05895"
     CDS             complement(1231..2442)
                     /locus_tag="VLL76_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03862 family flavoprotein"
                     /protein_id="HSV29067.1"
                     /translation="MSTSIRPAIVIGAGPAGLMAAEALASRGHEVEVFDAMPSPARKF
                     LLAGKGGLNLTHSEPLPAFVARYGARADVMAPLLAEFGPDQLRAWARDLGIETFVGTS
                     GRVFPTDFKAAPLLRAWMRRLKASGVRLHARHRWLGWTPDGALRFATPDGEIAVAAGV
                     TILALGGASWPKLGSDGGWVPLLQERGVAVAPLRSANCGFDIGWSEHLRTRFAGAPLK
                     SVTLSFAGETRKGEMVVTETGIEGGLVYALSAPIRDAIARDGAAVARLDLKPDWSEQR
                     LRDALAKPRGSRSLSSHLERAAAIKGVAAALLREILPPADLADPARLAAAIKALPLRL
                     TAPRPLAEAISTAGGVRFEDVDESLMLRALPGVYVTGEMLDWEAPTGGYLLTACFALG
                     RKAGLAAALSP"
BASE COUNT          409 a          851 c          891 g          360 t
ORIGIN      
        1 tgctcaacaa cccggtggtg acgttcaatc ccggcaccat cctgatcaag gaacgccaga
       61 tcaacgactg catcttcctg ctgctgtcgg gcagcgtgga gagcattccg ctggagcaca
      121 gcggcaggtc cgtgctgtcg gccggcgcca tgatcggcga gttgtcgggc ctgttcagca
      181 cggtggcgac cgagacctat cgcgccgtgg gcttcgtcaa ggcgctgcag atcccgtgca
      241 cgctgtatgg cgagttcgtg cgccgcaacc acgtcttcgc cgagatcgcc cgcgtgctgg
      301 aaaaccgcga attcctgcag cgcacttggc tgttcggcga ggtcgtctcg accaagacgc
      361 tgacccgcat cgccaaggaa atggtgctgg ccagcttcgc ctcgggcgag acggtggaaa
      421 ccggccccga gacggtgggc ctggtagcgc gcggcaagat cggccgcttc ctgggcgagc
      481 acgaagtcga gattctgaat ccgggcgact tcttcggcga ggaactggcg atattctgga
      541 cgcccagcat gttccgcctg cgcgccgatt gcgacaccga cgtcttcctg attcccgcca
      601 ccatcgtcgc ggacatcccg tcggtgcgct ggaagctgtt cgagcaatcg ggcaagcgca
      661 tgaccgccct ggtcgagagc gagcgcgagg gccgcgagct gttgcgctgg cacgaggaat
      721 accgcgtcga tatcctgcgc atcgactcgc agcaccgccg cctgttcgag cagagcaacg
      781 ccatcctgga cgccatcgac ggcggccgcg gcatggccga cgtgctggcc cagctcgaca
      841 ccatggcgga atacgcccgc tatcatttcg gcgaggaaga agccctgatg ggccgccacg
      901 cctatgccga gttggaaaac caccgcgcca ggcatgccgg cctgatggac cagctcagcg
      961 acctgcgtgc cagcctggaa aaggccggca ccgtcagcga ggacgatttg aaggccttcc
     1021 tgcaggattg gctggtccag cacatcctgt gcgaggaccg gaaatacgcg gcgtatttga
     1081 acgcgcgtgg cgtgtattga gggctgggtg caaggagata acgtcacccc ggccaagcgt
     1141 agcgcgagcc ggggtccatg gttggtgcac acgcatggat cccgggtctc gcgatgctcg
     1201 cccgggatga cggtcggtta tgaaaacgct tcagggtgat aacgccgccg ccaaccccgc
     1261 cttccttccc aaggcgaagc acgccgtcag caggtagccg ccggtcgggg cttcccaatc
     1321 cagcatctcg ccggtgacgt acacgccggg cagggcgcgc agcatcaggc tttcgtccac
     1381 atcctcgaac cgcacgccgc cggcggtgct gatggcctcg gccagggggc gcggggcggt
     1441 caggcgcagg ggcagggcct tgatggcggc ggcgaggcga gccgggtcgg ccaggtcggc
     1501 gggcggcagg atttcgcgca gcagggcggc ggcgacgccc ttgatggcgg cggcgcgctc
     1561 caggtggctg gacagcgagc gcgagccgcg cggcttggcc agggcgtcgc gcaggcgctg
     1621 ctcgctccag tcgggcttga ggtcgagacg ggccaccgcc gcgccgtcgc gcgcgatggc
     1681 gtcgcggatc ggggccgaca gggcatagac caggccgccc tcgatgccgg tctcggtcac
     1741 caccatctcg cccttgcggg tctcgcccgc gaaggacagc gtcaccgatt tcagcggtgc
     1801 cccggcgaag cgggtgcgca gatgctcgct ccagccgatg tcgaaaccgc aattggccga
     1861 ccgcagcggg gccaccgcca caccgcgttc ctgcaacagc ggcacccagc cgccgtccga
     1921 gccgagcttg ggccaactgg cgccgcccag ggccaggatt gtgacgccgg ccgcgacggc
     1981 gatctcgcca tccggcgtgg cgaagcgcag ggcgccgtcg ggcgtccagc ccagccagcg
     2041 gtggcgggca tgcaggcgca cccccgacgc cttcagccgc cgcatccagg cgcgcagcag
     2101 cggcgccgcc ttgaaatcgg tggggaagac gcggcccgag gtgccgacga aggtctcgat
     2161 ccccaggtcc cgcgcccagg cgcgcaactg gtcggggccg aactcggcca gcagcggcgc
     2221 catcacgtcg gcgcgggcac cgtagcgggc gacgaaggcg ggcaggggtt cggaatgggt
     2281 gaggttgagg ccgcccttgc cggccagcag gaacttgcgg gcgggcgacg gcatggcgtc
     2341 gaacacctcg acctcatggc cgcgcgacgc cagggcctcg gcggccatca ggccggccgg
     2401 cccggctccg atcacgatgg cggggcggat ggacgtgctc accggtgctg gatagcatcc
     2461 cggcggcctg ccgtcacgcc cccttgacca ccagcaccgg gcaggtggcg g
//
LOCUS       DATIKR010000371         3061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_235391, whole genome shotgun sequence.
ACCESSION   DATIKR010000371 DATIKR010000000
VERSION     DATIKR010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235391"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="VLL76_05900"
     CDS             <1..287
                     /locus_tag="VLL76_05900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29068.1"
                     /translation="EDVIMEWWTATLAVGALGGVAIALRSTGLSFFTLAAFMPLALYT
                     LYNDFERFWILMTLAFMVEGAALLRYSRAPLAADPARAGGAAHAPERAVA"
     gene            complement(329..823)
                     /locus_tag="VLL76_05905"
     CDS             complement(329..823)
                     /locus_tag="VLL76_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV29069.1"
                     /translation="MTQTTAETGKTRRKASRGRTPSGKPNPIDIHVGGRVRLRRTLLG
                     ITQEKLAESLGLTFQQVQKYERGANRVGASRLFDLSRVLDVPVSFFFEEMSEDVQKNS
                     PGLIGNSADPESAVANYKGDPVMKRETLELVRAYYRIKDPDVRKRVCDLANALGEIVG
                     ASRG"
     gene            1003..1755
                     /locus_tag="VLL76_05910"
     CDS             1003..1755
                     /locus_tag="VLL76_05910"
                     /inference="COORDINATES: protein motif:HMM:NF015437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HSV29070.1"
                     /translation="MFGDRDILASFVEELRKFEGVEDLKRVLGEAVERLGIASFAYQV
                     VRAGGIPGRLPYFITTYPAAWVERYTSQNYLQDDPLIDDLPDRRLPFLWSDVQKSKEL
                     TTRQKQMFVEAREYGLLNGLAVPIHGKNGEFATVSFVPGGNESEANATIAIYRHLLHL
                     LALYYHDHAARILLDKAMSSPRQKSLLSPREKEVLQWTARGKSNWEISTVLGISEKSV
                     EFHLDSARRKLQVYNRTHAVVKAIMLGMIRID"
     gene            2036..2227
                     /locus_tag="VLL76_05915"
     CDS             2036..2227
                     /locus_tag="VLL76_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29071.1"
                     /translation="MQLPLDAKEKQRQQAAAALHHALQYLEQDAQEHGFKEIALLIGC
                     AKMALDDELGVRAAGEQVH"
     gene            complement(2297..>3061)
                     /locus_tag="VLL76_05920"
     CDS             complement(2297..>3061)
                     /locus_tag="VLL76_05920"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29072.1"
                     /translation="AIHDTAGGIAGDGGNRNAWSLAVAEAAEQARHTVAAVTDATAQL
                     SASVDEVAGHGVAVAQVVGSAMAGLGLAEDRVRGLAEMAGRIDRIVALIGDIAQRTNM
                     LSLNATIEAQRAGSAGQGFAVVASEVKRLASQTAASAAEIAQQIAAIQAATGDTVTAI
                     GGIGTAIREMDGLASVVQEAVARQTEVTRHIERCVADVTAETRVLSEGVTGFTHSAAQ
                     QCGAAAQVLWAAEDLTAPTRILKDEVDAFLSTVRAA"
BASE COUNT          523 a          933 c         1058 g          547 t
ORIGIN      
        1 gggaggacgt catcatggaa tggtggacgg caacattggc tgtcggcgcc ctgggcggcg
       61 tggccatagc cctgcgcagc accggcctgt cgttctttac gctggcggcg ttcatgccgc
      121 tggcgctgta cacgctgtac aacgatttcg agcggttctg gatcctgatg acgctggcct
      181 tcatggtcga aggcgcggcg ctgctgcgct acagccgtgc gccgctggca gccgatcccg
      241 cgcgggcagg cggtgccgcc cacgcgcccg aaagggccgt ggcttgaccg gcgaacggga
      301 agggccggcg ggcggccctt ccgcgtgctt atcctcggct ggcgccgacg atctcgccca
      361 gggcgttggc caggtcgcaa acgcgcttgc gcacgtccgg atccttgatg cggtaatagg
      421 cgcggaccag ctccagggtt tcgcgcttca tcaccgggtc gcccttgtaa ttggccaccg
      481 cgctttcggg gtcggccgag ttgccgatca ggcccggaga gttcttctgg acgtcctcgg
      541 acatctcttc gaagaagaag ctgaccggca cgtcgagcac gcgcgacagg tcgaacaggc
      601 gcgaggcgcc gacgcggttg gcgccgcgct cgtatttctg cacctgctgg aaagtcaggc
      661 ccagggactc ggccagtttt tcctgggtga tgcccaggag cgtgcggcgc agccggacgc
      721 ggccgccgac atggatgtcg atggggttgg gtttgccgga cggcgtccgg ccacggctgg
      781 ctttacggcg ggtcttgccg gtttcggcgg tagtctgtgt catagggtgg cgccctctat
      841 ttgaaaacgg aagaatcatg gtcgatttgc ggccaaatgg ctaggggcta acggacgtcg
      901 cgggtgacat gcgttggcga tcagcgaaaa ttatagggtt tctaagctct gctgggttat
      961 gatcgcgcgc taatgttgaa aaaccggcgc cagggggtgt gaatgttcgg agaccgggac
     1021 atcctggcct cgtttgtcga agagttgcgc aagttcgaag gcgtcgagga cctcaagcgg
     1081 gtcttgggcg aggccgtcga acgtctgggc atcgcctctt tcgcctatca ggtggtgcgc
     1141 gcgggcggca tcccgggccg ccttccctat ttcatcacca cctatccggc cgcctgggtc
     1201 gagcgctaca ccagccagaa ctaccttcag gacgacccat tgatcgacga tctgccggat
     1261 cgccggctgc cgttcctgtg gtccgacgtt caaaagtcga aggaactgac gacccgccag
     1321 aagcagatgt tcgtcgaggc gcgcgaatac ggcctgttga acgggctggc ggtccccatc
     1381 cacggcaaga acggcgagtt cgcgacggtg tccttcgtgc ccggcggcaa tgaatccgaa
     1441 gccaacgcca ccatcgccat ttatcgccac ctgctgcacc tgctggcgct ctattatcac
     1501 gaccacgccg cgcgcatcct gctggacaag gcgatgagca gcccgcgcca gaaatccctg
     1561 ctcagtccgc gcgagaaaga ggtcctgcaa tggacggcgc gtggaaagtc gaattgggaa
     1621 atctcgaccg tgctcgggat ctcggaaaag agcgtggagt tccacctcga cagcgcgcgc
     1681 cgtaagctcc aggtctacaa tcgaacgcac gcagtagtaa aagcgatcat gctcggaatg
     1741 atccgtattg attgaatcaa gacgttaacc tagggatttc cctagggggg aactcccagg
     1801 agcaggccat cccatgacta tggtctaatc cttcccaggg acgaattcac tgggggttgt
     1861 ggagagcaag ttaactggaa gtaatgatgg gttggcgccc taatgtcatt accctaggca
     1921 acctgcaaaa ttcaccgcac aactcaaagg acagaagggc gcgatgccgc gtagcggcgg
     1981 ccgccaacgc cccagctttg cccggggaat cgggaatgtc agggaggacg ttaggatgca
     2041 actgcccctg gatgccaagg aaaagcagcg tcagcaagct gccgcagcct tgcaccacgc
     2101 gctgcaatac ctggagcagg atgcccaaga gcacggcttc aaggaaatcg cgctgctgat
     2161 cggttgcgcc aagatggcgc tggacgacga actcggcgtc agggccgcgg gagaacaggt
     2221 tcactgatag gttggcgccc gtcggtgata gggccggttc cgcaaggaac cggccctttc
     2281 ctatggtggg tgaccgtcac gccgcgcgca cggtggacag gaaggcatcg acctcgtcct
     2341 tgaggatgcg ggtgggggcg gtcaggtcct cggcggccca cagcacctgg gcggcggcgc
     2401 cgcattgttg ggcggccgag tgggtgaagc cggtgacgcc ctcgctgagg acgcgggttt
     2461 cggcggtgac gtcggcgacg cagcgttcga tgtggcgggt gacctcggtc tggcgcgcca
     2521 ccgcttcctg caccaccgat gccaggccgt ccatttcgcg gatggcggtg ccgatgccgc
     2581 cgatggcggt cacggtgtcg ccggtggcgg cctggatggc ggcgatctgc tgggcgatct
     2641 cggccgccga ggcggcggtc tgcgaggcca accgcttgac ctcgctggcg acgacggcga
     2701 agccctggcc ggccgacccg gcgcgttgcg cctcgatggt ggcgttgagt gacagcatgt
     2761 tggtgcgctg ggcgatgtcg ccgatcaggg cgacgatgcg gtcgatgcgc ccggccatct
     2821 cggccaggcc cctgacccgg tcctcggcca ggcccagtcc ggccatggcg gagccgacca
     2881 cttgcgcgac cgcgacgcca tggccggcga cctcgtcgac cgaggccgac aattgcgcgg
     2941 tggcgtcggt gacggcggcg acggtgtggc gggcctgctc ggccgcttcg gcgaccgcca
     3001 gcgaccaggc gttgcggttg ccgccgtcgc cggcgatccc cccggcggtg tcgtggatgg
     3061 c
//
LOCUS       DATIKR010000372         2996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_42333, whole genome shotgun sequence.
ACCESSION   DATIKR010000372 DATIKR010000000
VERSION     DATIKR010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42333"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VLL76_05925"
     CDS             <1..219
                     /locus_tag="VLL76_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29073.1"
                     /translation="EQQFSIQGASALFRKRRLIEKVAARITKIDKGQAYRLGIGPLEY
                     DAILEHRVSAVDVGRLESIFAKLAGEAG"
     gene            326..889
                     /gene="ahpC"
                     /locus_tag="VLL76_05930"
     CDS             326..889
                     /gene="ahpC"
                     /locus_tag="VLL76_05930"
                     /EC_number="1.11.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016805482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0102039 - NADH-dependent peroxiredoxin
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HSV29074.1"
                     /translation="MSLINSAIKPFKAQAYKNGQFIEVSDADLKGKWSVVFFYPADFT
                     FVCPTELEDLADNYAEFQKLGVEIYSVSTDTHFAHKAWHDSSPAIKKIGYTMVGDPTG
                     TISRNFEVMIEELGLADRGTFVVDPEGKIQIVEITAGGIGRDALELLRKVKAAQYVAS
                     HPGEVCPAKWQEGEKTLAPSLDLVGKI"
     gene            1029..2585
                     /gene="ahpF"
                     /locus_tag="VLL76_05935"
     CDS             1029..2585
                     /gene="ahpF"
                     /locus_tag="VLL76_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016668 - oxidoreductase activity, acting
                     on a sulfur group of donors, NAD(P) as acceptor [Evidence
                     IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009398 - FMN biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HSV29075.1"
                     /translation="MLDEAIKGQLRAYFAKITQPVELVASLDDGAKSQEMDALLRDVA
                     ALSDQITLVQGDNARTPSFAINRVGSDVGVRFAGLPMGHEFNSLILALLQVGGHPPKE
                     SAEVIEQIKALDGDYVFETYFSLSCQNCPDVVQALNLLAALNPCIKHVAIDGALFQDE
                     VTARQVMAVPAVFLNGQPFAQGRMGLEQILARLDTGAAVREAEKIKAKDAFDVLVVGG
                     GPAGAAAAIYAARKGIRTGVVAERFGGQVLDTMAIENFISVPHTEGPRLAASLEAHVK
                     EYGVDVMNLQRAEKLVPGDLIEVHLAGGATVKARSVILSTGARWRTMNVPGEDQYRNK
                     GVAFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLIEFDGKLRADEVLQA
                     KLRSLPNVDVVTSAQTTEVHGDGAKVTGLSYADRNTGQARRLDLDGVFVQIGLVPNTE
                     WLRGTVALSPRGEIEVDAKGQTSIPGVFAAGDATTVPYKQIIIAMGEGAKASLSAFDH
                     LIRKTPPPGR"
     gene            complement(2775..>2996)
                     /locus_tag="VLL76_05940"
     CDS             complement(2775..>2996)
                     /locus_tag="VLL76_05940"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945203.1"
                     /note="Acs; catalyzes the conversion of acetate and CoA to
                     acetyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase"
                     /protein_id="HSV29076.1"
                     /translation="KELVNWVRKEIGPIATPDLIQWAPGLPKTRSGKIMRRILRKIAE
                     NEFGALGDTSTLADPTVVDDLIENRMNRA"
BASE COUNT          533 a         1009 c          973 g          481 t
ORIGIN      
        1 gaacagcaat tctcgatcca gggcgcctcg gccctgtttc gcaagcggcg cctgatcgag
       61 aaggtcgccg cccgcatcac caaaatcgac aagggccagg cctatcgcct gggcatcggc
      121 ccgctggaat acgacgccat cctggagcac agggtgtcgg cggtggatgt cggccggctg
      181 gaaagcatct tcgccaagct ggccggcgaa gcaggctgat taatcgattt cgtcgatttt
      241 tgagtactga acttccaatt tagcaaataa gcgtcgctcg cctaggatcc gtgcatcgaa
      301 acgatgccgc caaggagcga ccccaatgtc cctgatcaat tccgccatca agcccttcaa
      361 ggcccaggcc tacaagaacg gccagttcat cgaggtcagc gatgccgacc tcaagggcaa
      421 gtggtcggtc gtgttcttct atcccgccga cttcaccttc gtctgcccga ccgaactcga
      481 ggatctcgcc gacaattacg ccgagttcca gaagctgggc gtcgagatct acagcgtctc
      541 gaccgacacc cacttcgccc acaaggcgtg gcacgactcg tcgccggcca tcaagaagat
      601 cggctacacc atggtcggcg accccaccgg caccatcagc cgcaacttcg aggtcatgat
      661 cgaggaactc ggcctcgccg accgcggcac cttcgtggtc gatcccgagg gcaagatcca
      721 gatcgtcgag atcaccgccg gcggcatcgg ccgcgacgcc ctggaactgc tgcgcaaggt
      781 caaggccgcc cagtacgtcg ccagccaccc gggcgaggtc tgcccggcca agtggcagga
      841 aggcgagaag accctcgccc cgtcgctcga cctggtcggc aagatctgat ccctcgcccc
      901 cttcgtcatg gccgggctcg acccggccat ccacgcggcg ccggccgccc tcagccatac
      961 ggcccccacg tggatgcccg gatcaagtcc gggcatgacg gcggaggggc ggacagaagg
     1021 aacgagtcat gttggatgaa gccatcaagg gccagttgcg ggcctatttc gcgaagatca
     1081 cccagccggt cgaactggtg gcgtccctgg acgacggcgc caagtcgcag gagatggacg
     1141 cgttgctgcg cgatgtcgcc gcgctgtccg accagatcac cctcgtgcag ggcgacaacg
     1201 cgcgcacacc gtccttcgcc atcaaccgcg tcggttcgga tgtcggcgtg cgtttcgccg
     1261 gcctgcccat ggggcacgaa ttcaactcgc tgatcctggc cctgctgcag gtgggcggcc
     1321 atccgcccaa ggagagcgcc gaggtgatcg agcagatcaa ggcgctggac ggcgactacg
     1381 tgttcgagac ctatttctcg ctgtcctgcc agaactgccc cgacgtggtg caggcgctga
     1441 acctgttggc ggcgctgaac ccgtgcatca agcacgtcgc catcgacggc gccctgttcc
     1501 aggacgaggt gacggcgcgg caggtgatgg cggtgccggc ggtgttcctc aacggccagc
     1561 ctttcgccca gggccgcatg ggcctggagc agatcctggc caggctcgac accggcgcgg
     1621 cggttcgcga ggccgagaag atcaaggcca aggatgcctt cgacgtgctg gtggtgggcg
     1681 gcggcccggc cggcgcggcg gcggccatct atgccgcgcg caagggcatc cgcaccggtg
     1741 tggtggccga acggttcggc ggccaagtgc tggacaccat ggcgatcgag aatttcatct
     1801 cggtgcccca taccgaaggc ccccggctgg ccgcgtcgct ggaggcccac gtcaaggaat
     1861 acggcgtcga cgtgatgaac ctgcaacggg ccgaaaagct ggtgcccggc gatttgatcg
     1921 aggtgcacct ggccggcggc gccaccgtca aggcacgctc ggtgatcctg tccaccggcg
     1981 cccgctggcg caccatgaac gtgccgggcg aggaccagta ccgcaacaag ggcgtcgcct
     2041 tctgccccca ttgcgacggc ccgctgttca agggcaagcg cgtggcggtg atcggcggcg
     2101 gcaattctgg ggtcgaggcc gccatcgacc tggccggcat cgtcgcccat gtcaccctga
     2161 tcgagttcga cggcaagctg cgcgccgatg aggtgctgca ggccaagctg cgcagcctgc
     2221 ccaacgtcga tgtcgtcacc tcggcccaga ccaccgaggt ccacggcgac ggcgccaagg
     2281 tcaccggcct gtcctatgcc gaccgcaaca ccggacaggc gcggcggctg gatttggacg
     2341 gggtgttcgt gcagatcggc ctggtgccca acaccgaatg gctgagggga accgtcgcgc
     2401 tcagcccgcg cggcgagatc gaggtggatg ccaagggcca gacttcgatc cccggcgtgt
     2461 tcgccgccgg cgacgcgacc acagtgccct acaagcagat catcatcgcc atgggcgaag
     2521 gcgccaaggc cagcctgtcc gccttcgacc acctgatccg caagacgccg cccccgggcc
     2581 gataaaaagt cccgtcattc ccgcgcaggc gggaatccat gcttcggcta ctcagtatgt
     2641 cgcggtcagg ctccgctccc gccccaacat ggatccccgc ctgcgcgggg atgacgtcgg
     2701 ggattgggag ccctcagcag caaaaggccc gccggtttcc cggcgggcct cgtcgctttc
     2761 gcaggaaccg aagatcaggc gcggttcatg cggttctcga tcaggtcgtc gacgacggtc
     2821 ggatcggcca gggtcgaggt gtcgcccagc gcgccgaact cgttctcggc gatcttgcgc
     2881 aggatgcggc gcatgatctt gcccgaacgg gtcttgggca ggccgggggc ccactggatc
     2941 aggtcggggg tggcgatcgg gccgatttcc ttgcggaccc agttcaccag ttcctt
//
LOCUS       DATIKR010000373         1796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_53754, whole genome shotgun sequence.
ACCESSION   DATIKR010000373 DATIKR010000000
VERSION     DATIKR010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53754"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VLL76_05945"
     CDS             complement(<1..183)
                     /locus_tag="VLL76_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HSV29077.1"
                     /translation="MTISGKARLAGVIGWPVGHSRSPLLHGFWLDRLGIDGAYVPLAV
                     KPEDFATVVAALPKMGF"
     gene            complement(180..770)
                     /locus_tag="VLL76_05950"
     CDS             complement(180..770)
                     /locus_tag="VLL76_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HSV29078.1"
                     /translation="MIVLASGSATRAKMLESAGVEFTIDTAAVDEAAIKASMRQEKAK
                     PGQVAEVLAELKATRVSARHPGAIVVGADQMLDCDGQWFDKPDNVAAAREQLKALRGK
                     THRLTSSVVAVRDGRRIWHHTDEARLTMRAFTEVFLERYLAKVGEAATASVGAYQLEG
                     RGAQLFMAVEGDHFTVLGLPLLPLLDFLRENGELMP"
     gene            complement(767..1600)
                     /locus_tag="VLL76_05955"
     CDS             complement(767..1600)
                     /locus_tag="VLL76_05955"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HSV29079.1"
                     /translation="MRTFHLHLVSDATGETVTSVARACMVQFEGMHAVQHNWWLVRTQ
                     GQVERVIAGIEQHPGIVLCTVVESGVRAVLEEACRHMHIPFVAVLDPVMGALSSYLEA
                     EMSAPMPGRQYQLDAEYFARIDAMQYTLAHDDGQLMDDLSDADIVVVGVSRTSKTPTC
                     MYLANRGFKCANYPLVPNVPLPPQLENIKAGPLVVGLTKDPKSLSDIRRTRLRFLNQD
                     EESSYAQFELVREEVASARRLFTRHGWPVVDVTRRSIEEASATIMQLHAQHVAKRENG
                     Q"
BASE COUNT          299 a          607 c          590 g          300 t
ORIGIN      
        1 aaaccccatc ttgggcaggg ctgcgaccac agtggcgaaa tcctcgggct tgaccgccag
       61 cggcacatag gcgccgtcga tgcccagccg gtcgagccag aacccatgca gcagcggcga
      121 gcgcgaatgg cccaccggcc acccgatcac accggccagc cgcgccttgc cggaaatggt
      181 catggcatca gctccccgtt ctcgcgcagg aaatccaaca gcggcagcag cggcagcccc
      241 aggacggtga aatggtcgcc ctccaccgcc atgaacaact gggcgccgcg accttccaac
      301 tgataagccc ccaccgacgc ggtcgccgcc tcacccacct tggcgaggta gcgctcgagg
      361 aagacctcgg tgaaggcgcg catggtgaga cgggcctcgt cggtgtggtg ccagatgcgg
      421 cggccatcgc gcaccgccac caccgaggag gtcaggcggt gggtcttgcc gcgcagggcc
      481 ttcaattgct cgcgcgccgc cgccacattg tcgggcttgt cgaaccattg gccgtcgcaa
      541 tccagcatct ggtcggcgcc gacgacgatg gcgccggggt ggcgggccga cacccgcgtc
      601 gccttgagtt cggccagcac ctcggccacc tggccgggct tggccttttc ctggcgcatg
      661 gacgccttga tcgccgcttc gtccacggcg gcggtgtcga tcgtgaactc caccccggcg
      721 ctttccagca tcttcgccct ggtggccgaa ccggacgcca gcacgatcat tgcccgttct
      781 cccgcttggc aacgtgctgg gcgtgcaatt gcatgatggt ggccgaggct tcctcgatcg
      841 agcgccgcgt cacgtccacc accggccagc catgccgggt gaacagccgg cgggcggaag
      901 cgacctcttc ccgcaccagc tcgaattggg cgtaggacga ttcctcgtcc tgattgagga
      961 agcgcaggcg ggtgcggcgg atgtcggaca ggctcttggg gtccttggtc aggcccacca
     1021 ccagcggccc cgccttgatg ttctccagtt gcggcggcaa cggcacgttg ggcaccaggg
     1081 gataattggc gcatttgaag ccgcggttgg ccaggtacat gcaggtcggc gtcttcgagg
     1141 tgcgcgacac ccccaccacc acgatgtcgg cgtcggacag gtcgtccatc aactggccgt
     1201 cgtcatgggc gagagtgtat tgcatggcgt cgatgcgggc gaaatattcg gcatccaact
     1261 ggtactggcg gcccggcatg ggcgcgctca tctcggcttc cagatagctg gacagcgccc
     1321 ccatcaccgg atcgagcacg gcgacgaacg ggatgtgcat gtggcggcag gcttcctcga
     1381 gcaccgcgcg cacgccggat tccaccaccg tgcacagcac gatgccggga tgctgctcga
     1441 tgccggcgat cacccgctcg acctggccct gggtgcgcac cagccaccaa ttgtgctgga
     1501 cggcgtgcat gccctcgaac tgcaccatgc aggcgcgggc gacggaggtc acggtttcgc
     1561 cggtggcgtc ggaaaccaga tggaggtgaa aggtgcgcat ggcctgtgga aagcgtccaa
     1621 tcctggggat aagtgggggt gccgccgggg agcgcgagat tcgctcccca ttcgggtacc
     1681 ggtcgtccga ccgatcgccc ctgtgttcat aatatcggcc ggcggcgcga gaatagcgtg
     1741 aatcgtcggc cggggcaccc gctttccccg ttatccacct ctttcgggat acctct
//
LOCUS       DATIKR010000374         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_199083, whole genome shotgun sequence.
ACCESSION   DATIKR010000374 DATIKR010000000
VERSION     DATIKR010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199083"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..305)
                     /locus_tag="VLL76_05960"
     CDS             complement(81..305)
                     /locus_tag="VLL76_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29080.1"
                     /translation="MPKKPAKKAAPPKKQSATDKMIAECVKRAQARKRSGQTDREWRE
                     QYAASLKVEGDSAPMSKTPFDGEATKKKVG"
     gene            complement(344..967)
                     /locus_tag="VLL76_05965"
     CDS             complement(344..967)
                     /locus_tag="VLL76_05965"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29081.1"
                     /translation="MTDTTPSPDLTIDFVGGAVGYRQRHGGGLGQALCKAAGFGKGRV
                     PEVVDATAGLGRDSFLLASMGARVTMIERSAEVHALLRDALERARAAGPDHAAIVDRM
                     TLLHGDARQLLPGLAPEVVLVDPMHPPRKNSALVKKEMRVLRELVGADPDSFELMQAA
                     LACARKRVVLKWPLRADPMAGLPRPSHQIVGKTTRYDVFMILDNGAS"
     gene            1050..1334
                     /locus_tag="VLL76_05970"
     CDS             1050..1334
                     /locus_tag="VLL76_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29082.1"
                     /translation="MSKIRSGSSFLLKLVGYGAALGGLGLGAAALMVDAGELQVLFGV
                     IALGGLLIAVAGGVLAALGALPGLGRKRAAAPTLSPEQQQLRDSQEFLNR"
     gene            1563..2006
                     /locus_tag="VLL76_05975"
     CDS             1563..2006
                     /locus_tag="VLL76_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018507459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligand-binding protein SH3"
                     /protein_id="HSV29083.1"
                     /translation="MLIAGFPTDGVVTVNRVVLKQGYDVDDLQERVAMLCENVKTFHS
                     DTGFVGGFVCLNSGQVSNEGSTVGQVVENPLKGREALIVTFWRSFEQHEQSHRSPTFQ
                     PLFRDVLELCENGNEEIAYEMLWQGKAYSKAEAEAARHAKAAHAA"
BASE COUNT          336 a          692 c          636 g          376 t
ORIGIN      
        1 gaaaccatcc gcgacaagct ggaccagcgc ctggtccgca tgttcagcaa gatgctggtc
       61 gaggcgacgc tgccggcagc ctagccgacc ttcttcttgg tcgcctcgcc gtcgaacggc
      121 gtcttgctca tgggcgcgct gtcgccctcg accttcagcg aggcagcata ttgctcgcgc
      181 cattcccggt cggtctgacc cgaacgcttg cgcgcctggg cccgcttgac gcattcggcg
      241 atcatcttgt cggtggcgct ctgcttcttg ggcggcgccg ccttcttggc cggcttcttg
      301 ggcatgggaa cctccgtgcg acccgaaggc accaccatgg gcgctatgac gcgccgttgt
      361 cgaggatcat gaaaacgtcg tagcgcgtgg tcttgccaac gatctggtgc gacggcctgg
      421 gcaggcccgc catgggatcg gcccgcaacg gccatttcag caccacccgc ttgcgggcac
      481 aggccagcgc cgcctgcatc agctcgaagg aatcgggatc ggcgcccacc agttcgcgca
      541 gcacccgcat ctccttcttc accagggcgc tgttcttgcg cggcggatgc atgggatcga
      601 ccagcaccac ctcgggcgcc aggccgggca gcaattggcg ggcgtcgcca tgcagcaggg
      661 tcatgcgatc gacgatggcg gcatgatccg gccccgccgc ccgcgcccgc tccaacgcgt
      721 cgcgcagcag cgcatgcacc tcggccgagc gctcgatcat cgtcacccgc gcgcccatgg
      781 aggccagcag gaaagaatcg cgccccagcc cggcggtggc gtccaccacc tcgggcaccc
      841 gccccttgcc gaaccccgcc gccttgcaca acgcctgccc caacccgccg ccatggcgct
      901 ggcgatagcc gacggcgccg ccgacgaaat cgatggtgag atcgggggaa ggagtggtgt
      961 ccgtcatggt cggactggtc taacccaaat cggttttgat tgccgctgta ttcttggcgg
     1021 aggacccgaa cccggctacc ctgcttggca tgagcaagat ccgatccggt tcgtccttcc
     1081 tgttgaagct tgtcggctat ggcgccgcct tgggcgggct tggcctgggc gccgccgcgt
     1141 tgatggtgga cgctggggaa ttgcaggtct tgttcggcgt catcgccctg gggggcctgc
     1201 tgatcgccgt tgccggcggc gtcctggccg cccttggcgc cctgccgggc ctgggccgga
     1261 aaagggcggc cgcgcccaca ctcagccccg agcagcagca attgcgcgat tcccaggaat
     1321 tcctgaaccg ctgacaaggc tgccaatccc tccacaaacg tcgtcatccc cgcgaaagcg
     1381 gggatccatg ttggggcgcg taggatgtcc gcccactaca tcgcgtggcc gatgcatgga
     1441 ttcccgcttt cgcgggaatg acgggacctt ttcggccaag cccctatttt gcctgtggtt
     1501 gataattaga attattctct atattagaga cccatgatac tttatcgatt aggaggcccc
     1561 ccatgctgat cgccggattc cccaccgatg gcgtcgtcac cgtcaatcgc gtcgtgctca
     1621 agcagggtta tgacgtcgat gacctgcagg agcgggtcgc catgctgtgc gagaacgtca
     1681 agaccttcca ctccgacacc ggcttcgtcg gcggtttcgt ctgcctcaat tcgggccagg
     1741 tgtccaacga gggctcgacc gtcggccagg tggtggagaa cccgctcaag ggccgcgagg
     1801 cgttgatcgt caccttctgg cgcagcttcg agcagcacga gcagtcgcat cgcagcccga
     1861 cctttcagcc gctgttccgc gacgtgctcg aactgtgcga gaacggcaac gaggaaatcg
     1921 cctatgagat gttgtggcag ggcaaagcct actcgaaggc cgaggccgaa gctgcccgac
     1981 acgccaaggc cgcccacgcc gcctgacctg tcaacctcat cccccgggag gattgctgta
//
LOCUS       DATIKR010000375         3176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_199110, whole genome shotgun sequence.
ACCESSION   DATIKR010000375 DATIKR010000000
VERSION     DATIKR010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199110"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VLL76_05980"
     CDS             <1..587
                     /locus_tag="VLL76_05980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III"
                     /protein_id="HSV29084.1"
                     /translation="FLRVLPQANHRLAASMALFAGALRSGDARQIISDAVTRGLERAG
                     KRDVADKVKGDVDKLSAESTRTLGGGEWRAYAMPFVNGAAIEPIRLFVRQVGGDDERK
                     RSGGQGDGQRFILEISMRALGRIQLDGMVRRDDKTFDLIMRTQDPLPADMRRDILAIF
                     ADNCEVCGTKGMVVFQTGRFVDLPPDTNPTALMV"
     gene            657..2153
                     /locus_tag="VLL76_05985"
     CDS             657..2153
                     /locus_tag="VLL76_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSV29085.1"
                     /translation="MTTLSQDPKGYYAVLGLAPGATFGAIKAAYRNRVKSVHPDRNRQ
                     AGAAEEFQRLVEAYTILKDVVRRAEYDAGIRHGVPEDDPSAPAIPLACGSCGKVTAQP
                     RYVLFHRVKSFLLWARSQPVEGIFCRDCADHAAVRASTATWAWGWWSPPGLVLTPLAL
                     LRNLLGGTMPKRDNARLLLRQARAFVERGDLDIARSLADQAARFARDPAHRKMVEDLR
                     IRTQGASGRKLKSRWGIGGGAFVAQALPLLALPAVVALFVLIWTKPWNQPVTAGPANI
                     VVKPALIGEIRHVAVGELKVRQDPAENSPVLTLLDRFTTVTVEAAPEDGQWTRVKTPA
                     GVAGWVPSRALYAGSGGRIKTEWCAENRGGRPESGEVLSRRASGDHRLLIRNDGRRDA
                     VVKLKTQAGSTVASYFVPATYHVGIAGIPEGTYLIEFASGSNWSRACGLFVDNMQTAR
                     LPFTLTFRPLSAARAATVGAMPEITLVTAPGDVKAPQPITAERFLADE"
     gene            complement(2298..2783)
                     /locus_tag="VLL76_05990"
     CDS             complement(2298..2783)
                     /locus_tag="VLL76_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007882949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dps family protein"
                     /protein_id="HSV29086.1"
                     /translation="MAKKTSQTIDIGIDEKTRKKIGEGLSRLLADTYTLYLKTHNFHW
                     NVTGPLFNTLHLMFEQQYNELALAVDLVAERIRALGFPAPGTYKEFAKLTSLKEEDGV
                     PSAEDMIRILVKDQEAVVRTARSIFPMVDDAHDEPTADLLTQRMQVHEKTAWMLRSLL
                     G"
     gene            complement(2804..2998)
                     /locus_tag="VLL76_05995"
     CDS             complement(2804..2998)
                     /locus_tag="VLL76_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014998113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HSV29087.1"
                     /translation="MPTKTLTFAAVHFTVAFTVAYLLTGSVAVGGLVAVVEPLCNTVA
                     YHFHEKVWAAMGRTGHAVAG"
BASE COUNT          509 a         1074 c         1079 g          514 t
ORIGIN      
        1 aattcctgcg cgtgctgccc caggccaacc accgcctcgc cgccagcatg gccctgttcg
       61 ccggcgccct gcggtcgggc gacgcccgcc agatcatctc ggacgcggtg acgcgcggcc
      121 tggaacgcgc cggcaagcgc gacgtcgccg acaaggtcaa gggcgacgtc gacaagctgt
      181 cggccgaatc cacccgcacg ctgggcggcg gcgaatggcg cgcctatgcc atgccgttcg
      241 tcaacggcgc cgcgatcgaa cccatccgcc tgttcgtccg ccaggtgggg ggcgacgacg
      301 agcgtaagcg atcgggcggg cagggcgacg gccagcgctt catcctggag atttccatgc
      361 gcgcgctggg ccggatccag ctcgacggca tggtgcggcg cgacgacaag accttcgacc
      421 tgatcatgcg cacgcaggac ccgctgccgg ccgacatgcg gcgcgacatc ctggcgatct
      481 tcgccgacaa ttgcgaggtg tgcggcacca agggcatggt cgtgttccag accggccggt
      541 tcgtcgacct gccacccgac accaacccca ccgccttgat ggtgtgaccc ctgaccgatg
      601 gtgggccggc acggcgattg cttgacgcca gcccgttttc gccgaaatag agcgtgatga
      661 ccactctgtc gcaggacccc aaaggctatt acgcggtgct cggactggcg ccgggggcga
      721 cgtttggcgc catcaaggcg gcctatcgca accgggtcaa gtcggtgcat cccgaccgta
      781 accgccaagc cggcgcggcc gaggaattcc aacggcttgt cgaggcctac accatcctca
      841 aggacgtggt gcggcgggcg gaatacgacg ccggcatcag gcacggcgtg cccgaggacg
      901 acccctcggc ccccgccatc ccgctggcct gcggcagttg cggcaaggtc acggcgcagc
      961 cgcgctacgt actgttccac cgggtaaaaa gtttcctgct gtgggcgcgc agccagccgg
     1021 tggagggaat cttttgccgg gattgcgccg accatgccgc cgtgcgcgcc tcgaccgcca
     1081 cctgggcctg gggctggtgg tcgccgcccg gcctggtgct gacgccgctg gcgctgctgc
     1141 gcaacctgct gggcggcacc atgcccaagc gcgacaacgc tcgcctgctg ttgcgccagg
     1201 cccgcgcctt cgtcgaacgc ggcgatctcg acatcgcccg ctcgctggcc gaccaggccg
     1261 cccgcttcgc ccgcgacccg gcccaccgca agatggtcga ggacctgcgc atccgcaccc
     1321 agggcgcgtc ggggcgcaaa ttgaaaagcc gctggggcat cggcggcggc gccttcgtcg
     1381 cgcaggcact gccgctgctg gcgctgccgg cggtggttgc gctgttcgtg ctgatctgga
     1441 ccaagccgtg gaaccagccg gtgaccgccg gccccgccaa catcgtggtc aagcccgctt
     1501 tgatcggcga gatccgccac gtggcggtgg gcgagttgaa ggtgcggcag gacccggccg
     1561 agaattcgcc ggtgctgaca ctgctcgacc gcttcaccac cgtcaccgtc gaggcggcgc
     1621 ccgaggacgg ccagtggacc cgggtcaaga cgccggccgg ggtggccggc tgggtgccgt
     1681 cgcgggcgct gtatgccggc tcgggcggcc gcatcaagac cgagtggtgc gccgagaaca
     1741 ggggggggcg cccggaatcc ggcgaggtgc tgtcgcgccg cgccagcggc gaccatcgcc
     1801 tgctgatccg caacgacggc cgccgcgacg ccgtggtcaa gctcaagacc caggcgggca
     1861 gcacggtggc gtcctatttc gtgccggcga cctatcacgt cggcatcgct ggcatccccg
     1921 agggaaccta tctgatcgag ttcgcctcgg ggtccaactg gtcgcgcgcc tgcggcctgt
     1981 tcgtcgacaa catgcagacg gcgcggctgc ccttcaccct gaccttccgc ccgctgtcgg
     2041 cggcccgcgc cgcgaccgtc ggcgccatgc cggaaatcac gctggtcacg gcgccgggcg
     2101 acgtcaaggc accgcagccg atcacggcgg aacggttcct ggccgacgag tagcggggcg
     2161 gcctagcgca ttttccgctc tgacagttca gagcggaaaa tgcgacaagc ccgagcggcg
     2221 tctgagcctg gctcgccccg gaggggcggc cgccaaaggc aaaaactaga gccggttcca
     2281 tttgaatgga aacggcttca gcccagcagg ctgcgcagca tccacgcggt cttttcatgg
     2341 acctgcatgc gttgggtcag caggtcggcg gtgggttcgt cgtgggcgtc gtccaccatg
     2401 ggaaagatcg agcgggcggt gcggacgacg gcttcctggt ccttgaccag gatgcggatc
     2461 atgtcctcgg ccgacggcac gccgtcctct tccttcagcg aggtcagctt ggcgaattcc
     2521 ttgtaggtgc cgggggcagg gaagcccagg gcgcggatgc gctcggccac cagatctacc
     2581 gccagggcca gctcgttgta ttgctgctcg aacatcagat gcagcgtgtt gaacaacggg
     2641 ccggtgacgt tccaatggaa attgtgggtc ttgagataga gcgtgtaggt gtcggccaac
     2701 aggcgcgaca ggccctcgcc gatcttcttg cgagtcttct cgtcgatccc gatgtcgatg
     2761 gtctggctgg tcttcttcgc catctctctc tcctttggtc ttcttacccc gcgacggcgt
     2821 ggcccgtccg gcccatggcc gcccacacct tctcatggaa gtggtaggcc acggtgttgc
     2881 acaacggctc gaccacggcg accaagccgc cgacagcgac agagccggtc aacagatacg
     2941 ccaccgtgaa agcaacggtg aagtgaactg ctgcgaaggt caacgtcttg gtcggcatgg
     3001 ccgtctcccg gtgctgagcg aacgccttac ctttaacagg aggcgcgctt atcgggctaa
     3061 cggggaatat gggaggctgt gatcgatgaa atcgatatgt ggggtgaggc ggaaaaggtg
     3121 cgggtgcccc cccttccgtc atgcccgtgc ttgacacggg catccacgcg gctccg
//
LOCUS       DATIKR010000376         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66494, whole genome shotgun sequence.
ACCESSION   DATIKR010000376 DATIKR010000000
VERSION     DATIKR010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66494"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(369..1391)
                     /locus_tag="VLL76_06000"
     CDS             complement(369..1391)
                     /locus_tag="VLL76_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008950131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV29088.1"
                     /translation="MRLSLRLLGLGFAALVAGNTAAEAAEVNLYSARKDHLIKPLLDQ
                     FTAATGIKVNLLSAGEDQLIERMKSEGANSPADVLLTTDVARLHKARVEGLLQPATSP
                     AIDKNIPARFRDPQGYWHGLSARARVVFYAKDRVKPAELSTYEDLADPKWKGKICVRS
                     SSSVYNQSLLAGIIAINGPEKAEAWAKGIVDNMARKPQGGDRDQISAVAAGQCDIAIA
                     NTYYFGEMLKSAKPEEKAAAEKVALFWPNQQGRGAHINISGAGVAKSAKNKAEAIKLI
                     EFLSSVEAQRFYAEANNEFPVNPAVQPSGLVASWGAFKAEDIPVAMLGENNPQAVRIF
                     DRVGWR"
     gene            1653..>2316
                     /gene="rlmN"
                     /locus_tag="VLL76_06005"
     CDS             1653..>2316
                     /gene="rlmN"
                     /locus_tag="VLL76_06005"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0002935 - tRNA
                     (adenine(37)-C2)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0070040 - rRNA
                     (adenine(2503)-C2-)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HSV29089.1"
                     /translation="MEKKNLIGLSREDLAAEMASIGEKPFRAKQVWHWLYNRGETEFE
                     RMTSISKVMQAKLAEHYVVKRPELVTEQLSVDTTRKWLFRFDDANEAETVYIPDEDGQ
                     RGSVCISSQVGCTLTCKFCHTGTQVLVRNLTSAEIVGQFLAARDTYGEWPTPDDTNRL
                     LSNIVMMGMGEPLFNFDNVATALKILMDGEGVAVSKRRITLSTAGVVPMMKRCGEELG
                     VNL"
BASE COUNT          395 a          699 c          793 g          429 t
ORIGIN      
        1 ggaggcgtct ggaagctccg agaaccgccc ttcggcgatg gcgtcgatgc accgcgccag
       61 atcgatgtcc ccgacggcgg catccaccac aacgctcgtc gccatatgca tggttccccc
      121 ggaaacttgc tacccagcat gggcaagggt acttccggtt tccgggggaa atctacacgc
      181 aatatgtggg aattcggtta gttgagctta tgcttatgga ttagggttgc tacccgtttt
      241 tacaggcttc tcaacgggtt gcgcgttttg cgggagagtc ctcctcaccg ccagcgcctt
      301 ggctgcggcg gcgatggcgg cgggtgtcag attcttccaa aggtacacgg gttctcctgt
      361 tcctggggtc agcgccagcc gacgcggtcg aagatgcgaa cggcctgcgg gttgttctcg
      421 ccaagcatgg cgacggggat gtcctcggcc ttgaaggcgc cccacgaggc gaccaggccg
      481 gacggctgga ccgccgggtt gaccgggaat tcgttgttgg cctcggcata gaagcgctgg
      541 gcctcgaccg acgacaggaa ctcgatcagc ttgatggcct cggccttgtt cttggccgac
      601 ttggccacgc ccgcgcccga gatgttgatg tgggcgccgc ggccctgctg gttcggccag
      661 aacagcgcca ccttctcggc ggcggccttc tcctcgggct tggccgactt cagcatctcg
      721 ccgaagtaat aggtgttggc gatggcgatg tcgcactggc cggcggccac ggcggagatc
      781 tggtcgcggt cgccgccctg gggcttgcgg gccatgttgt cgacgatgcc tttggcccag
      841 gcctcggcct tttccgggcc gttgatggcg atgatgccgg ccagcaggga ctggttgtag
      901 accgacgacg acgaccgcac gcagatcttg cccttccact tggggtcggc caggtcctcg
      961 taggtggaaa gctcggccgg cttgacccgg tccttggcgt aaaacaccac acgggcgcgg
     1021 gcggacagac catgccaata gccctgcggg tcgcggaagc gggcggggat gttcttgtcg
     1081 atggccggcg aggtcgccgg ctgcagcagg ccctcgacgc gggccttgtg caggcgggcg
     1141 acgtcggtgg tcagcagtac gtcggccggg ctgttggcgc cttcgctctt catgcgctcg
     1201 atcaactggt cctcgccggc cgacagcagg ttgaccttga tgccggtggc ggcggtgaac
     1261 tggtcgagca gcggcttgat caggtgatcc ttgcgggccg agtacaggtt gacctcggcg
     1321 gcttcggcgg cggtattgcc ggccaccagg gcggcgaagc cgaggccgag aaggcggagc
     1381 gaaaggcgca tgatggtaac ccttgtgcgg tcagtcgata cgagtgcgac gcaatcgcaa
     1441 agccgtgccg tggaaagaat gccgaagccg ggccgtccag gcaagtgggc aaatgcaaat
     1501 cattcgcaac ttgaccattg ggataccata aagatcttgg ggttgaaagg gggattcgac
     1561 gtcccccttc cggccgggca ggggaggggg gcgatcccgg gctggggcac aaaggttgca
     1621 ctttggcgcc cggccgctta tctgttggcc ccatggaaaa gaagaacctg atcgggcttt
     1681 cgcgcgagga tctggccgcc gagatggcgt ccatcggcga gaagccgttc cgcgccaagc
     1741 aagtgtggca ctggctctat aatcgcggcg aaaccgagtt cgagcgcatg acctcgatct
     1801 cgaaggtgat gcaggccaag ctggccgagc actacgtcgt caagcgcccc gaattggtga
     1861 ccgagcaatt gtcggtggac accacccgca agtggctgtt ccgcttcgac gatgccaacg
     1921 aggccgagac cgtctacatc cccgacgagg acgggcagcg cggctcggtt tgcatcagct
     1981 cgcaggtcgg ctgcaccctg acctgcaagt tctgccacac cggcacccag gtgctggtgc
     2041 gcaacctgac ctcggccgag atcgtcgggc agttcctggc ggcgcgcgac acctatggcg
     2101 agtggccgac tcccgacgac accaaccgcc tgctgtccaa catcgtgatg atgggcatgg
     2161 gcgagccgct gttcaatttc gacaacgtcg ccaccgcgtt gaagatcctg atggacggcg
     2221 agggcgtcgc cgtctcgaag cgccgcatca cgctgtccac cgccggcgtg gtgccgatga
     2281 tgaagcgctg cggcgaggaa ttgggcgtca atctgg
//
LOCUS       DATIKR010000377         6891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_151219, whole genome shotgun sequence.
ACCESSION   DATIKR010000377 DATIKR010000000
VERSION     DATIKR010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 6891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6891
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151219"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2830)
                     /locus_tag="VLL76_06010"
     CDS             complement(<1..2830)
                     /locus_tag="VLL76_06010"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSV29090.1"
                     /translation="MAAAKTRKFRIDYKALLTATGKLAVDVALGQWAEALKDLVEAFA
                     PIEADAQPDELAAVLIKRALARAFAEMLREEVHAGRLTRDGFTALSGALADMVGDEHT
                     FVPADARRPDRMAMLAETGTALEAGLIKAGIAPERAASVARRLPSYFAVAFDEEWRAD
                     RAFDAIPGLRTTGASEQAEREQGWRRYHTWLRRQVAEPVFGESFSLEQVYVFPRAWVS
                     DKPAGAAERRRDGGEARDAKPARRVVEPWKEVEHWVASDNGDDAVRVLGGPPGSGKSS
                     FARMLAARLAGDHNVLLIPLHRIDPTRELIDEVGAFVEYDGFLPHNPLSPKSDETLLL
                     IFDGLDELEMRGRIAHEVVRDFIRAVRDLLRDHNRHRARLKVLMGGREVVLQAVASEF
                     KKPGQVMHLLPYVVPEHEFSQFGAGTELLKADQRDEWWRSYGKLSGRGYDGMPEHLRK
                     GELGEVTGQPLLNYLVARALDRGKLTTADANVNDVYRELVAEVYERNYARDRAADVPP
                     HPAVENIQTIEDFFELLEEVSLAVWHGHGRTVTRREIEAYARRGKVDGLLNALADGAE
                     EGVSKLLLSFYFREHGTHRGEEKTFEFTHKTFGEYLVARRIVRTIGMVADKLGASDRR
                     DRWDYPRAQVHWAETCGPGRWDNDLYRFLNREVAGKPPVTVAAWHSSLLALLNGLADG
                     EWPMERVRHAVHDAVPRFGDQVVWAVNAEQALYAAIQACAINAGTRSVISEHTLERTL
                     RRMQGMGGLYAERTELEHAVMFGLDMVGTTFAGSNIDSCGVLGSCMVNSDFESAVMTN
                     CRFSECDFTDSVFDYLIAEGLIITRCNLSATYFFNAKLSKANFEASLLSGCEFRSANL
                     KDASFIRCDGFEVDFSDANLSAATLVRASLVSSLFVDCVAADARFDHADLTDSDFDGA
                     NLKGASFVHARLRGVDFRAAYLKNANFSH"
     gene            complement(2904..3365)
                     /locus_tag="VLL76_06015"
     CDS             complement(2904..3365)
                     /locus_tag="VLL76_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HSV29091.1"
                     /translation="MSASSSAPTTALPFWRTKALTSMSPDEWESLCDGCGKCCLHKLE
                     DEDTGEIAYTNVACRLLNLGTCRCKDYDNRKAHVPDCVRLTPEAVADLSWLPSTCAYR
                     LLSEGKDLPWWHPLVSGDPDSVHLAGISVRNRVVAENRAGPLEHHIVDWPA"
     gene            complement(3268..4551)
                     /gene="phaZ"
                     /locus_tag="VLL76_06020"
     CDS             complement(3268..4551)
                     /gene="phaZ"
                     /locus_tag="VLL76_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HSV29092.1"
                     /translation="MLYHIHELQHAAFAPVRLFAEAVQQFYSHPWVPVAYTQFGRAMA
                     AGAELVERTTRRYPKPEFGLDRTKIDGVEVPVREVVVYDKPFCQLLHFQRQTDRRDPR
                     VLVVAPMSGHYATLLRGTIETLLPDHDVYVTDWIDARDVPLSEGKFDLDDYIDYVIEL
                     LHFLGADTHVLAVCQPSVPVLAAVSLMAAANDPRQPCSMVLMGGPIDTRFNPTKVNQV
                     AKDKPLSWFEQTVINTVPYVHAGRGRRVYPGFLQLQGFMSLNPERHVGEHLNLFHNMV
                     RGDGDSAEKHREFYDEYLAVMDLPAEYYLQTLRTVFIDHDLPDGKMVSRGRKIDPGLI
                     RHTALMTIEGEKDDITGLGQTEAAHRLCTGLPESMRMHHVAAKVGHYGVFNGRRWREE
                     IYPNVREFIRTHDRLTVLADEGAHLHEPGRVGEPV"
     gene            complement(4736..6055)
                     /locus_tag="VLL76_06025"
     CDS             complement(4736..6055)
                     /locus_tag="VLL76_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HSV29093.1"
                     /translation="MAAPGIVLAAPSSGSGKTLATLGLLAHLVRRGVDVASAKVGPDY
                     IDPAFHAAATGRPCPNLDAWAMRPATLAGLVAGLSHGAELVVCEGVMGLFDGAAVASG
                     EHAGSTADVAALTGWPVVLVVDARGMSASAAAVVAGFARFRPDVAIKGVIFNKVSGER
                     HRRLISEALSAACPEVQQLGFLPPLPQLALPSRHLGLVQACEHPDLAAFFDTAARAVA
                     AHVDVDALLALARPAVLGGAMQPPVPPLGRHVAVARDEAFAFAYPAVLDGWHRAGVRL
                     SFFSPLAGEAPAGDADAVYLPGGYPELHAGLLSAGGFLPGLRDAAARGAVVFGECGGY
                     MVLGRALTDAEGRAWPMAGLLPVETSFKARKLHLGYRRAVLGWDGPLGRAGQEWRGHE
                     FHFASVTAEGDAPPLFTVSDAAGSDLGRSGLRVGKVMGSFVHLIDRA"
     gene            complement(6056..6664)
                     /locus_tag="VLL76_06030"
     CDS             complement(6056..6664)
                     /locus_tag="VLL76_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSV29094.1"
                     /translation="MAKKPNRTPLVAIIALIVVLAVAVGARMLVWSGGDHGGAGTASI
                     GGPFTLTDHDGKTASDADFRGRFMLIYFGYTFCPDVCPTSLGVTAAALDKLSPGDRRL
                     VAPIFISVDPERDRPAVLKDYVGAFHPDLIGMTGTPEQLAPVLKAYKVYAAKVKSDDP
                     QAYTMDHSSILYLMGPDGKFLAHFPHGTSADEVAAGLKKHLK"
     gene            complement(6678..>6891)
                     /locus_tag="VLL76_06035"
     CDS             complement(6678..>6891)
                     /locus_tag="VLL76_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV29095.1"
                     /translation="LAAAAASGDPLAGALGMLAFAIGTVPALFAVGVVGHFAVGRWRQ
                     PVLKWAPLLLVVNAVMLGFMALQMLA"
BASE COUNT         1282 a         2297 c         2217 g         1095 t
ORIGIN      
        1 catggctgaa gttggcgttt ttcagatagg cagcgcggaa gtcgacacca cggagacggg
       61 catggacaaa ggaagcaccc ttgaggttcg caccgtcaaa gtccgaatcc gtcaggtcag
      121 catgatcgaa gcgcgcatca gcggcaacgc aatcaacgaa cagggaggac accaaagaag
      181 cccgaacaag tgtggccgcg ctaagattgg cgtcactaaa atcgacctca aaaccatcgc
      241 agcggatgaa tgaagcgtct ttgaggttgg cgcttctgaa ttcgcatcca gaaagcaacg
      301 atgcctcaaa attcgcctta gacagtttag cattgaaaaa atatgtcgcc gacaagttgc
      361 accgcgtaat tataagaccc tctgcgatca agtagtcgaa taccgaatcg gtgaaatcgc
      421 attccgaaaa tctgcaattg gtcatgacgg cggattcaaa atccgagtta accatacatg
      481 atccaagtac accacacgag tcaatattag accccgcgaa tgtagtgcca accatgtcta
      541 atccaaacat cacagcgtgc tccagctctg tccgctccgc ataaagcccc cccattcctt
      601 gcatccgccg caacgttcgt tcgagagtat gctcgcttat aacgctccgc gtgccagcat
      661 tgatcgcgca ggcctggatg gccgcataga gcgcctgctc ggcgttgacg gcccagacca
      721 cctggtcccc aaaccgaggc accgcatcgt gcaccgcatg ccgaacgcgc tccatcggcc
      781 actcgccatc cgcgagccca ttcagcagag ccagcagcga ggaatgccac gcggcgaccg
      841 tgacgggcgg cttgccggcg acctctcgat tgaggaaacg gtaaaggtcg ttgtcccacc
      901 ggcccggtcc gcaagtctcc gcccaatgca cctgggcacg cgggtaatcc cagcggtcgc
      961 gtcgatccga ggcgccgagt ttgtcggcga ccatgccgat ggtgcgcacg atccttcttg
     1021 cgaccaaata ctcaccgaac gtcttgtgcg tgaactcgaa ggtcttctcc tcgccccggt
     1081 gagtgccgtg ttcacggaaa tagaacgaca gcagcagttt ggacacgcct tcttccgcgc
     1141 catcagccaa agcgttcaat agcccatcca cctttccccg tcgggcatag gcttcgatct
     1201 cccgccgggt caccgtccgg ccatgaccgt gccataccgc caagctcact tcctcgagca
     1261 gttcgaagaa atcctcgatc gtctggatgt tctcgacggc gggatggggt ggaacgtcgg
     1321 ccgcgcggtc gcgcgcgtaa ttgcgttcgt agacctctgc gacgagttcc cggtagacgt
     1381 cgttgacgtt cgcatcggcc gtcgtcaact tgccccggtc aagcgcgcgc gcgacaaggt
     1441 agttgagcag aggctgcccg gtcacctcgc caagctcacc ttttctcagg tgttcgggca
     1501 tcccatcgta gccacggccg gacagtttcc catagctccg ccaccattcg tcacgctggt
     1561 cggctttgag caattcagtt ccggcgccaa actggctaaa ttcatgttcc ggcaccacgt
     1621 agggcagcag atgcatgact tgccccggct tcttgaattc gctcgccacc gcctgaagca
     1681 caacctctcg ccctcccatc agcaccttaa ggcgagcgcg atggcggtta tggtcgcgaa
     1741 gcaagtcgcg gacggcccgg atgaaatcgc gaacgacttc atgagcgatc cggccacgca
     1801 tctccaactc gtccaagccg tcgaagatca gcaacagggt ttcgtcgctt ttgggcgaaa
     1861 gcgggttgtg cggcaggaag ccgtcgtatt cgacgaaggc gcccacttcg tcgatgagct
     1921 ctcgtgtcgg gtcgatgcgg tgaagcggga tcaatagcac gttgtgatca ccggcgagcc
     1981 tggctgccag catgcgggcg aacgaggact tgccggaccc cggcgggccg ccgagcaccc
     2041 gaacggcatc gtcgccgttg tcggacgcca cccaatgttc cacttccttc cacggttcca
     2101 cgacccggcg ggcgggcttg gcgtcgcgcg cttctccacc gtcacgccgt cgctccgccg
     2161 cgccggccgg cttgtcactg acccaggcgc gcggaaacac gtaaacctgc tcaaggctga
     2221 aactctcgcc gaacaccggc tcggcgacct ggcggcgcag ccaggtatga tagcggcgcc
     2281 acccctgctc ccgctcggcc tgctcgctgg ccccagtcgt ccgcagaccg ggtatggcgt
     2341 caaaagcccg atcggcacgc cattcctcgt cgaacgcgac ggcgaagtaa cttggcaggc
     2401 gacgggcaac ggatgcggcg cgttctgggg caatccccgc cttgatcaat cccgcctcga
     2461 gagccgtccc ggtttcggcc agcatcgcca tacggtcggg gcggcgggcg tcggccggta
     2521 cgaaggtgtg ctcgtcgcca accatgtcgg ccagcgcgcc ggagagcgct gtgaacccat
     2581 cgcgcgtcag acggccggcg tgaacctcct cgcgcagcat ttcggcaaat gcgcgggcca
     2641 aggcacgctt gattaagacg gccgccaact cgtcgggttg cgcatcggcc tctatcgggg
     2701 caaaggcctc aaccagatcc ttaagggctt ctgcccactg cccgagggca acatcgaccg
     2761 caagcttgcc ggtggcagtg agaagcgcct tgtaatcgat ccggaattta cgagtctttg
     2821 ccgccgccat tctttcctcc gtcaatacaa cgaaagataa gggcggcggg cgcaagcgtc
     2881 caccgtttaa gagaaaaaga cggtcacgcc ggccagtcca cgatgtggtg ttccagcggc
     2941 cccgcgcggt tttcggcgac gacgcggttg cgcaccgaga tgccggccag gtggaccgaa
     3001 tccgggtcgc ccgacaccag cgggtgccac cacggcaggt ccttgccctc ggacagcagg
     3061 cggtaggcgc aggtggacgg cagccacgac agatcggcca cggcctcggg cgtcaggcgg
     3121 acgcaatcgg ggacgtgggc cttgcggttg tcgtaatcct tgcagcggca ggtgcccagg
     3181 ttcagcagcc ggcaggcgac gttggtgtag gcgatctcgc cggtgtcctc gtcctcgagc
     3241 ttatgcaggc agcacttgcc gcagccgtca cacaggctct cccactcgtc cgggctcatg
     3301 gaggtgagcg ccttcgtccg ccagaacggt aaggcggtcg tgggtgcgga tgaactcgcg
     3361 gacattcgga tagatctcct cgcgccagcg ccgcccgttg aacacgccgt aatggccgac
     3421 cttggcagca acgtggtgca tgcgcatgct ttccggcagg ccggtgcaca ggcggtgcgc
     3481 cgcctcggtc tggcccaggc cggtaatatc gtccttttcg ccctcgattg tcatcagggc
     3541 ggtgtggcgg atcaggccgg gatcgatttt gcggccgcgc gacaccattt tgccgtcggg
     3601 cagatcgtgg tcgatgaaca cggtgcgcag ggtctgcagg tagtattcgg ccggcaggtc
     3661 catcaccgcc aggtattcgt catagaattc gcggtgcttt tccgccgaat cgccgtcgcc
     3721 gcgcaccatg ttgtggaaca ggttgaggtg ctcgcccacg tggcgctcgg ggttcaggct
     3781 catgaagccc tgcaattgca ggaagcccgg atagacgcgg cggccacggc cggcatggac
     3841 gtagggcacg gtgttgatca ccgtctgctc gaaccacgac agcggcttgt ccttggcgac
     3901 ctggttgacc ttggtcggat tgaagcgggt gtcgatcggg ccgcccatca gcaccatcga
     3961 gcagggctgg cgcggatcgt tggccgccgc catcagcgac accgccgcca gcaccggcac
     4021 cgacggctgg cacaccgcca gcacatgggt gtcggcgccg aggaaatgca gcagctcgat
     4081 cacatagtcg atgtagtcgt cgaggtcgaa cttgccctcg ctcaacggca cgtcgcgggc
     4141 gtcgatccag tcggtgacgt agacgtcgtg gtcgggcagc agggtctcga tggtgccacg
     4201 cagcagcgtg gcgtaatggc ccgacatggg cgccaccacc agcacgcgcg ggtcgcggcg
     4261 gtcggtctgg cgctggaagt gcagcaactg gcagaacggc ttgtcgtaga ccacgacttc
     4321 gcgcaccggc acctcgacgc cgtcgatctt ggtccggtcg aggccgaatt ccggcttggg
     4381 atagcgccgc gtggtgcgct cgaccagctc ggcgccggcc gccatggcgc gcccgaactg
     4441 ggtataggcc accggcaccc agggatggct gtagaattgc tgaaccgctt cggcgaacag
     4501 acgaacgggc gcgaacgccg cgtgctgaag ctcatggata tgatagagca tccgaacccg
     4561 actcccaaag acgaggtacc accaccggtc aattttgtga ccgaaggtat gaggtcatag
     4621 caatataatt atttcgtcag gggtgttccg cgcaacttga cataaccaaa gccatatgtt
     4681 gcggcgcaac aacgtgggca cagcatgccg gatcgcggtg aacggagagt aaagatcagg
     4741 cgcggtcgat caggtggacg aacgagccca tgaccttgcc gacgcgcagc cccgaccgcc
     4801 ccagatcgct gccggcggcg tcggagacgg tgaacagcgg cggcgcgtcg ccctcggcgg
     4861 tgaccgaggc gaagtggaat tcatggccgc gccattcctg gccggcacgg cccaacggcc
     4921 cgtcccaacc cagcacggcg cggcggtagc cgagatgcag cttgcgcgcc ttgaagctgg
     4981 tctcgaccgg cagcagcccg gccatgggcc aggcacggcc ctcggcatcg gtcagcgcgc
     5041 ggcccagcac catgtagccg ccgcattcgc cgaacaccac ggcgccgcgc gcggcggcgt
     5101 cgcgcaggcc gggcaggaag ccgccggccg acagcaggcc ggcatgcaac tcgggatagc
     5161 cgccgggcag gtagaccgcg tcggcatcgc cggccggcgc ctcgcccgcc agcggcgaga
     5221 agaacgacag ccgcacgccg gcacggtgcc agccgtccag caccgccgga taggcgaagg
     5281 cgaaggcctc gtcgcgcgcc accgccacat gccggcccaa cggcggcacc ggcggctgca
     5341 tcgccccccc cagtaccgcc ggccgcgcca gcgccagcag cgcatcgacg tccacatggg
     5401 cggcgaccgc gcgggcggcg gtgtcgaaga aggcggcgag gtcgggatgc tcgcaggcct
     5461 gcaccaggcc gagatggcgg ctgggcagcg ccagttgcgg cagcggcggc aggaagccca
     5521 gttgctgcac ctcggggcag gcggcggaca gcgcttccga gatcaggcgg cgatggcgct
     5581 cgcccgacac cttgttgaag atgacgccct tgatcgcgac gtcggggcgg aagcgggcga
     5641 agccggcgac cacggcggcc gccgaggccg acatgccgcg cgcgtccacc accagcacca
     5701 ccggccagcc ggtcagcgcc gccacgtcgg cggtggagcc ggcgtgctcg ccggacgcca
     5761 cggcggcgcc gtcgaacagg cccatgacgc cctcgcacac caccagctcg gcgccgtggg
     5821 acaggcccgc caccagaccg gccagggtgg ccggccgcat ggcccaggca tccaggttgg
     5881 gacagggccg cccggtggcg gcggcgtgga aggcggggtc gatgtagtcg gggccgacct
     5941 tggccgaggc cacgtccacg ccccgccgca ccagatgggc cagcaggccc agcgtcgcca
     6001 gggtcttgcc gctgcccgac gagggcgcgg ccagcacgat ccccggcgcc gccatctatt
     6061 tcaggtgctt cttgagcccc gccgccacct cgtcggccga ggtgccgtgc gggaaatggg
     6121 ccaggaactt gccgtcgggg cccatcaggt aaaggatcga cgaatggtcc atggtgtagg
     6181 cctggggatc gtcgctttta accttggcgg cgtagacctt gtaggccttc agcaccggcg
     6241 ccagttgctc gggcgtgccg gtcatgccga tcagatcggg gtggaaggcg ccgacgtaat
     6301 ccttgagcac cgccgggcgg tcgcgctcgg gatcgaccga gatgaagatc ggcgccacca
     6361 gccggcggtc gccgggcgac agcttgtcca gcgccgccgc cgtcaccccc agcgaagtcg
     6421 ggcagacgtc ggggcagaag gtgtagccga aatagatcag catgaagcgg ccgcgaaagt
     6481 cggcatcgct ggccgtcttg ccgtcgtggt cggtcagggt gaacggcccg ccgatcgagg
     6541 cggtgccggc cccgccatga tcgccgcccg accacaccag catgcgggcg ccgaccgcca
     6601 cggccagcac cacgatcagc gcgatgatgg ccaccagggg cgttctgttg ggcttcttgg
     6661 ccatgcctat ccctttccta agccagcatc tgcaaggcca tgaagcccag catgacggcg
     6721 ttgaccacca gcagcaacgg cgcccatttg agcaccggct gacgccaccg tcccaccgcg
     6781 aaatggccga ccacaccaac ggcgaacagc gccggcacgg tgcctatggc gaaggccagc
     6841 atgcccagcg cgccggccag cggatcgccc gaggccgccg ccgccgccag g
//
LOCUS       DATIKR010000378         3149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_53816, whole genome shotgun sequence.
ACCESSION   DATIKR010000378 DATIKR010000000
VERSION     DATIKR010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53816"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..473)
                     /locus_tag="VLL76_06040"
     CDS             complement(24..473)
                     /locus_tag="VLL76_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013953360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV29096.1"
                     /translation="MDKKLYLEDIHPGQVFGSPRYLVTAEEIVDFAGQWDPQVFHLDG
                     DAARDTFFEGLAASGWHTGAITMRLLVTGEFQPAGGIIGAGIEELKWFRPVRPDDVLS
                     IRTEILESRPMKSKPGFGLCRVKVTTLDGQGEPVQAFTSPLVVPMRP"
     gene            complement(505..>3149)
                     /gene="acnA"
                     /locus_tag="VLL76_06045"
     CDS             complement(505..>3149)
                     /gene="acnA"
                     /locus_tag="VLL76_06045"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HSV29097.1"
                     /translation="ARRRLTIGDRSLDYFALDAVKAHGLGDPATLPFCLKVLLENLLR
                     NLDGVTTTEEDVGCLMKWLDKRSSAHEVPFRPVRVLMQDFTGVPALVDLAAMRQAVAA
                     KGGDPAIIAPLAPVDLVVDHSVAADFFGTSDALKQNLDLEFARNGERYAFLKWAQQAL
                     GNVRIFPPNTGICHQIDLEYISRVVWTQGDVATFDTVVGTDSHTPMVNGLSVLAWGVG
                     GIEAEAAMLGQPISLVIPQVIGFRLKGRLPEGSTSTDLVLTITEQLRHYGVVGRFVEF
                     FGDGLDQLPLADRATIGNMSPEYGATCAIFPIDAETLRYLAFTGREPEHVKLVEAYAK
                     AQGAWRDASTPEPAFTDVIELDLAQVVPSIAGPKRPQDRVPLDEAAVRFGDYLKASVP
                     EPGKQIEVGDHGLRHGDVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLSAKPWVKT
                     SLAPGSPVVTAYFQKSGLDKDLEALGFHTVGYGCTTCIGNSGPLPEAIGKAVEDGNLT
                     VCSVLSGNRNFEGRINPHVRANWLASPPLVVAYALAGSLNVDVAKGALGKGADGADIT
                     LADIWPSSEEVRQAVDANVTPEMFADKYGHILDGPEEWRSVTPSGGATYGWEKDSTYI
                     RLPPYFIEMAQEPDTSNDIIAARPLAILGDSVTTDHISPAGNIKRDTPAGRYLTENGV
                     AVADFNSYGARRGNHEVMVRGTFANIRIKNEMVKGIEGGMTRLQPAGDIMPIYDAAML
                     YAQQKVPLVVVAGKEYGSGSSRDWAAKGTKLLGVKAVIAESYERIHRSNLVGMGVLPL
                     EFPDGVDRKTLGLDGSETFDILGLAGGYKPHMQVSVRVARQGWTVKTFQARVRIDTID
                     EVEYVRHGGILPFMLRQLMARRTG"
BASE COUNT          492 a         1041 c         1086 g          530 t
ORIGIN      
        1 tatgcacggg catggtagcg cgttcagggc cgcatgggta ccactaatgg tgaggtgaac
       61 gcctgcaccg gctcgccctg tccgtccagg gtggtgacct tgactcggca caggccgaag
      121 ccgggcttcg acttcatcgg ccggctctca aggatctcgg tgcggatcga cagcacatcg
      181 tcgggccgca ccgggcggaa ccatttcagc tcctcgatgc cggcgccgat gatgccgccc
      241 gccggctgga actcgccggt gaccagcagg cgcatggtga tggcgccggt gtgccagccg
      301 ctggcggcaa ggccctcgaa aaaggtgtcg cgggcggcgt cgccgtccag gtggaacacc
      361 tgtgggtccc actggccggc gaaatccacg atctcctcgg cggtgaccag gtaacgcggc
      421 gacccgaaca cctgccccgg gtggatgtct tcgagataaa gcttcttgtc catgccccaa
      481 gtgaagcccg ccggcggccc gccgtcaacc cgtgcggcgg gccatcaact ggcgcagcat
      541 gaacggcagg atgccgccat ggcgcacgta ttccacctcg tcgatggtgt cgatacggac
      601 gcgggcctgg aaggtcttga ccgtccagcc ctggcgcgcc acccgcacgc tgacctgcat
      661 gtgcggcttg tagccgcccg ccagccccag gatgtcgaag gtctcgctgc cgtcgaggcc
      721 cagggtcttg cggtcgacgc cgtcggggaa ttccagcggc agcacgccca tgcccaccag
      781 gttcgagcgg tggatgcgct cgtagctttc ggcgatcacc gccttgacgc ccagcagctt
      841 tgtgcccttg gccgcccagt cgcgcgacga gcccgagccg tattccttgc ccgccaccac
      901 caccagcgga accttctgct gggcatagag catggcggcg tcgtagatgg gcatgatgtc
      961 gccggccggc tgcaaccggg tcatgccgcc ctcgatgccc ttcaccatct cgttcttgat
     1021 gcggatgttg gcgaaggtgc cgcgcaccat gacctcgtgg ttgccgcgcc gggcgccata
     1081 gctgttgaag tcggccaccg ccaccccgtt ctcggtcaga tagcggccgg cgggggtgtc
     1141 gcgcttgatg ttgccggcgg ggctgatgtg gtcggtggtc acggaatcgc ccaggatcgc
     1201 cagcggccgc gccgcgatga tgtcgttgga cgtgtccggc tcttgcgcca tctcgatgaa
     1261 atagggcggc aggcggatgt aggtggaatc cttctcccag ccataggtcg ccccgcccga
     1321 gggcgtcacg ctgcgccact cctcggggcc gtcgaggatg tggccgtatt tgtcggcgaa
     1381 catctcgggg gtgacgttgg cgtcgaccgc ctggcggacc tcctcggaac tgggccagat
     1441 gtcggccagg gtgatgtcgg cgccgtccgc ccccttgccc agcgcgccct tggccacgtc
     1501 cacgttcagc gagccggcca gggcataggc caccaccagc ggcggcgagg ccagccagtt
     1561 ggcgcgcaca tgcggattga tgcggccctc gaagttgcga ttgcccgaca gcaccgagca
     1621 gacggtcaga ttgccgtcct ccaccgcctt gccgatggcc tcgggcagcg ggccggaatt
     1681 gccgatgcag gtggtgcagc catagcccac cgtgtggaat cccagggcct ccaaatcctt
     1741 gtcgaggccg gatttctgga aataggccgt caccaccggc gagcccggcg ccagcgaggt
     1801 cttgacccac ggcttggccg acagcccctt ctcgcgcgcc ttccgcgcca gcaacccggc
     1861 cgccatcatc accgacgggt tggacgtgtt ggtgcaggac gtgatggcgg cgatcaccac
     1921 gtcgccgtgg cgaaggccgt ggtcgccgac ctcgatctgc ttgcccggct cgggcacgct
     1981 ggctttcagg taatcgccga agcggacggc cgcctcgtcc agtggcaccc ggtcctgcgg
     2041 ccgcttgggg ccggcgatgc tgggcaccac ctgcgccaaa tccagttcga tgacgtcggt
     2101 gaaggccggt tcgggggtgg atgcgtcgcg ccaggcgcct tgcgccttgg cataggcctc
     2161 gaccagcttc acgtgctcgg gctcgcggcc ggtgaaggcc aggtagcgca gggtctcggc
     2221 gtcgatgggg aagatggcgc aggtggcgcc gtattccggg ctcatgttgc cgatggtagc
     2281 gcggtcggcc agcggcaatt ggtcgaggcc gtcgccgaag aattcgacga agcgcccgac
     2341 cacgccgtaa tggcgcaatt gctcggtgat ggtcagcacc aggtcggtgg aggtcgaacc
     2401 ctcgggcagc cggcccttga ggcggaagcc gatgacctgg gggatgacca gcgagatcgg
     2461 ctggcccagc atggccgcct cggcctcgat gccgccgacg ccccaggcca gcacagacag
     2521 gccgttgacc atgggggtgt gcgaatcggt gcccaccacg gtgtcgaagg tggcaacgtc
     2581 gccttgggtc cataccaccc ggctgatgta ttccaggtcg atctggtggc agatgccggt
     2641 gttgggcggg aagatgcgga cgttgcccag cgcctgctgc gcccatttca ggaaggcgta
     2701 gcgctcgccg ttgcgggcga attccaggtc caaattctgc ttcagggcgt cggacgtacc
     2761 gaagaagtcg gccgccacgg aatggtccac caccagatcg acgggggcca gcggcgcgat
     2821 gattgccggg tcgccgccct tggccgcaac cgcctggcgc atggcggcga gatccaccaa
     2881 ggcgggaacg ccggtgaagt cctgcatcag cacccgcacc ggccggaacg gcacctcgtg
     2941 cgccgacgag cgcttgtcga gccatttcat caggcagccg acgtcctctt cggtcgtggt
     3001 cacgccgtcg aggttgcgca gaaggttttc cagcaggacc ttgagacaga acggcagcgt
     3061 cgcgggatcg cccaatccgt gcgccttgac ggcgtcgagg gcgaaatagt ccaggctgcg
     3121 gtcgccaatg gtgagccggc ggcgggcat
//
LOCUS       DATIKR010000379         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175374, whole genome shotgun sequence.
ACCESSION   DATIKR010000379 DATIKR010000000
VERSION     DATIKR010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175374"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VLL76_06050"
     CDS             <1..651
                     /locus_tag="VLL76_06050"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HSV29098.1"
                     /translation="GTSLFRYARGGDYHDLFVPPGDGLGRMAVAVGDVAGHDLQSAKL
                     MGLARDFLRTRPALPGALGEMIGAVNRDLIGHMKAGRFMTLFLAVLVAETRSIHWVNA
                     GQGAAIAYSPETDSFREVSGPDIPLGIDPDWQFHELSHTGWSTGALLAVGTDGVWETR
                     DASGEMYGTERLCRALRQACARPAAEIVAAVTADLAAFRGARPQEDDLTLVVVKAV"
     gene            complement(857..>1658)
                     /locus_tag="VLL76_06055"
     CDS             complement(857..>1658)
                     /locus_tag="VLL76_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019627607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29099.1"
                     /translation="QASNLEETAASMEELAATVRQNSGNAQQANQLAAGAREIAAGGG
                     QVVGEAVNAMSRIEASSQKIEDIVGMIDEIAFQTNLLALNAAVEAARAGDAGKGFAVV
                     AQEVRNLAQRSAQASKEIKTLIGESSAQVRTGADLVKGAGKTLEEILGSVKRVADIVA
                     EIAAASAEQASGIDQVNAAVTQMDEMTQQNAALVEESAAAAHSLEEQARELNRLMGFF
                     HTGQTRVETAPVERAKPAPRPAAKPRAPAAPAPAVAAKKHAEEDWAEF"
BASE COUNT          219 a          559 c          579 g          301 t
ORIGIN      
        1 ggaacctcgc tgttccgcta tgcccgtggc ggcgactacc acgatttgtt cgtgccgccg
       61 ggcgacgggc tgggccgcat ggcggtggcg gtcggcgacg ttgccggcca cgacctgcaa
      121 tcggcgaaac tgatgggatt ggcgcgagat ttcctgcgca cgcggccggc gcttcccggt
      181 gctttggggg aaatgatcgg cgccgtcaac cgcgacctga tcgggcacat gaaggcgggg
      241 cggttcatga ccttgttcct ggccgtgctg gtggccgaga cccgcagcat ccactgggtc
      301 aacgcggggc agggggcggc catcgcctat tcccccgaaa ccgacagctt ccgcgaggtg
      361 agcggccccg acatccccct gggcatcgac cccgactggc agttccatga actcagccat
      421 accggctggt ccaccggggc actgctggcg gtcggcaccg acggcgtgtg ggagacccgc
      481 gacgccagcg gcgaaatgta tggaaccgag cggctgtgcc gggcgttgcg gcaggcctgc
      541 gcccgcccgg cggccgagat cgtcgcggcg gtgaccgccg acttggccgc cttccggggc
      601 gcgcggcccc aggaagacga cctgaccctg gtggttgtga aggcggtgtg atgccttaac
      661 aggctgcgga aaaacccggg tttgaagttt ccgagcctct gcccgtcatg cccggacttg
      721 atccgggcat ccacgcgtat caacctaagc ccttgtttct aagcgagttt cctgcggcgc
      781 cgcgtggatg gccgggtcaa agcccggcca tgacggaaaa gggcacaatg cgccgtttga
      841 tgagttccgc agcccgttaa aactccgccc aatcctcctc ggcatgcttc ttggccgcga
      901 ccgccggggc gggggcggca ggcgcccggg gcttggcggc cgggcggggg gcgggcttgg
      961 cgcgttcgac gggggccgtt tccacgcggg tctgcccggt gtggaagaaa cccatcaggc
     1021 ggttgagttc gcgcgcctgc tcctccagcg agtgcgcggc ggcggcggat tcctcgacca
     1081 gcgccgcgtt ctgctgggtc atctcgtcca tctgggtgac ggcggcgttg acctggtcga
     1141 tgccgctagc ctgctcggcg ctggcggcgg cgatttcggc gacgatgtcg gcgacccttt
     1201 tcacgctgcc caggatctcc tccagcgtct tgccggcgcc cttgaccaga tcggcgccgg
     1261 tgcgcacctg ggccgaggat tcgccgatca gcgtcttgat ctccttcgac gcctgggccg
     1321 agcgttgcgc caggttgcgc acttcttggg ccacgacggc gaagcccttg cctgcgtcgc
     1381 cggcgcgcgc ggcttccacc gccgcattca acgccagcag gttggtctgg aaggcgatct
     1441 cgtcgatcat gccgacgatg tcctcgatct tctggctgct ggcctcgatg cggctcatgg
     1501 cgttgaccgc ctcgcccacc acctggccgc cgccggccgc gatctcgcgg gcgccggccg
     1561 ccaattggtt ggcctgctgg gcattgccgg aattctggcg cacggtggcg gccagttctt
     1621 ccatgctggc ggccgtctct tccaggttcg acgcctgc
//
LOCUS       DATIKR010000380         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_139352, whole genome shotgun sequence.
ACCESSION   DATIKR010000380 DATIKR010000000
VERSION     DATIKR010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139352"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1468
                     /locus_tag="VLL76_06060"
     CDS             <1..1468
                     /locus_tag="VLL76_06060"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSV29100.1"
                     /translation="VRAAFTQFGGNLEAGWTPRDTLLALGYEYNKTEDALFAGASMDA
                     PLDETDTLRLKFEKRNLDAGALTALRANAYGTMLDHVMDNFSLRAAPASRMIVESESD
                     TYGGQAAADFKAGGSTVTLGLDVQVNNRDARRYQKTGSAVGIIDPSNLESVTWPDVTI
                     GQYGVFGEGTLPVAADSRVKLGARYDRVEVDYGAADLGTSKNTGTYRTANQLYAGYYG
                     TPAGDREENNVGGLARYEHDIGASTLFAGVSRSVRTADTTERGIAHKAMGTNKAWVGN
                     PNIDPEAHHQLDLGVSTASKSWTAGASAFYDRVKDFILRDTARGQAGIMKTDQATIYR
                     NVDAMLTGFELDGSYRFAGNWKVAADAAYTYAENLDENSPIAQIAPLNGKVSLAYAPE
                     GWTLGTRMRWAATQTRVDNFTGSGSGQDAAKTPGHAVFDLFGSYTLVDGVAVDAGITN
                     LFDHAYAEHLNRSASFDNTVTQVYEPGRSFYLRARAEF"
     gene            complement(1469..>2270)
                     /locus_tag="VLL76_06065"
     CDS             complement(1469..>2270)
                     /locus_tag="VLL76_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004187588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HSV29101.1"
                     /translation="DRSPTGWFSPEAARHIDMAEFECDPSALHFGFASWNDFFIRRFK
                     PGARPVAAPGDPAVVVSACEAFPYNIQTGARYRDQFWLKTQPYSLVDIFTAARADLAQ
                     RFVGGIVYQAFLSATNYHRWHAPVAGRVVAAYNVPGTYYAEAASAGLDPAGPDNSQGY
                     ITAVATRAVIVIDTGVQGLGQVACVFVGMAEISSCVIAVETGQMLGKGDEIGWFQYGG
                     STHCLIFEPGVELSFVPQAPFNAPATPVVRVNAALATVGPRLDGGGLA"
BASE COUNT          417 a          818 c          728 g          307 t
ORIGIN      
        1 ggtccgcgcc gccttcaccc agttcggcgg caatctggaa gccggctgga ccccgcgcga
       61 caccctgctg gccctgggct acgaatacaa caagaccgag gacgcgctgt tcgccggcgc
      121 cagcatggac gcgccgctgg acgagaccga cacccttcgc ctgaagttcg agaagcgcaa
      181 cctggatgcc ggcgcgctga ccgcgctgcg cgccaacgcc tacggcacca tgctcgacca
      241 cgtcatggac aatttctcac tgcgcgccgc cccggccagc cggatgatcg tggaatcgga
      301 gtccgacacc tatggcggcc aggcggctgc cgatttcaag gcgggcggct cgaccgtcac
      361 cctgggcctc gacgtccagg tcaacaaccg cgacgcccgg cgttaccaga agaccggcag
      421 cgcggtcggc atcatcgatc cgtcgaacct ggaatcggtg acctggcccg acgtcaccat
      481 cggccaatac ggcgtgttcg gcgagggcac cctgccggtc gccgccgatt cccgcgtgaa
      541 gctgggcgcg cgctatgacc gcgtcgaggt ggattacggc gccgccgacc tggggaccag
      601 caagaacacc ggcacctacc gcaccgccaa ccagctctat gccggctatt acggcacgcc
      661 ggcgggcgac cgcgaggaaa acaatgtcgg tggcctggcg cgctatgagc acgacatcgg
      721 cgcctcgacc ctgttcgccg gcgtcagccg cagcgtgcgc accgccgaca ccaccgagcg
      781 cggcatcgcc cacaaggcca tgggcaccaa caaggcctgg gtcggcaacc ccaacatcga
      841 ccccgaggca catcaccaac tcgatctggg cgtctccacc gccagcaaga gctggacggc
      901 gggcgcgtcg gccttctacg accgggtgaa ggatttcatc ctgcgcgaca ccgcgcgcgg
      961 ccaggccggc atcatgaaga ccgatcaggc caccatctac cgcaacgtcg atgccatgct
     1021 gaccggcttc gaactggacg gcagctaccg cttcgccggc aattggaagg tggcggccga
     1081 cgccgcctat acctatgccg agaacctgga tgaaaactcg cccatcgccc agatcgcgcc
     1141 attgaacggc aaggtcagcc tggcctacgc ccccgagggc tggaccctgg gcacccgcat
     1201 gcgctgggcc gccacccaga cccgggtcga caacttcacc ggcagcggca gcggccagga
     1261 cgcggccaag accccgggcc acgcggtgtt cgacctgttc gggtcctaca ccctggtgga
     1321 cggcgtcgcg gtggacgccg gaatcaccaa cctgttcgac cacgcctatg ccgagcacct
     1381 gaaccggtcg gcatccttcg acaacacggt gacccaggtc tacgaacccg gccgctcgtt
     1441 ctatctcagg gcgcgcgccg agttctgatc aggcaaggcc cccgccatcc aggcgggggc
     1501 caaccgtcgc caatgcggcg ttcacccgca ccaccggcgt ggccggcgcg ttgaacggcg
     1561 cctgcggcac gaaggacagt tccactcccg gctcgaagat caggcagtgg gtcgaaccgc
     1621 catattggaa ccagccgatc tcgtcgccct tgcccagcat ctggccggtc tcgaccgcga
     1681 tgacgcagga cgaaatctcg gccatgccga cgaacacgca ggcgacctgg cccaagccct
     1741 ggacgccggt gtcgatcacg atcaccgccc gcgtcgccac cgcggtgatg tagccctggg
     1801 aattgtccgg cccggcggga tcgagaccgg ccgaagccgc ctcggcgtaa taggtccccg
     1861 gcacgttgta ggccgccacc acccgccccg ccaccggcgc gtgccagcgg tggtaattgg
     1921 tggccgacag gaaggcctgg tagacaatgc cgccgacgaa gcgttgcgcc aggtcggccc
     1981 gcgcggccgt gaaaatgtcc accagcgagt agggctgggt cttaagccag aactggtcgc
     2041 ggtaccgggc gcccgtctgg atgttgtagg gaaaagcctc gcaggcgctg accaccacgg
     2101 ccgggtcgcc gggtgccgcc actggccggg cgccgggctt gaagcgccgg atgaagaagt
     2161 cgttccacga cgcgaagccg aaatgaagcg ccgacgggtc gcactcgaat tccgccatgt
     2221 cgatgtggcg cgccgcctcg ggcgagaacc agccggtggg cgaacggtcg
//
LOCUS       DATIKR010000381         1826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_199209, whole genome shotgun sequence.
ACCESSION   DATIKR010000381 DATIKR010000000
VERSION     DATIKR010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199209"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VLL76_06070"
     CDS             complement(<1..941)
                     /locus_tag="VLL76_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV29102.1"
                     /translation="MPKRERGICELYQDDPERADRLVFGRVAEGRRGFLRGAGLAALG
                     AVVGGAIPFHRNMPAGLIPAALAEETKPFTIQGKDGLVVLNDRPINAETPAHLLDESI
                     TPNNRHFVRNNGGVPEMAAKMDARGWKMVVDGEVGQPLTLTLDDLKGKFKPVTLALQL
                     ECAGNGRAGFNPPASGNQWTVGAIGNSRWTGVPLRDILRAAGIKDTAKYTGHYGLDPH
                     LSGDPNKVPISRGLPIGKAMDPHTIVAFAMNGEPIPALNGFPVRIVAPGYPGSTSQKW
                     LSRIWVRDQVHDGEKMKGQSYRVPAYPVEPGAKVPDQ"
     gene            complement(1045..>1826)
                     /locus_tag="VLL76_06075"
     CDS             complement(1045..>1826)
                     /locus_tag="VLL76_06075"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV29103.1"
                     /translation="FFGTANKLLVRVAVRADEGPAGETAKFVVFDFRRVTGIDSSAAM
                     SFAKLRQFAEKRGLMLLFAHVPGDVGLLLSQAGFAGAEGATWRMVPDLDHALEWCEDS
                     MLDALAAERGEVPGFVAEFRQHVSDQGQTARLLAYFQRLEVPADAVLIHQGDPADDLF
                     ILESGRVTVWIVGEGGERVRLRTMLAGTVVGEMGLYLNDVRSASVSTDEACVAYRLTA
                     EALTRMQQDDPDVAAAFHALMARRLAERLRHTDQMVKVLTD"
BASE COUNT          272 a          630 c          635 g          289 t
ORIGIN      
        1 tcctggtcgg gcacctttgc ccccggctcg accgggtagg cgggaacccg ataagactgg
       61 cccttcatct tctcgccgtc gtggacctgg tcgcgcaccc agatgcggct cagccatttc
      121 tgcgaggtcg aaccggggta gcccggcgcc acgatgcgga ccgggaagcc gttgagcgcc
      181 gggatcggct cgccgttcat ggcgaaggcg acgatggtgt gcgggtccat ggccttgccg
      241 atcggcagcc cgcgcgagat cggcaccttg ttggggtcgc ccgacagatg cgggtccagg
      301 ccgtaatggc cggtatactt ggccgtgtcc ttgatgccgg cggcccgcag gatgtcgcgc
      361 agcggcactc cggtccagcg cgagttgccg atggcgccga cggtccattg gttgccgctg
      421 gccggcgggt tgaagccggc gcggccgttg ccggcgcatt ccagttgcag cgccagcgtc
      481 accggcttga acttgccctt gaggtcgtcg agcgtcagcg tcagcggctg gccgacctcg
      541 ccgtcgacca ccatcttcca gccgcgcgcg tccatcttcg ccgccatttc cggcacgccg
      601 ccgttgttgc gcacgaaatg acggttgttg ggggtgatgg attcgtcgag caggtgggcc
      661 ggcgtttcgg cattgatcgg gcggtcgttg agcaccacca gaccgtcctt gccctggatg
      721 gtgaacggct tggtctcttc cgccagcgcc gccgggatca ggccggcggg catgttgcgg
      781 tggaacggga tggcgccgcc gactaccgcg ccgagggcgg ccaggccggc gcccctgagg
      841 aagccgcgcc gtccctcggc gacgcggccg aacaccagcc ggtcggcccg ctcgggatca
      901 tcctggtaaa gctcgcaaat gccgcgctcg cgcttgggca tgccacaccc tccccggatc
      961 gccatgggcg cgaagcaagg cgcgccattc atccggcagg tgggggcgcg ggtatgcctt
     1021 ggcacgacgc gaagacgggt taccctagtc ggtcaacacc ttgaccatct ggtcggtgtg
     1081 ccgcaaccgc tcggccagcc ggcgcgccat caaggcatgg aaggcggcgg cgacgtccgg
     1141 atcgtcctgc tgcatgcggg tgagcgcctc ggccgtcagg cggtaggcga cgcaggcttc
     1201 gtcggtgctg accgaggccg agcgcacgtc gttgaggtat agccccatct cgccgaccac
     1261 cgtgccggcg agcatggtgc gcaggcggac gcgctcgccc ccctctccca cgatccacac
     1321 cgtgacccgg ccgctttcca ggatgaacag gtcgtcggcc gggtcgccct ggtggatcag
     1381 gacggcatcg gccggcacct ccaggcgctg gaaataggcc agcaggcgcg cggtctggcc
     1441 ctggtccgac acatgttggc gaaattccgc gacgaagccg ggcacctcgc cgcgttccgc
     1501 cgccagcgcg tcgagcatgc tgtcctcgca ccattccaac gcatggtcga gatcgggcac
     1561 catccgccag gtcgccccct cggcgccggc gaaaccggcc tgcgacagca acagcccgac
     1621 gtcgccgggc acgtgggcga acagcagcat caagccgcgc ttctcggcga actggcgcag
     1681 cttggcgaaa ctcatggcgg ccgaggaatc gatgccggtg actcggcgga aatcgaacac
     1741 cacgaacttg gcggtctcgc cggccggccc ctcgtcggcg cggacggcga cccggaccag
     1801 cagcttgttg gcggtgccga agaaca
//
LOCUS       DATIKR010000382         2219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_199212, whole genome shotgun sequence.
ACCESSION   DATIKR010000382 DATIKR010000000
VERSION     DATIKR010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199212"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..424)
                     /locus_tag="VLL76_06080"
     CDS             complement(50..424)
                     /locus_tag="VLL76_06080"
                     /inference="COORDINATES: protein motif:HMM:NF014687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HSV29104.1"
                     /translation="MEQSPADTKSLADDRTVLANERTYAAWVRTGIAAMVSGLAVERL
                     QADLMPGWAINAISAALVVFSIIAFGVGTLRYHHMSAKLHGVASHPLPVQMMMIVTVL
                     LTLAAAMSLLAIFWFHPWTGQG"
     gene            complement(405..1298)
                     /locus_tag="VLL76_06085"
     CDS             complement(405..1298)
                     /locus_tag="VLL76_06085"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29105.1"
                     /translation="MTTAIALLALLVLLALALPPGLRRLFRPARTPGPCPTDLGLDAH
                     DVAIPTERGKRLAAWYLPPASLPGPVVAVMHGWGSSAAELLPLAVPLKQAGYGVLLLD
                     ARCHGRSDDDDFASMPRFAEDLSHALDWLKARPEVASIAVIGHSVGGAAAILTASRRH
                     DLAAVVAVSAFAHPRAMMRRWLKAFRIPYPVAGWWVLRYVERAIGHRYDDIAAINVVH
                     RVACPLLLAHGRDDSQVPATDALAIHAARGTAHVEVLLLDDFGHGDPDRVAGLVPPLL
                     DFLAGTTQPDGSLTRHGAKSG"
     gene            complement(1415..>2219)
                     /locus_tag="VLL76_06090"
     CDS             complement(1415..>2219)
                     /locus_tag="VLL76_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HSV29106.1"
                     /translation="VWALNADGTALGFLGAMGASDFAGGTVVHINSGLAGLIAAIMVG
                     KRSGVGSENMAPHNLVLTMVGGALLWVGWFGFNAGSALTAGGLAGVAMINTQIATGAA
                     VVSWTLAEWIIRGKPSLLGAVSGAVAGLVVITPACGFVAPSGALVMGLIAGPACYWGV
                     SGLKHMFGYDDALDAFGVHGVGGILGAILTGVFAVSSIGGEGKSGLIDGNAGQVLVQL
                     EGVLITIVWCGVVSIVLLKVIDMVMGLRVSKEVETEGLDLALHGETIHS"
BASE COUNT          391 a          747 c          795 g          286 t
ORIGIN      
        1 gtggtccgaa aaatgacacg ggacagggcg atcgtgggtc gaaaaccctt cagccctggc
       61 cggtccaggg gtggaaccag aagatcgcca gcagcgacat ggccgccgcc agcgtcagca
      121 ggacggtgac gatcatcatc atctgcaccg gcagcggatg gctggcgacg ccgtgcagct
      181 tcgccgacat gtggtgatag cgcagggtgc cgacgccgaa ggcgatgatg ctgaacacga
      241 ccagggcggc cgatatggcg ttgatggccc aaccgggcat caaatccgcc tgcaaccttt
      301 ccaccgccag ccccgacacc atggccgcga tgccggtgcg cacccaggcc gcataggtgc
      361 gttcgttggc aagcacggtg cggtcgtcgg caaggctttt ggtgtcagcc ggactttgct
      421 ccatgccggg tcaacgaacc atcgggttgc gtggttccgg ccagaaagtc cagcaagggc
      481 ggcaccagtc cggcgacgcg gtccgggtcg ccatggccga aatcgtcgag cagcagcacc
      541 tcgacatggg ccgtgccgcg cgccgcgtgg atcgccaggg cgtcagtggc cggcacctgg
      601 gaatcatcgc ggccatgggc cagcagcagc gggcaggcaa cgcgatggac cacgttgatg
      661 gcggcgatgt cgtcgtagcg gtggccgatg gcgcgctcga catagcgcag cacccaccag
      721 ccggcgacgg ggtaggggat gcggaaggcc ttcagccagc gccgcatcat ggcgcgcgga
      781 tgggcgaagg ccgacacggc gaccaccgcc gcaaggtcat ggcggcgcga cgcggtcagg
      841 atggcggcgg cgccgccgac cgaatggccg atgacggcga tggatgcgac ctcggggcgc
      901 gccttcagcc aatccagcgc atgggacagg tcctcggcga agcggggcat cgaggcgaag
      961 tcgtcgtcgt cgctgcggcc gtggcagcgg gcgtccagca gcagcacgcc gtatcccgcc
     1021 tgtttcagcg gcaccgccag tggcagcagc tcggcggccg aactgcccca gccatgcatc
     1081 accgccacca ctgggccggg gaggctcgcg ggcggcagat accaggcggc caggcgcttg
     1141 ccgcgctcgg tggggatggc gacgtcgtgg gcgtcgaggc cgaggtcggt ggggcacggc
     1201 cccggcgtgc gcgccgggcg gaacagccgg cgcaggccgg gcggcagcgc cagggccagc
     1261 agcaccaaaa gggcgaggag ggcgatcgcg gtggtcatcg ccgattgaga tgcgccgtcg
     1321 ggcggcgcgg cgcaagcctg aaacgaagaa cgccggacct ttcgatccgg cgctccccac
     1381 ggtatggcca ggtttggtat ggcctttttt atctctagct gtggatggtc tcgccgtgca
     1441 gggcgaggtc caggccctcg gtctcgactt ccttcgagac gcgcaggccc atcaccatgt
     1501 cgatgacctt cagcagcacg atgctgacca cgccgcacca cacgatggtg atcagcacgc
     1561 cctcgagctg caccagcacc tggccggcat tgccgtcgat cagacccgac ttgccttcgc
     1621 cgccgatgga ggagacggcg aacacgccgg tcaggatggc gcccaggatg ccgcccacgc
     1681 cgtgcacgcc gaaggcgtcg agcgcgtcgt catagccgaa catgtgcttg aggccggaaa
     1741 cgccccaata gcaggccggg ccggcgatca ggcccatgac cagggcgccc gagggggcga
     1801 cgaagccgca ggccggggtg atgacgacca ggccggccac cgcgcccgac accgcgccca
     1861 acagcgacgg cttgccgcgg atgatccatt cggccagggt ccacgacacc acggcggcgc
     1921 cggtggcgat ctgggtgttg atcatggcca cgcccgccag gccgccggcg gtgagcgccg
     1981 aaccggcgtt gaagccgaac cagcccaccc acagcagggc gccgccgacc atggtcagca
     2041 ccagattgtg cggcgccatg ttctcggagc cgacgcccga gcgcttgccc accatgatgg
     2101 cggcgatcag gccggccaga cccgagttga tgtgcaccac ggtgccgccg gcgaagtccg
     2161 aggcacccat ggcgcccagg aagcccaagg cggtgccgtc ggcgttgagc gcccacacc
//
LOCUS       DATIKR010000383         2162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_5768, whole genome shotgun sequence.
ACCESSION   DATIKR010000383 DATIKR010000000
VERSION     DATIKR010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5768"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            295..>2162
                     /locus_tag="VLL76_06095"
     CDS             295..>2162
                     /locus_tag="VLL76_06095"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29107.1"
                     /translation="MSFSDILARISHLKVGHRIAAGFTLVLAIAVVIAVTGVSGLMNA
                     GSLMNQYATESDISVRLGNITTDVGDLRRDLLRFALTGDTAALASAKAGSTRLGKELQ
                     EVRDLEGTEHQGKIDAMIKVFSDYTAMMGRIETLRTKRDALVRDTLDPASQQVRAHLA
                     RIVQATNASSNAETTAVAALTETAFYQSQLAATHFLDDPSPERAKQTRQLVEDFVAKT
                     DELLTYLRDPALRRMASDSVNLAMDYGGAFDQVAAAALETGDLIYRSMPKLGTEFGRL
                     SAEIKSSQEADMVEIKEDTLAGIAGSTRMGVALAIAAMAAGIGLSLVIARGIVVPVKA
                     MTRAMTTLAAGDLTVAVPATDRTDEIGGMGRAVQVFKDNAIAMERMRAEQAETDKRIA
                     DERRKAMLALADDFQGHISAVVAKVKNAASEMERTSRSMATVADSTTQQATAAAAASE
                     EASSNVQTVAAAAEQLTASIVEIGRQVTHANQTAAEAARKAEQTDNIVRTLADAAQQI
                     GVVVSMISDIAGQTNLLALNATIEAARAGEAGKGFAVVAGEVKGLANQTAKATSEIAQ
                     QINQIQAVTRDAVTAIHEISTTVGTISEVSTAIASAVEQQQAATREIARNVEQAAQG"
BASE COUNT          421 a          758 c          669 g          314 t
ORIGIN      
        1 cgtggatgcg cggatcaagt ccgcgcatga cggctatatc aggtggcgat accttgaaaa
       61 atctccgctg ttggcgagcc atccggacca ccaacagcct gcgctgacat gcccttttct
      121 tttccccctc ccgatggcgt acgccgttcc tcatacttct cgacgatttt cagctcccgg
      181 aaaacgacta cgcttctccc cgggacaaag aagtcaccat aaaacagttc taattaaatc
      241 tgtatcgcgc tttggcgtga aagcccggac tctgattctc tggggggatg ccacatgtct
      301 ttctccgata ttctagcgcg aatctcccac ctcaaggtcg gacatcgtat cgccgccggc
      361 ttcacgctgg tgctcgccat cgccgtcgtg atcgccgtca ccggcgtcag cgggctgatg
      421 aacgcgggct cgctgatgaa ccagtacgcc accgagtccg acatctcggt tcgcctgggc
      481 aacatcacca ccgacgtcgg cgatttgcgc cgcgacctgt tgcgatttgc gctgaccggc
      541 gacacggcgg cgttagcctc ggccaaagcg ggctcgacgc gactggggaa agaactgcag
      601 gaagtgcggg acctcgaggg aaccgagcac cagggcaaga tcgacgccat gatcaaggtg
      661 ttcagcgact atacggccat gatggggcgg atcgagacgt tgcggaccaa acgcgacgcc
      721 ttggtgcgcg ataccctgga tccggccagc cagcaggtcc gcgcccacct cgcccgcatc
      781 gtccaggcca ccaacgccag cagcaacgcc gaaaccactg ccgtcgcagc cctgaccgag
      841 accgcgttct atcagtcgca gctggccgcc acccacttcc tcgacgaccc cagccccgag
      901 cgcgccaagc agacccgtca actggtcgag gacttcgtcg ccaagaccga cgagctgctg
      961 acctatctgc gcgacccggc attgcgccgg atggcctcgg actcggtcaa cctggcgatg
     1021 gattacggcg gggccttcga tcaggtggcg gcggcggcgc tggagaccgg cgacctgatc
     1081 tatcgctcca tgcccaagct gggcaccgag ttcggccgcc tcagcgccga gatcaagtcg
     1141 tcgcaggaag cggacatggt cgagatcaag gaggacacgc tggcgggcat cgccgggtcc
     1201 acccggatgg gcgtcgccct ggccatcgcg gcaatggccg ccggaatcgg cctgtcgctg
     1261 gtgatcgccc gcggcatcgt cgtgccggtc aaggccatga ccagagccat gaccaccctg
     1321 gcggccggcg acctgaccgt cgccgtcccc gccaccgacc gcaccgacga gatcggcggc
     1381 atgggccgcg cggtgcaggt gttcaaggac aacgccatcg ccatggaacg catgcgcgcc
     1441 gaacaggccg agaccgacaa gcggatcgcc gacgaacggc gcaaggccat gctggcactg
     1501 gccgacgatt tccagggcca tatcagcgcc gtggtggcca aggtcaagaa tgccgcaagc
     1561 gagatggaaa ggacgtcgcg gtccatggcg accgtcgccg attccaccac ccagcaggcc
     1621 accgccgccg ccgccgcctc ggaggaagcg tcgagcaacg tccagaccgt cgcggctgcc
     1681 gccgagcagt tgaccgcctc gatcgtcgag atcggacgcc aggtcaccca cgccaaccag
     1741 accgccgccg aggccgcccg caaggccgag cagaccgaca acatcgtccg caccctggcc
     1801 gacgccgccc agcagatcgg ggtggtggtc agcatgattt ccgacatcgc cggccagacc
     1861 aacctgctgg ccttgaacgc caccatcgag gccgcgcgtg ccggcgaggc tggcaaggga
     1921 ttcgcggtgg tggcgggcga ggtcaagggg ctggccaacc agacggccaa ggcgacgtcc
     1981 gagatcgccc agcagatcaa ccagatccag gcggtcaccc gcgacgccgt gaccgccatc
     2041 cacgagatca gcaccaccgt cggcaccatc agcgaggtgt ccaccgccat cgcctcggcc
     2101 gtcgagcagc agcaggcggc cacccgcgag atcgcgcgca acgtcgagca ggccgcgcaa
     2161 gg
//
LOCUS       DATIKR010000384         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_42493, whole genome shotgun sequence.
ACCESSION   DATIKR010000384 DATIKR010000000
VERSION     DATIKR010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42493"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1026
                     /locus_tag="VLL76_06100"
     CDS             <1..1026
                     /locus_tag="VLL76_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HSV29108.1"
                     /translation="RSGRPSPRTFTMTFEEKAYDERDAAAAVSRHVGSRHVELPARPQ
                     VSGLLDDMVRKFGEPFGNPTALLIHDLSRKAREHVKVALAGDGGDEVFAGYPRYHGGL
                     LAGRYRRLVPAPLRALAAAGAGLIPESTSGRHGLRRAREFLTSAGLEDAEAYAAWVEY
                     FDPAERQALLDGARPSRPVADLYRAAPSRSPLDAMQQTDLLSFLPGNLLSYVDAMSMA
                     VALEVRLPLLDHRLVEAMGRIAPATRFAAGKKTVLKAVARRLLPAEIVDRPKLGFNPP
                     MGVWLKGELKGLVDERLTAARMAELGLEWAPVRALLAEHQRGRRDHSLKVWALLVLEA
                     WDRQQRA"
     gene            complement(1011..>1623)
                     /locus_tag="VLL76_06105"
     CDS             complement(1011..>1623)
                     /locus_tag="VLL76_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018862238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV29109.1"
                     /translation="IGRFVFVSSIKVNGESTPPDRPFRADDPPAPADSYGIAKAEAEA
                     ALARIPGLGLAVVRPPLVHGPGAKGNLAALMRVIAKGWPLPLGAIVNRRSLVGVENLA
                     DCLAFLAEHGCVGTFLVRDEADVSTPELVRLVAAAMGRPARLVPVPQALLRLAGMVTG
                     KAAAVERVTGSLVVDDAPLRALGWRQRVSLADGIAAMARQARC"
BASE COUNT          236 a          599 c          572 g          216 t
ORIGIN      
        1 cgatccgggc ggcccagccc gcgcaccttc accatgacct tcgaagagaa ggcctatgac
       61 gagcgcgacg cggcggcggc ggtctcccgc catgtcggca gccgccacgt cgaattgccg
      121 gcgcggcccc aggtctcggg cctgctggac gacatggtgc ggaaattcgg cgagccgttc
      181 ggcaacccta ccgcgctgct gatccacgac ctgtcgagga aggcgcgcga gcacgtcaag
      241 gtcgccctgg ccggcgacgg cggcgacgag gtgttcgccg gctatccccg ctatcacggc
      301 ggcctgctgg ccggccgcta ccgccgcctg gtgccggcgc cgctgcgggc gctggccgcc
      361 gccggcgctg gcctgatccc ggaaagcacg tcgggccggc acggcctgcg ccgggcgcgc
      421 gagttcctga cctcggcggg gctggaggat gccgaagcct atgccgcctg ggtggaatat
      481 ttcgatcccg ccgaacgcca ggcgctgctg gacggcgccc ggccgtcgcg ccccgtcgcc
      541 gacctctatc gcgccgcccc cagccggtcg ccgctggacg ccatgcagca gaccgacctg
      601 ctgtcgttcc tgcccggcaa cctgctgtct tatgtcgatg ccatgagcat ggcggtggcg
      661 ctggaggtgc ggctgccgct gctcgaccat cgcctggtcg aggccatggg gcggatcgcg
      721 ccggccactc gtttcgctgc cggcaagaaa acggtgctga aggccgttgc ccgccgcctg
      781 ctaccggccg agatcgtcga tcgccccaag ctgggcttca acccgcccat gggcgtgtgg
      841 ctgaagggcg aattgaaggg attggtggac gaacggctaa ccgccgcccg catggccgaa
      901 ctgggcctgg aatgggcgcc ggtgcgcgcc ttgctggcgg aacaccagcg cggccggcgc
      961 gaccattccc tgaaggtgtg ggccctgctg gtgctggaag cctgggaccg tcagcaacgc
     1021 gcctgacgcg ccatggcggc gatgccgtcg gccaggctca cccgctgccg ccagcccagc
     1081 gcccgcagcg gcgcatcgtc caccaccagc gagccggtca cccgctccac cgccgcggcc
     1141 ttgccggtca ccatcccggc caggcgcaac aaggcctgcg gcaccgggac cagccgcgcc
     1201 ggccggccca tggcggcagc caccagccga acaagttccg gagtcgaaac gtccgcctcg
     1261 tcgcgcacca ggaaggtgcc gacgcaaccg tgctcggcca ggaaggccag gcaatcggcc
     1321 aggttttcca cccccaccag cgagcggcgg ttgacgatgg cgcccagcgg cagcggccag
     1381 cccttggcga tcacgcgcat caaggccgcc agattgccct tggcgcccgg gccatggacc
     1441 agcggcggcc gcaccaccgc caggccgagg ccggggattc gcgccaatgc ggcctcggcc
     1501 tcggccttgg cgatcccata ggaatcggcc ggggccggcg ggtcgtcggc gcggaacgga
     1561 cggtcgggcg gggtggattc gccgttgacc ttgatcgagc tgacgaagac gaaccgcccg
     1621 atg
//
LOCUS       DATIKR010000385         4620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_53881, whole genome shotgun sequence.
ACCESSION   DATIKR010000385 DATIKR010000000
VERSION     DATIKR010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4620
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53881"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..713
                     /locus_tag="VLL76_06110"
     CDS             144..713
                     /locus_tag="VLL76_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HSV29110.1"
                     /translation="MTKGPTGTDNPIVSRRSLLALGLGTAAATLLVSPLEAAVRAMPE
                     RALNLYNTHTGEWLKTVYWANGAYLPRSLAQVNKFLRDHRSGEVHPMDPRLLDLMAAM
                     HRKFGNKGAIHIISGYRAPQTNAILASASDGVAHNSLHMSGKAVDIRIPGAGVKMVGK
                     AAKSLKAGGVGTYPSSNFVHIDTGKVRTW"
     gene            825..1022
                     /locus_tag="VLL76_06115"
     CDS             825..1022
                     /locus_tag="VLL76_06115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29111.1"
                     /translation="MAPQRLAQSDLARRAREKAEMRERDARLLASGEVSREQLSQRNG
                     LFSKLDMKKVRVVGRVSMGRR"
     gene            1019..1579
                     /locus_tag="VLL76_06120"
     CDS             1019..1579
                     /locus_tag="VLL76_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29112.1"
                     /translation="MSEDQNEELSYEDVIAILVAAQGIEATVVGGQAINFWGEYFRDR
                     AKEDLAQFAPFTSKDIDYFGLAAAAQQLADKLGGKAVFPEPEDHTPNSAIVQAEINGR
                     QAKIDFLGGVLGVRPSEMGDGALLIVIDHESAGLNIKVSIRVLHPLLCLKSRAANMIT
                     LRRADDVTKRQYAVRSSFYVNTSFGV"
     gene            complement(1813..2475)
                     /locus_tag="VLL76_06125"
     CDS             complement(1813..2475)
                     /locus_tag="VLL76_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29113.1"
                     /translation="MSKRLLSLLTIILLALHDPAAAREQALDLLDAPVPYTAQFRVAS
                     DRGVYHGTVWHAPGRERREFDTQGGGQALLLRRDTDSAYLMKPGGRWYVGLALSAAAG
                     LAGGLDGMIVKRTRVKDDTVAGIRATQYRVDATAAKGGRFDGDAWFTKDGIMVKAVGT
                     VHTPGGKRMPVETSLSGLKLGAVDERKFELPAGWLGMDLRSVPAERLEQAVESLRPML
                     ER"
     gene            2616..>4620
                     /locus_tag="VLL76_06130"
     CDS             2616..>4620
                     /locus_tag="VLL76_06130"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29114.1"
                     /translation="MIAHSVADQLRLIDRAITALARSTEALLRASDETSLFDDICHIA
                     VDIAGYRLAWVGVARPEDGKPVTPVAQAGMGEAYVSEIRVSWADSVLGRGPIGTAIRS
                     GLTQVVTDTETDPRFEPWREAARRYGFRSVISLPLGGAGDGIGALNIYASEPDAFDED
                     TVRLLEDLARNVTYGVRALRMKVEHDRAVRDLAESEERYRSLIELSPDAIIVHSQGTI
                     LFANAASARVFGTDSPLGIVGRPVLDFVHEDSRETVSKRMRKPPVGRQVFDYRLARAD
                     GGDFEAEVVGTNITFHGLPARLLVVRDVTDRKQVQEQLVQAAKLATLGEMAAGLVHEL
                     SQPLNIMRLTAEGALLFIERGKATPDWQAQQFQMIADQAQRTAEIIDDIRIFSRRDTT
                     PVQAFDALAAVRSAIGVLEGQMRPEGIELTLDLPDQPMPVKGRRVQLEQVLMNLVSNA
                     LHAVKEKRDGEGEGWQPRLRVAAHTQGSHVVVTVADNGPGIPTAVRARIFEPFFTTKE
                     AGRGTGLGLSVSFGIVTSMGGRLESVDQPEGACFALTLPLDEDPELAEAPEQPAAPAP
                     AVALEAHIMVVDDETKAAETLAHTLREMGYRVSLCSSGSQAYDLFMADPADVVITDLR
                     MPAGGGEQLVEKLRDFDPLLPIVIVTGHLGATERLADSLQDDRC"
BASE COUNT          831 a         1579 c         1475 g          735 t
ORIGIN      
        1 ctgcccgccg cagccgtcgc acaacaggaa gcccgcggca cgctttgatt cttgccgtgt
       61 cattgcaggg gcaagattcc agacggttga ctcccgcccc tcgcccgatg gtatgaacgg
      121 actctccaaa aggggggaga tccatgacca agggtccgac cggtaccgac aatccgatcg
      181 tctcgcgccg ctcgctgctg gccctgggcc tgggcacggc tgccgcgacc ctgctcgtca
      241 gcccgctcga ggcggccgtc cgcgccatgc ccgagcgcgc cctcaacctc tacaacaccc
      301 ataccggcga gtggctgaag acggtctatt gggccaacgg cgcctatctg ccaaggtcgc
      361 ttgcccaggt gaacaagttc ctgcgcgacc accgctcggg cgaagtccac cccatggacc
      421 cccgcctgct cgacctgatg gccgccatgc accgcaagtt cggcaacaag ggcgccatcc
      481 acatcatctc gggctaccgc gcgccgcaaa ccaacgccat cctggcctcg gccagcgacg
      541 gcgtggcgca caattcgctg cacatgtcgg gcaaggccgt ggacatccgc atccccggcg
      601 ccggcgtcaa gatggtcggc aaggccgcca agtccctgaa ggccggcggc gtcggcacct
      661 acccgtcttc caatttcgtg catatcgaca cgggcaaggt acggacctgg taggtttgct
      721 cccgcttcct ccgcaaaggt gtagctaggc taagtactca gggggctgga acttcccgct
      781 gaagcggctt attattcatt gcagacgcag aaagatccaa actcatggca ccgcagcgcc
      841 tcgctcagtc cgatcttgct cgccgcgctc gcgagaaggc agaaatgcgc gagcgtgacg
      901 cccgtctcct cgcttccgga gaggtttcgc gggaacagct cagccagcgc aacggcctgt
      961 tctcaaagct cgacatgaag aaggtccgcg tggtcggccg ggtgtcgatg ggccgacgtt
     1021 gagcgaagac cagaacgaag aattatcata tgaagacgtt atcgccatcc tggtggcggc
     1081 ccaggggatt gaagcaaccg ttgtcggtgg acaggcgata aatttttggg gtgagtactt
     1141 ccgggacaga gcgaaagaag acctcgctca attcgcccct ttcacatcaa aagacataga
     1201 ctattttggg ttggcggcag ccgcccagca acttgcggac aagcttggcg gcaaggcagt
     1261 cttccccgaa ccggaagacc acaccccaaa cagcgcgatc gtccaggcag agatcaatgg
     1321 gcggcaggca aagattgact tcctcggggg agtgctcggg gtaaggccgt ctgaaatggg
     1381 cgatggcgct cttttaatcg taatcgacca tgaaagcgcc ggattaaaca tcaaagtctc
     1441 catacgcgta ttacaccccc ttctctgcct caaaagccga gcggcaaaca tgatcacgct
     1501 tcgacgtgct gatgacgtca ccaagcgaca gtacgccgtt cgttcatcat tctacgtgaa
     1561 tacatctttt ggagtttaga gagaggcgat cacaaggaag cgagccggac actgaaggat
     1621 ttattcacat ggttgcgagg cgatttgaat gccaagcagc ttcggcatca tgagcttctg
     1681 gcggatccac ggcagatcat cgcctgggtc gcggatgccc ctggctggga taagcggttt
     1741 cgagagcaca acatcgcgac catgctgcag tcgcttaacc ttccgccaac tgccggcgcc
     1801 taacggcggc ccctacctct ccagcatcgg ccgcaggctt tccaccgcct gttccagccg
     1861 ttccgccggc accgagcgca ggtccatgcc cagccagccg gcgggcagtt cgaacttgcg
     1921 ttcgtccacg gcgcccagct tcagccccga cagcgaggtt tccaccggca tgcgcttgcc
     1981 gccgggggtg tgcacggtgc ccaccgcctt gaccatgatg ccgtccttgg tgaaccaggc
     2041 gtcgccgtcg aagcggccgc ccttggcggc ggtggcatcg acgcggtact gggtggcgcg
     2101 gatgccggcg acggtgtcgt ccttgacgcg ggtgcgcttg acgatcatgc cgtccagccc
     2161 gccggccagg ccggcggcgg cgctgagcgc gaggccgacg taccagcggc cgccgggctt
     2221 catcagatag gcggaatcgg tgtcgcggcg cagcagcaat gcctggccgc cgccctgggt
     2281 gtcgaactcg cggcgctcgc gccccggcgc gtgccacacc gtgccgtgat agacgcccct
     2341 gtcgctggcg acgcggaact gcgccgtata gggcaccggc gcgtccagca ggtccagcgc
     2401 ctgctcgcgc gcggcagcgg ggtcgtgaag ggcgagcagg atgatcgtca gcaacgacag
     2461 caggcgtttt gacacggact tttccctcat caggccggac aggcaatgga accatggaaa
     2521 catggcgaca gcggggccgg gtattaatgc gatcgaaccc taggtcgcac tctccagaag
     2581 tattatcatc ctcatagaac ggggaggaag acagcatgat cgcccacagc gtggcggacc
     2641 agcttcgcct gatcgaccgc gccatcacgg ccctggcgcg ctcgaccgag gcgttgctgc
     2701 gggcgtccga cgaaacctcg ttattcgacg acatctgcca catcgccgtg gacatcgccg
     2761 gctatcgcct ggcctgggtc ggcgtggccc ggcccgagga cggcaagccc gtcacccccg
     2821 tggcccaggc cggcatgggc gaagcctacg tcagcgagat ccgtgtgtcg tgggcggatt
     2881 cggtgttggg gcgggggccc atcggcaccg ccatccgctc gggcctcacc caagtcgtca
     2941 ccgacaccga gaccgacccg cgcttcgagc catggcgcga ggcggcgcgc cgctacggct
     3001 tccgttcggt catctcgttg ccgctgggcg gcgccggtga cggcatcggc gccttgaaca
     3061 tctatgccag cgaacccgac gccttcgacg aggacaccgt ccgcctgctg gaagacctgg
     3121 cgcgcaacgt cacctacggc gtgcgcgcgc tgcgcatgaa ggtggagcac gaccgtgccg
     3181 tgcgcgacct ggccgaaagc gaagagcgct accgctcgct gatcgagctc agccccgacg
     3241 ccatcatcgt gcacagccag ggcaccatcc tgttcgccaa cgccgcctcg gcccgggtgt
     3301 tcggcacgga ctcccccttg ggcatcgtcg gacggccggt gctggacttc gtccacgagg
     3361 actcgcgcga gacggtcagc aagcgcatgc gcaagccgcc ggtgggccgc caagtgttcg
     3421 actaccgcct ggcccgcgcc gatggcggcg acttcgaggc cgaggtggtg ggcaccaaca
     3481 tcaccttcca cggcctgccc gcccgcctgc tggtggtgcg cgacgtcacc gaccgcaagc
     3541 aggtgcagga gcagttggtc caggccgcca agctggcgac gctgggcgag atggcggccg
     3601 ggctggtgca cgaattgtcg cagccgctca acatcatgcg cctgaccgcc gagggcgccc
     3661 tgctgttcat cgagcgcggc aaggccacgc ccgactggca ggcccagcaa ttccagatga
     3721 tcgccgacca ggcccagcga accgccgaga tcatcgacga catccgcatc ttctcgcgcc
     3781 gcgacaccac gccggtgcag gcgttcgacg ccctggccgc cgtgcgctcg gccatcggcg
     3841 tgctggaggg ccagatgcgg cccgagggca tcgagctgac gctggacctg cccgaccagc
     3901 ccatgccggt caagggacgg cgggtgcagt tggaacaggt gctgatgaac ctggtgtcca
     3961 acgccctgca cgcggtcaag gagaagcgcg acggcgaggg cgagggctgg cagccccgcc
     4021 tgcgggtcgc cgcccacacc cagggcagcc acgtggtcgt caccgtcgcc gacaacggcc
     4081 ccggcatccc gaccgccgta cgcgcccgca tcttcgagcc gttcttcacc accaaggaag
     4141 ccgggcgcgg caccggcctg ggcctgtcgg tcagcttcgg catcgtcacc tccatgggcg
     4201 gccggctgga atcggtggac cagcccgagg gcgcctgctt cgccctgacc ttgccgctgg
     4261 acgaggatcc cgagctggcc gaagccccgg agcaacccgc cgccccggcg ccggccgtgg
     4321 cgctggaagc ccacatcatg gtggtggacg acgagaccaa ggcggccgag accctggccc
     4381 acaccctgcg cgagatgggc tatcgcgtca gcctgtgttc cagcggttcc caggcctatg
     4441 acctgttcat ggccgacccg gccgacgtgg tcatcaccga cctgcgcatg cccgccggcg
     4501 gcggcgagca actggtggaa aagctgcgcg atttcgaccc gctgttgccc atcgtgatcg
     4561 tcaccggcca cctgggcgcg acggaacgcc tggccgacag cctgcaggac gaccgctgcg
//
LOCUS       DATIKR010000386         1834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66611, whole genome shotgun sequence.
ACCESSION   DATIKR010000386 DATIKR010000000
VERSION     DATIKR010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66611"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VLL76_06135"
     CDS             complement(<1..303)
                     /locus_tag="VLL76_06135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29115.1"
                     /translation="MAALAILAALPAGAAEPVVERASKICQVTGEVDRSTGQPTVNAT
                     ESRFGFWGTDLGASFQHDGKTVFLFGDTHPVKGLERARDRDLVAVSDDREPEDCLSL"
     gene            complement(394..1494)
                     /locus_tag="VLL76_06140"
     CDS             complement(394..1494)
                     /locus_tag="VLL76_06140"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HSV29116.1"
                     /translation="MIRLMAAILLVAAMVRGLAWALPGPDLMDFGSFFASGEAAAKGG
                     NPYGIHPRTFHVVLPGFESWNPNLNPPVSLPAFQLFALIDPHEGFRLWWAASFIGYAG
                     GVLLLLRRYRRPMAALLAFGLAGFWDTLALGQVYVPLVLAAIFAWLLLEKGRGIEAGL
                     LIGLLVAVKPNFLVWPALLLLAGHHRPAVVAIAVAAVSSAVPVFLYGPEIYARWVEAV
                     TADANRAAFLTNASLTGLGARLGSREAGLVAGAVLLAGLAWWAWRRRPDAMAASALGL
                     VGALLASPIAWVHYTLFLLPVFFVLPASPLLVVSAALLVLPVPWVIELLDASAVAKAT
                     FGSVYAWAVILCLAALLMRLLPHRNTKSGQMR"
     gene            complement(1491..>1834)
                     /locus_tag="VLL76_06145"
     CDS             complement(1491..>1834)
                     /locus_tag="VLL76_06145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29117.1"
                     /translation="ATIRNQVLVPNIFARQGQNPLVFTPSLEALNWNAYNPAPRLIDR
                     DDSRRLAAQVAPVADQCDLVDPPILGVYVVGYHVPCYLWPSDLRVRPVWCEPGFSLVE
                     IIPSDVGEAVP"
BASE COUNT          364 a          646 c          609 g          215 t
ORIGIN      
        1 gagcgacagg caatcctcgg gctcgcggtc gtcggacacg gccaccaggt cgcggtcgcg
       61 cgcccgctcc agccccttga ccggatgggt gtcgccgaac aggaacacgg tcttgccgtc
      121 atgctggaac gaggcgccca gatcggtgcc ccagaagccg aagcggcttt cggtggcgtt
      181 gacggtcggt tggccggtgg agcgatccac ctcgccggtc acctggcaga tcttgctggc
      241 gcgctcgacc accggctcgg cggcgccggc gggcaaggcg gcgaggattg cgagggcagc
      301 cactgtcagc gggacgcatg gcgtgcggcg gaaggctcgg gcaatgatcg cttgcatggg
      361 gcaagaccat tgccccaaag ccctaacact ttcttaccgc atttgccccg acttggtatt
      421 tcgatggggt aatagccgca tgagcaaggc ggccagacaa aggatgacgg cccaggcata
      481 gaccgagccg aaagtcgcct tggcgaccgc cgacgcgtcc agcagttcga tcacccacgg
      541 caccggtagc accagcagcg ccgccgagac aaccagcagc ggcgaggccg gaagcacgaa
      601 gaacaccggc agcaggaaca aggtgtaatg cacccaggcg atgggcgacg ccagcagcgc
      661 ccccaccagc cccagcgcgc tggcggccat ggcgtcaggc cgccgccgcc atgcccacca
      721 cgccagcccg gccagcagca ccgcccccgc gaccagcccg gcttcgcgcg aacccagccg
      781 tgcccccagg ccagtcagcg aggcgttggt caggaaggcg gcgcggttgg cgtccgccgt
      841 gaccgcctcg acccagcggg catagatctc ggggccgtaa agaaacaccg gcaccgcgct
      901 cgacaccgct gcgactgcga tcgccaccac ggccggccga tgatgaccgg ccagcagcaa
      961 cagggccggc cacaccagga aattgggctt caccgccacc agcaacccga tcagcaggcc
     1021 ggcctcgatc ccccgcccct tctccagcag cagccaggcg aagatggcgg ccagcaccaa
     1081 aggcacgtag acctgcccca gggccagcgt gtcccaaaac cccgccaagc cgaaggccag
     1141 cagcgcggcc atcggccggc ggtagcggcg caacagcagc agcacgccgc cggcatagcc
     1201 gatgaacgac gccgcccacc acaggcggaa gccttcatgc gggtcgatca gggcgaacaa
     1261 ctggaacgct ggcaacgaca ccggcgggtt gaggttgggg ttccaggatt cgaagcccgg
     1321 cagcaccacg tggaaggtcc gcgggtggat gccatagggg ttgccgcctt tggccgccgc
     1381 ctcgcccgag gcgaagaacg agccgaaatc catcagatcc ggccccggca acgcccaggc
     1441 gaggccccgc accatggccg ccaccagcag aattgcggcc atcaggcgga tcatggcacc
     1501 gcctcgccga catcggacgg gatgatttcg accagcgaga agccaggttc acaccacacc
     1561 ggacggacgc gcaggtcgga cggccacaaa tagcacggca cgtggtagcc gaccacgtag
     1621 acaccgagga tcggcggatc gacgaggtca cactggtccg ccaccggcgc cacctgcgcc
     1681 gccagccgtc gtgaatcgtc gcggtcgatc aggcgaggcg ccgggttgta ggcgttccag
     1741 ttcaacgcct ccagcgacgg cgtgaacacc agcgggttct ggccctggcg ggcgaagatg
     1801 ttgggcacca gcacctgatt gcggatggtg gcgt
//
LOCUS       DATIKR010000387         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_102645, whole genome shotgun sequence.
ACCESSION   DATIKR010000387 DATIKR010000000
VERSION     DATIKR010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102645"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /gene="dapF"
                     /locus_tag="VLL76_06150"
     CDS             complement(<1..735)
                     /gene="dapF"
                     /locus_tag="VLL76_06150"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HSV29118.1"
                     /translation="MTNAGRPFFKMHGLGNDFVVFDARANALTLTPDQVRALSNRRTG
                     IGCDQLIVIEAARKSVSDAWMTIFNPDGTQSGACGNATRCVAWLLMREGGRDKVVIET
                     QAGLLDGEARGPMMVAVDMGRARLDWREIPVAEAVDTLHMNMGVGPLHDPVGVNMGNP
                     HAVFFVDNAEAVDLPALGPVLENHSFFPERANIEIAQVLAPDRIRMRVWERSAGITSA
                     CGSGACATLVAAARRGLTGRKADVVLD"
     gene            complement(777..1589)
                     /locus_tag="VLL76_06155"
     CDS             complement(777..1589)
                     /locus_tag="VLL76_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29119.1"
                     /translation="MDIKLYLKAAAALAVMGTVSFFVFDGLLGRQTDRREPVAAQALV
                     EGGPDYVHGRDAIAAIDTPVTLTRSPVRASPFATSYRITEDVAGRVYKNGVDEDGEIR
                     QAQVAGVWKAPSFVRASRQLPPDTWQPQPIAQPADSARCPAGMTDAPFVGALRFLVGA
                     RPPAALPGPLRSGDTLSGCIEIGRVLPLSIPAPLVTTATVKGMVTHRGRPAMLFVIAG
                     QGPAVESFSGYALADRDTGFVVFSDVEAKFRDPAAHGGYTASVRELARVDLR"
     gene            complement(1592..>2171)
                     /locus_tag="VLL76_06160"
     CDS             complement(1592..>2171)
                     /locus_tag="VLL76_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009146612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HSV29120.1"
                     /translation="SEIRDEPSPRLCYPSTMHVEPRKPHPIENAVERFLFAGRWLLVP
                     LYVGLTLTLLLFTAKFVQELVHVVPMLPAMAEADLILTALALMDLVLVGNLLVMVILS
                     GYESFVSRIEAAKNENLAWLGKLDAGTLKVKVAASIVAISSIHLLKAFMNAQDTPNDK
                     LMWLVIIHLTFVVSALILAWVDKIAFASHREH"
BASE COUNT          346 a          706 c          807 g          312 t
ORIGIN      
        1 gtccagcacc acatcggcct tgcgcccggt caggccgcgc cgggcggcgg ccaccagggt
       61 ggcgcaggcg cccgagccgc aggcgctggt gatgccggcg ctgcgctccc acacccgcat
      121 gcggatgcgg tcgggcgcca gcacctgggc gatctcgatg ttggcgcgct cggggaagaa
      181 ggaatggttt tccagcaccg gccccagggc gggcaggtcc accgcctcgg cgttgtccac
      241 gaagaacacc gcatgcgggt tgcccatgtt gacgcccacc gggtcgtgga gcgggccgac
      301 gcccatgttc atgtgcaggg tgtccaccgc ctcggccacc gggatctcgc gccagtccag
      361 ccgggcgcgg cccatgtcca cggccaccat catggggccg cgcgcctcgc cgtccagcag
      421 gccggcctgg gtctcgatca ccaccttgtc gcggccgcct tcgcgcatca gcagccaggc
      481 gacgcagcgg gtggcgttgc cgcaggcgcc ggattgggtg ccgtcgggat tgaagatggt
      541 catccaggcg tcggacacac ttttgcgcgc cgcctcgatg acgatcaact ggtcgcagcc
      601 gatgccggtg cggcggttgg acagcgcgcg cacctggtcg ggcgtcaggg tgagggcgtt
      661 cgcgcgcgcg tcgaaaacga cgaagtcgtt cccgagcccg tgcatcttga agaaggggcg
      721 gccggcattg gtcatgactg gcgttatatg gggcggggga cgcccgagtc cagcgatcag
      781 cgcaagtcca cgcgggccag ttcgcgcacg ctggcggtgt agccgccatg ggcggcgggg
      841 tcgcggaact tcgcttccac gtccgagaac accacgaagc cggtgtcgcg gtcggccagg
      901 gcatagcccg agaacgactc gacggccggg ccctggccgg cgatgacgaa cagcatggcc
      961 gggcggccgc gatgggtcac catgcccttg acggtggcgg tggtgaccag cggggcgggg
     1021 atggacagcg gcaggacgcg gccgatttcg atgcagcccg acagggtgtc gccgctgcgc
     1081 aacgggccgg gcagggcggc gggcgggcgg gcaccgacca ggaagcgcag cgcgcccacg
     1141 aacggcgcgt cggtcatgcc ggcggggcag cgggcggaat cggccggctg ggcgatcggc
     1201 tgcggctgcc aggtgtcggg cggaagctgg cgcgaggcgc gcacgaagga cggcgccttc
     1261 cacacgccgg ccacctgcgc ctgccgaatc tcgccgtcct catcaacgcc gttcttgtag
     1321 acgcggccgg cgacgtcctc ggtgatgcgg tacgaggtgg cgaacgggct ggcgcggacg
     1381 ggcgagcggg tcagcgtcac cggcgtgtcg atggcggcga ttgcgtcccg gccgtggacg
     1441 taatcggggc cgccctcgac cagggcctgg gcggcgaccg gctcgcggcg gtcggtctgg
     1501 cggcccagca ggccgtcgaa cacgaagaac gacaccgtgc ccatcacggc aagggcggcg
     1561 gcggccttga ggtacagctt gatgtccacg ctcagtgctc gcggtgcgag gcgaaggcga
     1621 tcttgtccac ccaggccagg atcagggccg agacgacgaa ggtcaggtgg atgatcacca
     1681 gccacatcag cttgtcgttg ggggtgtcct gggcgttcat gaacgccttc agcaggtgga
     1741 tcgacgagat ggcgacgatg ctggccgcta ccttgacctt cagcgtgccg gcatcgagct
     1801 tgcccagcca ggcgaggttc tcgttcttgg ccgcctcgat gcgcgacacg aagctttcgt
     1861 agcccgacag gatcaccatc accagcaggt tgcccaccag caccagatcc atcaacgcca
     1921 gcgcggtcag gatcaggtcg gcctcggcca tggccggcag catgggcacc acgtgcacca
     1981 gttcctgcac gaacttggcg gtgaacagca gcagggtcag cgtcaggccg acatacagcg
     2041 gcaccagcag ccagcggccg gcgaacagga agcgctcgac ggcgttctcg atcggatggg
     2101 gtttgcgcgg ttcgacatgc atggtggatg gatagcacaa gcggggggaa ggttcatcgc
     2161 ggatttcgct c
//
LOCUS       DATIKR010000388         7258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66618, whole genome shotgun sequence.
ACCESSION   DATIKR010000388 DATIKR010000000
VERSION     DATIKR010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 7258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7258
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66618"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VLL76_06165"
     CDS             <1..319
                     /locus_tag="VLL76_06165"
                     /inference="COORDINATES: protein motif:HMM:NF027249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HSV29121.1"
                     /translation="VPGCVSVGRTLDEARAMAAEALAGHLAMLEAEGEPMPVPSSMEA
                     LRDDPNRGGAVAILVDLEPDFLKAERVNVMIPRNLLGRIDAASGGNRSRFIVEAAEQK
                     LAG"
     gene            complement(344..817)
                     /locus_tag="VLL76_06170"
     CDS             complement(344..817)
                     /locus_tag="VLL76_06170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29122.1"
                     /translation="MIDPVNNTQSLSFTAPAKPAEATANPFDAALKAAQKAAASEEAH
                     KKEIEAIKQHGFTDWVRDTQIEKLKEELRKKVLAAMGLDEDQLGRMSAAVQQVLEQKI
                     QEEVERQLEEIAAQEQGKGQSVVANAAKPVGNNDPQGKKCPVIPGLAWPGGASVL"
     gene            complement(860..1486)
                     /gene="aat"
                     /locus_tag="VLL76_06175"
     CDS             complement(860..1486)
                     /gene="aat"
                     /locus_tag="VLL76_06175"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HSV29123.1"
                     /translation="MRPLTSDLLLRAYAMGIFPMARSRHDPRLYWIDPDQRGILPLSE
                     FHIPKSLKKVLKKAPFEIRCDTAYEEVMQGCGESTRDRPDTWINDEIVRLFVELHHLG
                     MAHSVETWRDGRLVGGLYGLALGGAFFGESMFSRETDASKVALVHLVARLKKGGFQLL
                     DTQFVTEHLARFGALEIQRHDYLKRLNRAIELPALFERGPVDWELALA"
     gene            complement(1583..1993)
                     /locus_tag="VLL76_06180"
     CDS             complement(1583..1993)
                     /locus_tag="VLL76_06180"
                     /inference="COORDINATES: protein motif:HMM:NF022829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2795 domain-containing protein"
                     /protein_id="HSV29124.1"
                     /translation="MARSLVQALEGIPFPCDRSRLIEYARTHEAAPKAMDSLTALPEG
                     EYRTLTDVLTALPSKEQMRRRTIVTVRQSLREAEKPAEKPEPRPQRAEAKPRPRAEPR
                     EEPRPSQDDATPEAADWVSDYVRFWQRFFFPWLR"
     gene            complement(2102..3445)
                     /gene="accC"
                     /locus_tag="VLL76_06185"
     CDS             complement(2102..3445)
                     /gene="accC"
                     /locus_tag="VLL76_06185"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HSV29125.1"
                     /translation="MFEKVLIANRGEIALRIHRACREMGIRTVAVHSTADNDAMHVRL
                     ADEAVCIGPPSAKDSYLNKAAILSAATITGADAIHPGYGFLSENADFAAMVEEHGFVF
                     IGPSPEHIRMMGDKITAKVAAKSAGLPCVPGSEGALDNEDEALACAEVTGYPVLIKAT
                     AGGGGKGMKVARNPEELRESYRLARNEAKAAFGNSDVYMEKYLGRPRHIEMQILADNY
                     GNVVHLGERDCSLQRRHQKVLEEAPSPALNASQREGIGNVAREAIKKLGYRNAGTIEF
                     LYENGEFYFIEMNTRLQVEHPVTEAITGIDLVREQIRIAAGAPLGYEQKDVVFQGHAI
                     ECRVNAEDPDTFTPSPGRVAGYHAPGGLGVRVDSGLYAGYRIPPHYDSMIAKLIVSGN
                     SRNEVLMRLRRALGEYVIDGVKTTLPLHNRLVQDQDFVNGDYDIHWLEKWVAQHS"
     gene            complement(3452..3907)
                     /gene="accB"
                     /locus_tag="VLL76_06190"
     CDS             complement(3452..3907)
                     /gene="accB"
                     /locus_tag="VLL76_06190"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HSV29126.1"
                     /translation="MATKSFDSELVRSLATLLDETNLTEIEYDTGSIRIRVARQGAPV
                     AVHHAAPAMPAVAAHPVAQPAPVALDDANHPGAVTSPMVGVSYLSPEPGAAKFIEVGA
                     TVSEGQTLMLIEAMKTFNPIRAPRGGKVTRILVTDGQPVEFGEPLVIVE"
     gene            complement(3915..4361)
                     /gene="aroQ"
                     /locus_tag="VLL76_06195"
     CDS             complement(3915..4361)
                     /gene="aroQ"
                     /locus_tag="VLL76_06195"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HSV29127.1"
                     /translation="MANPIVLIVNGPNLNMLGKRQPEVYGTETLADIEKACLGHGSSV
                     GMDVEFRQSNHEGDLVDWIQQARGRCAGIIINAGAYTHTSIAILDALLAAEVPTVEVH
                     LSNIHQREEFRHASYVSKAAKGMICGFGSHGYILALDALARMIRGR"
     gene            4521..>7258
                     /locus_tag="VLL76_06200"
     CDS             4521..>7258
                     /locus_tag="VLL76_06200"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HSV29128.1"
                     /translation="MSRRVVAIAAVAVVAAISGLAVWNMPARQAAVQQPAPAPVASAA
                     PERLIEAKSQPARPATPGQLRFRRVEAETGGEAAEACLVFDAELPDSGVRWDEYAVVK
                     GGAKVTYRTDAKKRLCLGGLGFGIDYVVSLRAGLPAADGGKLAETVEVPVGFGDRRAS
                     VSFGSGLILPRESGDSVPVTTVNAARLDVRVMRVGDRMVARMRQGFAEERSLYTYQVN
                     EIRDDDGHLVWNGKVDIAGPRNEAVVSQIPVGELVRGQPPGIFLITASLPKNAVAESD
                     DDDEYSYGTTAGQWIVHSDIGLTAFSGDGLTVFARSLASAKPMAGLDLVLVARNNEEL
                     ARVKTDASGRAAFDPGLMRGQGGMAPVMVMAYARGDYNFLDLRRSEFDLSDRGVDGRP
                     PSGPVDAFLYTERGIYRPGETVELVALLRDPEVRALGGRPAVVKVMRPDGREFKRWRL
                     EDKGGGALHVSVALPAAANRGMWQATAHADPEGPVIGKVAFDVQDFVPQRLGLTIGER
                     PASLRPKAELSIPVEARFLYGAPASELGGEAELVYAPDPAPYPAYKGFRWGLHDERFN
                     PGDRVPLDIPATDAQGRTVVTGRLGDIPASSLPLRAEISIAIREPGGRTTGEHFTVPV
                     RSRALDIGVRPHFADSVREGTDATFDVIAVDDDGNRSTQNLAWRITREDYSWQWYRRG
                     TEWRYEAVTREREVAAGTVATSIGEPAVLRQRVGWGRYKLTVTDPVTRIATTVPFYAG
                     WYGGQSADRPDRLVVAADRPGYAAGETARLNVEAEADGEALLVVANERVHETRVFRVS
                     KGGNEVSVPVKPEWGPGAYALVTVYRPLDARLGHAPVRSVGVAWLGLDPARRTLAVEI
                     GGPQKVGPRGRVDIPVKVAATGGTLDKAHVTLAAVDQGILQLTRFQTPNPAAHYLS"
BASE COUNT         1072 a         2441 c         2534 g         1211 t
ORIGIN      
        1 cgtccccgga tgcgtctccg tcggccgcac tctcgacgaa gcgcgtgcca tggccgccga
       61 ggcattggcg gggcatctcg ccatgctgga ggccgagggg gagccgatgc cggttccgtc
      121 gtccatggag gcgttgcgcg atgatcccaa ccgaggcgga gcggtggcga tcctggtcga
      181 cctggagccc gatttcctca aggccgaacg cgtcaacgtc atgatcccgc gcaacctgtt
      241 ggggcgcatc gacgccgcca gcggcggcaa ccgctcacgc ttcatcgtcg aagccgccga
      301 acagaagctg gccggctaga ccctcgccgg ccagacgatc cgatcaaagc accgacgcgc
      361 cgcccggcca ggccaggccg ggaatgaccg ggcatttctt gccctgtggg tcattattgc
      421 cgaccggttt ggccgcgttg gcgaccacgc tctggccctt gccctgttcc tgggcggcga
      481 tttcctcaag ctggcgctcg acctcttcct ggatcttctg ttccaggacc tgctgcacgg
      541 cggcgctcat gcggccaagc tggtcttcgt ccaggcccat ggcggccagc accttcttgc
      601 gcagctcttc cttcagcttc tcgatctggg tgtcgcggac ccagtcggtg aagccgtgtt
      661 gcttgatcgc ttcgatctct ttcttgtgcg cctcctcgct ggcggccgcc ttctgcgccg
      721 ccttcagggc ggcatcgaac gggttggcgg ttgcttcggc cggcttggcg ggggccgtga
      781 aggaaagcga ctgggtgttg ttgactgggt cgatcatgcc ggcacctgtg acgaaatggt
      841 gccgaaacgg ttgcaaggat caggccagcg ccaattccca atccaccggg ccgcgctcga
      901 acaaggcggg cagctcgatg gcgcggttga gccgcttcag atagtcatgg cgctggatct
      961 ccagcgcgcc gaagcgggcc aggtgctcgg tgacgaattg ggtgtccagc aattggaagc
     1021 cgcctttctt cagccttgcg accagatgca ccagcgccac cttcgaggcg tcggtctcgc
     1081 ggctgaacat gctttcgccg aagaacgccc cgcccagcgc cagcccatac agcccgccga
     1141 ccagccggcc gtcgcgccag gtttccaccg aatgggccat gcccaggtgg tgcagttcca
     1201 cgaacagccg cacgatctcg tcgttgatcc aggtgtcggg gcgatcgcgg gtgctttcgc
     1261 cgcagccctg catcacctcc tcgtaggcgg tgtcgcagcg gatctcgaac ggagccttct
     1321 tcagtacctt cttgagcgac ttggggatgt ggaattcgga cagcggcagg atgccgcgct
     1381 ggtcggggtc gatccagtac aggcgcgggt cgtgccgcga ccgcgccatg ggaaagatcc
     1441 ccatggcata ggcgcgcagc agaagatccg atgtcagtgg ccgcacggcc ggattctctc
     1501 catccgtaag gcgtccgggc accgcccggc gcctgccagc aacataggac caatcgaagg
     1561 ggatttccag gacgcggcgt cgtcagcgca gccagggaaa gaagaagcgc tgccagaaac
     1621 ggacataatc cgacacccag tcggcggcct cgggcgtggc gtcgtcctgg ctggggcggg
     1681 gctcttcgcg gggctccgcg cggggtcgcg gcttcgcttc cgcccgttgc ggccggggtt
     1741 cgggcttttc cgccggcttt tccgcctccc gcagggactg gcgtacggtg acgatcgtgc
     1801 gccgccgcat ctgctccttg gatggcaggg cggtcagcac gtccgtcaag gtgcggtatt
     1861 cgccctcggg caacgccgtc agggaatcca tcgccttggg cgcggcctcg tgggtgcgtg
     1921 cgtattcgat caaccgcgac cggtcgcacg ggaacggaat gccctccagg gcctggacca
     1981 gcgaacgtgc cattgtctac cctccgccaa gccaacaacg ggggggcgga aagggttcgc
     2041 cgcgccaatg aaaaaggcgg cggcatcact gccaccgcct cttcagagcg ccttggcggc
     2101 atcagctatg ctgcgccacc cacttttcca gccagtggat gtcgtagtcg ccgttgacga
     2161 agtcctggtc ctggaccagg cggttgtgca gcggcagggt ggtcttgacg ccgtcgatga
     2221 cgtattcgcc cagggcgcgg cgcaggcgca tcagcacctc gttgcgcgaa ttgcccgaca
     2281 cgatcagctt ggcgatcatg ctgtcgtaat gcggcgggat gcggtagccg gcatacaggc
     2341 cggaatcgac gcgcacgccc aggccgcccg gcgcgtgata gcccgccacc cggcccggcg
     2401 agggggtgaa ggtgtcgggg tcctcggcgt tgacgcggca ttcgatggcg tggccctgga
     2461 acaccacgtc cttctgctcg taaccgagcg gcgcgccggc ggcgatgcgg atctgctcgc
     2521 gcaccaggtc gatgccggtg atggcctcgg tcaccggatg ctccacctgc aggcgggtgt
     2581 tcatctcgat gaaatagaac tcgccgttct cgtacaggaa ctcgatggtg ccggcgttgc
     2641 gatagcccag cttcttgatg gcttcgcggg cgacgttgcc gatgccctcg cgctggctgg
     2701 cgttcagcgc cggcgacggc gcctcttcca gcaccttctg gtggcggcgc tgcaagctgc
     2761 agtcgcgctc gcccagatgc accacgttgc cgtaattgtc ggccaggatc tgcatctcga
     2821 tgtgccgcgg gcggccgaga tacttctcca tgtagacgtc ggaattgccg aacgccgcct
     2881 tggcttcgtt acgggccagg cgataggatt cgcgcagctc ttccgggttg cgggcgacct
     2941 tcatgccctt gccgccgccg ccggcggtgg ccttgatcag caccggatag ccggtcacct
     3001 cggcgcaggc cagggcctcg tcctcgttgt ccagcgcccc ttccgaaccg ggcacgcagg
     3061 gcaggccggc cgacttggcg gcgaccttgg ccgtgatctt gtcgcccatc atgcggatgt
     3121 gttcggggct ggggccgatg aacacgaagc cgtgctcctc gaccatggcc gcgaagtcgg
     3181 cgttctcgga caagaagccg tagccgggat ggatggcgtc cgccccggtg atggtggcgg
     3241 ccgacaggat ggcggccttg ttgagatagg aatccttcgc cgacggcggg ccgatgcaca
     3301 ccgcctcgtc ggcgaggcgg acgtgcatgg cgtcgttgtc cgcggtcgag tgcacggcga
     3361 cggtgcggat acccatctcg cggcaggcgc ggtggatgcg aagcgcgatc tcgccgcggt
     3421 tggcgatgag gaccttctcg aacatcgagc cctactcgac gatgacgagc ggctcgccga
     3481 actcgacggg ctggccgtcg gtgacgagga tgcgggtgac cttgccgccg cgcggggcgc
     3541 ggatcgggtt gaaggtcttc atggcctcga tcagcatcaa ggtctggcct tccgagacgg
     3601 tggcgccgac ttcgatgaac ttggccgcgc ccggctcggg cgaaaggtag gacacgccga
     3661 ccatgggcga ggtcaccgcg cccggatggt tggcgtcgtc cagggcgacc ggcgcgggct
     3721 gcgccaccgg gtgggcggcg acggccggca tggccggggc ggcgtgatgg accgcgaccg
     3781 gcgcgccctg gcgggcgacg cggatgcgga tcgagccggt gtcgtattcg atctcggtga
     3841 ggttggtctc atcgagcagc gtggcgagcg agcggaccag ctcggaatca aacgatttgg
     3901 tggccatgtg cctgtcagcg tcccctgatc atacgggcga gggcgtccag cgccaggatg
     3961 tagccgtggc ttccgaagcc gcagatcatc cccttcgccg ccttggatac gtatgaagcg
     4021 tgtcggaatt cttcccgctg gtgaatgttg gacagatgca cttcgacggt cgggacctcg
     4081 gcggcgagaa gggcgtcgag gatggcgatc gaagtgtggg tgtaggcccc ggcattgatg
     4141 atgatgccgg cgcagcgacc cctggcctgc tgaatccagt ccaccaggtc gccctcgtgg
     4201 ttggactggc ggaattccac gtccatgccc accgaggaac cgtgccccag gcacgccttc
     4261 tcgatgtcgg ccagcgtctc ggtgccatag acctcgggct ggcgcttgcc gagcatgttg
     4321 aggttcgggc cgttgacgat caggacaatg gggttcgcca tgccgccctt atagcacggt
     4381 caaggattgg tgcaacctca tcctgagggg cgcgaaatat tgttgcgttg caatcgaacc
     4441 cgccccgaca cccccttgcc aacactcgcc ggatggtgga aatttcaagc gggtgttcgg
     4501 gtgcttccgg ggggaaatcg atgagccgtc gcgtcgtcgc aattgccgct gtcgcggtgg
     4561 tcgccgccat ttccggcctg gccgtgtgga acatgccggc acggcaagcg gcggtgcagc
     4621 agccggcgcc ggcgccggtg gcgtccgccg cgcccgagcg cttgatcgag gccaagtccc
     4681 agccggcgcg ccccgctacc ccgggccagt tgcgttttcg ccgggtcgag gccgagaccg
     4741 ggggcgaggc cgccgaggcc tgcctggtat tcgacgccga actgccggac agcggcgtgc
     4801 gctgggacga atacgcggtg gtcaagggcg gcgccaaggt gacctatcgc accgacgcca
     4861 agaagcggct gtgcctgggc ggattgggct tcggcatcga ttacgtcgtc agcctgcgcg
     4921 ccggcctgcc cgccgccgac ggcggcaagc tggccgagac cgtcgaggtg cctgtcggat
     4981 tcggcgaccg gcgggcgtcg gtgtcgttcg gttccggcct gatcctgccg cgcgaatcgg
     5041 gcgacagcgt gccggtcacc accgtcaacg cggcgcgcct ggacgtgcgg gtgatgcggg
     5101 tgggcgaccg catggtggcg cgcatgcgcc agggcttcgc cgaggagcgc agcctctata
     5161 cttaccaggt caacgaaatc cgcgacgacg acggccatct ggtgtggaac ggcaaggtcg
     5221 acatcgccgg tcccaggaac gaggcggtgg tcagccagat tcccgtcggc gagctggtgc
     5281 gcggccagcc gccgggcatc ttcctgatca cggccagcct tcccaagaac gccgtggccg
     5341 agtccgacga cgacgacgaa tattcctacg gcacgacggc cgggcagtgg atcgtccatt
     5401 ccgacatcgg cctgaccgcg ttctcgggcg acggcctgac cgtgttcgcc cgctcgctgg
     5461 cctcggccaa gcccatggcg gggctcgacc tggtgctggt ggcgcgcaac aacgaggaac
     5521 tggcgcgggt caagaccgac gcgtcgggcc gcgccgcctt cgatcccggc ctgatgcgcg
     5581 gccagggcgg catggcgccg gtcatggtga tggcctatgc ccggggcgac tacaatttcc
     5641 tggacctgcg gcggtcggaa ttcgacctgt ccgaccgggg cgtcgacggc cgtccgccgt
     5701 ccggcccggt ggacgccttc ctctataccg aacgcggcat ctaccgcccc ggcgagacgg
     5761 tggagctggt ggcgctgctg cgcgatcccg aggtgcgggc gctgggcggc cggccggcgg
     5821 tggtcaaggt gatgcgcccc gatggccgcg agttcaagcg ctggcggctc gaggacaagg
     5881 gcggcggcgc cctgcatgtg tcggtggcgc tgccggcggc ggccaatcgc ggcatgtggc
     5941 aggccaccgc ccacgccgac cccgaaggcc ccgtcatcgg caaggtggcg ttcgacgtgc
     6001 aggatttcgt gccgcaacgc ctgggcctga ccatcggcga gcggccggcc tcgttgcgcc
     6061 ccaaggccga gttgtccatc ccggtcgagg cccgcttcct ctatggcgcc cccgcgtccg
     6121 aactgggcgg cgaggccgag ctggtctacg cccccgaccc ggcgccgtac cccgcctaca
     6181 agggcttccg ctgggggctg cacgacgagc gcttcaatcc cggtgaccgc gtccctctcg
     6241 acatcccggc gaccgacgcc caggggcgca cggtcgtgac cggccggctg ggcgacatcc
     6301 ctgcctcgtc gttgccgttg cgggccgaga tttccatcgc catccgcgag ccgggcggcc
     6361 gcaccaccgg cgaacacttc accgtgccgg tgcgcagccg cgccctcgac atcggcgttc
     6421 gcccccattt cgccgacagc gtgcgcgagg gaacggacgc caccttcgac gtcatcgcgg
     6481 tggacgatga cggcaaccgc tccacccaga acctggcctg gcgcatcacg cgcgaggatt
     6541 acagctggca atggtaccgg cgcggcaccg aatggcgcta cgaggcggtc acccgcgagc
     6601 gcgaggtcgc cgccggcacc gtcgccacct ccatcggcga gcctgccgtg ctgcgccagc
     6661 gcgtcggctg gggccgctac aagctgaccg tgaccgatcc ggtgacgcgg atcgcgacga
     6721 cggtgccgtt ctacgccggc tggtacggcg gccagagtgc cgaccgtccc gaccgcctgg
     6781 tcgtcgcggc cgaccggccc ggctatgccg ccggcgagac cgcccgcctc aacgtcgagg
     6841 ccgaggccga cggcgaggcc ctgctggtcg tcgccaacga acgcgtccac gagacccgcg
     6901 tgttccgggt gtccaagggc ggcaacgagg tctcggtgcc ggtcaagccg gaatgggggc
     6961 cgggcgccta tgccctggtc accgtctacc gcccgctgga tgcccggctg ggccacgccc
     7021 cggtgcgctc ggtgggcgtc gcctggctcg gcctcgatcc ggcccggcgg accctggcgg
     7081 tcgagatcgg cggcccccag aaggtggggc cgcgcggccg cgtcgatatc ccggtcaagg
     7141 tcgccgccac tggcgggacc ctcgacaagg cgcacgtcac cctggcggcg gtggaccagg
     7201 gcatcctgca actgacccgc ttccagaccc ccaatccggc ggcccattac ctgtcgaa
//
LOCUS       DATIKR010000389         1862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_126858, whole genome shotgun sequence.
ACCESSION   DATIKR010000389 DATIKR010000000
VERSION     DATIKR010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126858"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VLL76_06205"
     CDS             <1..539
                     /locus_tag="VLL76_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV29129.1"
                     /translation="AAEWQRMGLGPIRIAINASARQINQGDIMAALTKALDATGLDPA
                     LVTLEITEGLILGSGEEVLVKLERIRALGTLIAVDDFGTGYASLSTLKHFPVDVLKID
                     RSFVSDANENPEDARLVEAIIALGHSLGMKVVGEGVETIEQLAFLAERGCDFVQGYRF
                     SPPLTADRFREFVRGRHA"
     gene            591..>1862
                     /locus_tag="VLL76_06210"
     CDS             591..>1862
                     /locus_tag="VLL76_06210"
                     /inference="COORDINATES: protein motif:HMM:NF019315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7TM diverse intracellular signaling
                     domain-containing protein"
                     /protein_id="HSV29130.1"
                     /translation="MLKWLPAALFCLALTLLSACGGGGAESPAAREGVVDLTRWDFSA
                     SGAVELRGQWGFVWGSDPTAAFSGDFPQFIDQPGVWNRAGHPGLGRASLALTVMLPAG
                     APPLALTLPDVNSAYRLHLNGSPALQVGRLGDEAATEIPVYQRPLVRVPPGTRHLEIV
                     IEISNHHHFEGGLGRALRLGPTEALEAERGSRQLVSVAALGALLVVLLLQLAFWAGGR
                     HDRAFLLFAAFTALMAARASASGLVYAIVDPNLRADIWYLVPAYLTLFAFPGIYLAFL
                     RELFPAEVPRLVVRPVVWLSLAAAAAVLVLPPALYTRLRDPFQVLVLLAPLAGLTMLA
                     VAVWRRRPGAGWMLAGSSAFVATVVNDSLHYQRVIESADLSSLGFAALAVGYAAALSL
                     KLFRSESEASARLAVLNRDLEDKVAERTASLA"
BASE COUNT          236 a          617 c          664 g          345 t
ORIGIN      
        1 aggcggcgga atggcagcgc atggggctgg ggccgatccg catcgccatc aacgcctcgg
       61 cgcggcagat caaccagggc gacatcatgg cggcgctgac caaggcgctg gacgcgaccg
      121 ggctggaccc ggcgctggtg acgctggaga tcaccgaggg gctgatcctg gggtcgggcg
      181 aagaggtgtt ggtcaagctg gaacgcatcc gggcattggg caccctgatc gcggtggacg
      241 atttcggcac cggctacgct tcgctcagca ccctcaagca tttcccggta gacgtgttga
      301 aaattgaccg ttcattcgtg tccgacgcga atgagaatcc cgaggacgct cggctggtcg
      361 aagccatcat cgcgcttggg cattccctgg gcatgaaggt ggtgggcgag ggcgtcgaga
      421 ccatcgagca attggctttc ctggccgaac gcggctgcga tttcgtccag ggctatcgct
      481 tcagcccgcc gctgacggcc gaccgtttcc gcgagttcgt gcggggcagg cacgcctgat
      541 cgggtattca cctgatttga cacttgtgtg caggcgggcg aaaactagcg atgctcaagt
      601 ggttgcccgc cgccttgttc tgcctggctt tgacgctgct gtccgcgtgc ggtggcggcg
      661 gcgccgaatc gcctgcggcg cgggaaggcg tggtcgatct cacgcgctgg gacttttcgg
      721 ctagcggggc ggtggaactg cggggccaat ggggtttcgt gtggggcagc gatcccaccg
      781 ccgcgttctc gggtgatttt ccccaattca tcgaccagcc gggggtgtgg aaccgcgccg
      841 gccatcccgg gctgggccgc gcctcgctgg cgctgacggt gatgctgccg gccggcgctc
      901 cgccgctggc gctgaccctg cccgacgtca acagcgccta tcgcctgcac ctcaacggat
      961 cgccggcgct gcaggtcggg cggctgggcg acgaagccgc cacggaaatc cccgtctacc
     1021 aaaggccgct ggtgcgggtg ccgccgggca cccgccacct ggaaatcgtc atcgagattt
     1081 ccaaccacca tcatttcgag ggcggcctgg gccgcgccct gcggctgggc ccgaccgagg
     1141 cgctggaggc cgagcgcggc tcgcgccaat tggtgtcggt ggcggcgctg ggcgcgttgc
     1201 tggtggtgct gttgctgcaa ctggcattct gggccggcgg ccggcacgac cgcgccttcc
     1261 tgctgttcgc cgccttcacc gccctgatgg cggcgcgggc gtcggcgtcg gggctggtct
     1321 acgccatcgt cgatcccaac ctgcgcgccg acatctggta cctggtgccg gcctatctca
     1381 cgttgttcgc cttccccgga atctacctgg ccttcctgcg cgagttgttc ccggccgagg
     1441 tgccgcgtct ggtggtccgt ccggtcgtct ggctgtcgct cgctgccgcc gccgccgtgc
     1501 tggtgctgcc gccggcgctt tacacccgcc tgcgcgatcc cttccaggta ctggtcctgc
     1561 tggcaccgct ggcgggcctg accatgctgg ccgtggcggt gtggcgccga cggcccggcg
     1621 cggggtggat gctggccggc agcagcgcct tcgtcgccac cgtggtcaac gattcgctgc
     1681 actaccagcg cgtcatcgag tcggcggacc tgtcgtcgct gggcttcgcg gcgctggcgg
     1741 tgggttacgc ggcggcgttg tcgctgaagc tgttccgctc cgaatccgag gcctcggcgc
     1801 ggcttgccgt gctgaaccgc gatctcgagg acaaggtggc cgagcgcacc gccagcctgg
     1861 cc
//
LOCUS       DATIKR010000390         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175490, whole genome shotgun sequence.
ACCESSION   DATIKR010000390 DATIKR010000000
VERSION     DATIKR010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175490"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..1256)
                     /locus_tag="VLL76_06215"
     CDS             complement(171..1256)
                     /locus_tag="VLL76_06215"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HSV29131.1"
                     /translation="MTKIPAPLPPGSTIGIIGSGQLGRMAALAAAKLGYRVHVFSPEA
                     DSPAEQVAAEATIAAYTDQAALTAFARSVDVVTFEFENIPAESVKLLSGLVPVRPSWK
                     VLEVAQDRIHEKQFFNDIGINTAPWREVASLADLEQAVAEIGRPSILKTTRLGYDGKG
                     QVKILPGTDLAEAWSYMGNAVGVLEGFVDFAGEVSVIVARGLDGGWAAFDPAWNVHTN
                     HILDTTTVPAPVDASTIAEAITVAHKAAEKLELVGLLAVEMFVTRDGHILANEMAPRP
                     HNSGHWTMDACVTDQFEQFIRAVAGLPLGSPERHSDAVMKNLIGDDVNDWLGILQDPG
                     AKLHLYGKAEARSGRKMGHVNRIRPRH"
     gene            complement(1253..>1574)
                     /locus_tag="VLL76_06220"
     CDS             complement(1253..>1574)
                     /locus_tag="VLL76_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HSV29132.1"
                     /translation="GAGGAAHLPGMAASMTTLPVFGVPVESKALKGQDSLLSIVQMPG
                     GIPVGTLAIGKAGATNAGLLAASVIALLDAGVAAKLEAWRARQTESVAEAPVDPENPD
                     LIRP"
BASE COUNT          234 a          517 c          562 g          261 t
ORIGIN      
        1 aggtccacac caggatgacc gggtagagca ggtagccgta ctgcgtcagg atggtatgga
       61 cgatatcttc caaggcggcg acccgtgggg cttggcgttg acggcttcta ggggcaaaaa
      121 tcccctgttc ggcttaggtc cgtcaatgcc gaaatgcaag gccgggccgg ttaatggcgc
      181 ggccggatcc ggttgacgtg acccatcttg cggcccgacc gggcctcggc cttgccgtac
      241 aggtgcagct tggcgccggg gtcctgcagg atgcccagcc agtcgttgac gtcgtcgccg
      301 atcagattct tcatcaccgc gtcggaatga cgctcggggc tgcccagcgg caggccggcg
      361 acggcgcgga tgaattgctc gaactggtcg gtgacgcagg cgtccatggt ccagtggccg
      421 gaattgtgcg ggcgcggcgc catctcgttg gccaggatgt ggccgtcgcg ggtgacgaac
      481 atttcgaccg ccaacaggcc caccagttcc agcttctcgg ccgccttgtg ggccaccgtg
      541 atggcctcgg cgatggtcga ggcatccacc ggggcgggga ccgtggtggt gtcgaggatg
      601 tggttggtgt ggacgttcca cgccgggtcg aacgccgccc agccgccgtc gaggccgcgc
      661 gccacgatca ccgagacctc gccggcgaaa tcgacgaagc cctccagcac gccgacggcg
      721 ttgcccatat acgaccacgc ctcggccaga tcggtaccgg gcaggatctt gacctggccc
      781 ttgccgtcat agcccagccg ggtggtcttg aggatcgacg ggcggccgat ctcggccacc
      841 gcctgctcca ggtcggccag gctggcgacc tcgcgccacg gcgcggtgtt gatgccgatg
      901 tcgttgaaga actgcttctc gtggatgcgg tcctgggcga cttccagcac cttccacgac
      961 ggccgcaccg gcaccagccc ggacagcagc ttcaccgatt ccgcagggat gttctcgaac
     1021 tcgaaggtca ccacgtccac cgagcgcgcg aaggcggtca gcgcggcctg gtcggtgtag
     1081 gcggcgatgg tggcctcggc ggcgacctgt tcggccgggc tgtcggcctc cgggctgaag
     1141 acgtggacgc gatagcccag cttggcggcg gccaaggccg ccatgcggcc gagttggccg
     1201 ctgccgatga tgccgatggt gctgcccggg ggcagggggg cgggaatttt ggtcacggcc
     1261 tgatgaggtc tgggttctcg gggtcgaccg gggcttccgc caccgattcg gtctggcggg
     1321 cgcgccaggc ttccagcttg gcggccacgc cagcatccag cagcgcgatc accgacgccg
     1381 ccagcaggcc ggcattggtg gcgcccgcct tgccgatggc cagggtgccg acgggaatac
     1441 cgcccggcat ctgcacgatc gacagcagcg aatcctggcc cttgagcgcc ttgctttcca
     1501 ccggcacgcc gaacaccggc agggtggtca tgctggcggc catgccgggc aggtgcgccg
     1561 cgccgccggc gccg
//
LOCUS       DATIKR010000391         1736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_163146, whole genome shotgun sequence.
ACCESSION   DATIKR010000391 DATIKR010000000
VERSION     DATIKR010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163146"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VLL76_06225"
     CDS             complement(<1..303)
                     /locus_tag="VLL76_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HSV29133.1"
                     /translation="MARVKEDYRSLTGPQKAAMLMLSLGEEHSSKLFGLMGDDEIKEL
                     SQIMANLGTVSSSLVERLFVEFADQISSTGSLVGSFESTERLLMKSLPKDRVSTIME"
     gene            complement(310..>1736)
                     /gene="fliF"
                     /locus_tag="VLL76_06230"
     CDS             complement(310..>1736)
                     /gene="fliF"
                     /locus_tag="VLL76_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HSV29134.1"
                     /translation="VSKDRKAELRVKMAEQAMPSTGRVAGYELFDKQDPLGTTSFQQN
                     LNYVRAMEGELARTIRSIEKVKSARVHLVLPKREAFSRETNEPSASVVLKMQGAARLD
                     RAQVLAIQHLIAAAVPKMKPSRISIVDDRGTLLAKGFESDQAVAASNAEEMRLNAEQR
                     YARTIEELLERSLGPGRVRAEVSIEMDLSRAVTTEEIFDPESRVVRSQVTVTEDEKSQ
                     DGSPTPVSVGQNLPDPNASLGSNSGSSSSSNKTQETVNYEITKKTKNVVREMGEIRKI
                     SAAVLVDVIREKGADGNFVQRERTAEELAQIEALVKSAIGFTRDREDQIKVAQMSFHK
                     GDEIASDEEPGEFIFGMRRDFVEKVASNLGLSIVAILFLLLVLRPLISRAIESMQGQV
                     GPDGRRLITGEGGVPQLAGPGAAPVPAPALGGEEEVIADELIDIDKVEGRVKASSIRK
                     IGEIVDKHPEEALSIIRSWLYQES"
BASE COUNT          255 a          565 c          583 g          333 t
ORIGIN      
        1 ttccatgatg gtgctgacgc ggtccttggg cagggacttc atcagcaggc gctcggtgct
       61 ttcgaacgag ccgaccagcg agccggtgga cgagatctgg tcggcgaatt cgacgaacag
      121 gcgctcgacc aggctggacg acaccgtgcc cagattcgcc atgatctgcg acagttcctt
      181 gatctcgtcg tcgcccatca ggccgaacag cttggaggaa tgctcctcgc ccaggctcag
      241 catcagcatg gccgcctttt gcgggccggt cagcgaacgg tagtcctctt tgacgcgtgc
      301 catgcctgct tagctttcct gatagagcca gctgcggatg atcgacaaag cctcttccgg
      361 atgcttgtcg acgatctcgc cgatcttgcg gatcgacgac gccttcacgc ggccttccac
      421 cttgtcgatg tcgatgagtt cgtcggcgat gacctcttcc tcgccgccca aggcgggcgc
      481 gggcaccggt gccgcgccgg ggccggccaa ctggggcacg ccgccctcgc cggtgatgag
      541 gcggcggccg tcgggaccga cctggccctg catcgactcg atggcgcggc tgatcagcgg
      601 gcgcagcacc agcagcagga acaggatggc gacgatggac agacccaggt tcgacgcgac
      661 cttttccacg aagtcgcggc gcatgccgaa gatgaactcg cccggctcct cgtcgctggc
      721 gatctcgtcg cccttgtgga acgacatttg ggcgaccttg atctggtcct cgcggtcgcg
      781 ggtgaagccg atggccgact tcaccagggc ctcgatctgg gccagttcct cggcggtgcg
      841 ctcgcgctgc acgaaattgc cgtcggcgcc cttttcgcgg atgacgtcca ccagcacggc
      901 ggccgagatc ttgcggatct cgcccatctc gcgcacgacg ttcttggtct tcttggtgat
      961 ctcgtagttg accgtctcct gggtcttgtt ggacgaggac gacgagccgc tgttggagcc
     1021 gagcgaggcg ttggggtcgg gcaggttctg gcccaccgac accggcgtgg gcgagccgtc
     1081 ctgggacttc tcgtcctcgg tgacggtgac ctggctgcgc accacgcggc tttcggggtc
     1141 gaagatctcc tcggtggtga cggcgcgcga caggtccatc tcgatggaca cctcggcgcg
     1201 cacgcggccc ggacccagcg agcgctccag caattcctcg atggtgcggg cgtagcgctg
     1261 ctcggcgttg aggcgcatct cctcggcatt gctggcggcg accgcctggt cgctctcgaa
     1321 gcccttggcc agcagggtgc cgcgatcatc gacgatggag atgcgcgacg gcttcatctt
     1381 gggcacggcg gcggcgatca ggtgctggat cgccagcacc tgggcacggt cgaggcgggc
     1441 ggcgccctgc atcttcagca ccaccgaggc cgacggctcg ttggtctcgc gcgagaacgc
     1501 ctcgcgcttg ggcagcacca ggtggacgcg ggcgctcttg accttctcga tggaacggat
     1561 ggtgcgcgcc agttcgcctt ccatggcgcg gacgtaattc aggttctgct ggaagctggt
     1621 ggtgcccagc gggtcctgct tgtcgaacaa ttcatagccg gcgacgcggc cggtggacgg
     1681 catggcctgt tcggccatct tgacccgcag ctcggccttg cggtccttcg acaccc
//
LOCUS       DATIKR010000392         2290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_186926, whole genome shotgun sequence.
ACCESSION   DATIKR010000392 DATIKR010000000
VERSION     DATIKR010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186926"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1216)
                     /locus_tag="VLL76_06235"
     CDS             complement(<1..1216)
                     /locus_tag="VLL76_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006088475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29135.1"
                     /translation="MKVSIDMGTTSAGGKPAVLDLEELLATRLLVQGNSGSGKSHLLR
                     RLLEQSASWVQQCIVDPEGDFVTLAEAFGHVVVDAAAHSENGLQQIAGRVRQHRISVV
                     LNLENLEAELQMRRAAAFLGGLFDVDRDFWYPMLVVVDEAQLFAPSAAGEVSDEARKV
                     SLGAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLL
                     GMERRQAEMFRDLDRGHFIALGPAMARRPLAIRIGEVQTNARAGSPKLMPLPTTPRED
                     ARELIIKAGADEMTRPPPVYRPLPAPSTTDLLAELAQAAARPAADEPEEEPGEKPSLE
                     AILREVLTDPEAPFRSVAVLYQDFLVRCRTHRVNGRVLDLAAFRRKLAAARAGVAGEK
                     ESSPEWEQAVAFA"
     gene            complement(1366..1692)
                     /locus_tag="VLL76_06240"
     CDS             complement(1366..1692)
                     /locus_tag="VLL76_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008335736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV29136.1"
                     /translation="MTDTVTIPRAEYDAMRARIEDLDDILAGHAAHTGATLPHESAMR
                     IINGEHPLRVWREYRGMTATALAEAANVGKGYLSEIETGKKPGSIDAWKALADALGVP
                     VDALLP"
     gene            complement(1685..1942)
                     /locus_tag="VLL76_06245"
     CDS             complement(1685..1942)
                     /locus_tag="VLL76_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HSV29137.1"
                     /translation="MQIHYETRAIKDLKAIDQTARDRIVGKIVQYAAAPASQANNVKH
                     LTGSPFYRLRVGDYRVIFSLDGEVATVMTVIRVRHRREAYD"
     gene            complement(2004..>2290)
                     /locus_tag="VLL76_06250"
     CDS             complement(2004..>2290)
                     /locus_tag="VLL76_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29138.1"
                     /translation="PVRLVNVDSDIYSSARFVLFALAERMRPGTILVFDEFIGNRSWA
                     DDEFRAFHEFIAATGFGFEYLAASPATKQVVVRLKAVADRAAFRPCPVRY"
BASE COUNT          384 a          751 c          768 g          387 t
ORIGIN      
        1 aggcgaaggc caccgcctgc tcccattccg ggctgctttc cttttccccc gccacgccgg
       61 cgcgggcggc ggccagcttg cggcggaagg cggcgaggtc gagcacgcgg ccgttgacgc
      121 gatgggtgcg gcagcgcacc aggaagtcct ggtacagcac cgccaccgag cggaacggcg
      181 cctcggggtc ggtcagcacc tcgcgcagga tggcttccag cgacggcttc tcgcccggct
      241 cctcttcagg ctcgtcggcg gccgggcggg cggcggcctg ggccagctcc gccagcaggt
      301 cggtggtgct gggcgccggc agcggacgat agaccggcgg cggccgcgtc atctcgtcgg
      361 cgccggcctt gatgatcagt tcgcgggcgt cctcgcgcgg ggtggtcggc agcggcatca
      421 gcttgggcga gccggcgcgg gcgttggtct gcacctcgcc gatgcggatc gccagcggcc
      481 ggcgcgccat ggcggggcca agggcgatga aatggccgcg atcgaggtcg cggaacatct
      541 cggcctggcg gcgctccatg cccagcaggt cggcggcgcg cgccatgtcg atgtcgagaa
      601 aggtgcgccc catcaggaag ttcgacgcct cggcggcgac gttcttggcc agcttggcca
      661 ggcgctgggt ggcgatgacg ccggccaggc cgcgcttgcg gccacggcac atcaaattgg
      721 tcatggcgcc caggctgacc ttgcgcgcct cgtccgacac ctcgccggcc gccgacggcg
      781 cgaacaattg cgcctcgtcg accaccacca gcatggggta ccagaaatcg cggtccacgt
      841 cgaacagccc gcccaggaag gcggcggcgc ggcgcatctg cagctcggct tccaggtttt
      901 ccagattgag caccaccgag atgcggtgct gccgcaccct tcctgcgatc tgctgcaggc
      961 cgttctcgga atgggcggcg gcgtccacca ccacgtggcc gaacgcttcc gccagcgtga
     1021 cgaagtcgcc ctcgggatcg acgatgcatt gctgcaccca cgacgcgctc tgctcgagca
     1081 ggcggcggag caggtgcgac ttgccggaac ccgaattgcc ctggaccaac agacgggtcg
     1141 caagcagctc ctcgagatcg agaaccgccg gcttgccccc cgccgacgtg gttcccatgt
     1201 cgatgctgac cttcatgtca gaaccccagt tccacaggct gaaccacgga caaaaaaaag
     1261 ggctaccatt ttgcacccct cgaaagggtg tgtggtaacc cgtgacgacc gcaatatagc
     1321 tcgccgcctc gaaagcgcca aggaaaattg gtctagtggc gtgttctacg gcaacagggc
     1381 atccactggc acgccaagcg catcggccag tgccttccac gcatcgatgg agccaggctt
     1441 cttgcccgtc tctatctcgc ttagatagcc ctttcctaca ttggctgcct cagccaaggc
     1501 cgtagcggtc attcccctgt attcccgcca gacgcggagc gggtgttccc cattgatgat
     1561 ccgcatcgcg gattcgtgag gcagggttgc gccggtgtgg gcggcgtgcc ccgccaggat
     1621 atcgtcaagg tcttcaatgc gggctcgcat cgcatcgtat tcggcgcgcg gaatggtgac
     1681 ggtgtcagtc ataggcttcc ctccggtggc gaacgcggat cacggtcatc acggtggcga
     1741 cttctccgtc cagggagaag atcacccgat aatcacccac ccgcaggcgg tagaacggcg
     1801 aaccggtcag atgctttacg ttgttggcct gagacgccgg ggcggctgca tactggacga
     1861 tcttgccgac gatgcggtcg cgggccgtct ggtcgatggc cttcagatcc ttgatcgccc
     1921 gggtttcata atggatctgc atcgcctcgc tccgaaccct gacatgttcg ccgatagcga
     1981 acgcttatgc aagcgagaat tcgctaatag cgaacagggc aggggcggaa ggcggcgcgg
     2041 tccgcgaccg ctttcagccg cacgaccacc tgcttggtcg cggggctcgc tgccaggtat
     2101 tcgaagccga agccggtggc ggcgatgaat tcgtggaagg cgcggaattc gtcgtcggcc
     2161 caactgcggt tgccgatgaa ttcgtcgaac accaggatgg tgccggggcg catgcgttcg
     2221 gccagggcga acagcacgaa gcgggccgag gaatagatgt cgctgtccac gttgaccagc
     2281 cgcaccgggc
//
LOCUS       DATIKR010000393         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_17522, whole genome shotgun sequence.
ACCESSION   DATIKR010000393 DATIKR010000000
VERSION     DATIKR010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17522"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1616
                     /locus_tag="VLL76_06255"
     CDS             <1..1616
                     /locus_tag="VLL76_06255"
                     /inference="COORDINATES: protein motif:HMM:NF019311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PA14 domain-containing protein"
                     /protein_id="HSV29139.1"
                     /translation="IQAYLRPDRNTSAFQGRLTPTSNMFNNETGGMPAQPVKVALNRW
                     TDPSGNVLVQGLVDKGSGWAVVGSAWARDNKPWAGAGIPDDVYVGFAATGHQNDGRLE
                     TILYRNAEILPAQAPTGPLPRLRGAVVNVPESLVPDMGVWSVVEVINNGDMNSVNDAV
                     SSLQSGNGTRHAYTLAGPININDHRGNAKYFGGDRGYGVREDGIVSGEVNHIAFLARG
                     TIRVPEAGEYSFYINGDDGEELSIGNRDLVLGSEGWNDNNIGTIYLEAGDHPIQVVHR
                     EATGGADLEVAAAKGRTTNLKAFNLIGANAPARAAYDVIIPGYHGQVTVEATAPGSYR
                     PGSRDAAIQAILDGRSAGTNSVGTADKVHAADPQNGGSYFANPLPFPNDTAADDNDFA
                     FMATGKLVIPVDGTYYIGYDSDDGAALQIMGAVWQSIVENRTGNAVIAGDWLKTDAWT
                     GHSYTVGQVALAAGTYDFNFYAYEGGGGAHASIFGSSERGNYFILGQGAQSINIPAAA
                     PSLALVPEPASLSLLAIGGLSLLARRRRA"
BASE COUNT          303 a          544 c          535 g          270 t
ORIGIN      
        1 ttatccaggc ctatctgcgt cctgaccgga acacgtccgc ctttcagggg cggctgaccc
       61 cgacgtccaa catgttcaac aacgagacgg gcgggatgcc ggctcagcct gtgaaggtgg
      121 ccctgaaccg ctggaccgat ccttctggca acgtgctggt gcagggcctg gtggacaagg
      181 gttcgggctg ggcggtggtc ggcagcgcat gggcgcgcga caacaagccc tgggccggag
      241 cgggtatccc cgatgatgtc tatgtgggct ttgcggccac cgggcaccag aatgatggcc
      301 ggctggagac cattctctac cgcaacgccg agattcttcc cgcccaggca ccgactggcc
      361 cgctgccgcg cctgcgcggc gcggttgtga acgtgccgga gagcctcgtg cccgacatgg
      421 gcgtctggag cgtcgtcgag gtgatcaaca acggcgacat gaacagcgtg aacgatgcgg
      481 tcagctcgct tcagagcggc aatggcacgc gccacgccta tacactggcc ggcccgatca
      541 acatcaacga ccaccggggc aacgcgaaat attttggcgg cgaccgtggt tacggcgtgc
      601 gcgaggatgg catcgtcagc ggcgaggtca atcacattgc cttcctggcg cgtggcacga
      661 tccgcgttcc cgaggccggc gagtactcgt tctacatcaa cggcgatgac ggcgaggaac
      721 tgagcatcgg caaccgcgat ctggtgctgg gctccgaggg ttggaacgac aacaacatcg
      781 gcacgatcta cctcgaagcc ggtgatcatc cgattcaggt ggtccaccgc gaggcgacgg
      841 gcggcgcgga tctcgaagtc gccgccgcca agggccggac gacgaatctg aaggcgttca
      901 acctgatcgg cgccaacgcg ccggcccgcg ccgcctacga tgtgatcatc cccggctacc
      961 atgggcaggt gacggtcgaa gccaccgcgc ccggcagtta caggcctggc agccgcgatg
     1021 cggccatcca ggccatcctg gacggcaggt ccgccggcac caacagcgtt gggacggccg
     1081 acaaggtgca tgccgcggac ccgcagaatg gcggcagcta tttcgccaat cccctgccat
     1141 tcccgaacga caccgccgct gacgacaacg acttcgcctt catggcgacc ggcaagctgg
     1201 tcatccccgt cgatggcacc tactacatcg gctatgacag cgacgacggc gcagcgctcc
     1261 agatcatggg cgcggtgtgg cagtcgatcg tcgagaacag aaccggcaac gcggtgatcg
     1321 ccggcgactg gctcaagacc gacgcatgga ccggccacag ctacaccgtc ggccaggtgg
     1381 cgctggcggc cggcacgtat gacttcaact tctacgctta cgaaggcggc ggcggcgcgc
     1441 acgcctcgat ctttgggtcg tccgagcgcg ggaactattt catcctgggc cagggtgccc
     1501 agtcgatcaa catcccggcg gccgctccgt ctctggcgct ggtgcccgag ccggcatcgc
     1561 tttctctgct cgccattggc ggactgagcc tccttgcgcg gcgtcgccga gcgtaagttc
     1621 cagtgtcccc aacctgactt atagcttcaa ag
//
LOCUS       DATIKR010000394         3699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_78923, whole genome shotgun sequence.
ACCESSION   DATIKR010000394 DATIKR010000000
VERSION     DATIKR010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3699
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78923"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..524
                     /locus_tag="VLL76_06260"
     CDS             258..524
                     /locus_tag="VLL76_06260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29140.1"
                     /translation="MIKLLTLCLAVFAVLAATNPRQDDHARKLVEHAQQGCAENPLGK
                     LLCGGMAALASPTIDYRDHVVFSTARLGESETLGVLGKVMVIGG"
     gene            622..1653
                     /locus_tag="VLL76_06265"
     CDS             622..1653
                     /locus_tag="VLL76_06265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV29141.1"
                     /translation="MRDPSQGPIRLLLVEDNPGDARLVQLLLAEVGGFRLDCVGTLKE
                     AVSHLAAHPAEAVLLDLSLPDSHGLGTIDTMRAAAPELPLIVFTGLDDEAMGRAAVQR
                     GCQDYLVKGQGDGHLIRRTVTYSIERKAVEDERRRAAEHLKRVLVQTVRAVSLTLEMR
                     DPYTAGHQRRVAQLAVSIGQRLGLDPERLEGLHTGALIHDIGKINVPAEFLSRPGKLS
                     TDALAIIRSHPGVGSEIVADIEFPWPVAQMIAQHHERLDGTGYPLGLKGDEIILEARI
                     VAVADVVEAMASHRPYRPSLGVDAALQEIQDGAGTRFDPEVVRLCVEIFRDNGITALD
                     TGEDLPLAM"
     gene            complement(1610..2782)
                     /locus_tag="VLL76_06270"
     CDS             complement(1610..2782)
                     /locus_tag="VLL76_06270"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HSV29142.1"
                     /translation="MTTTTRTLLSGMLACAVALGLGRFAFTPILPLMQAEHGFGTAVA
                     GWLAAANNLGYLVGALWAGMVTSDAARHRLLGWGLAILVVTLGLMAVTDSMLAWNLIR
                     GIAGVASAWVFVLASALVVPRLAELGHAKLSGWHFGGVGLGIAVAGIFVGLTGSAIGS
                     VGGWIGAALIALAFAAYAWPALRDAHAAQANAAAPPPPVAFPLSLLAAAYFFEGMGYI
                     VTGTFLVAMIKASPELRPLADLAWVLVGLAALPSAAAWSWLAAHRGFLFALVAAHVVQ
                     TLGVALPALSSSAPAVLLGAVMYGGTFLGIVGMALAFGRAITPATPARTMGLLTAAFG
                     IGQIIGPVVAGWLAEGGDWAPALWFAAASVAAGTPLLLAGRWVTSRGAGLRRYPAR"
     gene            complement(2949..>3699)
                     /gene="lysK"
                     /locus_tag="VLL76_06275"
     CDS             complement(2949..>3699)
                     /gene="lysK"
                     /locus_tag="VLL76_06275"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385969.1"
                     /note="class I; LysRS1; catalyzes a two-step reaction,
                     first charging a lysine molecule by linking its carboxyl
                     group to the alpha-phosphate of ATP, followed by transfer
                     of the aminoacyl-adenylate to its tRNA; in Methanosarcina
                     barkeri this enzyme charges both tRNA molecules for lysine
                     that exist in this organism (but the tRNALysUUU very
                     poorly) and in the presence of LysRS2 can charge tRNAPyl
                     with lysine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HSV29143.1"
                     /translation="LTYELFLDDQGQKISKSKGNGLAVEDWLKYAPQESLALFMYQKP
                     KAAKRLYFDVIPRAVDDYLTYLQKFESDELQKRLDSPAWHIHNGNPPKEEAHLSFSIL
                     LNLAGVCNADDKSVLWGFIQRYAPGAAPETAPILDGLAGYAVAYYRDFVKPNKKYRKA
                     TPDEAQAFADLAARLRELPPDASAEDLQNVVYEIGKRDAFPEMKAWFKANYEVLLGQE
                     QGPRMGSFIKLYGIENTVALLDKAAAGEAME"
BASE COUNT          629 a         1263 c         1260 g          547 t
ORIGIN      
        1 gcaagaagaa ggggtgaggc acgggcggcc gccgccttgg gtgaaagatc cttcggctgc
       61 gcctcaggat gacaacaagg tcctgtcatg ctgagcgcag cgaagcatct ttcaggcacg
      121 ggcggccgcc gccttggttg aaagatcctt cggcttcgcc tcaggatgac aacaccccac
      181 cccgtcattc ttttgccacg cgccttcgct agcatccgct gataccacgg ccctaaggcc
      241 aatcagcgga ttccaggatg atcaagcttc ttaccctttg cctcgccgtc ttcgccgtgc
      301 tcgcggcgac caatcccagg caggacgatc atgcccgcaa gctggtcgag catgcccagc
      361 agggctgtgc cgagaacccg ctgggcaagc tgttgtgcgg cggcatggcc gcactggcca
      421 gccccaccat cgactatcgc gaccacgttg tgttctccac cgcgcgcttg ggcgagtccg
      481 agactttggg cgtgctgggc aaggtcatgg tgatcggcgg ataggacccg cgacttcctc
      541 atgggccggc ccgaaaggtt gcatgtcaaa gggggtagag gacggcgtag actcgggcat
      601 tgggatcacg gaggttccgt catgagagat ccatcacagg gtccgatccg cctcctgctg
      661 gtcgaagaca atccgggcga cgcccgcctc gtgcagttgc tgctggccga ggtcggaggg
      721 ttccggctcg actgcgtcgg cacgctgaag gaagccgtct cgcacctcgc cgcccatccg
      781 gccgaggcgg tgctgctcga cctgtcgctg cccgattcgc acggcctggg cactatcgac
      841 accatgcggg cggccgcgcc cgaattgccg ctgatcgtct tcaccggcct cgacgacgag
      901 gccatggggc gggccgccgt gcagcgcgga tgccaggatt acctggtcaa gggccaaggc
      961 gacggccatc tgatccgccg caccgtcacc tattccatcg agcgcaaggc ggtcgaggac
     1021 gaacgccgcc gcgccgccga gcacctcaag cgggtgctgg tgcagaccgt ccgggcggtg
     1081 tcgctgaccc tggaaatgcg cgatccctac acggccggcc accagcgccg ggtggcgcaa
     1141 ttggcggtgt ccatcggcca gcgcctgggc ttggaccccg agcggctgga ggggctgcac
     1201 accggcgcgc tgatccacga catcggcaag atcaacgtgc ccgccgaatt cctcagccgg
     1261 ccgggcaagc tgtcgacgga cgcgctcgcc atcatccgct cgcatcccgg cgtcggctcc
     1321 gagatcgtcg cggacatcga gttcccctgg ccggtggcgc agatgatcgc ccagcaccac
     1381 gagcggctgg acggcaccgg ctatcccctg gggctgaagg gcgacgagat catcctcgag
     1441 gcccgcatcg tggcggtcgc cgacgtggtc gaggccatgg cctcgcaccg gccctatcgg
     1501 ccgtcgctgg gcgtcgatgc agcgctgcag gagatccagg acggcgccgg cacccgcttc
     1561 gaccccgagg tggtgcggct gtgcgtcgag atcttccgcg acaacggcat caccgcgctg
     1621 gataccggcg aagacctgcc cctcgcgatg tgacccagcg ccccgccagc agcagcggcg
     1681 tgccggcggc caccgaggcg gcggcgaacc acagcgccgg cgcccagtcg ccgccctcgg
     1741 ccagccagcc ggccaccacc ggcccgatga tctggccgat gccgaacgcg gcggtcagca
     1801 ggcccatggt gcgggcgggc gtcgccgggg tgatggcgcg gccgaaggcc aaggccatgc
     1861 cgacgatgcc cagaaaggtg ccgccataca tcaccgcccc cagcaacacc gccggggccg
     1921 acgacgacaa ggcgggcagg gcgacgccca gcgtctgcac cacgtgggcc gcgaccaggg
     1981 cgaacaggaa gccgcgatgg gcggccagcc acgaccatgc ggcggccgag ggcagcgcag
     2041 ccagcccgac cagcacccag gccaggtcgg ccagcgggcg cagctcgggg ctagccttga
     2101 tcatggcgac caggaaggtg ccggtgacga tgtagcccat gccctcgaag aaataggcgg
     2161 cggccagcag cgacagcggg aacgccaccg gcggaggcgg cgcggcggcg ttggcctggg
     2221 cggcatgggc gtcgcgcagg gccggccagg cataggcggc gaaggccagg gcgatcagcg
     2281 cggcgccgat ccatccgccc accgacccga tcgccgaacc ggtcaggccg acgaagatgc
     2341 cggccaccgc gatgcccagg ccgacgccgc cgaaatgcca gcccgacagc ttggcatggc
     2401 ccaactcggc caaacgcggc accaccagcg ccgaggccag cacgaacacc caggccgagg
     2461 cgacgccggc gatgcctcgg atcaggttcc acgccagcat ggaatctgtg accgccatca
     2521 ggcccagcgt gaccaccagg atcgccaggc cccagcccag caatctgtgg cgcgccgcgt
     2581 ccgacgtcac catgcccgcc cacagggcgc cgaccagata gcccaggttg ttggccgccg
     2641 ccagccagcc ggcgacggcg gtgccgaagc catgctcggc ctgcatcagc ggcaggatgg
     2701 gggtgaaggc gaaccgcccc agccccagcg ccaccgcgca ggccagcatg ccgctgagaa
     2761 gggtgcgcgt ggtcgtggtc atggtgcgag gatgcgcgaa aagacggggg aacgccaacc
     2821 gacgaaatgg ttgggggcga tttgcgtgtt gtcatcctga ggcgcagccg aaggatcttt
     2881 cagccgacgt ggcggccgcc tgtgcgtgaa agatgcttcg ctgcgctcag catgacaaag
     2941 tggccgtcct actccatcgc ctcgccggcc gccgccttgt ccagcagcgc aaccgtgttt
     3001 tcgatcccgt agagcttgat gaagctgccc atgcgggggc cctgctcctg gcccagcagg
     3061 acctcgtaat tggccttgaa ccacgctttc atctcgggga aggcgtcgcg cttgccgatt
     3121 tcgtagacca cgttctgcag gtcctcggcc gaggcgtcgg gcggcaattc gcgcaagcgg
     3181 gcggccaaat cggcgaaggc ctgggcctcg tcgggcgtcg ccttgcggta cttcttgttg
     3241 ggcttcacga agtcgcgata gtaggccacg gcatagccgg ccagcccgtc gaggatgggg
     3301 gcggtttccg gcgcggcgcc cggcgcgtag cgctggatga agccccacag caccgatttg
     3361 tcgtcggcgt tgcagacgcc ggccaggttc agcaggatgc tgaacgacag atgcgcctct
     3421 tccttcggcg ggttgccgtt gtggatgtgc cacgccgggc tgtccaggcg cttctgcagt
     3481 tcgtccgatt cgaacttctg cagataggtc agataatcgt cgacggcgcg cgggatgacg
     3541 tcgaaataca gccgcttggc cgccttgggc ttctggtaca tgaacagcgc cagcgattcc
     3601 tggggggcgt atttcagcca atcctcgacg gcgaggccgt tgcccttgga cttcgagatc
     3661 ttctggccct ggtcgtccag gaacagttcg taggtcagg
//
LOCUS       DATIKR010000395         1856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_17541, whole genome shotgun sequence.
ACCESSION   DATIKR010000395 DATIKR010000000
VERSION     DATIKR010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17541"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1842)
                     /locus_tag="VLL76_06280"
     CDS             complement(<1..1842)
                     /locus_tag="VLL76_06280"
                     /inference="COORDINATES: protein motif:HMM:TIGR01643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat domain-containing protein"
                     /protein_id="HSV29144.1"
                     /translation="MTTYTYGESGSPVPTNSQLVAIQYPQGSTGSGLVEMTYHADGSL
                     ATRTDPRGVTLTFTYDDAYRRTEQTVSGTVPGDTKVEYTYTALGQPETITTSAGQAAT
                     SVVEYTYNGFGQIESESLDLDGDGPLPARTITYDYSGGSFSLLTGLTYPNGRQISYAY
                     GATTAGHYPGSSAAGAAFGRIAEILDGDGQTAAPLAAYAYTGMNHMVARWHDHGHVAQ
                     AQAYDAFGRVTQVRHGGFDGQQGLPTDAGETTYAGSTYGYDLAGNRVFDKPLRMPAHG
                     QAYQYDDLNRLVKATRGVLDGDHQVAAPYASPRTVDPTYDLLGNFLSDRLNSHVETRE
                     HNLANEITKRSVDPADDGVVDPGPALYLDETFGGTDPLDNWDIIAGAFSAGGGVATCD
                     TVAAATGVPWSPQAKGLMLVEGLTNLTDIAVTAKVVLPERGTRAGIVFGYQDADNYWV
                     CLLHWPSSGWPTVGIYQVEAGTWTARHGPHGRPVTITANTPVTFCLRVQGQGVSAFVV
                     GQTVPRGPTQYAATGVLPGRVGVLAGQADIEFDDVRVQRADWSAPASPTWAVYRGTFA
                     LDGDEATLAPTVGESLNLAVRQGTYGKDYDIEVRLAGVGAGLAFHVQD"
BASE COUNT          234 a          608 c          710 g          304 t
ORIGIN      
        1 gtcctggacg tggaaggcca ggcccgcccc gacgccggcc agccggacct cgatgtcgta
       61 gtccttgccg taagtgccct ggcggaccgc caggttcagc gactcgccca cggtcggggc
      121 cagcgtggcc tcgtcgccgt ccagggcgaa cgtgccgcgg tagacggccc aggtggggct
      181 ggccggggcc gaccagtccg cccgctggac ccgcacatcg tcgaactcga tatccgcctg
      241 gcccgccagc acgcccaccc ggccgggcaa gacgcccgtg gcggcgtact gcgtcggccc
      301 tctcggcacg gtctggccga ccacgaaggc ggagaccccc tggccctgga cccgcagaca
      361 gaacgtcacc ggcgtgttgg ccgtgatcgt caccgggcgg ccgtgcggcc cgtgccgcgc
      421 ggtccaggtg ccggcctcga cctggtagat ccccacggtc ggccagccgc tggacggcca
      481 gtgcagcagg cagacccagt agttgtcggc atcctggtag ccgaagacga tgccggcccg
      541 ggtgccccgt tccggcaaga cgaccttggc cgtcaccgcg atgtcggtca gattggtcag
      601 gccctcgacc agcatcaggc ccttggcctg cgggctccag ggcacgcccg tggcggccgc
      661 gaccgtgtcg caggtggcta cgccgccgcc ggcgctgaag gcgccggcga tgatgtccca
      721 gttgtccagc ggatctgtcc cgccgaacgt ctcatccagg tagagcgcag ggccgggatc
      781 gaccacgccg tcgtcggccg gatcgacgct gcgcttcgtg atctcgttgg ccaggttgtg
      841 ctctctggtt tccacgtggc tgttcagcct atcggacagg aagttgccga gcaagtcgta
      901 ggtcggatcg accgtccgcg ggctggcgta gggggccgcc acctggtggt cgccgtccag
      961 cacgccgcgg gtggccttga ccagccggtt gaggtcgtcg tactggtagg cctggccgtg
     1021 ggcgggcatc cgaagcggct tgtcgaagac ccggttgccg gccagatcgt agccgtaggt
     1081 gctgccggcg taggtggtct cgccggcgtc ggtgggcagg ccctgctggc cgtcgaagcc
     1141 gccgtggcgg acctgggtga cccggccgaa ggcgtcgtag gcctgggcct gggcgacgtg
     1201 gccgtggtcg tgccagcggg ccaccatgtg gttcatgccg gtgtaggcat aggcggccag
     1261 gggcgcggcg gtctggccgt cgccgtccag gatctcggcg atgcggccga aggcggcccc
     1321 ggcggcgctc gagccgggat agtggccggc ggtggtcgcg ccgtaggcgt agctgatctg
     1381 ccggccgttg ggataggtca ggccggtcag cagcgagaaa ctgccgccgc tgtagtcgta
     1441 tgtgatggtg cgggccggca gcgggccgtc gccgtcgagg tcgagcgatt cggactcgat
     1501 ctggccgaag ccgttgtagg tgtactcgac gacgctggtg gcggcctgac cggcggaggt
     1561 ggtgattgtc tcgggctggc cgagggcggt gtaggtgtac tcgaccttgg tgtcgccggg
     1621 gacggtgccg ctgacggtct gctcggtgcg gcggtaggca tcgtcgtagg tgaaggtcaa
     1681 cgtcaccccc cgcgggtcgg tgcgggtggc cagggagccg tcggcgtggt aggtcatctc
     1741 caccagcccg ctgccggtgc tgccctgcgg gtactggatc gcgaccagct ggctgttggt
     1801 cggcacgggc gagccggact cgccataggt gtaggtggtc acctgattgg cccccg
//
LOCUS       DATIKR010000396         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_29888, whole genome shotgun sequence.
ACCESSION   DATIKR010000396 DATIKR010000000
VERSION     DATIKR010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29888"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1481)
                     /locus_tag="VLL76_06285"
     CDS             complement(<1..1481)
                     /locus_tag="VLL76_06285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSV29145.1"
                     /translation="MTAEAPLRLDPNDRVVSPREMVGFLAMVFGMFMAILDIQIVASS
                     IAQIQAGISASADEVSWVQTAYLIAEVVMIPLSGWVARVVSIRLLFFVSCVTFTLASA
                     LCAASWSIESMIVFRAVQGFLGGAMIPTVFSTAFLLFPPRKQASVAIVIGLVATMAPT
                     IGPTLGGWLTEAMSWHWLFLVNVLPGTIVAVVVLTCARPERPRLDMLKGFDLAGIVLV
                     AVFLGSLQFVLEEGPGDDWFDEPRIVLFSAICAIAAVAFVWRELTVKNPVIDLWAFAD
                     RNFAVGCLYSFIIGVGLYGSVYVIPLYLGRVRGYSALEIGITMMVVGLFQLLSAPLAG
                     RLAGKVDLRLMLAAGLALFGAGLWLNSALTSEWGYWELFLPQAVRGLSLMFCFVPINT
                     VALGHLPPDEVQNASGLYNLMRNLGGAIGLAAITTLLGTRTDLHYARLSEALTWDNLE
                     AVLRFDSLAARFDTLIPGDPQQAALKMLAQLTKREAMTMAYGDV"
     gene            complement(1478..>1865)
                     /locus_tag="VLL76_06290"
     CDS             complement(1478..>1865)
                     /locus_tag="VLL76_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSV29146.1"
                     /translation="PVDGVIGNRVVRAGMYVRPGQHLLSVVPLATVWVDANYKETQIG
                     RMVPGNRAVITVDAFPGVEVEGRVAGFSPASGAKFSLLPPENATGNFTKIVQRVPVRI
                     ELPAGHALAGRLRPGLSVVARVDVRP"
BASE COUNT          355 a          626 c          651 g          233 t
ORIGIN      
        1 acgtcgccat aggccatggt catggcctcg cgcttggtca gttgcgccag catcttcagc
       61 gccgcttgct gcgggtcgcc ggggatcagg gtgtcgaagc gggcggccag gctgtcgaag
      121 cgcagcacag cctccagatt gtcccaggtc agcgcctcgg acaggcgggc gtagtgcaga
      181 tcggtgcggg tgcccagcag cgtggtgatg gcggccaggc cgatggcgcc gcccaggttg
      241 cgcatcaggt tgtacaggcc cgaggcgttc tgcacctcgt cgggcggcaa atggcccagc
      301 gccacggtgt tgatgggcac gaagcagaac atcagcgaca ggccgcgcac ggcttggggc
      361 aggaacagct cccaatagcc ccattcgctg gtcagcgccg aattcagcca cagcccggcg
      421 ccgaacagcg ccaggccggc ggccagcatg aggcgcaggt ccaccttgcc ggccagcctg
      481 ccggccaagg gcgccgacag caactggaac aggccgacca ccatcatggt gatgccgatc
      541 tccagcgccg aatagccgcg cacccggccg agatagagcg ggatgacgta gaccgagccg
      601 taaaggccga cgccgatgat gaagctgtag aggcagccca ccgcgaaatt gcggtcggcg
      661 aaggcccaca aatcgatcac cgggttcttc acggtcagct cgcgccacac gaaggccacc
      721 gccgcaatgg cgcagatcgc cgagaacagc acgatgcggg gctcgtcgaa ccagtcgtcg
      781 ccggggcctt cctccagcac gaattgcagc gagcccagga acaccgccac cagcacgatg
      841 ccggccagat cgaagccctt cagcatgtcg aggcggggcc tttccggccg ggcgcaggtc
      901 agcaccacca cggccacgat ggtgccgggc agcacgttga ccaggaacag ccaatgccac
      961 gacatcgcct cggtcagcca gccgcccaaa gtggggccga tggtgggggc catggtggcg
     1021 accaggccga tgacgatggc gacgctggcc tgcttgcgcg gcgggaacag caggaaggcg
     1081 gtggagaaca cggtagggat catggcgccg cccaggaagc cctgcacggc gcggaacacg
     1141 atcatggatt cgatgctcca cgacgcggcg cacagggcgc tggccagggt gaaggtgacg
     1201 caggacacga agaacagcag gcggatcgac accacccggg cgacccagcc cgacagcggg
     1261 atcatcacca cctcggcgat cagataggcg gtctggaccc acgacacctc gtcggccgag
     1321 gccgagatgc cggcctggat ctgggcgatg gaactggcga cgatctggat gtcgaggatc
     1381 gccatgaaca tgccgaacac catggccagg aaccccacca tctcgcgcgg gctgaccacg
     1441 cggtcgttgg ggtccaggcg caacggcgcc tcggcggtca tggccgcacg tccacccgcg
     1501 ccaccaccga cagtccgggc cgcaggcggc cggccagggc gtggccggcg ggcagctcga
     1561 tgcggacggg gacgcgctgc acgatcttgg tgaagttgcc ggtggcgttc tcgggcggca
     1621 gcaggctgaa cttggcgccc gaggcgggcg agaagccggc cacccggccc tcgacctcga
     1681 cgccggggaa ggcgtcgacc gtgatgacgg cgcgattgcc cggcaccatg cggccgatct
     1741 gggtttcctt gtaattggcg tcgacccaca cggtcgccag cggcaccacc gacagcaggt
     1801 gctggccggg gcgaacgtac atgccggccc gcaccacccg gttgccgatg acaccgtcca
     1861 ccggg
//
LOCUS       DATIKR010000397         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_126925, whole genome shotgun sequence.
ACCESSION   DATIKR010000397 DATIKR010000000
VERSION     DATIKR010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126925"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..139
                     /locus_tag="VLL76_06295"
     CDS             <1..139
                     /locus_tag="VLL76_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007030207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNase H family protein"
                     /protein_id="HSV29147.1"
                     /translation="LEQAASRHDVTWHWVRGHAGHPENERADELARRGAKQAAGIKKS
                     D"
     gene            257..1642
                     /gene="otsA"
                     /locus_tag="VLL76_06300"
     CDS             257..1642
                     /gene="otsA"
                     /locus_tag="VLL76_06300"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003825 - alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming)"
                     /protein_id="HSV29148.1"
                     /translation="MPRLVVVSNRVDVPKKGAKAGGLAVALRETLEKLGGVWFGWSGE
                     VCEDEPPAKVTTLGRVTYVTTDLNQRDYDEFYNGFSNSTLWPLFHYRLGLLEVSRKSY
                     AAYLRVNARFAAALAPLLRPDDIVWVHDYHLIPLGDELRKRGVTNRMGFFLHTPFPVP
                     ELLVALPGHRRLVQALCAYDLCGFQTQDDVRAFLGYVSGEAHGEVGEAGRFAAYGRCA
                     RAKAYPIGIDTDTFAQMAKDRAESLETRRLRSSLRGRKLILGVERLDYSKGLPHRFDA
                     VEHLLETRPELKGSFEFMQIAAPSREDVARYRTLKRQLESAAGRINGRFSDFDWQPIR
                     YINKGYARSTLAGFYRAACIGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSRFAGAA
                     RELKTALVVNPFDMDEMAEALAQALTMPQEERIERWQAMMAVVRGNTVTHWRDAYLAD
                     LTEGIEAVEVA"
BASE COUNT          275 a          553 c          554 g          269 t
ORIGIN      
        1 gctggagcag gcggcgtcgc gccacgacgt cacctggcac tgggtgcgcg gccatgccgg
       61 ccaccccgag aacgagcgcg ccgacgaact ggcccgccgg ggcgccaagc aggccgccgg
      121 catcaagaaa tccgattagg catattcacg tattcgatac attggtcgcg gctgctacga
      181 tcgggctacc gcgcccatcc accttggtca ccatgggcgc aggggccact tcaggtccga
      241 acccaaggag gacccggtgc cgagactggt ggtggtatcc aatcgcgtgg acgtgccgaa
      301 gaagggggcg aaggctgggg ggcttgcggt cgcgctacgg gaaacgctgg aaaagctggg
      361 cggtgtttgg ttcggctggt ccggcgaggt gtgcgaggac gaaccgccgg ccaaggtgac
      421 cacattgggc cgcgtcacct atgtcaccac cgatctcaac cagcgcgact atgacgaatt
      481 ctacaacggc ttctccaact cgacgctgtg gccgctgttc cattaccggc tgggcctgct
      541 ggaggtctcg cgcaagagct atgcggccta tctgcgcgtc aacgcccgct tcgccgccgc
      601 cttggcgccg ctgctgcggc ccgacgacat cgtgtgggtg cacgattacc atctgatccc
      661 gctgggcgac gaattgcgca agcgcggcgt gaccaaccgc atgggcttct tcctgcatac
      721 gcccttcccg gtgccggaat tgctggtggc gctgcccggc caccgccggc tggtgcaggc
      781 gttgtgcgcc tatgatctgt gcggcttcca gacccaggac gacgtccgcg ccttcctcgg
      841 ctatgtcagc ggcgaggcgc acggcgaggt cggcgaggcc gggcgcttcg ccgcctatgg
      901 ccgctgtgcc cgcgccaagg cctatcccat cggcatcgac accgacacct tcgcccagat
      961 ggccaaggac cgcgccgaat cgctggaaac ccgccgcctg cgctcgtcgc tcagggggcg
     1021 caagctgatc ctgggggtgg aacggctgga ttattccaag ggcctgccgc accgcttcga
     1081 cgccgtcgag catctgctgg aaacccggcc ggaactcaag ggcagtttcg agttcatgca
     1141 gatcgccgcg ccgtcgcgcg aggacgtggc ccgctaccgg accctcaagc gccagcttga
     1201 aagcgccgcc ggccgcatca acggccgctt ctcggatttc gactggcaac ccatccgcta
     1261 catcaacaag ggctatgccc gctcgaccct ggcggggttc taccgcgccg cctgcatcgg
     1321 cctggtgacg ccgctacgcg atggcatgaa tttggtcgcc aaggaatacg tggcggcgca
     1381 ggacccggcc aatcccggtg tgctggtgct gtcgcgcttc gccggcgccg cccgcgagct
     1441 gaaaacggcg ctggtggtca atccgttcga catggacgag atggccgagg ccctggccca
     1501 ggcgctgacc atgccgcagg aagaacggat cgaacgctgg caggccatga tggcggtggt
     1561 gcgcggcaac accgtcaccc attggcgcga cgcctatctg gccgacctga cggaaggcat
     1621 cgaggcggtc gaggtggcgt gacggcctcg g
//
LOCUS       DATIKR010000398         3961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_114594, whole genome shotgun sequence.
ACCESSION   DATIKR010000398 DATIKR010000000
VERSION     DATIKR010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114594"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VLL76_06305"
     CDS             <1..750
                     /locus_tag="VLL76_06305"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSV29149.1"
                     /translation="WPGTPLRSSSAKVFRAIDRRDGRVVAVKLFSPRGRLVDGRGYGA
                     DDWRARFLEEARSLAAIAHPHVVPVLDRGGEDGPNPWYAMPWMVANLRREIGRDAVAP
                     AAIARLAEHERPRAVTPARAVAVLAQVALGLAELHSRGIVHRDVKPSNLLLSARQGGA
                     VMLCDLGAARLPDLHSSRAGVWVGTPNYMAPEQREDSATASDRADVFSLGVLGYRLAV
                     GRLLNHAMAPDPADRPSATEMAAALAEMSLG"
     gene            826..1713
                     /locus_tag="VLL76_06310"
     CDS             826..1713
                     /locus_tag="VLL76_06310"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSV29150.1"
                     /translation="MDRIGKYVVHKVVLTTGYARIFLCHDPDLQVPVAVKVFDPRAGI
                     AGPLSPAQLLARFTVEARSLASFDHPYIVSVKAMEHLDDGRPYFVMPFQAAHLSYEIG
                     KDFADADAPERDQPRKVALPRALGLVKQLASALNALHRRGMVHRAVMPSNILLTAKEG
                     GVVKLADFSMVKLPERNPPLPDHWIGGTEYCAPEQRENATGVGPQADVYSLGVLAYRL
                     VTGGLPDTTIGAVELPDGPAELAELIRACTDPDPARRPAHGGAVLEAVAGVPVPAARK
                     PVQVVTLKKPMPKPVKATA"
     gene            complement(1710..3410)
                     /locus_tag="VLL76_06315"
     CDS             complement(1710..3410)
                     /locus_tag="VLL76_06315"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter-2 (CPA2)
                     family protein"
                     /protein_id="HSV29151.1"
                     /translation="MAEESASLLFEVLVLLAAAVLAVPLFHRLRIGPVLGYLVAGVVV
                     GPHVLGLIVEVEDIRRLGEYGVVFLLFAIGLELKLERLLAMKRLVFGLGGLQVLVTGL
                     VLASLVAALSRVGWSAAIVIGGGLALSSTAVVLQMLTERGELTDRHGRVAFAVLLMQD
                     LAVVPLLMMVSAMGGQGESPPLMMLKATGRALLVGAAIVVGGRLLVRPFLRVIAGTHS
                     SEVFAAAALLVVLGTAWLTQKAGLSMALGAFMAGLLLAETEFRHQVEADIQPFRGFLL
                     GLFFMTVGMGLDLPLLGRDFAMVVVLLLSLIAIKAAILTGLALLFRVGLATALHAGLL
                     LAQGGEFAFVVFGQAAAAGVVKPDALGPLTLAVTASMFATPLLAVVAGPLAARLSPRR
                     PDIGRLEDLAHIKDHVIVAGFGRVGRTVAAMLQRQGVTYVALDLSPERVLSARKRGLP
                     VYFGDSQRAEVLRAAGAERARALVLTLDTIAASERAMATIRERYPELRVYARARDRRH
                     GDALRDAGAVLAVPDAVEASLQLGALTLRALGTPPGDLDGLLQEIRHDNYAGLGSEES
                     "
     gene            3472..>3961
                     /locus_tag="VLL76_06320"
     CDS             3472..>3961
                     /locus_tag="VLL76_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV29152.1"
                     /translation="MPQTIPHSIPRAALVTGAARRIGREIALDLGRAGFAVAIHYSGS
                     ATEADAVAAEIIDDGGSAIAIQADLSREEEAAGLVEAAEKAVGPLGVLVNNASTFERD
                     EALTATRDSWDFHMEVNLRAPFVLTQDFARRLPKEAEGVVVNLLDQRVWNLTPHFTTY
                     TLS"
BASE COUNT          637 a         1445 c         1348 g          531 t
ORIGIN      
        1 tggcccggaa cacctttgcg cagcagcagc gcaaaggtgt tccgggccat cgaccgccgc
       61 gacggccggg tggtggcggt caagctgttc agtccgcgcg gccgattggt cgatggccgg
      121 ggctatggtg ccgacgattg gcgcgcccgc ttcttggaag aggcgcgcag cctggccgcc
      181 atcgcccatc cccatgtggt gccggtgctc gatcggggcg gcgaggacgg ccccaaccct
      241 tggtacgcca tgccctggat ggtcgccaac ctgcggcgcg agatcggccg cgacgcggtc
      301 gctcccgccg ccatcgcccg gctggccgaa cacgagcgtc cgcgcgcggt gaccccggcc
      361 cgcgccgtcg ccgtgctggc gcaggtagcc ttggggctgg ctgaattgca tagccgcggc
      421 atcgtccacc gcgacgtcaa gccatcgaat ttgttgctgt cggcccgcca aggcggcgcc
      481 gtgatgctgt gcgacctggg tgcggcgcgg cttcccgacc tgcattcgtc gcgggcgggg
      541 gtgtgggtgg gcacgcccaa ttacatggcg cccgagcagc gtgaggactc ggccaccgcc
      601 agcgaccgcg ccgacgtgtt ctcgctgggc gtgctgggct atcgcctggc cgtggggcgg
      661 ctgctcaacc acgccatggc gcccgacccc gccgaccggc cttcggccac ggaaatggcg
      721 gcggcgctgg cggaaatgtc gctcgggtga tgtcggcacc atcgaatggt gctagacttg
      781 ccgccgggat gaccgcccgc gggcgggtgt gagggaaggg gatcaatgga ccgcatcggc
      841 aagtacgtcg ttcacaaggt tgtgctcacc acgggctacg cccgcatctt cctgtgccac
      901 gatccggacc tgcaggtgcc ggtggcggtc aaggtgttcg acccccgcgc cggcatcgcc
      961 ggccccctca gtccggcgca attgctggcc cgcttcaccg tcgaggcgcg ctcgttggcc
     1021 agcttcgacc atccctacat cgtctcggtc aaggcgatgg agcatctcga cgacggccgg
     1081 ccgtatttcg tgatgccgtt ccaggccgct catctgtcct atgagatcgg caaggatttt
     1141 gccgatgccg atgctcccga gcgcgaccag ccgcgcaagg tggcgttgcc gcgcgccctg
     1201 gggctggtca agcaactggc gtcggcgctc aacgcgctgc accggcgcgg catggtccat
     1261 cgcgccgtca tgccgtccaa catcctgctg acggccaagg aaggcggcgt cgtcaagctg
     1321 gccgacttca gcatggtcaa gctgcccgag cgcaacccgc cgctacccga ccactggatc
     1381 ggcggcaccg aatattgcgc ccccgagcag cgcgagaacg ccaccggcgt cgggccgcag
     1441 gcggacgtct actcgctggg cgtgctggcc taccgcctgg tcaccggcgg cctgcccgac
     1501 accacgatcg gagcggtgga attgcctgac ggtccggccg aactggccga gctgatccgc
     1561 gcctgcaccg accccgaccc cgcccggcgt cccgcccatg gcggagcggt gctggaagcc
     1621 gttgccggcg tgccggtgcc ggcggcgcgc aagccggtcc aggtggtgac attgaagaaa
     1681 cccatgccca agccggtgaa ggcgacggcc taactttcct ccgatcccag cccggcgtaa
     1741 ttgtcgtggc ggatttcctg caacaggccg tccaggtcgc ccggcggggt gcccagggcg
     1801 cgcagggtca gggcgcccag ttgcaggctg gcctcgaccg cgtcgggcac cgccagcacc
     1861 gcgcccgcgt cgcgcagggc gtcgccgtgg cggcggtcgc gggcgcgggc gtacaccctc
     1921 agttcgggat agcgttcgcg gatggttgcc atggcgcgtt cggaagcggc gatggtgtcc
     1981 agcgtcagca ccagggcgcg ggcccgttcg gcaccggcgg cgcgcagcac ctcggcccgc
     2041 tgggaatcgc cgaaatagac cggcagcccc cgcttgcgcg ccgacagcac ccgttccggc
     2101 gacaggtcca gggcgacata ggtcacccct tgccgctgca acatggcggc gacggtgcgg
     2161 ccgacccgac cgaagccggc gacgatgacg tggtccttga tgtgggccag atcctccagc
     2221 cgcccgatgt ccggccggcg tgggctgagc cgggccgcca gcggccccgc caccacggcc
     2281 agcagaggcg tggcgaacat gctggcggtg acggccaggg tcagcggccc caaggcgtca
     2341 ggcttgacca caccggcggc ggcggcctgg ccgaacacta cgaaggcgaa ctcgccgccc
     2401 tgagccagca gcaggccggc atgcagcgcc gtcgccagcc ccacccggaa cagcagggcc
     2461 aggccggtca ggatggcggc cttgatggcg atcagcgaca acagcagcac caccaccatc
     2521 gcgaagtcgc gccccagcaa gggcaggtcc agccccatgc ccacggtcat gaagaacagg
     2581 cccagcagga agccccggaa gggctggatg tcggcttcga cctggtggcg gaactcggtc
     2641 tcggccagca gcaggccggc catgaaggcg cccaaagcca tggacagccc cgccttctgg
     2701 gtcagccagg cggtgcccag taccaccagc agggcggcgg cggcgaacac ctccgaggaa
     2761 tgggtgccgg cgatcacgcg caggaacggc cgcaccagca gccggccgcc gaccacgatg
     2821 gcggcgccga ccagaagggc gcggccggtg gccttcagca tcatcagggg cggcgattcg
     2881 ccctggccgc ccatggctga gaccatcatc agcagcggca ccaccgccag atcctgcatc
     2941 agcagtacgg cgaaggcgac gcggccgtgg cggtcggtca gctcgccgcg ctcggtcagc
     3001 atctgcagca ccacggcggt ggacgacagc gccaggccgc cgccgatgac gatggcggcc
     3061 gaccagccga cccgtgacag cgccgccacc agcgacgcca gcaccaaacc ggtgaccagc
     3121 acctgcagcc cgcccaggcc gaacaccagc cgtttcatgg ccagcagccg ctccagcttc
     3181 agttccagcc cgatggcgaa cagcaggaag accacgccgt attcgcccag cctgcggatg
     3241 tcctcgactt cgacgatcag acccaggaca tgcggcccca ctaccacccc cgccaccaga
     3301 tagcccagca ccggcccgat gcgcaggcgg tgaaacagcg gcacggccag caccgccgcc
     3361 gccagcagca ccagcacctc gaacagcagg gatgcgcttt cctcggccat gaccaggata
     3421 tgggcacgag gcgggcttgc gtcggcccac gcgcttcgtc atgattcatc catgccccag
     3481 acgatcccgc acagcatccc ccgcgccgcg ctcgtgaccg gcgccgcccg gcgcatcggc
     3541 cgcgaaatcg ctctcgacct cggccgcgcc ggcttcgccg tcgccatcca ttacagcggc
     3601 tcggcaaccg aggccgatgc cgtggccgcc gagatcatcg acgatggcgg ctccgcgatc
     3661 gccatccagg ccgacctgtc gcgcgaggag gaggccgccg ggctggtcga ggcggcggaa
     3721 aaggcggtgg ggccgttggg tgtgctggtc aacaacgcct cgaccttcga gcgcgacgag
     3781 gccctgacgg cgacccgcga cagctgggac ttccacatgg aggtcaacct gcgcgccccc
     3841 ttcgtgctga cccaggactt cgcccgccgc ctgcccaagg aagccgaggg cgtagtggtc
     3901 aacctgctcg accagcgggt ctggaacctg acgccccatt tcaccaccta caccctcagc
     3961 a
//
LOCUS       DATIKR010000399         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79000, whole genome shotgun sequence.
ACCESSION   DATIKR010000399 DATIKR010000000
VERSION     DATIKR010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79000"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..861)
                     /locus_tag="VLL76_06325"
     CDS             complement(91..861)
                     /locus_tag="VLL76_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSV29153.1"
                     /translation="MIRKTLAAALLTSALALTAGSAHAQKDQTLSPEQADAVRKVVRD
                     YLMEHPEVIVDAMEALREKMNAQAETEAKKAIAAHKEALFNGKDDPVGGNLKGDVTVV
                     EFFDYNCGYCKVVLDPLAEAVKTDRNVKVVYKEFPILSADSATASRVALAAKKQGKYE
                     EVHRAFMKFRGKLDEKTIFRLAGEAGANVDQLKKEMMAPEIDAQIKKNVELAHALNIG
                     STPTFVVGDRILPGAMEGQVFKQLFDITRKGGRLDGGK"
     gene            complement(950..>1564)
                     /locus_tag="VLL76_06330"
     CDS             complement(950..>1564)
                     /locus_tag="VLL76_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008612972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV29154.1"
                     /translation="RAKLFAFLEPPMRTFQRYRENDNSIDARYARAIAAYRKPDLATA
                     LPLIDGLIAERPDDPFFHELKGQMLFENGRGAEAVAPYRRAVELLPDSALLHIGLAQV
                     QIEQEDTATLAEAKKHLNLAVQREPGNRTAWRLLAIAHGRDGDEGMAAYAMAEEAILD
                     GRLPDANYHAGKAERLLPKSGPVWLRIQDIKEQAAQVKEERERR"
BASE COUNT          219 a          477 c          571 g          297 t
ORIGIN      
        1 aaagcggaac tcgcggctgc cacgtggatc gccgggtcaa gcccggcgat gacggggagg
       61 gggcggcagc gatgagttta ggttcccagc ctacttcccg ccgtccagac ggccgccctt
      121 gcgggtgatg tcgaacagct gcttgaagac ctggccttcc atggcgccgg gcaggatgcg
      181 gtcgccgacc acgaaggtgg gggtggagcc gatgttcagc gcgtgggcga gttcgacgtt
      241 cttcttgatc tgagcgtcga tctcgggcgc catcatctcc ttcttgagct ggtcgacgtt
      301 ggcgccggcc tcgcccgcca ggcggaagat cgtcttttcg tccagcttgc cgcggaactt
      361 catgaaggcg cggtgcactt cctcgtactt gccctgcttc ttggcggcca gggcaacgcg
      421 ggaggcggtg gccgaatcgg cgctgaggat ggggaattcc ttgtagacga ccttgacgtt
      481 gcggtcggtc ttcacggcct cggccaacgg gtccagcacc accttgcagt agccgcaatt
      541 gtaatcgaag aactcgacca cggtgacgtc gcccttgagg ttgccgccga ccggatcgtc
      601 cttgccgttg aacagggcct ccttgtgggc ggcgatggcc ttcttggcct cggtctcggc
      661 ctgggcgttc atcttctcgc gcagcgcctc catggcgtcg acgatgacct cggggtgctc
      721 catgagatag tcgcgcacga ccttgcgcac ggcgtcggcc tgctcgggcg acagcgtctg
      781 gtccttttgc gcgtgcgccg aaccggcggt cagggcgagg gccgaggtga ggagggcggc
      841 ggcaagggtc ttgcggatca taagcgttca ggctccacgc ggataaagcg agcgaatatt
      901 ggcggaagga agggccgggg gcaagccccg ggggcgcgct ctcgcctgat tagcggcgct
      961 ccctttcctc cttgacctgg gcggcctgct ccttgatgtc ctggatgcgc agccacaccg
     1021 ggccgctctt cggcagcagg cgctcggcct tgccggcgtg gtagttggcg tcgggcaggc
     1081 ggccgtccag gatggcttcc tcggccatgg cataggcggc catgccctcg tcgccatcgc
     1141 ggccatgggc gatggccaag aggcgccagg cggtgcggtt gcccggctcg cgctggacgg
     1201 cgaggttgag gtgcttcttg gcctcggcca gggtggcggt gtcttcctgc tcgatctgca
     1261 cctgggccag cccgatatgc agcagggcgc tgtcgggcag cagttcgacg gcgcggcgat
     1321 agggcgccac cgcttcggcg ccgcgtccgt tctcgaacag catctggccc ttgagttcat
     1381 ggaagaaggg gtcgtcgggc cgctcggcga tcaggccgtc gatcagcggc agggcggtcg
     1441 ccagatcggg cttgcgatag gcggcgatgg cgcgggcata gcgggcgtcg atggaattgt
     1501 cgttctcgcg gtagcgctgg aaggtgcgca tgggcggttc caggaacgcg aacagcttgg
     1561 cccg
//
LOCUS       DATIKR010000400         1553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79012, whole genome shotgun sequence.
ACCESSION   DATIKR010000400 DATIKR010000000
VERSION     DATIKR010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79012"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VLL76_06335"
     CDS             <1..461
                     /locus_tag="VLL76_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HSV29155.1"
                     /translation="SPIHTVARMVNPFDAPFQFNSVTHPPYLPVHQEAARLLGQKAMA
                     SFKGEGGEVERRPEKPCEVWYLADGEPAREDWPALVSGVREKEESLDLPRLKALWSGE
                     DADETAAATIAGTMAIALRYSGRAATVMEAEGMAQAMWRDRVKGKIPGAA"
     gene            458..>1553
                     /locus_tag="VLL76_06340"
     CDS             458..>1553
                     /locus_tag="VLL76_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HSV29156.1"
                     /translation="MTRRAPRIFISAAHKSSGKTTVTVGLAAALAARGLAVQTFKKGP
                     DYIDPLWLTAATGRPCRNLDFHTMPPRLIRETFERVGRGADISLIEGNKGLFDGVDLE
                     GEGSSAKLAEWLDAPVVLVVDTSGMTRGIAPLLLGYKAFDPNIRIAGVILNKVGGPRH
                     EKKLREVVAHYTGIPVLGAIQRAETMEIMERHLGLVPANEAEQAAAAIASLRDAVAGQ
                     VDLDALLALAADTSEVEAAPDLPPVPAPDLRIAVAKDAAFGFYYPDDFDALRAAGADL
                     VFIDTMTDAALPEVDGLFIGGGFPETQAAALEANASLRADIRAKAQAGLPIYAECGGL
                     MYLSRAIVWNGERREIVGVIPGEAVMHKRPK"
BASE COUNT          239 a          558 c          543 g          213 t
ORIGIN      
        1 gctcgcccat ccacacggtg gcgcgcatgg tcaatccgtt cgacgccccg ttccagttca
       61 actcggtgac ccacccgccc tatctgccgg tgcaccagga ggccgcgcgc ctgctgggcc
      121 agaaagcgat ggcgtcgttc aagggcgagg gcggcgaggt cgagcgccgg cccgagaagc
      181 cctgcgaggt gtggtacctg gccgacggcg aaccggcccg cgaggactgg cccgccttgg
      241 tgtccggcgt gcgcgagaag gaagaatcgc tggacctgcc gcgcctcaag gcgctgtgga
      301 gcggcgagga tgccgacgaa accgccgccg ccaccatcgc cggcaccatg gcgatcgcgc
      361 tgcgctattc cggccgcgcc gccacggtga tggaggccga gggcatggcc caggccatgt
      421 ggcgcgaccg cgtgaagggc aagatcccgg gggcggcgtg acccgccgcg ccccgcgcat
      481 cttcatttcg gcggcccata agtcgtcggg caagaccacg gtcacggtcg gcctggccgc
      541 cgcgcttgcg gcgcgcgggc tggccgtcca gaccttcaag aagggaccgg actacatcga
      601 tccgttgtgg ctgaccgccg cgacggggcg gccgtgccgc aacctcgatt tccacaccat
      661 gccgcccagg ctgatccgcg agaccttcga gcgggtcggc cggggcgccg acatcagcct
      721 gatcgagggc aacaagggcc tgttcgacgg cgtcgacctg gaaggcgaag gctcgtcggc
      781 caagctggcg gaatggctcg acgcgccggt ggtgctggtg gtggacacct cgggcatgac
      841 gcgcggcatc gccccgctgc tgctgggcta caaggcgttc gaccccaaca tccgcatcgc
      901 cggcgtgatc ctcaacaagg tcggcgggcc gcgccacgag aagaaactgc gcgaggtggt
      961 cgcccactac accggcatcc cggtgctggg cgccatccag cgcgccgaga ccatggagat
     1021 catggagcgc catctcggcc tggtgcccgc caacgaggcg gagcaggccg ccgccgccat
     1081 cgcctcgcta cgcgacgcgg tggccgggca ggtggacctc gacgccctgc tggcgctggc
     1141 cgccgacact tcggaggtcg aggccgctcc cgatctgccg cccgtgccgg cgcccgacct
     1201 gcgcatcgcc gtggccaagg atgccgcctt cggcttctat tatcccgacg atttcgacgc
     1261 cctgcgcgcc gccggggccg acttggtgtt catcgacacc atgacggatg ccgcgctgcc
     1321 cgaggtggac ggcctgttca tcggcggcgg cttccccgaa acccaggccg ccgcgctcga
     1381 ggccaacgcc agcctgcgcg ccgacatccg cgccaaggcc caggccggcc tgcccatcta
     1441 tgccgaatgc ggcggcctga tgtatctcag ccgcgccatc gtgtggaacg gcgagcgtcg
     1501 cgagatagtc ggcgtcatcc ccggcgaagc ggtgatgcac aagcggccga agg
//
LOCUS       DATIKR010000401         2477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_42718, whole genome shotgun sequence.
ACCESSION   DATIKR010000401 DATIKR010000000
VERSION     DATIKR010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42718"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2477)
                     /locus_tag="VLL76_06345"
     CDS             complement(<1..>2477)
                     /locus_tag="VLL76_06345"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV29157.1"
                     /translation="AAADLYLDILAIAPSSPAAHAGLGQALIGLQRLEEAEDQLERAL
                     GMDDENVVARLGRARLRLLEGDFPTALEDLEWRWQAPGQTRPEPPGDSWDGGPLDGKG
                     ILLWAEQGIDDTIQLARFVPRVAAMGGRVVLAVPAALVPLMRGLDGVAHVVASGDRLP
                     IRVEVNASLFDLPRLFGTSLSTIPADIPYLAPPAPAAIAAPPSALLKVGLAWGNGRRG
                     WSVPFGQLTPLLGLSGVAYFGLQLGPHAKDIAAMAHPALVTDLSPTIGDWADMAARIA
                     EMDVVVTVDGAVAHIAGALGKPVLLMLPFAPDWRWMLEREDSPWYPSIRLVRQDRPDD
                     WLGVVTRVMMDIEARVAAEAGRRAEAMRVHSGPRAALRAMLAGHLLPGDAFVDIGAGD
                     GTFTLDAAAHPSGDVRVLAIEAKRHEADMLADTIAISGAEELVEVVAVPVAGRAMPAV
                     VAKVPRGGRTVFPLPEWVDARTQTVAADSLLADRPHLAERRLIVRIGTKTEEGEVLDG
                     LWEALITHRAAVVLFEHRDGAVAADMLTQAGYRLFRFPSDLAGGPVKPFAGQPGPVLA
                     LASGTEPAAAYGDIGDPASPAALATARHDAAQLAAEGTRRMLAGDTGEAARLLTRALA
                     IDPVNVQANTNMGALLRRSGRAEAAAACWQRALAAGAGTGVRANLANVLRELGHGDEA
                     EALFLQILEAEPTNAALLYSLALLERERGRARESLALMERAETLHPSTLPGGEMAVAL
                     LKAGNLARGMADMAHRTLPDLPPAPAGAVEWNGERLDARTILVRDEGDVIDTIMLARY
                     VHQVGRQGGLVTVECVPEAARLMETLP"
BASE COUNT          361 a          869 c          930 g          317 t
ORIGIN      
        1 gggcagggtt tccatcaggc gggcggcctc gggcacgcat tccaccgtca ccaggccacc
       61 ctggcggccg acctggtgga catagcgggc cagcatgatg gtgtcgatga cgtcgccttc
      121 gtcgcgcacc aggatggtgc gggcgtccag ccgttcgccg ttccattcga cggcaccggc
      181 gggggcgggg ggcaggtcgg gcagggtgcg gtgggccatg tcggccatgc cacgcgccaa
      241 attgccggcc ttcagcagcg ccaccgccat ctcgccgccc ggcagggtgc tgggatgcag
      301 cgtctcggcc cgctccatca acgccagcga ttcgcgggcg cggccgcgtt cacgctccag
      361 cagcgccagg gaatagagca gggcggcgtt ggtcggttcc gcctccagaa tctgcaggaa
      421 cagggcttcc gcttcgtccc catgtccaag ctcgcgcagc acgttggcca ggttggcgcg
      481 cacgccggtg ccggcgccgg ccgccaatgc ccgctgccag caggcggcgg cggcttcggc
      541 gcggccgctg cggcgcagca gcgcccccat gttggtgttg gcctggacgt tgacggggtc
      601 gatggccagg gcgcgggtga gcaggcgggc tgcctcgccg gtatcgcccg ccagcatgcg
      661 gcgggtgccc tcggcggcca gttgcgcggc atcgtggcgg gcggtggcga gggcggcggg
      721 cgaggccgga tcgccgatgt cgccataggc cgccgccggt tcggtccccg acgccagcgc
      781 cagcaccgga ccgggttgcc cggcaaacgg cttgaccggg ccgccggcca ggtcggacgg
      841 gaagcggaag aggcgatagc cggcctgagt cagcatgtcg gcggcgacgg cgccgtcgcg
      901 atgctcgaac aatacgacgg cggcgcgatg ggtgatcagc gcctcccaca ggccgtccag
      961 cacctcgcct tcctcggtct tggtgccgat gcgcacgatc aggcggcgct cggccagatg
     1021 cgggcggtcg gccagcagtg aatccgccgc caccgtctgg gtgcgggcgt ccacccattc
     1081 cggcagcggg aagacggtgc ggccgccgcg cggcaccttc gcgaccacgg cgggcatggc
     1141 gcggccggcc accggcacgg cgacgacctc gaccaattcc tcggcgcccg agatggcgat
     1201 ggtgtcggcc agcatgtcgg cctcgtggcg cttggcctcg atcgccagca cgcgcacgtc
     1261 gcccgacgga tgggcggcgg cgtccagagt gaaggtgccg tcgccggcgc cgatgtcgac
     1321 gaaggcgtcg cccggcagca gatgcccggc cagcatggcg cgcagggccg ccctggggcc
     1381 ggaatggacg cgcatggctt cggcccggcg gccggcctcg gccgccaccc gcgcctcaat
     1441 gtccatcatc acccgcgtga ccacgcccag ccagtcgtcg gggcggtctt ggcgaaccag
     1501 acggatcgag gggtaccaag gcgaatcctc gcgctccagc atccagcgcc agtcgggggc
     1561 gaagggcagc atcagcagca ccggtttgcc aagcgctccg gcgatgtggg cgacggcgcc
     1621 gtcaaccgtc accaccacgt ccatctcggc gatgcgcgcg gccatgtcgg cccagtcgcc
     1681 gatggtgggc gacaaatcgg tgaccagcgc cggatgggcc atggccgcga tgtccttggc
     1741 gtgcggtccc aattgcaggc cgaaataggc gacacccgac aggcccagca gcggcgtcaa
     1801 ctggccgaac ggcacgctcc agccgcgccg accgttgccc caggccaaac caaccttgag
     1861 cagcgccgag ggcggtgccg cgatggccgc aggcgcgggt ggcgccagat aggggatgtc
     1921 ggcggggatg gtggacaacg aggtgccgaa caggcgcggc aggtcgaaca gcgaggcgtt
     1981 gacctcgacc cggatcggca ggcggtcgcc cgaggccacc acatgggcga caccgtccag
     2041 gccgcgcatc agcggcacca gcgccgccgg caccgccagc acgacccggc cgcccatggc
     2101 ggcgacgcgg gggacgaaac gggccagttg gatggtgtcg tcgatgccct gctcggccca
     2161 caacaggatg cccttgccgt cgagcggacc gccgtcccag gaatcgccgg gcggctcggg
     2221 gcgggtttgg ccgggcgcct gccagcgcca ttccaagtct tccaaggcgg tggggaagtc
     2281 gccttccagc aggcgcaggc gggcgcggcc aaggcgcgcg acgacgttct catcgtccat
     2341 gcccagcgcc cgctccaact ggtcttcggc ttcctcgagc cgctgcagcc cgatcaaggc
     2401 ctggcccaga ccggcatggg cggcggggct ggacggcgcg atggcgagga tgtcgaggta
     2461 gaggtcggcg gcggcgg
//
LOCUS       DATIKR010000402         2098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66811, whole genome shotgun sequence.
ACCESSION   DATIKR010000402 DATIKR010000000
VERSION     DATIKR010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66811"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..452
                     /locus_tag="VLL76_06350"
     CDS             <1..452
                     /locus_tag="VLL76_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018061994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSV29158.1"
                     /translation="IIVGEVRGPEAFDLLQAMNTGHDGSMGTIHANNPREAIARVENM
                     IAMGGYNLPSKVVREQIAGAVQVIVQATRQRDGSRKITHVTEVVGMEGDVVILQDLMV
                     YEFMGEDANGKIIGRHRFTGIRPAFWDKARYFGFERDLTEIMEMGER"
     gene            456..1355
                     /locus_tag="VLL76_06355"
     CDS             456..1355
                     /locus_tag="VLL76_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV29159.1"
                     /translation="MFGFNRRKRRIETVVGRVAGERLAKGDRANEAERKKAIQQKLKE
                     VEQKRSGQKKFRLSDAIAQAGLPISPLNFVLAVIGLAIAMGGLFYLMISPTMGAVGAL
                     LGGFALPRFFLKIRTKRRLARFTFLFADAIDIITRGIRSGLPLGECLKVIAKELPEPV
                     GSEFRAVNEGIRLGMTVEESLNRMSLRVPTAEVRFFAIVVGIQQQTGGNLADTLQKLS
                     DVLRGRKKMRDKIQAMSSEAKASAGIIGSLPVAVGGLLSIIAPDYIGLLFNTSTGNWM
                     LGIGAAVMGTGVLVMRGMINFEM"
     gene            1359..>2098
                     /locus_tag="VLL76_06360"
     CDS             1359..>2098
                     /locus_tag="VLL76_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV29160.1"
                     /translation="MPSFDPMVIFTVLSALAALAGVASVAITVLRKDKQAERMKAVTE
                     RRRALALQTADSMRAKGRAQPKKKKSATQELVEKFKLLQADTARDLKRKMAAAGWRDP
                     SAPAKFMAATLGLPLVLGLLAAINASGPMLANQSTAIRILVPVGAAALGFYLPRILLS
                     NAVQKRRVQIQKSFPDALDLMVICVEAGLSAEAAFNRVTEEMIGAAPELAEEFGLVAA
                     ELAFLPDRRMAYENLSERTGMPSMKSLST"
BASE COUNT          370 a          682 c          699 g          347 t
ORIGIN      
        1 gcatcatcgt cggcgaggtg cgcggacccg aggcgttcga cctgctgcag gccatgaaca
       61 ccggtcacga cggatcgatg ggcaccatcc acgccaacaa cccgcgcgag gccatcgccc
      121 gtgtcgagaa catgatcgcc atgggcggct acaacctgcc gtccaaggtg gtgcgcgaac
      181 agatcgctgg cgccgtccag gtcatcgtgc aggccacccg ccagcgcgac ggctcgcgca
      241 agatcaccca tgtcaccgag gtggtaggca tggagggcga cgtggtcatc ctgcaggacc
      301 tgatggtcta cgaattcatg ggtgaggacg ccaacggcaa gatcatcggc cgccaccgtt
      361 tcaccggcat ccgtccggcc ttctgggaca aggcccgtta cttcggcttc gagcgcgacc
      421 ttaccgaaat catggagatg ggggagcgct aggtaatgtt cgggttcaac cgccgcaagc
      481 gaaggatcga gacggtggtc ggccgagtgg ccggcgagcg gcttgccaag ggcgacaggg
      541 cgaacgaggc cgaacgcaag aaggcgatcc agcagaagct caaggaggtc gagcagaagc
      601 ggtcgggcca gaagaagttc cggctgtccg acgccatcgc ccaggccggc ctgccgatca
      661 gcccgctcaa cttcgtgctg gcggtgatcg gcttggcgat cgccatgggc ggcctcttct
      721 atctgatgat ctcgccgacc atgggggccg tcggggcgct gttgggcggc ttcgcgttgc
      781 cgcgcttctt cctgaagatc cgcaccaagc gccgtctggc gcgcttcacc ttcctgttcg
      841 ccgacgccat cgacatcatc acccgcggca tccgttccgg cctgccgctg ggcgagtgcc
      901 tgaaggtgat cgcaaaggaa ttgcccgagc cggtcggcag cgaattccgc gccgtcaacg
      961 agggcatccg cctgggcatg acggtcgagg aaagcctgaa ccgcatgtcg ttgcgggtgc
     1021 ccaccgccga agtgcgcttc ttcgccatcg tggtcggcat ccagcagcag accggcggca
     1081 acctggccga caccctgcag aagctgtcgg acgtgctgcg cggccgcaag aagatgcgcg
     1141 acaagatcca ggccatgtcg tccgaggcca aggcttcggc cggcatcatc ggttcgctgc
     1201 cggtggcggt gggtggcctg ctgtcgatta tcgcgcccga ctatatcggc ctgctgttca
     1261 acaccagcac aggcaactgg atgctgggca tcggcgccgc ggtgatgggc accggcgtgc
     1321 tggtcatgcg cggcatgatc aatttcgaga tgtagccgat gccgtccttc gaccccatgg
     1381 tgatcttcac ggtcttgtcg gcgctggcgg cgctggcggg cgtggcctcc gtcgccatca
     1441 cagtcctgcg caaggacaag caggccgagc gtatgaaggc ggtgactgag cgccgccgcg
     1501 cccttgcgct gcagacggcc gattccatgc gcgccaaggg ccgcgcccag ccgaagaaga
     1561 agaagtcggc gacacaggaa ctggttgaga aattcaagct gctgcaggcc gacaccgccc
     1621 gcgacctcaa gcgcaagatg gcggccgccg gttggcgcga tccctcggca ccggcaaagt
     1681 tcatggccgc gaccttgggc ttgccgctgg tgctgggatt gctggccgcg atcaatgcca
     1741 gcggcccgat gctggccaac cagagcaccg caatccgcat cctggtgccg gtcggcgccg
     1801 ccgcgctggg gttctatctg ccgcgcatcc tgctgtccaa cgcggtgcag aagcgccggg
     1861 tgcagatcca gaaatcgttt cccgacgcgc tggacttgat ggtgatttgc gtcgaggccg
     1921 gcctgtcggc cgaggcggcc ttcaaccgcg tcaccgagga aatgatcggc gccgcccccg
     1981 agctggccga ggaattcggt ctggtggcag cggaactcgc cttcctgccc gaccgccgca
     2041 tggcctacga aaatctgtcc gagcgcaccg gcatgccgtc catgaagtcg ctgtcgac
//
LOCUS       DATIKR010000403         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66831, whole genome shotgun sequence.
ACCESSION   DATIKR010000403 DATIKR010000000
VERSION     DATIKR010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66831"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            203..520
                     /locus_tag="VLL76_06365"
     CDS             203..520
                     /locus_tag="VLL76_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29161.1"
                     /translation="MVGGVGLNGGASDDRLNVHLAYTRTQRLTVTAGLSVVSKTANSA
                     QTAFDGFDASQVRLERQGDDAVIGFKGSSDTVTLRRIAGSEMYSLEFKGGDALRLDRV
                     FDA"
     gene            complement(522..935)
                     /locus_tag="VLL76_06370"
     CDS             complement(522..935)
                     /locus_tag="VLL76_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HSV29162.1"
                     /translation="MPADKLSIVVFSGDFDRVHYALVMASAAVATNTPVTLFFTMWAG
                     RALERGHGWQRMKASDGTPAEAMDAQFKQKGVGTFEELLEACVALGVKFMVCEMGLKA
                     LCMDPHALRPDVPVEAGGVVTFLADASKDGAMVFV"
     gene            complement(922..>1687)
                     /gene="moeB"
                     /locus_tag="VLL76_06375"
     CDS             complement(922..>1687)
                     /gene="moeB"
                     /locus_tag="VLL76_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HSV29163.1"
                     /translation="RHIILPEMGGVGQAKLLNSKVLVVGAGGLGSPVVLYLAAAGVGT
                     IGVVDDDVVDLSNLQRQVLHTTARVGVAKVDSAAQAVAAINPDVRVVPIRARLDRDNI
                     RAVIRDYDVVADGSDNFPTRFLVNDACRLEGKILVSAAILRFDGQLSTFKPDGPCYRC
                     IYQEEPPEGAVPTCSSAGVLGAIAGTMGSLQATEVLKELLGIGESMAGRLLIYDALGV
                     AFRNVRVKRDPGCPLCGDHPTITDLSAHGSTAHACG"
BASE COUNT          297 a          556 c          590 g          244 t
ORIGIN      
        1 tgccgtgcgg ccgggcatag gccacggcca aaggcgcggc ggccaggacg gcgacgaggg
       61 cgacggtacg gaacagggtt ttcatcgggg ggctccatgc ctgaacaaac ggtccccctt
      121 tatcgggcag cgctgtaaca ggccggtgtc gcggccgccg gaaattggta acggagtgta
      181 gcgcctcata ccaaaggcca ccgtggtcgg cggcgtcggc ctgaacggcg gcgccagcga
      241 cgatcgcctc aacgtccacc tggcctatac caggacccaa aggctgacgg tgacggccgg
      301 cttgagcgtc gtgagcaaaa ccgccaattc cgcccagacc gcgttcgatg gtttcgacgc
      361 aagccaggtt cggctggagc gccagggcga cgacgcggtg atcggcttca agggcagcag
      421 cgacaccgtc acgctgcgcc ggatcgccgg cagcgagatg tacagcctgg aattcaaggg
      481 cggcgacgcg ttgcggctgg accgggtgtt cgacgcctga actagacgaa caccatcgcg
      541 ccgtccttgc tggcatcggc caggaaggtg acgacgccgc cggcctcgac ggggacgtcg
      601 gggcgcaggg cgtgcgggtc catgcacagg gccttgaggc ccatctcgca caccatgaac
      661 ttgacgccca gggcgacgca ggcttccagc aattcctcga aggtgccgac gcccttttgc
      721 ttgaactggg cgtccatggc ctcggcggga gtgccgtccg acgccttcat gcgctgccag
      781 ccgtggccgc gttcaagcgc gcggccggcc cacatggtga agaacagggt gacgggggtg
      841 ttggtcgcca ccgccgccga cgccatcacc agggcgtagt ggacgcggtc gaagtcaccc
      901 gaaaagacca cgatcgacag cttatccgca ggcatgggcg gtgctcccgt gggccgacaa
      961 atcggtgatg gtgggatggt cgccgcatag cgggcagccg gggtcgcgct tgacccgcac
     1021 attgcggaac gcgacgccca gggcgtcgta gatcagcagg cggccggcca tggactcgcc
     1081 gatgcccagc aattccttga gcacctcggt ggcttgcagg ctacccatgg tgccggcgat
     1141 ggcgcccagc acgccggccg aggaacaggt cggcaccgca ccctcgggcg gttcctcctg
     1201 gtagatgcag cgatagcagg ggccgtccgg cttgaaggtg gaaagctggc cgtcgaagcg
     1261 caggatggcg gccgacacca gaatcttgcc ttccagccgg caggcgtcgt tgaccaaaaa
     1321 gcgggtgggg aagttgtcgg agccgtcggc gaccacgtcg tagtcgcgga tgacggcgcg
     1381 gatgttgtcg cgatccagcc gggcccggat cggcaccacg cgcacgtccg gattgatggc
     1441 cgccaccgcc tgggcggcgc tgtccacctt ggcgacaccg acacgggcgg tggtgtgcag
     1501 cacctggcgc tgcaggttgg acagatcgac cacgtcgtcg tccaccaccc cgatggtgcc
     1561 caccccggcg gcggccagat acagcaccac cggcgaaccc agtccgccgg cgcccaccac
     1621 cagcaccttg gagttcagca gcttcgcctg ccccacgccg cccatctcgg gcaggatgat
     1681 gtggcgg
//
LOCUS       DATIKR010000404         5728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_102816, whole genome shotgun sequence.
ACCESSION   DATIKR010000404 DATIKR010000000
VERSION     DATIKR010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5728
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102816"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..180)
                     /locus_tag="VLL76_06380"
     tRNA            complement(104..180)
                     /locus_tag="VLL76_06380"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(144..146),aa:Arg,seq:ccg)
     gene            complement(259..498)
                     /locus_tag="VLL76_06385"
     CDS             complement(259..498)
                     /locus_tag="VLL76_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29164.1"
                     /translation="MTCKICGAETADGTDHCGEPCRLKLECLRIAWDREARKVGVNGY
                     YDRRYQEHVRTNNTRGAKVIRNEWLDAKARLGERP"
     gene            754..2718
                     /locus_tag="VLL76_06390"
     CDS             754..2718
                     /locus_tag="VLL76_06390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29165.1"
                     /translation="MRRNSILCGTACAALLAAASAVAQVPQPPRVIDYPQEGVQLGTG
                     WHSQTASKTSSICVVFQEAHSQIGQQVVFDKAQVSDRYSLARSIDVSAEWHLKAGILA
                     SKTVDAKAHYASKTRIDESSLVVTELVTVDNGYAYAAPAAVESQKFGAALQGQSPMAH
                     DPAKTQRALGIDPRMVDAHAGQTLSAHIATAKSAKQRHNALGTGLNELYKAGGSTASS
                     VRLTDDMAALLKSNPGEFRRLCGDGFVAGIKQGGELAATYTFHTYSKSQQDDISAKLG
                     FKVNGIVSDYSGSVSVSRSIRQNNLNQKLSIDYFQQGGSGEPIPVTLDAIDAAVTSFA
                     GAVKTAPFNYKIVIVDYGTLPGGGGTLMADMSSFDKVTWEYAKAEQTYQTASDLLEAV
                     YTLEGAKWPQKAYLFGRWGYDKTDLQKVQANALTRLNQMKGLAQNCAAGNCTAPDVWD
                     DLAARIVFPLPIPDYNLTGSDQVELVRTLVGDPAWYTRQVTDYWIRRANSQRCQFDRD
                     PLFCKPDLAFNNVPDLIKTARPRLSLLFWQNCFGNSGGSVVYKSCSNDPTAKDVFYNE
                     LGQLQGDTNRNLCLTEDDKRHVSFRSCSEKGRNRWSFVQGRDGELYFKNSDTNLCISE
                     YETTICGVAPKPIRDAYKFKIRHALADKWP"
     gene            2772..4742
                     /locus_tag="VLL76_06395"
     CDS             2772..4742
                     /locus_tag="VLL76_06395"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29166.1"
                     /translation="MMGIVHLWRSAILATAIATLAGCGQHPGTGADSNAPRLSLSADR
                     IGIRPGVTASAIKSGFAALSQGDYAGANRVFGQALARDPRNAALHALNAVTYHIRYRA
                     GERDLFELAETGYRAALENQADFALAARQLARLYFEHGDFKRAKATALYAATLEPEDT
                     EAQALAAASAYHSGDLPLALWALGKGREQAPSDPALARMTPIIYGASGLTELAAGALP
                     AVTDAGEARRLARRLSQWQNFHQSAQAEAEPPPPEAAPRDEVAKEIDLSAPPPLAAAV
                     SDQGPVSYSWSDCQQQMAASQAGSYSGNSYNYGTTSAGSDETTALPALPAPCKGRPLP
                     RMAMIDAVMLRTDELQSTGHGINLLDGLTMFVSRSLTSTRSWGSAAGTKTNTVAGTIG
                     IGAAGTGGVLYTLNIFNATNNRAEIIARPSLLALDRQPAQFFSGSTVSVGLVSPLGGS
                     TLQDKPIGVSLSVTPTFIDDDTMLVNVKAARSFFEPLEETSTFAQSLQSSRNMVSASV
                     RMKFDETLILSGLSEREVTTNENRVPLLGDIPVVQNLFSHDERRDFTTSVLILLTPRR
                     VANFGDSLEASSRVYKLFATDDEPEAVREARRTALKELGGVWPNLVTTFSHMDRNKLF
                     KGIRTGDIRLEDWDEPSRLERIMLGVVEMLYR"
     gene            complement(4739..>5728)
                     /locus_tag="VLL76_06400"
     CDS             complement(4739..>5728)
                     /locus_tag="VLL76_06400"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSV29167.1"
                     /translation="DRVPGTFPLAQVLMVAVFLMSWDGFRRFLGRAPATPWRAGTVVA
                     VAMAPLAFGHLAGSQAMQSLIGSLEVATVTALIARELLWPPSAGRVAQRATGGVYVLT
                     VVFFLGRAVAIATSDRPEMVLLSDRYTSAALLWMLSLVLATTLGMALMTSERLQEELN
                     HQASRDPLTGALNRRAFALLAQKALARCRRQGEALAVLVMDLDHFKQINDRHGHAAGD
                     TYLCRFVAVAEQTLRAEDVVCRFGGEEFVALMPAASPAQALSAAERLRTAFADAVQSD
                     PTLPVAATVSIGIGALDGDESIEDLLQRADEALYLAKHNGRNRCELAQAVCPA"
BASE COUNT         1036 a         1945 c         1872 g          875 t
ORIGIN      
        1 ggattttgtc ttcttggtcc cgcggatcga agggggaaaa gtgccatgga tgcccgcctg
       61 cgcggacatt acggaagaga tggcagctga tgcttagaaa atttggcgca cccgacagga
      121 ttcgaacctg tgacctctgc cttcggaggg cagcgctcta tccagctgag ctacgggtgc
      181 agcatgcgcc gctgggggcg aaggggtgat atagcgcaag cgggcgcgga aggcaaaggg
      241 ggatgtggcc aagaccccct aaggccgttc gcccaggcgt gccttggcgt ccagccattc
      301 gttgcggatg accttggcgc cgcgggtgtt gttggtgcgg acgtgttcct ggtagcggcg
      361 gtcgtaatag ccgttgacgc ccaccttcct ggcctcgcgg tcccaggcga tgcgcaggca
      421 ttccagcttg aggcggcagg gctcgccgca atggtcggtg ccgtcggccg tctcggcgcc
      481 gcagatctta caggtcacgg gggagcctcc gtcggggtgg aggcccatgc ttagcagatc
      541 acgggcggcg atggcatggt catgttcggc gccccgccag agacgcgaat aagaacgact
      601 ccattgtatg catttcagat agcccaaaag gatgggttgg gctatgctgg cgtttcgatc
      661 agtcacttac tcacccgaag attggagccc tcgaattggc ttcgaaccaa ggttatcggg
      721 gctgactggg ctccctgtgg gaagggggta ccgatgaggc gaaattccat tctatgcggc
      781 acagcctgcg ccgccctgct tgccgccgcg tccgccgtgg cgcaagtgcc ccaaccgcca
      841 agggtcatcg actatccgca ggaaggcgtg cagcttggca ccggctggca ttcgcagacg
      901 gcgtccaaga cgtcgagcat ctgcgtcgtc ttccaggagg cgcattccca gatcgggcag
      961 caggtggtgt tcgacaaggc gcaggtgtcg gaccgctatt cgctggcgcg gtcgatcgac
     1021 gtgtccgccg aatggcacct caaggccggc atcctggcgt cgaagacggt ggacgccaag
     1081 gcgcattacg ccagcaagac ccgcatcgac gaatcatcgc tggtggtgac cgaactggtc
     1141 acggtggaca acggctacgc ctatgccgcc ccggcggcgg tggaatcgca gaaattcggc
     1201 gccgccctgc aagggcagtc gccgatggcc catgatccgg ccaagaccca gcgtgccctg
     1261 gggatcgacc ccaggatggt cgacgcccat gcgggccaga ccctcagcgc ccacatcgcc
     1321 acggccaaaa gcgccaagca gaggcacaac gccctcggca cgggcctcaa tgaattgtac
     1381 aaggccggcg gcagcaccgc gtcctcggtg cggttgaccg acgacatggc cgctctgctg
     1441 aagagcaacc ccggcgaatt ccggcggctg tgcggcgacg gcttcgtggc cggcatcaag
     1501 cagggcggcg aactggccgc gacctatacc ttccacacct attccaagtc ccaacaggac
     1561 gacatctcgg ccaagctggg gttcaaggtg aacggcatcg tgtccgatta ctcgggcagc
     1621 gtcagcgtca gccgcagcat ccggcagaac aatctgaacc agaagctttc catcgactac
     1681 ttccagcaag gcggttccgg cgagcccatc ccggtcaccc tggacgccat cgacgcggcc
     1741 gtgaccagct tcgccggcgc ggtgaagacg gcccccttca actacaagat cgtcatcgtc
     1801 gattatggga ccctgccggg cggcggcggc acgctgatgg ccgacatgag cagcttcgac
     1861 aaggtcacct gggaatacgc caaggccgag cagacctacc agacagcgtc ggacctgctg
     1921 gaggccgtct acacgctcga aggcgccaag tggccgcaga aggcgtatct gttcggacgc
     1981 tggggctatg acaagaccga cctgcagaag gtccaggcca acgccctcac ccgcctcaac
     2041 cagatgaagg gcctggccca gaactgcgcc gccggcaatt gcaccgcccc cgacgtgtgg
     2101 gacgaccttg ccgcccgcat cgtcttcccg ctgccgatcc ccgactacaa cctgaccggc
     2161 tcggaccagg tggaattggt gcggacattg gtgggcgatc ccgcctggta cacccggcag
     2221 gtcaccgatt attggatccg gcgcgccaac agccagcgtt gccagttcga ccgcgacccg
     2281 ctgttctgca agccggacct cgccttcaac aacgtgcccg atctgatcaa gacggcacgg
     2341 ccccggctat ccttgttgtt ctggcagaac tgctttggca atagcggggg aagcgtcgtt
     2401 tacaagtcat gctcgaacga tcccacggcc aaggatgtct tttacaacga actcggacaa
     2461 ctgcagggcg acactaatcg caacctgtgc ctgaccgagg acgacaagcg acacgtgagc
     2521 ttccgctcgt gcagcgagaa ggggcgcaac aggtggagct tcgtccaagg tcgcgatggc
     2581 gaactctatt tcaagaacag cgacaccaat ctgtgcatca gcgagtatga gacgaccatt
     2641 tgcggcgtcg ccccgaagcc gatccgcgac gcctacaagt tcaagatccg ccacgccttg
     2701 gcggacaaat ggccgtgaca tcctgcgacc ggggccggcc acgccggccc cgttctggtt
     2761 tttggggggg aatgatgggg attgtccacc tgtggcgcag tgcgatcctg gcgacggcca
     2821 tcgccaccct ggccgggtgc ggccagcacc ccggaacagg cgccgacagc aacgcccccc
     2881 gcctgagcct gtcggccgac cgcatcggga tacggccggg agtgaccgcc tcggccatca
     2941 agtccgggtt cgcggcgctg tcccagggcg attatgccgg ggccaaccgg gttttcggcc
     3001 aggccctggc ccgcgatccg cgcaacgcgg ccttgcatgc gctgaacgcc gtcacctacc
     3061 acatccgcta ccgcgccggc gaacgcgacc tgttcgagct ggcggaaacc ggctatcgcg
     3121 cagcgctgga aaaccaggcc gacttcgcgt tggcggcacg ccagcttgcc cgcctttatt
     3181 tcgagcacgg cgacttcaag cgcgccaagg cgaccgcgct ctatgccgcc accctggaac
     3241 ccgaggatac cgaggcccag gccttggcgg ccgcctcggc ctatcattcc ggcgacctgc
     3301 ccctggcctt gtgggcattg ggcaagggcc gcgagcaggc gccttccgat cccgcgctgg
     3361 cgcggatgac gcccatcatc tacggcgcca gcggcctgac cgaactggcg gccggcgccc
     3421 tgccggcggt cactgatgcc ggcgaggccc gccggctggc ccgccgactg tcgcaatggc
     3481 agaacttcca ccaatcggcc caggccgagg cggaaccgcc gccccccgag gcggcgcccc
     3541 gggacgaggt cgccaaggaa atcgacctgt cggcgccgcc ccccttggcg gcagcggtga
     3601 gcgaccaggg gccggtgtcc tattcatggt cggactgcca gcagcagatg gcggcgtcgc
     3661 aagcgggttc ctattcgggc aacagctaca actatggcac cacgtcggcc gggtccgacg
     3721 agaccactgc cctgcctgca ctgccggcgc catgcaaggg ccggccgctg ccgcgcatgg
     3781 ccatgatcga cgcggtgatg ctgcgcaccg acgaattgca gagcaccggc cacggcatca
     3841 acctgctgga cgggctgacg atgttcgtgt cgcgcagcct gacgtcgacc cgcagttggg
     3901 gcagcgccgc cgggaccaag accaacactg tggcggggac catcggcatc ggcgcggcgg
     3961 gcaccggcgg cgtgctctat acgctgaaca tcttcaacgc caccaacaac cgcgccgaga
     4021 tcatcgcccg ccccagcctg ctggccctgg accgccagcc ggcgcaattc ttctcgggat
     4081 cgacggtgag cgtcggcctg gtcagcccgc tgggcggcag cacgctgcag gacaagccga
     4141 tcggcgtcag cctgtcggtc acaccgacct tcatcgacga cgacaccatg ctggtcaacg
     4201 tcaaggcggc gcgctcgttc ttcgagccgc tggaagagac ctcgaccttc gcgcagtcgc
     4261 tgcaatcgtc gcgcaacatg gtctcggcca gcgtgcgcat gaagttcgac gagaccctga
     4321 tcctgtcggg cctcagcgag cgcgaggtca ccaccaacga aaaccgggtc ccgctgctgg
     4381 gcgacatccc cgtggtgcag aacctgttct cgcacgacga acggcgcgac ttcaccacgt
     4441 cggtgctgat cctgctcacc ccgcgccggg tcgccaattt cggcgacagc ctggaggcca
     4501 gcagccgggt ctacaaactg ttcgccaccg acgacgaacc cgaggcggtg cgcgaggccc
     4561 gccgcacggc gctgaaggaa ttgggcggcg tgtggccgaa cctggtcacc acgttcagcc
     4621 acatggatcg caacaagctg ttcaagggca tccgcaccgg cgacatccgc ctcgaggact
     4681 gggacgagcc gtcacgcctc gagcgcatca tgctgggcgt ggtcgagatg ctctaccgct
     4741 aggccggaca cacagcctgc gccagctcgc agcggttccg gccgttgtgc ttggcgaggt
     4801 aaagggcctc gtcggcgcgc tgcaacagat cttcgatgct ctcgtcgcca tccagggcgc
     4861 cgatgccgat gctgacggtg gcggcgacgg gcagcgtggg gtcggactgg acggcgtcgg
     4921 cgaaggcggt gcgcaggcgc tcggccgccg acagggcctg ggccggcgac gcggcgggca
     4981 tcagggcgac gaattcctcg ccgccgaagc ggcacaccac gtcctcggcg cgcaaagtct
     5041 gttcggcgac ggcgacgaag cggcacagat aggtatcgcc ggcggcatgg ccgtggcggt
     5101 cgttgatctg cttgaaatgg tccagatcca tcaccagcac cgccagcgcc tcgccctggc
     5161 gccggcaacg ggccagggcc ttctgcgcca gcagggcgaa ggcccggcgg ttgagcgctc
     5221 cggtcaacgg atcgcggctg gcctggtggt tcagctcctc ctgcagcctt tcgctggtca
     5281 tcaacgccat ccccagggtc gtcgccagga ccaggctcag catccacagc agggcggccg
     5341 aggtgtagcg gtcggacagc aggaccatct cgggccggtc gctggtcgcg atggccacgg
     5401 cccggcccag gaagaacacc accgtcagca cgtagacccc gccggtcgcc cgctgggcga
     5461 cgcgcccggc ggatgggggc cacagcaact cgcgcgcgat cagcgcggtc accgtcgcca
     5521 cctccagcga cccgatcaag gattgcatcg cctgcgagcc ggccagatgg ccaaaggcca
     5581 gcggcgccat cgccaccgcg acgaccgtgc cggcgcgcca gggcgtcgcc ggcgcgcgcc
     5641 ccaggaagcg gcggaagccg tcccacgaca tcaggaagac ggcgaccatc agaacctgcg
     5701 ccagggggaa cgttcccggc acccggtc
//
LOCUS       DATIKR010000405         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_127061, whole genome shotgun sequence.
ACCESSION   DATIKR010000405 DATIKR010000000
VERSION     DATIKR010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127061"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /gene="rnd"
                     /locus_tag="VLL76_06405"
     CDS             complement(<1..788)
                     /gene="rnd"
                     /locus_tag="VLL76_06405"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HSV29168.1"
                     /translation="MPMIADTASLAEFCQRLASAPYVTVDTEFMREKTYYPQLCLVQI
                     GGPDDAKAIDPLAPGIDLEPLFELLRNPKVLKVFHAARQDVEIFLHMMGSVPAPLFDT
                     QVAAMVCGFGDAVSYENLASQLARARIDKSMRFTDWALRPLTEKQVQYALGDVTHLRV
                     AYEKLVKKLEKNGRIEWLAEEMAELTTPETYRVNPENAWKRLKPRSSSPKFLAVLKEL
                     AAWREREAQERDIPRQRIVRDENLMEIAAHHPTSVEELSRTRGLG"
     gene            complement(847..1854)
                     /locus_tag="VLL76_06410"
     CDS             complement(847..1854)
                     /locus_tag="VLL76_06410"
                     /inference="COORDINATES: protein motif:HMM:NF013335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HSV29169.1"
                     /translation="MSKFVQPILFDTDVGWDDVMSILLMMKNPAVSIAGISVTGCGET
                     HLEDGVAIARGLLALADNKAPVCPGAARPSLYDHVFPASFRAQMDDVMGLRDQLPPPC
                     TPPDPRDAVTMMLDVLESSPVPVVIISIGGMTNIAAMLKRATPKQLANILRISIMGGA
                     VYTGGNVAALNNAKPEWNQGPVYATNVTAEWNMFIDPLAAWHCFNWPTPYLPLELVPL
                     DACNNVILSPEYADMIKATDPVANFLKEVIIKKTGTAKEPDPVPVFDPLATTWGVGLL
                     TKCTVQQIGLDVVYVESLINNASGQTFVSPANPPRPVVTVASEVEFKEVFARLANNPP
                     V"
     gene            2028..>2226
                     /locus_tag="VLL76_06415"
     CDS             2028..>2226
                     /locus_tag="VLL76_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HSV29170.1"
                     /translation="MHAYRTHHCGQLRIEDAGNTARISGWVHRKRDHGNLLFVDLRDH
                     YGITQCVLDISSPVFQTLEKAR"
BASE COUNT          354 a          688 c          770 g          414 t
ORIGIN      
        1 ccgaggccgc gggtgcgcga caattcctcg accgaggtgg ggtggtgggc ggcgatctcc
       61 atcaggttct cgtcgcgcac gatgcgctgg cgcgggatgt cgcgctcttg cgcctcgcgc
      121 tcgcgccacg ccgccagttc cttcagcacc gccaggaact tggggctgga cgagcgcggc
      181 ttcaggcgct tccaggcgtt ctcggggttg acgcgatagg tctcgggcgt ggtcagctcg
      241 gccatttcct cggccagcca ttcgatgcgg ccgttcttct ccagcttctt gaccaacttt
      301 tcataggcga cgcgcagatg ggtgacgtcg cccagggcgt actggacctg cttttcggtc
      361 agcggccgca gcgcccagtc ggtgaagcgc atggacttgt cgatgcgggc gcgggccaac
      421 tggctggcca ggttttcgta cgacacggca tcgccgaatc cgcacaccat ggcggccacc
      481 tgggtgtcga acagcggcgc cggtacgctg cccatcatgt gcaggaagat ctcgacgtcc
      541 tggcgcgcgg cgtggaagac cttgaggacc ttcggattgc gcagcagctc gaacaaaggc
      601 tccaggtcga tgccgggggc cagcgggtcg atggccttgg cgtcgtcggg gccgccgatc
      661 tgcaccaggc agagctgggg gtaatacgtc ttctcccgca tgaactcggt gtcgacggtg
      721 acgtacgggg cggaggcgag gcgctggcag aattcggcca gggacgcggt gtcggcgatc
      781 ataggcatga aaaaacgttt acacccaacc cccgccctgg gcaagggcgg gggaggggta
      841 cggaagtcac accggcggat tgttggccag ccgtgcgaac acttccttga actccacctc
      901 ggaggcgacg gtcaccaccg ggcgcggcgg gttggccggc gacacgaagg tctggccgct
      961 ggcgttgttg atcaacgact cgacatagac cacgtcgagc ccgatctgct ggaccgtgca
     1021 tttggtcagc aggccgacgc cccaggtggt cgccagcgga tcgaacaccg gcaccgggtc
     1081 gggttccttg gcggtcccgg tcttcttgat gatcacctcc ttcaggaagt tggcgaccgg
     1141 gtcggtggcc ttgatcatgt cggcgtattc ggggctcagg atcacattgt tgcaggcgtc
     1201 gagcggcacc agctcgagcg gcagataggg cgtcggccag ttgaagcagt gccacgccgc
     1261 cagcgggtcg atgaacatgt tccattcggc ggtgacgttg gtggcgtaga ccggcccctg
     1321 gttccattcc ggcttggcgt tgttcagcgc cgcgacgttg ccgccggtgt agacggcgcc
     1381 gcccatgatc gagatgcgca ggatgttggc caattgcttg ggcgtcgcgc gcttcagcat
     1441 ggcggcgatg ttggtcatgc cgccgatcga gatgatcacc accggaaccg gcgagctttc
     1501 cagcacgtcc agcatcatgg tcaccgcgtc gcgcggatcg ggcggcgtgc agggcggcgg
     1561 caattggtcg cgcaggccca tgacgtcgtc catctgggcg cggaagctgg cggggaacac
     1621 gtggtcgtag aggctgggcc gggcggcgcc ggggcagacc ggggccttgt tgtcggccag
     1681 cgccaacagg ccgcgcgcga tggcgacgcc gtcctcgaga tgggtctcgc cgcagccggt
     1741 gacgctgatg ccggcgatgg acacggccgg gttcttcatc atcagcagga tcgacatcac
     1801 gtcgtcccag cccacatcgg tgtcgaacag gatgggctgc acgaattttg acatgattgg
     1861 ttccctccgg ggttgttatg ccagggaggg tagaaggcgc cctcggctta ggtcaaatta
     1921 cgagttgtga ccgtgtgcgg tggctgtcgg ccgattggcg cccttgacga atccgccccc
     1981 gtgtgccttt ttcccggttt cgatttcgct cccggagata gggttccatg cacgcctacc
     2041 gtacgcatca ctgcggccag cttcggatcg aagacgccgg caacaccgcg cgcatctccg
     2101 gctgggtcca tcgcaagcgc gaccacggca acctgctgtt cgtcgacctg cgcgaccatt
     2161 acggcatcac ccagtgcgtg ctggacatct ccagcccggt gttccagacg ctggaaaagg
     2221 cgcgcc
//
LOCUS       DATIKR010000406         2342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_224246, whole genome shotgun sequence.
ACCESSION   DATIKR010000406 DATIKR010000000
VERSION     DATIKR010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224246"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..335)
                     /locus_tag="VLL76_06420"
     CDS             complement(69..335)
                     /locus_tag="VLL76_06420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29171.1"
                     /translation="MPLPYETRRRPSMLGLALSVGGALSIVTALALTALVLWLDLSRD
                     EVPYIGMTVRIVVIGGFFAALGFMMWKVGGSLKAAPHRIARDED"
     gene            612..1529
                     /locus_tag="VLL76_06425"
     CDS             612..1529
                     /locus_tag="VLL76_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29172.1"
                     /translation="MKRLMLVLLAALAGWSFEAAAEPLLKPFVLASRGSEDPAAVAAA
                     VTAKLKAANFTVVGSYSPYPAATVIAVTDDRLRAEAAKSRFGGYGAVQRVAVTRVRDE
                     TQVSYTNPLYFAQAYRMASDLAPVAGRLEQALGRLQEFGPKDGLPAEELRSYRYMFGM
                     ERFSDPNLLAEHASYKDAVAAVESGLAAGTKGVSKVYRVDLPGKDETVFGVALKGSGG
                     NEQQDDAFIMNEIDFKELRSTAHLPYEMLVSGNKVYALSARFRIAIDFPDLSMMGSNS
                     FMNIMGSPDAIRTALSHAAGGDWTVLKAQ"
     gene            1596..>2342
                     /locus_tag="VLL76_06430"
     CDS             1596..>2342
                     /locus_tag="VLL76_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29173.1"
                     /translation="MWIGRLWPRRAKAPPSQPPAKAAASPRALSGAGGSGGWHTGYLD
                     PRTFVAAVKQLLEQSRTLNPRLHVFSLADFRQAAGGKWDRIADMVTTVTESIIRRHLN
                     PKTDIFTQIDAETSLLALPLSSRGDARTCVAAIARDLATHLFGDAVIAGRRPQVVAGN
                     MAMEEAVTEDGDLDMGAVRRAVREAAPALAPDEPKWAVLTPPHRAELARLLLPEPPLG
                     GGDVPEWAELHVHHQAAEAEVRPLLPTTTLG"
BASE COUNT          379 a          798 c          804 g          361 t
ORIGIN      
        1 gttcgtttgt ggtgccaaaa gccgcgatgg cgctgtcgcc ctggcgcggg tcgctgctgg
       61 cgactaatct agtcttcgtc tctggcgatg cggtgggggg cggccttcag cgacccaccg
      121 accttccaca tcatgaagcc cagtgcggcg aagaagccgc cgatcacgac gatgcgcacg
      181 gtcatgccga tataggggac ctcgtcgcgc gacaaatcca gccacagcac cagggccgtc
      241 agcgccagcg ccgtcacgat cgacagggcg ccgccgaccg acagcgccag ccccagcatg
      301 ctggggcggc ggcgggtttc atagggcaga ggcatggttt cggaggcggg ggggcgcacg
      361 attttttttc acaacttcaa atgacggcgc gcatcctact tctattagga gaaaaaagcg
      421 actgtcataa tcggtgtgct gccaaaaaat tgtaccggcg caccgacaag gggctttggc
      481 gccggggtgt tcccgggtgc cgaccatgct aaaggtcggg tgcgaccata ctactacccg
      541 ccggattcgg ctgctcctca tcatccgccc aaaggcgcgc aagaccgcct gtgagacagc
      601 ggaggaaccc gatgaagaga ttgatgctgg tgttgctggc ggctctggcc ggctggtcgt
      661 tcgaggccgc cgccgagccg cttctgaagc cgttcgtgct ggcgtcgcgc ggcagcgaag
      721 atccggcggc ggttgccgcg gccgtgaccg ccaagctgaa ggcggccaac ttcacggtgg
      781 tcggcagcta ttcgccctat cccgccgcca ccgtgatcgc ggtcaccgac gaccgcctgc
      841 gcgccgaggc cgccaagagc cggttcggcg gctatggcgc cgtccagcgg gtcgcggtga
      901 cgcgggtgcg cgacgagacc caggtcagct acaccaatcc tctctatttc gcccaagcct
      961 accgcatggc ctcggacctg gcgccggtgg cggggcggct cgagcaggcg ctggggcggc
     1021 tccaggaatt cgggcccaag gacggcttgc cggccgaaga gctgcgctcg taccgctaca
     1081 tgttcggcat ggagcggttc agcgacccca acctgctggc cgagcacgcc agctacaagg
     1141 acgcggtcgc cgccgtggaa agcggcctcg cggccggcac caagggggtg tcgaaggtct
     1201 accgcgtcga tctgcccggc aaggacgaga ccgtgttcgg cgtcgccctg aagggcagtg
     1261 gcggcaacga gcagcaggac gacgcgttca tcatgaacga gatcgacttc aaggaactgc
     1321 gctcgaccgc gcacctgccc tacgagatgc tggtgtcggg caacaaggtc tacgccctgt
     1381 cggcccgttt ccgcatcgcc atcgactttc ccgacctgtc gatgatgggg tcgaacagct
     1441 tcatgaacat catgggcagc cccgacgcca tccgcaccgc cctgtcccat gccgccggcg
     1501 gcgattggac ggtgttgaag gcacagtgat ccggcggcgg ggatggtgct ataatgggcc
     1561 aacgtgctcc cgcccccccg cggtgaggtg gaccgatgtg gatcggcagg ctgtggcccc
     1621 ggcgcgccaa ggcgcccccc tcgcagccgc ccgccaaggc ggcggcctcg ccgcgcgccc
     1681 tttcgggcgc cggcggttcg ggcggctggc ataccggcta cctggatccc cgcactttcg
     1741 tcgccgcggt caagcagctg ctggagcaga gccgcacgct gaacccgcgc ctgcatgtgt
     1801 tctcgctggc cgatttccgt caggcggcgg gcggcaagtg ggaccgcatc gccgacatgg
     1861 tgacgacggt caccgagtcc atcatccgcc gccacctcaa tcccaagacc gacatcttca
     1921 cccagatcga cgccgagacc tcgctgctgg cgctgccctt gtcgtcgcgc ggcgacgcgc
     1981 gcacctgcgt cgccgccatc gcccgcgacc tcgccaccca tctgttcggc gatgcggtga
     2041 tcgccggccg gcggccgcag gtggtggccg gcaatatggc gatggaagag gcggtgaccg
     2101 aggatggcga cctcgacatg ggagcggtgc ggcgggcggt gcgcgaggcg gcaccggcgc
     2161 tggcgccgga cgagcccaaa tgggcggtgc tgacgccacc ccaccgcgcc gagctggccc
     2221 gcctgctgct gcccgagccg cccctgggcg gtggggacgt gccggaatgg gccgagttgc
     2281 atgtccacca ccaggccgcc gaggccgagg tgcggccgct gctgcccacc accacgctgg
     2341 gg
//
LOCUS       DATIKR010000407         2237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_151525, whole genome shotgun sequence.
ACCESSION   DATIKR010000407 DATIKR010000000
VERSION     DATIKR010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151525"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="VLL76_06435"
     CDS             <1..729
                     /locus_tag="VLL76_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSV29174.1"
                     /translation="PTVHYNMGGIPTNVYGEVLRPTQDNPDATVEGLMAIGEAACVSV
                     HGANRLGTNSLLDIVVFGRAAALRCQETLKPGTPHKPLPQGAGDNAVARFDRLRNANG
                     SMHTSEIRLAMQKTMQMDAAVFRTSKSLAEGVEKMGQVASTLPQIKINDRSTIWNSDL
                     VEALELENLMDCALATIVSAEARKESRGAHAHEDFPDRDDVNWQKHTLAWVKDGKVSL
                     DYRPVHTYTLTDEVEYIKPQKRVY"
     gene            752..1531
                     /locus_tag="VLL76_06440"
     CDS             752..1531
                     /locus_tag="VLL76_06440"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HSV29175.1"
                     /translation="MVEFALPANSRVQPGKVHKAAGAKNVKVFKIYRYDPDSGSNPRL
                     DSYEVDMDACGPMVLDALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACLKP
                     IEDIKGEARIYPLPHMPVVKDLVPDLTVPYAQLASIKPWMQTQSPTPPDGERLQSPEE
                     REKLDGLWECILCFCCQTSCPSYWWNGDRYLGPAVLLQAARWIHDSRDEMTGERLDAL
                     EDPFKLYRCHTIMNCTKTCPKGLNPAKAIGSIKEKIIERRA"
     gene            1709..>2237
                     /locus_tag="VLL76_06445"
     CDS             1709..>2237
                     /locus_tag="VLL76_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018009101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV29176.1"
                     /translation="MNVKLLAAAGAVSAALAAPAFAADAVSDGVVRIGVLNDQSGIYV
                     DMAGPGSVIAAKMAVEDFGGKVLGKPVEIVAGDHQNKPDVGAALVNRWIDQDKVDTIV
                     DIPTSSVLLAVQEIGRAKNRLVIASTGGSSDFTGKFCSPVGIHWTYDTYGLAVGTGAP
                     LAKDGPWYFVTADYAF"
BASE COUNT          427 a          770 c          688 g          352 t
ORIGIN      
        1 ccgaccgtgc actacaacat gggcggcatc cccaccaacg tgtacggcga ggtgctgcgt
       61 ccgacccagg acaacccgga cgccaccgtc gagggcctga tggccatcgg cgaggccgcc
      121 tgcgtgtcgg tccacggcgc caaccgcctg ggcaccaact cgctgctcga catcgtggtg
      181 ttcggccgcg ccgccgcgct gcgctgccag gagaccctga agcccggcac cccgcacaag
      241 ccgctgcccc agggcgccgg cgacaacgcg gtggcccgct tcgaccgcct gcgcaacgcc
      301 aacggctcga tgcacaccag cgaaatccgt ctcgccatgc agaagaccat gcagatggac
      361 gccgccgtgt tccgcacctc gaagtcgctg gccgagggcg tcgagaagat gggtcaggtc
      421 gcctcgaccc tgccgcagat caagatcaac gaccgttcca ccatctggaa ctcggatctg
      481 gtcgaggcgc tggaactcga gaacctgatg gattgcgcgc tcgccaccat cgtgtcggcc
      541 gaggcccgca aggaatcgcg cggcgcccac gcccacgagg acttccccga tcgcgacgac
      601 gtcaactggc agaagcacac cctggcctgg gtcaaggatg gcaaggtgtc gctggactac
      661 cgcccggtgc acacctacac cctgaccgac gaggtcgagt acatcaagcc gcagaagcgc
      721 gtgtactaag gccagggaag gagaaacaga catggtcgaa ttcgccctgc ccgccaactc
      781 ccgcgttcag cccggcaagg tccacaaggc cgccggcgca aagaacgtca aggtgttcaa
      841 gatctaccgc tacgatccgg attcgggctc caacccgcgc ctggattcct acgaggtgga
      901 catggacgcc tgcggtccga tggtcctgga cgccctgttg aagatcaaga acgagatcga
      961 ctcgaccttg accttccgcc gctcgtgccg tgaaggcatc tgcggctcgt gcgccatgaa
     1021 catcgacggc accaacaccc tggcctgcct gaagcccatc gaggacatca agggcgaggc
     1081 ccgcatctat ccgctgccgc acatgccggt ggtcaaggat ctggtgccgg acctcaccgt
     1141 cccctatgcc cagttggcct cgatcaagcc gtggatgcag acccagtcgc cgaccccgcc
     1201 ggacggcgag cgcctgcagt cgccggaaga gcgagagaag ctcgacggcc tgtgggagtg
     1261 catcctgtgc ttctgctgcc agaccagctg ccccagctat tggtggaacg gcgaccgcta
     1321 tctcggcccg gccgtgctgc tgcaggcggc ccgctggatc cacgactcgc gcgacgaaat
     1381 gaccggcgag cgtctcgacg ccctggaaga tccgttcaag ctgtaccgct gccacaccat
     1441 catgaactgc accaagacct gccccaaggg cctgaacccg gccaaggcga tcggcagcat
     1501 caaggaaaag atcatcgagc gccgcgccta aggcgacggt cgagatcgaa acggaaaggc
     1561 ccgtcgggaa accggcgggc ctttttgctg gccgccagtg tatttatttc cgcatacaac
     1621 acatgttttt tgttatagcg gaatgcattt gacgctgcag agtgtaaaac cgcaccatcc
     1681 gctccgtcag tttcctggag tggatgagat gaacgtcaag ctgcttgccg ccgccggtgc
     1741 cgtttccgcc gccctggccg cccccgcctt cgccgccgac gcggtgtcgg acggcgtggt
     1801 caggatcggc gtgctcaacg accagtcggg catctatgtg gacatggccg gccccggttc
     1861 ggtgatcgcc gccaagatgg cggtcgagga tttcggcggc aaggtgctgg gcaagccggt
     1921 cgagatcgtc gccggcgacc accagaacaa gcccgacgtc ggcgccgccc tggtcaaccg
     1981 ctggatcgac caggacaagg tcgacaccat cgtcgatatc ccgacctcgt cggtgctgct
     2041 ggcggtccaa gagatcgggc gcgccaagaa ccgccttgtg atcgcctcga ccggcggctc
     2101 gtcggacttc accggcaagt tctgctcgcc ggtgggcatc cactggacct acgacaccta
     2161 tggcttggca gtgggcaccg gcgcgccgct ggccaaggac ggcccgtggt atttcgtcac
     2221 cgccgactac gccttcg
//
LOCUS       DATIKR010000408         3723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66914, whole genome shotgun sequence.
ACCESSION   DATIKR010000408 DATIKR010000000
VERSION     DATIKR010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66914"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1889
                     /locus_tag="VLL76_06450"
     CDS             <1..1889
                     /locus_tag="VLL76_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV29177.1"
                     /translation="SLMSLDMGSLIAGAKFRGEFEERLKAVLSEITAAGGDIILFIDE
                     MHTLVGAGAAEGAMDASNLLKPALARGELHCVGATTLNEYRKHVEKDAALARRFQPVF
                     VSEPTVEDTISILRGIKEKYELHHGVRISDGALVSAATLSNRYITDRFLPDKAIDLVD
                     EAASRLRMEVDSKPEELDELDRRIIQLKIEREALKKEPDAASRDRLDKLEDELAELEA
                     DSARVTAAWRAEKDQLASATKIKEQLDQSRIELDMAKRKADWARAGELEYGVIPELER
                     KLAQADDAKHGMLNEAVTDEHIAGVVSRWTGIPVEKMLAGEREKLLGMESRLKSRVVG
                     QDEALVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMI
                     RMDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFN
                     VLLQVLDDGRLTDGQGRTVDFRNTLIVLTSNLGADILANQAEGHDSSEVRAEVMEVVR
                     ASFRPEFLNRLDEILLFHRLSRGNMTGIVEIQLGRLLKLLADRKIGLELDDEARKWLA
                     DKGYDPVYGARPLKRVIQRFLQNPLASLILEGRVRDGETVRVSAADGHLTINGDKVAM
                     DAAA"
     gene            complement(2249..3571)
                     /locus_tag="VLL76_06455"
     CDS             complement(2249..3571)
                     /locus_tag="VLL76_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSV29178.1"
                     /translation="MVGLVGVVALFAARPFVQFGDGDEPIDGNPPSYIDFEAERVARA
                     LPSASDSELEDRAGRPVERQVQVGSGDTLMDVLVRAGVDVGEANQAIDALKDVFNPRG
                     LRAGQKVMVSFDKPPHGFGIGDFHKVSLNADPVREVAAKRTDSGTFAGIEARRAVSVQ
                     VAHYAGTIKSSLYESAQNAGVPAPVIISMIKALSYDVDFQRDIQSGDGFQVMFEGFYD
                     TKGKLVRHGDMLFASITLDGKPIAMYRHETDGGTVEYFNDKGESIKKALLKTPVDGAK
                     ISSGFGMRSHPILGYTKMHKGIDFAVPTGTPIQAAGDGTVEMAGFNGAYGNYVRVRHG
                     SGYATAYAHMSRIAVGMKPGKRVSQGQIVGFVGSTGRSTGPHLHYEVMVGNAQVNPLS
                     IKMPTNTKLAGRDLERFKATKRETDTLLAKIPPSTRLALNQGKASLTN"
BASE COUNT          638 a         1178 c         1273 g          634 t
ORIGIN      
        1 agagcctgat gagcctcgac atgggttcgc tgatcgcggg cgccaagttc cgcggcgagt
       61 tcgaggagcg cctgaaggcg gtgctgagcg agatcacggc ggccggcggc gacatcatcc
      121 tgttcatcga cgaaatgcac accctggtcg gcgccggcgc cgccgagggc gccatggatg
      181 cctcgaacct gctgaagccg gcactggcgc gcggcgagct gcattgcgtc ggcgccacca
      241 cgctcaacga ataccgcaag catgtcgaga aggacgccgc cctggcacgg cgtttccagc
      301 cggtcttcgt gtcggaaccg accgtcgagg acaccatctc gattctgcgc ggcatcaagg
      361 agaagtacga gctgcatcac ggcgtgcgca tctcggacgg cgccctggtg tcggcggcga
      421 ccttgtccaa ccgctacatc accgatcgct tcctgcccga caaggccatc gacctggtgg
      481 acgaggcggc cagccgcctg cgcatggagg tggattccaa gcccgaggaa ttggacgagc
      541 tcgaccgccg catcatccag ttgaagatcg agcgcgaggc cctgaagaag gaacccgacg
      601 cggcctcgcg cgaccggctg gacaagctcg aggacgaact ggccgagttg gaggccgaca
      661 gcgcccgcgt caccgccgcc tggcgggcgg aaaaggacca gttggcctcg gccaccaaga
      721 tcaaggaaca actggaccag tcccgcatcg aactggacat ggccaagcgc aaggccgact
      781 gggcgcgggc cggcgaactg gaatacggcg tcatccccga gcttgagaga aagctcgccc
      841 aggccgacga cgccaagcac ggcatgctca acgaggcggt gaccgacgag catatcgccg
      901 gcgtggtgtc gcgctggacc ggcatcccgg tggaaaagat gctggccggc gagcgcgaga
      961 agcttctggg catggaaagc cgcctgaagt cgcgggtggt gggccaggac gaggctctgg
     1021 tggcggtgtc caacgcggta cgccgcgccc gcgccggcct gcaggacccc aaccggccga
     1081 tcggatcgtt cctgttcctc ggccccaccg gcgtcggcaa gaccgagctg accaaggcgc
     1141 tggccgagtt cctgttcgac gacgagaccg ccatgatccg catggacatg tcggaataca
     1201 tggaaaagca ttccgtcgcc cgtctgatcg gcgcgcctcc gggctatgtc ggctacgagg
     1261 agggtggggc gctgaccgag gcggtgcggc ggcggcccta ccaagtcgtg ctgttcgacg
     1321 aggtcgagaa ggcgcatccc gacgtcttca acgtgctgct gcaggtgctc gacgacggcc
     1381 gcctgaccga tggccagggg cgcaccgtcg atttccgcaa cacgctgatc gtgctgacct
     1441 cgaacctggg cgccgacatc ctcgccaacc aggccgaggg ccacgattcg tccgaggtgc
     1501 gggccgaggt gatggaggtg gtgcgcgcca gcttccgccc cgaattcctc aaccgtctcg
     1561 acgagatcct gctgttccac cgcctcagcc gcggcaacat gaccgggatc gtcgagatcc
     1621 aattgggccg cctgctcaag ctgttggccg accgcaagat cgggctggag ctggacgacg
     1681 aggcccgcaa gtggctggcc gacaagggct atgacccggt ctacggcgcc cggccgctca
     1741 agcgggtgat ccagcgcttc ctgcagaacc ctctcgccag cctgatcctg gaagggcggg
     1801 tgagggacgg cgagaccgtg cgggtgtcgg ccgccgacgg gcacctcacc atcaacggcg
     1861 acaaggtggc catggacgcc gccgcctgat gtccggtttc ccggctggcc gcgctgatca
     1921 ccttagggtt ttccgcaagg tgcgcgccgg ccgggaaatg ggttataccg ttgcttgagg
     1981 gccgcatatc agatatatct aatttgcacg acgaattgtg tgttctcgct ttccttcacg
     2041 cttcatgtcg tgctagaagg cggcccgtgg cgggaaagtc ccgcttgcaa agaattcgaa
     2101 atcggccggt gctccgttcc ccctcccccc ccacaggggt gctggccgcc aggcccgggg
     2161 ttcccacttg ctgggaaccc cggccgacct gaaaagcaaa aggcccatcc gcgacggatg
     2221 ggcctttttt cgttgcccgg cgtcgctttt agttcgtcag cgaggccttg ccctggttca
     2281 gggccagtcg ggtcgacggc gggatcttgg ccaacagggt gtcggtctcg cgcttggtcg
     2341 ccttgaagcg ctccaggtcg cggccggcca gcttggtgtt ggtcggcatc ttgatggaca
     2401 gcgggttcac ctgggcgttg cccaccatca cttcataatg caggtgcggg ccggtggagc
     2461 ggccggtcga gccgacgaag ccgacgatct ggccctgcga cacacgcttg ccgggcttca
     2521 tgccgacggc gatgcggctc atgtgggcat aggcggtggc atagccgctg ccatggcgga
     2581 cgcgcacgta attgccatag gcgccgttga agccggccat ctcgacggtg ccgtcgccgg
     2641 cggcctggat gggggtgccg gtggggacgg cgaagtcgat gcccttgtgc atcttggtgt
     2701 agcccaggat cggatggctg cgcatgccga agcccgagct gatcttggcg ccgtcgaccg
     2761 gggtcttcag cagcgccttc ttgatgctct cgcccttgtc gttgaaatac tcgacggtgc
     2821 cgccgtcggt ttcgtggcgg tacatggcga tgggcttgcc gtccagggtg atgctggcga
     2881 acagcatgtc gccgtggcgc accagcttgc ccttggtgtc gtagaagccc tcgaacatca
     2941 cctggaagcc gtcgcccgac tggatgtcgc gctggaagtc gacgtcatag gacagcgcct
     3001 tgatcatcga gatgatgacg ggcgccggca cgccggcgtt ctgggcgctt tcgtacaggc
     3061 tggacttgat ggtgccggcg tagtgggcga cctggaccga gacggcgcgg cgggcctcga
     3121 tgccggcgaa ggtgccggaa tcggtgcgct tggcggcgac ctcgcgcacc gggtcggcgt
     3181 tcaggctgac cttgtggaag tcgccgatgc cgaagccgtg aggcggcttg tcgaagctga
     3241 ccatcacctt ctggccggcc ctgaggccgc gcggattgaa cacgtccttc aacgcgtcga
     3301 tggcctggtt ggcttcgccg acatcgaccc cggcgcgcac cagcacgtcc atcagggtgt
     3361 cacccgaacc cacctgtacc tggcgctcga cgggacggcc ggcgcggtct tcgagttcgc
     3421 tgtcggaagc actgggcaag gcgcgggcga cgcgctcggc ctcgaagtca atataagagg
     3481 ggggattgcc gtcgatgggc tcgtcgccgt caccgaattg aacgaacggg cgcgccgcga
     3541 acagtgccac gacaccgacc aggccgacca cggaggcggc cctgatggtc cttttgatct
     3601 tcgcggaaac gcagcagccc aaggcgttcc ttccggccat agtcattttg tccatggggt
     3661 tatcgcagtc ggagagacga aaggcaagga tttatgcgga aaattcggcc ttgactgtgg
     3721 cgg
//
LOCUS       DATIKR010000409         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79146, whole genome shotgun sequence.
ACCESSION   DATIKR010000409 DATIKR010000000
VERSION     DATIKR010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79146"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1488
                     /locus_tag="VLL76_06460"
     CDS             <1..1488
                     /locus_tag="VLL76_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29179.1"
                     /translation="RPAERAMGGSYELETELRALAGARQHIGSLSELLRKAHVNDLPV
                     QLEATAQTQAARLLADVDLMAQGLFLPSDPTFSWWDGAMPVAARSYGVANNAELAVVL
                     EADRESLLRLTREYAEPLVKMLEALPGQETRTGRDLVVKWQAIMRVLARHEQKDRDTT
                     LKRLEQFVLADMDKVDLNTCAGLSVPPDAAGGGDLFLRQLEVIRSGLGERCRWLARQR
                     AVDAYARLHRLFNQTLAGRFPFAVDPAPATPRAEAGDVRQFFFALGRDGMPDRTALER
                     AAGPEAATFVARLAEVRQALAPMLVDPVLEQPLAYEVKADFRTNADRDLGGNQVIEWV
                     LDLGGDQRLSSLDAKRIATWTAGQPVRLSVRFARNAPTIPAADPRGRYRVDGPVATWE
                     YKDPWALLSLLAEHAPAPNRVNELPDRKPHVLRLAVALGRNPDAASGAAMDAPTAELF
                     LRLGLTSLTRIPGKPEQKDSVTLPTFPPSAPAVDPIVDAFPRARE"
     gene            1549..>1729
                     /locus_tag="VLL76_06465"
     CDS             1549..>1729
                     /locus_tag="VLL76_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29180.1"
                     /translation="MAELVNGHVTISIGLNGNGARRAGGSTARLSENERLSRAQRLRR
                     DGYSYRRIAAVMGLSY"
BASE COUNT          251 a          647 c          583 g          248 t
ORIGIN      
        1 cgcccggccg agcgcgccat gggcggcagc tacgagctgg agaccgaatt gcgcgccctg
       61 gccggcgccc gccagcacat cggcagcttg agcgaattgc tgcgcaaggc ccatgtcaac
      121 gacctgccgg tgcaattgga agccaccgcc cagacccagg ccgcccgcct gctggccgac
      181 gtggatttga tggcgcaggg gctgttcctg ccgtccgacc cgaccttctc gtggtgggac
      241 ggcgccatgc cggtggcggc acggtcctat ggcgtcgcca acaacgccga gctggcggtg
      301 gtgctggaag ccgaccgcga atccctgctg cgcctgaccc gcgaatacgc cgagccgctg
      361 gtcaagatgc tggaagccct gccgggacag gaaacccgca ccggccgcga cctggtggtc
      421 aagtggcagg cgatcatgcg ggtgctggcc cgccatgagc agaaggaccg cgacaccacc
      481 ctgaagcggc tcgagcaatt cgtgctcgcc gacatggaca aggtggacct caacacctgc
      541 gccggcctgt cggtaccgcc cgatgccgcc ggcggcggcg acctgttcct gcgccagttg
      601 gaggtcatcc gcagcggcct gggcgagcgt tgccgctggc tggcccgcca gcgcgccgtc
      661 gatgcctatg cccgcctgca ccgcctgttc aaccagaccc tggccggccg cttcccgttc
      721 gccgtcgatc ccgccccggc gacgccgcgc gccgaggccg gcgacgtgcg ccagttcttc
      781 ttcgccctgg gccgcgacgg catgcccgac cgcaccgccc tggagcgcgc cgccggcccc
      841 gaggccgcca ccttcgtcgc ccgcctggcc gaggtgcgcc aggcgctggc gcccatgctg
      901 gtggacccgg tgctggagca gccgctggcc tatgaggtca aggccgactt ccgcaccaat
      961 gccgaccgcg acctgggcgg caaccaggtg atcgagtggg tgctggacct gggcggcgac
     1021 cagcggctgt cgtcgctgga cgccaagcgc attgccacct ggaccgccgg gcagccggtg
     1081 cgcctgtcgg tccgcttcgc ccgcaacgcc cccaccatcc ccgccgccga ccccaggggc
     1141 cgctatcgcg tcgacgggcc ggtggcgacc tgggaataca aggacccgtg ggcgctgctg
     1201 tcgctgctgg ccgaacacgc gccggcgccg aaccgggtca acgaattgcc cgaccgcaag
     1261 ccgcacgtgc tgcgcctggc ggtggccttg ggccgcaatc ccgacgccgc ctcgggcgcc
     1321 gccatggacg ccccgaccgc cgagttgttc ctgcgcctgg gcttgacgtc gctgactcgc
     1381 atcccgggga aaccggaaca gaaggacagc gtcacgttgc ccaccttccc gccctcggcc
     1441 cccgcggtcg atccgatcgt cgatgctttt ccccgggcaa gggaatgatt gagttgtacg
     1501 cccactcatc ggtgttaaga tggtcgccca cgcgttatgg ggatacgcat ggcggagctg
     1561 gtcaacggcc acgtcaccat cagcatcggt ctcaatggca acggcgcccg ccgggccggc
     1621 ggctcgaccg cgcgcctgag cgagaacgag cggctgtcgc gtgcccagcg cctgcgccgc
     1681 gacggctaca gctatcgccg catcgccgcc gtcatgggcc tgagctatt
//
LOCUS       DATIKR010000410         1891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_127105, whole genome shotgun sequence.
ACCESSION   DATIKR010000410 DATIKR010000000
VERSION     DATIKR010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127105"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1269)
                     /locus_tag="VLL76_06470"
     CDS             complement(<1..1269)
                     /locus_tag="VLL76_06470"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HSV29181.1"
                     /translation="MARRFLLPTAAIAASYWGVSYAIGKFFAAFGMFPAPSWPAAAIA
                     LAAGLLIGLRAAPGIAVGSMLASIAVGGTPTIALGIAVMNTAGPLAAAALIRRYSKIP
                     RPPIHTVHDVFVFVVFGVIVHAAMTASGGIVTLLAHGRVPAGAADWMWFKWWIAHATG
                     SMLFAPAILGCLHDHHHALSRRDRSEAVLVAGVAVVVAAIIFLRDMPEGNHFMGYPFL
                     LIAPLTWVAARFRPREVAVTIALIAVVAAAGTVMERGPFQLAHNANPLVTLAVMLLSY
                     ALASLLLAALAQERRRADDAQRRLLQILEAARDIVSSADAGGRLTYMNEAGRRALGIG
                     LDDDIGRLAIADVHPPQAGDLVMKTALPAVQKEGFWGGENEFLTRDGRRIPVWQVIVA
                     HKNAEGAVEYYSTIARDISARREAEADLRLA"
     gene            complement(1408..>1891)
                     /locus_tag="VLL76_06475"
     CDS             complement(1408..>1891)
                     /locus_tag="VLL76_06475"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933537.1"
                     /note="catalyzes the formation of malate from glyoxylate
                     and acetyl-CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HSV29182.1"
                     /translation="ELRGRPRASLDDILTIPLADRPNWSEDEIRQELGNNAQGILGYV
                     VRWIDQGVGCSKVPDINNIGLMEDRATLRISSQHIANWLHHGIVGREQVMDTMKRMAK
                     VVDGQNAGDPAYRPMAPDFESSIAFQAACDLVFKGRVQPSGYTEPVLHARRIERKAKS
                     "
BASE COUNT          330 a          623 c          647 g          291 t
ORIGIN      
        1 cgccaggcgc aaatccgctt ccgcctcgcg ccgggccgag atatcgcggg cgatggtcga
       61 ataatactcc accgcaccct cggcgttctt gtgggcgacg atgacctgcc ataccgggat
      121 gcggcggccg tcgcgggtca ggaactcgtt ctcgcctccc cagaacccct ctttctggac
      181 ggcgggcagg gcggtcttca tcaccaggtc gccggcctgc ggcggatgga cgtcggcgat
      241 ggccaggcgg ccgatgtcgt cgtccaagcc gatcccgagc gcgcggcggc cggcctcgtt
      301 catataggtc aggcggccgc cggcatcggc cgacgacacg atgtcgcgcg cggcctccag
      361 gatttgcagc aagcgcctct gggcatcgtc ggcgcggcgg cgctcctgcg ccaaggccgc
      421 cagcagaagc gatgccaggg cataggacag cagcatcacc gccagggtca ccagcgggtt
      481 ggcgttgtga gccaactgga acggccctcg ctccatcacc gttccggcgg ctgccaccac
      541 cgcgatcagc gcgatggtga cggcgacctc gcgcgggcgg aaacgcgcgg ccacccaggt
      601 cagcggagcg atcagcagga acgggtagcc catgaagtgg ttcccctcgg gcatgtcccg
      661 aaggaagatg atggcggcca ccaccaccgc gacgccggca accaacaccg cctcgctgcg
      721 atcgcgccgc gacagggcat gatggtggtc gtgcaagcat cccaggatcg cgggggcgaa
      781 cagcatgctt ccggtggcgt gggcgatcca ccacttgaac cacatccaat cggcggcgcc
      841 ggccggaacc cgcccgtggg ccagcaacgt cacgatgccg cccgatgcgg tcatggcggc
      901 atggacgatg acgccgaaga ccacgaagac gaagacgtcg tgcacggtat ggatgggtgg
      961 ccgtgggatc ttggaatatc gccggatcaa tgcggcggca gccagcggac cggcggtatt
     1021 catcaccgcg atgcccaacg cgatggttgg cgttccgccc accgcgatcg aggccagcat
     1081 cgacccgacc gcgatgccgg gagccgccct caaaccgata agcagcccgg cggcaagggc
     1141 gatggcggcg gcgggccatg acggcgccgg gaacatgcca aaggcggcga agaacttgcc
     1201 gatggcgtag gacacgcccc aataagaggc ggcaatggcg gcggtgggca atagaaaacg
     1261 gcgagccatt cgaacgtcca tctcgtaccg gagaccccaa atctccggcc cagcggacag
     1321 cccgccagca gccctatcaa accgctttgc gcggttttcc gatagggtta gacactatgc
     1381 ccttggtata gtgccgtcaa ttgccggtta cgacttggcc tttcgttcga tgcgtcgcgc
     1441 gtgcagcacc ggctcggtgt agccgctggg ttgtacgcgc cccttgaaca ccaggtcgca
     1501 ggcggcctgg aacgcgatgc tggactcgaa gtcgggggcc atggggcgat aggcggggtc
     1561 gccggcattc tggccgtcca ccaccttggc catgcgcttc atggtgtcca tcacctgctc
     1621 gcgcccgacg atgccgtggt gcagccagtt ggcgatatgc tggctggaga tgcggagcgt
     1681 ggcgcggtcc tccatcaggc cgatgttgtt gatgtcgggc accttggagc agccgacgcc
     1741 ctggtcgatc cagcgcacca catagccgag gatgccctgg gcgttgttgc ccagctcctg
     1801 ccggatctcg tcctcggacc agttggggcg gtcggccagc gggatggtga ggatgtcgtc
     1861 gaggctggca cgcggccggc cgcgcaattc c
//
LOCUS       DATIKR010000411         2312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_127112, whole genome shotgun sequence.
ACCESSION   DATIKR010000411 DATIKR010000000
VERSION     DATIKR010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127112"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..862)
                     /locus_tag="VLL76_06480"
     CDS             complement(<1..862)
                     /locus_tag="VLL76_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV29183.1"
                     /translation="MKIATRLWLIVATALVGTIAVVVISLLESRADLLADREIKTRHI
                     VEVGSSLVAHYQAQEKAGTLSREDAQAAALAALSALRYEQTEYLWVHRKADTVMLAHP
                     NAKLIGTSVADMQDKSGLFLFHEMNRTVAEKGAGMVMYNWPRPGEADAVPKLSYVQGF
                     APWDWVIGSGIYIDDVNAAFAKRALLFGLGAVVILALVGAIATLIGRTISRPLTSVTA
                     VLDRLTQDDHDVEIRHTDRADEIGALARGLLVFRSHVEEANAAAERKLREQEAQLARQ
                     REIERLAASFD"
     gene            complement(993..>2312)
                     /gene="pap"
                     /locus_tag="VLL76_06485"
     CDS             complement(993..>2312)
                     /gene="pap"
                     /locus_tag="VLL76_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0043751 - polyphosphate:AMP
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate:AMP phosphotransferase"
                     /protein_id="HSV29184.1"
                     /translation="TRAYGAPSDEERERPDYWRYWRDLPPKGKVGLFLSSWYHPPLVD
                     RAYGRISVAEMDEQLERIVHFEKALADEGALILKFWMHLSEKAQKKRLKKLEEDPMTA
                     WEVTEQDWRHWEMYDKFAGAAEQLIRHTSKGNAPWQIVEGADARYRYAVVLTAIRDAV
                     TRHLAQREVARKVAAEIKKAAVPKPKNKGPASPLAGQPSILSSLDMTQSLDGDEYNKQ
                     LQEQRARVAELYRKAKDKGLSTVLVFEGWDAAGKGGAIRRMTNAMNARDYQVIPIAAP
                     TEEERAQHYLWRFWRHLSRAGRFTIFDRSWYGRVLVERVEGFCTEEAWRRAYGEINDF
                     EEQLTNHGIVMCKFWLHITSEEQLQRFKLRETIDYKKWKLTDEDWRNREKWDLYESAV
                     NDMVERTSTRNAPWTLVEANSKNFARVKVMRTVCDALEAALSKKKKK"
BASE COUNT          335 a          752 c          780 g          445 t
ORIGIN      
        1 tgtcgaagct ggcggccagc cgctcgatct cgcgctggcg ggccaattgg gcctcctgct
       61 cgcgcagctt gcgctcggcg gcggcgttgg cttcctccac atgggaacgg aacaccagca
      121 ggccgcgcgc caaggcgccg atctcgtcgg cgcggtcggt gtgccggatc tcgacgtcgt
      181 ggtcgtcctg ggtcaggcgg tccagcacgg cggtcaccga ggtcagcggc cgcgagatgg
      241 tgcggccgat cagggtggcg atggcgccga ccagggccag gatcaccacc gcgccaagcc
      301 cgaacagcag ggcgcgcttg gcgaaggcgg cgttgacgtc gtcgatgtag atgcccgagc
      361 cgatgaccca atcccacggc gcgaagccct gcacgtagct gagcttgggc acggcgtcgg
      421 cctcgccggg gcgcggccag ttgtacatca ccatgccggc gcccttttcg gcgaccgtgc
      481 ggttcatctc atggaacagg aacaggccgc tcttgtcctg catgtcggcg acgctggtgc
      541 cgatcagctt ggcgttgggg tgggccagca tcaccgtgtc ggccttgcgg tggacccaca
      601 ggtattcggt ctgctcgtag cgcagcgccg acagcgcggc cagcgcggcc gcctgggcgt
      661 cttcgcggct gagcgtgccg gctttttcct gggcctggta atgggccacc agcgacgatc
      721 cgacctcgac gatgtggcgg gtcttgatct cgcggtcggc cagcaggtcg gcgcgcgatt
      781 ccagcaggct gatgacgacc acggcgatgg tgccgaccaa agcggtggcg acgatcagcc
      841 acaggcgagt ggcaatcttc atgatgttcc cccctcggat gcccggatct atgcctgggt
      901 caatctccgc gtggggttat atcgcgatcg ccgcatccat gcaacgaacg tatagctgtg
      961 cgtaatcgtt agtatagtca acctgagcgg gtttacttct tcttcttctt cgacagggcg
     1021 gcttccaacg cgtcgcacac cgtccgcatc accttgaccc gtgcgaagtt cttggaattg
     1081 gcttcgacca gggtccacgg cgcgttgcgg gtggaggtcc gctcgaccat gtcgttgacg
     1141 gcggattcgt acaggtccca tttctcgcgg ttgcgccagt cctcgtcggt cagcttccac
     1201 ttcttgtagt cgatggtctc gcgcagcttg aagcgctgca actgctcctc cgacgtgatg
     1261 tggagccaga acttgcacat cacgatgccg tggttggtga gctgctcctc aaaatcgttg
     1321 atctcgccat aggcgcgccg ccaggcttcc tcggtgcaga agccctcgac gcgctcgacc
     1381 agcacgcggc cgtaccacga tcggtcgaag atggtgaagc ggccggcgcg cgacaggtgg
     1441 cgccagaacc gccacaggta atgctgggcg cgctcttcct cggtgggggc ggcgatgggg
     1501 atgacctggt agtcgcgggc gttcatggcg ttggtcatgc gccggatggc gccgcccttg
     1561 ccggcggcgt cccagccctc gaacaccagc acggtggaca ggcccttgtc cttggccttg
     1621 cggtacaatt cggcgacgcg ggcccgctgc tcctggagct gcttgttgta ctcgtcgccg
     1681 tccaggcttt gcgtcatgtc cagcgaggac aggatcgacg gctggccggc gagcgggctg
     1741 gccgggccct tgttcttggg cttgggcacg gcggccttct tgatctcggc cgccaccttg
     1801 cgggcgacct cgcgctgcgc caggtggcgg gtgacggcgt cgcggatggc ggtcagcacc
     1861 acggcatagc gatagcgggc gtcggcgccc tcgacgatct gccacggcgc gttgcccttg
     1921 ctggtgtggc ggatcagttg ctcggcggcg ccggcaaact tgtcgtacat ctcccaatgg
     1981 cgccagtcct gctcggtgac ctcccacgcg gtcatcgggt cttcttccag cttcttcagc
     2041 cgcttcttct gggccttctc ggacaggtgc atccagaatt tcaggatcag cgcgccctcg
     2101 tcggccaggg ccttctcgaa atggacgatg cgctcgagct gctcgtccat ctcggccacc
     2161 gaaatgcggc cataggcgcg gtccaccagc ggcgggtggt accacgacga caggaacagc
     2221 ccgaccttgc ccttgggcgg caggtcgcgc caatagcgcc agtaatcggg gcgctcgcgc
     2281 tcttcgtcgg acggcgcgcc ataggcccgc gt
//
LOCUS       DATIKR010000412         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_6129, whole genome shotgun sequence.
ACCESSION   DATIKR010000412 DATIKR010000000
VERSION     DATIKR010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6129"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..756
                     /locus_tag="VLL76_06490"
     CDS             22..756
                     /locus_tag="VLL76_06490"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HSV29185.1"
                     /translation="MANPIEQFKIKPIIPLEIGGVDVSFTNSAVMMVISVVLITAFLT
                     VSVRSRALVPGRWQSMAEVFYEFVANMLRDNVGSEGRKYFPFIFTLFMFVLFGNLLGM
                     VPGAFTYTSHVIVTFGMAAVVFLGVTVIGFARHGLHFLRMFFPEGAPLATAVILVPIE
                     IISYFSRPFSLAVRLFANMTVGHIILKVLGGFVVALGGFYVVPGIVPFAFLGGITVLE
                     FGIALLQAYVFTILSCIYLHDAIHMH"
     gene            813..1037
                     /locus_tag="VLL76_06495"
     CDS             813..1037
                     /locus_tag="VLL76_06495"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009870554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HSV29186.1"
                     /translation="MDPQAAKFIGAGLAAIGMIGSGIGVGNIWSNLIATVGRNPAAKA
                     NVELYGWIGFAVTEAIALFALVVALMVLFA"
     gene            1150..1644
                     /locus_tag="VLL76_06500"
     CDS             1150..1644
                     /locus_tag="VLL76_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HSV29187.1"
                     /translation="MPQFDPAFFAPQLFWLAITFITLYFLMAKVALPKIGAVLDERQR
                     KIDDNLDKAAQLKAEAEAAVAAYEKALAESRSHAHAVIKETAERLAKHAEERNKELNA
                     KLADQIKAGEARISAAKDTALANVRTVAVEVAGAAIARLTGGSTDQTVVESAVAAALK
                     EQGR"
     gene            1641..2174
                     /locus_tag="VLL76_06505"
     CDS             1641..2174
                     /locus_tag="VLL76_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HSV29188.1"
                     /translation="MISTAFAATADAHAAVPFYADAAFWVGVSFVMVVVMAFKPVSRA
                     LGAGLDARAAKIKARLDEAHKLREDAQEMLATYQRKQRDAMKEAEDIIAHAKAEAERL
                     SAQAAKDLDEQLKRREAQAMDRIAQAEAQALKEVQNLAVDVAIGAARQVLADNISGAQ
                     AAALLDASIQDLPKKFH"
BASE COUNT          383 a          792 c          709 g          451 t
ORIGIN      
        1 aaggattagg agaaggctct cgtggcaaac ccgattgagc aattcaagat caagccgatc
       61 attccgctcg agattggcgg cgtggacgtt tcgttcacca actcggcggt gatgatggtg
      121 atctcggtgg tgttgatcac cgcgttcctg accgtgtcgg tgcgctcgcg cgcgctggtt
      181 ccgggccgtt ggcagtcgat ggccgaggtc ttctacgaat tcgtggcgaa catgctgcgc
      241 gacaacgtgg ggtccgaggg gcgcaagtac ttccccttca tcttcacgct gttcatgttc
      301 gtgctgttcg gcaacctgct gggcatggtt ccgggcgcct tcacctacac cagccacgtc
      361 atcgtgacct tcggcatggc ggcggtggtg ttcctgggcg tcaccgtgat cggcttcgcc
      421 cgccacggcc tgcacttcct gcgcatgttc ttccccgagg gcgcgccgct ggcgaccgcc
      481 gtcatcctgg tgccgatcga gatcatctcg tacttctcgc gccccttcag cctcgccgtc
      541 cgtctgttcg ccaacatgac cgtcggccac atcatcctga aggtgctggg cggcttcgtc
      601 gtcgctctgg gcgggttcta cgtggttccc ggcatcgtcc cgttcgcctt cctgggcggc
      661 atcaccgtgc tcgagttcgg tatcgccctg ctgcaggcct acgtcttcac cattctctcc
      721 tgcatctacc tgcacgatgc cattcacatg cattgatcgg gtgtgcggct gagtttcagt
      781 agtctcgttt ttcttcctga ggagtcgaat aaatggatcc gcaagctgct aagttcatcg
      841 gtgctggcct ggccgccatc ggcatgatcg gttcgggtat cggcgtgggc aacatctggt
      901 cgaacctgat cgccaccgtc ggccgtaacc ccgccgccaa ggcgaacgtc gagctgtacg
      961 gctggatcgg cttcgccgtg accgaagcta tcgcgctgtt cgctctggtc gtcgcgctga
     1021 tggttctgtt cgcctaagtc tcgcgaacat ctccttcgga acggattggc gccgcggagc
     1081 ccccaagggt tccgcggccc tccggccggt ccgaagacaa gtttgattac cccgttcagg
     1141 agcatcggga tgccccagtt cgatccggcg ttcttcgcgc cccagctctt ctggctggca
     1201 atcaccttca tcactttgta tttcctgatg gcgaaggtgg ccctgccgaa gatcggcgcc
     1261 gtcctcgacg agcgtcagcg caagatcgac gacaatctcg acaaggccgc gcagttgaag
     1321 gccgaagccg aggccgccgt ggccgcctat gaaaaggcgc tggccgagtc ccggtctcat
     1381 gcccatgccg tcatcaagga gacggcagag cgtctggcca agcatgcgga agagcgcaac
     1441 aaggagctca acgccaagct ggccgatcag atcaaggccg gcgaggctcg catctccgcc
     1501 gccaaggaca ccgccctggc caacgtgcgc accgtcgccg tcgaggtcgc cggtgccgcc
     1561 atcgcccgtc tcaccggcgg ttcgaccgac cagaccgtgg tcgagtccgc cgtcgccgcc
     1621 gccctcaagg agcaaggccg atgatctcga ccgccttcgc cgccaccgcc gacgcgcacg
     1681 ccgccgtgcc gttctatgcg gatgccgcct tctgggtggg tgtttccttc gtcatggtcg
     1741 tggtcatggc cttcaagccg gtcagccgcg ccctgggcgc cggcctcgac gcccgcgccg
     1801 ccaagatcaa ggctcgcctc gacgaggctc acaagctgcg tgaggacgcc caggaaatgc
     1861 tggcgaccta tcagcgcaag cagcgtgacg ccatgaagga ggccgaggat atcatcgccc
     1921 acgccaaggc cgaggccgag cgtctgtccg cccaggccgc caaggacctg gacgagcaac
     1981 tcaagcgccg cgaggcccag gccatggacc gcatcgccca ggccgaggcc caggcgctca
     2041 aggaagtcca gaacctcgcc gtcgacgtcg ccatcggcgc cgcccgccag gttctcgccg
     2101 acaacatctc gggtgcccag gccgccgcgc tgctggacgc ctcgatccag gacctgccca
     2161 agaagttcca ctgagcttcc tccggcaacc ggaacgacga accccctcgg agcgatccga
     2221 gggggttttc gtttgtgatc catccccgtc atccccgcgc aggcggggag atggactcac
     2281 atttcaagcg cgacaccgag gttcacgtct atgccgagga aagcctccag gggtg
//
LOCUS       DATIKR010000413         3433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_66956, whole genome shotgun sequence.
ACCESSION   DATIKR010000413 DATIKR010000000
VERSION     DATIKR010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66956"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLL76_06510"
     CDS             complement(<1..296)
                     /locus_tag="VLL76_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015241153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HSV29189.1"
                     /translation="MPRVSYVNGRYVPHDEAVVHVEDRGYQFADGVYEVMAVVRGRLC
                     HLDQHMDRLGRSLGALAIPAPVPRRSLPFILAEVIRRNRVTSGIVYLQATRGVAR"
     gene            complement(298..1674)
                     /gene="trkA"
                     /locus_tag="VLL76_06515"
     CDS             complement(298..1674)
                     /gene="trkA"
                     /locus_tag="VLL76_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HSV29190.1"
                     /translation="MKVIVCGAGQVGFNIAHYLAGENNDVTVIDQRPELIRKISDTLD
                     VQAILGYASHPSVLEQAGAGDADMIIAVTHADEVNMVACQVAHSLFNVPTKIARVRSQ
                     SYLQPMWATLFSRDHLPIDVIISPEIEVARAITRRLQVPGALDVIPLANDKVRLIGVR
                     CTEMCPLINTPLRQLTVLFPDLNVVIIGIVRNGKALVPTAEDQMLEGDEVYFVVDTSQ
                     VERALAAFGSEEQESRRIVIFGGGNIGLFLAQQIEAEHPGASVKVIETNKERAEYVAK
                     TLHRTVVLHGDVLDPEILHEASVAAAETVVAVTNDDETNILAGLLAKRYGARRAMTLI
                     NKTTYNALMGPLGVDVVISPRAITVSNILQHVRRGRIHAVHSLHEGFGELIEADALET
                     SSLVGKPLRDVKLPNGVLLGAVVRDGQVISPRGNTVVQAGDRVVLFAAADAVKKVEKM
                     FSVRLEYF"
     gene            complement(1695..3101)
                     /locus_tag="VLL76_06520"
     CDS             complement(1695..3101)
                     /locus_tag="VLL76_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSV29191.1"
                     /translation="MAHDILIVDDEADIRALIAGILEDEGYSTREAGNSDAAIEAVRA
                     RRPSLVIQDIWLQGSNMDGLEILAAVKREHPEVPFVMISGHGTIETAVEAIKIGAYDF
                     IEKPFQTDRLLILVERAIDAARLRRENQELRLRVGNTAVGVADVVGQSPFVQQIRSAV
                     EKVAPTNSRVLITGPAGSGKEVVARIIHARSRREEGPFVVLNCAAMHPDRMEIELFGT
                     EHGHDGPDSPRKIGTFEQAHGGTLLLDEVADMPLETQGKIVRVLQDQTFERVGGGKRV
                     EVDVRVIASTNRDLQSEIAAGRFREDLFYRLNVVPIRVPSLRERKEDIPLLARHFMQL
                     AAQVAGVQPRPLGEDALAALQSYDWPGNVRQLRNVMDWLLIMAPGDSGEPVRADMLPS
                     EIGAITPAVLRWEKSSEIMTLPLREARELFEREYLLAQVNRFAGNISRTAAFVGMERS
                     ALHRKLKLLGVNTDDKRG"
     gene            complement(3091..>3433)
                     /locus_tag="VLL76_06525"
     CDS             complement(3091..>3433)
                     /locus_tag="VLL76_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29192.1"
                     /translation="VEAVRGREGADLPPGRVVLTLAQESGRIVLEVRDNGKGLPRENR
                     DRLTEPYVTTRAKGTGLGLAIVKKIMEDHGGDLYLEDAPGGGARVGVIFRTGEAANPA
                     TPSDQTAVHGA"
BASE COUNT          531 a         1126 c         1189 g          587 t
ORIGIN      
        1 cgggcgacgc cgcgggtggc ttgcagatag acgatgccgc tggtcacgcg gttgcggcgg
       61 atgacctcgg ccaggatgaa cggcagcgag cggcgcggca ccggggcggg aatggccagc
      121 gcacccaacg agcggcccag ccggtccatg tgctggtcca ggtggcagag gcggccccgg
      181 accaccgcca tgacctcgta gacgccgtcg gcgaattggt agccgcgatc ctcgacatgg
      241 accaccgcct cgtcatgggg aacgtagcgg ccgttgacgt aggaaacccg aggcacccta
      301 gaaatactcc agccggaccg agaacatctt ttccaccttc ttgaccgcgt cggcggcggc
      361 gaacagaacc acgcggtcgc cggcctgcac caccgtgttg ccgcgcgggc tgatgacctg
      421 gccgtcgcgc accacggcgc ccagcagcac gccgttgggc agcttgacgt cgcgcagcgg
      481 cttgcccacc agcgacgagg tctccagcgc gtcggcttcg atcagctcgc cgaagccctc
      541 gtgcaacgag tgcaccgcat ggatgcggcc gcgccggacg tgctgcagga tgttggacac
      601 ggtgatggcg cgcgggctga tgaccacatc gactcccagc ggccccatca aggcgttgta
      661 agtggtcttg ttgatcaggg tcatcgcccg ccgggcgcca tagcgcttgg cgagcagccc
      721 ggcgaggatg ttggtctcgt cgtcgttcgt gaccgccacc accgtctcgg ccgccgccac
      781 tgaggcctcg tgcaggattt cagggtccag cacgtcgcca tgcagcacca cggtgcggtg
      841 cagggtcttg gcgacgtatt cggcgcgttc cttgttggtc tcgatcacct tgaccgaggc
      901 gccgggatgc tcggcctcga tctgctgggc caggaacagc ccgatgttgc cgccgccgaa
      961 gatgacgatg cggcgcgatt cctgctcttc gctgccgaag gcggccagcg cgcgctcgac
     1021 ctggctggtg tcgaccacga aatagacctc gtcgccttcc agcatctggt cctcggcggt
     1081 cggcaccagg gccttgccgt tgcggacgat gccgatgatg acgacgttga ggtcggggaa
     1141 cagcaccgtc aactggcgca acggggtgtt gatcagcggg cacatctcgg tgcagcgcac
     1201 gccgatcagg cggaccttgt cgttggccag cggaatgacg tcgagcgcgc cgggcacctg
     1261 caaccggcgc gtgatggcgc gggcgacctc gatctcgggg ctgatgatga cgtcgatggg
     1321 caggtggtcg cgcgaaaaaa gcgtcgccca catgggctgc agataggatt gcgagcgcac
     1381 gcgcgcgatc ttggtgggca cgttgaacag cgagtgcgcc acctggcagg cgaccatgtt
     1441 gacttcgtcg gcatgagtca ccgcgatgat catgtcggcg tcgccggccc ccgcctgctc
     1501 cagcaccgac ggatgcgagg cgtagcccag gatggcctgg acgtcgaggg tgtccgagat
     1561 cttgcggatc agctcggggc gctggtcgat gaccgtgacg tcgttgttct cgccggcgag
     1621 gtaatgggcg atgttgaagc cgacttggcc ggctccgcag acgatgacct tcatgccgat
     1681 cccctgtctt ccctttaccc gcgcttgtcg tcggtgttga cgcccaaaag cttgagcttg
     1741 cggtgcagcg ccgagcgttc catgcccacg aaggcggcgg tgcgcgaaat gttgccggcg
     1801 aaccggttga cctgcgccaa taggtattcg cgctcgaaca gctcgcgggc ttccctcagc
     1861 ggcagggtca tgatctcgct ggatttctcc cagcgcaaga ccgccggcgt gatggcgccg
     1921 atttcgctgg gcagcatgtc ggcccgcacc ggctcgcccg agtctccggg agccatgatc
     1981 agcagccagt ccatgacgtt gcgcaactgg cgcacgttgc ccggccagtc atagctttgc
     2041 agcgccgcca gggcgtcctc gcccagcggg cgcggctgca cgccggccac ctgggccgcc
     2101 agttgcatga aatggcgggc cagcagcggg atgtcttcct tgcgctcgcg caacgacggc
     2161 acccggatcg gcaccacgtt gaggcgatag aacaaatcct cgcggaagcg cccggcggcg
     2221 atctcggatt gcaggtcgcg gttggtgctg gcgatgacgc ggacgtcgac ctcgacccgc
     2281 ttgccgccgc cgacccgctc gaaggtctgg tcctgcagca cccgcacgat cttgccctgg
     2341 gtctccagcg gcatgtcggc gacctcgtcc agcagaaggg tgccgccgtg ggcctgctcg
     2401 aaagtgccga tcttgcgagg cgagtccggg ccgtcgtggc cgtgctcggt gccgaacagc
     2461 tcgatctcca tgcggtcggg atgcatggcg gcgcagttca gcaccacgaa cgggccttcc
     2521 tcgcgacgcg agcgggcatg gatgatgcgc gcgacgactt ccttgcccga gccggccggg
     2581 ccggtgatca gcacgcggga attggtgggc gccaccttct cgacggccga gcggatctgc
     2641 tggacgaagg gcgactggcc gaccacgtcg gcgacgccta cggcggtgtt gccgacccgc
     2701 aggcgcagtt cctggttctc gcggcgcagc cgggcggcgt cgatggcgcg ctcgaccagg
     2761 atcagcaggc ggtcggtctg gaacggcttt tcaatgaagt cgtaggcgcc gatcttgatg
     2821 gcctcgacgg cggtttcgat ggtgccgtgg cccgagatca tcacgaacgg cacttccggg
     2881 tgctcgcgct tgacggcggc caggatctcc aggccgtcca tgttcgagcc ctgcagccag
     2941 atgtcctgga tgaccagact gggccggcgg gcgcgcacgg cctcgatcgc ggcgtcggaa
     3001 ttgccggctt cgcgggtgga ataaccttcg tcttcgagaa tgccggcgat gagggcgcgg
     3061 atatcggcct cgtcgtcgac gatcaggatg tcatgcgcca tgtacagccg tctggtcgga
     3121 gggcgtcgcg gggttcgcgg cttcgccggt tcggaagatc acaccgacgc gggcgccgcc
     3181 cccgggggcg tcctccaggt aaaggtcacc gccatggtct tccatgattt tcttgacgat
     3241 ggcaagacct aatccggtgc ccttggcgcg ggtggtgaca tacggctcgg tcaggcggtc
     3301 gcggttctcg cgcggcaggc ccttgccgtt gtcgcgcacc tccaggacga tccggccgga
     3361 ttcctgggcc agggtcagca ccacccggcc gggcggcaaa tcggcccctt cccgcccgcg
     3421 cacggcctcg acc
//
LOCUS       DATIKR010000414         2285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_187243, whole genome shotgun sequence.
ACCESSION   DATIKR010000414 DATIKR010000000
VERSION     DATIKR010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187243"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /gene="surE"
                     /locus_tag="VLL76_06530"
     CDS             complement(<1..748)
                     /gene="surE"
                     /locus_tag="VLL76_06530"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HSV29193.1"
                     /translation="MFAPITDLSEARILVSNDDGINAPGIKVLEKIARSISKDVWVVA
                     PEHEQSAAGHSLTIRRPLRVRQVSRRRFAVDGTPTDAVLLGVNHVLAGKKPHLVLSGV
                     NRGANLGEDVTYSGTVAAAMEATILGIPSIAFSQYYTPDHPMRWSTAEHWPPEIIRRV
                     TSVGWGRNVLINVNFPDVPHGSVTGIEVTCQGKRKIGDALSERLDPRGEPYIWIGAQR
                     AEDRSTPGTDIEAVCRGAISVTPLCVDLTDR"
     gene            complement(751..2013)
                     /gene="serS"
                     /locus_tag="VLL76_06535"
     CDS             complement(751..2013)
                     /gene="serS"
                     /locus_tag="VLL76_06535"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSV29194.1"
                     /translation="MHDLKAIRENPAAFDAGLARRGLEPLSGRVLELDAKRRAAQTRF
                     QELQARRNEVSKQIGILKKQGQDAAAAMAEVAQLKEQIPAIEEEDKALGVEIDAILAA
                     IPNIPADDVPDGPDEDHNVEIRRWGAPRAFAFKPLEHDAIGEKLGLMDFEGAAKLSGA
                     RFVVLKGALARLERALANFMLNVQTEEHGYLEVNPPTLVKDEPLFGTGQLPKFGDDLF
                     KTNTGHWLIPTAEVPLTNLVGDSIIDEAKLPLRMTALTACYRSEAGAAGKDTRGMIRQ
                     HQFWKVEMVSIAHPDASDAEHERMTQCAETILQRLGLPYRTIVLCTGDMGFSARKTFD
                     IEVWLPGQDRYREISSCSNCGDFQARRMKARFKSDKGNRLVHTLNGSGLAVGRTLVAV
                     LENYQQADGSVVVPEVLRPYMGGIEVIR"
     gene            complement(2082..>2285)
                     /locus_tag="VLL76_06540"
     CDS             complement(2082..>2285)
                     /locus_tag="VLL76_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29195.1"
                     /translation="GEPGTSHVLALVHDRLLGLVGRRHTDAEAFAETFDERVGPEGAR
                     DLLDVALLSLAELEAEQGQLMVA"
BASE COUNT          358 a          763 c          787 g          377 t
ORIGIN      
        1 cgcggtcggt cagatcgacg cacagcggcg tcaccgaaat ggcgccacgg cacaccgctt
       61 cgatgtcggt gccgggcgtc gagcggtcct cggcgcgctg cgcaccgatc cagatatagg
      121 gttcgccgcg cggatcaaga cgctcggaca gggcatcgcc gatcttgcgc ttgccctggc
      181 aggtcacctc gatgccggtg accgacccgt gcggcacgtc ggggaagttg acgttgatca
      241 gcacgttgcg accccagccg accgaagtga cgcggcggat gatctcgggc ggccaatgct
      301 cggcggtgga ccagcgcatg ggatggtcgg gggtgtaata ctgactgaag gcgatggacg
      361 ggatgcccag gatggtcgcc tccatggcag ccgccacggt gccggaatag gtcacgtcct
      421 cgcccaaatt ggcgccgcgg ttgacgcccg acagcaccag atgcggcttc ttgccggcca
      481 gcacgtggtt gacgcccagc agcaccgcat cggtcggcgt gccgtccacg gcaaagcgcc
      541 gccgcgacac ctggcgcacc cgcaagggcc ggcggatggt cagggaatgg ccggcggccg
      601 attgctcgtg ctcgggcgcc accacccaca cgtccttcga gatcgaacgg gcgatcttct
      661 ccagcacctt gatgccgggc gcgttgatgc cgtcgtcgtt ggagacgagg atgcgtgctt
      721 ccgacaggtc cgtgatgggc gcgaacatgg tcagcggatc acctcgatcc cgcccatgta
      781 cgggcgcagg acttccggca ccaccaccga gccgtcggcc tgctggtagt tctccagcac
      841 cgcgaccagg gtacggccga ccgccaggcc cgagccgttg agcgtgtgga ccaggcggtt
      901 gcccttgtcg gacttgaagc gcgccttcat gcgccgcgcc tggaagtcgc cgcaattgga
      961 gcaggacgag atctcgcgat agcggtcctg gcccggcaac cacacctcga tgtcgaaggt
     1021 cttgcgggcc gagaagccca tgtcgccggt gcacagcacg atggtgcggt acggcaggcc
     1081 caggcgctgc aggatggtct cggcgcattg cgtcatgcgc tcgtgctcgg catccgaggc
     1141 atcgggatgg gcgatggaca ccatctcgac cttccagaac tggtgctggc ggatcatgcc
     1201 gcgcgtgtcc ttgccggcgg cgcccgcctc cgagcggtag caggcggtca gcgccgtcat
     1261 gcgcaacggc agcttggcct cgtcgatgat gctgtcgccc accaggttgg tcagcggcac
     1321 ctcggcggtg gggatcagcc agtggccggt gttggtcttg aacaaatcgt cgccgaactt
     1381 gggcaactgg ccggtgccga acagcggttc gtccttgacc agggtcggcg ggttgacctc
     1441 gagatagccg tgctcttcgg tctggacgtt gagcatgaaa ttggcgagcg cgcgttccag
     1501 ccgcgccaag gcccccttca gcaccacgaa gcgggcgccc gacagcttgg cggcgccctc
     1561 gaaatccatc aggcccagct tctcgccgat ggcgtcgtgc tccagcggct tgaaggcgaa
     1621 ggcgcgcggc gccccccagc gacggatctc gacgttgtgg tcctcgtcgg ggccgtcggg
     1681 cacgtcgtcg gcggggatgt tggggatggc ggccaggatg gcgtcgatct cgacgcccag
     1741 cgccttgtcc tcttcctcga tggcggggat ctgttccttg agctgcgcca cctcggccat
     1801 ggcggcggcg gcgtcctggc cctgcttctt caggatgccg atctgcttgg acacttcgtt
     1861 gcggcgcgcc tgcaactcct ggaaccgggt ctgggcggcg cggcgcttgg cgtcgagctc
     1921 gagcacccgt cccgacaacg gctcaagccc acggcgggcc aggccggcat cgaaggcggc
     1981 ggggttttcg cgaatagcct tgagatcgtg catggaagcc catccggtga agcgcggaac
     2041 ggatggctta taggacagcc cggagtcgct gtcgaggccc ctcaggccac catcaactgg
     2101 ccctgctccg cttccagttc cgccagcgac agcagcgcca catccagcag atcgcgcgcc
     2161 ccttccggac cgacccgctc gtcgaaggtc tcggcgaacg cctcggcgtc ggtgtggcgg
     2221 cgaccaacca aaccgagcag gcggtcatgc accagcgcca ggacgtgcga cgtgcccggc
     2281 tcgcc
//
LOCUS       DATIKR010000415         2258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175805, whole genome shotgun sequence.
ACCESSION   DATIKR010000415 DATIKR010000000
VERSION     DATIKR010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175805"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VLL76_06545"
     CDS             <1..330
                     /locus_tag="VLL76_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HSV29196.1"
                     /translation="NIDGEALLWAHDRLIGRPEQRRILMVISDGAPVDDSTLSVNPGN
                     YLEKHLRDVIAYVETRSPVELVAIGIGHDVTRYYRRAVTIMDAEELGGTMMRQLTALF
                     DEDERLA"
     gene            complement(646..>2258)
                     /locus_tag="VLL76_06550"
     CDS             complement(646..>2258)
                     /locus_tag="VLL76_06550"
                     /inference="COORDINATES: protein motif:HMM:NF019315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29197.1"
                     /translation="TPADWVLAFGEPDIDDVRVFVPQGDGFAEQKLGRRIPNSQLALA
                     GLRHLARLDLPEGRPLTVLVRLESQHKIRFEQAALWRPDALMTDEARQAGQFGLQFGI
                     MAVLVLVYGLFGLWLRDGPMLVYALFVATRLGRGMTHSGLVTLVFPDAGRGVNYLLGG
                     IGLMGGIAAFIVMWDRILDLRRNFPRMHRAYMGAGGFVAVSLLFVGSPDFKLFVPPAQ
                     AIMFAASIANIVMAALLVRRNPGDVLLKFYLFAFLPLVLAWGAEVAAMVTPLVPADWG
                     RGIDVTATMGHIAILSVALAYRLGQIQRQRMGAEIALAGERLARQRQRTFVDMATHEF
                     KTPLAVIDSAAQMLEMLTAPARAEVGDRLATIRRAVQRLVKLVETCLADDRDQVMAAK
                     LLPADPAAIVHLAAERNREGGEIVVRAASLPDAIRADAALLGIALDALIDNARRYGPA
                     GQAVELSATAEDGRVAFAVHDRGPGIPPGEADRIFDKYYRGITSGPVPGTGIGLHLVK
                     TIAELHGGTVTYVPRDGGGASFVVTVPA"
BASE COUNT          374 a          761 c          789 g          334 t
ORIGIN      
        1 aacatagacg gcgaggcgct gttgtgggcc cacgaccgcc tgatcggccg gcccgagcag
       61 cgccgcatcc tgatggtgat ctcggacggc gccccggtgg acgattccac gctgtcggtc
      121 aatcccggca attacctgga aaagcacctg cgcgacgtca tcgcctatgt cgagacccgc
      181 tcgccggtcg agctggtcgc catcggcatt ggccacgacg tcacccgcta ctatcgccgc
      241 gccgtcacca tcatggacgc cgaggaactg ggcggcacca tgatgcgcca actgacggcg
      301 ctgttcgacg aggacgaacg cttggcgtaa agccgaagat gtagccccgg tcacgcttta
      361 ttcacttgcg tggccggggc cgtctgtcgt ttcatccgca aaacggtatg gctaaacttg
      421 atccggcccg cgctgccaag cgcgggcttt cttttttggt tcatcgcgca ttagcgggga
      481 gcttatcgct cgtcatgcgc gggcttgacc cgcgtatcca cgcggcaccg caaagtccgg
      541 cgcggaaatg cctggtgaga cggagccacg tggatgcccg tgtcaagcac gggcatgacg
      601 gagggtaaca ggcgccttct ccggaattcc tcgatgaacc tctttttaag ccggcaccgt
      661 caccacgaac gacgcgccgc cgccgtcgcg cggcacatag gtcaccgtgc cgccgtgcag
      721 ttcggcgatg gtcttgacca gatgcaggcc gatgccggtg ccggggaccg ggccgctggt
      781 gatgccgcga taatatttgt cgaagatgcg gtcggcctcg cccggcggga tgccggggcc
      841 gcggtcgtgg acggcgaagg cgacgcggcc gtcctcggcg gtggcggaca actcgacggc
      901 ctggccggcg gggccatagc ggcgggcgtt gtcgatcagg gcatccagcg cgatgcccag
      961 cagggcggca tcggcccgga tggcgtcggg caggctggcg gcccgcacca cgatctcgcc
     1021 gccctcgcgg ttgcgctcgg cggccaggtg gacgatggcg gcggggtcgg ccggcagcag
     1081 cttggccgcc atcacctggt cgcggtcgtc ggccaggcag gtttccacca gcttgaccag
     1141 ccgctgcacg gcgcggcgga tggtggcgag gcggtcgccg acctcggcgc gggccggcgc
     1201 ggtcagcatt tccagcatct gggcggcgct gtcgatcacc gccagcggcg tcttgaattc
     1261 gtgggtcgcc atgtcgacga aggtgcgctg gcgctggcgc gccagccgtt cgccggccag
     1321 ggcgatctcg gcgcccatgc gctggcgctg gatctggccc agccgatagg ccagggcgac
     1381 gctgaggatg gcgatgtggc ccatggtggc ggtcacgtcg atgccgcgcc cccaatcggc
     1441 cggcaccagc ggcgtcacca tggctgccac ctcggcgccc caggccagca ccagtggcag
     1501 gaaggcgaac agatagaatt tgagcagcac atcgcccgga ttgcgccgca ccagcagcgc
     1561 cgccatgacg atgttggcga tgctggccgc gaacatgatg gcctgggccg gcggcacgaa
     1621 cagcttgaag tcggggctgc cgacgaacag cagcgacacc gccacgaagc cgcccgcgcc
     1681 catgtaggcc cggtgcatgc ggggaaaatt gcggcgcagg tcgaggatgc ggtcccacat
     1741 aacgatgaag gcggcgatgc cgcccatcag gccgatcccg cccagcagat agttgacgcc
     1801 gcgcccggca tcagggaaca ccagggtgac caggccggaa tgggtcatgc cccggcccag
     1861 gcgggtggcg acgaacaggg catagaccag catcggcccg tcgcgcagcc acagcccgaa
     1921 caggccgtag accagcacca gcacggccat gatgccgaat tgcaggccga actgccccgc
     1981 ctgccgcgcc tcgtcggtca tcaaggcatc ggggcgccac aacgcggcct gctcgaagcg
     2041 gatcttgtgc tgcgattcca gccggaccag cacggtcagc ggccggccct cgggcaggtc
     2101 cagcctggcc aggtgacgca gcccggccaa ggccaactgg ctgttgggga tgcgccggcc
     2161 cagtttctgc tcggcgaagc cgtcgccctg gggcacgaag acgcggacgt cgtcgatgtc
     2221 gggctcgccg aacgccagca cccaatcggc gggcgtcc
//
LOCUS       DATIKR010000416         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_30059, whole genome shotgun sequence.
ACCESSION   DATIKR010000416 DATIKR010000000
VERSION     DATIKR010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30059"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..664
                     /gene="cobO"
                     /locus_tag="VLL76_06555"
     CDS             59..664
                     /gene="cobO"
                     /locus_tag="VLL76_06555"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HSV29198.1"
                     /translation="MTEDIEQRHKDKMAKKKASRDKLMAKKQGAKGLVIVHTGPGKGK
                     STAAFGMAVRCVGHGFKVGIVQFIKGAWDTAERRVMEGLGELVTFKAMGEGFTWETQD
                     RTRDIAAAERAWETAAAMLADPAYRMVILDEINVALRYDYLPWETVQAAIAARPEGQH
                     VVLTGRNASPQLMEAADLVTEMTMVKHPFREGIKAQPGVEF"
     gene            complement(668..>1774)
                     /locus_tag="VLL76_06560"
     CDS             complement(668..>1774)
                     /locus_tag="VLL76_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HSV29199.1"
                     /translation="GAYRFSVAWPRVLPRGRGAVNQAGLDFYDRLIDGVLAAGIEPWL
                     CLYHWDLPQALHEQGGWTNRDIAGWFADYALLIARRFGDRVKHFATFNEPNVSTLFGY
                     GHMGWCAPGIQDRPAYLRAAHHLNLSHGAAVDVLRDLVPGCSIGIVHNRQAVHPEAEK
                     DADAAALLDAHWNLVYADPQILGHYPAIVAADFEPYVRPGDLARICRPLDWFGINHYG
                     PIWAKDDPTTPMGFGWGGDPEAKPHPDIGWAIYPEAFTEELLLVHRRYGLPIYVTENG
                     CGSDKEQADANGFVHDRHRLTYLDLYTQRMREAMDKGADVRGYFVWSLLDNFEWGSGY
                     GNRFGIVRVDFETLKRTPKASFQWYADLVKAQRG"
BASE COUNT          321 a          579 c          613 g          261 t
ORIGIN      
        1 gatcgccgcg aagaccctca ttgcccttgc ccctgacaga ccctggaaag cgacggttat
       61 gaccgaagac atcgagcagc gccacaagga caagatggcc aagaaaaagg ccagccgcga
      121 caagctgatg gcgaagaagc agggcgccaa ggggctggtg atcgtccata ccggccccgg
      181 caagggcaag tccaccgccg ccttcggcat ggcggtgcgc tgcgtcggcc acggcttcaa
      241 ggtcggcatc gtccagttca tcaagggcgc ctgggacacc gccgagcgcc gggtgatgga
      301 aggcctgggc gaattggtga ccttcaaggc catgggcgag ggcttcacct gggagaccca
      361 ggaccgcacc cgcgacatcg ccgccgccga acgggcgtgg gaaaccgccg ccgccatgct
      421 ggccgatccc gcctatcgca tggtcatcct cgacgagatc aacgtcgcgc tgcgctacga
      481 ctacttgccg tgggagacgg tgcaggccgc catcgccgcc cgccccgagg gccagcacgt
      541 ggtgctgacc ggccgcaacg cctcgcccca actgatggag gcggcggacc tggtcaccga
      601 gatgaccatg gtcaagcacc ccttccgcga gggcatcaag gcccagccgg gggtggagtt
      661 ctgagcctca cccccgctgc gccttgacca ggtcggcata ccattggaac gacgccttgg
      721 gcgtccgttt cagggtctcg aagtccaccc gcacgatgcc gaagcggttg ccgtagccgg
      781 aaccccattc gaaattgtcc agcagcgacc acacgaaata gccgcgcacg tcggcgccct
      841 tgtccatggc ctcacgcatg cgctgcgtgt agaggtcgag ataggtcagg cggtgccggt
      901 cgtggacgaa gccgttggca tcggcctgtt ccttgtcgct gccgcagccg ttctcggtga
      961 cgtagatggg caggccgtag cggcggtgaa ccagcagcaa ttcctcggtg aacgcctcgg
     1021 gatagatggc ccagccgatg tcgggatggg gcttggcctc ggggtcgcca ccccagccga
     1081 agcccatggg ggtggtgggg tcatccttgg cccagatggg gccgtaatgg ttgattccga
     1141 accagtccag cggccggcag atgcgggcca ggtcgccggg gcggacataa ggttcgaaat
     1201 cggccgccac gatagcgggg taatggccca gaatctgcgg gtcggcgtag accaggttcc
     1261 aatgggcgtc gagcaaggcc gccgcgtcgg cgtccttctc agcctcggga tggacggcct
     1321 ggcggttgtg gacgatgccg atcgagcagc cgggcaccag gtcgcgcagc acgtccaccg
     1381 ccgcgccgtg cgacagattg aggtgatggg cggcccgcag ataggccggg cggtcctgga
     1441 tgccgggcgc gcaccagccc atgtggccat agccgaacag ggtgctgacg ttgggctcgt
     1501 tgaaggtggc gaaatgcttg acgcggtcgc cgaagcggcg cgcgatcaac aatgcgtaat
     1561 cggcgaacca gccggcgatg tcgcggttgg tccagccgcc ctgctcgtgc agcgcctgcg
     1621 gcaggtccca atggtacagg cacagccacg gctcgatgcc ggccgccagc accccgtcga
     1681 tcagcctgtc gtagaagtcg aggccagcct ggttgacggc gccgcgcccg cgcggcagca
     1741 cgcgcggcca cgccaccgag aagcgatagg cacc
//
LOCUS       DATIKR010000417         1966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79225, whole genome shotgun sequence.
ACCESSION   DATIKR010000417 DATIKR010000000
VERSION     DATIKR010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79225"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VLL76_06565"
     CDS             complement(<1..827)
                     /locus_tag="VLL76_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSV29200.1"
                     /translation="MRDARINYAVVGAFVLVMLVAGAVVVALLTGRTGSADTYFTHLN
                     NVTGVKYGTKVTYEGFVVGQVEDIAPLRAEGKTRFRVKVSVREGWGIPADSVARVAAS
                     GILAAVAIDIKGGTAEAMLQPGAEIPGGPSANIFAVMNEVAGQVSDLNQNALKPLLAT
                     LNLRADALGKVLEQQAPEILANIAAITTDLATKTPRISADVERMTNTLSTKVVNQPNA
                     ERIAQSIDNVADLTAGLKESRHKVDAVLTSLDKVVTGNRHEMDAAIKDLRYTLQAVAR
                     "
     gene            complement(824..1630)
                     /locus_tag="VLL76_06570"
     CDS             complement(824..1630)
                     /locus_tag="VLL76_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29201.1"
                     /translation="MTSCIEVRNLNTHYGDRAILKNVNLDVKDGEIMVIMGGSGSGKT
                     TLLNHLLGLLKPTSGSIRLLGKDINSIGPLELQELRTRMGVAFQSGALFSSMTVGENI
                     ALPLREHTELDETTIGIVTRLKLEVVSLAGFEDLMPSELSGGMIKRAALARAIVMDPK
                     MLFCDEPSAGLDPVVASSIDDLILRLRDAMGMSIVVVTHDLDSAFKIADRICVLDKGD
                     VLALDTVDAIRASPNERIQNLLNRRTEEAEIDPDAYLKRLLGDKARKHES"
     gene            complement(1806..1955)
                     /locus_tag="VLL76_06575"
     CDS             complement(1806..1955)
                     /locus_tag="VLL76_06575"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV29202.1"
                     /translation="MLVTVVGVVNGASVTGGAEGVGRMTTRSVVHAISAIIITDMVFA
                     FMVTR"
BASE COUNT          300 a          650 c          661 g          355 t
ORIGIN      
        1 cgggccaccg cctgcagggt gtagcgcaaa tccttgatgg cggcgtccat ctcgtggcgg
       61 ttgccggtga ccaccttgtc cagcgaggtc agcaccgcat ccaccttgtg gcggctttcc
      121 ttgaggccgg cggtcaggtc ggcgacgttg tcgatggact gggcgatgcg ttcggcattg
      181 ggctggttga ccaccttggt ggacagcgtg ttggtcatgc gctcgacgtc ggcagagatg
      241 cgcggcgtct tggttgccag atcggtggtg atggcggcga tgttggccag gatctcgggc
      301 gcctgctgtt ccagcacctt gcccagcgcg tcggcgcgca ggttcagcgt cgccagcaac
      361 ggcttcaggg cattctggtt gaggtcagac acctggccgg cgacctcgtt catcaccgcg
      421 aagatgttgg ccgaggggcc gccggggatt tcggcgccgg gctgcagcat ggcctcggca
      481 gtgccgccct tgatgtcgat ggcgacggcg gccaggatgc ccgaggcggc cacccgcgcc
      541 actgaatcgg ccggaatgcc ccagccctcg cgcacgctga ccttgaccct gaagcgggtc
      601 ttgccctcgg cgcgcagggg cgcgatgtcc tcgacctggc cgaccacgaa gccctcgtag
      661 gtgaccttgg tgccgtattt cacgccggtg acgttgttga ggtgggtgaa ataggtgtcg
      721 gccgagccgg tgcggccggt cagcagcgcc accaccacgg cgccggccac cagcatcacc
      781 agcacgaacg cccccacgac ggcgtagttt atccgggcat ccctcatgac tcgtgcttcc
      841 tggccttgtc gccgagcagg cgtttcaaat aggcgtccgg gtcgatctcg gcttcctcgg
      901 tgcgccggtt cagcaaattc tggatgcgct cgttgggcga ggcgcggatg gcgtccaccg
      961 tatcgagcgc cagcacgtcg cccttgtcga gcacgcagat gcggtcggcg atcttgaacg
     1021 ccgaatcgag gtcgtgggtc accaccacga tgctcatgcc catggcgtcg cgcagccgca
     1081 ggatcagatc gtcgatgctg gacgccacca ccggatcgag gccggcggac ggctcgtcgc
     1141 agaacagcat cttggggtcc atgacgatgg cgcgggccag cgcggcgcgc ttgatcatgc
     1201 cgcccgacag ctcggacggc atcagatcct cgaacccggc caggctgacg acctccagct
     1261 tcaggcgggt gacgatgccg atggtggtct cgtccagctc ggtatgctca cgcaacggca
     1321 gggcgatgtt ctcgcccacc gtcatcgacg agaacagcgc gcccgactgg aaggcgacgc
     1381 ccatgcgggt gcgcaattcc tgcagctcca gcggcccgat ggaattgatg tccttgccca
     1441 gcaggcggat gctgcccgag gtcggcttga gcaggccgag caggtggttg agcagggtgg
     1501 tcttgcccga acccgacccg cccatgatca ccatgatctc gccgtccttc acgtcgagat
     1561 tgacgttctt gaggatggcg cggtcgccgt aatgggtgtt gaggttcctc acctcgatgc
     1621 aggaagtcat gcgatggccc tcaaacgccg ggcgggcgca tccgcgccct tgtgggcgaa
     1681 gcccacactc cgcattcgct ccgtgccgcc ctttgggcgt cgtttgcccc ttcggggcgg
     1741 cacggctttc gctcgcatgg gctcgcgggg cctcaacggc ccagtccctc gctgcgctcg
     1801 ctccgtcatc gcgtcaccat gaaggcgaac accatgtcgg tgatgatgat ggccgagatg
     1861 gcgtgcacca ccgaccgcgt ggtcatgcgc cccacgccct cggcgccgcc ggtgaccgag
     1921 gcgccgttga ccacgccgac caccgtcacc agcacggcaa agatgg
//
LOCUS       DATIKR010000418         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79240, whole genome shotgun sequence.
ACCESSION   DATIKR010000418 DATIKR010000000
VERSION     DATIKR010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79240"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1552)
                     /locus_tag="VLL76_06580"
     CDS             complement(<1..>1552)
                     /locus_tag="VLL76_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HSV29203.1"
                     /translation="PGPDFPTGGTILGRAGIRSAYTTGRGSVIMRGRCHVEEIRKDRE
                     AIVVTEVPYQVNKARMLEQIAELVRDKKIEGVSDLRDESDRDGVRVVIEIKRDAIADV
                     VLAQLYKFTPLQTSFGVNALALNGGRPEMMPLREIIKAFVAFREEVITRRTIYELGKA
                     RERAHVLAGLAIAVANIDQVIALIRSAPDPATAREQLMARDWPVGDVEPLIRLIDEPG
                     RGIVEGCYKLSEIQAKAILDLRLHRLTGLERDKIGDELREIGDQIKEFLEILSSRPKL
                     MEVLRGELIEARNQFATPRRTTIEDAEFEHDIEDLIAREDMVVTVTNTGYIKRVPLST
                     YRAQKRGGKGRSGMSMKDEDFLNQVFVTSTHTPVLFFSSTGIAYKLKVYRLPLGAPQA
                     KGKALVNILPLDEGETISTVMPLPEDESTWGNLHVVFATSNGDVRRNLLSDFVDIRAN
                     GKIAMKLGEGERLIAVQPCSENDDVLLATRQGKAIRFQVTDVRVFKGRDSTGVRGIRL
                     DGDEVISMS"
BASE COUNT          228 a          503 c          539 g          282 t
ORIGIN      
        1 gacatggaga tgacttcgtc gccatccagc cggatacccc gaacgcccgt ggaatcgcgg
       61 cctttgaaca cgcgcacgtc ggtgacctgg aagcggatcg ccttgccctg gcgggtcgcc
      121 agcagcacgt cgtcgttttc cgagcacggc tgcacggcga tcaggcgttc gccctcgccc
      181 agcttcatgg cgatcttgcc gttggcgcgg atgtccacga agtcggacag caggttgcgc
      241 cgcacgtcgc cgttcgaggt ggcgaacacc acgtgcaggt tgccccaggt gctttcgtcc
      301 tcgggcagcg gcatgacggt cgagatggtc tcgccttcgt ccagcggcag gatgttgacc
      361 agcgccttgc ccttggcctg gggtgcgccc agcggcaggc ggtagacctt gagcttgtag
      421 gcgatgccgg tggacgagaa gaacagcacc ggcgtgtggg tgctggtcac gaacacctgg
      481 ttgaggaaat cctcgtcctt catgctcatg cccgagcggc ccttgccgcc gcgcttctgg
      541 gcgcggtagg tcgacagcgg gacgcgcttg atgtagccgg tgttggtcac cgtcaccacc
      601 atgtcctcgc gggcgatcag gtcctcgatg tcgtgctcga actcggcgtc ctcgatggtg
      661 gtgcgccggg gcgtggcgaa ctggttgcgc gcctcgatca actcgccgcg cagcacctcc
      721 atcagcttcg ggcgcgacga caggatctca aggaattcct tgatctggtc gccgatctcg
      781 cgcagttcgt cgccgatctt gtcgcgctcg agcccggtca ggcggtgcag gcgcaggtcc
      841 aggatggcct tggcctggat ctcggacagc ttgtagcagc cctcgacgat gccgcggccg
      901 ggctcgtcga tcagccggat cagcggctcg acgtcgccca ccggccagtc gcgcgccatc
      961 aactgctcgc gggcggtggc gggatcggga gccgaacgga tcagggcgat gacctggtcg
     1021 atgttggcca ccgcgatggc caggccggcc aacacgtggg cccgctcgcg cgccttgccc
     1081 agttcataga tggtgcggcg ggtgatgacc tcttcgcgga aggcgacgaa cgccttgatg
     1141 atctcgcgca gcggcatcat ctcggggcgg ccgccgttga gcgccagggc gttgacgccg
     1201 aacgaggtct gcagcggggt gaacttgtag agctgcgcca gcaccacgtc ggcgatggcg
     1261 tcgcgcttga tctcgatcac cacgcgcacg ccgtcgcggt cggattcgtc gcgcaggtcc
     1321 gacacgccct cgatcttctt gtcgcgcacc aactcggcga tctgctcgag catgcgcgcc
     1381 ttgttgacct gatagggcac ttcggtgacc acgatcgctt cgcggtcctt gcggatctcc
     1441 tcgacgtggc agcggccgcg catgatcacc gagccgcgcc cggtggtgta ggcggagcgg
     1501 atgccggcgc ggcccaggat ggtgccgccg gtggggaaat cggggccggg ca
//
LOCUS       DATIKR010000419         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175861, whole genome shotgun sequence.
ACCESSION   DATIKR010000419 DATIKR010000000
VERSION     DATIKR010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175861"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..612
                     /locus_tag="VLL76_06585"
     CDS             22..612
                     /locus_tag="VLL76_06585"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSV29204.1"
                     /translation="MEKPIKGTRLALVGAALALVVAVAVALWVVGPGRNLSYTGSPGN
                     PSMTGGAIAALPAAQRSAPPALPFTDAHGRALDVAAFKGKVVLVNLWATWCPPCVAEM
                     PSMDALARRLGGDRFQVVAVSLDRGGAPVVARWFERNDIKALGIYLGSSADYQGALLP
                     TSYLIDTQGRVAWQGSGAKDWDSPEAVAMVEGLMAE"
     gene            complement(795..1214)
                     /locus_tag="VLL76_06590"
     CDS             complement(795..1214)
                     /locus_tag="VLL76_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HSV29205.1"
                     /translation="MTMVTIRPYSQALDRLRAAGLRPTRQRLALARLLFDAGDRHMSA
                     EQLHSEALTNNIRVSLATVYNTLHQFTDAGLLREIVVDAGRSYFDTNTTDHHHFFFEK
                     SGKLCDIPAEMVGLTRIPEAPEGFNISRVEVIVRVDG"
     gene            complement(1316..>1559)
                     /locus_tag="VLL76_06595"
     CDS             complement(1316..>1559)
                     /locus_tag="VLL76_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29206.1"
                     /translation="GAAALAVGAALVGAGAGAGLGVGLGRIYDKRTAERFHDQIEKGG
                     ILVWVRCHDDQSESRAGEIMQRHGAHHVHAHTLRPT"
BASE COUNT          250 a          509 c          542 g          258 t
ORIGIN      
        1 gctcatggaa tcctaggacc gatggagaaa ccaatcaaag gcacaaggct cgccctggtc
       61 ggcgccgcgc tcgcgcttgt ggtcgcggtg gcggtggcgc tgtgggtggt cgggcccggc
      121 cggaacctaa gctacaccgg ttcgcccggc aacccaagca tgacgggggg cgccatcgcc
      181 gccctgcccg ccgcccaacg atccgccccg ccggccctgc ccttcaccga cgcccacggc
      241 cgcgccctcg acgtggcggc gttcaagggc aaggtggtgc tggtcaatct gtgggcgacc
      301 tggtgcccgc cctgcgtcgc cgagatgccg tccatggacg cgctggcacg ccggctgggc
      361 ggcgaccgct tccaggtggt ggcggtgtcg cttgaccggg gcggcgcccc ggtggtggcg
      421 cgctggttcg agcgcaacga catcaaggcg ctgggcatct atctcggcag ttccgccgac
      481 taccagggcg cgctgctgcc gacgtcgtat ctgatcgaca cccagggccg ggtggcgtgg
      541 cagggctcgg gcgccaagga ttgggactca cccgaggcgg tcgccatggt cgaggggttg
      601 atggcggaat aggacggccc ccacctcggc tgaaagatcc ttcgcctgcg gctcaggatg
      661 acaaatcctc tgtcatgctg agcgtagcga agcatctttc aggcacggac ggccgccgcc
      721 ttgacgaaat cccacgaaaa aaggcgccgc aaggcgcctt ttcccggttc gtcgaggagc
      781 ttttgcgaga cggctcagcc gtccactcgc acgatcacct cgacacggct gatgttgaag
      841 ccctcggggg cctcggggat gcgggtcagg ccgaccatct cggccgggat gtcgcacagc
      901 ttgcccgatt tctcgaagaa gaagtggtgg tggtcggtgg tgttggtgtc gaaatacgac
      961 cgccccgcgt cgaccacgat ctcgcgcagc aggcctgcgt cggtgaactg gtgcagcgtg
     1021 ttgtagacag tcgccagcga cacccggatg ttgttggtca acgcctcgga atgcagctgt
     1081 tccgccgaca tgtggcggtc gcccgcgtcg aacagcagac gggccagcgc caggcgctga
     1141 cgggtgggac gcaagccggc ggcacgcagg cggtcgaggg cttggctgta ggggcgtatg
     1201 gtgaccatgg tcatgatatg gaccgccctg tggcagattt aaagacgtct ggatcgaagc
     1261 tatcacacag accgttgaaa aataaagcct gtcccgtgca cgaccgtgac tttggtcaag
     1321 tcggccgcaa cgtatgggcg tgcacgtggt gggcgccgtg gcgctgcatg atctcgccgg
     1381 cgcggctttc gctctggtcg tcgtggcagc gcacccacac caggatgccg cccttctcga
     1441 tctggtcgtg gaagcgctcg gcggtgcgct tgtcgtagat gcgccccagc ccgacaccca
     1501 ggccagcccc ggccccggcc ccgaccagcg ccgcgccgac cgccaaggcg gcggcgccg
//
LOCUS       DATIKR010000420         3203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_187318, whole genome shotgun sequence.
ACCESSION   DATIKR010000420 DATIKR010000000
VERSION     DATIKR010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187318"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1276)
                     /locus_tag="VLL76_06600"
     CDS             complement(<1..1276)
                     /locus_tag="VLL76_06600"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSV29207.1"
                     /translation="MIRSIQDCAADVAQTLAACMKQNDGFHVVLTALRQAGARMGAVC
                     MPDNAVKDALVVRLSFGMEGASNKVLRRAAPRRQTAAERAFTTGEVVEADYSLSGVAP
                     SDLEEMLSVDYALVVPIPGPGHAAGILLLVGREERDPALRELAERLARVLADHLEHLA
                     PQPVTMIQPPAADTGSFAHALTECAQVSDIDALSEKVLDHCLRFTRSRFGFVGYVDPE
                     TGFLLTPTMTRDIFHQCQVAGKTVVFEKPGGLGGVVFDQNVPLIANDPSGHPSSVGTP
                     PGHLPIRRFMGVPCMHHGAKRGMIGLANKEGDYNDNDVELVSVFAAVYAAAVARWYAE
                     RELADERRRFAALVDAAPCGFISADSEGVIHTINAPLLARLGIARDQADQGLNLADLV
                     APASLGMFEMQLASAKDGPTHAIGIDYLAADGQ"
     gene            complement(1417..2619)
                     /locus_tag="VLL76_06605"
     CDS             complement(1417..2619)
                     /locus_tag="VLL76_06605"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSV29208.1"
                     /translation="MPFIADRLSAIKPSPTIAVTQKAAELKAAGRDVIGLGAGEPDFD
                     TPDNIKAAAKAAIDKGQTKYVAPAGTLELRQAICAKFKRENGLDYTPDQVTVGVGGKG
                     VIFNAFMATINPGDEVIVPAPYWVSYPDIALMFGGKPVFVPCPEETGFKLTAADLEKA
                     ITPNTKWLVLNSPSNPTGAAYSWDEMKALTDVLVKHPHVWIMSDDMYEHLVYDGFKFC
                     TPAQVEPKLYERTLTMNGVSKAYAMTGWRVGYAAGPLPLIKAINMIQSQSVTHTASIS
                     QAAAVEALNGTQDFIPKNAEIFKARRDLVVRMLNECKGLTCKTPEGAFYVYPSCAGVI
                     GKKTPDGKVINSDTDFVGALLEAEGVAVVQGAAFGLEPYFRISYATSTEALTKACERI
                     KRFCDSLV"
     gene            2827..>3203
                     /locus_tag="VLL76_06610"
     CDS             2827..>3203
                     /locus_tag="VLL76_06610"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HSV29209.1"
                     /translation="MAKKHSDETDAVVTAAFALAADKGWRRASLVEIADRAGIRLAEL
                     VDRFPTKTHILDSYAKTIDRRMMEGKLDADDPMRDRLFDVVMRRFEAMAPDRRALAVI
                     LRETGDDPWTLACGARRFWKSMAL"
BASE COUNT          515 a         1033 c         1118 g          537 t
ORIGIN      
        1 tctgcccatc cgccgccagg tagtcgatgc cgatggcgtg agtggggccg tccttggccg
       61 aagccagttg catctcgaac atgcccaacg acgccggcgc caccaggtcg gccaggttca
      121 gtccctggtc ggcctgatcg cgcgcgatgc ccaggcgggc cagcagcggc gcgttgatgg
      181 tgtggatgac gccttcgctg tcggctgaaa tgaagccgca aggcgctgca tcaaccaggg
      241 cggcgaagcg gcggcgctcg tcggccagtt cgcgttcggc gtaccagcgg gcgacggcgg
      301 cggcgtagac ggcggcgaac accgacacca gctcgacgtc gttgtcgttg tagtcgcctt
      361 ccttgttggc cagcccgatc atgccgcgct tggcaccgtg atgcatgcag ggcacgccca
      421 tgaagcggcg gatgggcaga tggccgggcg gggtgccaac cgacgacggg tggccgctgg
      481 ggtcgttggc gatcagtggc acgttctggt cgaacaccac gcctcccagg ccgccgggct
      541 tctcgaacac caccgtctta ccggccacct ggcattggtg gaagatgtcg cgggtcatgg
      601 tgggggtcag caggaagccg gtctcggggt cgacgtagcc gacgaagccg aagcgtgagc
      661 gggtgaagcg caggcaatgg tccagcacct tctcggacag cgcgtcgatg tccgacacct
      721 gggcgcattc ggtcagggcg tgggcgaacg agccggtgtc ggccgctggc ggttggatca
      781 tcgtcaccgg ctgcggcgcc aggtgctcca ggtggtcggc cagcacgcgg gccagacgct
      841 cggccagttc gcgcagcgcc gggtcgcgct cctcgcgccc gaccagcagc aggatgccgg
      901 cggcatggcc gggaccgggg attgggacca ccagggcgta atcgacgctc agcatctctt
      961 ccaggtcgga cggcgccacg ccgctgaggg agtaatcggc ctcgaccacc tcgccggtgg
     1021 tgaaggcgcg ttcggcggcg gtctggcggc ggggcgcggc gcggcgcagc accttgttgc
     1081 tggcgccctc catgccgaag gacagccgca ccaccagggc gtccttgacc gcgttgtcgg
     1141 gcatgcacac cgcccccatg cgggcgccgg cctggcgcag cgcggtcagc accacgtgaa
     1201 agccgtcgtt ctgcttcatg caggcggcca acgtctgggc gacgtcggcg gcgcagtcct
     1261 ggatcgaccg gatcatgctg gcgtgcctcc cccttcagcg agtgtcgcca taggcgcgga
     1321 ggaacgcaag accggtttgc taagaaattg gtatgtgcaa tgcacaaatg aaaaggacgc
     1381 cccgaaggac gtcctttccc gtaaacgtgg atgcgctcag accaggctgt cgcagaagcg
     1441 cttgatgcgc tcgcacgcct tggtcagtgc ctcggtcgag gtggcgtagg agatgcggaa
     1501 atagggctcg aggccgaagg ccgcaccctg caccaccgcc acgccctcgg cctccagcag
     1561 cgcgccgacg aagtcggtgt cgctgttgat gaccttgccg tcgggggtct tcttgccgat
     1621 cacgccggcg caggacggat agacgtagaa ggcgccttcc ggcgtcttgc aggtcaggcc
     1681 cttgcactcg ttcagcatgc gcacgaccag atcgcggcga gccttgaaga tctcggcgtt
     1741 cttcggaatg aagtcctggg tgccgttcag cgcctcgacg gcggcggcct ggctgatcga
     1801 ggcggtgtgg gtcaccgact gcgactggat catgttgatg gccttgatca gcggcagcgg
     1861 gccggcggca tagccgacgc gccagccggt catcgcgtac gccttcgaca cgccgttcat
     1921 ggtcagcgtg cgctcgtaca gcttgggctc gacctgggcc ggggtgcaga acttgaagcc
     1981 gtcatagacc agatgctcgt acatgtcgtc cgacatgatc cagacatgcg gatgcttcac
     2041 cagcacgtcg gtcagcgcct tcatctcgtc ccacgaatag gcggcgccgg tggggttgga
     2101 cggcgagttc agcaccagcc acttggtgtt cggcgtgatg gccttctcca ggtcggcggc
     2161 ggtcagcttg aagccggtct cttccgggca gggcacgaac accggcttgc cgccgaacat
     2221 cagggcgatg tcggggtacg acacccaata gggcgccggc acgatgactt cgtcgccggg
     2281 attgatggtg gccatgaagg cgttgaagat cacgcccttg ccgccgacgc cgacggtgac
     2341 ctggtcgggg gtgtagtcca gtccgttctc acgcttgaac ttggcgcaga tcgcctggcg
     2401 cagctcgagc gtgccggccg gcgccacgta cttggtctgg cccttgtcga tggcggcctt
     2461 ggcggcggcc ttgatgttgt cgggcgtgtc gaagtccggc tcgccggccc cgaggccgat
     2521 gacgtcgcgg ccagcggcct tgagctcggc agccttctgg gtgaccgcga tggtcggcga
     2581 cggcttgatc gccgaaagcc tgtcagcgat gaacggcatg gaaatccccg tggaattgaa
     2641 tggtcagcaa gtgccggaag gtacgcgcgc acgcccctat acgcaagggg gatggtgccg
     2701 gcgaaaggct gggatggcgc gaaacatgcc gcgtcgctaa tattgtgggg acggcccacc
     2761 ccccgttgca ccctggcgcg tgcttcccac atcaaaggaa gccgccccac cccaggatgc
     2821 ccgatcatgg ccaagaagca ttccgacgaa accgatgccg tcgtcaccgc cgccttcgcc
     2881 ctggccgccg acaagggctg gcggcgcgcg tcgctggttg agatcgccga ccgcgccggc
     2941 atccggctgg ccgagttggt cgatcgcttc ccgaccaaga cccacatcct ggattcctat
     3001 gccaagacca tcgaccgccg catgatggag ggcaagctgg atgccgacga ccccatgcgc
     3061 gaccggctgt tcgacgtggt gatgcgccgc ttcgaggcca tggcccccga ccgccgggcg
     3121 ctggcggtta ttctgcgcga gaccggcgac gacccctgga ccctggcctg cggcgccagg
     3181 cggttctgga agtccatggc gct
//
LOCUS       DATIKR010000421         3156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_67111, whole genome shotgun sequence.
ACCESSION   DATIKR010000421 DATIKR010000000
VERSION     DATIKR010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67111"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VLL76_06615"
     CDS             <1..205
                     /locus_tag="VLL76_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HSV29210.1"
                     /translation="VKVAAEGGMEFLAPPLSLCTDNAAMIAWAGIERFQVQGHGDPLD
                     FAPRPRWPLDPDAPKARGAGVKA"
     gene            202..465
                     /locus_tag="VLL76_06620"
     CDS             202..465
                     /locus_tag="VLL76_06620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29211.1"
                     /translation="MMRYPWLLADLPALPDDWGQALDEALADIARLHLPPKFRLTRIH
                     EHNGALRIDWINAGPADDAIKLIALRLASRTDSWSIDPTEVSF"
     gene            complement(455..1495)
                     /gene="queA"
                     /locus_tag="VLL76_06625"
     CDS             complement(455..1495)
                     /gene="queA"
                     /locus_tag="VLL76_06625"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HSV29212.1"
                     /translation="MKVDDFDFDLPRELIADRPVSPRDAARMLHVHGDALDDLGVRAL
                     PALVRPGDVMVFNDTRVIPARLFGRRGEAGIEVTLHERTGLDTWKVFARPAKKCRLGD
                     AIAFGPGFSAEVAERGEAGEVTLRFSQSGDALMLALEEHGRMPLPPYIRKGEADERDR
                     ADYQTVFAREKGAVAAPTAGLHFTPELLAALDAAGVKRTTVTLHVGAGTFLPVKVDDT
                     RDHKMHSERGIVTDETADLVNAAKAAGGRVIAVGTTSLRLLESAASADGRLALFDGAT
                     DIFITPGYRFKLVDVLMTNFHLPRSTLFMLVSAFAGLERMRRAYEHAKAGGYRFYSYG
                     DSCLLELENPRS"
     gene            1576..2505
                     /gene="pip"
                     /locus_tag="VLL76_06630"
     CDS             1576..2505
                     /gene="pip"
                     /locus_tag="VLL76_06630"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HSV29213.1"
                     /translation="MDLFPPIEPHRSGMLEVGDGHSLYWEVSGNPQGVPVVFLHGGPG
                     AATAPPYRRFFDPAFWRIVLFDQRGCGRSSPAASIEANTTGHVIADIEMLRESLGIER
                     WLVFGGSWGSTLALAYGQAHPERVLGFVLRGVFLFRAAEVEWFLTGMAHFFPEAWRRF
                     ADHAGHARDLLSTYYGLLTDPDPAVHLPAARAWCGYEEACARLLPRTDMSEMDGPASL
                     AMARIECHYMMHKGFMAENQLLNRMDRIAHLPATVVQGRYDVVCPPVSADDLVRRWPR
                     ARLVIIPDAGHSSMEPGIRSGLVGAVEGMKALV"
     gene            complement(2601..2870)
                     /locus_tag="VLL76_06635"
     CDS             complement(2601..2870)
                     /locus_tag="VLL76_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HSV29214.1"
                     /translation="MSVRQTIESKLTEGLQPARLDVVDESHRHAGHAGHRPGGESHFR
                     IEIVSDAFAGKSRIERHRMVNALLADELAGPVHAMALVTKAPGEA"
BASE COUNT          462 a         1092 c         1090 g          512 t
ORIGIN      
        1 ggtgaaggtg gcggccgagg gcggcatgga attcctggcg ccgccgctgt cgttgtgcac
       61 cgacaacgcc gccatgatcg cctgggccgg catcgagcgc ttccaggtcc agggtcacgg
      121 cgacccgctg gatttcgcgc cgcgcccgcg ctggccgctg gaccccgacg cgcccaaggc
      181 gcgcggcgcc ggggtcaagg catgatgcgc tatccctggc tgctggccga tctgccggcg
      241 ctgcccgacg attgggggca ggcgctggac gaagccctgg ccgacatcgc ccggctgcac
      301 ctgccgccca agttccgcct gacccgcatc cacgaacaca acggcgcgct gcggatcgac
      361 tggatcaacg ccggccccgc cgacgatgcc atcaagctga tcgcactgcg cctggccagc
      421 cgcaccgatt cctggagcat cgaccccacc gaggtcagct tctagggttt tccagttcca
      481 gcaggcagga atcgccgtag gaatagaagc gatagccgcc cgccttggcg tgctcgtagg
      541 cccggcgcat gcgctccagc ccggcgaagg ccgagaccag catgaacagg gtcgagcgcg
      601 gcaggtggaa attggtcatc agcacgtcca ccagtttgaa gcggtagccc ggcgtgatga
      661 agatgtcggt ggcgccgtcg aacagggcca gccggccgtc ggccgaggcg gcgctttcca
      721 gcaggcgcag gctggtggtg ccgaccgcga tcacccgccc gcccgcggcc ttggcggcgt
      781 tgaccaggtc ggcggtctcg tcggtgacga tgccgcgctc ggaatgcatc ttgtggtcgc
      841 gggtgtcgtc gaccttgacc ggcaggaagg tgccggcgcc cacgtgcagg gtgacggtgg
      901 tccgcttgac cccggcggcg tccaacgccg ccagcagctc gggcgtgaag tgcaggccgg
      961 cggtgggggc ggcgacggcg cccttttcgc gggcgaacac cgtctggtaa tcggcgcggt
     1021 cgcgttcgtc cgcctcgccc ttgcggatat agggcggcag cggcatgcga ccgtgttcct
     1081 ccaacgccag catcagggcg tcgccggatt ggctgaagcg cagggtgacc tcgccggcct
     1141 cgccacgctc ggcgacctcg gcggaaaagc cggggccgaa ggcgatggcg tcacccaggc
     1201 ggcatttctt ggcgggacgg gcgaaaacct tccaggtgtc caggccggtg cgctcgtgca
     1261 gcgtcacctc gatgccggcc tcgccgcgcc ggccgaacag gcgggcggga atgacgcggg
     1321 tgtcgttgaa caccatgacg tcgcccggcc gcaccaaggc gggcagggcg cgcaccccca
     1381 gatcgtcgag cgcgtcgccg tggacgtgga gcatgcgcgc ggcatcgcgg ggcgacaccg
     1441 ggcggtcggc gatcaattcg cgcggcaggt cgaaatcgaa atcgtccact ttcatgggcg
     1501 ggggtgtagg gtgccagggc gcgggcgtca atgctattat gcccacccca tccccggccc
     1561 ggacaggcat cgcccatgga tttgttcccc ccgatcgagc cgcaccgttc cggcatgctg
     1621 gaagtcggcg acggtcattc cctgtactgg gaggtctcgg gcaatcccca gggcgtgccg
     1681 gtggtgttcc tgcatggcgg ccccggcgcc gcgacggcgc cgccctatcg ccgcttcttc
     1741 gaccccgcct tctggcgcat cgtgctgttt gaccagcgcg gctgcggccg gtcctcgccc
     1801 gccgcctcga tcgaggccaa caccaccggc cacgtgatcg ccgacatcga gatgctgcgc
     1861 gaaagcctgg gcatcgagcg ctggctggtg ttcggcggct cgtggggcag cacgctggcg
     1921 ctggcctatg gccaggccca tcccgagcgg gtgctgggct tcgtgctgcg cggcgtgttc
     1981 ctgttccgcg ccgccgaggt cgagtggttc ctgaccggca tggcccattt cttccccgag
     2041 gcatggcggc gcttcgccga ccatgccggc catgcccgcg acctgctgtc cacctattac
     2101 ggcctgctga ccgaccccga cccggccgtg cacctgccgg cggcccgggc gtggtgcggc
     2161 tacgaggagg catgcgcccg cctgctgccg cgcaccgaca tgtccgagat ggacggcccc
     2221 gccagcttgg ccatggcccg catcgaatgc cactacatga tgcacaaggg cttcatggcc
     2281 gagaaccagt tgctcaaccg gatggaccgc atcgcccacc tgccggcgac cgtcgtgcag
     2341 ggccgctacg acgtggtgtg cccaccggta tcagccgacg atttggtccg gcgctggccg
     2401 cgcgcccgcc tggtcatcat ccccgacgcc ggccattcgt ccatggagcc gggcatccgc
     2461 agcggcttgg tcggcgcggt cgagggcatg aaggcgttgg tttaggcctc aggcacgggc
     2521 ggcggccatt tcgggtgaaa gatcaagttc tgtcatgctg agcgtagcga agcatctttc
     2581 acgcaccgac gccagccacc tcaagcctcg cccggcgcct tggtcaccag cgccatggcg
     2641 tggaccggcc ccgccagttc gtcggccagc agggcgttca ccatgcggtg gcgttcgatc
     2701 cgggacttgc cggcgaaggc gtccgacacg atctcgatgc ggaaatggct ttcgccgccg
     2761 gggcggtggc cggcatggcc ggcatggcgg tgcgattcgt cgacgacgtc gagccgggcc
     2821 ggctgcaatc cctcggtcaa cttgctctcg atcgtctgac gcaccgacat gtttcacctt
     2881 tcacgtttgg atggctccac ggaagtggta tgcgtcgagc ctgtcgtcaa ggccttcgga
     2941 aagcggacct gccgccttgc caccgggccg gcgagccatc attatgagct atcatgaagg
     3001 ccaccagtac gaagagatcc tggcgcgtcg cctacgacga gccgcaggca ggcaaggtca
     3061 cccgtccgtg cgaccatccc ggttgcgcct gtgagggcgg gtttcgcgcg ccgcgtgccc
     3121 gcgaccgcct caacgattac tactggttct gcctcg
//
LOCUS       DATIKR010000422         1883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_212186, whole genome shotgun sequence.
ACCESSION   DATIKR010000422 DATIKR010000000
VERSION     DATIKR010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212186"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1396
                     /locus_tag="VLL76_06640"
     CDS             <1..1396
                     /locus_tag="VLL76_06640"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HSV29215.1"
                     /translation="SDDWGLAKAWAEIRRIEEPGGDTLRVDLPLPGGRPRNADMTSWH
                     DLTAHPWAGLPVTVTPVAEDALGQGGRGPAITLTLPERSFTHPVARALVEQRRLLTED
                     RGNALGAVELLDGVTSEPRLIGDDLKVFLALRTARAVLSYDGFDLADAQDLLWNAALR
                     LEEGDLAEAERSLEDARRRLEQAVDGNASNAEMQQALAEFQAAMMRYLQAMAEQMARN
                     GQQPMAPSPDARVIGAEELAQMMQSMQDMAQTGARDALKQMLQDLNQMLSNLQSAPPP
                     PQSAAMGKAMRDLAELTKRQQQMLDHSFQQSQQGGQQPGNGAAEAQEALRKSLGEIAR
                     QMEQGLGEAPSGLGEAGEAMGQAAGTLRRDQWEEAGEHQAQAVQQLQQAARQAAEQMG
                     MAGQGGLGMVPRDPMGRPMTGSGFGDDGTTRIPGQSDIQRAREILDELRRRAGEWQRP
                     EQERDYLNRLLKQF"
     gene            1678..>1883
                     /locus_tag="VLL76_06645"
     CDS             1678..>1883
                     /locus_tag="VLL76_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HSV29216.1"
                     /translation="MDKLTQGIRPYLALSLLCLILYLPGLAAIPPLDRDEARFAQATR
                     QMVESGDYVRIQFQDEMRAKKPAGA"
BASE COUNT          323 a          664 c          657 g          239 t
ORIGIN      
        1 ctcggacgat tgggggctgg ccaaggcctg ggccgagatc cgccgcatcg aggagccggg
       61 cggcgacacc ctgcgcgtcg acctgccgct gccgggcggg cggccgcgca atgccgacat
      121 gacaagctgg cacgatctga ccgcccatcc ctgggccggc ctgccggtga cggtgacgcc
      181 ggtggccgag gacgccttgg gccagggcgg acgcggcccg gccatcaccc tgaccctgcc
      241 cgagcgcagc ttcacccatc ccgtcgcccg cgccctggtc gagcagcgcc gcctgctgac
      301 cgaggaccgc ggcaacgccc tgggcgccgt ggagttgttg gacggcgtca cctcggagcc
      361 gcgcctaatc ggcgacgacc tcaaggtctt cctggccctg cgcacggcgc gggcggtgct
      421 gtcctatgac ggcttcgacc tcgccgatgc ccaggacctg ttgtggaacg ccgccttgcg
      481 actggaggaa ggcgacctgg ccgaggccga gcgcagcctg gaggacgccc gccggcggct
      541 ggagcaggcg gtggacggca acgcctcgaa tgccgagatg cagcaggctc tggccgagtt
      601 ccaggcggcc atgatgcgct atctgcaggc catggccgag cagatggccc gcaacggcca
      661 gcagcccatg gccccgtcgc ccgatgcccg cgtcatcggc gccgaggaat tggcgcagat
      721 gatgcaatcc atgcaggaca tggcccagac cggcgcccgc gacgccctga agcagatgct
      781 gcaggacctc aaccagatgc tgtccaacct gcaatccgca ccgccgccgc cgcaatcggc
      841 cgcaatgggc aaggccatgc gggatctggc cgagttgacc aagcggcagc aacagatgct
      901 ggaccacagc ttccagcaat cgcagcaggg cggacagcag cccggcaacg gcgccgccga
      961 agcccaggag gccctgcgca agtcgctggg cgagatcgcc cggcagatgg agcagggcct
     1021 cggcgaggcg ccctcgggcc tgggcgaggc cggcgaggcc atgggccagg ccgcaggcac
     1081 cctgcgccgc gaccagtggg aggaagccgg cgaacatcag gcccaagcgg tgcagcaatt
     1141 gcagcaggcc gcccgccagg cggcggagca gatgggcatg gcgggccagg gcgggctggg
     1201 catggtgccg cgcgacccga tgggccgccc catgaccggg tcgggcttcg gcgacgacgg
     1261 caccacccgc attcccggcc agtccgacat ccagcgcgcc cgcgagatcc tcgacgaatt
     1321 gcggcgccgc gccggcgaat ggcagcggcc cgagcaggag cgcgactacc tcaaccgcct
     1381 gctgaagcag ttctaagacc ccccatgatc gtcatggcac gccgagtttt ttcgtcatcc
     1441 ccgcgaaggc ggggatccat ggaggccgca aaacatgtcg gcggaacaat gggttgatgg
     1501 cgaagccgga cggacccatg gacccccgcc ttcgcggggg tgacgagtgt ggggtcgccc
     1561 gagggtgacg gtaaggagaa tgcggttccg ccccagcggg cagcctctaa cctacttgat
     1621 cacatccctc cggcatggtc taaaacgcta cgcctcagcc acacggatcg cctggacttg
     1681 gacaagctca cccagggcat tcgcccctat ctcgcgcttt cgctgttgtg cctgatcctg
     1741 tacctgcccg gcctggccgc gatcccgccg ctggaccgcg acgaggcgcg cttcgcccag
     1801 gcgacgcggc agatggtgga aagcggcgac tacgtccgca tccagttcca ggacgagatg
     1861 cgcgccaaga agccggccgg ggc
//
LOCUS       DATIKR010000423         2419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_43080, whole genome shotgun sequence.
ACCESSION   DATIKR010000423 DATIKR010000000
VERSION     DATIKR010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43080"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VLL76_06650"
     CDS             <1..429
                     /locus_tag="VLL76_06650"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HSV29217.1"
                     /translation="SEQLDAIVQATEGATNTIMESVEGIDNLVNDARAATQDPALNQI
                     FDQVTDKVNAVFEACSFQDITGQRVTKVVNSLKFVEERINTIILTWGKDELTKVVVEI
                     KEDKDPDKKLLHGPQLPGQGVSQEEVDKMLAQTEIDKLFG"
     gene            591..890
                     /gene="rpmB"
                     /locus_tag="VLL76_06655"
     CDS             591..890
                     /gene="rpmB"
                     /locus_tag="VLL76_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HSV29218.1"
                     /translation="MARRCAITGKGVLTGNNVSHANNKTRRRFLPNLQETSVLSDALG
                     QMVRLKVSTRGLKTIEHNGGLDAFLLGTSDAKLTDEARRIKRRVAKAAASKAVEA"
     gene            complement(1108..>2419)
                     /locus_tag="VLL76_06660"
     CDS             complement(1108..>2419)
                     /locus_tag="VLL76_06660"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HSV29219.1"
                     /translation="VQRLELQSPKALARKGRDGYGWRVEARRIAIERAAMTTEGDLSI
                     GDLRLAAPVARLQRTAKGFAGFASTEPEAADTPLPRVTLARLRIGGGRVEFEDRTPSE
                     AVRLTVDGIDLVARELDTGTPEHDSPFTLKARAGASVLAASGSLRPFAPSFSGKMKGD
                     VKSFELPPLSPYAADSLGVHLHTGQFDGDLSLAVEHGALDGRMDMVLSNLFVAQPDPN
                     APIAKQADMPVETVLDLLRDSEDRIRLTIPVRGDLSKPDFDVSDAVSQAVGGALKSTV
                     VTTLKVAFPVAALIGYVIDESSASRLSLEPLAFAAGDAALADSHPARLATVADLLRQR
                     PGLKLTLCGAATMAADWPAVLERRRQEELGLLAKLQKLVGVEAKPEDIAPDRDALTAL
                     AEGRAQAVKAWLVKNGGIDAGRLFTCRPKVEPNGTGGPRVDLLL"
BASE COUNT          411 a          840 c          795 g          373 t
ORIGIN      
        1 tccgagcagc tcgacgccat cgtccaggcg accgagggcg ccaccaacac catcatggaa
       61 agcgtcgaag gcatcgacaa cctggtcaac gacgcccgcg ccgccaccca ggaccccgcc
      121 ctcaaccaga tcttcgacca ggtcaccgac aaggtgaacg ccgtgttcga ggcctgctcg
      181 ttccaggaca tcaccggtca gcgcgtcacc aaggtggtca attcgctgaa attcgtggaa
      241 gagcgcatca acaccatcat cctgacctgg ggcaaggacg agctgaccaa ggtggtggtc
      301 gagatcaagg aggacaagga tcccgacaag aagctgctgc acggcccgca gcttcccggc
      361 cagggcgtgt cgcaggaaga ggtcgacaag atgctggccc agaccgagat cgacaagctg
      421 ttcggctgat tcgccgtctg agcgcgccgg accaagccct tgaatcgatt cagcccttga
      481 cgaggccgcc gcacttcctt aaaaacgcgg cttccctggg tcttgaaccc ataccagttt
      541 cgcgccccgg ccccgccgga cgcctgtaga agacgagaga ggatttcatt atggcccgtc
      601 gctgcgccat caccggcaag ggtgtgctga ccggtaacaa cgtcagccac gccaacaaca
      661 agacccgtcg tcgcttcctg cccaacctgc aggagacctc ggttctgtcg gacgcgctgg
      721 gccagatggt ccgcctgaag gtttcgaccc gtggcctgaa gaccatcgag cacaacggcg
      781 gcctcgacgc cttcctgctc ggcacctccg atgccaagct gaccgacgaa gcccgccgca
      841 tcaagcgccg cgtcgccaag gccgccgcgt cgaaggccgt cgaggcctaa tcgactcagc
      901 ctccggttcc gaaagggtcc gcgcgcgagc gcgggccctt ttcgtgtttc ggcgcagtct
      961 tgggcatggc cgcctgcccc ctcctcgtca tcgccgggct tgacccggca gccgcgcgtt
     1021 tctgcttgga actgttcggc caggggagat cgctgacagg gagacatcgg cttacaatgc
     1081 gcctttgatg aatttttccg cagcatccta cagcagcaga tcgacgcgcg ggccgccggt
     1141 gccgttgggc tcgaccttgg gccggcaggt gaacagccgg ccggcgtcga tgccgccgtt
     1201 cttgaccagc catgccttga ccgcctgggc gcggccttcc gccaacgccg tcagggcgtc
     1261 gcggtcgggt gcgatgtcct cgggtttggc ctcgaccccc accagcttct gtagcttcgc
     1321 aagcagcccg agttcctcct ggcggcggcg ctccagcacg gccggccagt cggcggccat
     1381 cgtggcggcg ccgcacagcg tcagcttgag accggggcgc tggcgcagca ggtcggcgac
     1441 ggtcgccagc cgggccgggt gggaatcggc caaggcggca tcgcctgccg cgaaggccag
     1501 cggttccaac gacagccgcg aggccgagct ttcgtcgatg acatagccga tcagggcggc
     1561 caccggaaac gccaccttca gcgtcgtcac cacggtggat ttcagcgccc cgcccaccgc
     1621 ctgcgacacc gcgtcgctga cgtcgaaatc gggcttcgac aggtcgccgc gcaccgggat
     1681 ggtcagccgg atgcggtcct cggaatcgcg cagcaggtcc agcacggtct cgaccggcat
     1741 gtcggcctgc ttggcgatag gggcgttggg gtcgggctgg gcgacgaaca ggttggacag
     1801 caccatgtcc atgcggccgt ccagggcgcc gtgctcgacc gccagcgaca ggtcgccgtc
     1861 gaactggccg gtatgcaggt gcacccccag gctgtcggcg gcatagggcg acagcggcgg
     1921 cagttcgaag gatttgacgt cgcccttcat cttgccgctg aacgacggcg cgaacggccg
     1981 cagcgagccg gacgcggcca gcaccgaggc gccggcacgg gccttcaatg tgaacgggct
     2041 gtcgtgttcg ggtgtgccgg tatccagctc gcgcgccacc agatcgatgc cgtccaccgt
     2101 caggcggacc gcctcggacg gggtgcggtc ctcgaactcc acccggccgc cgccgatcct
     2161 gagccgggcc agggtgacgc ggggcagcgg cgtgtcggcc gcctccggtt cggtggaagc
     2221 aaagccggca aagcccttgg cggtgcgttg cagccgcgcc accggggcgg ccagccgcaa
     2281 atcaccgatg gagagatcgc cctcggtcgt catggcggcg cgctcgattg cgatgcgccg
     2341 ggcctcgacc cgccagccat aaccgtcgcg gcccttgcgc gccagcgcct tgggcgattg
     2401 cagttcgagg cgctgcacc
//
LOCUS       DATIKR010000424         2784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_139747, whole genome shotgun sequence.
ACCESSION   DATIKR010000424 DATIKR010000000
VERSION     DATIKR010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139747"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..931
                     /locus_tag="VLL76_06665"
     CDS             170..931
                     /locus_tag="VLL76_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29220.1"
                     /translation="MQLNLIEAGQGRPLVIMHGLMGSSRNWGAIVRQLGERRRVLALD
                     LPNHGGSPWTEVMDYPFMARSVAEFIEGLGQPAAVVGHSMGGKAAMALALTRPDLVEK
                     LVVVDIAPVGYSHTFAPYIKAMRAVPLSTAQRRADVEEHLKAAIPDPRVRAFLMQNLD
                     GEPGAYRWRPNLAVLGAAMTDILDFPAFAGARYDGPALFLAGGDSDYVLPEHEPRIAE
                     LFPHARVERVGGAGHWLHADRPDVFVKLVGEFVGA"
     gene            complement(928..1860)
                     /locus_tag="VLL76_06670"
     CDS             complement(928..1860)
                     /locus_tag="VLL76_06670"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HSV29221.1"
                     /translation="MWSDLLLTAVLPGVVMVAYFHARNEYCTSRGLIQIAYVLGVLSP
                     LLTLLLSGLLHHPSDPADGIYWAAMNVSLFGAAIPEELGKGAMVMAFVWLFRGSRERP
                     HDMVVLGAAVGAGFAANENVLYLLRANTLWVETGILRALMSVPGHVCWGAIMGALLAQ
                     REVDDSPGWTAAAFGLPIVLHALYDFPLFVGYFARVTEVDDAEAIAAMLDNAALMVVL
                     VECAAAILVSAAVLRGERRNGMAPATPSDLRQDLVGGAAWIALALVVGVGGVINALTL
                     VENGETFLLTLLPMLYAAAGLHLGYARLTAPVEA"
     gene            complement(2048..>2784)
                     /locus_tag="VLL76_06675"
     CDS             complement(2048..>2784)
                     /locus_tag="VLL76_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV29222.1"
                     /translation="TGLADPAPVIHTLMTDPLLASRYKLDGIVTTVDAVNGSRTLDNH
                     PEAVKQAAVADRILLTKADLAGDSAIINLSERLNRLNPAAPKLKVWNGKVDPDFILDA
                     GLFNSRDKIPDVQKWLNDEAYGAGHDHHHHHHDRNRHDDRIQAFVFTHDEPVSWPALA
                     FALELLVSSRGENLLRIKGIVHAREHEKPLAIHGVQHVFHPPAALPDWPDADRRTRIV
                     FITRDLGRQAIEDVLRGVLGATDTNG"
BASE COUNT          473 a          900 c          982 g          429 t
ORIGIN      
        1 ttcccttgcc gcccatgatc aatccctggg tcgatccgat gtacgcaacc atagcgatgg
       61 cggggcgggc gagtcaaagt ccttcgcgat catggccgaa cgccgtgccc ggctgttgac
      121 gaagggccgg cggggcgtca ccatcccgcc ccttcacggg agaggtcgga tgcaactcaa
      181 cctcatcgaa gccggccagg gccggccgct ggtcatcatg cacgggctga tgggctcgtc
      241 gcgcaactgg ggcgccatcg tccgccaact gggcgaacgc cgccgcgtcc tggcgctgga
      301 cctgcccaac cacggcggct cgccgtggac cgaagtgatg gactatccct tcatggcccg
      361 cagcgtcgcc gagttcatcg agggactggg ccagccggcg gcggtggtcg gccattccat
      421 gggcggcaag gcggccatgg ctctggcgct gacccggccg gacctggtcg agaaattggt
      481 ggtggtggac atcgccccgg tcggctacag ccacaccttc gctccctaca tcaaggccat
      541 gcgggcggtg cccctgagca ccgcgcaacg ccgcgccgac gtggaagagc atttgaaggc
      601 ggcgatcccc gacccgcgcg tgcgcgcctt cctgatgcag aacctggacg gcgagccggg
      661 cgcctatcgc tggcggccca atctggcggt gctgggggcg gccatgaccg acatcctcga
      721 cttcccggcc ttcgcggggg cacgctatga cggcccggcg ctgttcctgg cgggcggcga
      781 ttcggattac gtgctgcccg agcacgagcc caggatcgcc gaactgttcc cccacgcacg
      841 ggtcgagcgc gttggcggcg ccggccattg gctgcatgcc gaccggccgg atgtgttcgt
      901 taaactggtc ggcgagttcg tcggggccta ggcctcgacc ggcgcggtca ggcgggcata
      961 gcccaaatgc aggccggcgg cggcatacag catcggcagc agcgtcagca ggaaggtctc
     1021 gccgttctcg accagcgtca gggcgttgat gacgccgccg acgcccacca ccaacgccag
     1081 ggcgatccac gccgccccgc ccaccagatc ctggcgcagg tcggagggcg ttgcgggcgc
     1141 catgccgttg cggcgttcgc cgcgcaacac cgcggccgac accaggatgg cggcggcgca
     1201 ttccacgagc accaccatca gcgcggcatt gtccagcatg gcggcgatcg cctcggcatc
     1261 gtcaacctcg gtgacgcggg cgaaatagcc gacgaacaac gggaagtcgt acaaggcgtg
     1321 cagcacgatg ggcaggccga aggcggcggc cgtccagccg gggctgtcgt ccacctcgcg
     1381 ctgggccagc aacgcgccca tgatggcgcc ccagcagacg tgccccggca ccgacatcag
     1441 cgcccgcagg atgccggtct cgacccacaa cgtgttggcc cgcagcagat agaggacgtt
     1501 ctcgttggcg gcgaaaccgg cacccacggc ggcgcccagc acgaccatgt cgtggggccg
     1561 ctcacggctg ccccggaaca accagacgaa ggccatcacc atggcgccct tgcccaattc
     1621 ctcggggatg gcggcgccga acagcgacac gttcatggcc gcccaataga tgccgtcggc
     1681 cgggtccgag ggatggtgca gcagccccga cagcagcaac gtcaacaacg gtgacagcac
     1741 acccaggaca taggcgatct ggatcagccc gcgcgaggtg caatactcgt tgcgggcatg
     1801 gaaataggcg accatgacga cgcccggcag cacggcggtc agcagcagat cggaccacat
     1861 ggctcccccc tcgcggctcg atcgaggata ggcaaagaaa aaccgtccgc caaggggatc
     1921 cggcggacgg tggggagttt gtcttagaga gggaggctga cctcggggag gtcaacatct
     1981 gaggggtaac ataccccgcc catgcatcga agtcaaatga ttttaatatc ggttctcaac
     2041 aagccgatca gccgttggtg tcggttgcac ctagcacccc ccgcagcacg tcctcgatgg
     2101 cctggcggcc gaggtcgcgg gtgatgaaga cgatgcgggt gcggcggtcg gcatcgggcc
     2161 agtcgggcag ggcggcgggc gggtggaaga cgtgctggac gccatggatg gccagcggct
     2221 tctcgtgctc gcgggcgtgc acgatgccct tgatgcgcag caggttctcg ccacggctgg
     2281 acaccagcag ttccaacgcg aaggccaggg ccggccacga caccggttcg tcgtgggtga
     2341 acacgaaggc ctggatgcgg tcgtcgtggc ggttgcggtc gtgatggtgg tgatgatggt
     2401 cgtggccggc gccataggcc tcgtcgttca gccacttctg cacgtcgggg atcttgtcgc
     2461 ggctgttgaa caggccggca tccaggatga agtcgggatc gaccttgccg ttccaaacct
     2521 tcagcttggg ggcggctgga ttgagccggt tcaggcgttc ggataggttg atgatggcgg
     2581 aatcgccggc caaatcggcc ttggtcagca ggatgcggtc ggcgacggcg gcctgcttga
     2641 ccgcctcggg gtggttgtcg agcgtgcggc tgccgttgac ggcgtcgacc gtggtgacga
     2701 tgccgtccag cttgtagcgg ctggcgagca gcggatcggt catcagggtg tggatgaccg
     2761 gggcggggtc ggccaggccg gtgg
//
LOCUS       DATIKR010000425         4249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_114948, whole genome shotgun sequence.
ACCESSION   DATIKR010000425 DATIKR010000000
VERSION     DATIKR010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4249
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114948"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1031
                     /locus_tag="VLL76_06680"
     CDS             <1..1031
                     /locus_tag="VLL76_06680"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HSV29223.1"
                     /translation="PSMSLRRVLVAFGLLAALAAVAYTAYWFHVAGQLRKGIEGWADH
                     RRSMGWTVEWRSLQVGGFPGGVRADMAAPHLASPAGWRWRGESLAADASPFDITRVAL
                     HSPGRHLLAWGGQEMAVTAGHARADLDFRDGTLDAASVALADVESEGWRAATVSANFD
                     PQPPPPDHDGAGATFAARVQRAALPEIPGLVLEREIAFAEIAGRVMGPLPVGAPVDAL
                     MRWSAEGGTVEIDRLALDWAPMGMEAEGTFAFDPALQPLLTLSARVRGFSPLMDRLNA
                     AGMVDAGASAAAKLLLSMMSKPDAQGRPAVPVPVTLQEGMLFFGPAKVARVPPIQWPG
                     QEEGALAR"
     gene            1086..2285
                     /locus_tag="VLL76_06685"
     CDS             1086..2285
                     /locus_tag="VLL76_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HSV29224.1"
                     /translation="MQAIANEPVSSFHPPRRTLMGPGPSDVHPRVLAAMARPTIGHLD
                     PAFVAMMDQVKGLLQYAFQTTNELTLPVSGPGSAGMEACFVNLVEPGDTVVVCVNGVF
                     GGRMKENVERCGGIAVVVEDAWGSPVDPAKVADALRAHPGAKALAFVHAETSTGVASD
                     AAALCRLAREAGALSIVDTVTSLGGMPVRVDAWGADAVYSGTQKCLSCTPGLSPVTFS
                     PRAVEAVKARKAKGQSWFLDFSLLTAYWGGGAKRAYHHTAPINALYALHEALVMLQEE
                     GLDEAWSRHDHHHRALVAGLEAMGLEMLVAPECRLPMLNAVRVPDGIDEAQVRARLLQ
                     RFGLEIGAGLGGLAGKVWRIGLMGQSCTAGHVTQCLAALDGVLSEMGAPVKTGVAVGA
                     AEKVLFG"
     gene            complement(2290..3144)
                     /locus_tag="VLL76_06690"
     CDS             complement(2290..3144)
                     /locus_tag="VLL76_06690"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV29225.1"
                     /translation="MRLIRLLLVLLVVAMPAAAKDGASRFAGLDGFLVHYKSWGKASD
                     EAVILIHGYGMDQSLWRLQVPALAKTHRVIAMDSPGHGDSARPKDAVFTMDLYARAVE
                     AVAQDAGVKRAVLIGHSMGLPVIHTVLRRGKLAVTKAVFVDGAIVVPPTDPKKAAEQE
                     KWMKDFSAALKTPEYRVALEQFFAGFSPKLPRAWKKEIGAKVRDVDQHMASSTFDHFA
                     DADVWAPARHDIPVLALYAEMSTEGAKDWLAANYPKARMVVWNDVDHFPQLEQPERVN
                     KAILKFLK"
     gene            complement(3149..3997)
                     /locus_tag="VLL76_06695"
     CDS             complement(3149..3997)
                     /locus_tag="VLL76_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV29226.1"
                     /translation="MHNHIMGLDHPVIAVRDLDAAAETFRRLGFALTPKGHHPEWGTA
                     NCCAMFGQDYVELLAAEGSGAEAERVRAFTAKGEGMIGLSLSTQDGAAAVAALRKAGI
                     DVSDPRSLSRKLDDEAGTTFMFSQVLLPSEATPGVAARLVQHITAARERHPEWMAHPN
                     GAFGIASVTAIIDEPGEAITAWDAIFGPHAATPTDNTVTIHTGRGLIFLSSPDDLTQL
                     HPEAELEEAPPPPALVALALQVADTDRAAAVLKKNGVEFSRDTEGTIRIPPSEACGVY
                     LEMVGG"
BASE COUNT          583 a         1444 c         1537 g          685 t
ORIGIN      
        1 atccgtccat gtctcttcgc cgcgtcctcg tcgctttcgg cctgctcgcc gccctcgcgg
       61 cggtggccta cacagcttat tggtttcacg tcgcggggca attgcgcaag gggatcgaag
      121 gctgggccga ccatcggcgg agtatgggct ggaccgtgga atggcggtcg ctgcaggtcg
      181 gcggctttcc cggcggggtg cgggccgaca tggcggcgcc ccatttggcc tcgccggccg
      241 gctggcgttg gcgtggcgaa agcctggcgg ccgatgccag ccccttcgac atcacccgcg
      301 tcgcgctgca ttcgcccggc cgccacctgc tggcctgggg cggccaggag atggcagtga
      361 cggccggcca cgcccgcgcc gacctggatt tccgcgacgg cacgctcgat gccgccagcg
      421 tcgctttggc cgacgtggag tccgagggct ggcgcgcagc caccgtgtcg gcgaatttcg
      481 atccgcagcc gccgccgccc gaccatgacg gcgccggcgc caccttcgcc gcccgggtgc
      541 agcgcgccgc cttgcccgag attccgggtc tggtgctgga acgcgagatc gctttcgccg
      601 agattgccgg tcgcgtcatg gggccgctgc cggtcggggc gccggtggac gcgctgatgc
      661 gctggagtgc cgagggcggc accgtcgaga tcgaccggct ggcgctggat tgggcgccca
      721 tgggcatgga ggccgagggc accttcgcct tcgacccggc gctgcagccg ctgctgacgc
      781 tgtcggcgcg ggtgcgcggc ttttcgccgc tgatggaccg cctcaacgcc gccggcatgg
      841 tggatgccgg cgcctcggcg gcggccaagc tgctgctgtc catgatgtcc aagcccgacg
      901 cccagggccg cccggcggtg ccggtgccgg tgacgctgca ggagggcatg ctgttcttcg
      961 gccccgccaa ggtggcgagg gtgcccccca tccaatggcc agggcaagag gagggcgcgc
     1021 tggcgcggtg acatcccggg ccgccgggtt atactcgccg gcgtgcacag ggaggcaaat
     1081 ccatcatgca ggccatcgcg aacgagccgg tttcgtcctt tcatccgccg cgccggaccc
     1141 tgatgggtcc cggcccgtcc gacgtgcatc cgcgcgtgct ggcggccatg gcgcggccga
     1201 ccatcggcca tctcgacccc gccttcgtcg ccatgatgga ccaggtgaag ggcctgctgc
     1261 agtatgcctt ccagaccacc aacgagctga ccctgccggt gtccggcccc ggctcggccg
     1321 gcatggaggc ttgcttcgtc aacctggtcg agccgggcga cacggtggtg gtgtgcgtca
     1381 acggcgtgtt cggcggccgc atgaaggaga acgtcgagcg ctgcggcggc attgccgtgg
     1441 tggtcgagga cgcctggggc agcccggtcg accccgccaa ggtggctgat gcgctgcgcg
     1501 cccatcccgg cgccaaggcc ctggccttcg tccatgccga gacctccacc ggcgtggcgt
     1561 cggacgccgc cgctttgtgc cggctggcgc gcgaggccgg cgccctgtcc atcgtcgaca
     1621 ccgtgacctc gctgggcggc atgccggtgc gggtggatgc ctggggcgcc gacgcggtct
     1681 attccggaac ccagaaatgc ctgtcctgca cccccggcct gtcgccggtg acattcagcc
     1741 cgcgcgccgt cgaggcggtc aaggcgcgca aggccaaggg ccagtcgtgg ttcctggatt
     1801 tcagcctgct gaccgcctat tggggcggcg gcgccaagcg cgcctatcac cacaccgccc
     1861 ccatcaacgc gctctatgcc ctgcacgaag ccctggtgat gctgcaggag gaagggctgg
     1921 acgaggcgtg gagccgccac gaccaccacc accgcgccct ggtcgccggc ctggaagcca
     1981 tggggctgga gatgctggtg gcgcccgaat gccgcctgcc catgctgaac gccgtccggg
     2041 tgcccgacgg catcgacgag gcgcaggtgc gcgcccgcct gctgcagcgc ttcggcctgg
     2101 agatcggcgc cggcctgggc ggcctggccg gcaaggtgtg gcgcatcggc ctgatgggcc
     2161 aaagctgcac cgccggccac gtcacccaat gcctggcggc actggatggc gtgctgtccg
     2221 agatgggcgc gccggtgaaa acaggcgtgg cggtcggggc ggcggaaaag gtgctgttcg
     2281 ggtaattcgc tacttcagga acttcaagat cgccttgttg acccgctcgg gctgttccag
     2341 ttgtgggaag tggtcgacgt cgttccacac caccatcctg gccttggggt agttggcggc
     2401 cagccagtcc ttggcgccct cggtggacat ttcggcatag agcgccagca ccgggatgtc
     2461 gtggcgggcc ggcgcccaca cgtcggcgtc ggcgaaatgg tcgaaggtgc tggacgccat
     2521 gtgctggtcc acgtcgcgga ccttggcacc gatctccttc ttccacgccc tcggcagctt
     2581 gggcgagaag ccggcgaaga actgctccag cgccacccgg tattccgggg tcttcagcgc
     2641 cgccgagaaa tccttcatcc acttttcctg ctcggccgcc ttcttgggat cggtgggcgg
     2701 cacgacgatg gcgccgtcca cgaacaccgc cttggtcacc gccagcttgc cccggcgcag
     2761 cacggtgtgg atcaccggca ggcccatgga atggccgatc agcacggcgc gcttgacgcc
     2821 ggcatcctgg gccaccgctt cgacggcgcg ggcgtacagg tccatggtga agacggcgtc
     2881 cttgggccgc gccgaatcgc cgtggccggg cgagtccatg gcgatgaccc ggtgggtctt
     2941 ggccagggcg gggacctgca gccgccacag gctctggtcc atgccgtagc cgtggatcag
     3001 gatcaccgcc tcgtccgagg ccttgcccca gctcttgtaa tgcaccagga agccgtcgag
     3061 gccggcgaag cgcgaggcac cgtccttggc ggccgccggc atggcgacga ccagcaggac
     3121 cagtagaagt cggatcaatc tcatcggttc aaccccccac catttccaaa tagacgccgc
     3181 aggcttccga gggcgggatg cggatggtgc cctcggtgtc gcggctgaac tcgaccccgt
     3241 tcttcttcag cacggcggcg gcgcggtcgg tgtcggccac ctgcaacgcc agcgccacca
     3301 gcgcgggcgg cggcggcgcc tcctcgagct cggcctcggg gtgcaattgg gtcaggtcgt
     3361 cggggctgga caggaagatc agcccgcgcc cggtatggat ggtcaccgtg ttgtcggtgg
     3421 gggtggccgc gtgcggcccg aagatggcat cccaggcggt aatggcctcg cccggctcgt
     3481 cgatgatggc ggtgacgctg gcgatgccga aggcgccgtt gggatgggcc atccattccg
     3541 ggtggcgttc gcgggcggcg gtgatgtgct gcaccaggcg ggcggccacg ccgggcgtgg
     3601 cctcggacgg cagcagcacc tgcgagaaca tgaaggtggt gccggcctcg tcgtccagct
     3661 tgcgcgacag cgagcgcgga tcggacacgt cgatgccggc cttgcgcagg gcggcgacgg
     3721 cggcggcgcc gtcctgggtg gacagcgaca ggccgatcat gccctcgccc ttggcggtga
     3781 aggcgcgcac ccgttcggcc tcggcgcccg atccctcggc ggccagcagc tcgacgtaat
     3841 cctggccgaa catggcgcag caattggcgg tgccccattc ggggtggtgg cccttgggcg
     3901 tcagcgcgaa gcccaggcgg cggaaggtct cggcggctgc gtccaggtcg cgcaccgcga
     3961 tgaccgggtg atccagcccc atgatgtggt tgtgcatgcc gcgccctccc tgctgacgga
     4021 aagcgggcag cgtgccacgg ccagggggtg gggagtcaat cgcagatagt ggcagcctgc
     4081 cgtcaggcgc agtatttcgc cacttcgtcc agcagcttgc ggatcgagat cggcttggtg
     4141 atgacctggt cgaagccttc cttcaagaat cccgccaccg aatcgggatc ggcgaaggcg
     4201 gtgacggcga ccaccggcat ggcccgggtg cggtcgtcgg ccttcagca
//
LOCUS       DATIKR010000426         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79314, whole genome shotgun sequence.
ACCESSION   DATIKR010000426 DATIKR010000000
VERSION     DATIKR010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79314"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VLL76_06700"
     CDS             complement(<1..315)
                     /locus_tag="VLL76_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV29227.1"
                     /translation="MAAQASSVRRTTCRLCGGGSLSLVLELAPTPPANAFVPATMVGR
                     EQARFPLDVFFCDDCGHVQLLDVVDPRALFEDYVYVSGTSPVFVKHFEDYAADLCRRF
                     LPK"
     gene            complement(322..759)
                     /locus_tag="VLL76_06705"
     CDS             complement(322..759)
                     /locus_tag="VLL76_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019480129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29228.1"
                     /translation="MTTKIRPVTAEERASWPKTVIVPLEKPFADERGSIQPLVDVPME
                     SCVLITSKAGTVRANHYHQTDWHYCYCMEGEIEYWERPTGSNEPPVKTVIGPGTMFFT
                     GPDKDHAMVFTKDTTFLTFGRNSRAQEVYEADVVRIPHLPPKG"
     gene            complement(795..>1508)
                     /locus_tag="VLL76_06710"
     CDS             complement(795..>1508)
                     /locus_tag="VLL76_06710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 2"
                     /protein_id="HSV29229.1"
                     /translation="CDHEDRPEVIPEMLREARALGGGKIVFAARTQRHDGKLFKAFYG
                     AYKRLYRLLTGMPIAIGNFSVVPGRLLQRLAGVWEIAVHFPAGIMKARLPYAAIGAAR
                     GRRAFGQSSMNIVNLVVHGLGGLAVHAEVAAVRVVLGTAAMSAAIVGYLVWVLFEKLF
                     TDLPPLGWTTQVMAVFGGVLLQGSLSALLLLFFAVSMRSQRPVIPFADHAAFIMEVST
                     LLAAAARDNTALRKPVEAE"
BASE COUNT          267 a          480 c          534 g          227 t
ORIGIN      
        1 cttaggcaag aagcgccgac acaaatcggc ggcgtaatcc tcgaaatgct tcacgaacac
       61 cggcgaggtg cccgagacgt agacgtagtc ctcgaacagc gcgcgcggat cgacaacatc
      121 cagcaattgg acgtggccgc aatcgtcgca gaagaagacg tcgagcggaa accgcgcctg
      181 ctcgcgcccg accatggtgg cgggcacgaa ggcgttggcc ggcggcgtcg gcgccagttc
      241 gagcaccagc gacagcgacc cgccgccgca cagccggcag gtggtgcgac gcaccgagga
      301 ggcctgcgcg gccattcgcg ctcagccttt cggcggcaga tgggggatgc gcaccacgtc
      361 ggcctcatag acctcctggg cgcgcgagtt gcggccgaag gtcaggaagg tggtgtcctt
      421 ggtgaacacc atggcgtggt ccttgtcggg gccggtgaag aacatggtgc cggggccgat
      481 cacggtcttg accggcggct cgttggaacc ggtcgggcgc tcccagtact cgatctcgcc
      541 ttccatgcag tagcaatagt gccaatcggt ctggtgatag tggttggcgc gaaccgtgcc
      601 ggccttggag gtgatcagga cacaggactc catcggcacg tcgaccaacg gctggatcga
      661 accgcgctcg tcggcgaagg gcttctccag cggcacgatc acggtcttgg gccagctggc
      721 ccgctcttcg gcggtcacgg ggcggatctt ggtggtcatt tggaggaatg tcctatggcg
      781 aatgtcgggc agttttactc tgcctcgacg ggtttccgca aggcggtgtt gtctcgcgcc
      841 gccgcggcaa gcagggtgct gacctccatg atgaaggcgg cgtggtcggc gaacgggatg
      901 acgggacgct gcgagcgcat gctgaccgcg aagaacagca gcagcagcgc cgacagcgaa
      961 ccctgcaaca gcacgccgcc gaacaccgcc atcacctggg tggtccagcc cagcggcggc
     1021 aggtcggtga acagcttttc gaacagcacc caaaccaggt agccgacgat cgcggcggac
     1081 atggcggcgg tgccgaggac gacgcgcacc gccgccactt cggcgtggac cgcgaggccg
     1141 ccgaggccgt gcaccaccag gttgacgatg ttcatgctgc tttggccgaa ggcgcggcgc
     1201 ccgcgcgcgg cgccgatggc ggcatagggc agccgggcct tcatgatgcc ggccgggaaa
     1261 tgcaccgcga tctcccacac gccggccagc cgctgcagca ggcgcccggg caccacgctg
     1321 aaattgccga tggcgatggg catgccggtc aacagccggt acaggcgctt gtaggcgccg
     1381 tagaacgcct tgaacagctt gccgtcgtgg cgctgggtgc gggcggcgaa gacgatcttg
     1441 ccgccgccca gggcgcgcgc ctcgcgcagc atctcgggga tgacctcggg gcggtcctcg
     1501 tggtcgca
//
LOCUS       DATIKR010000427         1852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175983, whole genome shotgun sequence.
ACCESSION   DATIKR010000427 DATIKR010000000
VERSION     DATIKR010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175983"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..135)
                     /locus_tag="VLL76_06715"
     CDS             complement(<1..135)
                     /locus_tag="VLL76_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV29230.1"
                     /translation="MLSVLVTGGAGYVGSHACKALAAAGWQPVTYDNLSTGHRDLVRW
                     G"
     gene            complement(259..>1852)
                     /locus_tag="VLL76_06720"
     CDS             complement(259..>1852)
                     /locus_tag="VLL76_06720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV29231.1"
                     /translation="NLHQELMDGRRVKTQQLVEVAHGIVSHYVKEAQAGRLSADDAKA
                     AALGALKGLRYAGSEYFWVNDMTPRMVMHPIKPELDGKDLSEFKDPAGKKLFVAFVEE
                     VARNKAGFVDYLWPKPGHESPVPKVSYVKGVDAWGWVVGSGIYIDDVDTAFWAEVQSQ
                     GLTNGAFIAVVLLLSWWIGRAATGAMGKVTDDMMKLAGGDTSIALDGQDRKDEIGGML
                     RAVVVFRDNAIEVKRLQADQDATRRQAEEERRRTLQQLARELEEGISGAANAVNAAAS
                     QMRATATAMAGTADRTTQETSEVAAAVTQTTANVETVASAAEELNASIGEIARQVHQS
                     TDIAREAVGAAHRTDEVMRGLSEAAGKIGEVVSLINDIAGQTNLLALNATIEAARAGD
                     AGKGFAVVANEVKHLANQTAKATGDISAQIAGIQATTGQAVEAIREIGATIGKMSEIA
                     SSIAVAVEQQGAATQEIARNIAGAATGAQEVSHHVGVVTEAATETGNAAREVRQAAEA
                     LAKDSQGLKSGLERFLDGLRRM"
BASE COUNT          248 a          622 c          660 g          322 t
ORIGIN      
        1 cccccagcga acgaggtcac gatggccggt ggacagattg tcgtaggtga cgggttgcca
       61 gccggcggca gccagggcct tgcaggcgtg actgccgaca tagccggctc cgccggtgac
      121 caggacggac agcatgcgcc ctccttcgcc ggtgtgagaa ccatgtcggc aaaggtggcg
      181 cggtcgccat cacggggcaa aagggcatag ggcggacggc gggcgatttc ggcgaaagtg
      241 gcccgccgtc cggatgggtc acatgcggcg caggccgtcc aggaagcgct ccaggccgct
      301 cttgaggccc tgggaatcct tggccagcgc ctcggccgcc tgacgcacct cgcgcgccgc
      361 gttgccggtc tcggtggcgg cctcggtcac caccccgacg tggtgcgaca cctcctgggc
      421 gcccgtcgcg gcaccggcga tgttgcgggc gatctcctgg gtggcggcac cctgctgctc
      481 gaccgccacc gcgatggacg aggcgatctc gctcatcttg ccgatggtgg cgccgatttc
      541 gcggatggcc tcgaccgcct ggccggtggt ggcctggatg ccggcgatct gggcgctgat
      601 gtcgccggtg gccttggcgg tctggttggc gagatgcttg acctcgttgg cgaccacggc
      661 gaagcccttg ccggcatcgc ccgccctcgc cgcctcgatg gtggcattca gggccagcag
      721 gttggtctgg ccggcgatgt cgttgatcag gctgaccacc tcgccgatct tgccggcggc
      781 ctcggacagg ccgcgcatca cctcgtcggt gcgatgggcc gcgcctaccg cctcgcgggc
      841 gatgtcggtg gattggtgga cctggcgggc gatctcgccg atcgaggcgt tgagttcctc
      901 ggcggcggac gccaccgtct cgacattggc ggtggtctgg gtgacggcgg cggcgacctc
      961 ggaggtttcc tgggtggtgc ggtcggcggt gccggccatg gcggtggcgg tggcgcgcat
     1021 ctgggacgcg gcggcgttga ccgcgttggc ggcgccggaa atgccttcct ccaactcacg
     1081 ggccaattgc tgcagggtcc ggcggcgctc ctcctcggcc tggcggcggg tggcgtcctg
     1141 gtcggcctgc aggcgcttga cctcgatggc gttgtcgcgg aacaccacga cggcgcgcag
     1201 catgccgccg atctcgtcct tgcggtcctg gccgtccagc gcgatcgacg tgtcgccgcc
     1261 ggccagcttc atcatgtcgt cggtgacctt gcccatggcg ccggtcgcgg cgcggccgat
     1321 ccaccacgac agcagcagca ccacggcgat gaaggcgccg ttggtcaggc cctgcgactg
     1381 cacctcggcc cagaacgcgg tatccacgtc gtcgatgtag atgcccgagc cgaccaccca
     1441 gccccaggca tccacgccct tgacgtagga caccttgggc accggcgatt cgtggccggg
     1501 cttgggccac aggtaatcga cgaagccggc cttgttgcgg gcgacctcct caacgaaggc
     1561 gacgaacagc tttttgccgg cggggtcctt gaactcggac aggtccttgc cgtccagctc
     1621 cggcttgatc gggtgcatga ccatgcgcgg ggtcatgtcg ttgacccaga aatattccga
     1681 accggcgtag cgcaacccct tcagggcacc caacgcggcg gccttggcgt catcggccga
     1741 caggcgtccg gcctgggctt ccttgacgta gtgggacacg atcccgtggg cgacctcgac
     1801 cagttgctgc gtcttgaccc ggcggccatc catcaattcc tggtgaaggt tg
//
LOCUS       DATIKR010000428         1900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_175986, whole genome shotgun sequence.
ACCESSION   DATIKR010000428 DATIKR010000000
VERSION     DATIKR010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175986"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VLL76_06725"
     CDS             <1..235
                     /locus_tag="VLL76_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29232.1"
                     /translation="QPAKPAPVLAKAEPAKPAPKAVAKAPAPVAAPKVAVAPLPAPQP
                     AIPAAHPSAPRRTIVIQSPALATTDLNSSGEAR"
     gene            232..>1900
                     /locus_tag="VLL76_06730"
     CDS             232..>1900
                     /locus_tag="VLL76_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HSV29233.1"
                     /translation="MSFFAPKPRVPGFHAGEDLQNTPAAVRIDGVRKRALETGRSRLV
                     ATALMFLAAYGVIGARMVDVAVLDQNPAKPRPLPQARTEGLDMERADVVDRNGIILAT
                     SLPTVSLYAKANEVLDAKEATDKLLSVLPDLDRADLQAKLSSGKPFLYLRRNLTPRQQ
                     YDVNALGIPGLYFEKGERRVYPHGNLVAHIVGMTDIDNKGIAGIEKRFDTALRSGTEP
                     LRLSVDIRVQTLVRNELVKAVETFRAAGATGMVLDVHTGEMLAMVSLPDYDPNDPPAG
                     ANDALFNRATKGAYEMGSTFKLFNTAMALESGKINLNSSFDATRPLKFGGHDIHDDHA
                     QNRWMTVPEILIHSSNIGSARMALEAGTDFQKAFMGRIGMLTTPTLELPEVGGPLVPS
                     PWREINTITISFGHGLSVTPLQLMSGTAALVNGGLYRPATLVARADDGPVPGERVLKQ
                     KTSDSVRNLMRMVVTEGTGKKADVPGYEVGGKTGTAEKAVNGSYRKKAVLSSFVAAFP
                     MDNPRYVVLTMIDEPQGTKETYGFITAGWTAAPTAGRIIAQIAPMMGV"
BASE COUNT          326 a          715 c          597 g          262 t
ORIGIN      
        1 ccagcccgcc aagccggccc cggtactcgc caaggccgag ccggccaagc ccgcgcccaa
       61 ggccgtcgcc aaggctcccg cgcccgtcgc cgcgcccaag gtcgccgtcg cgccgttgcc
      121 ggcgccgcag ccggccattc cggccgccca tccctcggcg ccgcgccgca ccatcgtgat
      181 ccagtcgccg gcgctggcga ccaccgacct gaattccagc ggggaggccc gatgagcttc
      241 ttcgcgccca agccgcgcgt ccccggcttc catgccggcg aagacctcca gaacaccccg
      301 gccgccgtcc gcatcgacgg cgtgcgcaag cgggcgctgg agaccggacg ctcgcgcctg
      361 gtcgcgaccg cgctgatgtt cctggccgcc tatggcgtga tcggcgcccg catggtggac
      421 gtcgccgtac tcgaccagaa cccggccaag ccccgccccc tgccccaggc ccggaccgaa
      481 ggcctggaca tggagcgggc cgacgtggtc gatcgcaatg gcatcatcct ggcgaccagc
      541 cttcccaccg tttcgctcta tgccaaggct aacgaggtcc tggacgccaa ggaagccacc
      601 gacaagctgc tgtccgtgct gcccgacctg gaccgcgccg acctgcaggc caagctgtcg
      661 tcgggcaagc cgttcctcta tctgcgccgc aacctgacgc cccgtcagca atacgacgtc
      721 aatgccctgg gcatccccgg tctgtacttc gagaagggcg aaaggcgggt ctacccccac
      781 ggcaacctcg tcgcccatat cgtcggcatg accgacatcg acaacaaggg catcgccggc
      841 atcgaaaagc ggttcgacac cgcgctgcgc tcgggcaccg agccgctgcg cctgtcggtg
      901 gacatccgcg tccagacgct ggtgcgcaac gagttggtca aggcggtcga gaccttccgc
      961 gcggcgggcg ccaccggcat ggtgctcgac gtccacaccg gcgagatgct ggcgatggtg
     1021 tcgctgcccg actacgaccc caacgacccg ccggccggcg ccaacgacgc cctgttcaac
     1081 cgcgccacca agggcgcgta cgaaatgggc tcgaccttca agctgttcaa cacggcgatg
     1141 gccctggaat cgggcaagat caacctgaac tcgtcgttcg acgccacccg gccgctgaag
     1201 ttcggcggcc acgacatcca cgacgaccac gcccagaacc gctggatgac ggttcccgag
     1261 atcctgatcc attcgtcgaa catcggttcg gcccgcatgg cgctggaggc cggcaccgat
     1321 ttccagaagg ccttcatggg ccgcatcggc atgctgacca cgccgaccct ggaactgccc
     1381 gaggtcggcg gcccgctggt gcccagcccc tggcgcgaga tcaacaccat caccatctcg
     1441 ttcggtcacg gcctgtcggt gacgccgctg cagctgatga gcggcaccgc cgccctggtc
     1501 aacggcggcc tctaccgtcc ggccaccctg gtggcccgcg ccgacgacgg cccggttccg
     1561 ggcgagcggg tgctgaagca gaaaacctcg gacagcgtgc gcaacctgat gcgcatggtg
     1621 gtcaccgagg gcaccggcaa gaaggccgac gtgccgggct acgaggtcgg cggcaagacg
     1681 ggaacggccg agaaggcggt caacgggtcg taccgcaaga aggcggtgct gtcctcgttc
     1741 gtcgccgcct tccccatgga caacccccgc tacgtcgtcc tgaccatgat cgacgaaccc
     1801 cagggaacca aggagaccta cggtttcatt acggcgggct ggacggcggc tccgacggcc
     1861 ggccgcatca tcgcccagat cgcgccgatg atgggcgtca
//
LOCUS       DATIKR010000429         3507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79341, whole genome shotgun sequence.
ACCESSION   DATIKR010000429 DATIKR010000000
VERSION     DATIKR010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79341"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VLL76_06735"
     CDS             complement(<1..395)
                     /locus_tag="VLL76_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HSV29234.1"
                     /translation="MTAEVQQNASPEGAQPKPSPPSSFFRQFLRLAGPYWNSEEKWKV
                     RGLTALLVALTILQVFTPIMVNLWSARLFDALEQRSMDRFLSLVGALGFILVYAMAVT
                     AIHLWIKRRLQLGWRRWLTKRLLNSWMEEG"
     gene            767..1954
                     /locus_tag="VLL76_06740"
     CDS             767..1954
                     /locus_tag="VLL76_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSV29235.1"
                     /translation="MVVGRGANLLRVLLVEDNPGDARLVTMALAASGNPRFAVTHVVR
                     LADALAHLRGDTPVDVVLLDLTLPDSSGIATLSRLQEAAPNLAIVVMTGLDDPAFADY
                     ALEVGAQDYLVKSDDPERTVVRAIRYAITRMNAQLERQALMDRLSAQQQRLMQELSAA
                     RAMQFDLLPRPELTNGALAALGMSVEAYFEPSSGIGGDLWGCLEAGPDCMSFYAFDFS
                     GHGIGAALNVFRLHALIRDHWVPGRGPAETLADLGSALSGLLGTGQFATMILCTLDCR
                     RDELVWAAAGAPAPLAMVDGGMEFLDTTGLPLGLSKNPHYDNHSMPFPRGSTLFIYSD
                     AVVEATDDADQLLGEEALAEMVAATIAADGRFSVDGLLDRLFARVRLPIEDDLTAVSI
                     SRL"
     gene            1966..2850
                     /locus_tag="VLL76_06745"
     CDS             1966..2850
                     /locus_tag="VLL76_06745"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29236.1"
                     /translation="MSDLTHDAARTAAAELTAIGDQIANSSKDLTGRFFALAAHAGDQ
                     TARVEDVMRLTATLQVDGREVDFSQVVAHLGDTLGSFVSEVLHLSKQAVTMVRTIDAI
                     LENIHGLERLVDGIDRVNAKTNLLALNARIEAERAGAAGRSFGVVAGEVRDLARTTAE
                     LAASIKQEIGTIAAALKEGHETLGEVASMDMTREIDAKDEVDRTLAALVERDRKVAAV
                     AGRSLDSAREIEQAISTIVTDMQFEDRTRQRLERVAGLLARIAASDHITSEDIERLTK
                     GLEAPGGGASAEEDVELF"
     gene            2869..>3507
                     /locus_tag="VLL76_06750"
     CDS             2869..>3507
                     /locus_tag="VLL76_06750"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSV29237.1"
                     /translation="MEIKLADGAERTYFLSGRLTYKDNETFKDMIADIGSGGGRTIVI
                     DIHALEHLDSFGIGLFLIARDEAERCGNRVVIRNPQGAVQRIFSLAKLDAALPVETAG
                     RAPAPPPVRRVVAPPSPTRAGLAVSAVHEAEGGFLSVALSGRFTFADHDAFEDFVRAM
                     NGHTGKRLMIDLTGLDFMDSAGLSMLLILRDEVERHGNTLELAAAGRVAQLLR"
BASE COUNT          568 a         1207 c         1178 g          554 t
ORIGIN      
        1 ccttcctcca tccagctgtt gagcagccgc ttggtcagcc agcgccgcca gcccagttgc
       61 agccgccgct tgatccacag atggatggcg gtcaccgcca tggcgtagac caggatgaat
      121 cccagcgcgc cgaccagcga caggaagcga tccatggagc gctgctccag ggcgtcgaac
      181 agccgggcgc tccacaggtt gaccatgatc ggggtgaaca cctgcaagat ggtcagcgcc
      241 accagcaggg ccgtcaggcc ccgaaccttc catttctctt cggaattcca atagggaccg
      301 gcaaggcgaa ggaattgccg gaaaaagctc gacggcggcg acggcttcgg ctgcgctcct
      361 tccggagaag cattttgctg tacctcggcc gtcatcggca gaccttcgcg ccccgcccgc
      421 tattggacat tcttctttta cgcagcaccc gccggcaaag taaaggtcgg cgtggcgtct
      481 ggcctatcca tccggccttc cggccgggtc gcgcacccac cgattttcga tgcgggtaac
      541 cgacggttga tggtttcgcc atcccatgtt cgcgcaaact atagtatgat gtacttaacc
      601 taaagttaga ggaaaagggg ggcgggtgga catgactcgt cggagtggcg gggagggcgc
      661 gtcggtcgcg gaattccccc gaagggccgg tttacggacc ctggtcaacc gctctcgccc
      721 atggacggag ccggatgaac ttgccgccgc gctgcatgtg ccggcgatgg tggtcgggcg
      781 cggcgccaac ctgttgcggg tgctgctggt cgaggacaat cccggcgacg cccgcctggt
      841 gaccatggct ctggccgcct ccggcaatcc ccgtttcgcc gtcacccacg tggtgcgcct
      901 ggccgacgcc ctggcccatc tgcgcggcga caccccggtg gacgtggtgc tgctcgacct
      961 caccctgccc gattccagcg gcatcgccac gctgtcccgg ctgcaggaag cggcgcccaa
     1021 tctggccatc gtggtgatga ccggcctcga cgaccccgcc ttcgccgatt acgcgctgga
     1081 agtcggcgcc caggattacc tggtcaagag cgacgatccc gagcgcacgg tggtgcgcgc
     1141 catccgctat gccatcaccc gcatgaacgc ccagttggaa cgtcaggccc tgatggaccg
     1201 gttgtcggcg cagcagcagc ggctgatgca ggaattgtcg gccgcccgcg ccatgcagtt
     1261 cgacctgctg ccgcgccccg aactgaccaa cggcgccctg gccgcgctgg gcatgtcggt
     1321 cgaggcctat ttcgagccgt cctcgggcat cggcggcgac ctgtggggct gcctggaggc
     1381 cggacccgat tgcatgagct tctacgcctt cgacttctcg ggccacggca tcggcgcggc
     1441 gttgaacgtg ttccgcctgc acgcgttgat ccgcgaccat tgggtgcccg gacgcggccc
     1501 ggcggaaaca ctggccgacc tcggctcggc gctgtcgggg ctgttgggca ccggccagtt
     1561 cgccaccatg atcctctgca ccctcgattg ccgccgcgac gaattggtgt gggcggcggc
     1621 gggcgcgccg gcgccgctgg ccatggtcga cggcggcatg gaattcctcg acaccaccgg
     1681 cctgccgctg gggctgtcca agaaccccca ttacgacaac cattccatgc cgttcccgcg
     1741 cggcagcacg ctgttcatct acagcgacgc ggtggtggag gccaccgacg atgccgacca
     1801 gttgctgggc gaggaagcct tggccgagat ggtggccgcc accatcgccg ccgacggccg
     1861 cttcagcgtg gacggattgc tcgaccgcct gttcgcccgc gtccggttgc ccatcgagga
     1921 cgacctgacg gcggtctcga tcagccggct gtgaaggagg cttgcatgag cgacctgacc
     1981 catgacgccg cccgcaccgc cgccgccgaa ctgaccgcca tcggcgacca gatcgcgaat
     2041 tcgtccaagg acctgaccgg ccgcttcttc gccctggccg cccatgccgg cgaccagacc
     2101 gcccgggtcg aggacgtcat gcgcctgacc gcgacgctgc aggtggacgg ccgcgaggtc
     2161 gatttctctc aggtggtcgc ccatctcggc gacaccctgg gctcgttcgt gtccgaggtg
     2221 ctgcacctgt ccaagcaggc cgtcaccatg gtgcgcacca tcgacgccat cctcgagaac
     2281 atccacggcc tggagcggct ggtggacggc atcgaccgcg tcaacgccaa gaccaacctg
     2341 ctggcgctca atgcccgcat cgaggccgag cgcgccggcg ccgccggccg gtcgttcggc
     2401 gtggtggccg gcgaggtgcg cgacctggcc cgcaccaccg ccgaactggc cgccagcatc
     2461 aaacaagaga tcgggaccat cgcggcggcg ctgaaggaag gccacgagac cctgggcgaa
     2521 gtggcgtcca tggacatgac gcgcgagatc gacgccaagg acgaggtcga ccgcaccctg
     2581 gccgccctgg tcgaacgcga ccgcaaggtg gcggcggtgg cgggccgcag cctggacagc
     2641 gcgcgcgaga tcgagcaggc catcagcacc atcgtcaccg acatgcagtt cgaggaccgc
     2701 acccgccaac ggctggagcg cgtcgccggg ctgctggcgc gcatcgccgc gtcggaccac
     2761 atcacgagcg aggatatcga acggctgacg aaagggctgg aggctcccgg cgggggcgcc
     2821 tcggccgagg aagacgtcga gctgttctag acaagggggg attgggcaat ggagatcaaa
     2881 ttggccgacg gggccgagcg gacctatttc ctgagtgggc ggctgaccta caaggacaac
     2941 gagacgttca aggacatgat cgccgacatc ggcagcggcg gcggccgcac catcgtcatc
     3001 gacatccacg cgcttgaaca tctcgattcc ttcggcatcg gcctgttcct gatcgcccgc
     3061 gacgaggccg aacggtgcgg caaccgggtg gtgatccgca atccccaggg cgcggtgcag
     3121 cgcatcttca gcctggccaa gctcgacgcc gcgctgccgg tggagacggc cggccgcgcc
     3181 cccgccccgc cgccggtgcg ccgggtggtg gcgccgcctt cgccgacccg ggccgggctg
     3241 gcggtgtcgg ccgtccacga ggccgagggc ggtttcctgt cggtggcgct gtcgggccgc
     3301 ttcaccttcg ccgaccacga cgcgttcgag gatttcgtgc gggccatgaa cggccatacc
     3361 ggcaaacgcc tgatgatcga cctgaccggg ctggacttca tggattcggc cggcctgtcc
     3421 atgctgctga tcctgcgcga cgaggtcgag cgccacggca acacgctgga actggcggct
     3481 gcggggcggg tggcgcagtt gctgcgg
//
LOCUS       DATIKR010000430         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_17958, whole genome shotgun sequence.
ACCESSION   DATIKR010000430 DATIKR010000000
VERSION     DATIKR010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17958"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1460
                     /locus_tag="VLL76_06755"
     CDS             <1..1460
                     /locus_tag="VLL76_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007657577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV29238.1"
                     /translation="PLTADLRTDVCVVGAGIAGLSVAYLLARAGRRVTVVESGPGIGL
                     GETGRSTAHLANAVDDRFTVLEKMFGYDGARLVASSHGAAIDTIAGIVADEGIHCDFE
                     RLDGYLFNPPQGGIDLVGELEASRRAGLDCEMAVRAPIAGFDTGPAIRYRHQGRMDPL
                     AYVRGLARAVTARGGRIFTGTHVTSVEGGHPARVSTAQGFHVLCDAVVVATNVPVNDR
                     IALHGKMAPYRTYVVAATVSPEAAADALYWDSAAPYHYVRFGRAGDGSTMLVVGGEDH
                     RVGHPAHGDERWGRLEAWARQRFPSFGAVRWRWSGQIMEPADHVAFIGRNPMDEENVF
                     VVSGDSGNGITHGTIAGLLLSDLVLGRDNPWAELYDPSRVTLKAATGYADTNLHVAEH
                     YADWLTGGDVDDVRDVAPGSGAVIRSGLSKMAVYRDDGGTVHKRSAVCTHLKCIVAWN
                     DAEKSWDCACHGSRFDRFGRVVNGPANEPLSPIEE"
     gene            1572..>2307
                     /locus_tag="VLL76_06760"
     CDS             1572..>2307
                     /locus_tag="VLL76_06760"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV29239.1"
                     /translation="MTAPSILVTVEPPGTAWPHVDTLVRELAGLGVEVTVAAVTPLRP
                     GQRIEYAGIPGVELLACPFPAASPGDHLANRGRIAEWLLSVEEMLNPDVVHLTGYLHA
                     GLPWCGKVLVAGYPGSGAAYGRLNAEQRRQCRLAFQHGLRGADMVVTPTETMMTALTK
                     HFGVVPGRVIRDGRDPARYSAVAKEPVIFSSGTQRDDADAPSALERAASSLSWPVVIA
                     GDQGGSGLRPVRLKGVSALGRVHPAQL"
BASE COUNT          325 a          829 c          805 g          348 t
ORIGIN      
        1 agccgctgac tgccgacctg cgcaccgatg tctgcgtggt cggggcgggg atcgccgggc
       61 tatcggtggc ctatctgctg gcgcgcgccg gccggcgggt gacggtggtg gaatccggcc
      121 ccggcatcgg cctgggcgag accggccgtt cgaccgcgca tctggccaac gcggtggacg
      181 accgcttcac cgtgctcgag aagatgttcg gctatgacgg cgcccgcctg gtggcctcca
      241 gccacggcgc cgccatcgac accatcgccg gcatcgtcgc cgacgaagga atccattgcg
      301 acttcgaacg gctggacggc tatctgttca atccgcccca gggcggcatc gacctggtcg
      361 gcgaactcga ggcatcgcga cgcgcgggcc tcgattgcga gatggcggtg cgcgccccca
      421 tcgccggctt cgacaccggc cccgccatcc gctatcgcca ccagggccgc atggacccgc
      481 tggcctatgt gcgcgggctg gcccgggccg tgacggcgcg cggcggccgc atcttcaccg
      541 gcacccacgt gacctcggtc gagggcggcc accccgcccg cgtcagcacg gcgcagggct
      601 tccatgtgct gtgcgacgcc gtggtggtgg cgaccaacgt gccggtcaac gaccgcatcg
      661 ccctgcacgg caagatggcg ccctatcgca cctatgtggt ggcggcgacc gtcagccccg
      721 aggcggcggc ggatgcactc tattgggaca gtgccgcgcc ctatcactac gtccgtttcg
      781 gccgcgccgg cgacggctcg accatgctgg tcgtcggcgg cgaggaccac cgcgtcggcc
      841 atcccgccca tggcgacgag cgctggggcc ggctggaggc atgggcgcgg cagcgctttc
      901 ccagtttcgg cgcggtgcgc tggcggtggt cgggccagat catggaaccg gccgaccatg
      961 tcgccttcat cggccgcaac cccatggacg aggaaaacgt cttcgtggtg tcgggcgatt
     1021 ccggcaacgg catcacccac ggcaccatcg ccggcctgct gctgtcggat ctggtgctgg
     1081 gccgcgacaa cccgtgggcg gagctgtacg acccgtcgcg ggtgacgctg aaggcggcca
     1141 ccggctatgc cgacaccaac ctgcacgtgg ccgagcatta tgccgattgg ctgaccggcg
     1201 gcgacgtcga cgacgtccgc gacgtggcgc cgggcagcgg tgcggtgatc cgctcgggcc
     1261 tgtccaagat ggcggtctac cgcgacgacg gcggcaccgt gcacaagcgc tcggccgtat
     1321 gcacccacct caaatgcatc gtggcgtgga acgacgccga gaaaagctgg gattgcgcct
     1381 gccacggctc gcgcttcgac cgcttcgggc gggtggtcaa cggccccgcc aacgaaccgc
     1441 tttcccccat cgaggagtga ccgggcagtg cctaccccca atgtccccag cacttcccca
     1501 catgacgccc cctgcccgcg gcgcggatgt gatgccatgg cggtcgtggt cgcggcaggg
     1561 aaggacatac catgacggcc ccaagcatcc tggtcaccgt cgagccaccg ggcaccgcct
     1621 ggccccatgt ggatacgctg gtgcgcgaac tcgcgggcct cggcgtcgag gtgacggtgg
     1681 cggccgtcac cccgctgcgg ccggggcagc gcatcgaata tgccggcatt cccggggtcg
     1741 aactgctggc ctgcccattc cccgccgcca gtccgggcga ccatctcgcc aatcgcggcc
     1801 gcatcgccga atggctgctg tcggtcgagg aaatgctcaa tcccgacgtg gttcacctga
     1861 ccggctatct gcatgccggc ctgccgtggt gcggcaaggt gctggtggcc ggctatcccg
     1921 gcagcggcgc cgcctatggc cggctcaacg ccgagcagcg ccggcaatgc cggctggcct
     1981 tccagcatgg cctcaggggc gccgacatgg tggtcacccc gaccgagacc atgatgacgg
     2041 cgctgaccaa gcatttcggg gtcgtccccg gccgcgtcat ccgcgacggc cgcgaccccg
     2101 cgcgctattc ggccgtggcc aaggagccgg tgatcttttc gtctgggacg cagcgcgacg
     2161 acgccgacgc gccgtccgcg ttggaacgcg ccgcctccag tctgtcctgg ccggtggtga
     2221 tcgccggcga ccagggcggc tcgggcctgc ggccggtgcg gctcaagggc gtgtcggcgc
     2281 tgggccgcgt ccatccggcg caactgg
//
LOCUS       DATIKR010000431         2195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_163700, whole genome shotgun sequence.
ACCESSION   DATIKR010000431 DATIKR010000000
VERSION     DATIKR010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163700"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..1334)
                     /locus_tag="VLL76_06765"
     CDS             complement(51..1334)
                     /locus_tag="VLL76_06765"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HSV29240.1"
                     /translation="MRLPLILAALLCAATPALAQQAAPLDEARAAIADGRLDEADHIL
                     AGIREELVDRNDLDFLRGTSALARGEYDRAISAFRAILARDPALHRVRLDLARALFLA
                     GDDGAAEHHFRIAQAADLPPAVQRNVDLFLDQIKRRKRWSIEIALGIAPDTNINAATS
                     AQRVDLYGLPFTLDDNARKQSGIGVAGSLGAAYHLPLDADTRLVMGGRLAGMDYAGDR
                     FDDRTLSAHLGPRFLVGQSTELTTSAIAARRWYGGEGYSTALGAKVEAQTALSPRLLA
                     HGSISLQRLNYDDLPALDGPVATVTAGLTYGLDDVSFIRVDLAVMREMARDEPFRDTQ
                     YHAGATYFRELPWGFGVSLGGGVTLARHDAPLPAFATTRADDTWTARMTVSNRRLEVF
                     GFTPVLSVTHSERLSNIDVYDFERDRVEVGITRRF"
     gene            complement(1340..>2195)
                     /locus_tag="VLL76_06770"
     CDS             complement(1340..>2195)
                     /locus_tag="VLL76_06770"
                     /inference="COORDINATES: protein motif:HMM:NF013466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HSV29241.1"
                     /translation="GGGGGGGGGGTGAGAGSVSNSNSTSSQNSNTQSNASASGTLTAA
                     RGRGLETGTLNPALAADAGGGDARVSLTNGTATSLQLPNGQTAQLGPPTTNADSTRTS
                     SGTTGDGSVVTVTSHRTRSNLSYSDYGTWAVAPTGGPAGVAVYAVGSPTPLTAVPTTG
                     SATYLGHAAGTASLGGSNYSFKGNTQLTANFAVGSINGQITGLQATGAGGAPAGSMND
                     IALAGSINGNGFAGTALPGPAGSLDIGHTSGSFGGGFAGPNAEEASGTFKMEGGGDAV
                     IGSFGARR"
BASE COUNT          276 a          744 c          845 g          330 t
ORIGIN      
        1 ggtcagagtc ctaaatccga ccgctccagt acaccccctt ccccccccgc tcaaaacctc
       61 ctcgtaatcc ccacctccac ccggtccctc tcgaagtcgt agacgtcgat gttggacagc
      121 cgctcgctgt gggtgacgct cagcaccggg gtgaagccga acacctcgag gcggcggttc
      181 gacaccgtca tccgggcggt ccaggtgtcg tcggcgcggg tggtggcgaa ggcggggagg
      241 ggggcgtcgt ggcgggcgag ggtgacgccc ccgcccagcg acaccccgaa gccccacggc
      301 agttcgcgga aataggtggc gccggcgtgg tattgggtgt cgcggaacgg ttcgtcccgc
      361 gccatctcgc gcatcaccgc cagatccacc cggatgaagc tgacgtcgtc gaggccgtag
      421 gtgaggccgg ccgtcaccgt cgccaccggg ccgtccagcg ccggcaggtc gtcgtaattc
      481 agccgctgca ggctgatcga gccgtgggcc agcaggcggg gcgacagggc ggtctgggcc
      541 tcgaccttgg cgcccagggc ggtgctgtag ccctcgccgc cgtaccagcg ccgggcggcg
      601 atggcgctgg tggtcagttc ggtggattgg ccgaccagga agcgcgggcc gagatgggcc
      661 gacagggtgc ggtcgtcgaa gcggtcgccg gcatagtcca tgccggccag ccggccgccc
      721 atcaccagcc ttgtgtcggc atccagcggc aggtgatagg ccgcgcccag gctgccggcc
      781 acgccgatgc ccgattgctt gcgggcgttg tcgtccagcg tgaagggcag gccgtagagg
      841 tcgacccgct gggcgctggt ggcggcgttg atgttggtgt cgggggcgat gcccagggcg
      901 atttcgatgc tccagcgctt gcgccgcttg atctggtcga ggaacaggtc gacgttgcgc
      961 tgcaccgccg gcggcaggtc ggcggcctgg gcgatgcgga aatggtgctc ggcggcgccg
     1021 tcgtcgccgg ccaggaacag ggcgcgcgcc aggtcgagcc gcacccggtg cagcgccggg
     1081 tcgcgggcca ggatggcgcg gaaggcggag atggcgcgat catactcgcc gcgcgccagg
     1141 gccgacgtgc cgcgcaggaa atccaggtcg ttgcggtcga ccagttcctc gcggatgccg
     1201 gccaggatgt ggtcggcctc gtcgagccgg ccgtcggcga tggcggcccg cgcctcgtcg
     1261 agcggggccg cctgttgggc gagcgccggg gtggccgcgc acagcagcgc ggccaggatc
     1321 aggggcaggc gcattgcggc tagcgacgcg ccccgaacga accgatcacc gcatcgccgc
     1381 cgccttccat cttgaaggtg ccgctggcct cctcggcatt ggggccggcg aagccgccgc
     1441 cgaagctgcc cgaggtatgg ccgatgtcga ggctgccggc cggccccggc agcgccgtgc
     1501 cggcaaagcc gttgccgttg atgctgccgg ccagggcgat gtcgttcatg ctgcccgccg
     1561 gggcgccgcc ggcgccggtg gcctgcaggc cggtgatctg gccgttgatg ctgcccacgg
     1621 cgaaattggc ggtcagttgg gtgttgccct tgaagctgta attgctgccg ccgaggctgg
     1681 cggtgccggc ggcatggccg agataggtgg cgctgccggt ggtcggcacc gccgtcagcg
     1741 gcgtcggcga ccccacggca tagaccgcca cccccgccgg cccgccggtc ggcgccaccg
     1801 cccaggtgcc gtaatcggaa tagctgaggt tcgaccgcgt gcggtgggac gtcaccgtca
     1861 cgacgctgcc gtcgccggtg gtgccggacg aggtgcgcgt ggagtcggcg ttggtcgtcg
     1921 gcgggcccag ttgggcggtc tggccgttgg gcagttgcag gctggtcgcg gtgccgttgg
     1981 tcaggctgac gcgggcatcg ccgccgccgg catccgccgc cagggccggg ttcagcgttc
     2041 cggtctccag cccgcgaccg cgcgcggcgg tcagggtgcc gctggcgctg gcgttggact
     2101 gggtgttgga gttctggctg gaggtggaat tggagttcga cacgctgccc gcgccggcgc
     2161 ccgtcccgcc accgccacca ccgccgccgc cgccg
//
LOCUS       DATIKR010000432         5377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_18034, whole genome shotgun sequence.
ACCESSION   DATIKR010000432 DATIKR010000000
VERSION     DATIKR010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18034"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VLL76_06775"
     CDS             <1..692
                     /locus_tag="VLL76_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TOBE-like domain-containing protein"
                     /protein_id="HSV29242.1"
                     /translation="KVGRLLDLVHLAGFARRYPSQLSGGQRQRVALARALAVEPRLLL
                     LDEPFGALDAQVRKDLRRWLRQLHEEMGLTTVFVTHDQEEALELADEVVVMNRGRIEQ
                     VGTPQEIYDNPATPFVFNFLGNVNRLDCDVRAGEARGAGWRAPAAGMADGPCVAFVRP
                     HDVEVAADTGVPATIRHVTVLGPVVRADLVLGDGTAVEAEISREAHARFALTPGRKTA
                     LAFRKMAVFPA"
     gene            complement(689..1387)
                     /locus_tag="VLL76_06780"
     CDS             complement(689..1387)
                     /locus_tag="VLL76_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HSV29243.1"
                     /translation="MRLVRLLANLGYGSQKDVRALLRDGRVTARDGARLAPDSKVAHD
                     DLMVDGETLDPPQGVVLMLNKPDGYTCSTSDPGRVVYELLPPRFARRNPVIAPVGRLD
                     RDTTGLLLLTDDGALLHKIISPKSRIPKTYDVTLADPLAGTEADLFASGTLMLRSEKD
                     PLLPASLEVLGDCQARLTIVEGRYHQVKRMFAAAGNRVETLHRSRIGGLELGVLQPGE
                     WRVLTPEEVEAVFR"
     gene            1455..2483
                     /locus_tag="VLL76_06785"
     CDS             1455..2483
                     /locus_tag="VLL76_06785"
                     /EC_number="2.1.1.172"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0052916 - 23S rRNA
                     (guanine(1835)-N(2))-methyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29244.1"
                     /translation="MSDALTALTYPFAAGLLPMPAPGRGVFLRAEPGLGSEWTPLLVC
                     QQTFKPAFDALTARGFQVTIEASGTFDLALVLVSKHKAETLANIASAWSLLRPGGTLV
                     CAGGNDVGAASILREVKAAVGDLATASKHHCKVFWATRTADSPPAMAQWHQAGRLQRV
                     AATGCQSRPGIYNWDKVDRGSALLAAHLPADMAGRVADLGAGWGYLGLEVLKARPGVT
                     ALDLFEAEKLALDAARANFEGARVPVGFHWCDVAAGVPGGYDWVVTNPPFHAGKATDV
                     DLGRAFIASAAKALVPGGRLVLVANRHLPYEAAIDAVLADRRLLAEDGAFKVITARSG
                     SACRRSRG"
     gene            complement(2440..3231)
                     /locus_tag="VLL76_06790"
     CDS             complement(2440..3231)
                     /locus_tag="VLL76_06790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29245.1"
                     /translation="MLDLFEADALAAAGVVISTPGHPYPPMPAPPYRPVESRNWKFHA
                     RTFPILPGYFNGPMPVDWTTFLLVRDDVTWMSLVPAEVESQMPHLAAARGTVVVCGLG
                     LGLMAYAVSALKAVDRLVVVERDREVAEMFHDYAQFSAWPQRSKVELVIEDARAFKKA
                     GVDFLYADIWPFYRMDAMVEDMKAMHANIPAPACGYWGQEIDMVDFAVAQGIPVEEFG
                     PEHVRAFASAHGLPLIGMENPNYPELCRRAAVNPAIGGKRIPIER"
     gene            3303..4031
                     /locus_tag="VLL76_06795"
     CDS             3303..4031
                     /locus_tag="VLL76_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013201431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3750 domain-containing protein"
                     /protein_id="HSV29246.1"
                     /translation="MTKWMLLLALVAFIGPLVANAVAGAGRSPLPWYSAPMDAVGLAP
                     DPSRVREAVVQVYAAPAFSWRGIVATHTWIVVKRQGAERLTRYDVVGWGGGDRVKVDW
                     APPDGLWYGKRPMLLLDRRGPEVEALIDGVEAAVRDYPWRHTYRTWPGPNSNTFTAHV
                     AREVPGLRLDLPANALGKDFVPVSRMLTRAPSGTGVQVSLAGILGVMVAAEEGVEVNV
                     LGLSLGLDVLQPAIRLPGIGRFPR"
     gene            4063..4770
                     /locus_tag="VLL76_06800"
     CDS             4063..4770
                     /locus_tag="VLL76_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV29247.1"
                     /translation="MKRGQIESAWLGRAECRSCGIRDLVLFADLTEPDFKLIHLPIDE
                     VQLDAGASLYTGGDDGVAAFTIRSGLVKLVQYLPDGTQRIVRLLRPGAVAGLEVMVGK
                     PYEHTAIAVQPTLVCRLPREVLDRLSRETPRLHRQLMNKWHEALRLADEWLTDLNTGS
                     SRQRVARLVLHLLEGQCGDQVQFLVREDVGAILSITTETASRVVAEFRRSGVLTETAQ
                     NTFACDREALESIANDG"
     gene            complement(4976..>5377)
                     /locus_tag="VLL76_06805"
     CDS             complement(4976..>5377)
                     /locus_tag="VLL76_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29248.1"
                     /translation="ATIYVATSKAFQDWASDVGLGKNVYKIGIAEDQTPDEAVANLCG
                     CSDWKVLKAEDAGELTEAEMMERLARKEKLVDPNYYPRLRGEKAVVKANLTAIENNTL
                     VALALDGREPPKNFKIKPVDVAEYLIRAVVK"
BASE COUNT          809 a         1790 c         1894 g          884 t
ORIGIN      
        1 aaaaggtcgg ccgtctcctc gacctcgtcc accttgccgg ctttgcccgc cgctacccgt
       61 cgcaactgtc cggcgggcag cgccagcgcg tcgcccttgc ccgtgccctg gcggtggaac
      121 cccgcctgtt gctgctggac gagccgttcg gcgcgctgga tgcccaggtg cggaaggatc
      181 tgcggcgctg gctgcggcaa ttgcatgaag aaatgggcct gaccaccgtg ttcgtgaccc
      241 acgaccagga ggaggcgctg gaactggccg acgaggtggt ggtgatgaat cgcggccgga
      301 tcgagcaggt gggcacgccg caggaaatct atgacaaccc ggccaccccg ttcgtcttca
      361 acttcctggg aaacgtcaat cggctggatt gcgatgtgcg ggctggggaa gcccggggcg
      421 ccggctggcg ggcgccggcc gccggcatgg ccgacggccc ctgcgtcgcc tttgtccgcc
      481 cccatgacgt cgaagtcgcc gccgatacgg gtgtcccggc caccatccgc catgtcacgg
      541 tgctggggcc ggtggtgcgt gccgatctcg tattgggtga cgggacggcg gtcgaggccg
      601 agatcagccg ggaagcccat gcgcgcttcg ccctgacgcc gggtcgaaag accgccttgg
      661 cgttccgcaa gatggcggtg tttcccgctt aacggaacac cgcctccact tcctcgggcg
      721 tcagcacccg ccattcgcca ggctgcaaca cgcccagctc cagcccgccg atgcgcgagc
      781 ggtgcagggt ctcgacgcgg ttgccggcgg cggcgaacat gcgtttgacc tggtgatagc
      841 ggccttcgac gatggtcagg cgggcctggc agtcgcccag cacctccagc gaggccggca
      901 gcagcgggtc cttttccgag cgcagcatca gcgtgccgct ggcgaacaaa tcggcctcgg
      961 tgccggccag cgggtcggcc agggtgacat cgtaggtttt ggggatgcgg ctcttgggcg
     1021 agatgatctt gtgcagcagc gcgccgtcgt cggtcagcag cagcaggccg gtagtgtcgc
     1081 ggtccagccg gcccaccggc gcgatcaccg ggttgcggcg ggcgaagcgc ggcggcagca
     1141 attcatagac gacgcggccg ggatcgctgg tcgagcaggt gtagccgtcg ggcttgttga
     1201 gcatcagcac cacgccctgc ggcgggtcca gcgtctcgcc gtccaccatc aggtcgtcgt
     1261 gcgccacttt cgaatcgggc gccagcctgg cgccgtcgcg cgcggtgacg cggccgtcgc
     1321 gcagcagggc gcgcacgtcc ttttggctgc cgtagcccag gttggccaac agccgtacca
     1381 gcctcatgtc cgcaactccg ttggaaagac ggcggattat ggacaaggat cggcgaatgg
     1441 gctaggggga agccatgtcc gacgcactca ccgccctgac ctatcccttc gctgccggcc
     1501 tgttgcccat gccggcgccg gggcggggcg tcttcctgcg cgccgagccg ggcctgggct
     1561 ccgaatggac gccgctgctg gtctgccagc agaccttcaa gcccgccttc gacgcgctga
     1621 cggcccgggg cttccaggtg acgatcgaag catccggcac gttcgatctg gcgctggtgc
     1681 tggtgtccaa gcacaaggca gagacgctcg ccaatatcgc ttcggcctgg tcgctgctgc
     1741 ggcccggcgg gacgctggtt tgcgccggcg gcaacgatgt cggcgccgcc tcgatcctgc
     1801 gcgaagtgaa ggcggcggtc ggagacctgg cgaccgcgtc gaagcatcat tgcaaggtgt
     1861 tctgggcgac gcgcaccgcc gacagcccgc ccgcgatggc gcaatggcac caggccgggc
     1921 ggttgcagcg tgtggcggcc accggctgcc agtcgaggcc cggtatctac aattgggaca
     1981 aggtggacag gggctcggcg ttgctggccg cccatctgcc cgccgacatg gccggccgcg
     2041 tcgccgatct gggcgccggc tggggctatc tggggctgga agtgctgaag gcccggcccg
     2101 gcgtaaccgc gctcgacctg ttcgaggcgg aaaagctggc gttggacgcg gcgcgggcga
     2161 atttcgaggg ggcgcgggtg ccggtcggct tccactggtg cgacgtggcg gcgggagttc
     2221 ccggcggcta cgactgggtg gtgaccaatc cacccttcca tgccggcaag gccaccgacg
     2281 tcgacctcgg ccgcgccttc atcgccagcg ccgccaaggc cttggtgccc ggcggccggt
     2341 tggtgctggt cgccaaccgc catctgcctt acgaggcggc catcgatgcc gtgctggccg
     2401 accgccgcct gctggccgag gacggcgcct tcaaggtcat caccgctcga tcgggatccg
     2461 cttgccgccg atcgcggggt tgaccgcggc gcgccggcac agctcggggt aattggggtt
     2521 ctccattccg atcagcggca ggccgtgggc ggaggcgaag gcgcgcacgt gctcggggcc
     2581 gaattcctcg acggggatgc cttgggccac cgcgaaatcc accatgtcga tctcctggcc
     2641 ccaatagccg caggcggggg cggggatgtt ggcgtgcatg gccttcatgt cctcgaccat
     2701 ggcatccatg cggtagaagg gccagatatc ggcgtagagg aaatcgacgc cagccttctt
     2761 gaaggcgcgg gcgtcctcga tcaccagctc gaccttcgag cgctgcggcc aggcggagaa
     2821 ctgggcatag tcatggaaca tctcggcgac ctcgcggtcg cgctcgacca ccaccagccg
     2881 gtccaccgcc ttcagcgccg acaccgcata ggccatcagg cccaggccca ggccgcacac
     2941 caccaccgtg ccgcgcgctg cggccagatg cggcatctgg ctctcgacct cggcggggac
     3001 cagactcatc caggtgacgt cgtcgcggac cagcaggaac gtggtccagt ccaccggcat
     3061 ggggccgttg aaatagccgg gcaggatggg gaaagtgcgg gcatggaatt tccagtttcg
     3121 gctttccacc ggccgatagg gcggcgccgg catgggcgga taggggtggc ccggggtcga
     3181 gatcaccacc ccggcggcag ccaaagcatc cgcttcaaag agatccagca tcacgtcctc
     3241 cccctctgcg tgccaaccgg tatacgtcat ggagcgccgg ttgaccatcc catggaggcg
     3301 gcatgaccaa gtggatgctg ttgctggcgc tggtggcgtt catcgggccg ctggtcgcca
     3361 acgccgtggc gggggcgggg cggtcgccgc tgccatggta ttcggcgccc atggatgcgg
     3421 tggggctggc acccgatccg agccgggtgc gcgaggcggt ggtgcaggtc tatgcggcac
     3481 cggccttttc ctggcgcggc atcgtcgcca cccacacctg gatcgtggtc aaacgccagg
     3541 gcgccgagcg gctgacgcgc tatgacgtgg tcggctgggg cggcggcgac cgggtcaagg
     3601 tggattgggc gccgccggac gggctgtggt acggcaagcg gccgatgctg ctgctcgacc
     3661 ggcgcggtcc cgaggtcgag gcgctgatcg acggtgtcga ggcggcggtg cgcgactatc
     3721 cctggcgcca tacctatcgc acctggcccg gccccaacag caacaccttc accgcccatg
     3781 tggcgcgcga ggtcccgggc ctgcggctcg atctgccggc caacgcgctg ggcaaggact
     3841 tcgtgccggt gtcgcgcatg ctgacccgcg ctcctagcgg taccggcgtg caagtgtcgc
     3901 tggccggcat cctgggcgtg atggtggcgg ccgaggaagg cgtcgaggtc aacgtgttgg
     3961 ggttgtcgct ggggctggat gtcctgcaac cggcgatacg gctgcccgga atcggccgat
     4021 ttccccggtg acgggggctc cgttcaatgg aataatccgg gcatgaaacg gggacagatc
     4081 gaatcggctt ggttggggcg ggctgaatgc cgcagttgcg gcatccgcga tctcgtgctg
     4141 ttcgctgatc tgaccgagcc cgacttcaag ctgatccacc tgcccatcga cgaggtccaa
     4201 ctcgacgccg gcgccagcct ttataccggc ggcgacgatg gggtggccgc cttcaccatc
     4261 cgctcggggc tggtcaagct ggtgcaatac ctgcccgacg gtacccagcg catcgtccgc
     4321 ctgttgcgcc ccggcgccgt ggccgggctc gaggtgatgg tgggcaagcc ctatgagcac
     4381 acggcgatcg cggtacagcc caccctggtc tgccgcctgc cgcgcgaggt gctggaccgc
     4441 ctcagccgcg agacgcccag gctgcaccgc cagttgatga acaaatggca cgaggcgctg
     4501 cggctggccg acgaatggct gaccgacctc aacaccggct cgtcgcggca gcgcgtcgca
     4561 cgcttggtgc tgcacctgct ggaaggccag tgcggcgacc aggtccagtt cctggtgcgc
     4621 gaggacgtcg gcgccatcct gtccatcacc accgaaaccg ccagccgggt ggtggcggag
     4681 ttcaggcgca gcggcgtgct gaccgaaacg gcgcagaaca ccttcgcctg cgaccgcgaa
     4741 gcgctggaaa gcatcgccaa cgacggctga ggccgggcct ggttggccca tccgccccct
     4801 caccgtcatc cccgcgaagg cggggatcca tggaggcagc gaaaaatgtc ggtgggacaa
     4861 tgggttgagc ggacggaccc atggaccccc gccttcgcgg gggtgacgag tctggggggc
     4921 gagggtcgac gctgaaccgg acagccgtgt gtcacccgga actcggcgct gaaccttatt
     4981 tcaccacggc ccggatcagg tactcggcca catccaccgg cttgatcttg aagttcttgg
     5041 gcggctcccg gccgtccagc gccagcgcca ccaaggtatt gttctcgatg gcggtcaggt
     5101 tggccttgac caccgccttt tcgccgcgca ggcggggata gtagttgggg tcgaccagct
     5161 tttccttgcg cgccagccgc tccatcatct cggcctcggt caactcgccg gcatcctcgg
     5221 ccttcagcac cttccaatcc gagcagccgc acaggttggc gacggcttcg tccggcgtct
     5281 ggtcctcggc gatgccgatc ttgtagacgt tcttgcccag gccgacgtcc gacgcccagt
     5341 cctggaacgc cttgctggtg gcgacataga tggtggc
//
LOCUS       DATIKR010000433         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_236167, whole genome shotgun sequence.
ACCESSION   DATIKR010000433 DATIKR010000000
VERSION     DATIKR010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236167"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VLL76_06810"
     CDS             <1..831
                     /locus_tag="VLL76_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24B family metallopeptidase"
                     /protein_id="HSV29249.1"
                     /translation="RDGAAMVRFLAWLAGQEGTDELQAAARLEEFRAQGEHFKGLSFP
                     TIAGSGPHGAIVHYRSSPRSNRALGSGELFLLDSGAQYLDGTTDVTRTVAIGMPGAEE
                     RHRFTLVLKGHIAVATAIFPVGTTGPQLDILARRALWAEGLDYDHGTGHGVGSYLSVH
                     EGPQRISKAGHATVALKPGMILSNEPGYYKAGAYGIRIENLVAVTPVPAPAGAERELL
                     AFETLTLVPFDRTLIERELLTEAERAWVDAYHARVLAEIGPLVEPSVRAWLAPACAPL
                     "
     gene            992..>1605
                     /locus_tag="VLL76_06815"
     CDS             992..>1605
                     /locus_tag="VLL76_06815"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HSV29250.1"
                     /translation="MMGMGDSKQQTSQGPSGTAARSADSEQKTPARQQYPQGAQTSQA
                     DQGVMQIQRQLGQRGYDVGPVDGLMGESTQSALRNFQRDQGLPTTGQADQQTLAALGM
                     AGGQQQRMSQQQQQQQRQQDYAPMTRRQGAMMEQQPPRAGMGMRQQAAMDPNTVRNIQ
                     QQLDRRGYDVGEVDGIWGPRTSRAVTAFQRDENLNASGRLDQQTL"
BASE COUNT          268 a          593 c          529 g          215 t
ORIGIN      
        1 cgcgacggcg ccgccatggt ccgctttctg gcctggctgg ccgggcagga gggcaccgac
       61 gaattgcagg ccgccgcccg gctggaggaa ttccgggccc agggcgaaca cttcaagggc
      121 ctgtccttcc ccaccatcgc cggctccggc ccccacggcg ccatcgtcca ttaccgctcc
      181 agcccgcgca gcaaccgcgc cctgggctcc ggcgagctgt tcctgctgga ttccggggcg
      241 caatacctgg acggcaccac cgacgtcacc cgcaccgtcg ccatcggcat gccgggcgcc
      301 gaggaacgcc accgcttcac cctggtgctg aaaggccaca ttgccgtcgc caccgccatt
      361 ttccccgtag gcaccaccgg gccgcagctc gacatcctgg cgcggcgcgc gctgtgggcc
      421 gaggggttgg actacgacca cggcaccggc cacggcgtcg gctcgtacct gtcggtgcac
      481 gagggtccgc agcgcatctc gaaggccggc catgccacgg tggcgctgaa gcccggcatg
      541 atcctgtcca acgaaccggg ctattacaaa gccggcgcct acggcatccg catcgagaac
      601 ctggtggcgg tgacgcccgt gcctgccccc gccggcgccg aacgcgagtt gctggcgttc
      661 gagaccctga cgctggtgcc gttcgaccgc actctgatcg agcgcgagct gctgaccgag
      721 gccgagcgcg cctgggtcga tgcctaccat gcccgcgtcc tggccgaaat cggcccgctg
      781 gtcgaaccct ccgtccgcgc gtggctggcc cccgcctgcg ccccgctgtg accccgaagt
      841 cttagccctc cctttccgtg aacgcgatga accgcccggg cgttcgccca tgtggaacgc
      901 gtccccgaca aggaggaaga cgatgatgaa gaggagggca acgcccgtcc tggccagtgc
      961 cgccattgcg ctctcacttg ccggatgcgg catgatgggc atgggcgaca gcaagcagca
     1021 gacttcgcag gggccgagcg gcaccgccgc gcggtcggcc gattccgagc agaaaacgcc
     1081 cgcccgccag caatatcccc agggcgccca gacgtcgcag gcggaccaag gggtgatgca
     1141 gattcagcgc cagttgggtc agcgcggtta cgacgtcggc ccggtcgatg gcctgatggg
     1201 cgagtccacc cagtcggccc tgcgcaactt ccagcgcgac caaggcctgc ccaccaccgg
     1261 tcaggccgac cagcagaccc ttgccgccct gggcatggcc ggcggccagc agcagcgcat
     1321 gtcgcagcag caacagcagc agcagcgcca gcaggattac gcgccgatga cccggcggca
     1381 gggcgctatg atggagcagc agccgccgcg tgccggcatg ggcatgcggc agcaggctgc
     1441 catggacccc aacacggtgc gcaacatcca gcagcaattg gatcggcgcg gctatgacgt
     1501 gggcgaggtc gatggcatct ggggaccgcg caccagccgc gccgtcaccg ccttccagcg
     1561 cgacgagaac ctgaacgcca gcggccggct ggatcagcag accct
//
LOCUS       DATIKR010000434         2083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_163790, whole genome shotgun sequence.
ACCESSION   DATIKR010000434 DATIKR010000000
VERSION     DATIKR010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163790"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..141
                     /locus_tag="VLL76_06820"
     CDS             <1..141
                     /locus_tag="VLL76_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HSV29251.1"
                     /translation="DGPVAMGYVPAAFAAAGTKVKLVVRGKPMDATVVAMPFAPHRYF
                     KS"
     gene            154..531
                     /gene="gcvH"
                     /locus_tag="VLL76_06825"
     CDS             154..531
                     /gene="gcvH"
                     /locus_tag="VLL76_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HSV29252.1"
                     /translation="MMSMLFTKDHEWIKVDGDIGTVGITDYAQHALGDVVFVDLPAAG
                     KAVEKGGEAAVVESVKAASEVYSPVSGEIVEANGALDDQPGLVNESPEGDAWFFKVKL
                     SDASELDGLMDRAAYDEYVQSLD"
     gene            586..1935
                     /gene="gcvPA"
                     /locus_tag="VLL76_06830"
     CDS             586..1935
                     /gene="gcvPA"
                     /locus_tag="VLL76_06830"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HSV29253.1"
                     /translation="MRYLPHTDADRREMLRAIGVTDVDALFRDVPQSARLDKPLDLPR
                     HQGEMEVERAFTRMAMKNLSAGCAPFFIGAGVYRHHIPASVDQLLLRGEFLTSYTPYQ
                     PEVSQGTLQYLFEFQTQVALLTGMDVANASMYDGATACAEAAVMACRVTKRKKVILSG
                     GLHPHYRSTTETTLKYTDMSTEVLAPDPLGVEDLIGRIDSQTACVIVQNPGFFGGVKD
                     LTPLAEACHADGALLVVAVTDPVSLGLIAPPGAMGADILVGEGQSLGVGLSFGGPGLG
                     LFATKDKYVRQMPGRLAGQTVDQDGKRGFVLTLSTREQHIRREKATSNICTNSGLCAL
                     AFTIHLTLLGETGLGRLAETNHANAVRLEQKLKRVKAARVVSKSYFNEFAVHLGDETD
                     AAEVVDRLADKGVLGGVPASRFYPDYPELKPVLILAATETNTESDMDALVAALEEIL"
BASE COUNT          341 a          729 c          685 g          328 t
ORIGIN      
        1 gacggcccgg tcgccatggg ctacgtgccc gccgccttcg ccgccgccgg aaccaaggtc
       61 aagcttgtcg tgcgcggcaa gccgatggac gccaccgtgg tcgcgatgcc cttcgcgccg
      121 caccgttact tcaagtcgta aggggagttt ccgatcatga gcatgctctt caccaaggac
      181 catgagtgga tcaaggtcga tggcgacatc ggcaccgtcg gcatcaccga ctatgcccag
      241 cacgctttgg gcgacgtggt gttcgtcgac ctgccggccg ccggcaaggc ggtggaaaag
      301 ggcggcgagg ccgccgtggt cgaatcggtc aaggccgcgt cggaggtcta ttcgccggtg
      361 tcgggcgaga tcgtcgaggc caacggcgcg ctcgacgacc agcccggcct ggtcaacgaa
      421 agccccgagg gcgacgcctg gttcttcaag gtcaagctgt ccgatgcctc ggagctggac
      481 ggcctgatgg accgcgccgc ctatgacgaa tacgtgcagt cgctggactg agagaattgc
      541 ccctcgcccg catgcgggcg aggggcgcca agacaggatg atgtgatgcg ctacctgccc
      601 catacggatg ccgaccgccg cgagatgctg cgggccatcg gcgtgacgga cgtcgatgcc
      661 ctgttccgcg acgtgccgca atcggcccgc ctggacaagc cgctggacct gccccgccac
      721 cagggcgaga tggaggtcga gcgggccttc acccgcatgg ccatgaagaa cctgtcggcg
      781 ggctgcgcgc ccttcttcat cggggcgggc gtctatcgcc atcacatccc cgcctcggtg
      841 gaccagttgc tgctgcgcgg cgagttcctg acctcgtaca cgccctatca gcccgaggtc
      901 agccagggca cgctgcaata cctgttcgag ttccagaccc aggtcgcgct gctgaccggc
      961 atggatgtcg ccaacgcctc gatgtacgac ggcgccaccg cctgcgccga ggccgccgtc
     1021 atggcctgcc gcgtcaccaa gcgcaagaag gtgatcctgt cgggcgggct gcatccgcat
     1081 taccgcagca ccaccgagac cacccttaaa tacaccgaca tgagcaccga ggtgctggcc
     1141 cccgacccgc tgggcgtcga ggatctgatc ggccgcatcg acagccagac cgcctgcgtc
     1201 atcgtccaga atcccggctt cttcggcggc gtcaaggacc tgaccccgct ggccgaggcc
     1261 tgccatgccg acggcgccct gctggtggtg gcggtgaccg acccggtgtc cttgggcctg
     1321 atcgcgccgc ccggcgccat gggcgccgac atcttggtgg gcgagggcca gtcgctgggc
     1381 gtcggcctgt ccttcggcgg ccccggcctg ggcctgttcg ccaccaagga caagtatgtg
     1441 cgccagatgc ccggccgcct ggccggccag accgtggacc aggacggcaa gcgtggcttc
     1501 gtgctgaccc tgtccacccg cgagcagcat atccgccgcg agaaggcgac gtcgaacatc
     1561 tgcaccaatt ccggcctgtg cgcgctggcc ttcaccatcc acctgacgct gctgggcgag
     1621 accggcctgg gccgcctggc cgaaaccaac cacgccaatg cggtgcggct ggaacagaag
     1681 ctgaagcgcg tcaaggcggc ccgggtggtg tcgaaatcct atttcaacga attcgccgtg
     1741 catctgggtg acgagaccga cgccgccgag gtggtggacc gcctggccga caagggcgtg
     1801 ctgggcggcg tgcccgcttc gcgcttctat cccgactacc ccgagctgaa acccgttctg
     1861 atcctggccg cgaccgagac caacaccgag tccgacatgg acgccctggt cgccgccctg
     1921 gaggagattc tctgatggcc gacatcacca ccatttccgg caaccgcggc ctgatgatcg
     1981 aggagccgct gatcttcgaa ctgggttccg acggccgcgt cggcgtggac ctgcccgacc
     2041 ccgcgccggt ggacgaggac cgcctggccg gctgccgccg cca
//
LOCUS       DATIKR010000435         2940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79501, whole genome shotgun sequence.
ACCESSION   DATIKR010000435 DATIKR010000000
VERSION     DATIKR010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79501"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VLL76_06835"
     CDS             <1..888
                     /locus_tag="VLL76_06835"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV29254.1"
                     /translation="AVMAGRFSPVVIEVSPIAQEKGIILLDPWASADGIIDDRRKPNW
                     VFRLSLRDEFAMPAMLAHARSQGIRKVGLLLANTAWGRSNLASAERAGGRFPDIQVVG
                     KAWFNWGETSLLPQYKHLVAQGAKAILFVTNDVEGALLVREMAALPPAERVPLFFHWG
                     ITGGTFVEQTQGALTAIDHAVVQTFSFAKADPAMVERVMATTGPLFGLSRPDQIEAPV
                     GFAHAYDLTHILAKAIALAGSTDRAQVRDALEKVRDHKGLVRFFPQPFTPSRHEALGP
                     DEVFLARFRADGALVPLGR"
     gene            890..>2940
                     /locus_tag="VLL76_06840"
     CDS             890..>2940
                     /locus_tag="VLL76_06840"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29255.1"
                     /translation="MESLTTRVALAGGFVATVLVAAVGSMSFVALSNQIKENIQTATR
                     FSAEIEARQLAGSINGIASHQLSTARNSLIANALTDAMGRDAYVKPFLVDLHEVNGVP
                     LTVTMTDHGGRSLATTLAGEQQASIVELARRAIHDGHQVGGLVEQAAGRPHLVFATPI
                     IYANTGTFEGALVYELDLPDPSPLRGTGDLLSSFEIGIDRQPAAAPSRWGRVVVSEPL
                     PGGLWLTVAAEADETRLSRPLTRLLWNTAWIGAICLALTVVGSRVIAKVVTRRLRQLE
                     FDATRVVEAGSFSDRFVVTGGDEVSRLAKSFNAVLDRLETAHKDIARQGELRLRDSEA
                     RYRLLAEYASDVIARIGADGVIRYVSPAVIRTYGHQPADMAGSRVVDYVHPEDRRAVV
                     EGLELAGRGEVKELIFRLRGADGTWNWVEASAHVVPNGDSDAGLVAILRDIRKRRMVE
                     AALADKTHELERSNAELEQFAYVASHDLREPLRMVTSYLQLIARKLGSGADEETACFL
                     AFATDGAKRMDRLILDMLEFSRVGRNRRPDETTRLDEVLAAAASSFLSASPDAVVLPA
                     TDAEVVGDRQELARLFQNLIGNGIKYRPADRPPRIVVTVAADAGEVVVSVADNGIGIA
                     QEHFERIFQIFQRLHGREEFEGTGIGLAICKKIVDRHRGRIWLDSVPGQGTTFHVALP
                     A"
BASE COUNT          454 a         1008 c          992 g          486 t
ORIGIN      
        1 gcggtgatgg ccggccgttt cagcccggtg gtcatcgagg tttcccccat cgcccaggaa
       61 aagggcatca tcctgctcga cccgtgggct tcggccgacg gaatcatcga cgaccggcgc
      121 aagcccaact gggtgttccg cctgtcgttg cgcgacgaat tcgccatgcc ggccatgctg
      181 gcgcacgccc gttcccaggg catccgcaag gtcgggctgc tgctcgccaa caccgcctgg
      241 ggccgcagca acctggcctc ggccgagcgc gcaggcggcc gtttccccga cattcaggtc
      301 gtcggcaagg cctggttcaa ttggggtgaa accagcctgt tgccgcaata caagcatttg
      361 gtggcccaag gcgccaaggc catcctgttc gtcaccaacg acgtcgaggg cgccctgctg
      421 gtgcgtgaaa tggctgcgct gccgccggcc gaacgggtgc cgctgttctt ccactggggc
      481 atcaccggcg gcaccttcgt cgagcagacc caaggggcgc tgacggccat cgaccacgcg
      541 gtggtgcaga ccttcagctt cgccaaggcc gacccggcca tggtggaaag ggtgatggcg
      601 acgaccgggc cgctgttcgg attgtcccgc cccgaccaga tcgaggcccc ggtcggtttc
      661 gcccatgcct acgacctgac ccacatcctg gccaaggcca tcgcccttgc gggcagcacc
      721 gatcgcgccc aggtccgcga cgcgctcgag aaggtgcgcg accacaaggg cctggtgcgg
      781 ttcttcccgc agcccttcac gccctcgcgg cacgaggcgc tgggaccgga cgaggtcttc
      841 ctggccagat tccgcgcgga cggcgcgctg gttcccttgg ggcgctgacg tggagagcct
      901 gacgacacgg gtggctttgg cgggcggctt cgttgccacc gtgctggtgg ctgccgtggg
      961 gtcgatgtcg ttcgtggcgc tcagcaatca gatcaaggaa aacatccaga cggccacccg
     1021 cttcagcgcc gagatcgagg cgcgccaact ggccggctcg atcaacggca tcgcgtcgca
     1081 tcaattgtcg accgcgcgca attcgctgat cgccaacgcg ctgaccgacg ccatggggcg
     1141 cgacgcctac gtcaagccgt tcctggtcga tctgcacgag gtcaacggcg tgccgctgac
     1201 cgtcaccatg accgaccatg gcggccggtc gttggcgacc actcttgccg gtgaacaaca
     1261 ggccagcatt gtcgagctgg cacgtcgggc catccacgac ggccaccagg tcggcgggct
     1321 ggtggagcag gcggcggggc gcccccatct ggtgttcgcc actcccatca tctacgccaa
     1381 caccggcacg ttcgagggcg ccctggtcta tgagctggac ctgccggacc cttcgcccct
     1441 gcgcggaacc ggcgacctgt tgtccagctt cgaaatcggc atcgaccgcc agccggcggc
     1501 ggcgccgtcg cgttggggcc gcgtggtggt ttcggaaccg ctcccgggag ggttgtggtt
     1561 gaccgtggcc gccgaggccg acgaaacccg cctgtcgcgc ccgctgaccc gcctgctgtg
     1621 gaacaccgca tggatcggtg ccatctgcct ggcgctgacc gtggtcggca gccgggtcat
     1681 cgccaaggtg gtgacgcgcc ggctgcgcca gcttgagttc gacgccaccc gcgtggtcga
     1741 ggccgggtcc ttctcggatc gcttcgtggt gaccggcggc gacgaggtct cgcgcttggc
     1801 gaagtcgttc aacgcggtac tggaccgtct ggaaaccgcc cacaaggaca tcgcccggca
     1861 gggcgaattg cggctgcggg attccgaggc acgttaccgg ctgctggcgg aatacgcatc
     1921 ggacgtcatc gcccgcatcg gcgccgacgg cgtcatccgc tacgtctcgc cggcggtcat
     1981 ccgcacctat ggtcaccagc ccgccgacat ggcggggtcg agggtagtgg actacgtcca
     2041 ccccgaagac cgccgggcgg tggtcgaggg gctggagttg gccggtcggg gcgaggtcaa
     2101 ggaactgatt ttccgcctgc gtggtgcgga cggcacctgg aactgggtcg aggcttcggc
     2161 ccatgtggtg cccaatggcg attccgacgc cggcctggtc gccatcctgc gcgacatccg
     2221 caagcggcgg atggtcgagg cggccttggc cgacaagacc cacgagctgg agcgttccaa
     2281 cgccgagctg gagcagttcg cctatgtggc gtcccacgac ctgcgcgaac cgttgcggat
     2341 ggtgaccagc tatctgcagc tgatcgcgcg taaactgggg tccggcgccg acgaggaaac
     2401 ggcctgtttc ctggcgtttg cgaccgatgg cgccaagcgg atggatcgcc tgatcctgga
     2461 catgctagaa ttctcccgcg tcggccgcaa ccggcggccg gacgaaacca cgcgtctcga
     2521 cgaggtgctg gccgccgccg ccagttcgtt cctctcggcc tcgcccgacg cggtggtcct
     2581 gccggccacc gacgcagagg tcgtcggcga ccgccaggaa ctggcacggc tgttccagaa
     2641 cctgatcggc aacggcatca agtatcgccc cgccgaccgc ccgccccgga tcgtcgtcac
     2701 ggtcgccgcc gatgccggcg aggtcgtggt gtcggtggcc gacaacggca tcggcatcgc
     2761 ccaggagcat ttcgaacgca tcttccagat cttccagcgc ctgcacgggc gcgaggaatt
     2821 cgagggaacc ggcatcggcc tggcgatctg caagaagatc gtcgatcgcc accgcggccg
     2881 catctggctc gattcggtgc ccggccaggg caccaccttc catgtggcgc tgccggctat
//
LOCUS       DATIKR010000436         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_54610, whole genome shotgun sequence.
ACCESSION   DATIKR010000436 DATIKR010000000
VERSION     DATIKR010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54610"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..461
                     /locus_tag="VLL76_06845"
     CDS             105..461
                     /locus_tag="VLL76_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HSV29256.1"
                     /translation="MTRRDLDLVHIRQLLTDRLAEVERLELMEHEAARPVELDQQSVG
                     RLSRMDALQMQAMAAEHERRFKAEHHRIIAALQRLEAGEYGYCLSCEAKIPAKRLELD
                     PSVTLCVKCAEAAGHH"
     gene            533..>1689
                     /locus_tag="VLL76_06850"
     CDS             533..>1689
                     /locus_tag="VLL76_06850"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HSV29257.1"
                     /translation="MKGEVKKVVLAYSGGLDTSIILRWLQDTYQCEVVTFTADLGQGE
                     ELEPARKKAQLMGIKDENIFIDDLREEFVRDFVFPMFRANALYEGVYLLGTSIARPLI
                     SKRQIEIANQVGADAVSHGATGKGNDQVRFEMGYYALKPEIKVIAPWRLWDLTSRTKL
                     LDFAEKHQIPIAKDKRGEAPYSTDANLLHISYEGKALEDPWVEPDEDMFTRSVSPEKA
                     PDKPTYVEIQFERGDAVAIDSVRMAPAQVLTKLNELGGANGIGRLDLVENRFVGMKSR
                     GVYETPGGSVLIVAHRAMESITLDRGEAHLKDDIMPRYAELIYNGFWFSPERIALQQM
                     IDHISQNVSGVVRLKLYKGNVTVVGRKSERSLYRLDYVTFEEDSVYDQRDA"
BASE COUNT          324 a          580 c          520 g          265 t
ORIGIN      
        1 ccatccgccc agtcatgccg tttgcgcatg ccggacgacc atgagaacgg attggggctg
       61 tgccgtcccg gcgttaaaat cgttcatcag gtaaggagac gccgatgacc cgccgcgatc
      121 tcgaccttgt ccacattcgc caattgctga ccgaccgcct ggccgaggtc gagcgcctgg
      181 agctcatgga gcacgaggcg gcccggccag tcgagctgga ccagcagagc gtcggccgat
      241 tgtcgcgcat ggacgccctg cagatgcagg ccatggcggc cgagcacgag cgccgcttca
      301 aggccgaaca ccaccgcatc atcgccgccc tgcagcggct ggaggccggc gaatacggct
      361 attgtctgtc ctgcgaggcc aagatcccgg ccaagcgcct ggagctggac ccgtccgtca
      421 ccctgtgcgt caaatgcgcc gaggcggccg ggcaccactg aggcttgccg cattgcgcca
      481 atcgcctata cttcgcccct tcggttccat acctgtttaa gggcgttttc ccatgaaggg
      541 cgaagtcaag aaggttgtgc tggcctattc gggcggcctc gatacctcga tcatcctgcg
      601 ctggctgcag gacacctatc agtgcgaggt ggtgaccttc accgccgacc tcggccaggg
      661 cgaggagctt gagcccgccc gcaagaaggc ccaactgatg ggcatcaagg acgagaacat
      721 cttcatcgac gacctgcgcg aggaattcgt gcgggacttc gtgttcccga tgttccgcgc
      781 caacgccctg tacgagggcg tctacctgct cggcacctcg atcgcccggc cgctgatctc
      841 gaagcgccag atcgagatcg ccaaccaggt cggcgccgac gcggtttcgc acggcgccac
      901 cggcaagggc aacgaccagg tccgcttcga gatgggctat tacgccctca agcccgagat
      961 caaggtcatc gcgccgtggc gcctgtggga cctgaccagc cgcaccaagc tgctggactt
     1021 cgccgaaaag caccagatcc ccatcgccaa ggacaagcgc ggcgaggcgc cgtattccac
     1081 cgacgccaac ctgctgcaca tctcgtatga gggcaaggcg ctggaagacc cgtgggtcga
     1141 gcccgacgag gacatgttca cccgctcggt cagcccggag aaggcccccg acaagccgac
     1201 ctatgtggag atccagttcg agcgcggcga cgccgtcgcc atcgacagcg tgcgcatggc
     1261 cccggcacag gtgctgacca agctgaacga gctgggcggc gccaacggca tcggccgcct
     1321 ggacctggtg gaaaaccgct tcgtcggcat gaagagccgc ggcgtctacg agacccccgg
     1381 cggctcggtc ctgatcgtcg cccaccgcgc catggagagc atcacgctcg accgtggcga
     1441 ggcgcacctc aaggacgaca tcatgccgcg ctacgccgag ctgatctaca acggcttctg
     1501 gttcagcccc gagcgcatcg ccctgcagca gatgatcgac cacatcagcc agaacgtctc
     1561 cggcgtggtc cgcctgaagc tgtacaaggg caacgtcacc gtcgtcggcc gcaagtccga
     1621 gcgcagcctg taccgcctcg attatgtgac cttcgaggaa gacagcgtct acgaccagcg
     1681 cgacgccca
//
LOCUS       DATIKR010000437         3574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_200069, whole genome shotgun sequence.
ACCESSION   DATIKR010000437 DATIKR010000000
VERSION     DATIKR010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200069"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..3265
                     /gene="carB"
                     /locus_tag="VLL76_06855"
     CDS             14..3265
                     /gene="carB"
                     /locus_tag="VLL76_06855"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HSV29258.1"
                     /translation="MPKRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKEEGYRV
                     ILVNSNPATIMTDPGLADATYIEPITPAMVTKIIEKERPDALLPTMGGQTALNTAMAL
                     ADQGVLEKYGVEMIAAKRDVIAKAEDRLLFRDAMDKIGLESPKSKVVKTLQEARDALD
                     FIGLPAIIRPSFTLAGTGGGIAYNIEEYEQIVAGGLAASPVHEVLVEESVLGWKEYEM
                     EVVRDKKDNCIIICSIENIDPMGVHTGDSITVAPALTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPKTGRMTVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LANDITGVTPASFEPTIDYVVTKIPRFTFEKFPGADPNLTTSMKSVGEAMAIGRTFQE
                     SLQKGLRSMETGLTGLNEVEIPGASAADMKDAVKKALATPRHDRLLVIAQAFRLGLTV
                     DEVHGACSYDHWFLKQIKAIVDAEEEVRKNGLPIDAAGMLRLKKMGFSDLRLSQLSGK
                     TPTETAFRREVLNVKPVYKRIDTCAAEFPSSTAYMYSCYEGDGVNPADCESAPSDREK
                     VIILGGGPNRIGQGIEFDYCCVHAAYALDEAGRETIMVNCNPETVSTDYDTSDRLYFE
                     PLTAETVIDLVRKEQSNGKVLGCIVQFGGQTPLKLAHALEQAQIPILGTSPDMIDLAE
                     DRERFQRLLHDLGLKQPPNGTARSLEEAKAIAERIGYPVVIRPSFVLGGRAMQIVYDH
                     EALERYMREAVVVSGDDPVLIDFYLKDAIEVDVDALADGKDVYVAGIMQHIEEAGIHS
                     GDSACSLPPYSLDAATVAELERQTVMLAKALNVVGLMNVQYAVQGGTIYILEVNPRAS
                     RTVPFVAKATGIPIAKIAARVMAGETLASFNIKKPDFKHVAVKEAVFPFARFPGVDIL
                     LGPEMKSTGEVMGIDADFARAFAKSQLAAGTVLPTEGCVFISVREGDKPAMVEVGKRL
                     LDMGFCLIATEGTAKFLSERGLKVSVVNKVLEGRPHCVDAMMNGQVQLVVNTTEGSVA
                     VKDSFSIRRTALQMNIPHYTTVAGARAAVDAIAAMRSGKLDVAPLQSYFNGSF"
     gene            3333..>3574
                     /gene="greA"
                     /locus_tag="VLL76_06860"
     CDS             3333..>3574
                     /gene="greA"
                     /locus_tag="VLL76_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HSV29259.1"
                     /translation="MEKIPMTPPGLAQLEEELKTLKSVERPAVIKAIAEAREHGDLSE
                     NAEYHAARERQSFIEGRVAELEDIISRAQVIDVTQLS"
BASE COUNT          669 a         1207 c         1140 g          558 t
ORIGIN      
        1 cctgagtgag ccgatgccca aacgtacaga catcaagtcc atcctcatca tcggcgccgg
       61 tccgatcgtc atcggtcagg cctgcgagtt cgactattcg ggcgtgcagg cgtgcaaggc
      121 gctgaaggag gagggctacc gggtcatcct ggtgaactcc aacccggcca ccatcatgac
      181 cgacccgggc ctggccgacg cgacctacat cgagccgatc accccggcca tggtcaccaa
      241 gatcatcgag aaggagcgac ccgacgcgct gttgcccacc atgggcggcc agaccgcgct
      301 caacaccgcc atggcgctgg ccgaccaggg cgtgctcgag aagtacggcg tcgagatgat
      361 cgcggccaag cgcgacgtca tcgccaaggc ggaagaccgc ctgctgttcc gggacgccat
      421 ggacaagatc ggcctggaaa gccccaagtc gaaagtcgtc aagacgctgc aggaggcgcg
      481 cgacgcgctc gatttcatcg gcctgcccgc catcatccgc cccagcttca cgctggccgg
      541 caccggcggc ggcatcgcct acaacatcga ggaatacgag cagatcgttg ccggcggcct
      601 ggcggcctcg ccggtgcacg aagtgctggt cgaggaatcg gtgctgggct ggaaagagta
      661 tgagatggag gttgtccgcg acaagaagga caactgcatc atcatctgct cgatcgagaa
      721 catcgacccc atgggcgtgc acaccggcga ctcgatcacg gtggcgccgg ccctgacgct
      781 gaccgacaag gaataccaga tcatgcgcaa cgcctcgctg gcggtgctgc gcgagatcgg
      841 cgtcgatacc ggcggttcca acgtccagtt cgcggtcaac cccaagaccg gccgcatgac
      901 cgtcatcgag atgaacccgc gcgtgtcgcg ttcgtcggcg ctggcgtcca aggccaccgg
      961 cttccccatc gccaaggtgg cggccaagct ggcggtcggc tacacgctcg acgagttggc
     1021 caacgacatc accggcgtca ccccggcgtc gttcgagccg accatcgact acgtggtcac
     1081 caagattccg cgcttcacct tcgagaagtt cccgggcgcc gaccccaacc tcaccacgtc
     1141 catgaagtcg gtgggcgagg ccatggccat cggccgcacc ttccaggaat cgctccagaa
     1201 gggcctgcgc tccatggaga ccggcctgac cggcctcaac gaggtcgaga tccccggcgc
     1261 ctccgccgcc gacatgaagg acgcggtcaa gaaggcgctg gcgaccccgc gccatgaccg
     1321 cctgctggtc atcgcccagg ccttccgcct gggcctgacg gtggacgaag tgcacggcgc
     1381 ctgctcgtac gaccattggt tcctgaagca gatcaaggcc atcgtcgatg ccgaggagga
     1441 ggtccgcaag aacggcctgc ccatcgacgc cgccggcatg ctgcgcctga agaagatggg
     1501 gttctcggac ctgcgcctgt cgcaattgtc gggcaagacc ccgaccgaga ccgcgttccg
     1561 ccgcgaggtg ctgaacgtca agccggtcta caagcgcatc gacacctgcg ccgccgagtt
     1621 cccgtcgtcc accgcctaca tgtattcgtg ctacgagggc gacggcgtca acccggccga
     1681 ttgcgaatcg gcgccgtccg accgcgagaa ggtgatcatc ctgggtggcg gtccgaaccg
     1741 catcggccag ggcatcgagt tcgactattg ctgcgtccac gccgcctatg ccttggatga
     1801 ggccggccgc gagaccatca tggtcaactg caatcccgag accgtgtcca ccgattacga
     1861 cacctcggat cgcctgtatt tcgagccgct gaccgccgag acggtgatcg acctggtccg
     1921 caaggagcag agcaacggca aggtgctggg ctgcatcgtc cagttcggcg gccagacccc
     1981 gctgaagctg gcgcacgcgc tggagcaggc gcagattccg atcctgggca ccagccccga
     2041 catgatcgac ctggccgagg accgcgagcg cttccagcgc ctgctgcacg acctgggcct
     2101 gaagcagccg ccgaacggca ccgcccgctc gctggaagag gccaaggcca tcgccgagcg
     2161 catcggctat ccggtggtga tccgccccag cttcgtgctg ggcggccgcg ccatgcagat
     2221 cgtctacgac cacgaggcgc tcgagcgcta catgcgcgag gcggtggtgg tgtcgggcga
     2281 cgatccggtg ctgatcgact tctacctcaa ggacgccatc gaggtggacg tcgacgccct
     2341 ggccgacggc aaggacgtct atgtcgccgg catcatgcag cacatcgagg aagccggcat
     2401 ccactcgggc gactcggcct gctcgctgcc gccctattcg ctggatgccg ccaccgtcgc
     2461 cgagctggag cgccagacgg tgatgctggc caaggcgctg aacgtcgtcg gcctgatgaa
     2521 cgtgcagtat gccgtccagg gcggcaccat ctacattctc gaggtcaacc cgcgcgcctc
     2581 gcgcaccgtg ccgttcgtcg ccaaggccac cggcatcccc atcgccaaga tcgccgcccg
     2641 cgtcatggcc ggcgaaaccc tggccagctt caacatcaag aagccggact tcaagcatgt
     2701 ggcggtcaag gaagcggtgt tcccgttcgc ccgcttcccc ggcgtcgaca tcctgttggg
     2761 cccggaaatg aagtcgaccg gcgaggtcat gggcatcgac gccgacttcg cccgtgcctt
     2821 cgccaagagc cagcttgccg ccggcaccgt gctgccgacc gaaggctgcg tcttcatctc
     2881 ggtgcgcgaa ggcgacaagc cggccatggt cgaggtgggc aagcgcctgc tcgacatggg
     2941 cttctgcctg atcgccaccg aaggcaccgc caagttcctg tcggaacgcg gcctcaaggt
     3001 gtcggtggtc aacaaggtgc tggagggccg gccccattgc gtcgacgcca tgatgaacgg
     3061 ccaggtgcaa ctggtggtca acacgacgga gggcagcgtc gccgtcaagg atagcttctc
     3121 gatccgccgc acggcgctgc agatgaacat cccgcactac accacggtgg ccggtgcgcg
     3181 cgccgcggtt gacgcaatcg cggccatgcg gagcggcaag cttgatgtgg cgccgctgca
     3241 atcgtatttt aatggttctt tctaagaggc ggaaaggccg cgcgggggga ccgcgcggcc
     3301 tttgagcgcc ctgaacggtg gggtttctca cgatggaaaa gatcccgatg actcctccgg
     3361 gcctggccca gttggaggag gaattgaaga ctctcaagtc cgtggagcgc ccggcggtga
     3421 tcaaggcgat cgccgaagcg cgcgagcatg gcgacttgtc ggaaaatgcc gagtaccacg
     3481 ccgcccgtga acgccagtcc ttcatcgaag gccgcgtcgc ggaactcgag gacatcatca
     3541 gccgcgccca ggtgatcgac gtcacccaat tgtc
//
LOCUS       DATIKR010000438         1799 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_91414, whole genome shotgun sequence.
ACCESSION   DATIKR010000438 DATIKR010000000
VERSION     DATIKR010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91414"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="VLL76_06865"
     CDS             complement(<1..793)
                     /locus_tag="VLL76_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29260.1"
                     /translation="MADKAQVVAADQQGQFKIDLPRSAIDRIDVVDVDFVLQTKSGQR
                     LIIPGAAMEAMSSKAPPIHFADGPISSADLLAAVEKVETPATSIPVMASLTEYEMKKS
                     EGNKKTMRDGPEGQQQEAQNAQNKQVAPLQTEGQGSTVDKLVDKADDIDAAIRKGAFD
                     PAPIKPYEPPSSNPDAPGSAPPTAKIPLLMSLNEGNTVDFDDSGVTGRGGKVILGGGG
                     PTGSGVDSGILPGDALQYATEVLTGTAGGDDIYADGFNGLGARANT"
     gene            complement(806..>1799)
                     /locus_tag="VLL76_06870"
     CDS             complement(806..>1799)
                     /locus_tag="VLL76_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29261.1"
                     /translation="ELTERIRGPVASVGSVSMPRSGGVSEAFLTDFMAELMSNINDLQ
                     DLFHRSQDASLQLSNRVDGLAQRLELVSQAIESNVAAVKKTNDLLGFGPRMKETNEQM
                     LAELRGIQQNSGDQQKISSRLVDVLNAIDQKLSVGNDTQRLYQDTASTVGRDTVSKLD
                     EAVGLLHSVNDRGADYESKLDRKLQALATTTTNMANGLQALTAKLGEVATIGQGQLQA
                     AGTVQQMLRDSGAETVGALKDLGERIKKVEDVDIGATRHLFEIKEGFNAMASSLESLD
                     QIAQGINRQTSVLEVTLEEMRTSQRNMARDMQKQLREVARDAAREAMASAANMG"
BASE COUNT          233 a          585 c          613 g          368 t
ORIGIN      
        1 cggtgttggc gcgggcaccc aacccgttga agccgtcggc atagatatcg tcgccgccgg
       61 cggtgccggt cagcacctcg gtggcgtatt gcagcgcgtc gccgggcagg atgcccgagt
      121 ccacgccgct gccggtgggg ccgccgccgc ccaggatgac cttgccgcct cgcccggtga
      181 ccccgctgtc gtcgaaatcc accgtgttgc cttcgttgag cgacatcagc agagggatct
      241 tggcggtggg cggcgcgctg ccgggggcgt cggggttcga ggacggaggc tcatagggct
      301 tgatcggcgc cgggtcgaag gcacccttgc ggatggccgc gtcgatgtcg tccgccttgt
      361 cgaccagctt gtcgacggtc gatccctgcc cttcggtctg aagcggcgcg acctgcttgt
      421 tctgggcgtt ctgtgcttcc tgctgctggc cctcggggcc gtcgcgcatc gtcttcttgt
      481 tgccctcgga ctttttcatc tcgtattcgg tcaggctggc catgaccgga atcgaggtcg
      541 cgggggtctc caccttttcc accgccgcca gcaggtcggc cgagctgatc ggaccgtcgg
      601 cgaaatggat gggcggcgcc ttgctgctca tggcttccat ggcggcgccc gggatgatca
      661 ggcgctggcc gctcttggtc tgcagcacga agtccacgtc gaccacgtcg atgcggtcga
      721 tggccgaacg cggcaggtcg atcttgaact gcccctgctg gtcggcggcg acgacttgag
      781 ccttgtcagc catgcttcag cccccctatc ccatgttcgc cgcggatgcc atcgcttcgc
      841 gggcggcgtc gcgggcgacc tcgcgcaatt gcttttgcat gtcgcgcgcc atgttgcgct
      901 ggctggtgcg catctcttcc agggtgactt ccagcaccga ggtctggcgg ttgatgccct
      961 gggcgatctg gtcgagggat tccagcgacg acgccatggc gttgaagcct tccttgatct
     1021 cgaacagatg gcgggtggcg ccgatgtcca cgtcctcgac cttcttgatg cgctcgccca
     1081 gatccttgag cgcgcccacc gtctcggccc ccgagtcgcg cagcatctgc tgcaccgtgc
     1141 cggcggcctg gagctggccc tggccgatgg tggcgacctc gcccagcttg gcggtcagcg
     1201 cctgcaggcc gttggccatg ttggtggtgg tggtcgcaag ggcctggagc ttgcggtcca
     1261 gcttggattc gtaatcggcg ccgcgatcgt tgaccgaatg cagcaggccg accgcctcgt
     1321 ccagcttgga cacggtgtcg cggccgacgg tggaggcggt gtcctggtac aggcgctggg
     1381 tgtcgttgcc gacgctcagc ttctggtcga tggcgttgag cacgtccacc aggcgggacg
     1441 agatcttctg ctggtcgccc gagttctgct ggatgccgcg cagttcggcc agcatctgtt
     1501 cgttggtctc cttcatgcgc gggccgaagc ccagcagatc gttggtcttc ttgaccgccg
     1561 ccacgttgct ttcgatcgcc tgcgacacca gttccaggcg ctgcgccaga ccgtccacac
     1621 ggttggaaag ctgcagcgag gcgtcctgcg agcgatggaa cagatcctgc aggtcgttga
     1681 tgttgctcat caactcggcc atgaagtcgg tcaggaaggc ttccgacacg ccgccgctgc
     1741 gcggcatcga cacggaaccg acgctggcga cggggccacg gatgcgctcg gtcagctcg
//
LOCUS       DATIKR010000439         1984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_103307, whole genome shotgun sequence.
ACCESSION   DATIKR010000439 DATIKR010000000
VERSION     DATIKR010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103307"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..926)
                     /locus_tag="VLL76_06875"
     CDS             complement(<1..926)
                     /locus_tag="VLL76_06875"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HSV29262.1"
                     /translation="MPQKKPLVVVTRKLPDVIETRMMELFDTRLNLDDKPLSKTELIE
                     AVKTADVLVPTITDRIDAAIMAQAGPQLKLIANFGTGVDHIDLATARQRGVTVTNTPG
                     VLTEDTADMTMALILAVPRRLAEGERLMRSGEWSGWSPTHMLGHRIWGKRLGIIGMGR
                     IGQAVARRAKAFGMSIHYHNRKRVHPDIETELEATYWESLDQMLARMDVVTVHCPHTP
                     GTFHLLSARRLALLQKHAYVINTARGEVIDENALTRMLTKGELAGAGLDVFEHEPAVN
                     PKLIALDNVVLLPHMGSATLEGRIDMGEKVII"
     gene            1103..1579
                     /locus_tag="VLL76_06880"
     CDS             1103..1579
                     /locus_tag="VLL76_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSV29263.1"
                     /translation="MFGLLLLVGGLPARAGETSGLPLPRFVSLRSDEVNVRTGPGVRY
                     PIDWIYARKDLPVEVIAEFEAWRKIRDWQGTEGWVHQSMLSGRRMMVVIGTPRSLRNS
                     DADSADPVAIVEPGVTGRILQCPRNRDFCRIEVGNQAQGWLRRDEMWGVYKGEWIE"
     gene            1648..1926
                     /locus_tag="VLL76_06885"
     CDS             1648..1926
                     /locus_tag="VLL76_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29264.1"
                     /translation="MAGGGAMNDNFHGYNDNLSEANNAELGPDGIDLILPALAEGIAA
                     SATDADEALELCRDAAQSENLDEEQFLALVRMVEDITDWELPGPGDDF"
BASE COUNT          309 a          647 c          670 g          358 t
ORIGIN      
        1 ttgatgatga ccttctcgcc catgtcgatg cggccttcca gcgtggccga gcccatgtgg
       61 ggcagcagca cgacgttgtc gagcgcgatc agcttgggat tgaccgccgg ctcgtgctcg
      121 aacacgtcca ggccggcgcc ggccagctcg cccttggtca gcatgcgggt cagcgcgttc
      181 tcgtcgatga cctcgccgcg tgccgtgttg atgacgtagg cgtgcttctg cagcagcgcc
      241 aggcgccgcg ccgacagcag gtggaaggtg cccggggtgt gcgggcaatg cacggtgacc
      301 acgtccatgc gcgccagcat ctggtccagg ctttcccaat aggtcgcctc gagttcggtc
      361 tcgatgtcgg gatggacgcg cttgcggttg tggtagtgga tcgacatgcc gaacgccttg
      421 gcgcgccgcg ccaccgcctg gccgatgcgg cccatgccga tgatgcccag gcgcttgccc
      481 cagatgcggt ggcccagcat gtgggtgggg ctccagcccg accactcgcc cgagcgcatc
      541 aggcgctcgc cctcggccag ccggcgcggc acggccagga tcagcgccat ggtcatgtcg
      601 gcggtgtcct cggtcagcac accgggggtg ttggtgacgg tcacgccgcg ctggcgcgcc
      661 gtcgccaggt cgatgtggtc gacgccggtg ccgaaattgg cgatcagctt cagttgcggg
      721 ccggcctgcg ccatgatggc ggcatcgatg cggtcggtga tggtgggcac caggacgtcg
      781 gcggtcttga ccgcctcgat cagctcggtc ttcgacagcg gcttgtcgtc gagattgagc
      841 ctggtgtcga acagctccat catccgcgtc tcgatgacgt cgggaagctt gcgcgtgacg
      901 acgacgaggg gcttcttctg cggcattttg ttgtctcctc ccgggacccc gattttgttc
      961 acgcctagca agacggcgag gtgttgtcca gtgaagtgtt aacccggggg cttgcttgac
     1021 cgcgcccacc tgcaaacagg ataataggtg catcggggaa acgcttttgg ggacgacctt
     1081 gcgaccgcac gcatggatct tgttgttcgg ccttctgctc ctggttggcg ggctgccggc
     1141 tcgcgccggt gagaccagcg gcctgcccct gccccgcttc gtgtcgttgc ggtcggacga
     1201 ggtcaacgtg cgcaccggcc ccggcgtccg ctatcccatc gactggatct acgcccgcaa
     1261 ggacctgccc gtcgaagtca tcgccgaatt cgaggcgtgg cgcaagatac gcgattggca
     1321 gggaaccgaa ggttgggttc accaaagcat gttgtcggga cggcgcatga tggtggtgat
     1381 cggcacgccg cgctcattgc gcaattccga cgccgattcc gccgacccgg tcgccatcgt
     1441 cgagccgggg gtgacgggcc gcatcctgca atgcccgcgc aaccgcgact tctgccgcat
     1501 cgaggtcggc aaccaggccc agggctggct gcgccgcgac gagatgtggg gcgtctacaa
     1561 gggcgagtgg atcgaatagt cccccttgac gccccctgcc cccgcacccc acgtggcctg
     1621 catcaccacg ggcgagggag gcaggccatg gctggcggcg gtgccatgaa cgacaacttc
     1681 cacggctata acgacaacct gtccgaggcc aacaacgccg agctgggacc cgacggcatc
     1741 gacctcatcc tgccggcctt ggccgaaggc atcgccgcgt cggccaccga tgccgacgag
     1801 gcgctggagc tgtgccgcga cgccgcccag tccgagaacc tggacgagga gcaattcctg
     1861 gcgctggtcc gcatggtcga ggacatcacg gactgggaat tgccgggacc cggcgacgat
     1921 ttctagaagg cgacccgggt ttaaagtttc caagccccct gctcgtcatg cccggacttg
     1981 atcc
//
LOCUS       DATIKR010000440         2361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_224787, whole genome shotgun sequence.
ACCESSION   DATIKR010000440 DATIKR010000000
VERSION     DATIKR010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224787"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..142)
                     /locus_tag="VLL76_06890"
     CDS             complement(<1..142)
                     /locus_tag="VLL76_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HSV29265.1"
                     /translation="MSSTTVTLCADDYGLAPGIGRAIRDLIAAGRLQATGCMTGSPHW
                     PAE"
     gene            229..2016
                     /locus_tag="VLL76_06895"
     CDS             229..2016
                     /locus_tag="VLL76_06895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV29266.1"
                     /translation="MTQSAPASCGLLGSLPLPAFKADAGGIVVDCNDKLSDLLCLSRD
                     KVIGRPISELFPLAVAQPGKAEVEGRVRVGGRLRDVVVHRSDPVSIVVDVTDRRRAER
                     DLAESEARFVRLVELTREGLILHHKGIVVDVNPSFCRMVGWERDALIGRPYSVVVAPE
                     HVAVAERRVREGSSEAYCMDLLRRDGSKFPAEIIGRNLVYKGKHIRAVAVRDITQEVA
                     AERALAERELMYRQMFETNQAIKLLIDPESGIIVDANQAAEQFYGWSPAELRAMRITD
                     INVLPPDEVKAEMARARAEDRLYFRFRHRRASGEIRNVEVYSGPVTYHGRTLLHSIIH
                     DVTDRHRYLAELERKTEALERSNADLEQFAYVASHDLQEPLRTVVSYLQLLERRYKGQ
                     LGGDADEFIGFAVDGAKRMGRLIRDLLEYSRVETQGRALTPVDCAQAVDMALDALALV
                     IADSGAEITVGPMPHVRGDRSQLVSLFQNLIGNAVKYRHPGRPPRISVTARRDGDEWH
                     FQVRDNGIGIAPEYHDRIFMIFQRLHGPGRYDGTGIGLAVVKRIIVRHGGRVGVESVE
                     GEGSCFWFTLAATDAGAALCQIANPVVPS"
     gene            2069..>2361
                     /locus_tag="VLL76_06900"
     CDS             2069..>2361
                     /locus_tag="VLL76_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29267.1"
                     /translation="MKRATTVVLALGALVGVGMQPALAQVVIGGDDVPDVQVNMSVLD
                     RLGPTPNLADMLKADVPGARTNFAPAGKGPQGVQFRPYKPEKVIKKVAAERART"
BASE COUNT          389 a          770 c          806 g          396 t
ORIGIN      
        1 cctcggccgg ccaatggggg ctgccggtca tgcagccggt cgcctgcagc cgtccggcgg
       61 cgatcagatc gcgaatggcc cgaccgattc cgggggcaag gccgtaatcg tcggcgcaca
      121 gggtgacggt ggtcgaggac atggcgcaag gatacggatt ggcccccgcc ggcgcaacga
      181 tcgcggacgc cccttgcaga ctaaggtatg ggcaggcaca gtgtcgccat gacgcaatcc
      241 gcgcctgcct cgtgcggcct gttggggtcg ctgccgctgc cggctttcaa agccgatgcg
      301 ggcgggatcg tggtggattg caacgataag ttatctgatc tgctttgttt atcacgcgat
      361 aaggtcattg gccggccaat atcggaattg ttcccgcttg ccgtcgccca gccgggcaag
      421 gcagaggtcg agggacgggt ccgtgtcggt ggccgactgc gcgacgtggt tgtgcaccgc
      481 tcggacccgg tgtccatcgt ggtggacgtc accgatcgcc ggcgggccga gcgggacctg
      541 gcggaaagcg aggcccgctt cgtgcggttg gtcgagctga cccgtgaggg cttgatcctc
      601 catcacaagg gcatcgtggt cgacgtcaat cccagcttct gccgcatggt ggggtgggag
      661 cgcgacgcgc tgatcggccg gccctattcc gtcgtcgtcg cgcccgagca cgtcgcggtg
      721 gccgaacgcc gggtgaggga agggtcgtcc gaggcctatt gcatggatct gctgcggcgc
      781 gacggcagca agttcccggc cgagatcatc ggccgcaacc tggtctacaa aggcaagcac
      841 atccgcgccg tcgccgtgcg cgacatcacc caggaggtcg ccgccgagcg cgccctggcc
      901 gagcgcgagc tgatgtaccg ccagatgttc gagaccaacc aggcgatcaa gctgctgatc
      961 gacccggaaa gcggcatcat cgtcgatgcc aaccaggcgg ccgagcaatt ctacggctgg
     1021 tcgccggccg agctgcgggc gatgcgcatc accgacatca acgtgctgcc gcccgacgag
     1081 gtcaaggccg agatggctcg cgcccgcgcc gaggaccgcc tgtatttccg cttccgccac
     1141 cgccgcgcgt cgggcgagat ccgcaacgtc gaggtctatt ccgggccggt cacataccat
     1201 ggccgcaccc tgctgcattc catcatccac gacgtcaccg accgccaccg ctatctggcc
     1261 gaactggagc gcaagaccga ggcgctggaa cggtcgaacg ccgacctcga gcaattcgcc
     1321 tatgtcgcct cgcacgatct gcaggagccg ctgcgcacgg tcgtcagcta tctgcagttg
     1381 ctggaacgcc gctacaaggg ccagttgggc ggcgacgccg acgagttcat cggcttcgcg
     1441 gtggacggcg ccaagcggat ggggcggctg atccgcgatc tgctggaata ttcgcgggtc
     1501 gagacgcagg ggcgcgcgct gacgccggtg gattgcgccc aagccgtgga catggcgctc
     1561 gacgccctgg ccctggtgat cgccgattcc ggtgccgaaa tcaccgtcgg acccatgccg
     1621 catgtgcgcg gcgaccgctc gcaattggtc agcctgttcc agaacctgat cggcaacgcc
     1681 gtcaaatacc gccatcccgg ccggcctccg cgcatttccg tgaccgcccg gcgcgatggc
     1741 gacgaatggc atttccaggt acgcgacaac ggcatcggca tcgccccgga ataccatgat
     1801 cgcatcttca tgatctttca gcgcctgcac ggaccggggc gttatgacgg caccggcatc
     1861 gggctggcgg tggtcaagcg catcatcgtc cgccacggcg gccgcgtcgg ggtcgagtcg
     1921 gtggaaggcg agggcagttg cttctggttc accctggcgg cgaccgacgc gggcgcggcc
     1981 ttgtgtcaaa ttgccaatcc ggttgtcccc agctagccgt tgggctagtc tgtgcccaaa
     2041 tttcgaaggt attgggggaa gtggtcccat gaagagggcg acgacggttg ttctggcgct
     2101 tggcgccctg gtcggggtgg gcatgcagcc ggccctggcc caggtggtga tcggcggcga
     2161 cgacgtaccc gatgtccagg tcaacatgtc ggtgctggac cggcttggcc cgactcccaa
     2221 cctcgccgac atgctgaagg ccgacgtgcc cggtgcgcgg accaacttcg ctcccgccgg
     2281 caaggggccg cagggcgtgc agttccgtcc ctacaagccc gagaaggtca tcaagaaggt
     2341 cgccgccgag cgtgcccgca c
//
LOCUS       DATIKR010000441         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_54709, whole genome shotgun sequence.
ACCESSION   DATIKR010000441 DATIKR010000000
VERSION     DATIKR010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54709"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            336..1631
                     /locus_tag="VLL76_06905"
     CDS             336..1631
                     /locus_tag="VLL76_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HSV29268.1"
                     /translation="METARTGVDVLFVLLGAIMVLAMHAGFAFLEVGTVRKKNQVNAL
                     VKILTDFAVSTTAYFFIGYTLAYGATFLAPADVLVGKAEGSPFGANGYDLVKFFFLAT
                     FAAAIPAIISGGIAERAKFLPQLAATSILVAVVYPTFEGMVWGTRLGFQDLMTSTFGV
                     PFHDFAGSVVVHAVGGWIALGAVLMLGARRGRYKRDGHVVAIPPSNIPFLALGSWILC
                     AGWFGFNVMSAQTIAGISGLVAINSLMAMVGGILTSLVAGRNDPGFVHNGALAGLVAV
                     CAGSDVMHPVGAFITGGLAGGLFVVVFNACQNKWKIDDVLGVWALHGLCGFMGGIAAG
                     VFGQEALGGLGGVSFGAQVAGTATGALIAFASGLAVYGGLKKAVGIRLSEEDEFMGAD
                     LAVHQITAYPEELTSIHNDAGPLAVRASAANAARNPAHG"
     gene            1929..>2221
                     /locus_tag="VLL76_06910"
     CDS             1929..>2221
                     /locus_tag="VLL76_06910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29269.1"
                     /translation="MGAIVILAVLAMTIYEIWRQRVTTIATAEQSLESLSLALAEQTE
                     RAFHSVELVLDATVQSVENAGGIAGARGPGLHKTLKERTTGVPVLFGLAVIDAR"
BASE COUNT          344 a          763 c          712 g          402 t
ORIGIN      
        1 aagcgcagcg cggaaatcct gaagcaggcc gccgacggcc tgaaaaggta gtcggaaact
       61 atcgcgcaga atttaatcac aatagttttt tgcccatatt ctaaacagca tcggtgcaac
      121 cgttcgacgc aggcgcccgc cttgcccaaa ttcgcggcaa ccccaggcgc ccgatgcttg
      181 tctggcaggc aaccgccgcc tgcacaaaat cgcggcacag ccatagcgca ctgaaatcac
      241 tgcgctttct ccgcccaatc gtttggcacg ccatttgata tacggcgccc gccctttttg
      301 gggcttgggg ccaacgcgga cggagtgcag gcgaaatgga aacggcgcgg accggagttg
      361 atgtactttt cgtgctcttg ggagcgatca tggtgctggc gatgcacgcc ggcttcgcct
      421 tcctggaagt gggcaccgtt cgcaagaaga accaggtcaa cgcgctggtg aagatcctta
      481 cggacttcgc cgtttcgacc accgcctatt tctttatcgg ctacaccctg gcctacggcg
      541 ccaccttcct ggcccccgcc gacgtgctgg tgggcaaggc cgagggcagc ccgttcggcg
      601 ccaacggcta cgacctggtg aagttcttct tcctggcgac cttcgccgcc gccatccccg
      661 ccatcatctc gggcggcatc gccgagcgcg ccaagttcct gccgcaactg gccgccacct
      721 cgatcctggt ggcggtggtc tatccgacct tcgaaggcat ggtgtggggc acccgcctgg
      781 gcttccagga cctgatgacc tccaccttcg gcgttccctt ccacgacttc gccgggtcgg
      841 tggtggtcca cgccgtcggg ggctggatcg cccttggcgc cgtgctgatg ctgggcgcgc
      901 ggcgcggccg ctacaagcgc gacggccacg tggtcgccat tccgccgtcg aacattccgt
      961 tcctggcgct gggctcgtgg atcctgtgcg ccggctggtt cggcttcaac gtcatgagcg
     1021 cccagaccat cgccggcatt tccggcctag tggcgatcaa ctcgctgatg gccatggtgg
     1081 gcggcatcct caccagcctg gtggccggcc gcaacgaccc cggcttcgtc cacaacggcg
     1141 ccctggccgg cctggtcgcg gtgtgcgccg gttccgacgt gatgcatccg gtcggcgcct
     1201 tcatcaccgg cggccttgcc ggcggcctgt tcgtggtggt cttcaacgcc tgccagaaca
     1261 agtggaagat cgacgacgtg ctgggcgtgt gggcgctgca cggcctgtgc ggtttcatgg
     1321 gcggcatcgc cgccggcgtg ttcggccagg aagccctggg cggcctgggc ggcgtcagct
     1381 tcggtgcgca ggtggccggc accgccaccg gcgccctgat tgccttcgct tccggcctgg
     1441 cggtctatgg cggcctgaag aaggcggtcg gcatccgcct gtcggaagag gacgagttca
     1501 tgggcgccga cctggccgtc caccagatta ccgcctatcc cgaggagctg acctcgatcc
     1561 acaacgacgc cggcccactg gccgtgcgcg cctcggcggc caacgccgcc cgcaacccgg
     1621 cccacggcta gagcattgtt cgctctgacc cgctcagagc gaacaatgcg aaagcccgag
     1681 cggcgtctga gcctggctcg ccccggaggg gcggccgcca aaggaaaaaa ctagagccgg
     1741 ttccatttga atggagacgg ctctagcgtc cctgccgccc ccacccgccg acgcgggtgg
     1801 gggtgcactt ccggaatcgt tgtgttaggc tgtctcccgg ggggctttcc tggggaagtc
     1861 ttttggtcca ccgcgtcaac agcctgtggc ggcgacacat ttcggcaagc ggccgggcgg
     1921 tgatcgtctt gggcgcgatc gtcatcctgg ccgtgctggc gatgacgatc tacgagatct
     1981 ggcgccagcg cgtcaccacc atcgccaccg ccgagcaatc cctcgaatcc ctcagcctgg
     2041 ccctggccga gcagaccgag cgcgccttcc attccgtcga acttgtgctg gacgccaccg
     2101 tgcagtcggt cgagaacgcc ggcggcatcg ccggggcgcg aggccccggc ctgcacaaga
     2161 cgctgaagga acgcaccacc ggcgtgccgg tgctgttcgg cctggccgtc atcgacgccc
     2221 g
//
LOCUS       DATIKR010000442         2669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_127362, whole genome shotgun sequence.
ACCESSION   DATIKR010000442 DATIKR010000000
VERSION     DATIKR010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127362"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="VLL76_06915"
     CDS             complement(<1..867)
                     /locus_tag="VLL76_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV29270.1"
                     /translation="MAPAAHCRDLRVADTHPADYPTVQALTEMGRLIAERSDGRYRLK
                     VFHSRVLGEEPETIEQTRAGALDMVRVSITLFNAIVPETQAASLPFLFHSVEHLHHVV
                     DGPVGAEILRAFDRHGLVALAYYDAGARSFYNARHPIRTPADLKGLRIRVQQSPLAEA
                     MVTALGATPVPLAYGQVGVGLKAGMIDGAENNWPSYQDAGHFETARHYSVSEHMMAPE
                     VVVMSRKVWDSLPAADQALIRQAAKDSVPFMRRLWAGREQAAQDRLKASGVVVNPVDK
                     AQFAAAMAPVYDR"
     gene            1084..1521
                     /locus_tag="VLL76_06920"
     CDS             1084..1521
                     /locus_tag="VLL76_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSV29271.1"
                     /translation="MRLTLHTDYALRVLVHVGLQAGELVTINEIAECYGISKNHLTKV
                     VHQLGRSGYLETVRGKYGGVRLMVAPEAVRLGDFIKKTEDDFALARCMRCGAEGECKI
                     SVNCLAKNAFGEALEVFFTSLNRYTLADMIAKERGCEPLAACC"
     gene            1588..2364
                     /locus_tag="VLL76_06925"
     CDS             1588..2364
                     /locus_tag="VLL76_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29272.1"
                     /translation="MSIESDNENERRVISEFLEELRDTASALQVLLGNMRSNSVTPAE
                     GLERLKRDASNLRTQAYALNLPMIKLVTHRLDEYVGELKQVTPAQIDEIQIFVDKIEK
                     LADGEQVTDVEMPAMVRALPAKPSVDVDFGSIEQKNVEVMLVLPEKAMARIVERELAA
                     CGYRTSVVRSPFEAIEQVVHSRPDMVVASMELGALSGVDLGCALAAMPTTQAVPFAVL
                     TSYEWGHPKLRGLPPRAALIRKGSQFGDDLAETFARFGIT"
     gene            complement(2357..>2669)
                     /locus_tag="VLL76_06930"
     CDS             complement(2357..>2669)
                     /locus_tag="VLL76_06930"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSV29273.1"
                     /translation="DPLATAERVLAEARAWRPTLMVGPPPVGDCPATDARIQALSRDL
                     AALCARLGIPYLPVFEELSADPTWRREAAADDGSHPDAGGYCVLAGLVAAWPAWRDAI
                     R"
BASE COUNT          468 a          892 c          897 g          412 t
ORIGIN      
        1 gcggtcgtag acgggcgcca tggcggccgc gaattgcgcc ttgtcgacgg ggttgacgac
       61 cacgccggac gccttgagcc ggtcctgggc cgcctgctcg cgcccggccc acaggcggcg
      121 catgaacggc accgaatcct tcgccgcctg gcggatcagg gcctggtcgg cggcgggcag
      181 ggagtcccaa accttgcggg acatcaccac cacctcgggc gccatcatgt gttcgctgac
      241 gctgtaatgc cgcgccgtct cgaaatgacc ggcatcctgg taggacggcc agttgttctc
      301 ggcaccgtcg atcatcccgg ccttcaatcc gacgcccacc tgcccgtaag ccagcggcac
      361 cggcgtcgcg cccagggcgg tgaccatggc ctcggccagg ggcgattgct gcacccggat
      421 gcgcaggccc ttgaggtcgg ccggcgtgcg gatggggtgg cgggcgttgt agaacgagcg
      481 ggcgccggcg tcgtaatagg ccaaggccac cagcccatgg cggtcgaagg cgcgcaggat
      541 ctcggcgccg accggtccat cgacgacatg atgcagatgc tcgaccgaat ggaacaggaa
      601 gggcagcgac gccgcctggg tctcggggac tatggcgttg aacagggtga tgctgacgcg
      661 gaccatgtcg agggcgccgg cgcgggtctg ctcgatggtc tccggctcct cgcccaggac
      721 ccgcgaatgg aacaccttga ggcggtaacg gccgtccgac cgctcggcga tcagccggcc
      781 catctcggtc agggcctgga cggtggggta gtcggcggga tgggtgtcgg cgacacgcaa
      841 atcgcggcaa tgggcggcgg gcgccatcag caacccgatg gcggcggcga cgacggtcaa
      901 ccgaaatctg gccgacttca cccgcttcct cccctgtacc cgaagccttt gtagccttgt
      961 cggggcagcg aggaaaggcg caaatggctt cgcgcatggg agccatgacg gttcaggtgt
     1021 tgacccgata ctgcaaccat tggaagatgc tgcgctttat cgatggataa gccaaaggct
     1081 gtcatgcgtc tgacattgca taccgattac gccctccgcg tcctggtcca cgtcggcctg
     1141 caggcaggag aactggtcac catcaacgag atcgccgagt gttacggcat ttcgaagaac
     1201 cacctgacca aggtggtcca ccaactcggc cgctcgggct atctcgagac ggtgcgcggc
     1261 aagtatggcg gcgtccggct catggtcgcg ccggaggccg tgcgcctggg agacttcatc
     1321 aagaagaccg aggacgattt cgccctggcg cgctgcatgc gttgcggcgc cgaaggcgag
     1381 tgcaagatca gcgtcaattg cctggcgaag aacgccttcg gcgaagcctt ggaagtgttc
     1441 ttcacctccc tcaaccgcta caccctggcc gacatgatcg ccaaggaacg cggttgcgaa
     1501 cccttggcgg cctgctgctg aaaaggcggg tttccaccgc cacgtgagtt ggtgtaatcc
     1561 tgggggggat tgcacagggg gggattgatg tccatcgaat cggacaacga gaacgaacgc
     1621 cgcgtcatca gcgaattcct cgaggagctg cgcgacactg ccagcgccct gcaggtcctg
     1681 ttgggcaaca tgcgctcgaa cagcgtcacc ccggccgagg ggctcgagcg gctcaagcgc
     1741 gacgccagca acctgcgcac ccaggcctat gcgttgaacc tgccgatgat caagctggtg
     1801 acccaccggc tcgacgaata tgtcggcgaa ctgaaacagg tcacccccgc ccagatcgac
     1861 gaaatccaga tcttcgtcga caagatcgag aagctggccg acggcgagca ggtcaccgac
     1921 gtcgaaatgc cggccatggt ccgcgccttg ccggccaagc ccagcgtgga cgtggatttc
     1981 ggctcgatcg agcagaagaa cgtcgaggtc atgctggtgc tgccggaaaa ggccatggcc
     2041 cgcatcgtcg agcgcgagct tgccgcctgc ggctaccgca cctcggtggt gcgcagcccg
     2101 ttcgaagcca tcgaacaggt cgtccattcc cgcccagaca tggtggtggc gtccatggaa
     2161 ctgggggcgc tgtcgggcgt cgacctcggc tgcgccctgg ccgccatgcc gaccacccaa
     2221 gcggtgccgt tcgccgtgct gaccagctat gaatggggcc atcccaagct gcgcggcctg
     2281 ccgccgcgcg ccgccctgat ccgcaagggt tcgcaattcg gcgacgacct ggccgagacc
     2341 ttcgcccgct tcggcatcac ctgatcgcgt cgcgccaggc cggccaggcg gcgaccaggc
     2401 cggccagcac gcaatagccg ccggcatcgg gatgcgagcc gtcgtcggcg gcggcttcgc
     2461 ggcgccacgt cgggtcggcc gacagttcct cgaacaccgg cagatacgga atccccagcc
     2521 gcgcgcacaa cgccgccagg tcgcgcgaca gcgcctggat gcgggcgtcg gtggccgggc
     2581 aatcccccac cggcggcggc cccaccatca gcgtcgggcg ccatgcccgc gcctcggcca
     2641 gcacgcgctc ggccgtcgcc agcgggtcc
//
LOCUS       DATIKR010000443         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79613, whole genome shotgun sequence.
ACCESSION   DATIKR010000443 DATIKR010000000
VERSION     DATIKR010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79613"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="VLL76_06935"
     CDS             complement(<1..878)
                     /locus_tag="VLL76_06935"
                     /inference="COORDINATES: protein motif:HMM:NF018290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSV29274.1"
                     /translation="MERERVSGPPVVAVFNHKGGVAKTTTAANLAVCLAAHGYRVVLV
                     DFDAQGNATGGFGHLPLPPVGAYDVVTGRASLDQALLDTPFAGLKLLPATAQLRTAEQ
                     ELAAHERSHAHLRDRLAEHGLERFADIAVIDCPPALGTMTVNALAAAAAVLIPARPDP
                     YTHEGLVNTWYEVKRLRETANAALSVAGIVLTMTESEGAAADVARTIRAEFGDRVYGV
                     EIAADPKVAEAAQLSIPVAVLDPDGLAGRAYFDTCAELLARLRRQGRPETALPEPQGR
                     DCALNTLRDWRAGQLAL"
     gene            complement(910..1443)
                     /locus_tag="VLL76_06940"
     CDS             complement(910..1443)
                     /locus_tag="VLL76_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV29275.1"
                     /translation="MRVPNVTFKTRVRNDSLPGPNPFEWKDITSDDIFKGKKVVLFAL
                     PGAFTPTCSTTHLPRYEETYDEFKALGVDAVICLSVNDAFVMYQWGKAQGADRVFLLP
                     DGNGEFSRKMGMLVDKSNLGFGMRSWRYSMYVEDGEIVKMFPEPGYEDNCPTDPFQVS
                     DADTMLTWLKGHKAQAA"
     gene            complement(1501..1599)
                     /locus_tag="VLL76_06945"
     CDS             complement(1501..1599)
                     /locus_tag="VLL76_06945"
                     /inference="COORDINATES: protein motif:HMM:NF015935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HSV29276.1"
                     /translation="MRDALTAVGITLHDHLIVGRKGHVSFKGHGLM"
BASE COUNT          256 a          516 c          577 g          256 t
ORIGIN      
        1 agggccaact ggccggcccg ccagtcccgc aaggtgttga gcgcgcaatc gcgcccctgc
       61 ggttcgggca gggcggtttc cgggcggccc tggcggcgca ggcgggcaag caattccgcg
      121 catgtgtcga aataggcccg gccggccagg ccgtcggggt ccagcaccgc gaccggaatg
      181 gacaactggg ccgcctcggc gaccttgggg tcggcggcga tctcgacgcc gtagacacga
      241 tcgccgaatt cggcccggat ggtacgggcg acgtcggcgg cggcgccctc ggattcggtc
      301 atggtcagca cgatgccggc cacggacaat gcggcattgg cggtctcgcg caaccgcttg
      361 acctcgtacc aggtgttgac caggccctcg tgggtatagg ggtcgggccg cgccgggatc
      421 aacaccgcgg cggcggcggc cagggcgttg acggtcatgg tgcccaatgc cggcgggcag
      481 tcgatcaccg cgatgtcggc gaagcgctcc agcccatgct cggccaaacg gtcgcgcaga
      541 tgggcatgcg agcgctcgtg cgcggccagt tcctgctcgg cggtgcgcaa ttgcgcggtg
      601 gcgggcagca gcttcaggcc ggcgaagggg gtgtccagca aggcctgatc cagcgaggcc
      661 cgtccggtga ccacgtcata ggcgcccacc ggcggcagcg gcagatgccc gaagccgccg
      721 gtggcgttgc cctgcgcgtc gaaatccacc agcaccacgc gatagccgtg cgccgccagg
      781 cacaccgcca gattggccgc cgtggtcgtc ttggcgaccc cgcccttgtg gttgaacacc
      841 gccaccaccg gcggcccgct gacccgctca cgttccatgc ggggcaggat agccgatggg
      901 ggcccgcgat caagccgcct gcgccttgtg gcccttcagc caggtcagca tggtgtcggc
      961 gtccgagacc tggaaggggt cggtggggca attgtcctcg tagccgggct cggggaacat
     1021 cttcacgatc tcgccgtcct cgacatacat ggaatagcgc caactgcgca tgccgaagcc
     1081 caggttcgac ttgtcgacca gcatgcccat cttgcgcgag aattcgccgt tgccgtcggg
     1141 cagcaggaac accctgtcgg cgccctgggc cttgccccac tggtacatga cgaaggcgtc
     1201 gttgaccgac aggcagatga cggcatcgac gcccagcgcc ttgaactcgt cataggtttc
     1261 ttcgtagcgc ggcaggtggg tggtcgagca ggtcggggtg aaggcgccgg gcagggcgaa
     1321 cagcaccacc ttcttgcctt tgaagatgtc gtccgaggtg atgtccttcc actcgaacgg
     1381 attggggccg ggcagggaat cgttgcggac acgggtcttg aaggtgacgt tgggaacgcg
     1441 catcgcggac ctccgctgtg gctgatgcat gggcaacagc ggcgggggaa ggcgggttct
     1501 ctacatcagg ccgtggccct tgaagctgac atggcccttg cggccgacga tcaggtggtc
     1561 gtgcagagtg atgccgacgg cggtcagggc atcgcgcacc tggcg
//
LOCUS       DATIKR010000444         1936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_103413, whole genome shotgun sequence.
ACCESSION   DATIKR010000444 DATIKR010000000
VERSION     DATIKR010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103413"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /gene="dapB"
                     /locus_tag="VLL76_06950"
     CDS             <1..596
                     /gene="dapB"
                     /locus_tag="VLL76_06950"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HSV29277.1"
                     /translation="DAVIDFTAPAATVTHAGMAAAAGKVLVVGTTGLSKDDEAKLQQA
                     ADRVPVVYAPNFSVGVNLLMALTERAASILGDDYDIEIVEMHHRHKVDAPSGTALGLG
                     RAAAAGRGVPLDSVWCKARDGHTGARPKGEIGFATLRGGDVVGDHTVMFAAEGERVEL
                     THKASSRAVFAKGAVRAALWAKGKPAGLYTMRDVLGL"
     gene            598..1362
                     /gene="dapB"
                     /locus_tag="VLL76_06955"
     CDS             598..1362
                     /gene="dapB"
                     /locus_tag="VLL76_06955"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HSV29278.1"
                     /translation="MRIGVTGCGGRMGRMLMEAVRAVEGCTLVGGSVRPGSVAPDLGV
                     PVLTDPAGLFALSDVVLDFTNPAATARHADLAAEHGKVLVVGTTGLSGEEEDRLRRAA
                     GKVAVVYAPNFNIGLNLLMALTERAASVLADDYDIEIVEMHHRHKVDAPSGTALGLGR
                     AAAAGRGVALDGVWCKARDGHTGARPKGEIGFATLRGGDVVGDHTVMFAAEGERVGLT
                     HKASSRAVFAKGAVRAALWAKGKPAGLCTMRDVLGL"
     gene            complement(1359..>1936)
                     /locus_tag="VLL76_06960"
     CDS             complement(1359..>1936)
                     /locus_tag="VLL76_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSV29279.1"
                     /translation="TIREFRMDGSGGRTFAAGLRNPVGIAFRPGSEELWAVVNERDGL
                     GDELVPDYLTHVQEGGFYGWPYAYLGPNPQPGFADRAPAKVRATLVPDLLFQSHSAPL
                     GLAFWHGDAYVGLHGSWNRSDPVGYFVARVPFRDGKPVGHYEAFATGFVVDVSGAARV
                     WGRPVGVAVGPDDALYVSDDTGGTVWRITRR"
BASE COUNT          292 a          658 c          714 g          272 t
ORIGIN      
        1 ccgatgcggt gatcgatttc accgccccgg ccgccaccgt cacccatgcc ggcatggccg
       61 ccgccgccgg caaggtgctg gtggtcggca ccaccggcct gagcaaggac gacgaggcca
      121 agctgcaaca ggcggccgac cgcgttccgg tggtctatgc ccccaatttc agcgtcggcg
      181 tcaacctgct gatggcgttg accgagcgcg ccgcctcgat cctcggcgac gattacgata
      241 tcgaaatcgt cgagatgcac caccgtcaca aggtggatgc cccgtcgggc accgctttgg
      301 gcctgggccg tgcggcggcc gccgggcgcg gcgtgccgtt ggacagcgtg tggtgcaagg
      361 cgcgcgacgg ccacaccggg gcgcggccca agggcgaaat cggcttcgcc accctgcgcg
      421 gcggcgacgt ggtcggcgac cacaccgtga tgttcgccgc cgagggcgag cgggtcgagc
      481 tgacccacaa ggcctccagc cgcgccgtgt tcgccaaggg cgccgtgcgg gcggcgcttt
      541 gggccaaggg caagccggcg ggattgtata cgatgcggga cgtgctgggt ctctagcatg
      601 aggatcggcg tcaccggctg cggcggacga atgggccgga tgctgatgga agcggtgcgg
      661 gccgtcgagg gctgcaccct tgtcggcggc agcgtgcggc ccggctccgt cgcacccgac
      721 ctgggtgtgc cggtgctgac cgatcctgcc gggcttttcg ccctgtccga tgtggtgctc
      781 gacttcacca atccggccgc cacggcccgg catgcggacc tggccgccga gcacggcaag
      841 gtgctggtgg tgggcaccac cggcctgtcc ggcgaagagg aagaccggct ccgccgcgcg
      901 gcgggaaagg tggcggtggt ctatgccccc aacttcaaca tcggcctcaa cctgctgatg
      961 gccctgaccg aacgcgccgc ctcggtcctg gcggacgatt acgacatcga aatcgtcgag
     1021 atgcaccatc gccacaaggt ggacgcgccg tcgggcaccg ccctgggcct ggggcgtgcg
     1081 gccgccgccg ggcgcggcgt tgctttggac ggcgtgtggt gcaaggcgcg cgacggccat
     1141 accggggcgc ggcccaaggg cgagatcggc ttcgccacgc tgcgcggcgg cgacgtggtc
     1201 ggcgaccata ccgtgatgtt cgcggccgag ggcgagcgcg tcgggctgac ccacaaggcg
     1261 tccagccggg ccgtgttcgc caagggcgcg gtgcgggccg cactttgggc caagggcaag
     1321 ccggcgggct tgtgtacaat gcgggacgtg ctgggccttt agcgccgggt gatccgccac
     1381 acggtgccgc cggtgtcgtc gctgacgtaa agggcgtcgt cgggtccgac cgccacgccc
     1441 accggccggc cccaaacccg tgccgccccc gaaacatcca ccacgaagcc ggtggcgaag
     1501 gcctcgtaat ggccaaccgg cttgccgtca cggaacggca cccgggcgac gaaatagccg
     1561 accgggtccg agcggttcca cgagccgtgc agcccgacat aggcgtcgcc atgccagaac
     1621 gccaagccaa ggggcgccga gtgcgactgg aacagcaggt cgggcaccag ggtggcgcgc
     1681 accttggccg gcgcgcggtc ggcgaagcct ggctgcgggt tgggtccgag ataggcatag
     1741 ggccagccgt agaagccgcc ctcttgcaca tgcgtcaggt agtcaggcac caattcgtcg
     1801 cccaggccgt cacgctcgtt gaccaccgcc cataactcct cgctgccggg gcggaaggcg
     1861 atgccgacgg ggttgcgcag gccggcggcg aaggtgcggc cgccgctgcc gtccatgcgg
     1921 aattcgcgga tggtgg
//
LOCUS       DATIKR010000445         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_176324, whole genome shotgun sequence.
ACCESSION   DATIKR010000445 DATIKR010000000
VERSION     DATIKR010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176324"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..1147)
                     /locus_tag="VLL76_06965"
     CDS             complement(212..1147)
                     /locus_tag="VLL76_06965"
                     /inference="COORDINATES: protein motif:HMM:NF021600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2333 family protein"
                     /protein_id="HSV29280.1"
                     /translation="MIERLDGWRQRLAGLSALAWWWWLAPAAALAILLYYPVGMALTH
                     HVDDDPDFALAANAVSGTQSRAVAMASALVLREVEGNAWTANDPFFQPSWALDDMPNF
                     QQGMVAAVARFAVQLNELSPAHDLDKAAGLLKYPGTVWMFDPSTSWAPTASSEKQYRN
                     AARWLDNFNHRLGTGDAQLGRDALSLRAILVGVSADLGDASVLLERQIAEGGIVDFAA
                     DDVFHATKGRLYAYSLLLRELGWDYAPVLANGELGAQWRQMLETLRQAAALDPLMVVS
                     GSPDGLAMPSHLASQGFYLLRARAQLDGIIAHTAP"
     gene            complement(1144..>1606)
                     /locus_tag="VLL76_06970"
     CDS             complement(1144..>1606)
                     /locus_tag="VLL76_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HSV29281.1"
                     /translation="GAATRVMSLRDGTKKMSKSDESDYSRINMTDDADTIALKVRKAK
                     TDLFPMPDTLDGLAERPEASNLIGIYAALSDKDKAAIVEHYAGQQFSDFKKDLVDLAV
                     SVLGPINTEMKRLMEDTAHIDAILKKGAERANAIAEPIIKDVYDIVGFLRP"
BASE COUNT          261 a          531 c          567 g          247 t
ORIGIN      
        1 cggcgaaacc ggtggtgatg gccaccagat gcttggacag atcggccacc agcggctcgg
       61 ccgcccgcgc cgggagcacc gccagcagca gcacggccag gatggagagc gcccgcgtca
      121 aagcttgcct cccgcgtcag gcaggtagtc caagcttgaa acacccggcc cacgcaaacg
      181 ggggcagcgg cacccgcaat tgcccgcccg gtcagggcgc ggtatgggcg atgatgccgt
      241 cgagctgggc gcgggcgcgc agaagataga agccctggct ggccagatgg ctgggcatgg
      301 ccagcccgtc cggactgccg ctgaccacca tcaggggatc gagggcggcg gcctggcgca
      361 gagtctccag catctggcgc cattgcgcgc ccagttcgcc gttggccagc accggcgcgt
      421 aatcccagcc caactcgcgc agcagcaggg aataggcgta cagccgcccc ttggtggcgt
      481 ggaagacgtc gtcggcggcg aaatcgacga tgccgccctc ggcgatctgg cgctccagca
      541 gaaccgaagc gtcgccgaga tcggccgaca cgccgaccag gatggcccgc agcgacagcg
      601 cgtcgcggcc cagttgggcg tcgccggtgc ccaggcggtg attgaagttg tcgagccagc
      661 gcgccgcgtt gcggtactgc ttctcgctgg aagccgtcgg cgcccacgag gtcgaggggt
      721 cgaacatcca cacggtgccg ggatatttca gcaggccggc ggccttgtcg aggtcgtggg
      781 cggggctcag ctcgttgagc tggaccgcga agcgcgccac cgccgcgacc atgccctgct
      841 ggaagttggg catgtcgtcg agcgcccagg acggctggaa gaacgggtcg ttggccgtcc
      901 aggcgttgcc ctcgacctcg cgcagcacca gggccgacgc catggcgacg gcacggctct
      961 gggtgcccga cacggcgttg gcggccaggg cgaaatcggg gtcgtcgtcc acatggtggg
     1021 tcagcgccat gccgaccggg taatagagca ggatcgccag cgccgccgcc ggcgccagcc
     1081 accaccacca cgccagggcg gaaagccccg ccagacgctg gcgccagccg tcgaggcgct
     1141 cgatcatggc cgcaggaagc ccacgatgtc gtagacgtcc ttgatgatcg gctcggcgat
     1201 ggcgttggcc cgctcggcgc ccttcttcag gatggcgtcg atgtgcgcgg tgtcttccat
     1261 cagccgcttc atttcggtgt tgatgggtcc cagcaccgac accgccagat ccaccagatc
     1321 cttcttgaag tccgagaact gctggccggc atagtgctcg acgatggcgg ccttgtcctt
     1381 gtcggacagg gcagcgtaga tgccgatcag gttcgacgcc tcgggccgct ccgccaggcc
     1441 gtcgagggtg tcgggcatgg ggaacaggtc ggtcttggcc ttgcgcacct tcaacgcgat
     1501 ggtgtcggcg tcgtcggtca tattgatgcg ggaataatcg gattcgtccg acttcgacat
     1561 cttcttggtg ccgtcgcgca ggctcatcac gcgggtggcg gcgccg
//
LOCUS       DATIKR010000446         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_79665, whole genome shotgun sequence.
ACCESSION   DATIKR010000446 DATIKR010000000
VERSION     DATIKR010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79665"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1287)
                     /locus_tag="VLL76_06975"
     CDS             complement(<1..1287)
                     /locus_tag="VLL76_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV29282.1"
                     /translation="MPSFQPPIRDMAFVIEEIGDLAGISALPGYEEASADLVTAVLAE
                     AGRFGSEVLAPLNPVGDREGCVLANGVVTTAKGFPDAYRQFVEGGWNAVPFDPEYGGQ
                     GLPWLVAAAVQEIWHAANMSFALVPMLTQGAVEALSVHGSDHLKQTYLAKLISGEWTG
                     TMNLTEPSAGSDVGALRTKAVRAGDGSYRITGQKIFITAGEHDMAENIIHLVLARLPD
                     APPGVKGISLFVVPKFLVNPDGSLGERNDLRCIKLEEKMGIHASPTCVMAFGDAGGAT
                     GWLVGEENKGLALMFTMMNNARLSVGLEGIAQAERAYGKAVAYAKERVQGHSPGRHDH
                     VTIIHHPDVRRMLMTSKALTEATRALAYWTSAQIDLSHRHPDEAERRRAHAMVELMTP
                     VVKAWGTDTGVRVADTALQVFGGMGYVEETGVAQHLR"
     gene            complement(1494..>1815)
                     /locus_tag="VLL76_06980"
     CDS             complement(1494..>1815)
                     /locus_tag="VLL76_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSV29283.1"
                     /translation="AVEAAMPGVRVVAFGHIGDGNIHLNLTQPEGADKQAFLADWARM
                     NKIVHDIVADMDGSVSAEHGIGQLKIEEMARYKSDVELDLMQRIKAALDPQGIMNPGK
                     VLPS"
BASE COUNT          260 a          605 c          630 g          320 t
ORIGIN      
        1 gcgcagatgc tgcgccacgc cggtctcctc gacatagccc atgccgccga acacctgcaa
       61 tgcggtgtcg gcgacgcgca cgccggtgtc ggtgccccat gccttcacca ccggcgtcat
      121 caactcgacc atggcatggg cgcgcctgcg ctcggcctcg tcgggatggc ggtgcgacag
      181 gtcgatctgg gcgctggtcc aataggccag ggcgcgggtc gcctcggtca gcgccttcga
      241 cgtcatcagc atgcgccgga cgtcggggtg gtggatgatg gtgacgtggt cgtggcggcc
      301 ggggctgtgg ccctggacgc gctccttggc gtaggcgacc gccttgccgt aggcgcgctc
      361 ggcctgggcg atgccttcca ggccgaccga caggcgggcg ttgttcatca tggtgaacat
      421 cagggccagg cctttgtttt cctcgcccac cagccagccg gtggcgccgc cggcgtcgcc
      481 gaaggccatc acgcaggtcg ggctggcgtg gatgcccatc ttctcttcca gcttgatgca
      541 gcgcaggtcg ttgcgctcgc ccagcgaacc gtcgggattg accaggaact tgggcaccac
      601 gaacagcgag atgcccttga cgccgggcgg ggcgtcgggc aggcgggcca gcaccaggtg
      661 gatgatgttt tccgccatgt cgtgctcgcc ggcggtgatg aagatcttct ggccggtgat
      721 gcgatagctg ccgtcgccgg cccttaccgc cttggtgcgt agcgcgccga cgtccgagcc
      781 ggccgacggc tcggtcaggt tcatggtgcc ggtccattcg cccgagatca gcttggccag
      841 ataggtctgc ttgagatggt ccgagccgtg caccgacagc gcctcgaccg cgccctgggt
      901 cagcatcggc accagcgcga agctcatgtt ggcggcgtgc cagatttcct gcacggcggc
      961 ggcgaccagc cagggcaggc cctggccgcc gtattccgga tcgaacggca ccgcgttcca
     1021 gccgccttcg acgaactggc gataggcgtc ggggaagccc ttggcggtgg tgaccacgcc
     1081 gttggccagc acgcagccct cgcggtcgcc caccgggttg agcggcgcca gcacctcgga
     1141 cccgaaacgc ccggcctcgg ccagcacggc ggttaccagg tcggcggatg cctcctcata
     1201 gcccggcagc gccgagatcc ccgccagatc gccgatctcc tcgatgacga aggccatgtc
     1261 gcggatgggg ggctggaagc tcggcatcgg ggcgctcctc gttttcgttg gaggaacagt
     1321 ggacgtgaac cagggtgttc ccgtcaagcc gtccgggctg catggcccta tgcggatggg
     1381 tgggggggat tgtcactctg aggcgcagcc gaagagtctt tcaggcacgg acggccgccg
     1441 cctgatgctt cgctgcgctc agcatgacac aagagccgaa cggacggccg ccgtcacgac
     1501 ggcagcacct tgccggggtt catgatgccc tgcgggtcca gcgccgcctt gatccgctgc
     1561 atcaggtcca gttccacgtc cgacttgtag cgcgccattt cctcgatctt cagttggccg
     1621 atgccgtgtt cggccgacac gctgccgtcc atgtcggcga cgatgtcgtg gacgatcttg
     1681 ttcatgcgcg cccagtcggc caggaacgcc tgtttgtcgg caccctcggg ctgggtcagg
     1741 ttgaggtgga tgttgccgtc gccgatatgg ccgaaggcga cgacgcgcac gccgggcatg
     1801 gccgcctcga ccgcc
//
LOCUS       DATIKR010000447         2980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_91517, whole genome shotgun sequence.
ACCESSION   DATIKR010000447 DATIKR010000000
VERSION     DATIKR010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91517"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..2023)
                     /locus_tag="VLL76_06985"
     CDS             complement(131..2023)
                     /locus_tag="VLL76_06985"
                     /inference="COORDINATES: protein motif:HMM:NF024306.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSV29284.1"
                     /translation="MGVTVSKAQVAGKVALLQKHLQVIAAVEYTTLPFYLTATYSFTK
                     DALAYNGDNLPTPPLFAAQQTVLSVAVQEMYHLQEACNLGNSVGVDPNLPMLSMKAGK
                     KITVPYIVHDGKPLVLELGNLPQAIADMAAIEQADPSLYPPPNENCVYGSIAELYHAT
                     WQLMTEVYKPAAGLAADAADDTPVEGGKQVVYGTFGSTYTYNAVTSPQDAMNVINAIA
                     DQGEGQVVAKLMLKQKHAAMLKAGSGDVPQTCPQTVQKQFQASAGSRFADASQLTHYQ
                     RFLDVGAVLNSQDWEAAIGGPMFYQADGKISKDLPSWAPKDAKVVQNSLNAIWSYTVD
                     LLHDGFSMGTLNPNSTAGKDKMAPTFTEAMMAFKYVIPMMWQLGHCPSFVYKKNVTAK
                     KVQAAMDVVDPLCLFHWDTRTRKLLVEKNMPTNACQGLNECAGKGWGGLGTTKGDGAC
                     ATAGFHTCGANNMCGAEGGCGFLVSKSGEACSSKTAAPKKNGCGAPAKPANLCGGGKP
                     SKPTNLCGGGGGGGMLPASEEWIPGQNGCKAKGGCETPISTQQVFNVNAGPMIDAQTD
                     WSDADKARLKGLIGENVWDTARTQMAAKWGVDPSKLPQPQTKKIGDIDYDGTKRRSCI
                     QPTSAK"
     gene            2275..>2980
                     /locus_tag="VLL76_06990"
     CDS             2275..>2980
                     /locus_tag="VLL76_06990"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSV29285.1"
                     /translation="MDFATLAGMLIGILVVTLAIMTGSELGIFLDLPSILIVVGGTFA
                     ACMVKFPFSGVFVAMPVGFKAAFTNEKEQPRDFIKKAIAISKLVRKSGVVAAEGVKVR
                     NPFFKKGLQLVADGRDLDYIRKVLTQEMALSIQRDEIGAKVFMAIAEFAPAFGMFGTL
                     VGLVQMLSHMDDPSTIGRGMAVALLTTLYGVLIANLIAIPIADKLEDKRAREVALRSL
                     IIECVFQIQQQQNPTAM"
BASE COUNT          460 a          932 c         1013 g          575 t
ORIGIN      
        1 tgatctcgaa ccagtccacc ggcggctggt gttccagcac gtggtcgaaa tggaccgagc
       61 gcagcccgat gccgaacccc aggtcgggaa gccccagcct ggggccggtc atcgtcatgg
      121 tggtcgctgc ctacttggcc gaggtcggct ggatgcacga gcggcgcttg gtgccgtcgt
      181 agtcgatgtc gccgatcttc ttggtctgcg gctgcggcag cttgctggga tcgacgcccc
      241 acttggcggc catctgggtg cgggcggtgt cccacacgtt ctcgccgata aggcccttca
      301 ggcgggcctt gtcggcgtcg gaccaatcgg tctgggcgtc gatcatgggg ccggcgttga
      361 cgttgaacac ctgctgggtc gagatcggcg tctcgcagcc gcccttggcc ttgcagccgt
      421 tctggccggg gatccattcc tcggaggctg gcagcatccc gccaccgccg ccaccgccgc
      481 acaggttggt cggcttggac ggcttgccgc cgccgcacag gttggccggc ttggcggggg
      541 cgccgcagcc gttcttcttg ggcgcggccg tcttggacga gcacgcctcg ccgctcttcg
      601 acaccaggaa gccgcaaccg ccctcggcgc cgcacatgtt gttggcgccg caggtgtgga
      661 agccggcggt ggcgcaggcg ccgtcgccct tggtggtgcc caggccgccc cagcccttgc
      721 cggcgcattc gttcaggccc tggcaggcgt tggtcggcat gttcttttcc accagcagct
      781 tgcgggtgcg ggtgtcccag tggaacaggc acagcgggtc gaccacgtcc atggccgcct
      841 gcaccttctt ggcggtgacg tttttcttgt agacgaagga cgggcaatgg cccaactgcc
      901 acatcatcgg gatgacgtac ttgaacgcca tcatcgcttc cgtgaaggtc ggggccatct
      961 tgtctttgcc ggccgtcgag ttcgggttca gcgtgcccat cgagaagccg tcatgcagca
     1021 ggtcgacggt gtaggaccag atggcgttca aggaattctg caccaccttg gcgtccttgg
     1081 gggcccagct cggcaggtcc ttcgagatct tgccgtcggc ctgatagaac atcgggccgc
     1141 cgatggcggc ttcccaatcc tggctgttga gcacggcgcc gacgtcgagg aagcgctggt
     1201 agtgggtcaa ctggctggcg tcggcgaagc gcgatccggc cgaggcctgg aactgcttct
     1261 gcaccgtctg cgggcaggtc tggggaacgt cgccgctgcc ggccttcagc atggccgcgt
     1321 gcttctgctt cagcatcagc ttggcgacca cctggccctc gccctggtcg gcgatggcgt
     1381 tgatgacgtt catggcgtcc tgcggtgagg tgaccgcgtt gtaggtgtag gtcgagccga
     1441 aggtgccgta caccacctgc ttgccgccct cgaccggggt gtcgtcggcg gcgtcggcgg
     1501 ccaggccggc ggccggcttg tagacctcgg tcatcagttg ccaggtggcg tggtacagct
     1561 cggcgatcga gccgtagacg caattctcgt tgggcggcgg gtacaggctg gggtcggcct
     1621 gctcgatggc cgccatgtcg gcgatggcct ggggcaggtt gcccagttcc agcaccagcg
     1681 gcttgccgtc atggacgatg tagggaaccg tgatcttctt gccggccttc atggacagca
     1741 tgggaaggtt ggggtcgacg cccaccgaat tgcccaggtt gcaggcttcc tgcaggtggt
     1801 acatctcctg cacggccacc gacagcacgg tctgctgggc ggcgaacagc ggcggcgtcg
     1861 gcaggttgtc gccgttatag gccagcgcgt ccttggtgaa ggaataggtg gcggtcagat
     1921 aaaacggcag cgtggtgtat tcgaccgccg cgatgacctg aaggtgcttc tgcaacagcg
     1981 cgaccttgcc ggccacctga gccttggaaa cggtaactcc catcggatgt cccccttttc
     2041 atgatgttgt cgggcgatgt cattgccgcc gcaagtgaca aatcaccatt aaaattcccc
     2101 acaagcgggt actagattat tgaaccgtgg ggttcaatgg aaaaaatgtg tcggattgtg
     2161 gcgtgggcgc gcggccgcct gcgggggatg gcgccaaccc ggcgactgga ttaccattcg
     2221 ccataagcct tgcggggaag gggatggccc gcgcggggcc aacggagggg gtcaatggat
     2281 ttcgcaacgc tcgccggcat gctgatcggc atcctggtgg tgacgctggc catcatgacc
     2341 ggctcggaac tgggcatctt cctcgacctg cccagcatcc tgatcgtggt cggcggcacc
     2401 ttcgccgcgt gcatggtcaa gtttccgttc tcgggcgtgt tcgtggccat gccggtgggc
     2461 ttcaaggcgg ccttcaccaa cgaaaaggag cagccgcgcg acttcatcaa gaaggccatc
     2521 gccatctcga agctggtgcg caagtcgggc gtcgtcgccg ccgagggcgt caaggtgcgc
     2581 aacccgttct tcaagaaggg gctgcagctg gtcgccgacg gccgcgacct ggactacatc
     2641 cgcaaggtgc tgacccagga aatggcgctg tcgatccagc gcgacgagat cggcgccaag
     2701 gtgttcatgg ccatcgccga gttcgccccg gccttcggca tgttcggcac cctggtcggc
     2761 ctggtgcaga tgctgtcgca catggacgac cccagcacca tcggccgcgg catggcggtg
     2821 gcgctgctga ccacgcttta cggcgtgctg atcgccaacc tgatcgccat tcccatcgcc
     2881 gacaagctcg aggacaagcg ggcgcgcgag gtggccctgc gctcgctgat catcgaatgc
     2941 gtgttccaga tccagcagca gcagaacccc accgccatga
//
LOCUS       DATIKR010000448         3713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_176371, whole genome shotgun sequence.
ACCESSION   DATIKR010000448 DATIKR010000000
VERSION     DATIKR010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176371"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..959)
                     /locus_tag="VLL76_06995"
     CDS             complement(78..959)
                     /locus_tag="VLL76_06995"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HSV29286.1"
                     /translation="MAAAIQKIGVIGAGQMGNGIAHVCAISGFDVILLDVSEEQLKKA
                     IGTIDKNLTRQVSKGKISEADKAAALGRIKPTTQYADFGDSDLVIEAATEDEQVKRKI
                     FALLCPVLKPDAYIASNTSSISITRLGAATDRPAKFMGMHFMNPVPVMQLVELIRGIA
                     TGEETFSLVRDMVVKLGKSPVSAEDFPAFIVNRILLPMINEAVYTLYEGVGSVDSIDT
                     AMKLGANHPMGPLELADFIGLDTCLSIMQVLHDGLADTKYRPCPLLVKYVEAGWLGRK
                     TGRGFYDYSGEKPVPTR"
     gene            complement(1024..1953)
                     /locus_tag="VLL76_07000"
     CDS             complement(1024..1953)
                     /locus_tag="VLL76_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSV29287.1"
                     /translation="MSVLVIAEHESGALKPATLNTVTAAAKIGGDIHVLVAGSGVGAV
                     AEAAAKVAGIAKVLVADDAIYAHCLAEPVADLVVGLAKGYGHVLAPATTFGKNVLPRV
                     AALLDVAQLSDITAVVSPDTFVRPIYAGNALATVQSKDAIKVVTVRGTAFEAADASGG
                     SAAIENVAAAGNPGNSAFVSQQLSKSERPELTAARIIISGGRGMQSGENFHLLEKVAD
                     KLGAAVGASRAAVDAGFVPNDFQVGQTGKIVAPDLYIAVGISGAIQHLAGMKDSKVIV
                     AINKDEEAPIFQVADYGLVADLFKALPELADAI"
     gene            complement(1956..2705)
                     /locus_tag="VLL76_07005"
     CDS             complement(1956..2705)
                     /locus_tag="VLL76_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HSV29288.1"
                     /translation="MKVLVAVKRVIDYNVKIRVKADNSGVETANVKFSMNPFDEIAVE
                     EAVRLKEAGKVSEIVVVSMGPSQAQETIRTALAMGADRGILVQTDDELQPLAVAKLLK
                     AIVAKESPNLVVLGKQAIDDDSNQTGQMLAALLGWPQGTFASKVVLGDGSAEVTREVD
                     GGLETVSLKLPAIVTTDLRLNEPRYASLPNIMKAKKKPIDTLAPADLGVDTAPRLVTL
                     KVEEPAKRKAGIKVPDVATLVDKLKNEAKVI"
     gene            complement(2821..3375)
                     /locus_tag="VLL76_07010"
     CDS             complement(2821..3375)
                     /locus_tag="VLL76_07010"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HSV29289.1"
                     /translation="MVRLTKIYTRGGDKGQTSLGDGARVAKHALRVEAYGTVDEANAV
                     IGVARLATEGEADAMLARIQNDLFDLGADLCTPEGDGPRLRVAAEQVTRLENEIDAMN
                     AELSPLTSFILPGGSAASAQLHLARTVVRRAERLITALAEGEAINPQAIAYANRLSDH
                     LFVLARHLNAKGAADVLWVPVANR"
     gene            3504..>3713
                     /locus_tag="VLL76_07015"
     CDS             3504..>3713
                     /locus_tag="VLL76_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HSV29290.1"
                     /translation="MRLSPSLSLYIGRQFLTAFAGVLLVIMGLILLFDVIELIRRAAN
                     NASMGFGFVMALALFKLPQMIHTVLP"
BASE COUNT          570 a         1206 c         1252 g          685 t
ORIGIN      
        1 cccttttccg tgttccttga ccaaagaaaa gccccgcacc gggcatccgg tgcggggctg
       61 ttttcatcgc ctggcgctta gcgcgtcggc accggctttt cgccggaata gtcgtagaag
      121 cctcggccgg tcttgcggcc cagccagccg gcctcgacat acttcaccag cagcgggcag
      181 ggccggtact tggtgtcggc gaggccgtca tgcagcacct gcatgatcga caggcaggtg
      241 tcgaggccga tgaagtcggc cagttccagc gggcccatgg ggtggttggc gcccagcttc
      301 atggcggtgt cgatggaatc caccgagccg acgccttcgt acagggtgta gaccgcctcg
      361 ttgatcatcg gcagcaggat gcggttgacg atgaaggcgg ggaagtcctc ggccgaaacg
      421 gggctcttgc ccagcttcac caccatgtcg cggaccagcg agaaggtctc ctcgccggtg
      481 gcgatgccac ggatcagctc gaccagttgc atcaccggca ccgggttcat gaagtgcatg
      541 cccatgaact tggcggggcg gtcggtggcg gcgcccaggc gggtgatgga gatcgacgag
      601 gtgttcgagg cgatgtacgc gtcgggcttc agcaccgggc aaagcagggc gaagatcttg
      661 cgcttgacct gctcgtcctc ggtggcggcc tcgatcacca ggtcgctgtc gccgaaatcg
      721 gcgtattggg tggtcggctt gatgcggccc agggcggcag ccttgtcggc ctcggaaatc
      781 ttgcccttcg acacctgacg ggtcaggttc ttgtcgatgg ttccgatggc cttcttgagc
      841 tgctcttccg agacgtcgag caggatgacg tcgaagccgg aaatggcaca gacgtgagcg
      901 ataccgttgc ccatctggcc cgcgccgatg acaccgatct tctggatagc agcagccata
      961 acatgctccg ttgcttaaag cttttcgggt cctggacgtc gggccagttc ggcctcgtta
     1021 ccttcagatc gcgtcggcca actccggcaa ggccttgaac aggtccgcca ccaggccgta
     1081 atcggcgacc tggaagatcg gggcctcttc gtccttgttg atggcgacga tgaccttgga
     1141 atccttcatg ccggccagat gctggatggc gcccgagatg ccgaccgcga tgtagaggtc
     1201 gggggcgacg atcttgccgg tctggccgac ctggaagtcg ttggggacga agccggcgtc
     1261 cacggcggca cgcgaggcgc cgacggcggc gcccagcttg tcggcgacct tttccagcag
     1321 gtggaagttc tcgcccgact gcatgccgcg accgcccgag atgatgatgc gcgcggcggt
     1381 cagctcgggg cgctcggact tggacagctg ctgcgacacg aaggccgaat tgccggggtt
     1441 gccggcggcg gccacattct cgatcgcggc cgagccgccc gacgcgtcgg cggcctcgaa
     1501 ggcggtgccg cgcacggtga cgaccttgat ggcgtccttg gactgcacgg ttgccagggc
     1561 gttgccggcg tagatcggcc gcacgaaggt gtcgggcgac accacggcgg tgatgtcgga
     1621 caactgggcg acgtccagca gggcggcgac gcgcggcagc acgttcttgc cgaaggtggt
     1681 ggcgggggcc agcacgtggc cgtagccctt ggccaggccg acgaccaggt cggccaccgg
     1741 ctcggccagg caatgggcgt agatggcgtc gtcggccacc agcaccttgg cgattccggc
     1801 caccttggcg gcggcttcgg ccacggcgcc gacgccggaa ccggcgacca gcacatggat
     1861 gtcgccaccg atcttggcgg cggcggtgac ggtgttcaga gtggcgggct tgagggcgcc
     1921 ggactcatgc tcggcaatga cgagaacgga catcgtcaga tcaccttcgc ttcgttcttc
     1981 agcttgtcga ccagggtggc gacgtcggga accttgatgc cggccttgcg cttggcgggc
     2041 tcttccacct tcagcgtcac caggcgggga gcggtgtcga cgcccagatc ggccggggcc
     2101 agggtgtcga tcggcttctt cttcgccttc atgatgttcg gcagcgaagc gtagcgcggc
     2161 tcgttcaggc gcaggtcggt ggtgacgatg gccggcagct tcaggctgac ggtctcgagg
     2221 ccgccgtcga cctcgcgggt gacctcggcc gagccgtcgc ccagcaccac cttcgaggcg
     2281 aaggtgccct ggggccagcc caagagcgcc gccagcatct ggccggtctg gttggaatcg
     2341 tcgtcgatcg cctgcttgcc cagcaccacc aggttcgggc tttccttcgc cacgatggcc
     2401 ttgagcagct tggcgacggc cagcggctgc aattcgtcgt cggtctggac caggatgccg
     2461 cggtcggcgc ccatggcaag cgcggtgcgg atggtttcct gggcctggga cggccccatg
     2521 gacaccacca cgatctcgga gaccttgccg gcctccttca accgcacggc ctcttccacc
     2581 gcgatctcgt cgaacgggtt catggagaac ttcacgttcg cggtctcgac gccggaattg
     2641 tcggccttga cccggatttt gacgttgtag tcaatgacgc gcttgacggc gaccagtacc
     2701 ttcatggtcc tccaaatcct tctataccgg cggggggcga ttaaatcggt attgccgggc
     2761 ggatttcagt attgcatcgc acaatattcc gcccgtttga tgatgtcaac gacacccgcg
     2821 tcagcggttt gcgaccggaa cccacagcac gtcggccgcg cccttggcgt tgaggtggcg
     2881 cgccagcacg aacaggtggt cggacaggcg gttggcatag gcgatcgcct gcgggttgat
     2941 cgcctcgcct tccgccaacg cggtgatcag gcgctcggcc cggcgcacca cggtgcgggc
     3001 caggtgcagt tgcgccgacg ccgccgagcc gcccggcagg atgaacgagg tcagcggcga
     3061 cagctcggcg ttcatggcgt cgatctcgtt ttccaggcgg gtcacctgct cggccgcgac
     3121 gcgcaggcgg gggccgtcac cttcgggggt gcacagatcg gcgcccaggt cgaacaggtc
     3181 gttctggatg cgggccagca tggcgtcggc ctcgccctcg gtggccaggc gagcgacgcc
     3241 gatcaccgcg ttggcttcgt ccacggtgcc gtaggcctcg accctgagcg cgtgcttggc
     3301 cacccgcgcg ccgtcgccca ggctggtctg ccccttgtcg ccgcccctgg tgtagatctt
     3361 ggtcagccgg accatgccct atcctccttg ccgcccgaaa gcgccctgtt atgccacggc
     3421 ggatcgggcg ataacagcgc ggcccttccc cacgccgccg aacgcactat aatccccccc
     3481 agccaaaacc cggacccatc cccatgcgcc tgtcgcccag cctcagcctt tacatcggcc
     3541 gccagttcct gacggccttc gcgggcgtgc tgctggtcat catggggctg atcctgttgt
     3601 tcgacgtgat cgagctgatc cgccgcgccg ccaacaacgc cagcatgggc tttggtttcg
     3661 tcatggcgct ggcgttgttc aagctgcccc agatgatcca cacggtgctg ccc
//
LOCUS       DATIKR010000449         2616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_67556, whole genome shotgun sequence.
ACCESSION   DATIKR010000449 DATIKR010000000
VERSION     DATIKR010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67556"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1285)
                     /locus_tag="VLL76_07020"
     CDS             complement(<1..1285)
                     /locus_tag="VLL76_07020"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSV29291.1"
                     /translation="MLNVILLEACGQLFGIDAGRVVQVVDPPQVTQVPFLPPHVDGLV
                     NVGGGVVVSVDLAAALGRQCEIKSGVSMVVRAGQGEFVLRVGRVLMMVPVDESRLHPV
                     APRQDGSAVVSGEFDWQGRMVLMIDPDRFELGEVDLESGGPGPDVFALAGAGEPAAKV
                     ADNRLPWLIVEVSGERYALDVRRITEVVEADSFLPVPKAPSQVLGYHSLRGAPLLVTS
                     LAHLLEVAPGPVRHVVVVDSPAGPLGLGVARVVGIRAFDADSAEDVSDSTGAVAGCLV
                     DADGSMLAILDLAHTLTPDTLDALAEYMPKGEGHAISAFGGGGTRRLLTFWLGEELCG
                     IDLDAVSRVAEVQGWSDLPAEAGTQLTGVTQIGNEVMPLIDLRDRRGIANKAPAMAQV
                     VARADGGACALAVDRMHRIIDLSIDDIRAVDDGGSD"
     gene            complement(1300..2181)
                     /locus_tag="VLL76_07025"
     CDS             complement(1300..2181)
                     /locus_tag="VLL76_07025"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HSV29292.1"
                     /translation="MTVNECPDTDEFDRLAHLVQQVTGWRDSPAFRGKLKMILGGDDE
                     DTASTWLRRLGRRHVGCGEWQMVIERLMVPETFFFRDGPQLDVLRYRVLPEIIERKRR
                     SNRTIRLWSAGCSSGEEPYTLAMLTLDALMAAGEATELPGVGIVLNAGWVVHVQGTDL
                     NPKIVEKARVGLYSDFGLSPFRETPPEFRRFFVKHDSSETISRFGLRRDVRSVTSFGI
                     HNLKEAATGSDFDLVSCRNVLIYFDDDSKAAALEHLTQAVGGSGFLMLGPTDPFDRLY
                     GFQLIEPKTSPILAKSF"
     gene            complement(2233..>2616)
                     /locus_tag="VLL76_07030"
     CDS             complement(2233..>2616)
                     /locus_tag="VLL76_07030"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29293.1"
                     /translation="VHGKGFAVVAEEVRKLAEHSANSVQQITELVEHAAREADRSLEM
                     VTAVNGDMEAIAESVRQTDGLIQGIAAAMTQQSSSVEEINANVKNLSKIGETNATASE
                     EITATMVELARLADQTRRQMQQFTI"
BASE COUNT          429 a          902 c          879 g          406 t
ORIGIN      
        1 tgtcggagcc gccatcgtcc accgcgcgga tgtcgtcgat gctgaggtcg atgatccggt
       61 gcatgcggtc caccgccagc gcacacgcgc cgccgtcggc gcgagccacc acctgggcca
      121 tggccggcgc cttgttggcg atgccgcggc ggtcgcgcag gtcgatcagc ggcatgacct
      181 cgttgccgat ctgggtgacg ccggtcagtt gcgtccccgc ttcggccggc aggtcgctcc
      241 agccctggac ctccgcgacc ctggacaccg catccaggtc gatgccgcac aattcctcgc
      301 ccagccagaa ggtcagcagc cgacgcgtcc cgccgccgcc gaaggcgctg atggcatggc
      361 cttcgccctt gggcatgtac tcggccaggg cgtccaaggt gtcgggcgtc agggtgtggg
      421 cgagatcgag gatcgccagc atggagccat cggcatccac cagacatccc gcgaccgcgc
      481 cggtggaatc cgagacgtcc tcggcactgt cggcgtcgaa ggcgcggatg cccaccaccc
      541 ttgcgacgcc cagaccaagc ggcccggcgg gactgtccac caccaccaca tggcggacgg
      601 gaccgggcgc cacctcaagc agatgggcca gcgaggtcac cagcaggggc gcgccacgga
      661 gcgaatggta gcccagcacc tgagaggggg ccttgggcac cggcaggaag ctgtcggcct
      721 cgaccacctc ggtgatgcgg cggacgtcga gggcgtagcg ctcgcccgag acctcgacga
      781 tcagccaggg cagcctgttg tcggccacct tcgccgccgg ctcgcccgcg ccggcaaggg
      841 cgaagacgtc cggccccggc ccgccggact ccagatccac ctcgcccagt tcgaagcggt
      901 cggggtcgat catcagcacc atgcggccct gccagtcgaa ctcgccggac accacggccg
      961 aaccatcctg gcgcggcgcg accggatgca accggctttc gtccaccggc accatcatca
     1021 gcacccgccc gacccgcagg acgaactcgc cctgcccggc gcggaccacc atgctgacgc
     1081 cggatttgat ttcgcattgg cggccaaggg cggcggccag gtccaccgac accaccacgc
     1141 cgccgccgac gttgaccagc ccgtccacat ggggcggcag gaacggcacc tgggtgacct
     1201 ggggcggatc gaccacctgg accacgcggc cggcatcgat accgaataat tggccgcagg
     1261 cttcgagcag gatgacgttg agcatggcgc tccctccgct cagaagcttt tggccaggat
     1321 gggcgaggtc ttgggctcga tcagttggaa gccgtaaagg cggtcgaacg gatcggtcgg
     1381 ccccagcatc agaaagccgc tgccgcccac cgcctgggtc aggtgctcga gggcggcggc
     1441 cttgctgtcg tcgtcgaaat agatcagcac gttgcggcaa ctgaccaggt cgaagtccga
     1501 gccggtggcc gcttccttga gattgtggat accgaacgag gtgaccgaac ggacgtcgcg
     1561 gcgcaggccg aagcgggaaa tggtctcgct gctgtcgtgc ttgacgaaga agcggcggaa
     1621 ctcgggcggc gtctcgcgga aggggctgag cccgaaatcg gaatacagcc cgacgcgcgc
     1681 cttctcgacg atcttgggat tgaggtcggt gccctggaca tggaccaccc agccggcatt
     1741 gaggacgatc cccaccccgg gcagctcggt ggcctcgccg gccgccatca gcgcgtccag
     1801 cgtcagcatc gccagggtat agggttcctc gccgctggag cagcccgccg accacagccg
     1861 gatggtgcgg ttgctccgcc gcttgcgctc gatgatctcg ggcaggacgc ggtagcgcag
     1921 cacgtccaac tgggggccgt cgcggaagaa gaaggtctcg ggcaccatca ggcgctcgat
     1981 caccatctgc cattcgccgc agcccacatg acggcggccc aggcggcgga gccaggtgga
     2041 cgcggtgtcc tcgtcgtcgc cgcccaggat catcttcagc ttgccccgga aggccgggct
     2101 gtcgcgccag ccggtgacct gttggaccag atgggccagg cggtcgaact cgtcggtgtc
     2161 ggggcattcg ttgacggtca cggcagcacc gtaagtttca cccaagccat acatggcacc
     2221 ctcctcgcga catcagatcg tgaactgctg catttggcgg cgggtctggt ccgccaagcg
     2281 ggcgagttcg accatggtcg cggtgatctc ctcggacgcg gtcgcgttgg tctcaccgat
     2341 cttggacagg ttcttgacgt tggcgttgat ctcctcgacc gagctggatt gctgggtcat
     2401 ggcggcggcg atgccctgaa tcaggccgtc ggtctggcgc acgctctcgg cgatggcctc
     2461 catgtcgccg ttgacggcgg tgaccatttc cagcgaacga tcggcctcgc gggcggcgtg
     2521 ctcgaccagt tcggtgatct gctgcaccga attggcggag tgctcggcca gcttgcgcac
     2581 ctcctcggcc accaccgcaa agcccttgcc atgcac
//
LOCUS       DATIKR010000450         3348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_212654, whole genome shotgun sequence.
ACCESSION   DATIKR010000450 DATIKR010000000
VERSION     DATIKR010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3348
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212654"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2471)
                     /locus_tag="VLL76_07035"
     CDS             complement(<1..2471)
                     /locus_tag="VLL76_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV29294.1"
                     /translation="MLEEYIGQPGRIGLGGVPEGVDARLIGDLARGGQAGDVLVIARD
                     DGRMARLSEALAFFAPDVEVLELPGWDCVPYDRVSPNVDVVARRIDSLAILAQGKGER
                     PRVVLTTIAAALQRLPPVESLSKATFLARKGGRVDIDELLSFLNRNGYARSDTVMEPG
                     EYAVRGGIVDLYPPGLPEPVRLDFFGDELETIRSFDPMSQRTTGTLAQFSLKPVSEVT
                     LDDAAIARFRTGYREMFGLVQSADPLYEAISSGMKFNGMEHWLPLFHDGLDTLFAYVP
                     EATLVLDHQVEEAREARWGLILEYYDARRTLTGAGLTESGMIYNPVPPPSLFLEQEEW
                     DRLTAFRTTLLLSPFNVPEAVNRAVDVGARPSRDFGDVRAMPGGNVYEVAREYLDAEM
                     KSGQRAVVAAWTAGSRDRLTHLLTDHGIKAEAVDSWEEAEKLAKGRVALVVLGLDHGF
                     VSPGLTLITEQDLLGDRLARPARKKKKGSQFIAEASALSEGDLVVHVEHGIGRYDGLV
                     ALEVGGAPHDCLRVLYDGGDKLFVPVENIDVLTRFGSEQSGVQLDKLGGVAWQSRKAK
                     LKKRIRDIAEHLIAIAAQRQLRKADTLAPPEGLWDEFCARFPYVETDDQLRAIEDTIA
                     DLSSGKPMDRLVCGDVGFGKTEVAMRAAFVAAMAGLQVAVVVPTTLLARQHYRNFAER
                     FKGLPIKVEQLSRLVTAKHASEVKKGVTDGSVDIVVGTHALLAKGIAFKRLGLLIIDE
                     EQHFGVAHKERLKQLKADVHVLTLTATPIPRTLQMALTGVKEMSVIATPPVDRLAVRT
                     FVLPYDPVVIREAILRERYRGGQVF"
     gene            complement(2474..2713)
                     /locus_tag="VLL76_07040"
     CDS             complement(2474..2713)
                     /locus_tag="VLL76_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HSV29295.1"
                     /translation="MFRAHHMGSNENDILFGGFAERYLASLAPEQVDRFEALIQETDT
                     DLFNWVTGKEPVPAHLDHDVMAMMKKFVKTEAART"
     gene            2824..>3348
                     /locus_tag="VLL76_07045"
     CDS             2824..>3348
                     /locus_tag="VLL76_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HSV29296.1"
                     /translation="MRPDVLFPLFAPVTTLPGVGPKLAPLYERLAGPKVLDMVWHLPS
                     GVVDRRYCPKVREALPGKVATLVVQIDAHMPSGSPKRPYRVRCSDETGFLHLVFFHAH
                     EDWLKRSLPVGEVRVVSGVVEHFNNEIQITHPDHVVPLADQDQVMTIEPVYPLTGGLT
                     AKPVARTVRAALDRT"
BASE COUNT          545 a         1138 c         1094 g          571 t
ORIGIN      
        1 tagaacacct ggccgccgcg atagcgctcg cgcaggatcg cctcgcggat caccaccggg
       61 tcgtagggca gcacgaaggt gcgcaccgcc aggcggtcca ccggcggggt ggcgatgacg
      121 ctcatctcct tcacgccggt caacgccatc tgcagcgtgc gcgggattgg cgtggcggtc
      181 agggtcagca cgtggacgtc ggccttgagc tgcttcagcc gctccttgtg ggcgacgccg
      241 aaatgctgct cctcgtcgat gatcaacagg cccaggcgct tgaaggcgat gcccttggcc
      301 agcagcgcgt gggtgccgac gacgatgtcc acggacccgt cggtcacgcc cttcttgacc
      361 tcggaagcat gtttggcggt gaccaggcgc gacaattgct cgaccttgat gggcaggcct
      421 ttgaagcgct cggcgaaatt gcggtaatgc tggcgcgcca acagcgtggt cggcaccacc
      481 acggccacct gcaggccggc catggcggcg acgaaggcgg cgcgcatggc gacttctgtc
      541 tttccgaagc cgacgtcgcc gcacaccagg cggtccatgg gcttgcccga ggacagatcg
      601 gcgatggtgt cctcgatggc gcgcaactgg tcgtcggtct cgacataggg gaagcgggcg
      661 cagaattcgt cccacaaccc ttccggcgga gccagggtgt cggccttgcg caactggcgt
      721 tgcgcggcga tggcgatcag atgctcggcg atgtcgcgga tgcgcttctt gagcttggcc
      781 ttgcgcgact gccacgcgac gccgcccagc ttgtccagtt ggacgccgct ttgttccgag
      841 ccgaagcggg tgagcacgtc gatgttctcg accggcacga acagcttgtc gccgccgtca
      901 tacagcaccc gcaggcagtc atgcggcgcg ccgccgacct ccagcgctac caagccgtca
      961 tagcggccga tgccgtgctc cacatggacg accaagtcac cctcggacaa ggccgaggcc
     1021 tcggcgatga actgcgaacc ctttttcttc ttgcgcgccg gccgggccag gcggtcgccc
     1081 agcagatcct gctcggtaat cagcgtcaac ccggggctga caaagccgtg gtcgagcccc
     1141 agcaccacca gggccacccg ccccttcgcc agcttttccg cctcttccca actatccacg
     1201 gcctcggcct tgatgccatg gtcggtcagc agatgggtca ggcgatcacg cgagccggcg
     1261 gtccaggcgg cgacgacggc gcgctgcccg gacttcattt cggcgtcgag atattcccgc
     1321 gcgacctcat agacgttgcc gcccggcatg gcgcgcacgt cgccgaagtc ccggctgggg
     1381 cgggcaccga cgtcaaccgc ccggttgaca gcctcgggca cattgaatgg cgacagcagc
     1441 aaggtggtac gaaacgcggt caggcggtcc cattcctcct gctccaggaa caggctgggc
     1501 ggcgggaccg ggttgtagat catgcccgat tcggtcaggc cggcgccggt cagggtgcgg
     1561 cgcgcgtcgt aatattccag aatcaggccc cagcgcgcct cgcgcgcctc ctccacctga
     1621 tggtccagca ccagggtggc ctcggggaca taggcgaaca gggtgtcgag gccgtcatgg
     1681 aacagcggca gccagtgctc catgccgttg aacttcattc ccgacgagat cgcctcgtac
     1741 agcgggtcgg ccgactgcac caggccgaac atctcgcgat agccggtgcg gaagcgcgcg
     1801 atggctgcgt cgtccagcgt cacctcgctg accggcttca gcgagaattg cgccagcgtg
     1861 ccggtggtgc gctggctcat ggggtcgaag ctgcggatgg tttccagttc gtcgccgaag
     1921 aaatccagcc ggaccggctc gggcaggccc ggcgggtaca ggtcgacgat gccgccgcgc
     1981 acggcgtact cgcccggctc catcaccgtg tcggagcggg cgtaaccgtt acgattgagg
     2041 aacgacagca attcgtcgat gtcgacccgg ccgcccttcc ttgccaaaaa ggtcgccttg
     2101 gaaaggcttt ccactggcgg caggcgctgc aacgccgcgg cgatggtggt cagcaccacg
     2161 cggggccgct cgcccttgcc ctgggccagg atcgccaggc tgtcgatgcg ccgcgccacc
     2221 acgtccacgt tgggcgacac ccggtcatag ggcacgcaat cccagccggg aagctccagc
     2281 acctcgacgt cgggggcgaa gaaggccagc gcttcggaca gtcgcgccat gcggccgtcg
     2341 tcgcgggcaa tgaccagcac gtcgccggcc tggccgccgc gggcaaggtc gccgatcagg
     2401 cgggcgtcga cgccctcggg cacgccgcca aggccgatgc ggcccggctg gccgatatat
     2461 tcctcaagca ttttcaagtg cgtgcggctt ctgtcttcac gaacttcttc atcattgcca
     2521 tgacgtcatg gtcgagatga gctggcaccg gctccttgcc ggtgacccag ttgaacaggt
     2581 cggtgtccgt ctcctggatc agcgcctcga agcggtccac ctgctcgggg gccaagctcg
     2641 ccagatagcg ctcggcgaag ccgccgaaca ggatgtcgtt ttcgttcgaa cccatgtggt
     2701 gagcccggaa catcagtctt ttcagtcgtg catccatcgc gtgggcattg cgtccaatct
     2761 cgggaggcct aggatataga accttaccgc cctcctgtca gccaccaagc gcgccgatcc
     2821 tccatgcgtc ccgatgtcct gttcccgttg ttcgcgccgg tcaccaccct gcccggcgtc
     2881 ggccccaagc tggcgccgct atacgagcgc cttgccggcc ccaaggtgct ggatatggtg
     2941 tggcacctgc cgtccggcgt ggtggaccgc cgttattgcc ccaaggtgcg cgaggcgctg
     3001 ccgggcaagg tggcgaccct ggtggtgcag atcgacgccc acatgccctc gggcagcccc
     3061 aagcggccct atcgcgtgcg ctgctcggac gagaccgggt tcctgcatct ggtgttcttc
     3121 catgcccacg aggattggct gaagcggtcg ctgcccgtgg gcgaggtgcg ggtcgtcagc
     3181 ggcgtggtcg agcatttcaa caacgaaatc cagatcaccc atcccgacca tgtcgttccg
     3241 ctggccgacc aggaccaggt catgaccatc gagccggtgt acccgttaac cggcgggttg
     3301 acggccaagc cggttgcccg caccgtccgc gccgcgctgg accgaacc
//
LOCUS       DATIKR010000451         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_54845, whole genome shotgun sequence.
ACCESSION   DATIKR010000451 DATIKR010000000
VERSION     DATIKR010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54845"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..133
                     /locus_tag="VLL76_07050"
     CDS             11..133
                     /locus_tag="VLL76_07050"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29297.1"
                     /translation="MPLARSFAELHHGSLAVASKPGQGTMVTVRLPMAPALEPV"
     gene            complement(130..756)
                     /locus_tag="VLL76_07055"
     CDS             complement(130..756)
                     /locus_tag="VLL76_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HSV29298.1"
                     /translation="MKDKLIQAKEQWARVGRALTGSHGHDRLPPGQRLVGDWPVLDLG
                     ITPNVTPKDWSLTVAGAVEAPLKWSWDDFMALPQVESTSDIHCVTTWSRYDNQWRGVA
                     VRTLLEAARPKATARFVMLKSFDGYSTNVPLADFASEDALLAHSWQGEALTAEHGGPV
                     RMVIPKLYFWKSAKWLRAITFMEQDSPGYWEVRGYHDVGDPWKEERYR"
     gene            complement(779..1240)
                     /gene="smpB"
                     /locus_tag="VLL76_07060"
     CDS             complement(779..1240)
                     /gene="smpB"
                     /locus_tag="VLL76_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HSV29299.1"
                     /translation="MSLPAHIAAQNRKARHDYTIVDTIEAGIMLVGTEVKSLRAGKGN
                     INEAFAGPNGDELWLYNAYIPEYQSSMPFPHETRRPRKLLLHRREMRKLVGAIAKEGM
                     TIVPLDIHFNDRGMAKVLLGLAKGRKAHDRREAIKQRDWNREKARVMRDKG"
     gene            complement(1248..>1869)
                     /gene="dapA"
                     /locus_tag="VLL76_07065"
     CDS             complement(1248..>1869)
                     /gene="dapA"
                     /locus_tag="VLL76_07065"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HSV29300.1"
                     /translation="IALTRHAKEAGADAALVVAPYYNKPTQEGLFRHYEAISKAVDIP
                     IVVYNIPGRSVIDIGAETMARIAALPTVVGVKDATGDLSRPLKMRTLVGDKFCQLSGD
                     DATATAFLAQGGVGCISVTSNVAPRMCAQMHDAWIAGDLKTCFALRDKLMALHDVMFC
                     ETNPSVPKYMASLLGKCTPDVRLPLMPLSDASKPKVEAAMKAVGLI"
BASE COUNT          271 a          615 c          652 g          331 t
ORIGIN      
        1 cggcctgggc ctgccgctgg cgcgctcctt cgccgaactg caccacggca gcctggcggt
       61 cgccagcaag ccggggcagg gcaccatggt caccgtccgc ctgccgatgg cgccggcgct
      121 ggagccggtc taacggtagc gctcttcctt ccacgggtcg ccgacgtcgt ggtagccgcg
      181 cacttcccaa tagccggggc tgtcctgctc catgaaggtg atggcgcgca gccacttggc
      241 gcttttccag aaatacagct tggggatcac catgcggacc gggccgccat gctcggcggt
      301 caacgcctcg ccctgccagg aatgggccag cagcgcgtcc tcggaggcga aatcggccaa
      361 tggcacgttg gtggaatagc cgtcaaagct cttcagcatg acgaagcggg cggtggcctt
      421 gggccgcgcc gcctccagca gggtgcggac cgcgacgccg cgccattggt tgtcgtagcg
      481 cgaccaggtg gtgacgcaat ggatgtcgct ggtgctttcg acctgcggca gcgccatgaa
      541 gtcgtcccac gaccatttca gcggcgcctc gacggcgccg gccaccgtca gcgaccaatc
      601 cttgggggtg acgttgggcg taatgcccag atcgagcacc ggccagtcgc cgaccagccg
      661 ctgtcccggc ggcagacggt catggccatg actgccggtc agggcgcggc cgacgcgcgc
      721 ccattgctcc ttggcctgga tcagcttgtc cttcatgggg cctccctggg gggagcgatc
      781 agcccttgtc ccgcatgacg cgggccttct cgcggttcca gtcgcgctgc ttgatcgcct
      841 cgcggcggtc gtgggccttg cggcccttgg ccaggcccag cagcaccttg gccatgccgc
      901 ggtcgttgaa gtggatgtcc agcggcacga tggtcatgcc ttccttggcg atggcgccga
      961 ccagcttgcg catctcgcgg cggtgcagca gcagcttgcg cggccgccgc gtctcgtgcg
     1021 ggaacggcat gctggactgg tattccggga tgtaggcgtt gtacagccac aattcatccc
     1081 cgttggggcc ggcaaaggct tcgttgatgt tgcctttgcc ggcccgcagg gacttcacct
     1141 cggtgcccac cagcatgatg ccggcctcga tggtgtccac gatggtgtag tcgtggcggg
     1201 ccttgcggtt ctgcgcggcg atgtgggcgg gcagcgacat ggatgcgtca gatcaggccg
     1261 acggccttca tcgcggcctc gaccttgggc ttggacgcgt ccgacagcgg catcaacggc
     1321 aggcgcacgt ccggggtgca cttgcccagc agcgacgcca tgtatttcgg caccgacggg
     1381 ttggtctcgc agaacatcac gtcgtgcagc gccatcagct tgtcgcgcag cgcgaagcag
     1441 gtcttgaggt cgcccgcgat ccaggcatcg tgcatctggg cgcacatcct gggggcgacg
     1501 ttcgaagtca ccgagatgca gcccacgccg ccctgggcca ggaaggcggt ggcggtggcg
     1561 tcgtcgcccg acaactggca gaacttgtcg cccaccaggg tgcgcatctt cagcggccgc
     1621 gacaggtcgc cggtggcgtc cttgacgccg acgacggtcg gcagggcggc gatgcgcgcc
     1681 atggtctcgg cgccgatgtc gatcaccgag cggccgggga tgttgtagac cacgatcgga
     1741 atgtcgaccg ccttcgagat cgcctcgtaa tggcggaaca ggccttcctg ggtcggcttg
     1801 ttgtaatagg gcgcgaccac cagggcggcg tcggcgccgg cctccttggc atggcgggtc
     1861 agcgcgatg
//
LOCUS       DATIKR010000452         2824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_163909, whole genome shotgun sequence.
ACCESSION   DATIKR010000452 DATIKR010000000
VERSION     DATIKR010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163909"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="VLL76_07070"
     CDS             complement(<1..773)
                     /locus_tag="VLL76_07070"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HSV29301.1"
                     /translation="MASPALSRRRFIAIAACAAALSPAIARAAGTPRVRWLGKALGAK
                     AEIVLEHPDEAVAREALAEALAEVERLEAVLSLYRPDSALARLNRDGALAAPPADLVR
                     VLGEAANIARLSDGAFDVTIQPLWALHADSLRQSGRLPSSAQVDAVRKLVDWRALTVS
                     PDRIAFARPGMAATLNGIGQGYVTDRVAELLKRKGFANVLVDLGEPRVLGPRADGTAW
                     PVSIRDPMLRGVALHRFEIADGAMATTEALGSSFPGFGR"
     gene            complement(766..1302)
                     /locus_tag="VLL76_07075"
     CDS             complement(766..1302)
                     /locus_tag="VLL76_07075"
                     /inference="COORDINATES: protein motif:HMM:NF017394.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HSV29302.1"
                     /translation="MRLRNLIASALVALAVSACGEDKVAALPPPQEPGPNAIGTVCRM
                     SLSEHTGPKGQVFVRSQDAPLWFSSVRDTFTWLLVDDGAGKNFAAIYVNDMARASNWA
                     KPEAGAWVDARKAHYVVGSTKGADMGGSELVPFSGRADADAFAQAHGGIVVSFDKITR
                     DLLMKTDQPAPHGGGHHG"
     gene            complement(1299..2123)
                     /locus_tag="VLL76_07080"
     CDS             complement(1299..2123)
                     /locus_tag="VLL76_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV29303.1"
                     /translation="MNAVLVIAAKEIRDGFRNRWIIGATLVLAALAFALALLGSTPTG
                     TLAVKPLAVTVVSLASLSIFLLPLIALLLAYDTVVGEVERGTMLLLLTYPVTRNQFLL
                     GKMLGHCAILALATVIGYGGAGLAVGLGQGGDAESWGAFALLLGTSVMLGAAFVAMAT
                     LASLLVRERGTAAGISVAIWLLFVVVFDLGMLGLLVAGNDLLPTAAFGWLLMLNPADV
                     YRLANLTGFDNVRIFSGMAGAAAELAFPPNVLLAVLAAWVAAPMAAALLIFRRREL"
     gene            complement(2120..>2824)
                     /locus_tag="VLL76_07085"
     CDS             complement(2120..>2824)
                     /locus_tag="VLL76_07085"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29304.1"
                     /translation="GAALDFRRHLGFLPENVAFHDEMTGRDTLVFLARLKGEVPKVCD
                     PLLERVGLTHAARRRVKTYSKGMRQRLGLAQALLGQPRILLLDEPTTGLDPVLRMEFF
                     DILADLRKGGTTVVLSSHILTELEARTELVAIMRQGRLAAWGTLPQLRDAAAMPIRIR
                     LVTPGTAKTVAGRLGGLDVTHVNDHHLDLTCVQADKMAVLRHIAGLDVAVEDMDIRLP
                     TLDDVYLHFGHGETRT"
BASE COUNT          483 a          962 c         1006 g          373 t
ORIGIN      
        1 taacggccga agccggggaa cgacgacccc agggcctcgg tggtggccat ggcgccgtcg
       61 gcgatctcga accgatgcaa tgcgaccccg cgcagcatgg gatcgcggat ggataccggc
      121 cacgccgtgc catcggcgcg cggccccagc acgcggggtt cgcccaggtc caccagcacg
      181 ttggcgaaac ccttccgctt cagaagttcc gccacccggt cggtaacgta gccctggccg
      241 atgccgttga gcgtggccgc catgccggga cgggcgaaag cgatgcgatc aggggagacc
      301 gtgagcgccc gccagtccac cagcttgcgg acggcatcga cctgcgccga cgaaggcaac
      361 cggccggatt gccgcaaact gtcggcgtgc agcgcccaca gcggctggat ggtgacgtcg
      421 aaggcgccgt cggacaggcg ggcgatgttg gcggcctcgc ccagcacccg caccaggtcg
      481 gcagggggcg ccgccagggc gccgtcgcgg ttgaggcggg ccagcgccga atcgggacgg
      541 tacaggctga gcaccgcctc aagccgttcc acttcggcaa gcgcttcggc aagggcttcg
      601 cgggcgacgg cctcatcggg atgctcgagg acgatctcgg ccttggcgcc cagggccttg
      661 cccaaccagc gcacacgcgg agtcccggcg gcacgggcga tggcggggga caaggcggcg
      721 gcgcaggcgg cgatggcgat gaagcgccgc cgcgacaatg cggggctagc catgatgccc
      781 tccgccgtga ggagccggct ggtcggtctt catcagcagg tcgcgggtga tcttgtcgaa
      841 gctcaccacg atgccgccat gcgcctgggc gaaggcatcg gcgtcggcgc ggcccgagaa
      901 cggcaccagc tctgacccgc ccatatccgc gcccttggtg ctgccgacca cgtaatgggc
      961 cttgcgcgca tcgacccagg cgcccgcctc gggcttggcc cagttgctcg cgcgagccat
     1021 gtcgttgacg tagatggcgg cgaagttctt gcccgcaccg tcgtccacca gcagccaggt
     1081 gaaggtgtcc cgcaccgacg agaaccacaa cggcgcgtct tggctgcgca cgaacacctg
     1141 gcccttgggg ccggtgtgct cggacagcga catgcgacag acggtgccga tggcgttggg
     1201 gccaggttcc tggggcggcg gcagggcggc gaccttgtcc tcgccgcagg ccgacacggc
     1261 gagcgcgacc agggccgagg cgatcaggtt tctcagtctc ataattcgcg cctccggaag
     1321 atcagtaggg cggccgccat cggcgcggcc acccacgcgg ccaggaccgc cagcagcacg
     1381 ttggggggaa aagccagttc ggccgccgcg ccggccatgc ccgagaagat gcggacgttg
     1441 tcgaagccgg tcaggttggc gaggcggtag acgtcggccg ggttcagcat cagcagccag
     1501 ccgaaggcgg cagtcggcag aaggtcgttg ccggcgacca gcaggcccag catccccagg
     1561 tcgaacacca ccacgaacag cagccagatg gcgaccgaga tgccggccgc ggtgccgcgt
     1621 tcacgcacca ggagactggc gagcgtcgcc atggcgacga aggccgcgcc cagcatcacc
     1681 gacgtcccca gcagcagggc gaacgccccc cagctttcgg catcgccccc ctgcccgaga
     1741 ccgaccgcaa ggccggcacc gccatagccg atcaccgtcg ccagcgccag gatggcgcaa
     1801 tggccgagca tcttgccgag cagaaactgg ttgcgggtga ccggataggt cagcagcagc
     1861 agcatggtgc cgcgctcgac ctcgccgacc accgtgtcat aggccagcag cagcgcgatc
     1921 agcggcagca ggaagatgga caggctggca aggctgacca ccgtcaccgc cagcggcttc
     1981 accgccagcg tgccggtggg cgtcgagccc agcagcgcca gcgcgaacgc caaggcggcc
     2041 agcaccaagg tggcgccgat gatccaacga ttgcggaagc cgtcgcggat ttctttggcg
     2101 gcaatcacca ggacggcgtt catgtccgcg tctccccgtg gccgaagtga agatagacgt
     2161 cgtccagcgt gggcaggcgg atgtccatgt cctccaccgc gacgtcgagg ccggcgatgt
     2221 ggcgcagcac cgccatcttg tcggcctgca cgcaggtcaa atcgaggtgg tggtcgttga
     2281 cgtgggtgac gtccagcccg cccaaccggc cggccaccgt tttggcagta ccgggcgtga
     2341 ccaagcggat gcggatgggc atggcggcgg catcgcgcag ttgcggcagg gtgccccagg
     2401 cggccagccg gccctggcgc atgatggcga ccagttcggt tcgggcttcc aactcggtca
     2461 ggatgtgcga cgacagcacc acggtggtgc cgcccttgcg caggtcggcc aggatgtcga
     2521 agaattccat gcgcagcacc gggtcaaggc cggtcgtcgg ctcgtccagc agcaggatgc
     2581 ggggttgccc cagcagcgcc tgggcgaggc ccagccgctg gcgcatgccc ttggaatagg
     2641 tcttcacccg ccgccgggcc gcgtgggtca ggccgacccg ctccagcagc gggtcgcaca
     2701 ccttgggcac ctcgcccttc aggcgggcca aaaagaccag ggtgtcgcgg ccggtcatct
     2761 cgtcgtggaa ggccacgttc tcgggcagga agccgagatg gcggcggaaa tcgagggcgg
     2821 cgcc
//
LOCUS       DATIKR010000453         2444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_54879, whole genome shotgun sequence.
ACCESSION   DATIKR010000453 DATIKR010000000
VERSION     DATIKR010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54879"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..688
                     /locus_tag="VLL76_07090"
     CDS             <1..688
                     /locus_tag="VLL76_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012374853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flotillin domain-containing protein"
                     /protein_id="HSV29305.1"
                     /translation="ADLSYDLQKYKTGQLVKAEEVQVSIIEKEKQIDLQEQEIKRKQR
                     ELEATVQRPADAERYKVETLANARKFQLETEATGAAAAAKAEGFARADVQKATGLAEA
                     EANKARGLAEAAVIEAQGKANAEATRLKAEAFQKYNEAAVIELLVKVLPDLAGKIAEP
                     LAKTEKIVIINSGAGPGGGASKLTGDIAQILAQLPPVLESLTGVKLEKLIEQVPALRN
                     ATGKSDHKPS"
     gene            1105..2430
                     /locus_tag="VLL76_07095"
     CDS             1105..2430
                     /locus_tag="VLL76_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006634201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HSV29306.1"
                     /translation="MTQPSGSVELARGSTSAAHPLILAAMHPLFTGLLGLAVFLALAW
                     ALSLDRKRFPWRTVACGLALQFTFGFLILKTGPGRTVFAFFNDAVTTFIGFADRGTAM
                     VFGPLASAPALEQSFGAGNGFIFAVVVLGTIILVSAVSSFLYHYGILQLVVRGAAWVM
                     RRVMRTSGSESLSAAANIFMGQTEAPLVIKPYLPRMTRSELLAMMTGGMATIAGGVLA
                     VYARLGVTAGDLLTASVMNAPAGLLIAKILLPETERSETAGAAKADVPRTTVNGIDAL
                     CVGAADGLKLALNVCAMLIAFVAVVHLANFLLAAPQQWAGATAPVTLQTLLGWINTPF
                     AWLMGVPARDSALVGQVLGERIVLNEFVGYLSLTSEAVRPRIEERSFRIAVYAICGFA
                     NFASVAIQIGGISALVPERRADLASLGLRAMLGGLLACYLTATLAGMLL"
BASE COUNT          401 a          837 c          801 g          405 t
ORIGIN      
        1 ggccgacctc tcctacgacc tccagaaata caagaccggc cagctcgtga aggccgagga
       61 ggtgcaggtc agcatcatcg agaaggagaa gcagatcgat ctgcaggagc aggaaataaa
      121 acgcaaacag cgcgaactcg aggccaccgt gcagcggccc gccgacgccg agcgttacaa
      181 ggtcgagacg ctggccaacg cgaggaaatt ccagctcgaa accgaggcca ccggcgccgc
      241 cgccgccgcc aaggccgagg gcttcgcccg cgccgacgtg cagaaggcca ccggcctcgc
      301 cgaagccgag gccaacaagg cgcgcggcct ggccgaggcc gccgtcatcg aggcgcaggg
      361 caaggcgaac gccgaggcca cccgcctcaa ggccgaggcc ttccaaaaat acaacgaggc
      421 cgccgtcatc gaactgctcg tcaaagtgct gccagacctc gccggcaaaa tcgctgaacc
      481 gctcgccaaa accgagaaga tagtcatcat caacagcggc gccggcccgg gtggcggcgc
      541 aagcaaactc accggcgaca tcgcccagat actcgcgcaa ctcccgcccg tgctcgaaag
      601 cctgaccggc gtgaagcttg aaaagctgat cgaacaggtg cccgcgctga ggaacgcgac
      661 gggcaaatcc gaccacaaac cgtcctgacc ccgcctccgc catgcgcggc cccgtctgaa
      721 ccggtcatca ccgcctttgt cgtcctgctg ctgatcccgt gggcggcggt gatcggcctc
      781 gcgctgttcg ccttatggct ttggatgctc gttcagagct gccacgaatc cgggcatgga
      841 gcaaggcggg aaaatcgcct gggtgctcat ccttgttttc gtcccgttca tcggtcctgt
      901 tgtgtgtttc ctcatcggcc gccccaaggc ttggcggccg cgaccgacat gaacaccgga
      961 cacattctgt tgccggcctt cgcgccgctg ttcctcggcg cggcaccggg gcatgcgtgg
     1021 caaaaaatcc gcctgcggag acggagacgg cggacgcggc ggcggttggg gtggcgcggg
     1081 cgttgactct tggggggagg aaacgtgacg caaccgtccg ggtctgtcga gcttgcgcgc
     1141 ggctcgacga gcgccgctca tccccttatc ctcgccgcca tgcatccgct gttcaccggc
     1201 ctcctcgggc tggcggtctt tctcgcgctg gcttgggcgc tgtcgcttga ccggaaacgc
     1261 ttcccctggc gcacggtggc gtgcgggctg gcgctgcaat tcaccttcgg cttcctcatc
     1321 ctcaagaccg ggccgggccg gacggtcttc gctttcttca acgacgccgt caccaccttc
     1381 atcggattcg cggacagggg cacggcgatg gtgtttggac cgctcgcgtc ggcgcccgct
     1441 ctcgagcagt cgttcggcgc gggcaacggg ttcatcttcg ccgtcgtggt tctgggcacc
     1501 atcatcctgg tgtccgccgt gtcctcgttt ctctaccact acggcatcct gcaactggtg
     1561 gtgcgcgggg cggcgtgggt gatgcggcgg gtgatgcgga ccagcggcag cgaaagcctg
     1621 agcgccgccg cgaacatctt catgggccag accgaggcgc cgctcgtcat caagccgtat
     1681 ctgccgcgca tgacgcggag cgaattgctg gcgatgatga ccggcggcat ggccaccatc
     1741 gcgggcggcg tgctggccgt gtatgcgagg ctcggcgtca ccgccggcga cctgctgacc
     1801 gcctcggtca tgaacgcccc cgccggcctg cttatcgcca aaatcctcct gcccgagacc
     1861 gagcgcagcg aaaccgcggg cgccgcgaag gcggacgtgc cgcgcaccac agtcaacggc
     1921 attgacgcgc tttgcgtcgg cgcggcggac ggcctcaagc tggcgttgaa cgtctgcgcc
     1981 atgctgatcg cgttcgtcgc ggtcgtgcat ctggcgaact ttctcctcgc cgcgccccag
     2041 caatgggcgg gcgcgaccgc gccggtgacg ctgcaaacgc tcctgggctg gatcaacacg
     2101 ccctttgcgt ggctgatggg cgtgcccgcg cgggacagcg cgctcgtcgg ccaggtgctg
     2161 ggcgagcgca tcgtgttgaa cgagttcgtg ggctacctga gcctcacgag cgaggcggtg
     2221 cgtccgcgca tcgaggaacg cagtttccgg atcgccgtct atgccatttg cggtttcgcc
     2281 aacttcgcca gcgtggccat ccagattggc ggtatcagcg cgctggtgcc cgagcgccgc
     2341 gccgatctcg ccagcctcgg gctgcgcgcc atgctcggcg gcctgctggc gtgttatctc
     2401 accgccacgc tcgcggggat gctcctgtga acccgccgga acgg
//
LOCUS       DATIKR010000454         1669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_163948, whole genome shotgun sequence.
ACCESSION   DATIKR010000454 DATIKR010000000
VERSION     DATIKR010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163948"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1669)
                     /gene="ftsH"
                     /locus_tag="VLL76_07100"
     CDS             complement(<1..>1669)
                     /gene="ftsH"
                     /locus_tag="VLL76_07100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HSV29307.1"
                     /translation="APNRSSYSAIRALVADGQVAELTFYAAGSGLAKGKDGTLHTALL
                     PPLVAAELAREAAAKGTGVIFSTDKAFGESDGLTTETVLAIGGNILIFGALGFAVWFF
                     VIRGGVAGSGNKARLAGASESKVRFADVAGCDNEKLELMEVVEFLKEPRRFTKLGAQV
                     PTGVLLSGPPGTGKTMMARAVAGEAGVPFFSISGSDFVEMFVGVGAGRVRKMFATAKK
                     KAPCILFIDEIDAVGRQRSGANARAAHEEREQTLNQLLVEMDGFKPNSGVVVIAATNR
                     PDILDEALLRPGRFSRQIVLQAPDVAGRDKILSVHAAKVAMDDSVELHVVARGTPGFS
                     GAQLAHLVNEAAIVAARSGRDTVTMADFDIAKDRILLGTERQMLMNEDDRRLTAYHEA
                     GHAVVAMHMPASDPIHKATIVPRGQALGMVVRIPEKDSPALRRSKLKADLAVAMGGRA
                     AEELIFGADEISTGASGDIQMATRIARKMVTEWGMSERIGMVAFAGMAGDPYTSDGVR
                     SDDTSREIDAEIRALVAEARMKALAVLKSHPWQLEAVAQALLERESLT"
BASE COUNT          244 a          571 c          586 g          268 t
ORIGIN      
        1 ggtcaggctt tcgcgctcca gcaaagcctg ggcgacggcc tccaactgcc aggggtgcga
       61 cttcagcacc gccagggcct tcatgcgggc ctcggccacc agggcgcgga tctcggcgtc
      121 gatctcgcgg ctggtgtcgt ccgagcgcac gccgtcggag gtgtaggggt cacccgccat
      181 gccggcgaag gcgaccatgc cgatccgctc gctcatgccc cattcggtga ccatcttgcg
      241 ggcgatgcgg gtcgccatct ggatgtcgcc cgaggcgccg gtcgaaattt cgtcggcgcc
      301 gaagatcaat tcctcggcgg cgcgcccgcc catggccaca gccaggtcgg ccttgagctt
      361 cgagcggcgc agcgcggggc tgtccttctc cgggatgcgc accaccatgc ccagggcctg
      421 gccgcgtggc acgatggtgg ccttgtggat ggggtcgctg gccggcatgt gcatggcgac
      481 gacggcgtgg ccggcctcgt gataggcggt caggcggcgg tcgtcctcgt tcatcagcat
      541 ctgtcgctcg gtgcccagca ggatgcggtc cttggcgatg tcgaaatcgg ccatggtgac
      601 ggtgtcgcgg cccgagcggg ctgcgacgat ggcggcctcg ttgaccagat gggccaattg
      661 ggcgcccgag aagccggggg tgccgcgcgc caccacatgc aattcgacgc tgtcgtccat
      721 ggcgaccttg gcggcatgca ccgacaagat cttgtcgcgg ccggccacgt cgggggcctg
      781 cagcacgatc tggcgcgaga agcggccggg ccgcagcagc gcctcgtcca ggatatcggg
      841 gcggttggtg gcggcgatca ccaccacgcc ggaattgggc ttgaagccgt ccatctcgac
      901 cagcaactgg ttcagcgtct gctcgcgttc ctcgtgggcg gcccgcgcgt ttgcgcccga
      961 gcgctggcgg ccgacggcgt cgatctcgtc gatgaacagg atgcacggcg ccttcttctt
     1021 ggcggtggcg aacatcttgc gcacccggcc ggcgccgacg ccgacgaaca tctcgacgaa
     1081 gtccgagcca gagatcgaga agaacggcac cccggcctcg ccggcgacgg cgcgggccat
     1141 catggtcttg ccggtgccgg gcgggccgga cagcagcacg ccggtgggca cctgggcgcc
     1201 cagcttggtg aagcggcgcg gctccttcag gaactcgacc acttccatca attcaagctt
     1261 ctcgttgtcg cagccggcga cgtcggcgaa ccgcaccttg ctttccgagg cgccggccag
     1321 cctggccttg ttgccgctgc cggcgacgcc gcccctgatc acgaagaacc acaccgcgaa
     1381 gcccagcgcg ccgaagatca ggatgttgcc gccgatggca agcacggtct cggtcgtcag
     1441 gccatccgat tcaccgaagg ccttgtcggt cgagaagatg acaccggtgc ccttggcggc
     1501 ggcctcgcgc gccagttcgg cggcgaccag cggcggcagc agtgcggtgt gcagcgtgcc
     1561 gtccttgccc ttggcgaggc ccgaccccgc cgcatagaag gtcaattcgg ccacctggcc
     1621 gtcggccacc agcgcgcgga tggcggaata gctcgaccgg ttcggcgcc
//
LOCUS       DATIKR010000455         4240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_43604, whole genome shotgun sequence.
ACCESSION   DATIKR010000455 DATIKR010000000
VERSION     DATIKR010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4240
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43604"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VLL76_07105"
     CDS             complement(<1..573)
                     /locus_tag="VLL76_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29308.1"
                     /translation="MRVLVVEDDRMMAQVIETMLKAEGMVVDTTALGEDGLEIGKLYD
                     YDIILLDLMLPDMDGYEVLKRLRASRIETPVLILSGLSEPDKKIKGLGSGADDYLTKP
                     FDRGELVARIQAIVRRSKGHAQSIIRTGKLSVNLDTRTVEVAGEPLHLTAKEYGILEL
                     LSLRKGQTLTKEQFLNHLYGGIDEPELKIID"
     gene            738..2090
                     /gene="fliI"
                     /locus_tag="VLL76_07110"
     CDS             738..2090
                     /gene="fliI"
                     /locus_tag="VLL76_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HSV29309.1"
                     /translation="MKFLAKNLINDIERITGIQVYGRVAGVQGMLVEAGGVQRQLSVG
                     DRCTVVARDGRGVPCEVVGFRQGRALLMPFVAIDGVGLGCRTEVQDAEPVVYPDQGWL
                     GRVINAFAQPVDGLGALPTGEAAYPIRNRPPPAHSRTRVAGKVDLGVRAVNSFLTMCR
                     GQRMGVFAGSGVGKSSILSMMARNTSCDVSVIGLIGERGREAREFIEDDLGEEGMKRS
                     VIVVSTSDESPLMRRQAAYLTLSVAEFFRDQGLDVLCMMDSVTRFAMAQREISLSAGE
                     PPASKGYTPTVFAELPRLLERAGPGTGKGSITGIFTVLVDGDDHNEPIADAVRGILDG
                     HIVLDRAIADRGRYPAVNILRSVSRTMPACNNEQENAIVSRARRLLATYEDMAELIRL
                     GAYRRGTDPAVDEAMHYYPMLEAFLTQRKTEANSLQECYAQLAEILQMPFDGDGMGRR
                     "
     gene            2094..2531
                     /locus_tag="VLL76_07115"
     CDS             2094..2531
                     /locus_tag="VLL76_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29310.1"
                     /translation="MAGAKSKGLKTLIRLSRFNVDEKRRMLVELQNREDQILEDIRQH
                     DIRLKEEQRLAAEDAIGIGFAYGSYHKQWMAQREQNQIALMAVRHMIEQARDELAEAY
                     RQLKTYEITQKERERKEREEADRKEQAFLDELGQQMHQRKGAD"
     gene            2715..>4240
                     /locus_tag="VLL76_07120"
     CDS             2715..>4240
                     /locus_tag="VLL76_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV29311.1"
                     /translation="MTTHAGRGRVLAVLGPTNTGKTHFAIERMLGHASGMIGFPLRLL
                     ARENYDRIVRIKGAASVALITGEEKIIPKQPRYFVCTTESMPLDRRVAFLAVDEIQLC
                     ADPDRGHVFTDRLLHARGSEETVFLGAETIKPLLRRLVPGVEFATRPRLSQLTYAGAR
                     KLARLPPRTAVVAFSAAEVYAMAEFVRRQRGGAAVVLGALSPRTRNAQVELYQAGEVD
                     YIVATDAIGMGLNMDVDHVSFAQLRKFDGRVPRELEPAEIAQIAGRAGRHMNDGTFGT
                     TADVGGISDEVVEAVENHHFAPLKALSWRNSDLRFATVSALIGSLDRPPPGPGLIRAR
                     EADDQIALATLAHDPEILKLANHPERVRLLWDVCQIPDFRKVMAEAHTRLLSQVFRHL
                     TGPGRRLPTDWLAGHVERLDRTDGDLDTIIGRIANIRTWTYVSHRADWVVDPAHWQGL
                     TRAIEDKLSDALHERLTQRFIDRRTAVLVRRMRDDGELLSAVARSGDVLVEGHYVGRL
                     A"
BASE COUNT          699 a         1464 c         1395 g          682 t
ORIGIN      
        1 gtcgatgatc ttcaactcgg gctcgtcgat accgccgtac agatgattga ggaattgctc
       61 cttggtcagg gtctggccct tgcgcaggct cagcaattcc aggatcccgt attccttggc
      121 ggtcaggtgc agcggctcgc cggcgacctc gaccgtgcgg gtgtccaggt tcaccgacag
      181 cttgccggtg cggatgatgg attgcgcatg gcccttggac cggcgcacga tggcctggat
      241 gcgggcgaca agttcgccgc ggtcgaacgg cttggtcaga tagtcgtcgg cgcccgagcc
      301 caggcccttg atcttcttgt ccggttcgct gaggccggac aggatgagga ccggggtctc
      361 gatccgcgac gcccgcaggc gcttgagcac ctcgtagccg tccatgtcgg gaagcatcag
      421 gtcgagcagg atgatgtcgt aatcgtacaa cttgccgatt tccaggccat cctcgcccaa
      481 cgccgtcgtg tcgacgacca ttccttcggc cttgagcatc gtttcgatga cctgggccat
      541 catccggtcg tcttcgacaa caagcacgcg catgtggggt accccggttt gccgtgtatt
      601 gagattgggt taaccataag ggggtatttt ggcgacttca aggcgcccgg caacctaagc
      661 ccctcacgat aaagggctaa tcctaatcca aaggtgattt ccggtcaccc ggatggtgca
      721 gaaatggagc gtaacggttg aagttcctgg ccaagaacct gatcaacgac atcgagcgca
      781 tcaccgggat ccaggtttac ggccgggtcg cgggcgtcca gggcatgctg gtcgaggccg
      841 gcggcgtcca gcgccagttg tcggtgggcg accgctgcac cgtcgtcgcc cgcgacgggc
      901 gcggcgtccc gtgcgaggtg gtggggttcc gccagggccg ggcgctgctg atgccgttcg
      961 tcgccatcga cggcgtgggc ttaggctgcc gcaccgaggt gcaggatgcc gagccggtgg
     1021 tctatcccga ccagggctgg ctgggccggg tgatcaacgc gttcgcccag ccggtggacg
     1081 gcctgggcgc gctgcccacc ggcgaggccg cctatcccat ccgcaaccgc ccgccgccgg
     1141 cccattcgcg cacccgcgtg gccggcaagg tcgatctggg cgtgcgggcg gtcaattcct
     1201 tcctcaccat gtgccggggc cagcgcatgg gcgtgttcgc cggctcgggc gtcggcaaat
     1261 cgtcgatcct gtcgatgatg gcgcgcaaca cctcgtgcga cgtctcggtg atcggcctga
     1321 tcggcgagcg tggccgcgag gcccgcgagt tcatcgagga cgatctcggc gaagagggca
     1381 tgaaacggtc ggtgatcgtc gtctcgacct cggacgaaag cccgctgatg cgccgccagg
     1441 ccgcctacct gaccctgtcg gtggcggaat tcttccgcga ccagggcctg gacgtgctgt
     1501 gcatgatgga ttcggtgacc cgtttcgcca tggcccagcg cgagatcagc ctgtcggcgg
     1561 gcgagccgcc ggcgtccaag ggctataccc ccaccgtgtt cgccgaattg ccgcgcctgt
     1621 tggagcgcgc cggccccggc accggcaagg ggtccatcac cggcatcttc accgtgctgg
     1681 tggacggcga cgaccacaac gaacccatcg ccgacgccgt gcgcggcatc ctcgacggcc
     1741 acatcgtgct ggaccgcgcc atcgccgacc gtggccgcta tcccgccgtc aacatcctgc
     1801 gcagcgtgtc gcgcaccatg ccggcctgca acaacgagca ggagaacgcc atcgtcagcc
     1861 gcgcgcgccg cctgctggcg acctacgagg acatggcgga gctgatccgc ctgggcgcct
     1921 atcgccgcgg caccgacccg gcggtggacg aggcgatgca ttactacccc atgctggaag
     1981 ccttcctgac ccagcgcaag accgaggcca attccttgca ggaatgctat gcccaattgg
     2041 ccgagattct gcagatgccg ttcgacggcg atggcatggg aaggcgctag gccgtggcgg
     2101 gggccaagtc caagggcctg aagacactga tccggctgtc gcgcttcaac gtggacgaga
     2161 agcgccgcat gctggtcgag ctgcagaatc gcgaggacca gatcctcgag gacatccgcc
     2221 agcacgacat ccgcctcaag gaggaacagc gcctggcggc cgaggatgcc atcggaatcg
     2281 gcttcgccta tggcagctac cacaagcaat ggatggccca gcgcgagcag aaccagatcg
     2341 cgctgatggc ggtgcgccac atgatcgagc aggcccgcga cgaactggcc gaggcctatc
     2401 gccagctcaa gacctacgag atcacccaaa aagaacgcga gcgcaaggag cgcgaggaag
     2461 ccgaccgcaa ggaacaggca ttcctcgacg aactgggcca gcagatgcac cagcgcaagg
     2521 gcgccgactg agcctttcag agaatttgtc atcccggcca agcgcagcgc gagccgggat
     2581 ccatggtgcc gcctgacgga tggatcccgg gtcgagcccg ggatgacgat ccaatcgtcg
     2641 ttccgtggtg accccacacc ggccgagaac tcgcccttgc attccccgtc cgttgccccg
     2701 actctcatgg ggtgatgacg acgcatgccg ggcgtgggcg ggtcctggcc gtcctcggtc
     2761 ccaccaatac cgggaaaacc catttcgcca tcgagcgcat gctcggtcac gcctcgggca
     2821 tgatcggctt tccgctgcgc ctgctggcgc gcgagaatta cgaccgcatc gtccgcatca
     2881 agggcgcggc ctcggtggcg ctgatcaccg gcgaagagaa gatcatcccc aagcagccgc
     2941 gctatttcgt ctgcacgacc gaatccatgc cgctggaccg ccgcgtcgcc ttcctggcgg
     3001 tggacgagat ccaattgtgc gccgaccccg atcgcggcca cgtcttcacc gaccgcctgc
     3061 tgcacgcgcg cgggtccgag gaaaccgtgt tcctgggcgc cgagaccatc aagccgctgc
     3121 tgcgcaggct ggtgccgggc gtcgagttcg ccacccggcc ccgcctgtcc cagctcacct
     3181 atgccggcgc gcgcaagctg gcccggctgc cgccacgcac cgccgtggtg gcgttctcgg
     3241 ccgccgaggt ctatgccatg gccgaattcg tgcggcggca acggggcggc gcggccgtgg
     3301 tgctgggggc gctgtcgccc cgcacccgca acgcccaggt cgagttgtac caggccggtg
     3361 aggtcgacta catcgttgcc accgacgcca tcggcatggg cctcaacatg gacgtcgacc
     3421 acgtctcgtt cgcccagttg cgcaagttcg acggccgcgt cccgcgcgag ctggaaccgg
     3481 ccgagatcgc gcagatcgcc gggcgcgccg gccgccacat gaacgacggc accttcggca
     3541 ccaccgccga cgtgggcggc atctccgacg aagttgtcga ggcggtcgag aaccaccatt
     3601 tcgcgccgct gaaggcgctg tcgtggcgca attccgacct gcgcttcgcc accgtgtcgg
     3661 cgctgatcgg ctcgctcgac cggccgccgc ccggccccgg cctgatccgc gcccgcgagg
     3721 ccgacgacca gatcgccctg gccaccctgg cccacgaccc cgagatcctc aagctggcca
     3781 accaccccga gcgggtgcgg ctgttgtggg acgtctgcca gatccccgac ttccgcaagg
     3841 tcatggccga ggcccacacc cgcctgctga gccaggtgtt ccgccacctc accggcccgg
     3901 ggcggcggct gcccaccgac tggctggccg gccacgtcga gcggctggac cgcaccgacg
     3961 gcgacctcga caccatcatc ggccgcatcg ccaacatccg cacctggacc tatgtgtcgc
     4021 accgcgccga ttgggtggtc gatccggcgc actggcaggg cctgacccgc gccatcgagg
     4081 acaagctgtc cgacgccctg cacgagcgcc tgacccagcg tttcatcgac cgccgcacgg
     4141 cggtgctggt gcgccgcatg cgcgacgacg gcgagttgct gagcgcggtg gcgcgctcgg
     4201 gcgacgtgct ggtcgagggc cattacgtcg gccgcctggc
//
LOCUS       DATIKR010000456         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_54927, whole genome shotgun sequence.
ACCESSION   DATIKR010000456 DATIKR010000000
VERSION     DATIKR010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54927"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..928)
                     /locus_tag="VLL76_07125"
     CDS             complement(20..928)
                     /locus_tag="VLL76_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV29312.1"
                     /translation="MTIYLPIAELSVSVLGLLALGGGVGLLSGLFGIGGGFLLTPLLM
                     FMGVPPAVAVATGANQVIGASVSGLVAHWRRRNVDIRMGVVLMIGGFAGSTLGVALFA
                     FLDRAGLIDTAVALAYVVFLGVVGILMGAESLVTLRRTRNEAVQPRKRHRHPFPGLPF
                     KMRFPRSGLYVSVLVPLGVGAFGGTLSAIMGVGGGFVMVPLMIYVIEMPTTVVIGTSL
                     FQIIFVTANVTLLHATTTHSVDAVLMLTLLIGGVVGAQWGARFGARLRGEQLRLLLAL
                     LVVLVALRLAAGLVLTPDDVFRLETR"
     gene            1057..1359
                     /locus_tag="VLL76_07130"
     CDS             1057..1359
                     /locus_tag="VLL76_07130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29313.1"
                     /translation="MTMWAPLMALAPPVLWFGYFLAVYGVNALACAMGWPAAPAIAAE
                     TLLTVAALLAVGMPVWKLVRSQAPDFWRYVGMGLGGLSLLATVWVGLTVWMVPACG"
     gene            1350..>1582
                     /locus_tag="VLL76_07135"
     CDS             1350..>1582
                     /locus_tag="VLL76_07135"
                     /inference="COORDINATES: protein motif:HMM:NF019401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1622 domain-containing protein"
                     /protein_id="HSV29314.1"
                     /translation="MRMIEDAIRVTTLAVETAGIAVIVMGSAMAAIAFMVRWRSGEFE
                     PAYVAFRADLGRAILLGLELLVGADIINTVTLDA"
BASE COUNT          256 a          538 c          565 g          223 t
ORIGIN      
        1 gccggcgccg tccgccacct taccgcgtct ccagccggaa cacgtcgtcg ggcgtcagca
       61 ccaggccggc ggccaggcgt agggcgacca ggaccaccag cagcgccagc agcaggcgca
      121 attgctcgcc gcgcaggcgg gcgccgaagc gggcgcccca ttgggcgccg accacgccgc
      181 cgatcagcag cgtcagcatc agcaccgcgt cgacgctgtg ggtggtggtg gcgtgcagca
      241 gggtgacgtt ggcggtcacg aagatgatct ggaacagcga ggtgccgatg accaccgtgg
      301 tgggcatctc gatcacatag atcatcagcg gcaccatcac gaagccgccg cccacgccca
      361 tgatggccga cagcgtgccg ccgaaggcgc cgacacccag cggcaccagc acgctgacat
      421 acagccccga gcgggggaac cgcatcttga acggcaggcc ggggaagggg tggcggtgac
      481 gcttgcgcgg ctgcaccgcc tcgttgcggg tgcgccgtag cgtgaccagg ctttccgccc
      541 ccatcaggat gccgaccacg ccgaggaaca ccacataggc cagcgcgacg gcggtgtcga
      601 tcagcccggc gcggtcgagg aaggcgaaca gggcgacgcc cagggtggac ccggcgaagc
      661 cgccgatcat cagcaccacg cccatgcgga tgtcgacgtt gcggcgccgc caatgggcca
      721 ccagtcccga caccgaggcg ccgatcacct ggttggcgcc ggtcgccacc gccaccgccg
      781 gcggcacccc catgaacatc agcagggggg tcagcaggaa gccgccgccg atgccgaaca
      841 gccccgacag cagcccaacg ccgcccccaa gggccaacag gcccagcacg ctgaccgaca
      901 attccgcgat cggcagatag atggtcatgc cgaactaggt ggagcctgtt cctccgggcg
      961 tgaacggcgc atgggtggca ctccttcccg gccaattggt tcacgcgtca gggtgcgtca
     1021 ccatctgttg acgggacacg gcagagggca gggcggatga cgatgtgggc tccgttgatg
     1081 gcgctggcgc cgccggttct gtggttcggc tatttcctgg cggtctatgg ggtcaacgcg
     1141 ctggcctgcg ccatgggctg gccggcggct cccgccatcg ccgccgagac cctgctgacc
     1201 gtcgccgccc tgctggccgt gggcatgccg gtgtggaagc tggtgcggtc ccaggcgccc
     1261 gatttctggc gctatgtcgg catggggctg ggcgggctgt cgctgctggc gacggtgtgg
     1321 gtggggttga cggtgtggat ggtgccggca tgcggatgat cgaggacgcc atccgcgtca
     1381 ccaccctggc ggtcgaaacg gccggcatcg ccgtgatcgt gatgggatcg gcgatggcgg
     1441 caatcgcctt catggtgcgg tggcggagcg gggagttcga gcccgcctac gtcgccttcc
     1501 gcgccgatct cggccgcgcc atcctgctgg gcctggaact gctggtcggg gccgacatca
     1561 tcaacaccgt gaccctggac gc
//
LOCUS       DATIKR010000457         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_6831, whole genome shotgun sequence.
ACCESSION   DATIKR010000457 DATIKR010000000
VERSION     DATIKR010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6831"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VLL76_07140"
     CDS             <1..418
                     /locus_tag="VLL76_07140"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017907643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HSV29315.1"
                     /translation="AGLSWEIVLKKRAALVRAFEGFEPATVAAYGDDQVARLLSDASI
                     IRNRRKIAACIENARRLVALSARHGSFAAWIHAHHPLSKDEWVKLFKQTFVFMGGEVV
                     NEFLMSIGYLPGAHREDCPAFARITPHRPAWMDVKG"
     gene            725..1585
                     /locus_tag="VLL76_07145"
     CDS             725..1585
                     /locus_tag="VLL76_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29316.1"
                     /translation="MFRAVLALAALALPAVAAAEEVTVSITAKDCARLLRHQPAADVA
                     YQPGVGVKGRKVAPADLPGSGNTISVLPEVFEIPITISPVGWVERNAANKKKATAETG
                     LSDTYQGKVAAERQLTTLGTEKTTLDTKAATLATEKATLDAAKATADADLAALQAQVD
                     AGTRSYADVSYVRARRDAGTAATKVDAKQAEIDSNAAALTANATAQATQQAIIDAAAG
                     KTAGYTADKAAAEATLSGQSARGLDQSTMKIGTFKYDTLRGTFTFNDQPIGSAEEQAM
                     AEACAKRGVK"
     gene            1646..>2333
                     /locus_tag="VLL76_07150"
     CDS             1646..>2333
                     /locus_tag="VLL76_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV29317.1"
                     /translation="MVFDAFERMVAFRYLRARRKEGFISVIAGFSLLGIGLGVATLIV
                     VMAVMNGFRQELLSRILGINGHMGVYGAGAALVEFDPLAGQIRDLPGVVRAIPTVEGQ
                     VMATSASGASGAIVRGVRPDDLLGREIMRKNLVGRPQEFGTAEDTVLIGYRLAEKLGV
                     VVGDTVTLISPKGNATAFGTVPRMKGYTVAGTFNVGMFEYDSGFIFMPLEAAQTYFRL
                     PNAVTQIEVFL"
BASE COUNT          390 a          810 c          746 g          387 t
ORIGIN      
        1 ggccggcctg tcgtgggaaa tcgtcctgaa gaagcgggcc gccctggtgc gcgccttcga
       61 gggcttcgaa ccggccaccg tcgccgccta tggcgacgac caggtcgccc ggctgctgtc
      121 ggatgcctcg atcatccgca accggcgcaa gatcgccgcc tgtatcgaaa acgcccgccg
      181 gctggtggcg ctgtcggccc ggcacggctc gttcgcggca tggatccacg cccaccatcc
      241 gctgtccaag gacgaatggg tcaagctgtt caagcagacc ttcgtcttca tgggcggcga
      301 ggtggtcaac gaattcctga tgagcatcgg ctatctgccc ggcgcccacc gcgaggactg
      361 cccggccttc gcgcgcatca cgccacaccg cccggcctgg atggatgtga agggttgaag
      421 cggtcgccca aaacgcaaaa acggcaaagt cgctagccga ccttgccgtt ccctgcgtct
      481 ccgcgccttg ccgtcccgtg ggacagctgg cgtcctcctc cctaaacctg agccgcataa
      541 ggggtgccct ttgggtcgtt ccccttgagc ctatcggctg ttggagtgaa ctctacgcaa
      601 tttcctgagg cacgtcacca tctttttttc cggaaatttc gtgaatccgc attttttcgg
      661 tttgccttga acccggcccg ccgttgcggc aggctttttc cgtgacaacc cgcgggtgca
      721 gaccatgttt cgtgccgtcc ttgcccttgc cgcgctcgcc ctgcccgccg tcgcggccgc
      781 cgaagaggtg acggtttcga tcaccgccaa ggattgcgcc cgcctgctgc gccatcaacc
      841 ggcggccgac gtcgcctacc agcccggcgt gggcgtgaag gggcgcaagg tggcgccggc
      901 cgacctgccc ggcagcggca acaccatttc cgtgctgccc gaggtgttcg aaatccccat
      961 caccatttcc ccggtgggct gggtcgagcg caacgccgcc aacaaaaaga aggcgacggc
     1021 cgagacgggc ctttcggaca cctaccaggg caaggtcgcg gcggagcgcc aattgaccac
     1081 cctgggcacc gaaaagacga ccttggatac caaggcggcg accctggcca ccgagaaggc
     1141 gacgctcgat gccgccaagg ccactgccga cgccgacctc gcggcgcttc aggcccaggt
     1201 tgacgcgggc acccgctcct atgccgacgt ctcgtatgtg agggcgcggc gggacgcggg
     1261 cacggcggcg accaaggtgg acgccaagca ggccgagatc gattccaacg ccgccgcgtt
     1321 gaccgccaac gccacggccc aggcgacgca gcaggcgatc atcgacgcgg ccgccggcaa
     1381 gaccgccgga tacaccgccg acaaggccgc cgccgaggcg accctgtcgg ggcagtcggc
     1441 acgcggcctc gaccaaagca ccatgaagat cggcaccttc aaatacgaca ccttgcgcgg
     1501 caccttcacc ttcaacgacc agcccatcgg ttcggccgag gagcaggcca tggcggaagc
     1561 gtgcgccaag cgcggggtga agtgattgtc ttcgcgcgcc gctttgccta aagtcgcccg
     1621 catcctttaa ccgcatggac ggatcatggt cttcgacgcc ttcgagagga tggtggcgtt
     1681 ccgctatttg cgggcacggc gcaaggaagg gttcatctcg gtcatcgccg gcttttcgct
     1741 gctgggcatc ggcctgggcg tcgccacgct gatcgtggtg atggcggtga tgaacggctt
     1801 ccgccaggaa ttgctgtcgc gcatcctcgg catcaacggc cacatgggcg tctatggcgc
     1861 cggcgcggcg ctggtcgaat tcgacccgct ggccggccag atccgcgacc tgccgggcgt
     1921 ggtgcgcgcc atccccaccg tcgaggggca ggtcatggcg acctcagcgt cgggcgcctc
     1981 gggcgccatc gtgcgcggcg tgcggcccga cgacctgctg ggacgcgaga tcatgcgcaa
     2041 gaacctggtg ggccgtccgc aggaattcgg caccgccgag gacaccgtgc tgatcggcta
     2101 ccgcctggcc gagaagctgg gcgtggtggt gggcgacacc gtcaccctga tctcgcccaa
     2161 gggcaacgcc accgccttcg gcaccgtgcc gcgcatgaag ggctacaccg tcgccggcac
     2221 cttcaacgtc ggcatgttcg aatacgacag cggcttcatc ttcatgccgc tggaggccgc
     2281 gcagacctat ttccgcctgc ccaacgccgt cacccagatc gaggtgttcc tgg
//
LOCUS       DATIKR010000458         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_187940, whole genome shotgun sequence.
ACCESSION   DATIKR010000458 DATIKR010000000
VERSION     DATIKR010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187940"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..964)
                     /locus_tag="VLL76_07155"
     CDS             complement(<1..964)
                     /locus_tag="VLL76_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHIPEP family type III secretion protein"
                     /protein_id="HSV29318.1"
                     /translation="MAEGQAQAAATEARHAFGRFTTAMRRGDVVLAIGVMAILLVLIL
                     PMPPWLLDVGLALSITFAVLVLMVSIFIEKPLQFSSFPTVILLATLIRLALNLASTRL
                     ILAHGHEGVEGAGNVIAAFAGFIMGGNFVIGIIVFAILIIVNFMVITKGSTRIAEVAA
                     RFTLDGLPGKQMAIDADLSSGLIDEDTAKRRRLELELESKFFGAMDGASKFVRGDAVA
                     GLLITAINVIGGMIIGMVQKDLTFMQAADYYTQLTVGDGLVSQVPALLVSVAAGILVT
                     KAGVEDSVDKALYTQLAGYPRAVGTAGGLVALMALVPSMPFLPFA"
     gene            complement(989..>1828)
                     /locus_tag="VLL76_07160"
     CDS             complement(989..>1828)
                     /locus_tag="VLL76_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSV29319.1"
                     /translation="PENLLESELFGHEKGAFTGAVARRIGKFEEANGGTLLLDEISEM
                     DVRLQAKLLRAIQEKEIDRVGGSQPVKIDVRIVATSNRNLEDYVRQGGFREDLYYRLN
                     VVNVALPALRERPLDIAVLADHFVKKYSESNGLPSRPLSAEARQMLVRHHWRGNVREL
                     ENTMHRAVLLASGNDIGADAIILSGGQVGGPQNPVVAQAASAAASVISGNAKTGLVGK
                     TVAEVERDLIIDTLEHCLGNRTHAANILGISIRTLRNKLKQYSEEGMSVPPPQGGEDR
                     APL"
BASE COUNT          302 a          595 c          622 g          309 t
ORIGIN      
        1 gggcgaaagg caggaacggc atcgacggca ccagcgccat cagcgccacc aggccgccgg
       61 cggtgccgac cgcgcgggga taaccggcca actgggtgta cagcgccttg tcgacgctgt
      121 cctcgacgcc cgccttggtg accaggatac cggcggccac cgacaccaac agcgccggca
      181 cctggctgac caggccgtcg cccaccgtca actgggtgta gtaatcggcc gcctgcatga
      241 aggtcaggtc cttttggacc atgccgatga tcatgccgcc gatgacgttg atggcggtga
      301 tcagcaggcc ggcgacggcg tcgccgcgca cgaatttcga ggcaccgtcc atggcgccga
      361 agaacttgct ttccagctcg agttccaggc ggcggcgctt ggcggtgtct tcgtcgatca
      421 ggcccgacga caggtcggcg tcgatggcca tctgctttcc gggcaggcca tccagagtga
      481 agcgggcggc cacttcggcg atacgggtcg agcccttggt gatcaccatg aagttcacga
      541 tgatcaggat cgcgaacacg atgatgccga tgacgaaatt gccgcccatg atgaagccgg
      601 caaaggcggc gatgacgttg ccggcgcctt cgacgccttc gtggccgtgg gccaggatca
      661 ggcgggtcga ggccaggttg agggccagcc ggatcagggt ggcgagcagg atgacggtgg
      721 ggaacgagct gaattgcagc ggcttctcga tgaagatcga gaccatcagc accagcaccg
      781 cgaaggtgat cgacagcgcc agcccgacgt ccagcagcca cggcggcatg ggcaggatga
      841 gcaccagcag gatcgccatg acgccgatcg ccagcaccac gtcgccacgg cgcatggccg
      901 tggtgaagcg gccgaacgcg tgacgcgcct ccgttgctgc tgcctgtgcc tggccttccg
      961 ccatgatccg gtcctgctcc cctggccctt acagcggcgc gcggtcttcg ccgccctggg
     1021 gcggcggcac cgacatgcct tcctcggaat attgcttgag cttgttcctc agcgtccgga
     1081 tcgagatgcc caggatgttg gccgcgtggg tgcggttgcc caggcaatgt tccagggtgt
     1141 cgatgatcag gtcgcgctcg acctcggcca cggtcttgcc gaccaggcca gtcttggcgt
     1201 tgcccgagat gaccgaagcc gccgccgagg cggcctgggc caccaccggg ttctgcggcc
     1261 cgccgacctg gccgcccgac aggatgatgg cgtcggcgcc gatgtcgttg cccgaggcca
     1321 gcagcacggc gcggtgcatg gtgttctcaa gctcgcgcac gttgccgcgc caatggtggc
     1381 gcaccagcat ctggcgggct tcggccgaca gcggccgcga cggcaggccg ttgctctcgg
     1441 aatacttctt cacgaaatgg tcagccagca cggcgatgtc gagcgggcgc tcgcgcaggg
     1501 ccggcagcgc cacgttgacc acgttgaggc ggtagtacaa atcctcgcgg aagccgccct
     1561 ggcggacgta atcctcgagg ttgcggttcg aggtggcgac gatgcgcacg tcgatcttga
     1621 ccggctggct gccgccgacc cggtcgattt ccttttcctg gatggcgcgc agcagcttgg
     1681 cctgcaggcg gacgtccatt tccgagattt cgtccagcag cagggtgccg ccgttggctt
     1741 cctcgaactt gccgatgcgc cgcgccacgg cgccggtaaa ggcgcccttt tcatggccga
     1801 acagctcgga ttccagcagg ttttccgg
//
LOCUS       DATIKR010000459         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_200346, whole genome shotgun sequence.
ACCESSION   DATIKR010000459 DATIKR010000000
VERSION     DATIKR010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200346"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1177
                     /locus_tag="VLL76_07165"
     CDS             <1..1177
                     /locus_tag="VLL76_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV29320.1"
                     /translation="NTFPEICGRICPQDRLCEGNCVLEQSSHGAVTIGSVEKYITEFA
                     FDQGWVKPPKPARELPYSVGIVGGGPAGLAAAEMLRKWGYQIDVYDRHDRMGGLMIYG
                     IPGFKLDKAVIERRTALYEEAGIRFHTNVEIGKTVGFDDLRAKHDAILIATGVYKARE
                     LGVPGDGLPGIHAALDYLIASNKVGMGDTVPAFADGTLNAAGKDVVVIGGGDTAMDCV
                     RTAVRQGAKTVRCLYRRDRANMPGSQREVAHAEEEGVEFVWMGAPKAIVGNGKAEAVR
                     AVRMHLGVADSSGRQTPVAIDGSDFELPADMVIAALGFDPEDVPALFGQPDLGVTRWG
                     TVKIDHRTQMTNLDGVFAAGDIVRGASLVVWAIRDGRDAAAAIDQYVKAKVATQAAE"
     gene            1311..>1611
                     /locus_tag="VLL76_07170"
     CDS             1311..>1611
                     /locus_tag="VLL76_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29321.1"
                     /translation="MSDFVAEYLANERLLNEAGIDTMPHDACGVGLVASLDGKPRRDV
                     VVAGIEALRVLFHRGAVDADGKTGDGAGIHVEIPQDFFIDHIRHTGHEPGPGKIAI"
BASE COUNT          277 a          564 c          522 g          248 t
ORIGIN      
        1 caacaccttc cccgagatct gcggccgcat ctgcccgcag gaccgcctgt gcgagggcaa
       61 ttgcgtgctg gagcaatcca gccacggcgc cgtcaccatc ggttcggtcg agaagtacat
      121 caccgaattc gccttcgacc agggctgggt caagccaccc aagccggcgc gcgagctgcc
      181 ctattccgtc ggcatcgtcg gtggcggccc ggccgggctg gcggcggccg agatgctgcg
      241 caagtggggc tatcagatcg acgtctacga ccgtcacgac cgcatgggcg gcttgatgat
      301 ctatggcatc cccggcttca agctggacaa ggcggtgatc gaacgccgca ccgcgctgta
      361 tgaagaggcc ggcatccgct tccacaccaa cgtcgagatc ggcaagaccg tcggcttcga
      421 cgatctgcgc gccaagcacg acgccatcct gatcgccact ggcgtctaca aggcgcgcga
      481 actgggcgtg cccggcgacg gcctgcccgg tattcacgcg gcgctcgact atctgatcgc
      541 ctccaacaag gtgggcatgg gcgacaccgt ccccgccttc gccgacggca cgctcaacgc
      601 cgccggcaag gacgtggtgg tcatcggcgg cggcgacacc gccatggatt gcgtccgcac
      661 cgccgtccgc cagggcgcca agacggtgcg ctgcctgtac cggcgcgacc gcgccaacat
      721 gcccggcagc cagcgcgagg tggcccatgc cgaggaggaa ggcgtcgaat tcgtgtggat
      781 gggcgccccc aaggccatcg tcggcaacgg caaggccgag gccgtgcgtg ccgtccgcat
      841 gcatctgggc gtcgccgatt cctcgggccg ccagaccccg gtggccatcg acggctccga
      901 cttcgagctg cccgccgaca tggtgatcgc ggcgctgggc ttcgaccccg aggacgtgcc
      961 cgccctgttc ggccagcccg acctgggcgt cacccgctgg ggcaccgtca agatcgacca
     1021 ccgcacccag atgaccaacc tggacggcgt gttcgccgcc ggcgacatcg tgcgcggcgc
     1081 cagcctggtg gtgtgggcca tccgcgacgg ccgcgacgcg gcggcggcga tcgaccagta
     1141 cgtcaaggcc aaggtcgcta cccaggcggc tgagtaaggt ttatcagaca cagatgaaca
     1201 cagataaaca cagatgaaaa tctgggcgcg aagcgccatc tgagttcatc tgtgttcatc
     1261 tgtgtctcct aattcttttt acgggctctg cccgtttagt ggagagcgcc atgagcgatt
     1321 tcgtcgccga gtaccttgcc aacgagcggc ttctcaacga ggccggcatc gacaccatgc
     1381 cgcatgacgc ctgcggcgtc ggcctggtcg cctcgctcga cggcaagccg cgccgcgacg
     1441 tggtggtcgc cggcatcgag gcgctgcggg tgctgttcca tcgcggcgcg gtggacgccg
     1501 acggcaagac cggcgacggc gccggcatcc atgtggaaat cccccaggac ttcttcatcg
     1561 accacatacg ccacaccggc cacgagcccg gccccggcaa gatcgccatc g
//
LOCUS       DATIKR010000460         4323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_6844, whole genome shotgun sequence.
ACCESSION   DATIKR010000460 DATIKR010000000
VERSION     DATIKR010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4323
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6844"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1525)
                     /locus_tag="VLL76_07175"
     CDS             complement(29..1525)
                     /locus_tag="VLL76_07175"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HSV29322.1"
                     /translation="MKIAFAKPQVPTEGAVAVGVMEGKKLTLAAEQLDQASGGGLVRA
                     INASKFEGKKDQTLMILAPAGLEVNRVLLVGLGKAEKLDAAAAQAVGGTAVAQLLTAG
                     DANAAIMVDVPAKAKLSPAEFAANVAFGARLRCYRFDKYLTKEKKEDKPSLKKLTVML
                     DDHSAAKSAFGPLDRIADGVFLTRDVVSEPANVIHPESLADEAKKLAEIGIDVEVLGE
                     KQMKKLGMGSLLGVGQGSDRESQLVIMRWMGAKNQEEPPVAFIGKGVTFDTGGISIKP
                     AGGMEDMKWDMAGAGAVIGTMKALAGRQARVNAVGVVGLVENMPSGNAQRPGDVVKSM
                     SGQTIEVINTDAEGRLVLADALWYAQDRFKPKFMIDLATLTGAIIISLGNEYAGLFAN
                     NDQLAERIAAAGKEVGEPVWRLPMGDSYDKQLKSDIADMKNVGGREGGSITAAQFLKR
                     FVNDVHWAHIDIAGTAWSKKDTATCPKGATAFGVRLLDRLVADHYEEK"
     gene            complement(1609..2592)
                     /locus_tag="VLL76_07180"
     CDS             complement(1609..2592)
                     /locus_tag="VLL76_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSV29323.1"
                     /translation="MPWVLKGGLSVGLISWVLSKVDLASAWAQAKAIDPWMLVAAIGL
                     MIVQIGLGAVRWGMVLRVLGAAFSWAQTVAVYYIGVFFSLVLPGAVGGDAVRMWFSRK
                     AGLPLHTAVNSVMLERAVTVYGLVLLVCVTQPILQARVPELPGGWIFQALLAIATVGI
                     LALSVMDRLPESLGHLRVVRGLAQLAADTRALFFRPFKAAATLAVAMAGHANLSMAVY
                     LLAIGLNLDIHALDCLVLVPPVILAMTLPISIAGWGVRETAMVTAFGFVGLAPEAALV
                     LSVVFGVVTMATALPGGLVFLLSGTRIPVEEMEAEVEAEEEAERETASANP"
     gene            complement(2645..3763)
                     /gene="amrS"
                     /locus_tag="VLL76_07185"
     CDS             complement(2645..3763)
                     /gene="amrS"
                     /locus_tag="VLL76_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HSV29324.1"
                     /translation="MEIEVQGSHFPARHWHRLDDGRVQCDLCPRYCKLHEGQRGLCFV
                     RACADGAMVLTTYGCSSGFCVDPIEKKPLNHFLPGTPILSFGTAGCNLTCKFCQNWDI
                     SKAREIDRLNDSADPDRIAAAAQQLGCRSVAFTYNDPVIFLEYAVDVAKACHARGLKT
                     VAVTAGYVAPEARREFFAHMDAANVDLKAFTEDFYRNLCGGHLQSVLETLVYLKEETS
                     VWFEITTLLIPGENDSDAEIDALSRWVVASLGPDVPLHFSAFHPAWKMSGLPPTASST
                     LSRARSIAKANGVRHVYTGNVHDESGGSTWCHACGARLIGRDWYELTAWHLSPDGHCP
                     DCGTAVAGIFEAKPGDWGRKRLPVRLGPSGVHPSGVSC"
     gene            3908..>4323
                     /gene="amrB"
                     /locus_tag="VLL76_07190"
     CDS             3908..>4323
                     /gene="amrB"
                     /locus_tag="VLL76_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HSV29325.1"
                     /translation="MTAIRPTAVAGQFYPAEPGQLKAQIEHFLSQAERGDGRVPKAVI
                     APHAGYVYSGPVAASAYARLLPARGRIRRVVLLGPSHRVGFRGLALGTAEQWASPLGP
                     VPIDRAALESLKGVPMVGLLDQAHAAEHSLEVHVPFL"
BASE COUNT          712 a         1492 c         1437 g          682 t
ORIGIN      
        1 ccctctcccg caagcgggcg aggggaggtt atttctcctc gtaatggtcc gccaccaggc
       61 ggtcgagcag gcggacgcca aaggccgtgg cgcccttggg gcaggtggcg gtgtccttct
      121 tcgaccacgc ggtgccggcg atgtcgatat gcgcccagtg gacgtcgttg acgaaccgct
      181 tgaggaactg ggcggcggtg atcgaaccgc cctcgcggcc accgacgttc ttcatgtcgg
      241 cgatgtccga cttcaactgc ttgtcgtagg aatcgcccat gggcaggcgc cacaccggct
      301 cgcccacctc cttgccggcg gcggcgatgc gctcggccaa ctggtcgttg ttggcgaaca
      361 ggccggcata ttcattgccc agcgaaatga tgatggcgcc ggtcagggtc gccaggtcga
      421 tcatgaactt gggcttgaag cggtcctggg cgtaccacag cgcgtcggcc agcacgaggc
      481 ggccctcggc gtcggtgttg atgacctcga tggtctggcc cgacatggac ttgaccacgt
      541 cgccggggcg ctgggcgttg cccgacggca tgttctcgac cagcccgacc acgccgacgg
      601 cgttgacgcg ggcctggcgg ccggccagcg ccttcatggt gccgatcacc gcgccggcgc
      661 cggccatgtc ccacttcatg tcctccatgc cgccggccgg cttgatggag atgccgccgg
      721 tgtcgaaggt gacgcccttg ccgatgaagg cgaccggcgg ctcttcctgg ttcttggcgc
      781 ccatccagcg catgatcacc aactggcttt cacggtccga gccctggccg acgcccagca
      841 gcgagcccat gcccagcttc ttcatctgct tttcgcccag cacctcgacg tcgatgccga
      901 tctcggccag cttcttggcc tcgtcggcca ggctttccgg atggatgacg ttggccggct
      961 cgctgaccac gtcgcgggtc aggaacacgc cgtcggcgat gcggtcgagc gggccgaagg
     1021 cggacttggc ggccgaatgg tcgtcaagca tcaccgtcag cttcttcagc gacggcttgt
     1081 cctccttctt ctccttggtc aggtacttgt cgaagcgata gcagcgcagg cgggcgccga
     1141 acgccacgtt ggcggcgaac tcggccggcg acagcttggc cttggccgga acgtccacca
     1201 tgatggcggc gttggcgtcg cccgcggtca gcaactgcgc caccgccgtt ccgcccacgg
     1261 cctgcgccgc cgccgcgtcc agcttttccg ccttgcccag gccgaccagc agcactcggt
     1321 tcacctcgag cccggcgggc gccaggatca tcagggtctg gtccttcttg ccctcgaact
     1381 tgctggcgtt gatggcccgc accaggccgc cgccggacgc ctggtccaat tgctcggcgg
     1441 cgagggtcag cttcttgccc tccatcacgc cgacggcgac ggcgccctcg gtcggaacct
     1501 gcggcttggc gaacgcgatc ttcatgctat gggatcctca tcggggaaat gcgttaaacg
     1561 atccccccaa tgtagcgatc cgtgcgtcga agggaagccc ggctatcgtt acggattggc
     1621 cgatgccgtt tccctttcgg cttcttcctc ggcctcgacc tcggcctcca tttcctcgac
     1681 cgggatgcgg gtgcccgaca gcaggaacac cagcccgccc ggcaaggcgg tcgccatggt
     1741 gacgacgccg aacaccaccg acagcacaag cgccgcctcg ggggccaggc cgacgaagcc
     1801 gaaggcggtg accatggcgg tctcgcgcac gccccagccg gcgatcgaga ttggcaacgt
     1861 catcgccagg atcaccggcg gcaccagcac caggcaatcc agcgcgtgga tgtcgaggtt
     1921 gaggccgatt gccaacaggt agaccgccat ggacaggttg gcgtggcccg ccatggcgac
     1981 cgccagggtg gccgccgcct tgaacggacg gaagaacagg gcgcgggtgt cggccgccag
     2041 ttgcgccagg ccgcgcacca cccgcagatg ccccagcgac tcgggcagcc ggtccatcac
     2101 cgacagcgcc aggatgccca cggtcgcgat cgccagcagc gcctggaaga tccagccgcc
     2161 cggcagctcg gggacgcgcg cctgcaggat gggctgggtg acgcagacca gcagcaccag
     2221 gccatagacg gtgacggcgc gctccagcat cacgctgttg acggcggtgt gcagcggcag
     2281 gccggccttg cgcgagaacc acatgcgcac ggcgtcgcca cccaccgcgc cgggcagcac
     2341 cagcgagaag aacacgccga tgtaatagac ggcgacggtc tgggcccatg agaaggcggc
     2401 gcccagcacc cgcagcacca tgccccagcg caccgcgccc aggccgatct gcacgatcat
     2461 caggccgatg gcggcgacca gcatccacgg gtcgatggcc ttggcctgcg cccaggcgga
     2521 tgcaagatcc accttggaca ggacccagga gatcaggccg acggacagac cgcccttcag
     2581 gacccaaggc aaccagcgct tgaccatcgt ccgacaaacc acccagccga aagaggggga
     2641 aggtttagca ggaaacgccg gaagggtgaa ccccgctcgg ccccagccgc accggcaacc
     2701 gcttgcggcc ccaatcgccc ggcttggcct cgaatatccc ggcgacggcc gtgccgcaat
     2761 cggggcagtg gccgtcgggg gagaggtgcc aggcggtcag ctcataccag tcgcggccga
     2821 tgagacgggc cccgcaggcg tggcaccagg tgctgccgcc gctctcgtcg tggacgttgc
     2881 ccgtatagac atgcctgacc ccattggcct tggcgatgga ccgggcgcgc gacagtgtcg
     2941 aggaggccgt ggggggcaag ccggacatct tccaggcggg atggaaagct gagaaatgta
     3001 acggcacgtc ggggccgagc gatgcgacca cccagcggct caaggcgtcg atttcggcgt
     3061 cggagtcgtt ctcgcccgga atgagaaggg tggtgatttc gaaccatacc gatgtttctt
     3121 ccttaagata gacgagcgtc tccagcaccg actgcagatg cccgccgcac aggttgcggt
     3181 agaagtcctc ggtgaacgcc ttcaggtcga cgttggcggc gtccatgtgc gcgaagaact
     3241 cgcgccgcgc ctcgggcgcc acatagccgg ccgtgacggc caccgtcttc agtccccgtg
     3301 cgtggcaagc cttcgccacg tccacagcat attccagaaa gatgaccgga tcgttgtagg
     3361 tgaaggccac cgagcggcag cccagttgct gggcggcggc ggcgatccga tcggggtcgg
     3421 ccgagtcgtt gaggcggtcg atctcgcgcg ccttcgagat gtcccagttc tggcagaact
     3481 tgcaggtcag gttgcagccg gcggtgccga aagacaggat cggcgtgccg ggcaggaaat
     3541 ggttcagcgg cttcttctcg atgggatcga cgcagaaccc cgacgagcag ccgtaggttg
     3601 tcagcaccat ggccccgtcc gcgcaggcgc gcacgaagca caatccgcgc tggccctcgt
     3661 gcagcttgca atagcgcggg cacaggtcgc actggacccg gccgtcgtcc agccgatgcc
     3721 aatggcgtgc gggaaagtgc gagccctgga cctcgatctc catggcgcca acgtacgctt
     3781 ccgtcatacc ccatacaaca ggtggatgac gtctccccct ccctcgaaca gccctaatcc
     3841 gtccggcgcg ctttacacga cgggggtagc ggggtttacc taaggcgagg tagaccgcga
     3901 ggccccgatg accgccatcc gccccaccgc cgtggccggc cagttctatc cggccgaacc
     3961 gggccagttg aaggcccaga tcgagcactt cctgagccag gccgagcgcg gcgacggccg
     4021 tgtgcccaag gcggtgatcg cgccccatgc cggctatgtc tattccggcc cggtggcggc
     4081 cagcgcctat gcgcgcctgc tgccggcgcg cgggcgcatc cgccgggtgg tgctgctggg
     4141 gccgtcgcac cgcgtcggct tccgcggcct ggcgttgggc accgccgagc aatgggcgtc
     4201 gccgctgggg ccggtgccca tcgaccgcgc cgccctggag tcgctgaagg gcgttcccat
     4261 ggtcgggctg ctcgaccagg cccatgccgc cgagcacagc ctcgaggtcc acgtcccctt
     4321 cct
//
LOCUS       DATIKR010000461         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_212809, whole genome shotgun sequence.
ACCESSION   DATIKR010000461 DATIKR010000000
VERSION     DATIKR010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212809"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2206)
                     /locus_tag="VLL76_07195"
     CDS             complement(<1..2206)
                     /locus_tag="VLL76_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HSV29326.1"
                     /translation="MSGLPEVQGLYDPRYEHDACGVGFIADIKNRKSHDVIQQGLKIL
                     KNLTHRGAVGADPLAGDGAGILIQLPDAFLRAEAAKIGITLPELGFYAAGTVFLPKDA
                     ALRAKCEALLDGLVKAEGQVVLGWRDVPTDASGLGETVKPTEPFVRMIFVGRGANCAD
                     QDAFERKLFVIRKQSENQVPQGAETDFYVPSLSSRTIVYKGMLLADQVGSYYKDLSDE
                     RMVSALALVHQRFSTNTFPSWPLAHPYRMVAHNGEINTLRGNVNWMNARRKAMSSPVL
                     GDDLKKLFPLIAEGQSDTACFDNALELLVMGGYSLPHAMMMLVPEAWSGNPLMDDKRR
                     AFYEYHAALMEPWDGPAAVCFTDGRTIGATLDRNGLRPARYLITEDDKIMMASEMGVL
                     TFAEDKIVKKWRLQPGKMLLIDLEKGCIVDDAEIKAQLSAAKPYQDWLNESQIILEEL
                     KIDVEPKGFDGDTLLDRQQAFGYTQEDVKFLMQPMAVTGQEAVGSMGTDTPIAVLSDK
                     PKPLFNYFKQCFAQVTNPPIDSIREESVMSLVSLIGPRPNLLGGHHGPEAKRLEVKQP
                     ILTNEDLEKIHRIEQVPDSGFRSVTLDITWPAADGAAGLEKALDAICAEAQAKVADGF
                     NILILSDRKVSAERIPMPSLLAVSAVHHHLIREGLRTQVGLVIETGEAREIHHMCCLA
                     GFGAEAINPYLAFETLEAMRPTLPEQLSSYEVQKRFIKGMDKAILKVMAKMGI"
BASE COUNT          428 a          826 c          872 g          475 t
ORIGIN      
        1 agatgcccat cttcgccatc accttgagga tggctttgtc catgcccttg atgaagcgct
       61 tctggacctc gtaggacgac agctgctcag gcagcgtcgg ccgcatggcc tccagcgtct
      121 caaaggcgag gtagggattg atcgcctcgg cgccgaaccc ggcaaggcag cacatgtggt
      181 ggatttcgcg ggcttcgccc gtctcgatca caaggccgac ctgggtgcgc aggccctcgc
      241 ggatcaggtg gtggtgcacc gccgacaccg ccagcagcga cggcatgggg atgcgctcgg
      301 ccgagacctt gcggtccgac aggatcagga tgttgaagcc gtcggcgacc ttggcctggg
      361 cctcggcgca gatggcgtcc agcgcctttt ccagaccggc ggcgccatcg gcggccggcc
      421 aggtgatgtc gagcgtgacc gagcggaagc cggaatccgg cacctgctcg atgcggtgga
      481 tcttctccag gtcctcgttg gtcaggatcg gctgcttgac ctcgaggcgc ttggcctcgg
      541 ggccgtgatg gccgcccagc aggttggggc gcgggccgat cagcgacacc aggctcatca
      601 ccgattcctc gcggatcgaa tcgatcggcg ggttggtgac ctgggcgaag cactgcttga
      661 agtagttgaa cagcggcttg ggcttgtccg acagcaccgc gatgggggtg tcggtaccca
      721 tggagccgac cgcctcctgg ccggtgacgg ccatgggctg catcaggaac ttgacgtctt
      781 cctgggtgta gccgaaggcc tgctgacggt cgagcagggt gtcgccgtcg aagcccttgg
      841 gctcgacgtc gatcttcagc tcttccagga tgatctgcga ctcgttcagc caatcctgat
      901 agggcttggc ggccgacagt tgcgccttga tctcggcgtc gtcgacgatg cagccctttt
      961 ccaggtcgat cagcagcatc ttgccgggct gcagacgcca cttcttgacg atcttgtcct
     1021 cggcgaaggt cagcacgccc atctcggacg ccatcatgat cttgtcgtct tcggtgatca
     1081 gatagcgggc cggacgcagg ccgttgcggt ccagcgtggc gccgatggtg cggccgtcgg
     1141 tgaagcagac ggcggcgggg ccgtcccacg gctccatcag ggcggcgtgg tactcataga
     1201 aggcgcggcg cttgtcatcc atcagcggat tgccggacca cgcctcgggc accagcatca
     1261 tcatggcatg cggcagcgaa tagccgccca tcaccagcaa ttccagcgcg ttgtcgaagc
     1321 aggcggtgtc cgactggccc tcggcgatca gcgggaacag cttcttgagg tcgtcgccca
     1381 gcaccggcga cgacatggcc ttgcgccgcg cgttcatcca gttgacgttg ccgcgcaggg
     1441 tgttgatctc gccattgtgc gcgaccatgc gatagggatg cgccagcggc caggacggga
     1501 aggtgttggt cgagaagcgc tggtgcacca gcgccagggc cgacaccatg cgctcgtccg
     1561 acaggtcctt gtaataggag cccacctggt cggccagcag catgcccttg tagacgatgg
     1621 tgcgcgacga cagcgaggga acgtagaaat cggtctcggc gccctgggga acctggtttt
     1681 ccgactgctt gcggatgacg aacagcttgc gctcgaaggc gtcctggtcg gcgcaattgg
     1741 cgccgcggcc gacgaagatc atgcgcacga acggctcggt cggcttgacc gtctcgccca
     1801 ggcccgaggc gtcggtggga acgtcgcgcc agcccagcac gacctggccc tcggccttga
     1861 ccaggccgtc gagcagcgct tcgcacttgg cgcgcagggc ggcatccttg ggcaggaaca
     1921 cggtgccggc ggcataaaag cccagttcgg gaagcgtgat gccgatcttg gcggcctcgg
     1981 cgcgcaggaa cgcgtcgggc agctggatca ggatgcccgc gccgtcgccg gccagcggat
     2041 cggcaccgac agcgccacga tgggtgagat tcttgagaat cttcaaaccc tgctggatga
     2101 cgtcgtgcga cttgcggttc ttgatgtcgg cgatgaagcc gacgccgcag gcgtcatgtt
     2161 cgtagcgcgg gtcataaagc ccctgaactt caggcaatcc gctcatctct actctgttcc
     2221 tcttcccggg ggccggtagg tttgccacag gcccgcggct gaattcaaag tttttcatgg
     2281 gaaacggccc gcccgtcccc acacatggtc gcgcggctcc gccgcccgtc cgagcaaaga
     2341 ggtcttcata cgccatcgcg gccccgtcgc caagtgcggg gagcgccaaa tggcgaggaa
     2401 tttgcctcct ttgggaggcg cgtcccctat agcggaaaag gaggggcgcg gcatactgcc
     2461 cccgagggta ggtccatccc catcccggaa ccccatccgc cgccacgtgt tgaccggacg
     2521 gcagttcccg gaggcgtcta tggcattcac cgaccgagtc ctcgagtccc tggtcgcgct
     2581 tgcgggcgcg ccgttgttct c
//
LOCUS       DATIKR010000462         3776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_54991, whole genome shotgun sequence.
ACCESSION   DATIKR010000462 DATIKR010000000
VERSION     DATIKR010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54991"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..1088)
                     /locus_tag="VLL76_07200"
     CDS             complement(198..1088)
                     /locus_tag="VLL76_07200"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008974 - phosphoribulokinase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HSV29327.1"
                     /translation="MSKQHPIIAVTGASGAGRGVVRSVFQRVCDREAIRPAFVEGESF
                     HRFTRAEMRDRTAEARAGGDTSFSHFGPAANVFAEQEKLYRAYGETGVARIRHYAHTA
                     DDARALGWPDVGAGEFTPWHDLPDPSDCLIYEGLHGVVKADGVDLSKLVDLKIGVTPI
                     MNLEWIQKMHRDTKVRGYSEEAVVEQILNRMPDYVRYVIPQFKISDINFQHVAVVDTS
                     DPMVARDVPTLDERVVVIRFRKPEEFGVDFPWLLSNLPKSWMSRRNTLVVPGSSYELA
                     MEMIITPILRRLMEWRKRGA"
     gene            1325..1401
                     /locus_tag="VLL76_07205"
     tRNA            1325..1401
                     /locus_tag="VLL76_07205"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1359..1361,aa:His,seq:gtg)
     gene            1702..2409
                     /locus_tag="VLL76_07210"
     CDS             1702..2409
                     /locus_tag="VLL76_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29328.1"
                     /translation="MLLIDANKLFREGLKKLLDGSAFMIAEEADSMAEGMQKLETGLK
                     PKIALVEFDASADDIGVLQQMREKYSDLKLVVLAASTRNIHNLARCFEAGADAYLLKN
                     ISPDALKQSLKLVLLGEKVFPTRLAAMLISGQVDTQRPAAASPDLEGLSEREIQILRC
                     LLNGHPNKVIAKKLNITEATVKVHLKGVLKKINAANRTQAAIWALNNGLSADNAPATP
                     RRPGAGAPPTPIEAGGI"
     gene            complement(2452..2886)
                     /locus_tag="VLL76_07215"
     CDS             complement(2452..2886)
                     /locus_tag="VLL76_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29329.1"
                     /translation="MTRLPLAGWAAMAALLAPHLALAQWNNEPYQFRSNIGGGAGMST
                     AYRQAIIDKELYGRRPENLVKGPDGRLLEVIERDQQAFLADPEPNFIVRRSGWASGGA
                     SVGVGGVAIGGWTAMVDGGPVTGYAGSQPSASPIDSWVGMLD"
     gene            complement(2943..3665)
                     /locus_tag="VLL76_07220"
     CDS             complement(2943..3665)
                     /locus_tag="VLL76_07220"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSV29330.1"
                     /translation="MIDATVNDAPSPAQVPVALAVEDTHMVSEIVGRFEPAERQDLRI
                     LDDPRSLVEHPEEAQAEVTIISYPVMKQLAKYHLDELSEFCRQNKVVLLIRSPEFLDS
                     IGFLEFVDGVIFADATIERVRDILQLSKAGYSILPSAAVMDIVTDRLRCDTLAKLSLI
                     ELSILDQVRLAKTNRAIARSLGLTEANVKTKVRAILKALKFQNRTEAAVFAARQNELI
                     RTSIARRGREKGVEPQDKGLPH"
BASE COUNT          645 a         1209 c         1280 g          642 t
ORIGIN      
        1 gtcatcgccg ggcttgaccc ggcgatccac gtggtagccg cgagttccgc tctgaaatca
       61 gcaccttagg cggagccgcg tggatggccg ggtcgagccc ggccatgacg atgttgtaaa
      121 gcaagagcgg cagacacccg gaaagaagac ggggatggcg ttcctcggcc cgaatagcca
      181 accgggcgta gccgccgtca cgctcccctc ttccgccact ccatcaggcg gcgcaggatc
      241 ggcgtgatga tcatttccat cgccagttcg tagctcgacc ccggcaccac cagggtgttg
      301 cggcggctca tccacgactt gggcaggttg ctcagcagcc aggggaaatc gacgccgaac
      361 tcctcgggct tgcggaagcg gatcaccacc acgcgctcgt ccagggtggg cacgtcgcgg
      421 gcgaccatgg ggtcggaggt gtcgaccacg gcgacgtgct ggaagttgat gtcgctgatc
      481 ttgaactgcg ggatcacgta gcggacgtaa tcgggcatgc ggttgaggat ctgctcgacc
      541 accgcttcct cggaatagcc gcgcaccttg gtgtcgcggt gcatcttctg gatccattcc
      601 aggttcatga tcggggtgac gccgatcttg aggtcgacca gcttggacag gtcgacgccg
      661 tcggccttca ccacgccgtg caggccctcg tagatcaggc agtcggaggg gtcgggcagg
      721 tcgtgccaag gcgtgaactc gccggcgccg acgtcgggcc agcccagggc gcgggcgtcg
      781 tcggcggtgt gcgcatagtg gcggatgcgg gccacgccgg tctcgccata ggcgcggtag
      841 agcttttcct gctcggcgaa gacgttggcg gcggggccga aatggctgaa gctggtgtcg
      901 ccgcccgcgc gggcctcggc ggtgcgatcg cgcatctcgg cgcgggtgaa gcggtggaag
      961 ctttcgcctt cgacgaaggc cgggcggatc gcctcgcggt cgcagacgcg ctggaagacg
     1021 gatcgcacga cgccccggcc ggcgccggac gcaccggtga cggcaatgat cggatgctgc
     1081 ttggacatgc ctgcctctcc aagaggagcg gtcgttgccg cgccttcgat tgttgccgaa
     1141 accatagcgc acgaaggagc aggtccgctt cacccggaga gggtggcgcc ggaggcgccg
     1201 ttcgaggggg acaggactat gcggcggggt gggcgcgatc ttttctccga tcgcgccccc
     1261 acgggcgtaa cagaagccct tgacgttggg ggggcgactt cgctaaacat gcggcctccc
     1321 ggtggcgggt gtagctcagt tggttagagc gccaggttgt ggtcctggat gtcgtcggtt
     1381 cgaatccgat cactcgcccc attcccccct cccgttccgc cttctccggc tggtgaaatc
     1441 accggtcggg ccgcgcattt ggtcgatcgc atacccgatt tcagtacggg ctttcgcgcg
     1501 cgaacggagc atcgctaccg attatgaacg cgcggctacc tcctacagaa ggtgggatcg
     1561 gcggcgcccg gtcggttaaa actcaatcca gaagatgcaa catacgggag cggcgccgtc
     1621 atcgggcggt gccgccctct acctccaatc tgcccgaagc cgccttccaa cgcacgggga
     1681 ctacacatgc agaacgtgga aatgcttctg atcgatgcga acaagctgtt ccgggaaggg
     1741 ctgaagaagc tgctcgacgg ctcggccttc atgatcgccg aggaagccga cagcatggcc
     1801 gagggcatgc agaagctcga gacgggcctg aagcccaaga tcgccctggt cgagttcgac
     1861 gccagcgccg acgacatcgg cgtgctgcag cagatgcgcg agaaatattc cgacctcaag
     1921 ctggtggtgc tggccgccag cacccgcaac atccacaatt tggcgcgctg cttcgaggcg
     1981 ggcgccgatg cctacctgct caagaacatc tcgcccgacg cgctgaagca gtcgctgaaa
     2041 ctggtcttgc tgggcgaaaa ggtgttcccc acccggctgg ccgccatgct gatctcgggc
     2101 caggtcgaca cccagcgccc ggccgccgcc tcgcccgatc tggaaggcct gtccgagcgc
     2161 gagatccaga tcctgcgctg cctgctcaac ggccacccca acaaggtgat cgccaagaag
     2221 ctgaacatca ccgaggcgac ggtgaaggtg catttgaagg gcgtgctgaa gaagatcaac
     2281 gccgccaatc gcacccaggc ggccatctgg gcgctcaaca acggcctgtc ggccgacaac
     2341 gcccccgcca cgccacgccg ccccggcgcc ggcgcgccgc cgaccccgat cgaggcgggc
     2401 ggcatctgag acaagaaggg gccgggcgct ccccggcccc ctctcgcccg ctcaatccag
     2461 cattcccacc caggaatcga tgggcgacgc cgatggctgc gacccggcat agccggtgac
     2521 ggggccgcca tccaccatgg ccgtccagcc gccgatggcg acgccgccga caccgacgct
     2581 ggcgccgccg ctggcccagc ccgatcggcg cacgatgaaa ttgggttccg ggtcggcgag
     2641 gaaagcctgc tggtcccgct cgatcacctc gagcaggcgg ccgtccggcc ccttgaccag
     2701 gttctctggc cggcggccgt acaattcctt gtcgatgatg gcctggcgat aggcggtgct
     2761 catgccggct ccgccgccga tgttgctgcg gaactggtag ggctcgttgt tccattgcgc
     2821 cagcgcgaga tggggggcca gcaaggcggc catggccgcc cagccggcaa gcggaagtct
     2881 ggtcatcgga tgctcccggt cagcctgtgc ccgaggcaca tgggccggcc gggatgcgtg
     2941 gttcagtgcg gcaatccttt atcctggggt tccaccccct tttcccggcc gcgccgcgcg
     3001 atcgacgtgc ggatcagctc gttctggcgg gcggcgaaca ccgccgcctc ggtgcggttc
     3061 tggaacttca gggccttgag gatggcgcgg accttggtct tgacgttggc ctcggtcagg
     3121 cccagcgaac gggcgatggc gcggttggtc ttggccagcc gcacctggtc gaggatcgac
     3181 agttcgatca aggacagttt cgccaaggtg tcgcagcgca ggcggtcggt gacgatgtcc
     3241 atgacggcgg ccgacggcag gatggaatag ccggccttgg acagttgcag gatgtcgcgc
     3301 acccgctcga tggtggcgtc ggcgaagatc accccgtcga cgaattccag aaagccgatg
     3361 gaatcgagga actcgggact gcggatcagc agcacgacct tgttctggcg gcaaaattcc
     3421 gaaagttcgt cgagatggta cttcgccagt tgcttcatca ccgggtacga gatgatggtg
     3481 acttcggcct gggcttcctc ggggtgctcg accagtgagc gggggtcgtc gaggatacga
     3541 agatcctggc gctcggccgg ttcgaagcgg ccgacaatct cgctcaccat gtgagtgtcc
     3601 tcgaccgcca gggcaaccgg cacctgggcg ggcgaagggg cgtcgttcac ggtcgcgtcg
     3661 atcatggcgc gcccttttct ttcagtttgg ggggagccga cgggtgtaca ggcgctcgaa
     3721 gctatcgaat tcctcgtccg agaaggtgtc gagcacctcg ttcaaccggc gccggc
//
LOCUS       DATIKR010000463         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_67754, whole genome shotgun sequence.
ACCESSION   DATIKR010000463 DATIKR010000000
VERSION     DATIKR010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67754"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /gene="ispH"
                     /locus_tag="VLL76_07225"
     CDS             complement(<1..741)
                     /gene="ispH"
                     /locus_tag="VLL76_07225"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HSV29331.1"
                     /translation="MTLPPLTIVLASPRGFCAGVDRAIHIVERAIEKYGAPVYVRHEI
                     VHNRFVVDSLKAKGAVFVDELDEVPDGVPVVFSAHGVPKSVPDAAEARGLDYLDATCP
                     LVTKVHREAEMHHDMGRQIIMIGHAGHPEVIGTMGQVPEGAVLLVENVEQAEAVAPRD
                     PSLLAYITQTTLSVDDSAAITAVLKRRFPDLVGPRKDDICYATTNRQNAVKTIAPRCD
                     AVMVIGAPNSSNSKRLVEVAARSGCERSI"
     gene            850..1377
                     /locus_tag="VLL76_07230"
     CDS             850..1377
                     /locus_tag="VLL76_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29332.1"
                     /translation="MTLRKILPFVAVASSVVLASCSVFEKKAPPPCPPVYILSDASTL
                     TKYREGKGRDLTDVEFEAEITGYKGECKYDDKGAVVDIEVIFSLKRGPADTDRKAEFE
                     YFVAVPLYYPSPQAKAVFPVTIPFLEGANHVKHFDEAVSMRIPVKDNDVIQKYEVYLG
                     FQTSAEELERNRKAK"
     gene            complement(1382..>1583)
                     /locus_tag="VLL76_07235"
     CDS             complement(1382..>1583)
                     /locus_tag="VLL76_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HSV29333.1"
                     /translation="LWPFEGDERAEIDDDKLLRMLGRYGYDVTEPEAAIAAFQRHFRP
                     ERVDGVADDGTAGRLARLLGAV"
BASE COUNT          260 a          533 c          525 g          265 t
ORIGIN      
        1 gatcgagcgc tcgcagccgc tgcgcgccgc cacctcgacc agccgcttcg agttggacga
       61 attgggcgcg ccgatcacca tcaccgcgtc gcagcgcggt gcgatggtct tgaccgcgtt
      121 ctggcggttg gtggtggcgt agcagatgtc gtccttgcgc ggccccacca gatcggggaa
      181 gcggcgcttc agcaccgccg tgatggccgc cgaatcgtcc accgacagcg tcgtctgggt
      241 gatgtaggcc agaagcgacg gatcgcgcgg cgccacggcc tccgcctgct cgacgttttc
      301 gaccagcagc accgcgccct cgggcacctg gcccatggtg ccgatgacct cggggtggcc
      361 ggcatggccg atcatgatga tctggcgacc catgtcatgg tgcatctcgg cctcgcgatg
      421 gaccttggtc accagcgggc aggtggcgtc gaggtaatcg aggccgcgcg cctcggcggc
      481 gtcgggcacc gacttgggca cgccatgggc cgagaacacc accggcacgc cgtcgggtac
      541 ctcgtccagt tcgtccacga acaccgcgcc cttggccttc aggctgtcca ccacgaagcg
      601 gttatgcacg atctcatggc ggacatagac gggggcgccg tatttctcga tggcgcgctc
      661 gacgatgtgg atggcgcgat cgacgccggc gcagaagccg cgcgggcttg ccagaacgat
      721 ggtcagcggg ggaagcgtca tgcctgggtt ccgtccgatg cgggccggtg ccaccttgtg
      781 tgcgggcgcc ggcttctcta aagtcgtcgc acacttagca gatatgctcc cgccccagga
      841 agttcctcca tgaccttgcg caaaatcctt ccgttcgtcg ccgtggcttc ctcggtggtg
      901 ctggcctcgt gctcggtgtt cgaaaagaag gcgccgccgc cctgtccgcc ggtctacatc
      961 ctgtcggatg cgagcacgct gaccaagtac cgcgagggca agggccgcga cctgaccgac
     1021 gtggaattcg aggccgagat caccggctac aagggcgagt gcaaatacga cgacaagggc
     1081 gccgtcgtgg acatcgaggt catcttctcg ctcaagcgcg gcccggccga caccgaccgc
     1141 aaggccgagt tcgagtattt cgtcgccgtc ccgctgtatt acccgtcgcc gcaggccaag
     1201 gcggtgttcc cggtcaccat cccgttcctg gaaggcgcca accacgtcaa gcatttcgac
     1261 gaggcggtca gcatgcgcat cccggtcaag gacaacgacg tgatccagaa gtacgaggtc
     1321 tatctcggct tccagacctc ggcggaagag ctggagcgaa accgcaaggc gaagtagccg
     1381 gtcagaccgc gcccagcagc cgcgccaacc gccccgccgt gccgtcgtcg gcgactccgt
     1441 cgacgcgctc ggggcggaag tggcgctgga aggcggcgat ggccgcttcg ggttcggtga
     1501 cgtcgtagcc gtagcgcccc agcatgcgca gcagcttgtc gtcgtcgatc tcggcccgct
     1561 cgtcgccctc gaacggccac agg
//
LOCUS       DATIKR010000464         1741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_152496, whole genome shotgun sequence.
ACCESSION   DATIKR010000464 DATIKR010000000
VERSION     DATIKR010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152496"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /gene="nrdR"
                     /locus_tag="VLL76_07240"
     CDS             complement(<1..444)
                     /gene="nrdR"
                     /locus_tag="VLL76_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HSV29334.1"
                     /translation="MRCPFCGHDDTQVKDSRPTEDNSAIRRRRSCPECGSRFTTFERV
                     QIRDLVVIKKDGARSPFDREKLLKSLRIALRKRPVDEDQIERIVNGIHRRLESMGENE
                     VPSKYIGELVMDVLMDLDKVAYVRYASVYRNFREAKDFEDFLGKMV"
     gene            complement(508..>1741)
                     /gene="glyA"
                     /locus_tag="VLL76_07245"
     CDS             complement(508..>1741)
                     /gene="glyA"
                     /locus_tag="VLL76_07245"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HSV29335.1"
                     /translation="DSDVFAAIQNELKRQQDQIELIASENIVSRAVLEAQGSVMTNKY
                     AEGYPGKRYYGGCEYVDVVETLAIERACKLFGCQFANVQPSSGSQANQGVFMALVQPG
                     DTIMGMSLAAGGHLTHGAAPNQSGKWFKAVQYGVRLQDAQIDFDEVEALAREHKPKLI
                     IAGGSAYPRTIDFARFRKLADEVGALFMVDMAHFAGLVAGGQYPNPFPHAHVVTTTTH
                     KTLRGPRGGMILTNDEAIAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALRPEFKDYA
                     KQVVDNARALADVLVRRGLAIVSGGTDSHLMLVDLRPKKLTGKAAEASLEHAGMTCNK
                     NGIPFDPEKPTITSGIRLGTPAATTRGFGVAEFQKVGELIGDVLDGLAANPEDNSAAE
                     KKARAEVAELCRRFPIYQ"
BASE COUNT          259 a          573 c          591 g          318 t
ORIGIN      
        1 gaccatctta cccaggaagt cctcgaagtc tttggcttcg cggaagttgc ggtagaccga
       61 ggcgtagcgg acataggcga ccttgtcgag gtccatcagc acgtccatca ccagctcgcc
      121 gatgtacttg gacggcacct cgttctcgcc catgctttcc aggcgacgat ggatgccgtt
      181 gacgatgcgc tcgatctggt cctcgtcgac ggggcgcttg cgcagcgcga tgcgcagcga
      241 cttcagcagc ttttcgcggt cgaacggcga gcgggcgccg tccttcttga tcaccaccag
      301 gtcgcggatc tgcacccgtt cgaaggtcgt gaagcgcgag ccgcattccg ggcacgagcg
      361 ccggcgccgg atggccgagt tgtcctcggt cgggcgcgaa tccttcacct gggtgtcgtc
      421 atggccgcag aacggacaac gcattgactt ttccccctgc gccttgggga cgccccctcc
      481 cccgggagcg cccctcggcc gtgttcgtta ctggtagatc gggaagcggc ggcacagctc
      541 cgccacttcg gcgcgggcct tcttttccgc cgccgaattg tcttccgggt tggccgccag
      601 accgtccagc acgtcgccga tcagctcgcc caccttctgg aactcggcca cgccgaagcc
      661 acgggtggtg gcggccgggg tgcccaggcg gatgcccgag gtgatggtcg gcttctcggg
      721 gtcgaacggg atgccgttct tgttgcaggt catgccggcg tgctcgaggc tggcctcggc
      781 ggccttgccg gtcagcttct tgggacgcag gtcgaccagc atcaggtgcg aatcggtgcc
      841 gcccgacacg atggcgaggc cgcgccgcac cagcacgtcg gccagggcgc gggcgttgtc
      901 caccacctgc ttggcgtaat ccttgaactc gggccgcagc gcctcgccga acgccaccgc
      961 cttgccggcg atcacgtgca tcagcgggcc gccctggatg cccgggaaga tggccgagtt
     1021 gatcttcttg gcgatcgcct cgtcattggt caggatcatg ccgccgcgcg gaccgcgcag
     1081 ggtcttgtgg gtggtggtgg tcaccacgtg ggcatgcggg aacgggttgg gatactggcc
     1141 gcccgccacc aggccagcga agtgggccat gtccaccatg aacagggcgc cgacctcgtc
     1201 cgccagcttg cggaagcggg cgaagtcgat ggtgcgcgga taggccgagc cgccggcgat
     1261 gatcagcttg ggcttgtgct cgcgggccag ggcctcgacc tcgtcgaagt cgatctgggc
     1321 gtcctgcaag cgcacgccgt actgcaccgc cttgaaccac ttgcccgact ggttgggcgc
     1381 ggcgccgtgg gtaaggtggc cgccggcggc cagcgacatg cccatgatgg tgtcgccggg
     1441 ctggaccagc gccatgaaca cgccctggtt ggcctgcgag cccgagctgg gctggacgtt
     1501 ggcgaactgg cagccgaaca gcttgcaggc gcgctcgatg gccagggtct cgaccacgtc
     1561 gacgtattcg cagccgccgt agtaacgctt gccgggataa ccctcggcat acttgttggt
     1621 catgaccgag ccctgcgctt ccagcacggc gcgcgagacg atgttctccg aggcgatcag
     1681 ctcgatctgg tcctgctgac gcttcagctc gttctgaatg gcggcgaaga catcggaatc
     1741 c
//
LOCUS       DATIKR010000465         1688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_30720, whole genome shotgun sequence.
ACCESSION   DATIKR010000465 DATIKR010000000
VERSION     DATIKR010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30720"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VLL76_07250"
     CDS             <1..676
                     /locus_tag="VLL76_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV29336.1"
                     /translation="THYNAELSAPAADKAKADAQAILMRLEAEAGAPAAALAAAKADL
                     EAKTKARAAIGDNVKKKVNDTIFWAFQLNMLGACFGMWLFTRVTQVVGRRLTFALGFS
                     AALVITALLYWKMQTPTDAYWMMFIMGAAQLGTFAGFAIYLPELFPSSLRSTGTSFCY
                     NLGRFAAAGGSFFSAVLTTKVYGGFEAPLPLRYSAITMCVIFIFGILILPFAPETKGK
                     PLPPEE"
     gene            complement(693..938)
                     /gene="xseB"
                     /locus_tag="VLL76_07255"
     CDS             complement(693..938)
                     /gene="xseB"
                     /locus_tag="VLL76_07255"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HSV29337.1"
                     /translation="MSKKQTPPKDFEEALKELEGILGEIERGEVGLEESLVKYERGTF
                     LIQHCQGVLNSAEKQIEAINKGPDGSLKTTPLAAEPC"
     gene            complement(972..1469)
                     /locus_tag="VLL76_07260"
     CDS             complement(972..1469)
                     /locus_tag="VLL76_07260"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29338.1"
                     /translation="MAERNDVALESFKSTRRTLDTNHRSWSINIHCVVGCMHNEIRSR
                     IIALAGATETVAAIRAIAAPFFDVLGTGDVRRALGWLKAHGDVAAVVADHRLTDASGV
                     TLLAAVQQRWPAVQRVLLADIEDMAQVIAGLHCGAVQHVMHKPLQARELLQIIRPGHP
                     RALAS"
BASE COUNT          266 a          576 c          522 g          324 t
ORIGIN      
        1 cacgcattac aacgccgaac tcagcgcccc ggcggccgac aaggccaagg ccgacgccca
       61 ggcgatattg atgaggctgg aggccgaagc gggcgcgccc gccgccgcgc tggccgccgc
      121 gaaagccgat cttgaggcca aaaccaaggc ccgggcggcg atcggcgaca acgtgaagaa
      181 gaaggtcaac gacaccatct tctgggcctt tcaactcaac atgctcggcg cgtgcttcgg
      241 catgtggctt ttcactcgcg tcacccaggt cgtgggccgg agattgacgt tcgccctcgg
      301 cttctccgcc gccctggtca tcacggccct gctctactgg aagatgcaga cccccaccga
      361 cgcctactgg atgatgttca tcatgggcgc tgcccagttg ggcacgttcg ccggcttcgc
      421 catctatctg ccggagctgt tccccagctc gctgcggagc accggcacga gtttctgcta
      481 caacctcggc cggttcgccg ccgccggcgg cagcttcttc tccgccgtgc tcaccaccaa
      541 ggtgtacggc ggattcgagg cgccgctccc gctgcgctac tcggccatca ccatgtgcgt
      601 gatcttcatc ttcggcatcc tcatcctgcc gtttgccccg gagaccaaag gcaaaccgct
      661 gccgccggag gagtaggaga cgacccgggg cgtcaacagg gctcggcggc cagtggcgtc
      721 gtcttcaatg aaccgtccgg ccccttgttg atcgcctcga tctgcttctc ggccgagttc
      781 aggaccccct ggcagtgctg gatgaggaac gtcccgcgct cgtacttgac gaggctctcc
      841 tccaggccga cctcgccgcg ctcgatctcg ccgaggatgc cctcgagttc cttgagcgct
      901 tcctcgaaat ccttcggcgg tgtctgcttc tttgacatgg agtgcattat accggccagg
      961 ctcgccttgt gtcacgacgc cagggcgcgt ggatggccgg gtcggatgat ttgcagcagt
     1021 tccctggcct gaagcggctt gtgcatgacg tgctggaccg cgccgcagtg caggccggcg
     1081 atgacctgcg ccatgtcctc gatgtcggcc agcagcaccc gctgcacggc cggccagcgc
     1141 tgctgcaccg ccgccagcag cgtcacgccg ctggcgtctg tcaggcgatg atcggcgacc
     1201 acggccgcca catcgccatg ggccttcaac caacccagcg cccgccgcac gtcgcccgtg
     1261 ccaagcacgt cgaagaacgg tgcggcgatc gccctgatgg ccgccacggt ttccgttgca
     1321 cctgccaatg caatgattcg cgatctgatt tcgttgtgca tgcacccgac cacgcaatga
     1381 atgttgattg accatgacct gtgatttgta tcgagcgtgc ggcgggtgga cttgaacgat
     1441 tccagcgcaa cgtcgttgcg ctcggccact gtcgggtgca tgggacgcat cagaatccgc
     1501 gggcggcgct gcgtgccatg gctaccgtct tcgattcccg cgcggctgcg tctggcgctc
     1561 gatggcctgg tcgatccatg cgatgcgctg ggcaacccag gccttcatct gctcgatatc
     1621 ctgttcgaag gtgatgcggt cgtggaaggg gcggcggtcg gtgggccaac gctctgcatt
     1681 tcgcccgg
//
LOCUS       DATIKR010000466         3668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_115626, whole genome shotgun sequence.
ACCESSION   DATIKR010000466 DATIKR010000000
VERSION     DATIKR010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115626"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1414)
                     /locus_tag="VLL76_07265"
     CDS             complement(56..1414)
                     /locus_tag="VLL76_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSV29339.1"
                     /translation="MIRKTLMAAGAAALVATTMLTPVSSQAAERKETYRLMELFAEVF
                     EKVRADYVEPVSDEELVEAALNGMLTSLDPHSSYLNQKSARDMEVSTRGEFGGLGIEV
                     TMENGWVKVVSPIDDTPAFRAGIQPGDFITHLDGEPVQGLTLSEAVDRMRGPANTDIR
                     LSVRRNGAQPFDVKLTRAVIKIQTVRSQAQGNIGYVRITQFSQTTDADLRRHMGNLKK
                     EIGKNLAGYVIDLRNNPGGLLDQAIAVSDDFLEKGEIVSTRSRKAEDTQRFNARAGDL
                     ADGLPLVVLINDGSASASEIVAGALQDHRRAIVLGSRSFGKGSVQTLIPLPGHGSMRL
                     TTAKYFTPSGRSIQAVGIEPDIKVLQSKVEPISVPERDRRSEASLRNALTNPDGSKAA
                     PAAPAPAAPAPGPESKAPAAEPAAEGAPQAIKLGDPAQDYQLARALDLIRGLSLYRAP
                     AN"
     gene            complement(1411..2805)
                     /locus_tag="VLL76_07270"
     CDS             complement(1411..2805)
                     /locus_tag="VLL76_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSV29340.1"
                     /translation="MAQAPDSDAAAADRRLRQLEEQLQKSRSEHEERKRKAREMADEL
                     AKLRADMVGAARAAQESEELLSELETQLEDLRSMEGEKSEALKRRSAQMTGVLTALQR
                     LAWRPTEALIAQPQSPADTVRSAILLRSAVPQIERSVAELKGEIDMMARLRADISDQK
                     KRIRTTAARLDDEHSRMKDLFLRKSQIQSVVVAETEESERRMRQLASEAEDLRDLVTR
                     LEEERQRRLAEAAAKAAAEKAAREAEVAARKAAREAEIAAEKAAREAKLAADRADKER
                     KERELAAARAAREAELRAQAEARQKELEAQKASREADAAAREAAAAKPMQSDKPFSMA
                     QGKMPFPARGKVVGRFGQANEVGVVNKGIDIATRKNAQVIAPHDGQVAFSGPFRGYGL
                     LLIIEHGEGYHTLLAGMARVDVAVGQRLLAGEPVGVMGQDEARPNLYVELRRNGQPVN
                     PLPWLTAHKSKVRG"
     gene            complement(2855..>3668)
                     /gene="gpmI"
                     /locus_tag="VLL76_07275"
     CDS             complement(2855..>3668)
                     /gene="gpmI"
                     /locus_tag="VLL76_07275"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HSV29341.1"
                     /translation="LLMGNFRADRAREILHALVDPAFDGFVRDRVVKFCGRAGLTEYS
                     KDLNAFLSALFPAESLDKILGQVVCEAGMTQLRIAETEKYAHVTFFFNGGREQVFPGE
                     DRILVPSPKVATYDLQPEMSAIEVTDKLVEAVGSGKYDVIVVNYANGDMVGHTGFLSA
                     AMKAAETVDACIGRLEQAVKAAGGAMLVTADHGNAECMRDNQSGQPHTAHTTGPVDVV
                     LVNPPAGISAIGNGRLADVAPTMLDLLGLDQPGEMSGRSLLVAEALDRRAAG"
BASE COUNT          490 a         1243 c         1292 g          643 t
ORIGIN      
        1 cagccgctcg atgtcgatcg tctcctcgtc gtcctcgtcg agggtcagca tggcgtcagt
       61 tcgccggggc gcggtacagc gacaggccgc ggatcaggtc gagcgcccga gccaactggt
      121 agtcctgcgc cggatcgccc agcttgatgg cctgcggcgc cccctcggcg gccggctcgg
      181 cggccggggc cttggattcc ggaccggggg ccggcgcggc gggagccggc gccgccggag
      241 cggccttgct gccgtccggg ttggtcaggg cgttgcgcaa gctggcttcc gagcggcggt
      301 cgcgctcggg cacgctgata ggctcgacct tggactgcag caccttgatg tcgggctcga
      361 tgccgaccgc ctggatcgaa cgtccggacg gggtgaagta cttggccgtg gtcaggcgca
      421 tggagccgtg gccgggcagc gggatcagcg tctgcaccga acccttgccg aacgagcgcg
      481 agcccaggac gatggcgcgg cgatggtcct gcagggcgcc tgccacgatc tcggacgccg
      541 aggccgaacc gtcgttgatc agcaccacca gcggcaggcc gtcggccagg tcgccggcgc
      601 gggcgttgaa gcgctgggtg tcctcggcct tgcgcgagcg ggtcgagacg atctcgccct
      661 tttccaggaa gtcgtcggac accgcgatgg cctggtcgag caggccgccc gggttgttgc
      721 gcaggtcgat gacgtagccc gccaggttct tgccgatctc tttcttgaga ttgcccatgt
      781 ggcggcgcag gtcggcgtcg gtggtctgcg agaactgggt gatgcggacg tagccgatgt
      841 tgccctgggc ctggctgcgc accgtctgga tcttgatgac ggcgcgggtc agcttgacgt
      901 cgaagggctg ggcgccgttg cggcgcaccg acaggcggat gtcggtgttg gccggaccgc
      961 gcatgcggtc gaccgcctcg gacagggtca ggccctggac cggctcgccg tcgagatggg
     1021 taatgaagtc gcccggctgg atgccggcgc ggaaggccgg ggtgtcgtcg atgggcgaca
     1081 ccaccttgac ccagccgttc tccatggtga cctcgatgcc caggccgccg aactcgccgc
     1141 gcgtgctgac ttccatgtcg cgcgcgcttt tctggttcag atagctggaa tgcgggtcga
     1201 gcgaggtcag catgccgttc agcgccgcct cgaccagttc ctcgtcgctc accggctcga
     1261 catagtcggc gcggaccttc tcgaaaacct cggcgaacaa ttccatcagc cggtaggttt
     1321 ccttgcgctc ggcggcctgc gaggaaacag gcgtcaacat ggtggtcgcg accaaagctg
     1381 ccgcgcccgc cgccatcaga gtcttacgaa tcatccacga accttacttt tatgtgccgt
     1441 gagccaaggc aacgggttga ccggctggcc gttgcggcgc agctcgacat agaggttggg
     1501 ccgggcttca tcctgtccca tcaccccgac aggctcgccg gccaatagcc gctggccgac
     1561 ggcgacgtcg acccgggcca tccccgcaag cagcgtatga tagccctcgc cgtgttcgat
     1621 gatcaagagc agcccatatc cccgaaacgg cccggagaac gccacctgac cgtcgtgggg
     1681 ggcgatcacc tgggcattct ttcgcgtggc gatgtctatg cccttgttga ccacgccgac
     1741 ctcgttggcc tgcccaaacc ggccgaccac cttgcctcgc gcgggaaacg gcatctttcc
     1801 ctgggccatg ctgaacggct tgtccgattg catcggcttg gcggcggcgg cttcgcgcgc
     1861 ggcggcgtcg gcctcgcggc tagccttctg cgcttccagc tccttctgac gcgcctcggc
     1921 ctgggcgcgc aattccgcct cgcgcgcggc acgggcggcg gccaattcgc gttccttgcg
     1981 ttccttgtcg gcgcggtcgg cggccagctt ggcctcgcgg gcggctttct cggcggcgat
     2041 ctcggcttcg cgcgccgcct tgcgggcggc cacctcggcc tcgcgggcgg ccttttcggc
     2101 ggcggccttg gcggcggctt cggccaggcg gcgctggcgc tcctcttcca accgggtcac
     2161 caggtcgcgc agatcctcgg cctcggaggc caactggcgc atgcggcgct cggattcctc
     2221 ggtctcggcc accaccacgc tttggatctg cgacttgcgc aggaacaggt ccttcatgcg
     2281 cgagtgttcg tcgtcgaggc gggcggcggt ggtgcggatg cgcttcttct ggtcgctgat
     2341 gtcggcgcgc agccgcgcca tcatgtcgat ctcgcccttg agctcggcca ccgagcgttc
     2401 gatctggggc accgccgagc gcagcaggat ggccgaacgc acggtgtcgg cggggctttg
     2461 cggctgagcg atcagggctt cggtggggcg ccaggccagg cgctgcagcg cggtcagcac
     2521 gccggtcatc tgggccgagc ggcgcttcag cgcctcggac ttctcgccct ccatggagcg
     2581 cagatcctcg agctgggtct ccagctcgga cagcaattcc tcgctttcct gggcggcgcg
     2641 ggcggcgccc accatgtcgg cgcgcagctt ggccaattcg tcggccatct cgcgcgcctt
     2701 gcgcttgcgc tcctcgtgct cgctgcggct tttctgcaat tgctcttcga gctggcgcag
     2761 ccggcggtcg gcggcggcgg catcggaatc gggcgcctgc gccaaggcag gcgccgcggc
     2821 cccgaacgtc agggcgaatg ccagcgcgag gaggctagcc cgccgcacgt cggtcgagcg
     2881 cctccgccac cagcagcgag cggccggaca tctcgcccgg ctggtccagg cccagcaggt
     2941 cgagcatggt cggggccacg tcggccaggc ggccgttgcc gatggcggaa atgccggccg
     3001 gcgggttgac cagcaccacg tccaccggcc cggtggtgtg ggcggtgtgg ggctggcccg
     3061 actggttgtc cctcatgcat tcggcgttgc cgtggtcggc ggtcaccagc atggcaccgc
     3121 cagcggcctt gaccgcctgc tccagccggc cgatgcaggc atccaccgtc tcggccgcct
     3181 tcatggccgc cgacaggaag ccggtatggc cgaccatgtc gccgttggcg tagttgacga
     3241 cgatcacgtc gtacttgccg ctgcccaccg cctcgaccag cttgtcggtg acctcgatcg
     3301 ccgacatctc gggctgcagg tcgtaggtgg cgaccttggg gctgggcacc aggatgcggt
     3361 cctcgccggg gaagacctgc tcgcggccgc cgttgaagaa gaaggtgacg tgggcgtatt
     3421 tctcggtctc ggcgatgcga agctgggtca tgcccgcctc gcacaccacc tggcccagga
     3481 tcttgtccag gctttccgcc gggaacagcg ccgacaggaa ggcgttgagg tccttggaat
     3541 actcggtcag gccggcgcgg ccgcagaatt tcaccacacg gtcgcggaca aagccgtcga
     3601 aggccgggtc caccagggca tgcaggatct cgcgggcccg gtcggcgcgg aaattgccca
     3661 tcagcagg
//
LOCUS       DATIKR010000467         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_6908, whole genome shotgun sequence.
ACCESSION   DATIKR010000467 DATIKR010000000
VERSION     DATIKR010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6908"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..1076
                     /locus_tag="VLL76_07280"
     CDS             72..1076
                     /locus_tag="VLL76_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HSV29342.1"
                     /translation="MHHAALLRESRRPVAIWLFTLAAMVAAMVALGGLTRLTGSGLSM
                     VEWNPHHLLPPLTGAEWDDAFAKYQATPEYRLVNAGMDLAGFQSIFWLEYVHRLWGRL
                     IGFAFALPLAYFAWCRLVDRPLLKRLGLIFALGAGQGGLGWFMVASGLVDHPEVSHFR
                     LAAHLAVALLILAALLWTALDLAGTRRPAPCPAWLAASLVMTTITWGAFVAGLDAGLV
                     YNTFPLMAGQWLPGDGLDILHAHGAVQFAHRVLAVTTVLALTLLALRWRPAWPAAAWS
                     WGQAALGIATLLLHVPIALAVLHQMGAVMLVALLTWALHGTERRKHEFTTKTPRHQEA
                     "
     gene            1129..1896
                     /locus_tag="VLL76_07285"
     CDS             1129..1896
                     /locus_tag="VLL76_07285"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSV29343.1"
                     /translation="MVFLSLSAHAMELTGKAEQGGLMVGKAHPGAEVTLDGRQVPVDA
                     DGRFLLGFGREAGPKAVLVVDGAVQDIAVAPRDWPIQRIDGLPPAKVTPDPQALARIK
                     AENELVAARRHQVSPKALFLTGVAPPADGPVSGVFGSQRVLNGEPRAAHSGVDVAAPT
                     GAPVRSVADGVVTMVHPDMYFTGITVMIDHGLGLQTVYAHLSRAEVAEGQRVGKGQQV
                     GAVGASGRATGPHLHWGASWLDVRLDPDSVMAALGGR"
     gene            complement(1882..>2004)
                     /locus_tag="VLL76_07290"
     CDS             complement(1882..>2004)
                     /locus_tag="VLL76_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV29344.1"
                     /translation="EDVELTLIKDGDHRLSRDQDIARLNRVLGDLLDLVASAPA"
BASE COUNT          268 a          681 c          728 g          327 t
ORIGIN      
        1 acggccgcga gtctagaccc tgttgccgcc gctgtcgcgg ggccatatga accgcgaaag
       61 gggtagcagg catgcaccac gccgcattgc ttcgcgaaag ccgccggccg gtggcgatct
      121 ggctgttcac gctggccgcc atggtggcgg ccatggtggc gctgggcggg ctgacgcggc
      181 tcaccggttc gggcctgtcc atggtggaat ggaacccgca ccacctgctg ccgccgctga
      241 ccggggcgga atgggacgat gccttcgcca aataccaggc gacaccggaa taccgcctgg
      301 tcaatgccgg catggacctg gccggcttcc aatccatctt ctggctggaa tacgtccacc
      361 gcctgtgggg gcgactgatc ggttttgcct tcgcgctgcc gctggcgtat ttcgcctggt
      421 gccggctggt ggaccgtccg ctgctcaagc ggctgggcct gatcttcgcg ctgggggcgg
      481 ggcagggggg cttgggctgg ttcatggtcg ccagcggcct ggtcgaccac cccgaggtca
      541 gccatttccg gctcgccgcc catctggcgg tggcgctgct gatcctggcg gcgctgctgt
      601 ggacggcgct cgatctggcg ggaacgcgcc ggccggcgcc gtgcccggca tggctggccg
      661 cgtccctggt catgaccacg atcacatggg gcgccttcgt cgccggcctc gacgccgggc
      721 tggtctacaa caccttcccc ttgatggcgg ggcagtggct gccgggggac ggcctggaca
      781 tcctgcatgc ccacggcgcc gtgcaattcg cccaccgcgt gctggcggtg acgacggtgc
      841 tggcgctgac gctgctggcg ctgcgctggc gccccgcctg gccggcggcg gcgtggagct
      901 gggggcaagc cgccctgggt atcgccaccc tgttgctgca cgtgcccatc gccctggccg
      961 ttctccatca gatgggagcg gtgatgctgg tcgctctgct aacatgggcg ctccacggaa
     1021 cggagcggcg gaaacatgaa ttcaccacca agacaccaag gcaccaagaa gcctgagagg
     1081 cgcgaccaag gtgccgcccg attgctgtct tggtgtcttg gtgtcttggt ggttttcctc
     1141 agcctgtccg cccacgccat ggagctgacg ggcaaggcgg aacagggcgg cctcatggtt
     1201 ggcaaggccc atcccggcgc cgaggtcacc ctcgacggcc gtcaagtgcc ggtggatgcc
     1261 gacggccgct tcctgctggg cttcggacgc gaggcggggc cgaaggcggt actggtggtg
     1321 gatggagcgg tccaggacat cgcggtggcg ccgcgcgact ggccgatcca gcgcatcgac
     1381 ggcctgccgc cggccaaggt cacccccgat ccccaggcgc tggcccgcat caaggccgag
     1441 aacgaactgg tggcggcgcg ccgccaccag gtgtcgccga aggcgctgtt cctgacgggc
     1501 gtggcgccgc cggccgacgg tccggtctcg ggggtgttcg gcagccagcg cgtgctcaac
     1561 ggcgagccgc gcgccgccca ttccggggtg gacgtcgccg cccccaccgg cgccccggtg
     1621 cgcagcgtcg ccgacggcgt ggtgacgatg gtccaccccg acatgtattt caccggcatc
     1681 acggtgatga tcgaccacgg cctgggcctg cagaccgtct acgcccacct gtcgcgcgcc
     1741 gaggtcgcgg aaggccagcg ggtgggcaag ggccagcagg tcggcgccgt cggcgcctcg
     1801 ggccgggcga cgggaccgca tctgcattgg ggtgccagtt ggctggacgt gcggctggac
     1861 cccgacagcg tgatggcggc tttaggcggg cgctgacgcc accagatcca gcaggtcgcc
     1921 cagcacccgg ttcagccgcg cgatgtcctg gtcgcgcgac agacggtggt cgccgtcctt
     1981 gatcagggtc agttcgacat cctc
//
LOCUS       DATIKR010000468         3100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_80046, whole genome shotgun sequence.
ACCESSION   DATIKR010000468 DATIKR010000000
VERSION     DATIKR010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80046"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VLL76_07295"
     CDS             complement(<1..190)
                     /locus_tag="VLL76_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV29345.1"
                     /translation="MAAAATQEQRYRTLIELGIALSAERNHERLMEKILQGAKSMTNA
                     DGGTLYLVTDDRQGLKFEI"
     gene            316..1830
                     /locus_tag="VLL76_07300"
     CDS             316..1830
                     /locus_tag="VLL76_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV29346.1"
                     /translation="MPYDSLRDFIRRLEEAGRLVRVSAPVSPHLEMTEIQTRLLAENG
                     PAVLFENVVREDGTKYAMPMLVNLFGTVERVAWGMDREPAQLREVGETLAFLKQPEPP
                     GGWREALDMLPLLKTVMAMKPKTVGGAPCQQVVYQGDDVDLSMLPIQGCWPGEPAPLI
                     TWPLVVTQGPDTKGDKRDNFNLGIYRMQVTGKNTTLMRWLKHRGGAQHYQRWAGRKSE
                     PMPAAVVIGADPGTIIAAVTPVPETLSEYQFAGLLRGRKVELVDCKTVPLKVPAEAEI
                     VLEGHVMLDEFGPEGPYGDHTGYYNNVEDFPVFRVSAITMRRDPIYLSTFTGRPPDEP
                     SVLGEALNEVFIPLLTQQFPEIVDFWLPPEGCSYRIAVVSMKKAYPGHAKRVMFGVWS
                     FLKQFMYTKFVIVVDDDIDARDWKDVMWAVSTRMDPARDITVVEGTPIDYLDFASPES
                     GLGGKLGLDATNKWPPETKREWGEKIRMKEEVVDKVSQRWVEYGLPGSGKPIWK"
     gene            1957..2322
                     /locus_tag="VLL76_07305"
     CDS             1957..2322
                     /locus_tag="VLL76_07305"
                     /inference="COORDINATES: protein motif:HMM:NF019903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV29347.1"
                     /translation="MSTAVAELHDRSAFRLKVSDPFVAEVIATVAADFGLTEREMMVA
                     SRDFRIWKPRMAAMYYARLLTQCSLPELGRVFGGRSHTTVLRAFRRCREMIDTDEQWA
                     ARMDRLLVKLVEKIVAPRQ"
     gene            2420..>3100
                     /locus_tag="VLL76_07310"
     CDS             2420..>3100
                     /locus_tag="VLL76_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29348.1"
                     /translation="MARIAVVEDEASLRADVVEYLSACGHQVVGCADGGALDQALAGS
                     PVDLVILDINLPGEDGFSIAKRLRDVSDVGIIMLTARNLGVDRVVGLEIGADVYLTKP
                     VELRELEAQVRTLARRLRTVAPAAPSAEAPAAGADGWAYDSVGWDLVAPGGSAIKLTA
                     TERIFVALLVARPGDPVSRSDIFKALGKREWDPSDRSVDSMVRRLRSKGEEALGRPLP
                     IEAVHGIGY"
BASE COUNT          518 a         1047 c         1008 g          527 t
ORIGIN      
        1 tgatctcgaa cttcaggccc tggcggtcgt cggtgaccag atagagcgtg ccgccgtcgg
       61 cattggtcat gcttttggcg ccctgaagga tcttttccat caggcgctcg tggttgcgct
      121 cggcggaaag agcgatgccg agttcgatca gcgtgcggta gcgctgctct tgcgtcgcag
      181 ctgcggccat gatcctgctc ctcaatcccc gacttcccca tgcctaggtt accccgaaat
      241 catgggcaag gccaatcctt gacggtggcc ggccttcagg cttctctagc atgcagtcag
      301 ccggaggacg cccctttgcc ttacgattcg cttcgcgatt tcatccgccg cctcgaggag
      361 gccggccggc tggtgcgcgt gtcggcgccc gtgtcgccgc atctggagat gaccgagatc
      421 cagacccgcc tgctggccga gaacggcccg gcggtgctgt tcgagaacgt ggtgcgcgag
      481 gacggcacga aatacgccat gcccatgctg gtcaacctgt tcggcaccgt cgagcgcgtc
      541 gcctggggca tggaccgcga gccggcgcaa ttgcgcgagg tcggcgagac gctggccttc
      601 ctcaagcagc ccgagccgcc cggcggctgg cgcgaggcgc tcgacatgct gccgctgctg
      661 aagaccgtca tggccatgaa gcccaagacg gtgggcggcg ccccgtgcca gcaggtggtc
      721 taccagggcg acgacgtcga tctgtccatg ctgccgatcc agggctgctg gccgggcgaa
      781 ccggcgccgc tgatcacctg gccgctggtg gtcacccaag gccccgacac caagggcgac
      841 aagcgcgaca acttcaacct gggcatctac cgcatgcagg tgaccgggaa gaacaccacc
      901 ctgatgcgct ggctgaagca tcgcggcggg gcgcagcatt accagcgctg ggccggcagg
      961 aaatccgagc cgatgcctgc cgccgtggtg atcggcgctg atcccggcac catcatcgcc
     1021 gcggtgacgc cggtgcccga gacgctgtcg gaataccagt tcgccggcct gttgcgcggc
     1081 cgcaaggtcg agctggtgga ttgcaagacg gtgccgctga aggtcccggc cgaggccgag
     1141 atcgtgctgg aaggccacgt catgctggac gagttcgggc ccgagggccc ctacggcgac
     1201 cacaccggct attacaacaa cgtcgaggac ttcccggtct tccgcgtctc ggccatcacc
     1261 atgcgccgcg accccatcta cctgtccacc ttcactggcc gcccgccgga cgagccgagc
     1321 gtgctgggcg aggcgctgaa cgaggtgttc atcccgctgc tgacccagca attccccgaa
     1381 atcgtcgatt tctggctgcc gcccgagggc tgctcctacc gcatcgccgt ggtgtccatg
     1441 aagaaggcct atcccggcca cgccaagcgc gtgatgttcg gcgtgtggag cttcctcaag
     1501 cagttcatgt acaccaagtt cgtcatcgtg gtggacgacg acatcgacgc gcgcgactgg
     1561 aaggacgtga tgtgggcggt cagcacccgc atggacccgg cccgcgacat caccgtggtc
     1621 gagggcacgc ccatcgacta tctggacttc gccagccccg aatccggcct gggcggcaag
     1681 ctcggcctgg acgccaccaa caaatggccg cccgagacca agcgggaatg gggtgagaaa
     1741 attcgcatga aagaggaagt cgttgacaaa gtctcacagc gatgggttga atatggatta
     1801 cccggatcgg gcaagccgat ctggaaatag ttacatctga ttcacatcgc tgcgcacaat
     1861 cgtcacaact tctcgcaagt cgcgggtgtg accgtggacg catgtgcagc atcatcccac
     1921 catggatttc gagttgcatc caagggggat gttgccatgt cgaccgccgt tgccgaattg
     1981 cacgaccgct ccgccttccg cctgaaggtc agcgatcctt tcgtggccga ggtgatcgcc
     2041 accgtcgccg ccgatttcgg cctgaccgag cgtgaaatga tggtcgcctc gcgcgacttc
     2101 cgcatctgga agccgcgcat ggccgccatg tactacgccc gcctgctgac ccaatgcagc
     2161 ttgcccgaac tgggccgggt gttcggcggc cgcagccaca ccaccgtgct gcgcgccttc
     2221 cgccgctgcc gcgagatgat cgacaccgac gagcaatggg ccgcccgcat ggaccgcctg
     2281 ctggtcaagc tggtggaaaa gatcgtcgcc ccgcgccagt aaggccgtca cacggcgtca
     2341 cacggcgtca tcgtttgcca tttgacgtca acttgtgtcg tgccgcacta tccgccgatt
     2401 gagtgcacgc gggggacgga tggcacgcat cgcagtggtc gaagacgaag cgtcgttgag
     2461 ggcggacgtg gtggaatacc tgtccgcctg tggccatcag gtggtcggct gcgccgatgg
     2521 cggcgcgctt gaccaggcgt tggcgggcag cccggtggac ctggtgatcc tcgacatcaa
     2581 cctgcccggc gaggacgggt tctccatcgc caagcgcctg cgcgacgtct cggacgtcgg
     2641 catcatcatg ctgaccgccc gcaacctggg cgtcgaccgc gtcgtcggcc tcgagatcgg
     2701 cgccgacgtc tacctgacca agccggtcga gttgcgcgaa ctggaagccc aggtccgcac
     2761 cctggcccgc cgccttcgga cggtggcgcc cgccgccccg tcggcggagg cgcccgccgc
     2821 cggcgccgac ggctgggcct atgacagcgt cggctgggat ctggtggcgc cgggcggctc
     2881 cgccatcaag ctgaccgcca ccgaacgcat cttcgtcgcc ctgctggtcg cccgccccgg
     2941 cgacccggtg tcgcgctcgg acatcttcaa ggcgctgggc aagcgggaat gggacccgtc
     3001 cgaccgctcg gtcgattcca tggtccgccg cctgcgctcg aagggcgagg aagccctggg
     3061 ccggccgctg cccatcgagg ccgtccacgg catcggctac
//
LOCUS       DATIKR010000469         2224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_67829, whole genome shotgun sequence.
ACCESSION   DATIKR010000469 DATIKR010000000
VERSION     DATIKR010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67829"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VLL76_07315"
     CDS             <1..1021
                     /locus_tag="VLL76_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HSV29349.1"
                     /translation="LFDPGRGDHIAEIAVDASLDDPRLDEAVGKAAAEKLREEVELVR
                     AGYPEFDIESFRAGHMTPVFFGSALKTFGVAELLRGIGRLAPPPLARKADARIVNPIE
                     EKVTGFVFKVQANMDPNHRDRIAFFRICSGKFRRGMKLKHVRSGKVMALVNPVFFLAR
                     DRELAEEAFPGDIMGIPNHGQLRIGDTLSESEDLNFLGIPTFAPEVLRRVRLDDPMKA
                     KQLKKALDDLAEEGVSQVFKPVDGSTWIVGVVGPLQFDVLTTRIESEYNIKAGFEDGG
                     FVTARWVAADDAKELERFAAAHKSNMAEDRDGSPVYLARNSWQLGRAQQDFPAVKFSA
                     TREQH"
     gene            complement(1070..1588)
                     /locus_tag="VLL76_07320"
     CDS             complement(1070..1588)
                     /locus_tag="VLL76_07320"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013162943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSV29350.1"
                     /translation="MPSFVAIDFETADNGRDSACSVALVMVRGGAVVDSVHHLIRPPR
                     SRFLFTHIHGIRWRDVADSPDFGELWPAIAGAIAEAPFLVAHNAPFDRGVLEGCCAAH
                     GIPAPRKNYVCTVQVAREMWNLPKNRLPDVCGHLGLALNHHDALSDATACAEILLAAV
                     RQGYDLGRRVRA"
     gene            complement(1588..>2224)
                     /locus_tag="VLL76_07325"
     CDS             complement(1588..>2224)
                     /locus_tag="VLL76_07325"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HSV29351.1"
                     /translation="QAPGPQPGDDPERPVVLGPDRVRGLGFATIFGRGNVAEQLDQGR
                     PMIQTVRILSLAILLAWAASPVLAADSKAEKIVELMRLLRLDQIYTPEALIAPMIADL
                     HKKSPHVPPEVMRIMEEEFGKEMPALAEFTARETIVMLDKYYTETEIDDLVTFYKSPT
                     GQKSIAIMPQVMQDIMRTTQPGAARLVAGAVQRAMQRLEAMETKQRRSGGS"
BASE COUNT          377 a          719 c          751 g          377 t
ORIGIN      
        1 cctgttcgac cctggccgcg gcgaccacat cgccgagatc gcggtggacg cgtcgctcga
       61 cgatccccgc ctggacgagg cggtgggcaa ggcggcggcc gagaagctgc gcgaggaagt
      121 ggaactggtg cgggccggct atcccgagtt cgacatcgag tcgttccgcg ccggccacat
      181 gaccccggtg ttcttcggct cggcgctgaa gaccttcggc gtggcggaat tgctgcgcgg
      241 catcggccgg ctggcgccgc cgccgctggc ccgcaaggcc gacgcccgca tcgtcaaccc
      301 gatcgaggaa aaggtcaccg gcttcgtgtt caaggtccag gccaacatgg accccaacca
      361 ccgcgaccgc atcgccttct tccgcatctg ctcgggcaag ttccggcgcg gcatgaagct
      421 caagcacgtg cgctcgggca aggtcatggc gctggtcaat ccggtgttct tcctggcccg
      481 cgaccgcgag ctggcggaag aggccttccc cggcgacatc atgggaatcc ccaaccacgg
      541 ccagttgcgc atcggcgaca cgctgtcgga gagcgaggac ctcaacttcc tcggcatccc
      601 gaccttcgcc cccgaagtgc tgcgccgcgt gcggctggac gacccgatga aggccaagca
      661 gctcaagaag gcgctggacg acctggccga ggagggcgtg tcccaggtgt tcaagccggt
      721 ggacggctcg acctggatcg tcggcgtggt cggcccgctg cagttcgacg tgctgaccac
      781 ccgcatcgaa tccgaataca acatcaaggc cggtttcgag gatggcggct tcgtcaccgc
      841 ccggtgggtc gcggccgacg atgccaagga actggaacgc ttcgccgccg cccacaagtc
      901 caacatggcc gaggaccgcg acggttcgcc cgtctacctg gcccgcaatt cctggcagct
      961 cggccgggcg cagcaggact tcccggcggt caagttctcg gcgacgcgcg agcagcatta
     1021 gcaatccatt cgtcatggcc ggtcacgccc ggccatgacg aataatgcat caggcccgca
     1081 cccgccggcc gaggtcatag ccctggcgaa ccgccgccag caggatctcg gcgcaggcgg
     1141 tggcgtcgga cagggcgtcg tggtggttga gggcgaggcc caggtggccg cacacgtcgg
     1201 gcaggcggtt cttcggcaaa ttccacatct cgcgcgccac ctggacggtg cagacgtagt
     1261 tcttgcgcgg ggcggggatg ccatgggcgg cgcagcagcc ttccagcacg ccgcgatcga
     1321 acggtgcgtt gtgggcgacc aggaagggcg cctcggcgat ggcgccggcg atggcgggcc
     1381 acaactcgcc gaaatcgggc gaatcggcga cgtcgcgcca gcggatgccg tggatgtggg
     1441 tgaacaggaa gcggctgcgc ggcggccgga tcaggtggtg gacggaatcc accacggcgc
     1501 cgcccctgac catcaccagc gccaccgaac aggcgctgtc gcggccgttg tcggccgtct
     1561 cgaagtcgat ggcgacgaag ctgggcatta actgccgccg gaccggcgtt gcttggtctc
     1621 catcgcttcc agccgctgca tcgcccgctg cacggcaccc gcgaccaggc gcgcggcgcc
     1681 cggttgggtg gtgcgcatga tatcttgcat cacctgcggc atgatggcga tggacttctg
     1741 accggttgga gatttgtaga atgtgaccag gtcgtcgatc tcggtctcag tatagtattt
     1801 atcgagcatg acgatagttt ctctggccgt aaactccgcc agcgcgggca tctctttgcc
     1861 gaactcctcc tccattatcc gcatcacttc tggtggtacg tggggtgact tcttgtggag
     1921 atccgcgatc atcggggcaa tgagggcttc gggggtgtag atttggtcga gccggagcag
     1981 ccgcatcaat tcgacgatct tctcggcctt gctgtcggcc gcaagcacgg gcgacgcagc
     2041 ccaggccagc aatatggcca gggaaaggat acggacggtt tggatcatgg ggcgtccttg
     2101 gtcgagctgt tccgccacat taccacgacc aaagatggtg gcaaacccta ggcctcgaac
     2161 tcgatctggg ccgaggacga caggtcgttc tgggtcatca cccggttgcg gccctggcgc
     2221 ttgg
//
LOCUS       DATIKR010000470         1789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_67844, whole genome shotgun sequence.
ACCESSION   DATIKR010000470 DATIKR010000000
VERSION     DATIKR010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67844"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..638)
                     /locus_tag="VLL76_07330"
     CDS             complement(153..638)
                     /locus_tag="VLL76_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HSV29352.1"
                     /translation="MPSFDIVSKTDMAEVDNALAGVTREISQRFDFKGAKCSVERKDE
                     TITVLADDDAKLKQMHELLKVHFTRRQVDPKALDFQKVEAASGNTVRQQVVVKQGIAT
                     ELAKKLVKEIKDSKIKVQASIQGDELRVTGKKRDDLQEAIALVRKLDVDQPLQYVNFR
                     D"
     gene            801..1364
                     /locus_tag="VLL76_07335"
     CDS             801..1364
                     /locus_tag="VLL76_07335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSV29353.1"
                     /translation="MGRVARTAAALALLTLAACAERAPPPDPIPPPEPRPRAELSKPR
                     GHYKIGPPYRINGVLYVPKLDYGYQDSGTASWYGNSFHGKLTANGERFDENDLSAAHQ
                     TLPLPSLVRVTNLDNGRSLTLRVNDRGPFVAGRILDVSKKAAKMLGFHGRGTARVRVM
                     VLEKESRALAAKYGIRHPEPEEGKPSS"
     gene            1458..1772
                     /locus_tag="VLL76_07340"
     CDS             1458..1772
                     /locus_tag="VLL76_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29354.1"
                     /translation="MKTLSKTVLALSGLLLLAGCSALAEDTTPKAVGPGYGPGWRHEQ
                     MVQARQNGQLPPAAMMRGPGMMRGQGPGAAAIGPDGKVDTSKLPAWCPYNTASDAKDT
                     AK"
BASE COUNT          278 a          629 c          568 g          314 t
ORIGIN      
        1 ggggcctttt tcttttaccc tcgcccgctt gcgggagagg gtggcgagca tcgcgagccg
       61 ggtgagggcg ggccccaagg tgggtgccgg cttgccctca ccctcccatg ctgcgcatgg
      121 gcccctccct ctcccgcaag cgggcgaggg gcttaatccc ggaaattcac gtattgcagc
      181 ggctggtcca cgtccagctt gcggaccagg gcgatggcct cctgcaaatc gtcgcgcttc
      241 ttgccggtga cgcgcaattc gtcgccctgg atcgaggcct ggaccttgat cttgctgtcc
      301 ttgatctcct tgaccagctt tttcgccaat tcggtggcga tgccctgttt gaccacgacc
      361 tgctggcgca cggtgttgcc cgaggcggcc tcgaccttct ggaaatccag cgccttgggg
      421 tcgacctggc ggcgggtgaa gtggaccttc agcaattcgt gcatctgctt cagcttggcg
      481 tcgtcgtcgg ccagcacggt gatggtctcg tccttgcgtt cgaccgagca tttggcgccc
      541 ttgaagtcga agcgctgcga gatctcgcgg gtgacgccgg ccagggcgtt atcgacctcg
      601 gccatatcgg tcttggaaac gatgtcgaag gacggcatgg cgtgtctcgg ctccccgggc
      661 gttgatgatt gcgtcaagaa ttagcgcaag gccggcgctt tggctacccg tgcctgtgtc
      721 cttttgcggg cgctcggctg ccgtcctacc gtccgtcatc cccgaacggg taggctgtcg
      781 catcccttgt ggaggatgcg atgggacgag tcgcccggac tgccgccgcc cttgccttgc
      841 tgaccctcgc cgcctgcgcc gaacgcgcgc cgccgcccga tcccatcccg ccgcccgagc
      901 cgcgcccccg ggccgaattg tccaagccgc gcggccatta caagatcggg ccgccctatc
      961 gcatcaacgg cgtgctctat gtgcccaagc tggattacgg ctaccaggac agcggcaccg
     1021 cctcgtggta cggcaacagc ttccacggca agctgaccgc caacggcgag cgcttcgacg
     1081 agaacgacct gtcggccgcc caccagacgc tgccgctgcc cagcctggtg cgggtcacca
     1141 acctggacaa cggccgctcg ctgacgctcc gcgtcaacga tcgcgggccg ttcgtcgccg
     1201 gccgcatcct cgacgtgtcg aagaaggccg ccaagatgct gggctttcat ggccgcggca
     1261 cggcgcgggt gcgggtgatg gtgctggaga aggagagccg cgccctggcc gccaaatacg
     1321 gcatccgcca ccccgagccg gaggagggca agcccagttc ctagttacac accgttaccg
     1381 tcccggacat cattgggata ccggcgcatg gtcaaatggc ttcatggaaa caaggatctc
     1441 cgcaacagga ggataccatg aagaccctga gcaagaccgt cctcgccctg tccggcctcc
     1501 tgctgctcgc cggttgcagc gccctcgccg aggacaccac ccccaaggcc gtcggccccg
     1561 gctatggccc cggctggcgc catgaacaga tggtccaggc ccgtcagaac ggccagttgc
     1621 cgcccgccgc gatgatgcgc ggtcccggca tgatgcgcgg ccagggcccc ggtgccgccg
     1681 ccatcggccc cgacggcaag gtggacacca gcaagctgcc ggcctggtgc ccgtacaaca
     1741 ccgcctccga cgccaaggac accgccaagt agcgggtccc ggccggctc
//
LOCUS       DATIKR010000471         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_127738, whole genome shotgun sequence.
ACCESSION   DATIKR010000471 DATIKR010000000
VERSION     DATIKR010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127738"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VLL76_07345"
     CDS             complement(<1..267)
                     /locus_tag="VLL76_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HSV29355.1"
                     /translation="MTMRQTFELMKLRIALMIALTALTGYGAVADEVSLSSALALMAA
                     MVLGSGASAVFNHVWDRDIDGRMKRTRNRPLASGALRPAGALWLA"
     gene            complement(279..701)
                     /locus_tag="VLL76_07350"
     CDS             complement(279..701)
                     /locus_tag="VLL76_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HSV29356.1"
                     /translation="MDTASILPHVTAGLNGAALALLLAGFALIRTGRRLWHRRVMLAA
                     VATSGLFLVAYLVYHATAPIFVFRGTGWIRPAYYSLLISHVVLAAAVTPLIGLTLWRA
                     LTGRIDGHRGLARWTLPLWLYVSASGITVYALLYHVYA"
     gene            1009..>1517
                     /locus_tag="VLL76_07355"
     CDS             1009..>1517
                     /locus_tag="VLL76_07355"
                     /inference="COORDINATES: protein motif:HMM:NF021472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HSV29357.1"
                     /translation="MRPTTRVFPHDGAMAPEPVPVIRPVSVERSATWLDRGFKDFLAH
                     PRIGLTYGAVFAGLGWLLTFGLHGLGMDSLILPLASGFMLVGPLAAVGLYEVSRRREL
                     GTDDGMTIGQAIAAIRRNGQIADMGMVLLLLFFAWFQLAMILFALFYGGNPPALTEFW
                     SQIVMAPQG"
BASE COUNT          246 a          522 c          513 g          236 t
ORIGIN      
        1 ggccagccac aaagccccgg ccgggcgcag ggcgccgctg gccaacgggc ggttgcgggt
       61 gcgcttcatg cggccgtcga tgtcgcggtc ccaaacgtgg ttgaacaccg ccgaggcgcc
      121 cgagcccagc accatggccg ccatcagcgc cagcgccgac gacaggctga cctcgtcggc
      181 gacggcgccg tagccggtca gcgcggtcaa cgcgatcatc aaggcgatgc gcagcttcat
      241 cagctcgaag gtttggcgca tggtcatgcc cggcctccct aggcgtagac gtggtacagc
      301 agggcataga ccgtgattcc cgaggcgctg acatacagcc acagcggcag ggtccagcgc
      361 gccaggccgc gatgcccgtc gatgcggccg gtcagcgccc gccacagggt cagcccgatc
      421 agcggggtga cggcggcggc caggaccaca tggctgatca gcagggaata ataggccggc
      481 cggatccagc cggtgcccct gaacacgaag atgggggcgg tggcgtggta gaccagatag
      541 gccacaagga agaggccgct ggtcgccacg gcggccagca tgacgcggcg gtgccacagc
      601 cgccgccccg tccggatcag cgcgaacccc gccagtagca gcgccagggc cgcgccgttc
      661 aggccggcgg tgacgtgcgg caggatcgac gcggtgtcca ccctatcccc ccagcatcac
      721 cccgaaccgc agcagcgtgg cggcgtaaag ccccgcggcc acgctcgcca gcagcgccag
      781 ggtcagcatg cgcttgcccg atttcgtcac gatggtcccc ggaagttgat ttgcctgcat
      841 ggttatttgg gaagcgcgga tggggcggga aagggtgcct aggccaagag gggtggtgac
      901 aaaagcgggt catcccttgg cgtgattgct caaagcccct tccagcgagt aggctatttg
      961 aaaatgcgga cgaagaagcc gcgtccaatc attcggaggc ttccccccat gcgccccacc
     1021 acccgcgtct tcccgcacga cggcgccatg gcgcccgagc ccgtgccggt catccggccg
     1081 gtcagcgtcg agcgctcggc cacctggctt gatcgtggct tcaaggactt cctcgcccat
     1141 ccccgcatcg gcctgaccta tggcgccgtg ttcgccggcc tgggttggct gctgaccttc
     1201 ggcctgcacg gccttggcat ggattcgctg atcctgccgc ttgcgtcggg gttcatgctg
     1261 gtcggcccgc tggccgccgt cggcctgtac gaggtcagcc gccgccgcga gctgggcacc
     1321 gacgacggca tgaccatcgg ccaggccatc gccgccattc gccgcaacgg ccagatcgcc
     1381 gacatgggca tggtgctgct gctgttgttc ttcgcctggt tccagttggc gatgatcctg
     1441 ttcgccctgt tctacggcgg caacccgccg gcgctgaccg agttctggtc gcagatcgtg
     1501 atggcgcccc aaggtag
//
LOCUS       DATIKR010000472         1840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_152540, whole genome shotgun sequence.
ACCESSION   DATIKR010000472 DATIKR010000000
VERSION     DATIKR010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152540"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VLL76_07360"
     CDS             <1..651
                     /locus_tag="VLL76_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004359537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HSV29358.1"
                     /translation="VWRGEIQARGLGMKVEVFDDDGKPVEGRKGELVCTQAFPSMPVG
                     FWNDPDGEKYRKAYFDKYPGIWTHGDWVELTRHGGIVVYGRSDATLNPGGVRIGTAEI
                     YRQVEQFDEVLESLVIGQDWSGDVRVVLFVRLRPGLKLDQSLADSIKKKIRDNTTPRH
                     VPAKVVQVEDIPRTKSGKIVELAVRDVVHGRAVKNREALANPEALELYKDVDDLKG"
     gene            complement(641..1333)
                     /locus_tag="VLL76_07365"
     CDS             complement(641..1333)
                     /locus_tag="VLL76_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020484691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HSV29359.1"
                     /translation="MRRADRLFQIVQCLRGGRMVTARDLAQRLEVSERTIYRDMRDLM
                     ATGVPIDGEAGVGYVLRGGFDIPPLMFTRDELEAVLLGVRMVQAWAGAQLVEAAAEAM
                     AKIESVVPEPLRDSLSRSRVYAPDFSLPRELRVLLDQTRDAIGARRVVRIDYAREDGT
                     MSSRTCRPLGLHFWGKVWTLASWCELRQEFRTFRLDRIQRLAAQDRTFRDEPGRTLAD
                     FMRRVTGDRVSP"
     gene            complement(1350..1721)
                     /locus_tag="VLL76_07370"
     CDS             complement(1350..1721)
                     /locus_tag="VLL76_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012205854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV29360.1"
                     /translation="MNPVAVWFEIATTDLDRAETFYRAVLGHPMRRENSPDGSLEMSV
                     FDPPDTEFKGALVKGEHFTPGMAGTLVYFNGGRDLAEPLSRVETAGGRVVMPKTAIGP
                     YGHIAMFIDSEGNRVGIHSME"
BASE COUNT          324 a          605 c          620 g          291 t
ORIGIN      
        1 gtgtggcgcg gcgagatcca ggcgcgcggg ctgggcatga aggtcgaggt gttcgacgac
       61 gacggcaagc cggtggaagg ccggaagggc gagttggtct gcacccaggc cttcccatcc
      121 atgccggtgg gcttctggaa cgaccccgac ggcgagaagt accgcaaggc ctatttcgac
      181 aaatatcccg gcatctggac ccatggcgac tgggtcgagc tgacccgcca tggcggcatc
      241 gtcgtctatg gccgctcgga cgcgaccctc aatcccggcg gcgtgcgcat cggcaccgcc
      301 gagatctacc gccaggtcga gcaattcgac gaagtgctgg aaagcctggt gatcggccag
      361 gattggagcg gcgacgtgcg cgtggtgctg ttcgtccgcc tgcgcccggg gctgaagctg
      421 gaccagagcc tggccgattc catcaagaag aagatccgcg acaacaccac gccccgccac
      481 gtgccggcca aggtggtgca ggtcgaggac atcccgcgca ccaagtcggg caagatcgtc
      541 gagctggcgg tgcgcgacgt ggtccacggc cgcgccgtca agaaccgcga ggccctggcc
      601 aacccggagg cgctggagct ttacaaggac gtggatgacc tcaagggctg acgcgatccc
      661 ccgtcacccg ccgcatgaaa tcggccaggg tgcgacccgg ttcgtcgcgg aaggtgcggt
      721 cttgggcggc cagacgttgg atgcggtcca ggcggaacgt gcggaattcc tgtcgcagct
      781 cgcaccaact ggccagggtc cacaccttgc cccaaaaatg cagccccaac ggccggcagg
      841 tgcgcgacga catggtgccg tcctcgcgcg catagtcgat gcggacgacc cgccgggcgc
      901 ctatggcgtc gcgggtctgg tcaagcagga cccgcaattc cctgggcagg ctgaaatccg
      961 gcgcgtacac gcgagaacgg gaaaggctgt cgcgcagcgg ctctggcacc acgctctcga
     1021 tcttggccat cgcctcggcg gccgcttcca ccagttgcgc gccggcccag gcctggacca
     1081 tgcgcacgcc cagcagcact gcctccagtt cgtcgcgggt gaacatcagg ggcgggatgt
     1141 cgaaaccgcc gcgcagcaca tagcccacgc cagcctcgcc atcgatcggg acgcccgtcg
     1201 ccatcaaatc gcgcatgtcg cgatagatgg tgcgttcgga tacctccagc cgctgggcga
     1261 ggtcgcgcgc ggtgaccatg cggccaccgc gcaggcattg cacgatctgg aacagccggt
     1321 ccgcgcggcg catgccccct ccctttcccc tattccatgg aatgtatccc gacccggttg
     1381 ccctcgctat cgatgaacat ggcgatgtgg ccgtaggggc cgatggcggt cttgggcatc
     1441 accacgcggc cgcccgccgt ttccacccgg gacaagggct cggccaggtc gcggccgccg
     1501 ttgaaataga ccagggtgcc ggccatgccg ggggtgaaat gctcgccctt gaccagggcg
     1561 cccttgaact cggtgtcggg cggatcgaag accgacatct cgagactgcc gtcgggcgag
     1621 ttctcgcgcc gcatgggatg gcccaggacg gctcggtaga aagtctcggc gcggtccagg
     1681 tcggtggtcg cgatttcaaa ccatacggca acggggttca tgtttgtcct ccggtgtttg
     1741 tcgatggcta gtgatagcaa acccatcctg acagcatggt gtcaggaggg tttcgcctca
     1801 accctcgacg cccggcaggg taaaccggaa ggtcgcgccg
//
LOCUS       DATIKR010000473         3330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_18631, whole genome shotgun sequence.
ACCESSION   DATIKR010000473 DATIKR010000000
VERSION     DATIKR010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18631"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..972)
                     /locus_tag="VLL76_07375"
     CDS             complement(<1..972)
                     /locus_tag="VLL76_07375"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV29361.1"
                     /translation="MRVAPRKGLSLGGKVLLIALAATFLVVAAAEAYRLWAIRQDRLA
                     LLVQKAERMADVQAVAMSRPMFDYDREVVGVLVEAMAGDPDVVWVSVVGTDGAVFGQL
                     GRDTGEGAGQVVTRRAITYRYNGVDEKVGSLVIGFSSEAADRDVRNSMQFSLGGMAAV
                     LIALSLAITWSVRRITIPLREMTGVLLRLADGDKEVRVTRTDRADEIGDIARAAEVFR
                     QHAVQIERLETAKATEAALRESEERLRLIVDSMPVPVVMTRMADHRILFANRQVRLLL
                     GDEIEPVGTPTRDFYVNPADRDRLLDQMTEKGSIDSFEAQLRRADGST"
     gene            complement(969..1721)
                     /locus_tag="VLL76_07380"
     CDS             complement(969..1721)
                     /locus_tag="VLL76_07380"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV29362.1"
                     /translation="MRRAWVVVALLALAPRLAEAQAVRLCTTEWPPYTVGSGAVVDGV
                     HTRMVLEAFRRVGLKATIDSVAWERCWNELAKGSYDGIYSASYNDERAQVARYPWTPL
                     QSLSYVAVVRRGQGRDWTGDDLGKLPQPLASPRGYSITAILRKAVGAVDDGAMKDAQN
                     LEKLVAGRVGTAVVEAAVARVLIRDMGIADRVEVLPAPVGPPRDYFLVIGHKAGGSEA
                     ASSDLTSRLDAVLEEIRREGMVDRLLNEAGVR"
     gene            complement(1832..2731)
                     /locus_tag="VLL76_07385"
     CDS             complement(1832..2731)
                     /locus_tag="VLL76_07385"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29363.1"
                     /translation="MKNLICVAVAALALLGWRAEARAEAVQIRHGGLALNGNLALADA
                     KTVKDGMVLITHGTLAHNGMEIIKAMQAGLAERGLSSLAITLSLGLDNRQGMYDCAVP
                     HRHRHADALDEIGAWVGWVKGQGASRLVLMGHSRGGAQTAWYAAERADASVSKVVLLA
                     PATWEEKAEQAQYQARYGTPLAAPLAKAAALVKAGKPAEMMAATDFIYCPKATVAAGS
                     FVGYYQPEPRLGVMASLPRIKVPTLVVAAAQDEVVKGLPEAVKPLADAGRVKLVTIPN
                     ADHFFLDLAADDAADAIKEFVAQ"
     gene            complement(2815..>3330)
                     /locus_tag="VLL76_07390"
     CDS             complement(2815..>3330)
                     /locus_tag="VLL76_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HSV29364.1"
                     /translation="DAGAMLGALYGAGIGRVAHGPMPADLNRTGGEAAVRRALAFLID
                     RDPAALEPSVADRPTAAFNLTILAHLVGTPYLPDLSGHVVMVEEVSEAMYRIDRALGQ
                     IASNPALRNVAGLMLGRCGDVPPNDPDFVLGEEEVARYWCARAAIPYLGRADIGHDID
                     NKVVPFGAWRP"
BASE COUNT          494 a         1197 c         1141 g          498 t
ORIGIN      
        1 ggtcgagccg tcggcccgtc gtaattgcgc ctcgaagctg tcgatgctgc ccttttcggt
       61 catttggtcc aacagccggt cgcggtcggc cggattgacg tagaagtcgc gggtcggcgt
      121 gcccaccggt tcgatttcgt cgcccagcag caaccgcacc tggcggttgg cgaacaggat
      181 gcggtggtcg gccatgcgcg tcatcaccac cggcaccggc atggaatcga cgatcaggcg
      241 cagccgctcc tcgctttcgc gcagggccgc ctcggtcgcc ttggcggtct cgagccgttc
      301 gatctgcacc gcgtgctggc ggaacacctc ggcggcgcgg gcgatgtcgc cgatctcgtc
      361 ggcgcggtcg gtgcgcgtca cccgcacctc cttgtcgccg tcggccaggc gcagcagcac
      421 gccggtcatc tcgcgcagcg ggattgtgat gcgccgcacg ctccaggtga tcgccagtga
      481 cagcgcgatc agcaccgccg ccatgccgcc caggctgaac tgcatggaat tgcggacgtc
      541 gcggtcggcg gcctcggacg agaagccgat gaccagcgac ccgacctttt catcgacgcc
      601 gttgtagcgg taggtaatgg cgcggcgggt gaccacctgt cccgcgccct cgccggtgtc
      661 gcggccgagt tggccgaaca cggcgccatc ggtgccgacg acgctgaccc acaccacgtc
      721 ggggtcgccc gccatggcct cgaccagcac gcccaccacc tcgcggtcat agtcgaacat
      781 gggccgcgac atggcgacgg cctgcacgtc ggccatgcgc tcggccttct gcaccagcag
      841 cgccaggcga tcctggcgga tggcccacag gcgataggcc tcggccgccg ccaccaccag
      901 gaaagtggct gccagggcga tcagcagcac cttgccgccc agcgacaacc ccttgcgcgg
      961 cgccaccctc atcgcacgcc cgcctcgttc agcaggcgat ccaccatgcc ttcgcgccgg
     1021 atttcctcca gcaccgcgtc gagacgggac gtgagatcgg aggacgccgc ctcggacccg
     1081 ccggccttgt gtccgatcac caggaaatag tcccggggcg gccccaccgg cgccggcagc
     1141 acctcgaccc ggtcggcgat gcccatgtcg cggatcagca cccgcgccac cgccgcttcg
     1201 accaccgccg ttccaacccg gccggccacc agcttttcca ggttctgggc gtccttcatg
     1261 gcaccgtcgt cgaccgcgcc gacggccttg cgcaggatcg cggtgatgga atagccgcgc
     1321 ggggacgcca gcggctgggg cagcttgccg aggtcgtcgc cggtccaatc gcggccctgg
     1381 ccgcgccgga ccaccgccac gtaggacagc gattgcagcg gcgtccaggg atagcgtgcc
     1441 acctgggcgc gttcgtcgtt gtacgaggcc gagtagatgc cgtcatagct gcccttggcc
     1501 agctcgttcc agcagcgctc ccacgccacg ctgtcgatgg tggctttgag gccgacgcgg
     1561 cggaacgcct cgagcaccat gcgggtgtgg acgccgtcca ccaccgcgcc gctgccgacc
     1621 gtgtagggcg gccattcggt ggtgcacagg cgcaccgcct gggcctcggc caagcgaggc
     1681 gcaagtgcca gcagcgccac aaccacccac gctcgccgca tcggaccagt cccctcggtc
     1741 ggatagctcc gccgccatag taccaagcgg aggagcgacg acaacggggc gcatgagtct
     1801 cgcatacgaa tgaacttggc ggtagcaggg gctattgcgc gacaaactcc ttgatggcgt
     1861 cggccgcgtc gtcggcggcg aggtcgagga agaagtggtc ggcgttgggg atggtgacca
     1921 gtttcaccct gcccgcgtcg gccagcggct tgaccgcctc gggcaggccc ttgaccacct
     1981 cgtcctgggc ggcggcgacc accagggtcg gcaccttgat gcggggcagc gacgccatca
     2041 cacccaggcg cggctcgggc tggtagtagc cgacgaacga gccggcggcg accgtggcct
     2101 tggggcaata gatgaagtcg gtggcggcca tcatctcggc cggcttgccc gccttgacca
     2161 atgccgccgc cttggccagc ggcgccgcca ggggcgtgcc gtagcgggcc tggtactgcg
     2221 cctgctcggc cttctcctcc caggtggcgg gggccagcag cacgaccttg gacaccgagg
     2281 cgtcggcccg ctcggcggcg taccaggcgg tctgggcacc gccgcgcgaa tggcccatca
     2341 gcaccagccg cgacgccccc tgccccttca cccacccgac ccaggcgccg atctcgtcca
     2401 gcgcgtcggc gtggcggtgg cgatgaggaa cggcgcaatc atacatgccc tggcggttgt
     2461 cgaggcccag gctgagggtg atggccaggc tgctgagtcc acgctcggcc agcccggcct
     2521 gcatggcctt gatgatctcc atgccgttgt gggccagcgt gccgtgggtg atcagcacca
     2581 tcccgtcctt gacggtcttg gcgtcggcca gcgccagatt gccgttgagc gccagcccgc
     2641 catggcggat ctgcaccgcc tcggcccgag cctccgcccg ccagcccaac agcgccagcg
     2701 ccgcgaccgc gacgcagatc aggtttttca tgacgtctct ccctgccttg cccgctttgg
     2761 tgcaggcttt gacaaggatt gaacggcgag gacgggccgg gcgtcaacct ggacctaggg
     2821 acgccacgcc ccgaacggca ccaccttgtt gtcgatgtcg tggccgatgt cggcgcggcc
     2881 gagatagggg atggcggcgc gggcgcacca atagcgcgcc acctcttcct cgcccaggac
     2941 gaagtcgggg tcgttgggcg gcacgtcgcc gcaacggccc agcatgagac ccgccacatt
     3001 gcgcagcgcc gggttgctgg cgatctggcc gagggcgcgg tcgatgcggt acatggcctc
     3061 ggacacctct tccaccatca cgacgtggcc ggacaggtcg ggcagatagg gggtgccgac
     3121 cagatgcgcc aggatggtga ggttgaaggc cgccgtcggg cggtccgcca ccgaaggctc
     3181 cagcgccgcc gggtcgcggt cgatcaggaa ggccagggcg cgccgcaccg ccgcctcgcc
     3241 gccggtacgg ttgaggtcgg ccggcatggg gccgtgggcg acgcggccga tgccggcgcc
     3301 gtatagcgcg cccagcatgg cgccggcgtc
//
LOCUS       DATIKR010000474         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_43842, whole genome shotgun sequence.
ACCESSION   DATIKR010000474 DATIKR010000000
VERSION     DATIKR010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43842"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VLL76_07395"
     CDS             complement(<1..295)
                     /locus_tag="VLL76_07395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29365.1"
                     /translation="MRHLVTALILALAAIPAQAQQCRGPEGLPEPRVELPVVEGEFRR
                     LASKGLACIMPEEQGAAMYRTEAKISFLPCLKIGAVAVADDISDVEELLGPPFS"
     gene            complement(329..1570)
                     /locus_tag="VLL76_07400"
     CDS             complement(329..1570)
                     /locus_tag="VLL76_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HSV29366.1"
                     /translation="MTPRQVLRRMFEAAVAAASPDVCVPRHLPTRPRGRTIVVGAGKG
                     AAAMARAVEDHWSGELTGLVVTRYGHAVPCQRIEVVEAAHPVPDAAGHDAARRILAMV
                     QGLTADDLVLCLISGGGSALLTLPAPGITLEEKRAVTAALLKSGASIHEINAVRKHLS
                     AIKGGRLAAAAAPARVVTLAISDVPGDDASVIASGPAVPDPSTFADARAVLDKYAITP
                     PEAVRKVLDGGEETPKDLPNACVTLVATPQECLEAAASVAIAHGWLPLLLGDAIEGEA
                     REVARVMAGIALSVKRHQHPVPPPAVLISGGETTVTVRGHGRGGRNAEFLLGLAVALN
                     GEAGIHAIACDTDGIDGSEDNAGAVIAPDTLARAAARGLDAKAALADNDAYSLFAALD
                     DLIVTGPTLTNVNDFRAILIE"
     gene            complement(1567..>2148)
                     /locus_tag="VLL76_07405"
     CDS             complement(1567..>2148)
                     /locus_tag="VLL76_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSV29367.1"
                     /translation="RRIETKGCHYLDAPVSGGDVGARNASLTIMVGGPTAAFERVKPL
                     FEVMGKSITHIGEANGAGQTCKAANQIVVAMTIQAVAEALVFASKAGADPAKVRQALM
                     GGFAGSRIMEVHGPRMIERNFTPGFRVELHQKDLNVVLQSARSLGVSLPGTAAVQELF
                     NAVAAKDGGAKLDHSAIVTVLERLADHEIGHRE"
BASE COUNT          322 a          739 c          768 g          319 t
ORIGIN      
        1 cgctgaacgg cggccccagc agttcctcaa cgtccgagat gtcgtcggca accgcgacgg
       61 cgccgatctt caggcaggga aggaacgaga tcttggcctc ggtgcggtac atggccgcgc
      121 cctgctcttc cggcatgatg caggccagac ccttggacgc gaggcgacgg aactcgccct
      181 cgaccaccgg caattcgacg cgcggttcag gcagtccttc cggaccccgg cattgctggg
      241 cctgggcggg aatggcggca agggcgagga tcagggcggt gacaagatgg cgcatggcgg
      301 cggatgataa ccgtgacgcc gtttcctgtc attcgatgag aatggcccga aaatcgttga
      361 cgttggtcag cgtcgggccg gtgacgatca ggtcgtcgag tgccgcaaac agggaatagg
      421 cgtcgttgtc ggccaaagcg gccttggcat ccaatcctcg ggcagcggcg cgcgccaggg
      481 tgtcgggcgc gatcaccgcg ccggcattgt cctcggaccc gtcgatgccg tcggtgtcgc
      541 aggcgatggc atggatgccg gcctcgccgt tcagggcgac cgccagcccc agcaggaatt
      601 cggcgttgcg gccgccgcgc ccgtggccgc gaaccgttac cgtggtctcg ccgcccgaga
      661 tcagcacggc gggcggcggc accgggtgct ggtggcgctt gaccgacagg gcgatgccgg
      721 ccatgacgcg agcgacctcg cgggcctcgc cctcgatagc gtcgcccagc agcagcggta
      781 gccaaccatg ggcgatggcg accgaggcgg cggcctccag gcattcctgc ggcgtcgcca
      841 ccagggtgac acaggcattg ggcaggtcct tgggtgtctc ctcgccgccg tccaatacct
      901 tgcgcaccgc ctcgggcggc gtgatggcgt atttgtccag caccgcgcgg gcgtcggcga
      961 aggtcgaggg atcgggcacg gcaggacccg aggcgatgac cgacgcatcg tcgcccggca
     1021 cgtccgagat cgccagcgtc accacccgag ccggcgcggc ggcggctgcc aggcggccgc
     1081 ccttgatggc cgacaaatgc ttgcgcacgg cgttgatttc atggatcgac gcgcccgact
     1141 tcagcagcgc ggcggtcacc gcgcgctttt cctccagcgt gatgccgggc gcgggcagcg
     1201 tcagcagcgc cgaaccgccg cccgagatca ggcacagcac caggtcgtcg gcggtcagtc
     1261 cctggaccat ggcaaggatg cgccgcgccg cgtcgtggcc ggcggcatcg ggcaccggat
     1321 gggcggcctc gaccacctcg atgcgctggc atggcactgc gtggccatag cgggtgacaa
     1381 ccagcccggt cagttcgccc gaccaatgat cctcgacggc gcgggccatg gcggcggcgc
     1441 ccttgcccgc ccccaccacg atggtgcggc cccggggccg cgtcggcagg tgccggggca
     1501 cgcacacgtc cggcgaggcg gcggcaacgg ccgcctcgaa catgcgccgc agcacctggc
     1561 gcggagtcat tcgcgatgcc cgatctcgtg gtcggccagc cgctccagca cggtgacgat
     1621 ggccgaatgg tccagcttgg cgccgccgtc cttggcggcg acggcgttga acagctcctg
     1681 cacggcggcg gtaccgggca ggctgacgcc caggctgcgg gccgattgca gcaccacgtt
     1741 gaggtccttc tggtgcagct cgacgcggaa gccgggggtg aagttgcgct cgatcatgcg
     1801 cggtccgtgc acctccatga tgcgcgagcc ggcgaagccg cccatcagcg cctggcgcac
     1861 cttggccggg tcggcacccg ccttcgaggc gaacaccagc gcctcggcca ccgcctggat
     1921 ggtcatcgcc accacgatct ggttggccgc cttgcaggtc tggccagcgc cgttggcctc
     1981 gccgatatgg gtgatcgact tgcccatgac ctcgaacagc ggcttgaccc gttcgaaggc
     2041 ggcggtgggg cctcccacca tgatggtcag gctggcgttg cgggcgccaa cgtcgccgcc
     2101 cgagaccggc gcgtcaaggt aatggcagcc cttggtctcg atgcggcg
//
LOCUS       DATIKR010000475         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_80153, whole genome shotgun sequence.
ACCESSION   DATIKR010000475 DATIKR010000000
VERSION     DATIKR010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80153"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VLL76_07410"
     CDS             <1..210
                     /locus_tag="VLL76_07410"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSV29368.1"
                     /translation="ASLYLFTDGLTEAKWDKGHMLGAAGVEKLLARHAALPLPDRLEA
                     VLADVARDGLALKDDLTMMVVEARA"
     gene            207..617
                     /locus_tag="VLL76_07415"
     CDS             207..617
                     /locus_tag="VLL76_07415"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29369.1"
                     /translation="MTLVDEVFPARPDRLCDIRRAVAEAADGIGCSMEVIQDVVLAVD
                     EACQNIIRHAYQGGDGDIRVQVAHEAGALVVRLIDYAPPVDVAKICPRALEDVRPGGL
                     GTHFMRQVMDEVSFLPPPAGAGNLLQMIKRIGES"
     gene            614..940
                     /locus_tag="VLL76_07420"
     CDS             614..940
                     /locus_tag="VLL76_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSV29370.1"
                     /translation="MNLDTREVDGCVVVGLEGEVDLQHSPKVRKVLMELMFERRDVLI
                     DMERVAYIDSSGIASLVEAYQMARKNQSRFTLVAVSQPAMRVLQLARLDKVFAIAETV
                     ADALKA"
     gene            942..>1551
                     /locus_tag="VLL76_07425"
     CDS             942..>1551
                     /locus_tag="VLL76_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV29371.1"
                     /translation="MDRLIQFLDRLGRYVMRGIAEFGFGASLLAESVFWIFMGKSRRQ
                     PVRVAAIFAQAMEIGIAALPIITMLAATIGMMLAIQGIYTLKTFGAESRVTLGIALST
                     VREFSPLITGILVAGRSGSALAARLGTMRINQEIDSLTVMGISPVRFLVVPSLVAMAV
                     MLPLLTLWADLVALFAAGLYVSAELQTSLAAYGDEVVTLLKLN"
BASE COUNT          231 a          503 c          547 g          270 t
ORIGIN      
        1 gcttcgctct atctgttcac cgacggcctg accgaggcca agtgggacaa gggccacatg
       61 ctgggtgccg ccggcgtcga gaagctgctg gcccgccatg ccgcactgcc gctgcccgac
      121 cggttggagg cggtgctggc cgatgtcgcc cgcgacggcc tggcgctgaa ggacgacctc
      181 accatgatgg tggtggaggc ccgggcatga cgctggtgga cgaggtgttc cccgcccgcc
      241 ccgaccggct gtgcgacatc cgccgcgccg tggccgaagc cgccgacggc atcggctgtt
      301 ccatggaggt gatccaggac gtggtgctgg cggtggacga ggcctgccag aacatcatcc
      361 gccacgccta tcagggcggc gacggcgaca tccgggtgca ggtggcgcac gaggcggggg
      421 cgctggtcgt ccgcctgatc gattacgcgc cgccggtgga cgtcgccaag atctgcccgc
      481 gcgcgctcga ggacgtccgt cccggcgggc tggggacgca tttcatgcgg caggtgatgg
      541 acgaggtgtc cttcctgccg ccgccggccg gggccggcaa tctgttgcag atgatcaagc
      601 ggatcggtga atcatgaact tggatacccg cgaggtggat ggctgcgtgg tggtgggcct
      661 cgaaggcgag gtcgacctcc agcacagccc caaggtacgc aaggtgctga tggaactgat
      721 gttcgagcgg cgcgacgtgc tgatcgacat ggaacgcgtc gcctacatcg attcgtcggg
      781 catcgccagc ctggtcgagg cctaccagat ggcgcgcaag aaccagagcc gcttcaccct
      841 ggtcgcggtc agccagccgg ccatgcgggt gctgcaactg gcgcggctgg acaaggtgtt
      901 cgccatcgcc gagacggtcg ccgacgcgct gaaggcctga cgtggaccgc ctgatccagt
      961 tcctcgaccg cctgggccgc tatgtcatgc gcggcatcgc cgagttcggc ttcggcgcct
     1021 cgctgctggc ggaatcggtg ttctggatct tcatgggcaa gagccggcgc cagccggtgc
     1081 gggtggccgc catcttcgcc caggccatgg aaatcggcat cgcagccctg cccatcatca
     1141 ccatgctggc cgccaccatc ggcatgatgc tggcgatcca aggcatctac acgctgaaga
     1201 ccttcggcgc cgaaagccgc gtgacgctgg gcatcgcgct gtccaccgtg cgcgagttct
     1261 cgcccttgat caccggcatc ctggtggccg gccgctcggg tagcgccttg gcggcgaggc
     1321 tgggcaccat gcgcatcaac caggaaatcg attcgctgac ggtgatgggg atttccccgg
     1381 tgcgcttcct ggtggtgccg tcgctggtgg ccatggcggt gatgctgccg ctcttgaccc
     1441 tgtgggccga cctggtggcg ctgttcgccg ccggccttta cgtgtcggcc gaactgcaga
     1501 cctcgctggc cgcctatggc gacgaggtgg tcaccctgct gaagttgaac g
//
LOCUS       DATIKR010000476         4065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_18649, whole genome shotgun sequence.
ACCESSION   DATIKR010000476 DATIKR010000000
VERSION     DATIKR010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18649"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="VLL76_07430"
     CDS             <1..801
                     /locus_tag="VLL76_07430"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSV29372.1"
                     /translation="YIEHTEFPTGTRTMLLEGLMYSLRLHMLLLRPIRILVDRLFFRE
                     AGQMKKISLRLEQMVCDFTIPRPGSWLSTLVDLRREGKLTKDQVRGEITSMLVSSFSL
                     ASALSSMLLCLAARPQYRRKIHDDPAFARYFVMEVLRLYPPFRQFGYERSPGRGDKQP
                     NESHEFMVSVFKLHRNENVWKDPHKFYPERFQDPESTRGFKYMPFGMGKRMCSGRMFS
                     TMMLVEAAKYVCSDESPIVLLNNDKLPRGRSGRLVSFALDDTLTYRAR"
     gene            878..1282
                     /locus_tag="VLL76_07435"
     CDS             878..1282
                     /locus_tag="VLL76_07435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29373.1"
                     /translation="MWRWLSLGAIVGLGACSSAESIQLADHETCLDMGFEAWSLDYSY
                     CRLTLEQGRTGAARLVLLPPKGPRGTAAREQTLPRGLTKTPPEPTSVPAPALAPPPAL
                     APAPAQPPEPEQSEEPPPPAAAPRPQVRAGAI"
     gene            complement(1286..3166)
                     /locus_tag="VLL76_07440"
     CDS             complement(1286..3166)
                     /locus_tag="VLL76_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HSV29374.1"
                     /translation="MTTGYPKRNPMALMVAAIGVVFGDIGTSPLYAMKETFAGPHPLA
                     LDKLHVLGVLSLVFWAVTIVVSIKYVIVIMRADNKGEGGSLALLALVHRAAEDRPAVA
                     ALVSALGIFAAALFYGDSMITPAISVLSAVEGIQVVAPALERWVVPVTLAILAVLFLI
                     QRHGTDTVGKMFGPVMILWFGTLAVLGIKNIALAPYVLQALSPHWAVMFLWSDGWIGF
                     LALGSVVLAVTGAEALYADMGHFGRLPIRLAWYLFVLPALMLNYFGQGALLLTRPEAL
                     SNPFFGMAPGWAGIPLLALAGAATVIASQAVISGAFSVTRQAIQLGYLPRMTIIHTSE
                     KEIGQIYIPFLNWMLMIAVAALVLGFRSSSSLASAYGVAVTGTMVIDAVLIAMVMALL
                     WGWGRRRIAWMIGIFLAVDLSFFLSNSTKIPYGGWFPLAIGVAVFLLLTTWKRGRMLL
                     MARLSKDSMPVEDFTATLSDRVARVSGTAIFLTGTCEGIPLALLHNLKHNKVIHERVV
                     ILTVRIEEVPFVPDERKLEHIPLTDGMSRLILSFGFMEDPNIPKTLARAKLDQLGFFY
                     EPMAISYFLSRETIIPSSQPGMSMWREHLFAFMARSATSAMDFFHLPSNRVVELGSQV
                     EI"
     gene            3317..>4065
                     /locus_tag="VLL76_07445"
     CDS             3317..>4065
                     /locus_tag="VLL76_07445"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSV29375.1"
                     /translation="MRDITMAVFGVTGLLALVTLLVPVAARANVAFSIVLAMAGIALG
                     LAADAVGMLGLGGPLGDFLATVAQFDLSSEAFILIFLPALLFETAVVIDVRRLMDDLA
                     PILLLAVVAVLVSTFAVGFALGAVSDIGVVACLLLAAIVSTTDPIAVVAIFRDLGVPH
                     RLSLLVEGESLFNDAAAISLFALFLGMLTGERDADVLDGMLAFARGFVGGLVVGYAWG
                     RVVCWSITFLRGQRFAEITVTVATAYLVFLVG"
BASE COUNT          733 a         1336 c         1304 g          692 t
ORIGIN      
        1 tacatcgagc acaccgaatt cccgaccggc acccgaacca tgttgttgga ggggctgatg
       61 tattccctcc ggctgcacat gttgctgctg cgtccgatcc gcatccttgt cgaccggctg
      121 tttttccggg aagccggcca aatgaagaag atttcgcttc ggctcgagca gatggtgtgc
      181 gatttcacga tccccaggcc cggatcgtgg ctttcgaccc tggtggattt gcgaagagag
      241 gggaaactca ccaaggatca ggtcagggga gagatcacca gcatgctggt gtcgtccttc
      301 agccttgcgt cggcgctgag ctcgatgctc ttgtgcctgg cggcacggcc gcaatacaga
      361 cggaagattc acgacgatcc ggctttcgcc cgctacttcg tcatggaggt cttgcgccta
      421 tacccaccgt ttcgtcagtt cggctacgaa cggtcacccg ggagaggcga caagcaaccc
      481 aatgagtccc acgagttcat ggtctcggtc ttcaagttgc atcgcaacga aaacgtctgg
      541 aaggatccgc acaagttcta cccggaacgc ttccaggacc cggagtcgac cagggggttc
      601 aagtacatgc cgttcggcat gggcaagcgg atgtgttcgg gccgaatgtt ctcgaccatg
      661 atgctggtcg aggccgccaa gtatgtctgt tcggacgaat ccccgattgt cctcctgaac
      721 aacgacaagc tgccacgggg ccggagcggc cgcctggtgt ccttcgccct ggacgacacc
      781 ctcacctatc gcgccagata gcgagcggcc accggtcgga aggcaggatg gcgtcgccac
      841 caccgccgcc tcacttgtgg gcgaacggag gtgcggcatg tggcgatggc tttccctggg
      901 tgcgatagtc gggctcggcg catgctccag cgccgaaagc atccaactgg ccgaccatga
      961 gacctgcctc gacatggggt tcgaggcgtg gtcgctggat tacagctatt gccgcctgac
     1021 cttggagcag ggccgcaccg gcgcggcccg gctggtgctg ctgccgccaa agggaccccg
     1081 cggcaccgct gcccgggaac agaccttgcc gcgcgggctg accaagacgc cgcccgaacc
     1141 gacatcggta ccggcaccgg cattggcacc gccgccagca ttggcaccgg ccccggcaca
     1201 accgccggaa cccgaacaat ccgaggaacc gccaccgcct gccgccgcac cccggccgca
     1261 agttcgggcc ggggcaatct gaggatcaga tttcgacctg gctgcccagt tcgacgaccc
     1321 ggttggacgg caggtggaag aagtccatgg cgctggtggc ggagcgggcc atgaaggcga
     1381 acagatgctc gcgccacatg gacatgccgg gctggctgga cggaatgatg gtttcccgcg
     1441 acaggaaata cgaaatggcc ataggttcat agaagaaccc caattggtcc agcttggcgc
     1501 gagccagcgt cttggggatg ttggggtctt ccatgaagcc gaagctcagg atcagtcggc
     1561 tcatgccgtc ggtcagcgga atatgctcca gcttgcgctc gtccggcacg aacggcactt
     1621 cctcgatcct gacggtcagg atcaccaccc gctcgtggat caccttgttg tgcttgaggt
     1681 tgtgcagcag cgccagcggg atgccctcgc aggtgccggt caggaagatt gcggtaccgg
     1741 acacgcgggc gacgcggtcg gacaaggtcg ccgtgaaatc ctcgaccggc atggaatcct
     1801 tgctgagccg ggccatcagc agcatgcggc cgcgtttcca tgtggtcagc agcaggaaca
     1861 cggccacgcc gatggccagc gggaaccagc cgccatacgg gatcttggtg gaattggaca
     1921 ggaagaaact caggtccacc gccaggaaga tgccgatcat ccacgcgatg cggcgccgcc
     1981 cccaacccca cagcagcgcc atcaccatgg cgatcagcac cgcgtcgatg accatggtgc
     2041 cggtcaccgc cacgccatag gccgaggcca ggctgctgga agagcggaag cccagcacca
     2101 gcgccgccac cgcgatcatc agcatccagt tgaggaaggg gatatagatc tggccgatct
     2161 ctttttccga ggtgtggatg atggtcatgc gcggcaggta gccgagctgg atggcttggc
     2221 gcgtcaccga gaaggcgccc gagatcaccg cctgcgacgc gatcacggtg gcggcgcccg
     2281 ccaaggccag cagcggaatg ccggcccagc ccggagccat gccgaagaac gggttggaca
     2341 gggcttcggg gcgggtcagc agcagcgcgc cctggccgaa atagttcagc atcagcgccg
     2401 gcagcacgaa cagataccag gccaggcgga tcggcaggcg gccgaaatgc cccatatcgg
     2461 catacaacgc ctcggcgccg gtcaccgcca gcacgaccga acccagggcc aggaagccga
     2521 tccagccgtc gctccatagg aacatcacgg cccaatgcgg cgacagcgcc tgcagcacgt
     2581 aaggcgccag cgcgatattc ttgatgccca gcaccgccag ggtgccgaac cacaggatca
     2641 tcaccggccc gaacatcttg cccacggtgt cggtgccgtg gcgctggatc aggaatagga
     2701 ccgccaggat cgccagggtc acgggcacga cccagcgctc caaggcggga gccacgacct
     2761 gaataccctc gaccgccgac agcaccgaaa tggccggggt gatcatggaa tcgccgtaga
     2821 acagcgccgc cgcgaagata cccaacgcgc tcaccagcgc cgccaccgcc ggccggtcct
     2881 cggcagcgcg atggaccagc gccagcaggg ccaggctgcc gccttctccc ttgttgtcag
     2941 cgcgcatgat gacgatcacg tacttgatcg acaccacgat ggtcaccgcc cagaacacca
     3001 gcgaaagcac gcccagcacg tgcagcttgt ccagcgccag cgggtgcggc cctgcaaagg
     3061 tttccttcat ggcataaagc gggctggtgc cgatgtcgcc gaacaccacg ccgatggcgg
     3121 cgaccatcaa ggccatgggg ttgcgtttgg ggtaacctgt cgtcatggta cgtgtttcta
     3181 cctagtccaa ccgacgggat aaggcgcctt cgcggctgcg gagtcaatcc cgcgcgggcg
     3241 gcaacccact acccatatga cgacgctgcc gctaccatgg cgtcctttga ttgatcgaag
     3301 ggcggacgat ctcatcatgc gcgacatcac gatggccgtg ttcggggtca ccggcctgtt
     3361 ggccctggtc accctgctgg tcccggtcgc cgcccgcgcc aacgtcgcct tttcgatcgt
     3421 gctggcaatg gccggcatcg cgctgggcct tgccgccgac gccgtcggca tgctgggcct
     3481 gggcgggccg ctgggcgatt tcctggccac cgtggcgcag ttcgatttgt cgtcggaagc
     3541 cttcattctg atcttcctgc cggcgctgct gttcgagacc gccgtggtca tcgacgtgcg
     3601 ccgcctgatg gacgacctgg cgcccatcct gctgctggcc gtggtggcgg tgctggtctc
     3661 gaccttcgcg gtcggcttcg ccttgggcgc cgtcagcgac atcggcgtgg tcgcctgcct
     3721 gctgctggcc gccatcgtgt ccaccaccga ccccatcgcg gtggtggcga tcttccgcga
     3781 cctcggcgtg ccgcaccgcc tgagcctgct ggtcgagggc gaaagcctgt tcaacgacgc
     3841 cgccgcgatc tcgctgttcg ccctgttcct gggcatgctg accggcgagc gcgatgccga
     3901 cgtgctggac ggcatgctgg ccttcgcgcg cggcttcgtc ggcgggctgg tggtcggcta
     3961 tgcctggggc cgggtcgtgt gctggagcat caccttcctg cgcggccagc gtttcgccga
     4021 gatcaccgtg accgtcgcca ccgcctatct ggtcttcctg gtggg
//
LOCUS       DATIKR010000477         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_91900, whole genome shotgun sequence.
ACCESSION   DATIKR010000477 DATIKR010000000
VERSION     DATIKR010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91900"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VLL76_07450"
     CDS             complement(<1..760)
                     /locus_tag="VLL76_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAS-barrel domain-containing protein"
                     /protein_id="HSV29376.1"
                     /translation="MEIRAAEISAILKQQIANFGTEAEVAEVGQVLSVGDGIARVHGL
                     DKVQAGEMVEFPGGIKGMALNLETDNVGIVIFGDDRNIKEGDVVKRTGAIVDVPVGKG
                     LLGRVVDALGNPIDGKGPIEATERRRVDVKAPGIIPRKSVHEPMQTGIKAVDALIPVG
                     RGQRELVIGDRQTGKTAILIDTIINQKRWHDGDDEKAKLFCIYVAVGQKRSTVAQIVK
                     TLEDYGAMQYSIVVAATASEPAPLQFIAPYAGCAM"
     gene            complement(760..1314)
                     /locus_tag="VLL76_07455"
     CDS             complement(760..1314)
                     /locus_tag="VLL76_07455"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HSV29377.1"
                     /translation="MPSETIGVIATRYATALFELAESQGALDQVAGDLKALKAMIRES
                     ADLGRLLQSPVLSRADQGKAIAAVAKEAKFTTLTANFLGLVAKNRRLFVLEGIIDAYL
                     GRLAARRGEIAALVASAVPLSKAQLDSLTDTLKKAFGGDVAVNTSVDPSLLGGLVVKV
                     GSRMVDSSLKTKLQHLKLAMKGVG"
     gene            complement(1651..>3377)
                     /locus_tag="VLL76_07460"
     CDS             complement(1651..>3377)
                     /locus_tag="VLL76_07460"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HSV29378.1"
                     /translation="LAREAGVGPAVVKGLMEAGALERLHLPKPPTFAIPDFARPGPQL
                     SDGQRAAADALVEALGAFSVAVIDGVTGSGKTEVYFEAVAAALARGQQVLVLLPEIAL
                     SSQWLTRFKRRFGVEPAQWHSELADGKRRDTWRAVAAGEAKVVVGARSALFLPYADLG
                     LIVVDEEHDGAFKQEDGVSYHARDMAVVRGRIGGCPVVLASATPSLETLANVQAGRYR
                     RLHLPDRHAGAVLPDITLVDLRRTPPERGHWLAPPLVEALAETFAAGEQAMLFLNRRG
                     YAPLTLCRKCGHRLQCPHCTAWLVDHRRHGKLVCHHCGYFIRPPEKCPECEAEDSFAA
                     CGPGVERIAEEAMARFPQARVSVMASDTMTGPHAAAEFVRQVADHEIDLLIGTQIVAK
                     GYHFPMLTLVGVVDADLGLEGGDLRAAERTHQLLSQVAGRAGRAERPGRVMLQTFDPG
                     HPVMRALISGDRDSFIASEAEARRAINMPPYGRLAALVVSGPDAAALDDFTRRLARAA
                     PRVDGFDVLGPAPAPMALLRGRHRRRFLIKAARTINLQAMLRDWLAKNSPPHGVRVQV
                     DVDPYSFF"
BASE COUNT          535 a         1130 c         1180 g          532 t
ORIGIN      
        1 ccatggcgca gccggcgtag ggggcgatga actgcagcgg agcgggctcg gacgcggtgg
       61 cggccaccac gatcgagtac tgcatggcgc cgtagtcttc cagggtcttg acgatctggg
      121 cgacggtcga acgcttctgg ccgacggcga cgtagatgca gaacagcttg gccttctcgt
      181 cgtcgccatc atgccagcgc ttctggttga tgatggtgtc gatcaggatg gcggtcttgc
      241 cggtctggcg gtcgccgatg accaactcgc gctggccgcg gccgacgggg atcagggcgt
      301 cgacggcctt gatgccggtc tgcatcggct cgtgcaccga cttacgcgga atgatgccgg
      361 gggccttgac gtcgacgcgg cgacgctcgg tcgcctcgat cgggcccttg ccgtcgatcg
      421 ggttgcccag cgcgtcgacg acgcggccca gcaggccctt gccgacgggg acgtccacga
      481 tggcgccggt gcgcttgacg acgtcgcctt ccttgatgtt gcggtcgtcg ccgaagatca
      541 cgatgccgac gttgtcggtc tcgaggttca gcgccatacc cttgatgccg ccggggaatt
      601 cgaccatctc accggcctgg accttgtcaa ggccatggac acgggcgata ccgtcaccga
      661 cagaaagcac ctggcccacc tcggcgactt ccgcctcggt accgaagttg gcgatctgtt
      721 gcttgaggat cgcggagatc tcagccgcgc ggatttccat tatccaaccc ctttcatagc
      781 gagcttaagg tgctgcagct tcgtcttcag cgagctgtca accatacggg agccaacctt
      841 cacgaccagg ccgcccagca agctgggatc gaccgaggtg ttgacggcga cgtcgccgcc
      901 gaacgccttc ttgagcgtgt cggtcaagga atcgagctgg gccttgctca gcgggaccgc
      961 cgaggcaacc agcgcggcga tctcgccgcg gcgggcggcg agccggccca gatacgcgtc
     1021 gatgatgcct tcgagcacga agagccggcg gttcttggca accagcccca ggaagttcgc
     1081 ggtcagcgtg gtgaacttcg cttccttcgc gacggccgca atggccttgc cctgatcggc
     1141 gcgcgagagg acggggcttt gcaggagccg gcccagatcc gcgctttcgc ggatcatggc
     1201 cttgagggct ttcaagtcac cggcgacctg gtcgagggca ccctggcttt cggccagctc
     1261 gaagagcgcg gtggcgtagc gggtggcgat gacgccaatt gtttcggatg gcaagggcaa
     1321 gtcctcgggc taggtcgaaa cgaattcgcc ggtggcctaa gttattgtta tacaaacgat
     1381 ttatcgtgcc ttgagcgagt ttccccctca aagcgcgccg gttaactagc acatcgggtt
     1441 ttgcgttgca agacgactcc tcccctttcg gggggagctg aatgcagatt ctttacgcca
     1501 atggcctgga actccgcgcc tttccgagag ggtgggcaac ctacccatcc aacagggcgg
     1561 gagcggccgg gcagggcggc aaaccgccaa atccgtgaga ttgcaacatc tttcggctgg
     1621 caccccgcca ggcccaccct acccatcgga tcagaagaag ctgtagggat cgacgtccac
     1681 ctgcacgcgc acgccgtggg gcggcgagtt tttcgccaac cagtcgcgca gcatcgcctg
     1741 caggttgatg gtgcgtgccg ccttgatcag gaaccggcgg cgatggcggc cgcgcaacag
     1801 cgccatcggc gcaggcgccg ggccgagcac gtcgaagccg tccacccggg gggcggcgcg
     1861 ggcgaggcgg cgggtgaaat cgtccagcgc cgccgcgtcc ggtcccgaca ccaccaacgc
     1921 cgccagccgg ccatagggcg gcatgttgat ggcgcgcctc gcctcggcct cgctggcgat
     1981 gaagctgtcg cggtcgcccg agatcagcgc ccgcatcacc gggtggccgg ggtcgaaggt
     2041 ctgcagcatg acgcggccgg ggcgctcggc gcggccggcg cggccggcca cctgcgacag
     2101 caattggtgg gtgcgctcgg cggcacgcag gtcgccgccc tccaagccca gatcggcgtc
     2161 caccacgccg accagcgtca gcatggggaa gtgatagccc ttggcgacga tctgggtgcc
     2221 gatcagcagg tcgatctcgt ggtcggccac ctggcgcacg aactcggccg ccgcgtgcgg
     2281 gccggtcatg gtgtcggacg ccatcaccga cacgcgcgcc tgggggaagc gcgccatggc
     2341 ctcctcggcg atgcgctcga cgccggggcc gcaggcggcg aagctgtcct cggcctcgca
     2401 ttccgggcat ttctcgggcg gccggatgaa atagccgcaa tggtggcaga ccagcttgcc
     2461 gtggcggcga tggtccacca gccaggcggt gcaatggggg cattgcaggc ggtggccgca
     2521 tttgcggcac agcgtcagcg gggcatagcc gcgccggttc aggaacagca tggcctgttc
     2581 gccggcggcg aaggtctcgg ccagcgcctc gaccagcggc ggcgccagcc aatggccgcg
     2641 ctcgggcggg gtgcggcgca ggtccaccag ggtgatgtcg ggcagcaccg cgccggcatg
     2701 gcggtcgggc aggtgcaggc ggcggtagcg gccggcctgg acgttggcca gggtttccag
     2761 cgacggcgtc gccgaggcca gcaccaccgg gcagccgccg atgcggcccc gcaccaccgc
     2821 catgtcgcgg gcgtggtagg aaacgccgtc ttcctgcttg aaggcgccgt cgtgctcctc
     2881 gtccaccacg atcaggccaa ggtcggcata gggcaggaac agggcggagc gggcgcccac
     2941 caccaccttg gcctcgcctg cggccaccgc ccgccaagtg tcgcgccgct tgccgtcggc
     3001 cagttcggaa tgccattgcg ccggttcgac cccgaagcgg cgcttgaagc gggtcagcca
     3061 ttgcgacgac agcgcgatct cgggcagcag caccagcacc tgctggccgc gtgccaaggc
     3121 ggcggcgacc gcctcgaaat acacctcggt cttgcccgag ccggtgacgc cgtcgatcac
     3181 cgccaccgag aacgcgccca gcgcctcgac cagggcatcg gccgccgcgc gctggccgtc
     3241 cgacaattgc gggccggggc gggcgaaatc gggaatggcg aaggtgggcg gcttgggcag
     3301 gtgcaggcgt tccagcgcgc cggcctccat cagccccttg accaccgccg ggcccacgcc
     3361 cgcctcgcgc gccagat
//
LOCUS       DATIKR010000478         2114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_43869, whole genome shotgun sequence.
ACCESSION   DATIKR010000478 DATIKR010000000
VERSION     DATIKR010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43869"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VLL76_07465"
     CDS             <1..384
                     /locus_tag="VLL76_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HSV29379.1"
                     /translation="DDMVLDQPEPAPSFSMDDFPADDFEEPEPPPPPPPPPRRKVTVV
                     EEDDDLVSRPVADRSTSLLTDLAREIVRQRAIGIGNGGVTLEDMVRELLKPILKEWLD
                     ENLPYMIERIVKKEIEKMVNRAENL"
     gene            483..>2114
                     /locus_tag="VLL76_07470"
     CDS             483..>2114
                     /locus_tag="VLL76_07470"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HSV29380.1"
                     /translation="MLEKTYRPNEVEPKHYERWENSGAFAARPETNKAPYTIMMPPPN
                     VTGSLHMGHALTFTLQDVLVRYHRMAGRDALWQPGTDHAGIATQMVVERQLEAKGVTR
                     HDLGRDKFIERVWEWKGESGGTITRQLRRLGASPDWARERFTMDDGLSHAVRTVFVTL
                     HKQGLIYRDKRLVNWDPKLHTAISDLEVEQREVKGHMWHFRYPVEGMADTFITVATTR
                     PETMLGDTAVAVHPEDERYQGLVGKMVRLPIVDRLIPIVADEYSDPTKGTGAVKITPA
                     HDFNDFQVGQRHSLPMINILDRDAKITGDVPADYVGLDRYDARKKVVATFEELGLLDK
                     IEPHTHMVPYGDRSGVVIEPWLTDQWFVDAATLAKPAIEAVESGRTRFVPKHWENTYY
                     EWMRNIQPWCISRQIWWGHQVPAWYGPDGRVFVEMSEEEATIAAQAHYGKAVELTRDS
                     DVLDTWFSSALWPFSTLGWPEKTPDLDRYYPTDVLVTGFDIIFFWVARMMMMGIHFMK
                     EVPFRDVVIHGLVRDAQGHKMSKSEGNVLDPVDLID"
BASE COUNT          398 a          730 c          666 g          320 t
ORIGIN      
        1 gacgacatgg tgttggacca gcccgagccg gcgccgtcgt tcagcatgga cgacttcccc
       61 gccgacgatt tcgaggagcc cgagcctccg ccgcctccgc cgccaccgcc gcgccgcaag
      121 gtgaccgtgg tcgaggaaga cgacgacctg gtgtcgcgcc cggtcgccga ccgcagcacc
      181 tcgctgctga ccgatctggc gcgcgagatc gtgcgccagc gcgccatcgg catcggcaac
      241 ggcggcgtga ccctggaaga catggtgcgc gagctgttga agccgatcct gaaggaatgg
      301 ttggacgaga acctgcccta catgatcgag cgcatcgtca agaaggaaat cgagaagatg
      361 gtaaaccgcg ccgagaatct ctaatctccc gcggaccgag gttgtgacgg cccgggcctc
      421 cccgggccgt cttcattttc agacatccga acgcccaaaa gagcatcagg aagcacctgg
      481 ccatgctgga aaagacgtat cgccccaacg aggtcgagcc caagcactac gagcgctggg
      541 aaaactcggg cgccttcgcg gcccgccccg agacgaacaa ggcgccctac accatcatga
      601 tgccgccgcc caacgtgacg ggcagcctgc acatggggca cgcgctgacc ttcaccctgc
      661 aggacgtgct ggtgcgctat caccgcatgg ccgggcgcga cgcgctgtgg cagccgggca
      721 ccgaccatgc cggcatcgcc acccagatgg tggtcgagcg ccaactcgag gccaagggcg
      781 tcacccgcca cgacctcggc cgcgacaagt tcatcgagcg cgtgtgggag tggaagggcg
      841 aatcgggcgg caccatcacc cgccagttgc gccgcctggg cgcctcgccc gactgggcgc
      901 gcgaacgctt caccatggac gatggcctca gccacgccgt ccgcaccgtg ttcgtgaccc
      961 tgcacaagca gggcctgatc taccgcgaca agcgcctggt caactgggac cccaagctgc
     1021 acaccgcgat ttccgacctg gaggtcgagc agcgcgaggt caagggccac atgtggcact
     1081 tccgctatcc ggtcgaaggg atggcggaca ctttcatcac cgtggcgacc acccgtcccg
     1141 agaccatgct gggtgacacc gccgtcgccg tccatcccga ggacgagcgc taccagggtt
     1201 tggtcggcaa gatggtgcgc ctgcccatcg tcgaccgcct gatccccatc gtggcggacg
     1261 aatattccga cccgaccaag ggcaccggcg cggtgaagat caccccggcc cacgatttca
     1321 acgacttcca ggtcggtcag cggcacagcc tgccgatgat caacatcctg gaccgcgacg
     1381 ccaagatcac cggcgacgtg cccgccgact atgtcggcct cgaccgctac gacgcccgca
     1441 agaaggtggt cgccaccttc gaggagctcg gcctgctcga caagatcgag ccgcacacgc
     1501 acatggtgcc ctatggcgac cgctcgggtg tggtgattga gccgtggctg accgaccagt
     1561 ggttcgtcga tgccgccacg ctggccaagc ccgccatcga ggcggtggaa tcgggccgca
     1621 cccggttcgt gcccaagcat tgggagaaca cctactacga gtggatgcgc aacatccagc
     1681 cgtggtgcat ctcgcgccag atctggtggg gccatcaggt gccggcgtgg tacggacccg
     1741 acggccgcgt cttcgtcgag atgagcgagg aggaagccac catcgccgcc caggcccatt
     1801 acggcaaggc ggtcgagctg acccgcgatt ccgacgtgct cgacacctgg ttctcgtcgg
     1861 cgctgtggcc gttctcgacc ctgggctggc ccgagaagac ccccgacctc gaccgctatt
     1921 accccaccga cgtgctggtg accggcttcg acatcatctt cttctgggtc gcccggatga
     1981 tgatgatggg catccacttc atgaaggagg tgccgttccg cgacgtcgtc atccacggcc
     2041 tggtgcgcga cgcgcagggc cacaagatga gcaagtccga gggcaacgtg ctcgatccgg
     2101 tggacctcat cgac
//
LOCUS       DATIKR010000479         2952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_7040, whole genome shotgun sequence.
ACCESSION   DATIKR010000479 DATIKR010000000
VERSION     DATIKR010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7040"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..865)
                     /locus_tag="VLL76_07475"
     CDS             complement(<1..865)
                     /locus_tag="VLL76_07475"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015773966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HSV29381.1"
                     /translation="MIYPVILSGGVGSRLWPLSRSLSPKQFLPLAGERTMIQETARRV
                     QGERFHAPIVICNHEHRFQVAEQMRQVGCDPTAIVLEPMGRNTAPAAAIGALLAGKDD
                     PDAVVVLLPSDHLILAQDVFVDAVDKAVAAARAGALVTFGIKASAPETGYGYILKGEE
                     LPGCDGCRKVARFVEKPDRATAEGYVASGQYCWNSGMFVFAAGAFLAELEKFEPAMLA
                     ACRAALAEGKRDLDFLRLDEAAFAGCPSKSIDYAVMERTDRAAVVPADMRWSDVGSWG
                     SLWDIADKDEAG"
     gene            complement(937..1881)
                     /locus_tag="VLL76_07480"
     CDS             complement(937..1881)
                     /locus_tag="VLL76_07480"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSV29382.1"
                     /translation="MRILFITSNRIGDAVLSTGLLAHLAETHPQARFTVACGAVAAPL
                     FQPAPFVERVIPMVKQKRAGHWVKLWRATAGTWWHRVVDLRGSAMAWLVPTLHRHVLR
                     SSWEEKHRLYHVASAIGAAEPLAPVLWNTPEQQAHAAALIGDGPVLAIGPTAHWPGKQ
                     WPADRFAQVADALTGPGGRLAGARVAVFGAPNERAAAQPLLDAIPAERRIDLIGAIDL
                     ATVHACIRRCALYVGNDSGLMHIAAASGTPTLGLFGPSSEVFYGPWGAHCAAVRGPRS
                     FEDIVHTPAFDHTSDECLMLDLTVERVVAAADALLRLP"
     gene            complement(1884..>2952)
                     /locus_tag="VLL76_07485"
     CDS             complement(1884..>2952)
                     /locus_tag="VLL76_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSV29383.1"
                     /translation="AKDIEGHDVYIVTVPTPVDLENRPDLTPVLKACATVGKAMRKGA
                     VVVFESTVYPGVTEDICGPELEKHSGLTCGTDFFLGYSPERINPGDREHTVDRITKVI
                     AGQNPDVTALLARVYGSVTSGGVFVAASIRVAEAAKVIENAQRDINIAFVNEITMIFQ
                     RLGISIYDVLDASATKWNFLNFKPGLVGGHCIGVDPFYLATCALNNGHNPEIILSGRR
                     INDGMGPWIAGRIAEQLPAKARILLLGLTFKENVPDLRNSKVVDVIRALRQRGHQVDV
                     HDPYADPAEAEHEYGETLMPSLDGAAGYDCIVGAVPHAPYAAFSPESFEQLAKPGALV
                     ADIKGMWRNAEIPAGMRLWRL"
BASE COUNT          461 a          981 c         1061 g          449 t
ORIGIN      
        1 tgccggcctc gtccttgtcg gcgatgtccc acagcgagcc ccacgagccg acgtcgctcc
       61 agcgcatgtc ggcgggcacc acggcggcgc ggtcggtgcg ctccatcacc gcataatcga
      121 tggatttcga cgggcagccg gcgaaggcgg cctcgtccag gcgcaggaaa tcgaggtcgc
      181 gcttgccctc ggccagggcg gcgcggcagg cggccagcat ggcgggctcg aatttttcca
      241 gttcggccag gaaggccccg gcggcgaaca cgaacatgcc gctgttccag caatattgcc
      301 ccgacgcgac gtagccctcg gcggtggcgc gatcgggctt ttcgacgaag cgggcgacct
      361 tgcggcaacc gtcgcagccg ggcaattcct cgcccttgag gatgtagccg tagccggtct
      421 cgggcgccga cgccttgatc ccgaaggtga ccagcgcccc cgcgcgcgcc gccgccaccg
      481 ccttgtccac ggcgtccacg aagacgtcct gggccaggat cagatggtcg gacggcagca
      541 gcacgaccac cgcgtcggga tcgtccttgc ccgccagcag ggcaccgatg gcggcggccg
      601 gcgcggtgtt gcgccccatg ggctccagta cgatggcggt cgggtcgcag cccacctggc
      661 gcatctgctc ggccacctgg aagcggtgct cgtggttgca gatgacgatg ggggcgtgga
      721 agcgctcgcc ctggacgcgc cgcgccgtct cctggatcat ggtgcgctcg ccggccagcg
      781 gcaggaattg cttgggcgac agcgaacgcg acagcggcca caggcgcgag cccaccccgc
      841 ctgacaggat caccggataa atcatcgccg ctgcttccca atccccggat ttcgttgcgg
      901 tttgtctacc ataccacccg gcgggcgacc acttattcaa ggcaagcgca acaacgcatc
      961 ggcggccgcc accacgcgct cgaccgtcag gtccagcatc aggcattcgt cgctggtgtg
     1021 gtcgaaggcg ggggtgtgga cgatgtcctc gaagctgcga gggccgcgta cggcggcgca
     1081 atgggcgccc cacgggccgt agaacacctc ggacgacggc ccgaacaaac ccagcgtcgg
     1141 cgtgcccgag gcggcggcga tgtgcatcag gccggaatcg ttgccgacgt aaagggcgca
     1201 gcggcggatg caggcgtgca cggtcgccag gtcgatggcg ccgatcaggt cgatgcggcg
     1261 ctcggccggg atggcatcca acagcggctg ggcggcggcg cgttcgttgg gggcgccgaa
     1321 caccgccacg cgggcgccgg ccaaccggcc gccggggccg gtcagcgcat cggccacctg
     1381 ggcgaagcgg tcggccggcc attgcttgcc cggccaatgg gcggtggggc cgatcgccag
     1441 gacggggccg tcgccgatca gggcggcggc atgagcctgc tgctcggggg tgttccacag
     1501 caccggcgcc aacggctcgg ccgcgccgat ggccgaggcg acatggtaga ggcggtgctt
     1561 ttcctcccac gacgaccgca gcacgtggcg gtgaagcgtc ggcacaagcc aggccatggc
     1621 cgagccgcgc aggtccacca cccggtgcca ccatgttccg gccgtcgccc gccacagctt
     1681 gacccaatgg ccggcgcgct tctgcttgac catgggaatg acgcgttcga cgaacggcgc
     1741 cggctggaac agcggcgccg cgaccgcgcc gcaggccacc gtgaagcggg cctgggggtg
     1801 ggtttcggca aggtgggcaa gcaggccggt ggacaggacg gcgtcgccga tccggttcga
     1861 ggtgatgaaa aggatccgca agcctatagc cgccacagcc gcatgccggc cgggatctcg
     1921 gcgttgcgcc acatgccctt gatgtcggcg accagggcgc ccggcttggc caattgctcg
     1981 aagctttccg gcgagaaggc ggcataaggc gcatgcggca ccgcgccgac gatgcagtca
     2041 tagccggcgg caccgtccag cgacggcatc agcgtctcgc cgtattcgtg ctcggcctct
     2101 gccgggtcgg catagggatc gtgcacgtcc acctggtggc cgcgctggcg cagggcacga
     2161 atgacgtcca ccaccttgga attgcgcagg tcgggcacgt tttccttgaa ggtcaggccc
     2221 agcagcagga tgcgcgcctt cgccggcaat tgctcggcga tgcggccggc gatccacggg
     2281 cccatgccgt cgttgatgcg gcggcccgac aggatgatct cgggattgtg gccgttgttc
     2341 agcgcgcagg tcgccagata gaacggatcg acgccgatgc agtggccgcc caccaggccc
     2401 ggcttgaagt tgaggaagtt ccacttggtc gccgaggcgt cgagcacgtc gtagatcgag
     2461 atgcccaggc gctggaagat catggtgatc tcgttgacga aggcgatgtt gatgtcgcgc
     2521 tgggcgttct cgatcacctt ggcggcctcg gccacccgga tgctggcggc gacgaacacg
     2581 ccgcccgagg tgacgctgcc gtagacccgc gccagcaggg cggtgacgtc cgggttctgg
     2641 ccggcgatca ccttggtgat gcggtccacc gtgtgctcgc ggtcgcccgg attgatgcgc
     2701 tcggggctgt agcccaggaa gaagtcggtg ccgcaggtga ggcccgaatg cttctccagc
     2761 tcggggccgc aaatgtcctc ggtgacgccg ggatagacgg tgctttcgaa caccaccacg
     2821 gcgcccttcc gcatggcctt gccgacggtg gcgcaggcct tgagcacggg ggtcaggtcg
     2881 gggcggttct ccaggtcgac gggggtcggc acggtgacga tgtagacgtc gtggccctcg
     2941 atgtccttgg ct
//
LOCUS       DATIKR010000480         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_188238, whole genome shotgun sequence.
ACCESSION   DATIKR010000480 DATIKR010000000
VERSION     DATIKR010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188238"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VLL76_07490"
     CDS             <1..767
                     /locus_tag="VLL76_07490"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV29384.1"
                     /translation="TFATADVSIATNESFRQIAITRGGMDPDKVFVVRSGPDVRRLRI
                     EEPDPLLRCGARHLIAYVGVMNNQDGVEYVLEAMRDIIVCRGRTDVRAVLMGDGPMLE
                     QLKAMADTLGVAGHVTFTGWADDDVLIPMLNSADVCVSPDPVNEFNDKCTMNKILEYM
                     ALAKPVVLFDLTEGRRSAGEAGLYAQDNDARDLADKIVSLIDDPELCRRMGEAGRARM
                     ERELSWEYQVPRLLSAYEALGLEDASPRRRRFAGKL"
     gene            780..1685
                     /locus_tag="VLL76_07495"
     CDS             780..1685
                     /locus_tag="VLL76_07495"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV29385.1"
                     /translation="MQLPVVDVVIPHLNDRERLAECLSHLERQTYPADCFRVLVVDNG
                     SQQPIDDVTARFPMASCATEAEKGCGPARNKGVSLTNGDILAFTDSDCRPEPDWLLNA
                     VNRLTHQPIDIVAGDIKVFAADEERPTDVELFDKVFGFEARRYAERKHFATGANIVVP
                     RRVFEQVGPFRNGSLPEDLEWGRRAHAIGFRIGFAPDVVVRHPARRTWAELKRKTERT
                     SWHARNYMGEQRFFRLRWAAYTLGMASPPLWKVVQILTSSELNGTGQRMRTIATLLRI
                     RSYRVAIMAGYLFEPVPVRAESEAS"
     gene            1682..>2152
                     /locus_tag="VLL76_07500"
     CDS             1682..>2152
                     /locus_tag="VLL76_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29386.1"
                     /translation="MRRQARLGVVARLMSDRVRALSLAEQGLISAANFIALLMLARHF
                     EAADFGTFSFGWLTLQFVVNIQRSAVVVPFVIHAAEPGALEAEGPAWRVLNWLTTALM
                     TVALAAIALALPLFDAPEWMPAAFLIAAGFTGPAFVYEFKRRWLIQMDRYGAAVG"
BASE COUNT          328 a          763 c          708 g          353 t
ORIGIN      
        1 tgaccttcgc caccgccgac gtctccatcg ccaccaacga aagcttccgc cagatcgcca
       61 tcacgcgcgg cggcatggac ccggacaagg tgttcgtggt gcgctcgggt cccgacgtgc
      121 gccgcctgcg catcgaggag cccgacccgc tgctgaggtg cggggcgcgc cacctgatcg
      181 cctatgtcgg cgtgatgaac aaccaggacg gcgtcgaata cgtgctggaa gccatgcgcg
      241 acatcatcgt ctgccgcggc cgcaccgatg tgcgcgccgt gctgatgggc gatggcccca
      301 tgctcgagca gctcaaggcc atggcagaca ccctgggggt ggccggccac gtcaccttca
      361 ccggctgggc cgacgacgac gtgctgatcc ccatgctcaa ttccgccgac gtgtgcgtgt
      421 cgcccgaccc ggtcaacgag ttcaacgaca agtgcaccat gaacaagatc ctggaataca
      481 tggcgctggc caagccggtg gtgctgttcg acctcaccga aggccgccgc tcggccggcg
      541 aggccgggct ttacgcgcag gacaacgatg cccgcgacct ggccgacaag atcgtttccc
      601 tgatcgacga ccccgagctg tgccgccgca tgggcgaagc cgggcgcgcc cgcatggaac
      661 gcgaattgtc gtgggaatac caggttccgc gtctgctctc ggcctatgaa gccttgggac
      721 tggaagacgc cagcccgcgc cggcgccggt ttgcgggcaa gctgtaaggg aggaatggca
      781 tgcagcttcc cgtggtcgac gtcgtgatcc cgcatctgaa cgaccgcgaa cgccttgccg
      841 agtgcctgag ccacctggaa cgccagacct atcccgccga ctgcttccgc gtgctggtgg
      901 tggacaacgg gtcgcagcag cccatcgacg acgtgaccgc ccggttcccg atggcgtcct
      961 gcgccaccga ggccgagaag ggctgtggcc ccgcccgcaa caagggggtg tcgctgacca
     1021 acggcgacat cctggccttc accgattccg actgccggcc ggaacccgac tggctgctca
     1081 acgccgtcaa ccggctgacg caccaaccga tcgacatcgt cgccggcgac atcaaggtgt
     1141 tcgccgccga cgaggagcgg cccaccgacg tcgagctgtt cgacaaggtg ttcggcttcg
     1201 aggcccgccg ctatgccgaa cgcaagcatt tcgccaccgg cgccaacatc gtggtgcccc
     1261 ggcgggtgtt cgagcaggtc gggccgttcc gcaatggctc cctgcccgag gacctggaat
     1321 gggggcggcg cgcccatgcc atcggctttc gcatcggctt cgcccccgac gtggtggtgc
     1381 gccacccggc gcgccgcacc tgggccgagt tgaagcgcaa gaccgagcgc acctcgtggc
     1441 acgcccgcaa ctacatgggc gagcagcgct tcttccgcct gcgctgggcg gcctacaccc
     1501 ttggcatggc gtcgccgccg ctgtggaagg tggtccagat cctgacgtcg tccgaactca
     1561 acggcaccgg ccagcgcatg cgcaccatcg ccacgctgct gcgcattcgc tcgtaccggg
     1621 tggcgatcat ggcgggctat ctgttcgagc ccgtgccggt gcgggcggaa agcgaggcct
     1681 catgaggcgc caggcccggc tgggcgtcgt cgcccggctg atgtccgacc gggtgcgggc
     1741 gctgtccctg gccgagcagg gcctgatctc ggccgccaac ttcatcgccc tgttgatgct
     1801 ggcccgccat ttcgaggcgg ccgatttcgg caccttctcg ttcggctggc tgacgctgca
     1861 attcgtcgtc aacatccagc gctcggccgt ggtggttccc ttcgtcatcc atgccgccga
     1921 gcccggcgcg ctggaggccg aggggccggc ctggcgcgtg ctcaactggc tgaccaccgc
     1981 gctgatgacc gtggccttgg ccgccatcgc gctggcgctg ccgctgttcg acgcccccga
     2041 gtggatgccg gcggccttcc tgatcgccgc cggcttcacc ggtcccgcct tcgtctatga
     2101 attcaagcgg cgctggctga tccagatgga tcgctacggc gccgccgtgg gc
//
LOCUS       DATIKR010000481         2426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_43899, whole genome shotgun sequence.
ACCESSION   DATIKR010000481 DATIKR010000000
VERSION     DATIKR010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43899"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1346)
                     /locus_tag="VLL76_07505"
     CDS             complement(60..1346)
                     /locus_tag="VLL76_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011743944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV29387.1"
                     /translation="MTKISRRSFNGLLGAAGALTLAGGLSACAGAGGGSGRVVVVGGG
                     FGGATAAKYLKRYDPSLDVTLIDANASHFTCPFSNTVIAGMNDMPFIEQKFDKLTAKY
                     GVKFVQGMVVGIDPAKKTVTTKDGTTFAYDKLVVSPGIDFKWNAIPGYDEAAAEIMPH
                     AWKAGPQTALLRKQLEAMPNGGHVVISAPGNPFRCPPGPYERASLIAYYLKKHKPKSK
                     VIILDSKDAFAKDKLFKEGWEKMYEDLIEWVPAAKNGKVAKVDAKAGVVETDFEKFKP
                     SVANIIPPQTAGMLAVKAGLTNETGFCPVNPNTFESTKAKDVYVIGDASIAGAMPKSG
                     YSASSQAKVAAAAIVAELSGGKPMPMSAINTCYSLLAPDYGISVAAVFSVQDGKIDAI
                     KGSGGVSPMGANYNFRKKEADFANGWFASVVQDTWA"
     gene            complement(1357..1659)
                     /locus_tag="VLL76_07510"
     CDS             complement(1357..1659)
                     /locus_tag="VLL76_07510"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV29388.1"
                     /translation="MRGTTLPLCLAIGLALAPFAAKAADPVAVMADACAGCHGTDGHS
                     VGAMPAFSNKKLDELKSMLREYKAGKREPTVMDRIAKGYSDEQLDAIAVYFASRKK"
     gene            complement(1798..2169)
                     /locus_tag="VLL76_07515"
     CDS             complement(1798..2169)
                     /locus_tag="VLL76_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV29389.1"
                     /translation="MLNRLFGNIFPAAPESDNVRIVDAAEIKRWVEAGEVALFDVREP
                     NEYAVEHIAGACNLPLSSFDPAKVLVPEGKKLVIHCRSGARCGMAAARMVAAGYTGEI
                     NRMQGGIFGWKSVGGPTRTGG"
BASE COUNT          409 a          754 c          804 g          459 t
ORIGIN      
        1 ctaggcaccc acctccttgc ggaggcaggt gcccaatact tcgcgatgac tagacctgat
       61 taggcccagg tgtcctgaac cacgctggcg aaccaaccat tggcaaaatc cgcttccttc
      121 ttgcggaaat tgtagttggc acccatcggg ctgacaccac ccgagccctt gatggcgtcg
      181 atcttgccat cctggaccga gaacaccgcc gccaccgaga tgccgtaatc cggcgccagc
      241 agcgagtagc aggtgttgat ggccgacatc ggcatgggct tgccgcccga cagctcggcg
      301 acgatggcgg cagccgccac cttggcctgg ctggaagccg agtagcccga cttcggcatg
      361 gcgccggcga tcgaggcgtc accgatgacg tagacgtcct tggccttggt cgactcgaag
      421 gtgttcgggt tgaccgggca gaagccggtt tcgttggtca ggccggcctt gacggccagc
      481 atgccggcgg tctgcggcgg gatgatgttg gccaccgacg gcttgaactt ctcgaagtcg
      541 gtttccacca cgccggcctt ggcgtcgacc ttggcgacct taccgttctt ggcggcgggg
      601 acccactcga tcaggtcctc gtacatcttt tcccagcctt ccttgaacag cttgtccttg
      661 gcgaaggcat ccttggaatc caggatgatg accttcgact tcggcttgtg cttcttcagg
      721 taataggcga tcaggctggc gcgctcgtac gggccgggcg ggcagcggaa cggattgccg
      781 ggggccgaga tgaccacgtg gccgccgttc ggcatggctt ccagctgctt gcgcagcagg
      841 gcggtctgcg gaccggcctt ccaggcgtgc ggcatgatct cggcagcggc ttcgtcatag
      901 cccgggatgg cgttccactt gaagtcgatg cccggcgaga ccaccagctt gtcgtaggcg
      961 aaggtggtgc catccttggt ggtcaccgtc ttcttggcgg ggtcgatgcc gaccaccatg
     1021 ccctggacga acttcacgcc gtacttggcg gtcagcttgt cgaacttctg ctcgatgaac
     1081 ggcatgtcgt tcatgccggc gatcacggtg ttcgagaacg ggcaggtgaa gtgcgacgcg
     1141 ttggcgtcga tcagggtcac gtccagcgag ggatcgtagc gcttgaggta cttggcggcg
     1201 gtcgcaccgc cgaagccgcc accgacgacg accacacggc cgctgccgcc accggcaccg
     1261 gcgcaagccg aaaggccgcc ggccagggtc agggcgccgg ccgcgcccag cagtccgttg
     1321 aaggacctgc gcgaaatctt ggtcatgact gcccccttac ttcttgcggc tggcgaaata
     1381 gacggcgatg gcgtcgagct gctcgtcgct gtagcccttg gcgatgcgat ccatgacggt
     1441 cggctcgcgc ttgcccgcct tgtactcgcg cagcatggac ttcagttcgt cgagcttctt
     1501 gttcgagaac gccggcatgg cgccgaccga atgcccgtcg gtgccgtggc agccggcgca
     1561 ggcgtcggcc atcaccgcga ccgggtcggc cgccttggcc gcgaacggcg ccagcgccag
     1621 cccgatggcc agacacaatg ggagcgtggt tcccctcatg acaaattcct ccctgaacgt
     1681 tttttaacgt ttatattagg agaaattatc agcccgccgc ctgattgaca atagtcaagg
     1741 ctagctcgcc caaaggggta gccgtcagat gaggagttgt gcgggaaaga gaggggatca
     1801 gccgcccgtg cgggtgggac cgccgaccga tttccagccg aaaatgccac cctgcatgcg
     1861 atttatctcg ccggtatagc cggcggcgac catgcgggcg gcagccatgc cgcaacgcgc
     1921 gcccgagcgg cagtggatca ccagcttctt gccttcgggc accagcacct tggcgggatc
     1981 gaacgacgac agcggcaggt tgcaggcgcc ggcaatgtgc tcgacggcgt attcgttggg
     2041 ctcgcgcacg tcgaacagcg cgacctcgcc ggcctcgacc caacgcttga tctcggcggc
     2101 gtcgacgatg cggacgttgt cgctttccgg ggcggccggg aagatgttgc cgaacagacg
     2161 gttgagcatg gcggggtcct gcgggttcat agtttagctt gacctaatat aaatgcggcg
     2221 gcgcgaattg caagctcgca attgcaacat agtgagaatc gctcgcgact tcacccccca
     2281 ttaacgccgc ccggccatga tcgggctccc cggttccggg gcaaatccga acattggagg
     2341 gcgggcatgc gaggcgtgtg gtcgtcgtgg gtcgcgctgg cggttgccgg tgcgctgacg
     2401 ggctgtggcg gcggcggtgg cggcgg
//
LOCUS       DATIKR010000482         1930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_18753, whole genome shotgun sequence.
ACCESSION   DATIKR010000482 DATIKR010000000
VERSION     DATIKR010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18753"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VLL76_07520"
     CDS             complement(<1..344)
                     /locus_tag="VLL76_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV29390.1"
                     /translation="MSQSAASALPLVDLRGVHLKLASLAGEVNVLRGMDLAIGPGETV
                     GIVGPSGSGKSTLLMVVAGLERASQGQVVVAGHDLSALDEDRLARFRRDHVGIVFQSF
                     HLVPTMTALENVA"
     gene            439..1008
                     /locus_tag="VLL76_07525"
     CDS             439..1008
                     /locus_tag="VLL76_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HSV29391.1"
                     /translation="MAETRILALGDSLTAGYGLPAEAAFPAQLERALKAQGYDVRVIN
                     AGVSGDTSAGGLARLDWALADDPQIAIVELGANDGLRGLAPAEMEKNLDAILTRLKAK
                     GIKVILAGMLAPPNYGRQYADDYAKVFPRLARRHDVAFYPFFLDGIASDPKLNLPDGL
                     HPTEQGVGRVVERILPTVKQVLGKPGRTG"
     gene            1005..>1930
                     /locus_tag="VLL76_07530"
     CDS             1005..>1930
                     /locus_tag="VLL76_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HSV29392.1"
                     /translation="MSTKKAAAAVSPAPFTLAHARADHWGLAVKACLEGVADAAAGAN
                     VGFLYATEAFAADLPSILTFLRETTRIQSWVGAVTPGIVAGDQEYRDGGALAVMVGGL
                     DPDSFRCFASLDAADLRRGIGGLPYGVALVHGDPRNPGLPALVEAAAGDAGFLVGGLV
                     SLAGPPAQVADSVVSGGLSGLLLAPEIEVVAGLTQGCSPLGPSHLVTEASDGVLMKLD
                     GRPALEVLKEDAGELIARDIRRAAGYIHVGLPVPGSDTGDYLVRTLVGMDPRQNWLAV
                     GDRVEVGTRLMFVRRDANAARADMRRMLDGVTA"
BASE COUNT          281 a          697 c          659 g          293 t
ORIGIN      
        1 gccacgttct ccagcgccgt catggtcggc accaaatgga aggactggaa cacgatgccg
       61 acatggtcgc ggcggaaccg cgccagcctg tcctcgtcca gcgccgacag atcgtggccg
      121 gccaccacca cctggccctg gctggcgcgc tcgagaccgg ccaccaccat caacagggtg
      181 gacttgcccg agccggacgg cccgacgatc cctaccgtct cgccagggcc tatcgccaag
      241 tccatgccgc gcagaacgtt gacctcgccc gccaagctcg ccaacttgag atggacgccc
      301 ctaagatcga ccaggggcaa ggcagaagcg gcggactggc tcatgcgttc tctttcgggg
      361 atggtcattt gggggaggcg cgctctggtc ggatatggcg cccttgccct gcttgtcaac
      421 acagcgatcg gagaagcctt ggccgagacc cggattcttg cgctgggcga ttcgctcacc
      481 gccggctacg gcctgccggc cgaggccgcc tttcccgccc aattggaacg cgcgctcaag
      541 gcccagggct atgacgtccg cgtcatcaac gccggcgtgt cgggcgacac cagtgccggc
      601 ggattggccc ggctggactg ggcgctggcc gacgatcccc aaatcgccat cgtcgagctg
      661 ggcgccaatg acggcctgcg cggtctggcc ccggccgaga tggaaaagaa cctcgacgcc
      721 atcctgacgc ggctcaaggc caagggcatc aaggtgatcc tggccggcat gctggcgcca
      781 cccaattacg gccggcaata tgccgacgac tacgccaagg tgtttccgcg cctggccagg
      841 cgccacgacg tggcgttcta tccgttcttc ctggatggga tcgcctcgga ccctaaactg
      901 aacctgcccg acggcctgca ccccacggaa cagggcgtcg gccgggtggt cgaacgcatc
      961 ctgcccaccg tcaagcaggt gctgggcaag cctgggagga ccggatgagc accaagaaag
     1021 ccgctgccgc cgtgtcgccc gcccccttca ccctggccca cgcccgcgcc gaccattggg
     1081 gcctggcggt caaggcctgc ctggagggcg tggcggacgc cgccgccggg gccaatgtcg
     1141 ggttcctcta tgccaccgag gccttcgccg ccgacctgcc cagcatcctg accttcctgc
     1201 gcgagaccac ccgcattcag tcctgggtgg gcgcggtgac gcccggcatc gtggccggcg
     1261 accaggaata ccgcgacggc ggcgccttgg cggtgatggt tggcgggctc gaccccgact
     1321 cgttccgctg cttcgccagc ctggacgccg ccgatctgcg ccgcggcatc ggcggtctgc
     1381 cctacggcgt cgccctggtt cacggcgacc cgcgcaatcc cggcctgccg gccttggtcg
     1441 aggcggccgc cggcgacgcc ggctttctgg tcggtggcct ggtgtcgctg gccgggccgc
     1501 cggcccaggt ggccgacagc gtggtgtcgg gcggcctgtc gggcctgttg ctggcgcccg
     1561 aaatcgaggt ggtggccggc ctgacccagg gctgctcgcc gctggggccg tctcacctgg
     1621 tcaccgaggc gtcggacggc gtgctgatga agctcgacgg ccgaccggcg ctggaggtgc
     1681 tcaaggagga tgccggcgag ctgatcgccc gcgacatccg ccgcgccgcc ggctacatcc
     1741 atgtcggcct gccggtgccc ggctccgaca ccggcgatta cctggtgcgc accctggtcg
     1801 gcatggaccc gcgccagaac tggctggcgg tgggcgaccg cgtcgaggtg ggcacgcgac
     1861 tgatgttcgt gcgccgcgac gccaacgccg cgcgcgccga catgcgccgc atgctcgacg
     1921 gcgtgacggc
//
LOCUS       DATIKR010000483         1902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_152670, whole genome shotgun sequence.
ACCESSION   DATIKR010000483 DATIKR010000000
VERSION     DATIKR010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152670"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VLL76_07535"
     CDS             <1..302
                     /locus_tag="VLL76_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucosaminidase"
                     /protein_id="HSV29393.1"
                     /translation="TGEPDMRVFETLHEAVRAYVHNLNSHAAYESLRRTRAAARARGS
                     LPDGHSLAGSLTAYSERGRAYVDAIRALIRANKLMRYDHARLDPSRGRLSLAQAE"
     gene            299..1186
                     /locus_tag="VLL76_07540"
     CDS             299..1186
                     /locus_tag="VLL76_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1848 domain-containing protein"
                     /protein_id="HSV29394.1"
                     /translation="MIVSASYRTDIPAFYGDWFLNRFTAGYAKVRNPYGGPVSTVPLH
                     QGVDGFVFWTRNAAPFRPALRAVRRAGIPFVVTYTVTGYPRALEISVIEADKAVADIR
                     ALADEFGPRAVVWRYDPILLSSLTPADFHLEIFARLAGALAGAVDEATLSFANIYRKT
                     ARNLAAAARAHGFDWWDPPAEDKRALAARLGELAASHGMRATICSQADYTVAGTSPAA
                     CIDARRLEDVAAGWGVPRTVTARRKGNRPGCECFESRDIGDYDTCPHGCTYCYAVGSR
                     ALAKRRYQAHDPTAESLYP"
     gene            complement(1294..>1902)
                     /locus_tag="VLL76_07545"
     CDS             complement(1294..>1902)
                     /locus_tag="VLL76_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSV29395.1"
                     /translation="PTESFPRPDPWQSAKAVAAVVGLLALFATPLPREVGALVIGAAL
                     LLSRKLGSRDMIGAVDWHLLLLFACLFVVTDSFASTGLAGQGVELMAEWGLMPDKLSV
                     MAPLMLAASNTIGNVPATMLILSIWPIADAGPLYGLALLSTLAGNLLLVGSLANIIVA
                     ERAASVGVRLSFLDFAKAGIPMTLGSLALAVAWLGLGGWMGW"
BASE COUNT          305 a          708 c          625 g          264 t
ORIGIN      
        1 ccaccggcga acccgacatg cgggttttcg aaaccctgca cgaggcggtg cgggcctatg
       61 tccacaacct caacagtcac gccgcctatg aatccctgcg gcggacccgg gcggcggcgc
      121 gggcgcgcgg cagcttgccc gacggccatt ccctggccgg cagcctgacc gcctattccg
      181 aacgcggccg cgcctatgtg gacgccatcc gggcgctgat ccgcgccaac aagctgatgc
      241 gttacgacca cgcccggctc gatccctccc gcggccggct cagcctggcg caggcggaat
      301 gatcgtttcg gccagctatc gaacagacat ccccgccttc tacggcgact ggttcctcaa
      361 tcgcttcacc gccggctacg ccaaggtccg caatccctat ggcgggccgg tctccaccgt
      421 gccgctgcac cagggggtgg acggtttcgt cttctggacc cgcaacgccg cccccttccg
      481 cccggccctg agggcggtgc gccgggccgg catcccgttc gtcgtcacct acaccgtcac
      541 cggctacccc cgcgcgctgg agatttcggt aatcgaggcc gacaaggcgg tcgccgacat
      601 ccgcgccctg gccgacgaat tcggcccgcg cgcggtggtg tggcgctacg accccatcct
      661 gctgtcgtcg ctgacgccgg ccgacttcca cctggagatt ttcgcccgcc tggccggggc
      721 tttggccggg gcggtggacg aggcgaccct gtcgttcgcc aacatctacc gcaagacggc
      781 ccgcaacctg gccgccgccg cccgcgccca tggcttcgac tggtgggatc cgccggccga
      841 ggacaagcgg gcgctggcgg cgcggctggg cgagttggcc gccagccacg ggatgcgggc
      901 gacgatctgc tcgcaggctg attataccgt tgccggaaca agtccggcgg cctgcatcga
      961 tgcccgtcgg ctcgaggatg tggcggccgg ctggggcgta ccgcgcaccg tcacggcgcg
     1021 gcgcaagggc aaccggccgg gctgcgagtg cttcgagtca cgcgacatcg gcgactacga
     1081 cacctgcccg cacggctgca cctattgcta cgccgtcggc tcgcgcgcct tggcgaagcg
     1141 gcggtaccag gcccacgacc ccacggccga gagcctgtac ccctgatacc gtgtcccgaa
     1201 gggactaggc ccaaagggcc gcgcggctga tgccgcggga ggcaagggtt tcggagaaac
     1261 ccgcccgccg cttgagggcg ctaatgatcg cttctaccac cccatccagc cgcccagccc
     1321 cagccacgcc accgccaggg ccagcgaccc cagtgtcatg gggatgccgg ccttggcgaa
     1381 atccaggaac gacagacgca cccccaccga ggcggcgcgt tcggccacga tgatgttggc
     1441 gaggctgccc accagcaaca ggttgcccgc cagcgtcgac agcaacgcca gcccatagag
     1501 cggcccggcg tcggcgatcg gccagatgga caggatcagc atggtcgccg gcacgttgcc
     1561 gatggtgttg ctggccgcca gcatcaacgg cgccatcacc gacagcttgt cgggcatcag
     1621 cccccattcc gccatcaact cgaccccctg gcccgccaag ccggtggacg cgaagctgtc
     1681 ggtgaccacg aacaggcagg cgaacagcag cagcaggtgc cagtccaccg cgccgatcat
     1741 gtcgcggctg ccgagtttgc gcgacagcag caaggcggcg ccgatcacca aggcgccgac
     1801 ctcgcgcggc agcggcgtgg cgaacagcgc cagcaagccg accaccgccg ccaccgcctt
     1861 ggccgattgc cagggatcgg ggcgggggaa gctttcggtc gg
//
LOCUS       DATIKR010000484         2144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_176813, whole genome shotgun sequence.
ACCESSION   DATIKR010000484 DATIKR010000000
VERSION     DATIKR010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176813"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2144
                     /locus_tag="VLL76_07550"
     CDS             <1..>2144
                     /locus_tag="VLL76_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5-oxoprolinase/urea amidolyase family protein"
                     /protein_id="HSV29396.1"
                     /translation="YFLEVNTRLQVEHGVTEQVTGIDLVEWMVRQAAGELAEMNVPEP
                     KGASIQVRLYAEDPGKNFLPCSGKLTHVDFPADARVDSWVDSGTEVTPFYDPMLAKII
                     VTGTDRADALAKLRKALADTQVYGIETNLDYLSAIAASDMLATGKVSTKALADFAYQP
                     STVDVLSPGAQSSLQDWPGRLGYWDVGVPPSGPMDNLSHRIANRLVGNPEDAAALEIT
                     LSGPTLRFNCPTTIALAGADMGATLDGVPVPLYQPVAVAAGQVLAMGAVKGAGNRAAL
                     AVRHGFDAPLYLDSRSTFALGRFGGHATGCLRTGDVLRLNHQGAGSPGADTVPQEIRP
                     KLVHDWMIGVLVGPHGAPDFFTEADIATLFEAEYQVHFNSARTGVRLVGPKPEWARAD
                     GGEAGLHPSNIHDNAYAVGALDFTGDMPIILGPDGPSLGGFVCPVTIAMAELWKVGQL
                     KPGDRVRFFRLDQDQAIRLREAQDRLVHTLKPVGMPHLLPGRMESPIVGTMREGNDAV
                     VVRQSGDDNLLVEFGPLELDLTLRFQAHALMERLKAEKVDGLVDLTPGIRSLQIHVDP
                     SRLPLAKTRSLLQAAIADLPPVDQISVPTRTIHMPLSWDDESTQLAIRKYQELVRPDA
                     PWCPSNIEFIRRINGLADEQAVKDIVFGASYLVLGLGDVYLGAPVATPMDPRHRLVTT
                     KYNPARTWTPENAVGIGGAYMCIYGMEGPGGY"
BASE COUNT          345 a          741 c          707 g          351 t
ORIGIN      
        1 ctatttcctg gaggtcaaca cccgcctgca ggtcgagcac ggcgtcaccg agcaggtgac
       61 cggtatcgat ctggtggaat ggatggtgcg ccaggccgcc ggcgaactgg ccgagatgaa
      121 cgtgcccgag cccaagggcg ccagtatcca ggtgcgcctg tacgccgagg atccgggcaa
      181 gaacttcctg ccctgctcgg gcaagctgac ccatgtggac ttccccgccg acgcccgcgt
      241 cgatagttgg gtggacagcg ggaccgaggt gacgccgttc tacgacccca tgctggcgaa
      301 gatcatcgtt accggcactg accgcgccga cgcgctggcc aagctgcgca aggcgctggc
      361 cgacacccag gtctacggca tcgagaccaa cctcgattat ctgtccgcca tcgcggcctc
      421 ggacatgctg gcgaccggca aggtctcgac caaggcgctg gccgactttg cctatcagcc
      481 atccaccgtc gacgtgctgt ctcccggcgc ccagagcagc ctgcaggact ggccggggcg
      541 gctgggctat tgggatgtgg gcgtgccgcc cagcggcccc atggataacc tgtcgcaccg
      601 catcgccaac cggctggtcg gcaatcccga ggatgcggcg gcgctggaaa tcaccctgtc
      661 cggtccgacc ctgcgcttca actgcccgac caccatcgcc ctcgccggtg ccgacatggg
      721 cgccacgctg gacggtgtgc cggtgccgct gtaccaaccg gtcgcggtgg cggccgggca
      781 ggtgctggcc atgggggcgg tgaagggcgc cggcaaccgc gccgccctgg cggtacgcca
      841 cggcttcgac gcgccgctgt acctggacag ccgctccacc ttcgcgctgg gccgcttcgg
      901 cggccatgcc accgggtgcc tgcgcactgg cgacgtgctg cgcctgaacc atcagggtgc
      961 gggcagccct ggcgccgaca cggtgccgca ggaaatccgc cccaagctgg tgcacgactg
     1021 gatgatcggc gtgttggtcg gcccgcacgg cgctcccgat ttcttcaccg aggccgacat
     1081 cgccaccctg ttcgaggcgg aatatcaagt ccatttcaac agcgcccgca ccggcgtgcg
     1141 gctggtcggc cccaagccgg aatgggcccg cgccgacggc ggcgaggccg ggctgcaccc
     1201 gtccaacatc cacgacaacg cctatgcggt gggtgcgctg gatttcaccg gcgacatgcc
     1261 catcatcctg ggtccggatg gtccctcgct gggcggattc gtctgcccgg tcaccatcgc
     1321 catggccgag ctgtggaagg tgggtcagct gaagccgggc gaccgcgtcc gcttcttccg
     1381 cctggaccaa gaccaggcca tccgcctgcg cgaggcccag gaccggctgg tccacacgct
     1441 gaagccggtg ggtatgccgc atctgctgcc cggtcggatg gaaagcccga ttgtcggcac
     1501 catgcgtgaa ggcaacgatg cggtcgtggt gcgccagtcg ggcgacgaca atctgctggt
     1561 cgagttcggt ccgctggagt tggacctgac gctgcgcttc caggcccatg ccctgatgga
     1621 gcgcctgaag gcggaaaagg tggacggact ggtcgacctg acccccggca tccgttcgct
     1681 gcaaatccat gtcgacccgt ctcgcctgcc gctggccaag acccggtcgc tgctgcaggc
     1741 ggccatcgcc gatctgccgc cggtggatca aatctcggtg cccacccgca ccatccacat
     1801 gccgctgtcg tgggacgatg aatccaccca actggccatc cgcaagtacc aggaactggt
     1861 gcgcccggat gctccctggt gtccgtccaa tattgagttc atccgtcgca tcaacggtct
     1921 ggccgacgaa caggcggtca aggacatcgt gttcggggca tcctatctgg tgctgggcct
     1981 gggcgacgtc tatctgggtg cgccggtggc gacgcccatg gacccgcgcc atcggctggt
     2041 caccaccaag tacaatcccg cccgcacctg gacgccggaa aacgcggtgg ggatcggcgg
     2101 cgcctatatg tgcatctatg gcatggaagg tcccggcggc tatc
//
LOCUS       DATIKR010000485         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_115887, whole genome shotgun sequence.
ACCESSION   DATIKR010000485 DATIKR010000000
VERSION     DATIKR010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115887"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /locus_tag="VLL76_07555"
     CDS             <1..984
                     /locus_tag="VLL76_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSV29397.1"
                     /translation="ALAKPKANAPSYTSVFAKALINEARHDDKIVAISAAMPAGTGLD
                     VFGELYPERCFDVGIAEQHAVTFAAGLACEGFKPFCALYSTFLQRGYDQVVHDAVLQK
                     LPVRFAIDRAGLVGADGATHAGAFDLAYLGCLPDIVLMAPADEAELMHAVATAVAIDD
                     RASAFRYPRGEGVGCDLPERGEILPIGKGRILREGNRVAILSLGTRLGESLKAADDLA
                     ARGLSTTVADARFMKPLDEELILRLAREHEVLVTVEEGSIGGFGSHVLHFLAVSGALD
                     RGLKVRPMTLPDRFQDHNAPKTQYDEAGLNAPQIVAAVLACLGQDAAVIPA"
     gene            1181..1504
                     /locus_tag="VLL76_07560"
     CDS             1181..1504
                     /locus_tag="VLL76_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV29398.1"
                     /translation="MELEKLQESARRASTLLKAMSNEHRLMILCQLLDSEKSVGELER
                     LIGLSQSALSQHLARLRRDNLVQTRRQAQTIFYSLSGEEASAVINTLYGLYCAKQDGA
                     ICAAQ"
     gene            complement(1518..2378)
                     /locus_tag="VLL76_07565"
     CDS             complement(1518..2378)
                     /locus_tag="VLL76_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009770336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV29399.1"
                     /translation="MHPDVTGFFDPATSSVSYVVGDPASGNVAIIDPVLDYDPRAGRV
                     STHSADRLADFVRERGLAVKWVLDTHVHADHMSALSYLRDELGAPGGIGAHVTDVQET
                     FRGFYSVEPEFPADGSQFDRLFADGDTFSLGKTEGRVLHIPGHTPACVAYLIGDALFT
                     GDALLMPDFGTARCDFPGGDARQLHRSIRRLLELPPATRVFVGHDYGPGGRDVAWETT
                     IAAQKAGNVHIRDGVSEEVFVELRAARDATLELPALMLAAVQVNIRAGRMPPPEANGV
                     SYLKIPVTRG"
BASE COUNT          470 a          914 c          857 g          415 t
ORIGIN      
        1 gccctggcca agccgaaggc caacgccccc agctacacct cggtgttcgc caaggcgctg
       61 atcaacgaag ccaggcacga cgacaagatc gtcgccatca gcgccgccat gccggccggc
      121 accggcctcg acgtgttcgg cgagctgtac cccgagcgct gcttcgacgt cggcatcgcc
      181 gagcagcacg cggtgacctt cgccgccggc ctggcctgcg agggcttcaa gccgttctgc
      241 gcgctttatt ccaccttcct gcagcgcggc tacgaccagg tggtgcacga cgcggtgctg
      301 cagaagctgc cggtgcgctt cgccatcgac cgcgccgggc tggtcggcgc cgacggcgcc
      361 acccatgcgg gcgccttcga cctggcctat ctcggctgcc tgccagacat cgtgctgatg
      421 gcgccggccg acgaagccga attgatgcac gccgtcgcca ccgccgtcgc catcgacgac
      481 cgcgcctcgg ccttccgcta tccgcgcggc gagggcgtcg gctgcgacct gcccgagcgc
      541 ggcgagatcc tgcccatcgg caagggccgc atcctgcgcg agggcaaccg cgtcgccatc
      601 ctaagcctgg gcacccgcct gggcgaatcg ctgaaggcgg ccgacgatct ggcggcgcgc
      661 ggcctgtcca ccaccgtggc cgacgcccgc ttcatgaagc cgctggacga ggagctgatc
      721 ctgcggctgg cgcgcgagca cgaggtgctg gtcaccgtcg aggaaggctc gatcggcggc
      781 ttcggcagcc atgtcctgca tttcctggcc gtctcgggcg cgctggaccg cggcctcaag
      841 gtgcggccca tgaccctgcc cgaccgcttc caggaccaca acgcgcccaa gacgcaatac
      901 gacgaagccg gcctgaacgc gccgcaaatc gtcgctgcgg tgctggcctg cctgggccag
      961 gacgcggccg ttatccccgc gtgatttaga atatcataat taagcaatat gtactacacg
     1021 cggcgccaaa aggtgtggca ggattaatct acagcaacca cagagcacgg gggagacaat
     1081 ggacacctcg ctggacatac tccgctgtag aaatattgaa acatcgaatt tgagtggtat
     1141 gatatattcc gatgcactgc accgcttagg gctgtcggaa atggaattgg aaaagttaca
     1201 ggaaagcgcc cgccgcgcca gcacgctgct caaggccatg agcaacgagc accggctgat
     1261 gatcctgtgc cagctgctgg acagcgaaaa gtcggtgggc gagcttgaac gcctgatcgg
     1321 cctgtcgcaa tcggcgctgt cgcagcatct tgcccggctc cgccgcgaca acctggttca
     1381 gacccgccgc caagcccaga cgatcttcta ttcgctgtcg ggcgaagagg ccagcgcggt
     1441 catcaatacc ctgtacggcc tgtactgcgc caagcaggac ggggcgatct gcgccgcgca
     1501 atagcgcggc gcctcctcta cccccgcgtc accgggattt tcagatagct gacgccgttc
     1561 gcctcgggcg gcggcatcct gcccgcgcgg atgttgacct gcaccgccgc cagcatcaac
     1621 gcgggcagct ccagggtggc gtcgcgtgcc gcgcgcagct ccacgaacac ctcttcggac
     1681 accccatcac ggatatggac gttgccggcc ttctgggcgg cgatggtggt ctcccatgcc
     1741 acgtcacggc cgccggggcc ataatcgtgc ccgacgaaca cgcgggtcgc gggcggcaat
     1801 tccagcaggc ggcggatcga gcggtgcagt tggcgtgcgt cgccgccggg gaagtcgcag
     1861 cgcgccgtgc cgaaatccgg catcagcaac gcgtcgccgg tgaacagggc atcgccgatc
     1921 agataggcga cgcaggcggg cgtatggccg gggatatgca gcacccgccc ttccgttttg
     1981 cccagtgaaa atgtatcgcc atcggcgaac aggcggtcga attgtgagcc atcggccggg
     2041 aactccggtt cgacgctgta gaatccccgg aacgtctcct gcacgtcggt gacatgggca
     2101 ccgattcccc cgggcgcccc caattcatcg cgcagatagg acagcgccga catgtggtcg
     2161 gcgtggacat gggtgtcgag cacccacttc accgccaggc cgcgctcgcg cacgaaatcc
     2221 gccagccggt cggcggaatg ggtggagacg cggccggcgc gcgggtcgta atccagcacc
     2281 ggatctataa tcgcaacgtt ccccgaagcc gggtcgccga ccacgtagct gacggacgag
     2341 gtggcagggt cgaagaaacc ggtgacgtcg ggatgcatgc ggggaccctc cttcgttacc
     2401 gaaatcggcc ccgtgccggg gttttcaacc tgcagccttt gaagaggccc gtcgaaagac
     2461 atgtcctggc gccctgctca ccacaactcc ccctgccgtt catcgcgttc cgccagcacg
     2521 gcgcgggcca gcggcacggt gatggcgcgg cgttcggcca gcgaggcctt gtcgagcgcg
     2581 tccacgacgg cgccgacggc ggcgaagctg cgttccatgc ggcccagcag gaaggccagc
     2641 acgtcctcgc cgatgc
//
LOCUS       DATIKR010000486         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_127915, whole genome shotgun sequence.
ACCESSION   DATIKR010000486 DATIKR010000000
VERSION     DATIKR010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127915"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VLL76_07570"
     CDS             complement(<1..1383)
                     /locus_tag="VLL76_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV29400.1"
                     /translation="MSLGISGSIAKAFIKSPLTPLLLLASLMVGMIALGALPREEEPQ
                     ISVPMVDIMIEANGLRAEDAAELVTKPLEDIVKGVDEVEHVYSQTFDDRVIVTARFDV
                     GTSEDAAILRVHEQVRAHLADVPYGIREPMIVGRGINDVAVVVLTLAPKPGKADRWDD
                     NALFNLAEELQHELVKVDDIGLTYIVGGRRDQIRVEPDPEALALYGVTLNQLVDKVEN
                     ANRSFMVGAVAEAGRHLPVVGGQSLKGPEIGNLLLITRDGRPVYVKDVARVVVGGASP
                     EYRAWNMVRGADGQLERSPAVSLAIAKRAGANAVTVSEEILGRLDHVKGSLIPADVDV
                     TVTRNYGETASDKADELLFHLALATVSIVALITWMLGWREGVVVALVVPTTILLTLFA
                     SWLMGYTINRVSLFALIFSIGILVDDAIVVVENIHRHRMLTPHESLKVLIPRAVDEVG
                     GPTILATFTVI"
BASE COUNT          241 a          514 c          512 g          243 t
ORIGIN      
        1 gatcacggtg aacgtggcca ggatggtcgg gccgccgacc tcgtccaccg cgcgcggaat
       61 cagcaccttg agcgactcgt gcggcgtgag catgcggtga cgatggatgt tctccaccac
      121 cacgatggcg tcgtccacca ggatgccgat ggagaagatc agcgcgaaca ggctgacgcg
      181 gttgatggtg tagcccatca gccacgatgc gaacagggtc agcaggatcg tggtcggcac
      241 caccagcgcc accaccacgc cctcgcgcca gcccagcatc caggtgatca gggcgacgat
      301 ggaaacggtg gccagggcca ggtggaacag cagttcgtcg gccttgtccg aggccgtctc
      361 gccgtaattg cgggtgacgg tgacgtccac gtcggcgggg atcaggctgc ccttgacgtg
      421 gtcgagccgg cccaggattt cctcggacac cgtcaccgcg ttggcgccgg cgcgcttggc
      481 gatggcgagc gacaccgccg ggctgcgctc caactggccg tcggcgccgc gcaccatgtt
      541 ccaggcgcgg tattccgggc tggcgccgcc caccaccacg cgggcaacgt ccttgacgta
      601 gaccgggcgg ccgtcgcggg tgatcagcag cagattgccg atctcgggac ccttcaggga
      661 ttggccgccg accactggca gatggcggcc ggcctcggcc acggcgccga ccatgaacga
      721 gcggttggcg ttctcgacct tgtccaccag ttgattgagc gtcacgccgt acagcgccag
      781 cgcttcgggg tcgggttcga cccggatctg gtcgcggcgg ccgccgacga tgtaggtcag
      841 gccgatgtcg tccaccttga ccaactcgtg ctgaagctcc tcggccaggt tgaacagggc
      901 gttgtcgtcc cagcgatcgg ccttgccggg cttgggcgcc agcgtcagca ccaccacggc
      961 gacgtcgttg atgccgcgcc cgacgatcat gggctcgcgg atgccatagg gaacgtcggc
     1021 cagatgggcg cggacctgct cgtgcacgcg caggatggcg gcatcctcgc tggtgccgac
     1081 gtcgaagcgg gcggtgacga tgacgcggtc atcgaaggtt tgggaataga cgtgctcgac
     1141 ctcgtcgacg cccttgacga tgtcctccag cggcttggtc accagttcgg cggcgtcctc
     1201 ggcccgcagg ccgttggcct cgatcatgat gtccaccatg gggacgctga tctgcggctc
     1261 ttcctcgcgc ggcagcgcgc ccagcgcgat catgcccacc atcagcgacg ccagcagcag
     1321 cagcggcgtc agcggcgact tgatgaaggc cttggcgatg cttcccgaga tgcccaggct
     1381 catggcgctc accacgccac cgtgtcgccg gccttcaggc cggacagcac ctcgaccccg
     1441 tcctcggcga cggcgcccac ctgcaccacc acctcggtgc cgtccttgag gcggacgtag
     1501 tcgaggccga
//
LOCUS       DATIKR010000487         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_30978, whole genome shotgun sequence.
ACCESSION   DATIKR010000487 DATIKR010000000
VERSION     DATIKR010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30978"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VLL76_07575"
     CDS             <1..660
                     /locus_tag="VLL76_07575"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29401.1"
                     /translation="LAHELNQPLLATIAFTRAAQRLLAGDSPDRDKAGGALDRAVAEA
                     QRAGEIVRTLREFIGTGMTDRSANSLADMVADAAALVTPEAARRGLRMVVAVDKSLPA
                     VHVDRVQVQQVLLNLVRNAMDAVTDHAPPREVAVQAWPEDGAVVVEVRDTGPGIADEV
                     AERLFQPFNTSKASGMGLGLSISRSIVEAHGGRLWLAANGPQGAAFRFTLLKCETGDH
                     A"
     gene            657..1274
                     /gene="fixJ"
                     /locus_tag="VLL76_07580"
     CDS             657..1274
                     /gene="fixJ"
                     /locus_tag="VLL76_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator FixJ"
                     /protein_id="HSV29402.1"
                     /translation="MTTKPIVHIVDDEAAIRDSLVMLLESAGHAARAHVDAVSFLGAI
                     DPHQPGCVVADVRMPGMSGLELQKHLRNDRIDLPVIIITGHGDVAMAVSALKEGAADF
                     IEKPFDEDVLLKAVDAALDKGARVFRERQELADIESRVAELTPREREVMDLVVQGLPN
                     KAVAAELDISVRTVEIHRARVMEKMEAKSLSELVRMALRLEEGSA"
BASE COUNT          295 a          568 c          555 g          281 t
ORIGIN      
        1 ctcgcccacg agctgaacca gccgctgctc gccaccatcg ccttcacccg cgccgcccag
       61 cgcctgctgg ccggcgacag ccccgatcgc gacaaggcgg gcggggcgct cgaccgcgcc
      121 gtggccgagg cgcagcgggc cggcgagatc gtgcgcaccc tgcgcgagtt catcggcacc
      181 ggcatgaccg accgctcggc caattcgctg gccgacatgg tcgccgacgc ggcggcgctg
      241 gtcacgcccg aggcggcccg gcgcggcctg cgcatggtcg tcgcggtgga caagtcgctg
      301 ccggccgtcc atgttgacag ggtgcaggtg cagcaggtgc ttctcaacct ggtgcgcaac
      361 gccatggacg cggtgaccga tcatgcaccc ccgcgcgagg ttgccgtgca ggcctggccg
      421 gaggacggcg ccgtcgtcgt cgaggtgcgc gacaccggcc ccggcatcgc cgacgaagtc
      481 gccgaacgcc tgttccagcc gttcaacacc tcgaaggcga gcggcatggg gcttgggctg
      541 tccatcagcc gcagcatcgt cgaggcccat ggcgggcgcc tgtggctggc cgccaacgga
      601 ccccaggggg cggcgttccg cttcaccctg ctgaaatgcg aaaccggaga ccacgcatga
      661 ccaccaagcc gattgtccac atcgtcgatg acgaagccgc catccgcgac tcgctggtga
      721 tgctgttgga atcggcgggg catgccgccc gcgcccatgt cgacgccgtg tccttcctcg
      781 gcgccatcga tccccaccag cccggctgcg tggtcgccga cgtgcgcatg cccgggatga
      841 gcggactgga attgcaaaag cacctgcgca acgaccgcat cgacctgccg gtgatcatca
      901 tcaccggcca tggcgacgtc gccatggcgg tcagcgccct caaggaaggc gccgccgact
      961 tcatcgaaaa gccgttcgac gaggacgtgc tgctgaaggc ggtggacgcg gcgctggaca
     1021 agggcgcccg cgttttccgc gagcgtcagg aactggccga catcgaatcg cgcgtcgccg
     1081 aactcacccc gcgtgagcgc gaggtcatgg acctggtggt gcaggggctg cccaacaagg
     1141 cggtcgcggc cgaactcgac atctcggtgc gcacggtcga gatccaccgt gcccgggtga
     1201 tggagaagat ggaggcgaag agcctgtccg agctggtgcg catggccctg agactggaag
     1261 agggaagcgc ctgaacgctt ccctccccgg cattccctct acttccgcgc acccatcttc
     1321 gccgttatgc gcctggcatg aaataggtaa ttgccactag aggatgtccc gtaaataact
     1381 ccacctagat atttaccgct agggacttcc ccgaattcaa ttcggccatg gagctaacta
     1441 ctctgaaaag agatccaatg gtctcggctg agtgtttgct tgccgagacc tcggaaacgg
     1501 tggcgaaatg gcggcatcaa gcaatggtga agggccacgg gtacaggctg cccgtctggc
     1561 ttccgccatg cgatcttttc ttgagctgga atcggcgggt ggcatcatcc tggtcgggat
     1621 gatgatcgtt gccctgctgg tggtgaactc gccgctggcc tccgcctatt ggcataccct
     1681 ggaaattcac gcggtcatc
//
LOCUS       DATIKR010000488         3162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_152723, whole genome shotgun sequence.
ACCESSION   DATIKR010000488 DATIKR010000000
VERSION     DATIKR010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152723"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..160)
                     /locus_tag="VLL76_07585"
     CDS             complement(<1..160)
                     /locus_tag="VLL76_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002745248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV29403.1"
                     /translation="MDIAIVTGSAGLIGSEAVRFFADKGLKVVGIDNNLRQTFFGEDG
                     STAWNRQQL"
     gene            complement(194..1099)
                     /locus_tag="VLL76_07590"
     CDS             complement(194..1099)
                     /locus_tag="VLL76_07590"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29404.1"
                     /translation="MRDVERCPVCDGTVFATVWESTFPGAGWCDAVPYFLTNRVAAVH
                     GRIVRCGQCGFHLTSPQFSSDDYGRIYSAVHSGGAGPTAGAGGRARHAQLARRVRGHE
                     AAGGRFLDFGCGDGAFLDQMADFDATGFEVENGLPEGVARDGRIVRGDILSGWDALEG
                     AGLKPASLDFIVAWDVLEHLADPKAQLRRLAELLKPGGRLYLTLPDMASPAARLSGEH
                     WNCVLLEHLWYFTPQTLARFLPDCGFTADAIGPIGFPVDLGTIARRLRQTYGRWVPHP
                     PRFADSIVLSLPIGLMFAACRKRAD"
     gene            complement(1099..2601)
                     /locus_tag="VLL76_07595"
     CDS             complement(1099..2601)
                     /locus_tag="VLL76_07595"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV29405.1"
                     /translation="MTSPLPPYLATLQRRESLRDHYHAHRDPIAAERMLWQAQSFRHM
                     VHLLPGEPILEIGGGAGGFTRALVSMTRGRNPLTSVTSTAAGAVETVEWHNIEALPGP
                     LAGRTFRYIVAYNILDRDNIGELMGTIFDLLEEGGRCVFFEANPWNLLYSARHSLRRM
                     MDRPDAQSLLDRTQLYELFSEIGFIRVSARFTDFVYAPLAPTRGMAWLLRNLSVLLEN
                     APVVKSFAGQIILHAQKPPRTVPRNPVSLCRHDSLKGAVSFVVPCHNEEMNIPPLVDG
                     LRQFYGDYIHQIVLVNDNSRDRTAEVMDRLAAEDPRITPVHRTPPNGVGRALRDGYAA
                     ATGRYVMSMDCDFQHLLPEMEDMFEAAADGADAVFGSRFSRSSVLINYPFGKIFANRS
                     FHALANVVLRFGRRDVTNNLKLMHIDLVRQLVIEEPWFAANAEIGLQLALLGKDVREV
                     PISWINRTFDMGTSSFKVLKSGGGYARVLWRFAKKTGFGRRALETAPAAE"
     gene            complement(2598..>3162)
                     /locus_tag="VLL76_07600"
     CDS             complement(2598..>3162)
                     /locus_tag="VLL76_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29406.1"
                     /translation="LAFAASTHPGSAENYYFAAAFLALVATVAALRSGAFPSLAAIWA
                     AAWLAQAGLLAYALTPGGAIKNLDGVHASLTTMDSCLQPVPKPMLVADQYLSLPWMRA
                     GAEPLASSYGYAPGRAAGLAFEGGGVGGLIEAGRFAALALPEPADPFDGGRLFRYERT
                     PLACGHLRVFLRKDLAAPPSAVPALSP"
BASE COUNT          535 a         1025 c         1158 g          444 t
ORIGIN      
        1 ccagctgctg gcggttccag gcggtcgatc cgtcctcgcc gaagaaggtc tggcgcaggt
       61 tgttgtcgat gccgaccacc ttgaggccct tgtcggcgaa gaagcggacg gcttccgatc
      121 cgatcaggcc tgcggaaccc gtgacaatcg cgatatccat gcgtgaacca atcccaagag
      181 aagcgcccgg gcctcagtcc gcccgcttgc ggcaggcggc gaacatcagg ccgatgggga
      241 gcgatagcac aattgaatcg gcgaatcgag gcggatgcgg cacccagcgc ccatatgtct
      301 ggcgcagccg gcgggcgatg gtgccgaggt ccaccgggaa gccgatggga ccgatggcgt
      361 cggccgtgaa gccgcaatcg ggcaggaagc gcgccagcgt ctggggcgtg aaataccaca
      421 ggtgctcgag cagcacgcaa ttccagtgct cgccgctcag ccgcgccgcc ggactggcca
      481 tgtcgggcag ggtcagatag aggcgcccgc cgggcttcag caattccgcc agccggcgca
      541 attgcgcctt ggggtcggcc aggtgttcga gcacgtccca ggcgacgatg aaatcgaggc
      601 tcgccggctt caggccggca ccctccagcg cgtcccaccc ggacaggatg tcgccgcgca
      661 cgatccggcc gtcgcgcgcc acgccctcgg gcaggccgtt ctcgacctcg aagccggtcg
      721 cgtcgaaatc cgccatctgg tcgaggaagg cgccgtcgcc gcagccgaaa tcgaggaagc
      781 ggccgcccgc cgcctcgtgg ccgcgcaccc gcctggccaa ttgcgcgtgg cgggcgcggc
      841 cgccggctcc ggcggtgggg ccggcgccgc cggaatggac ggcggaatag atgcggccgt
      901 aatcgtcgga gctgaattgc ggcgaggtca ggtggaagcc gcattggccg caacggacga
      961 tgcggccgtg gaccgccgcc acccggttgg tcaggaaata gggaacggcg tcacaccagc
     1021 ccgcgccggg gaaggtcgat tcccacaccg tcgcgaagac ggtgccgtcg cagaccgggc
     1081 aacgctcgac gtcgcgcatc actcggcggc gggcgcggtt tcgagcgcgc ggcggccgaa
     1141 gccggtcttc ttggcgaagc gccacagcac gcgggcatag ccgccgccgg acttcaggac
     1201 cttgaacgac gacgtgccca tgtcgaaggt gcggttgatc cacgagatcg ggacctcgcg
     1261 cacgtccttg cccagcagcg ccagttgcag gccgatctct gcgttggcgg cgaaccacgg
     1321 ctcctcgatg accaactggc ggaccaggtc gatatgcatg agcttgaggt tgttggtgac
     1381 gtcgcggcgg ccgaagcgca gcacgacgtt ggccaaggcg tggaagctgc ggttggcgaa
     1441 gatcttgccg aacggatagt tgatcagcac gctgctgcgc gaaaagcggc tgccgaacac
     1501 cgcgtcggcg ccgtcggcgg cggcctcgaa catgtcctcc atttccggca gcaggtgctg
     1561 gaagtcgcag tccatggaca tgacgtagcg cccggtcgcc gccgcatagc cgtcgcgcag
     1621 cgcccggccg acgccgttgg gcggggtgcg gtgcacgggg gtgatgcggg gatcctcggc
     1681 cgccagccgg tccatcacct cggcggtgcg gtcgcggctg ttgtcgttga ccagcacgat
     1741 ctggtggatg tagtcgccgt agaactggcg caggccgtcc accagcggcg ggatgttcat
     1801 ttcctcgttg tggcacggca ccacgaacga caccgcgccc ttcagcgagt cgtggcggca
     1861 cagcgacacc ggattgcgcg gcacggtgcg cggcggcttc tgggcgtgca ggatgatctg
     1921 gccggcgaag cttttgacca ccggcgcgtt ttccagcagc accgacaggt tgcgcagcag
     1981 ccacgccatg ccgcgcgtgg gcgccagcgg ggcgtagacg aagtcggtga agcgggccga
     2041 gacgcggatg aagccgatct cggagaacag ctcgtacaac tgggtgcggt ccaacagcga
     2101 ctgggcgtcg ggccggtcca tcatgcggcg tagcgaatgg cgcgccgaat agagcaggtt
     2161 ccacggattg gcttcgaaga agacgcagcg gccgccttcc tcgagcaggt cgaagatggt
     2221 gcccatcaat tcgccgatgt tgtcgcggtc caggatgttg taggcgacga tgtagcggaa
     2281 ggtgcggccg gccagcgggc ccggcagcgc ctcgatgttg tgccactcga cggtctcgac
     2341 cgcgccggcc gccgtcgagg tcacgctggt cagcgggttg cggccgcgcg tcatcgacac
     2401 cagggcgcgg gtgaagccgc ccgcgccgcc gccgatctcg aggatgggct cgcccggcag
     2461 cagatggacc atatggcgga aggattgcgc ctgccacagc atgcgctcgg cggcgatcgg
     2521 atcgcggtgg gcgtggtaat ggtcgcggag gctttcgcga cgctgcaggg tggccaggta
     2581 aggcgggagg gggctcgtca tgggctcaac gcaggaaccg ccgagggcgg cgccgccaaa
     2641 tcctttcgca agaaaacccg cagatggccg catgccagcg gcgtcctctc gtaccggaaa
     2701 agcctgccgc cgtcaaatgg gtcggcgggt tcgggcagcg ccagggcggc gaagcggccg
     2761 gcttcgatca ggccgccgac gccgccacct tcgaaagcca ggccggccgc gcggccgggg
     2821 gcatagccat aggacgaagc cagcggctcg gcccccgccc gcatccacgg cagggacaga
     2881 tactggtcgg ccaccagcat cggcttggga accggctgca ggcaggaatc catggtcgtc
     2941 agcgaggcat ggacgccgtc caggttcttg atcgcgccgc ccggcgtcag ggcataggcg
     3001 agcaagccgg cctgggccag ccaggcggcc gcccagatcg cggccaggct ggggaaggcg
     3061 ccgctgcgca gcgccgccac cgtcgccacc agggcgagga aggcggcggc gaaatagtag
     3121 ttctcggcgg agccgggatg ggtcgacgcg gcgaaggcca gg
//
LOCUS       DATIKR010000489         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_31019, whole genome shotgun sequence.
ACCESSION   DATIKR010000489 DATIKR010000000
VERSION     DATIKR010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31019"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..969
                     /gene="egtD"
                     /locus_tag="VLL76_07605"
     CDS             31..969
                     /gene="egtD"
                     /locus_tag="VLL76_07605"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HSV29407.1"
                     /translation="MKRDGNDDGFREAVLDGLTRRPRRIPCRFLYDAVGSALFERITE
                     LPDYHLTRAETALLARHGPAIAASVGAGVTVVEYGAGSMRKTRLLLAELDRPSAYVPV
                     DVSQDFLVQSARRLGADLSDLPVVPLVADFTKPLTLPPPAQGPVLVFFPGSTIGNLRP
                     AEARDLMVRSARLAGPGGWLLVGVDPVRDAARLHRAYDDPQGITATFTRNLLARANRE
                     LGADFDLDCFDHAAWWNAREGRVEISLVANRRQQVAVAGHPFAFRSGESIHVEDCYKY
                     SVEQFQWLARQSGFEPVSCWADEDFSLHLLKSPACG"
     gene            1051..>1848
                     /locus_tag="VLL76_07610"
     CDS             1051..>1848
                     /locus_tag="VLL76_07610"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSV29408.1"
                     /translation="MTAHEACARLGSHLSDGLGESEAGERLVQHGPNRLPEKKPKPAW
                     RMFVEQFQSLLTLVLLGAGVLAGIIGDTTDMVVILVVVTFNAILGFHQEYRAEKILDK
                     LKGMLAQQSRVRRSGRKVEVMAEHLVPGDLVLLEAGDRVPADGRLVQAHGLEIDESTL
                     TGESEAVAKHSDRIEDAEAPLADRLNQAFMNTVVTRGRGEMVVTATGGSTEMGRIVGL
                     LETALEGKTPLQERLDHLGRRLAVIAGVVVAVIMVMGLVRGEPIAEVI"
BASE COUNT          279 a          626 c          648 g          295 t
ORIGIN      
        1 gttcaccggc ctcaggctgg cggaggattg atgaagcgag acggaaacga cgacggcttc
       61 cgcgaggcgg tgctggacgg cctgacccgc cggccgcgcc gcatcccctg ccgcttcctc
      121 tacgacgcgg tcggctcggc cctgttcgag cgtatcaccg aattgcccga ttatcacctg
      181 acgcgggccg agacggcgct gctggcccgc cacggtcccg ccatcgccgc ttcggtgggg
      241 gcgggcgtga ccgtggtgga atacggcgcc ggctccatgc gcaagacccg gctgctgctg
      301 gccgaactcg accggccgtc ggcctatgtg ccggtggacg tgtcgcagga tttcctggtg
      361 caatcggccc gccgcctggg cgccgacctg tccgatcttc ccgtggtgcc gctggtggcg
      421 gatttcacca agccgctgac gctgccgccg ccggcccagg ggccggtgct ggtgttcttc
      481 cccggctcga ccatcggcaa tttgcgcccg gccgaggccc gcgacctcat ggtccgctcg
      541 gcgcggctgg cggggccggg cggctggctg ctggtggggg tcgatccggt gcgcgacgcg
      601 gcccggctcc atcgtgccta cgacgacccc caaggaatca ccgccacctt cacccgcaac
      661 ctgctggccc gcgccaatcg cgaactgggt gccgatttcg acctggattg cttcgaccat
      721 gcggcctggt ggaacgcccg cgagggccgg gtcgaaatct cgctggtggc caaccgccgc
      781 caacaggtcg ccgtggccgg ccatcccttc gccttccgct cgggggaatc catccacgtc
      841 gaggattgct acaaatacag cgtcgaacaa ttccagtggc tggcccgcca aagcggattc
      901 gagccggttt cctgctgggc cgacgaggat ttctcgctgc atctgctgaa gtcgcccgct
      961 tgcggttgac cgctgacgcc agggacttat cttggcgacg tggcaattgc ttggggatgg
     1021 gcggtgaagc gagaccattc gtggcatacc atgaccgcgc acgaagcctg cgcgcgactg
     1081 ggttcccacc tgtccgacgg cctgggcgag agcgaggccg gcgaaaggct ggtccagcac
     1141 ggacccaacc gcctgcccga aaagaagccc aaacccgcct ggcggatgtt cgtcgagcag
     1201 ttccagagcc tgctgacgct ggtgctgctg ggcgccggcg tgctggccgg catcatcggc
     1261 gacaccaccg acatggtggt catcctggtg gtggtcacct tcaacgccat cctgggcttc
     1321 caccaggaat accgggcgga aaagatcctc gacaagctca agggcatgct ggcgcagcaa
     1381 tcgcgggtgc gccgctcggg ccgcaaggtc gaggtgatgg ccgagcatct ggtccccggc
     1441 gacctggtgc tgctggaggc cggcgaccgc gtgccggcgg acggccggct ggtgcaggcg
     1501 cacgggcttg agatcgacga atcgaccctg accggcgaat cagaggcggt ggccaagcac
     1561 agcgaccgca tcgaggatgc cgaggccccg ctggccgacc gcctcaacca ggccttcatg
     1621 aacaccgtgg tgacgcgtgg ccgcggcgag atggtggtga ccgccaccgg cggctcgacc
     1681 gagatgggcc gcatcgtcgg cctgctggaa accgcgctgg agggcaagac cccgctgcag
     1741 gaacggctcg accacctggg ccgccggctg gcggtgatcg ccggcgtggt ggtggcggtg
     1801 atcatggtca tggggctggt gcgcggcgag cccatcgccg aggtcatc
//
LOCUS       DATIKR010000490         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_44051, whole genome shotgun sequence.
ACCESSION   DATIKR010000490 DATIKR010000000
VERSION     DATIKR010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44051"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VLL76_07615"
     CDS             complement(<1..304)
                     /locus_tag="VLL76_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29409.1"
                     /translation="MPEIYPRDQANMPHRLLDQGPEQGVEVREVVGLFPDTSAMEHGV
                     EELLRNGFEHGDISLLASERTVREKLGHRLDDPVAAADDPEVPRRGYIGPEAHNEGR"
     gene            395..580
                     /locus_tag="VLL76_07620"
     CDS             395..580
                     /locus_tag="VLL76_07620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29410.1"
                     /translation="MQTGEPCYIKVMKTAAEAKTPPTVLSREQDASLRRSLDDAKAGR
                     TIDAADVIRGRTAEMRA"
     gene            complement(774..1799)
                     /locus_tag="VLL76_07625"
     CDS             complement(774..1799)
                     /locus_tag="VLL76_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HSV29411.1"
                     /translation="MKALALALLLGSAGGAAFFVLNLPLPWMLGSMTACTVAALSGMR
                     PAVPRPLRFTMIAVLGIMLGSAFTPEIVDRVGGWTGTLAGLFAAMAATSLLVTPYLRR
                     FGAMDKVTAYFAAAPGGINEMVLAGGAMGGDERDIALIHALRILLIVFAVPFGFRLVT
                     GVQGQPMTTALGSLADLAWSDAAILTACAIGGAFAARVMRWPAWMLTGPMVASAVPHL
                     MGLTASHPPAELVIVAQVVTGAGIGSRFAGLGWKDIGATARVSLGSTAIMLATSAGAA
                     GALAAATGLPFALLLLAFVPGGIAEMCLIALALGQDVAFVSTHHVLRVAMVIVAAPLA
                     FRWMGRG"
     gene            complement(1796..>2307)
                     /locus_tag="VLL76_07630"
     CDS             complement(1796..>2307)
                     /locus_tag="VLL76_07630"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019674 - NAD metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HSV29412.1"
                     /translation="RAEPVVLHPLRMSAALDGGETVEALAINEVSLLRETRQAAKLRI
                     RIDGKVRLEELICDGVLVATPAGSTAYNLSAHGPIVPIGAGILALTPISAFRPRRWRG
                     ALLPHTATVVFEILEADKRPVSAVADYTEARDVLEVRVCEDLKVDLTMMFDPEHNLEE
                     RIITEQFLP"
BASE COUNT          372 a          799 c          820 g          316 t
ORIGIN      
        1 cgcgcccctc gttatgggcc tcggggccga tatagccccg gcgcggcacc tcgggatcgt
       61 cggcggcggc gaccgggtcg tcgagccggt ggcccagctt ctcgcgcacc gtacgctcgc
      121 tggccagcag cgagatgtcg ccatgctcga agccgttgcg cagcaattcc tcgactccgt
      181 gctccatggc cgaggtgtcg gggaacaggc cgaccacctc gcgcacttcg acgccctgct
      241 ccggcccctg gtcgagcagc cgatgcggca tgttggcctg gtcgcgcgga taaatctcgg
      301 gcatgtcggc cctccctcgg gatgcgtctg ggcaccatgt gggaggccgg ggcaggcaaa
      361 gggaaggggc ctcccccaaa agggccgtcc gctggtgcaa accggcgaac cgtgctatat
      421 caaggtgatg aagaccgcag ccgaagccaa gaccccgcca accgttctgt cgcgcgaaca
      481 ggatgcttcg ttgcggcggt cgctcgacga cgccaaggcc ggcaggacca tcgacgcggc
      541 cgatgtcata cgcggccgca ctgccgagat gcgggcatga ttacgacgtt gcggtgctga
      601 ccggcgtcat ccaagcccca ttccgtcatg cccggacttg atccgggcat ccacgcggat
      661 cagcctaagc cattgttttt gaccggattc ctgcggcggc gcgtggatgg ccgggtcaag
      721 cccggccatg acggcaaagg cacaatgcgc cgtttgatgg gtttttccgc gccctaaccc
      781 cgccccatcc agcggaacgc cagcggcgcc gccacgatca ccatggccac gcgcagtacg
      841 tggtgggtcg agacgaaggc gacgtcctgg cccagggcca gggcgatcag gcacatctcg
      901 gcgatgccgc ccggcacgaa ggccagcagc agcagggcga agggcaggcc ggtggcggcg
      961 gccagggcgc ctgccgcgcc ggcgctggtc gccagcatga tggcggtcga gcccagcgac
     1021 acccgcgccg tcgcgccgat gtccttccat cccaatccgg cgaagcgcga gccgatgccg
     1081 gcgccggtca ccacctgggc gacgatcacc aattcggccg gcggatgcga ggcggtcagg
     1141 cccatcagat gcggcaccgc gctggcgacc atggggccgg tcagcatcca ggccggccag
     1201 cgcatcaccc ttgccgcgaa ggcgccgccg attgcgcagg cggtcaggat ggcggcgtcg
     1261 ctccaggcga ggtccgccag gctgcccagg gcggtggtca tgggctggcc ctggacgccg
     1321 gtgacgaggc ggaagccgaa gggcaccgcg aacacgatca gcaggatgcg cagcgcgtgg
     1381 atcagcgcga tgtcgcgttc gtcgccgccc atggcgccgc cggccagcac catctcgttg
     1441 atgccgccgg gggcggcggc gaaataggcg gtcaccttgt ccatggcgcc gaagcgccgc
     1501 agatacggcg tcaccagcag cgaggtggcg gccatggcgg cgaacagccc ggccagggtt
     1561 ccggtccagc cgccgacccg atcgacgatc tcgggggtga aggcgctgcc cagcatgatg
     1621 cccagcacgg cgatcatggt gaagcgcaac ggccggggca ccgccggccg catccccgac
     1681 agggcggcga cggtgcaggc ggtcatcgag cccagcatcc acggcagcgg caggttcagc
     1741 acgaagaacg ctgcgccgcc ggcactgccc aacagcaggg ccagcgccag ggccttcacg
     1801 gcaggaattg ctcggtgatg atgcgttcct cgagattgtg ctcggggtcg aacatcatgg
     1861 tcaggtcgac cttgaggtcc tcgcacaccc gcacctcgag cacgtcgcgc gcctcggtgt
     1921 agtcggccac cgccgagact gggcgcttgt cggcttccag gatctcgaac accacggtgg
     1981 cggtgtgcgg cagcagggcg ccgcgccagc gccgggggcg gaaggcgctg atgggggtca
     2041 gggccaggat gccggcgccg atgggcacga tggggccgtg ggccgacaaa ttgtaggcgg
     2101 tcgagccggc cggcgtcgcc accagcacgc cgtcgcagat cagttcctcc agccgcacct
     2161 tgccgtcgat gcggatgcgc agcttggccg cctggcgggt ctcgcgcagc agcgacacct
     2221 cgttgatcgc cagcgcctcg acggtctcgc cgccgtccag cgcggcgctc atgcgcaggg
     2281 gatgcagcac caccggctcg gcccggt
//
LOCUS       DATIKR010000491         2833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_55396, whole genome shotgun sequence.
ACCESSION   DATIKR010000491 DATIKR010000000
VERSION     DATIKR010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55396"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..387)
                     /locus_tag="VLL76_07635"
     CDS             complement(<1..387)
                     /locus_tag="VLL76_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29413.1"
                     /translation="MKLGNILEGGLKAVLNAATSGLAGQIWDTIESALPDDMPPEKRA
                     ELKLQLERVAMEREIAGNQAAGEAERNLTERISVLEGTAKDLMAMPILGRLILFARGC
                     QRPAWGFALMVIDYRIFDGSMKVPTEG"
     gene            complement(391..807)
                     /locus_tag="VLL76_07640"
     CDS             complement(391..807)
                     /locus_tag="VLL76_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003796 - lysozyme activity [Evidence
                     IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA];
                     GO_process: GO:0016998 - cell wall macromolecule catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family protein"
                     /protein_id="HSV29414.1"
                     /translation="MDDFLPDLIGDLRRDEGFRSKPYRCTAGKLTIGYGRNLDDVGLT
                     EREGAHLLGNDAVTAIQECRARFAWFDGLSPRRKRAVANMAFNMGIDRLLGFKKMLAA
                     LAAGDYDRAADEAQDSAWFHQVGVRGSRVVAMIREG"
     gene            complement(821..1099)
                     /locus_tag="VLL76_07645"
     CDS             complement(821..1099)
                     /locus_tag="VLL76_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29415.1"
                     /translation="MDLIWWVTAVELPALGGLFVLIWRSRSEHADRCDEIEDKLTHVE
                     SQAREALAAYKLEVAKSYATTGYLKDVERRLTEHLVRIEAKLDSVKAA"
     gene            complement(1214..>2833)
                     /locus_tag="VLL76_07650"
     CDS             complement(1214..>2833)
                     /locus_tag="VLL76_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29416.1"
                     /translation="PFPIFKAADLEVFVDDVKQVGGYTVTGAGQTAGGEVAFTVPPAA
                     GTLVTLRRRLVVQRVTDFQADGVIRAKTLNDELDYLTATVQQLDDDLSRVPARSATSA
                     SEANLTLPDPVAGRSIKWAADGLSLVNSDNDPDAIASTVTSAAANAVTAADTATGAAG
                     VATAAAATATTAAQAAQTAAAAVGDPLDRNQNLADVPDKGAARSALEVYSTAEADLII
                     AQLMAPLTARLGFLETNLAVNTLRDQIDAGWSVLKMANGIADEFEDAAGIADLGGGTY
                     DATGDYVHNPGIGATTASPDPAGSTDVAGTTAIVIDDVILTNGSAYMAFGYYSIIAGA
                     VTIKIVKENSATSYDVVSEVTYTHPGGGWADASHSYTVPATGTYKLCAYRGAVNHDNT
                     TVKSAHRYSGNPTGNAVAFTSNPADWAPSMRATKSAPPPAVTTKSIAYTAAGYTIADP
                     PVEARLVVLHQAISTLAVNIDFVAEVSRDDGATWSVITLDNLGPFDATTSILAGVAWL
                     ASQPAGVTMRWRIRYLNNKEQRLHGVWMQWR"
BASE COUNT          425 a          919 c          954 g          535 t
ORIGIN      
        1 cccctcggtt ggcaccttca tcgaaccgtc gaagatccgg tagtcgatga ccatcagggc
       61 gaagccccag gctgggcgct ggcacccccg ggcgaacagg atcagccggc cgaggatagg
      121 catggccatc agatccttgg ccgtgccctc aagcacactg atccgttccg tcaggttgcg
      181 ctcggcctcg ccggcggctt ggttgccggc gatctcgcgc tccatggcga cgcgttcgag
      241 ctgcagcttc agctcggccc gcttctcggg gggcatgtcg tcgggcaggg cgctctcgat
      301 cgtgtcccaa atctgtccgg ccagcccgct ggtcgcggcg ttgaggacgg ccttcaggcc
      361 gccctctagg atgttgccca gcttcatgat ctaaccctcc ctgatcatgg cgaccacgcg
      421 cgaaccgcgt acgccgacct ggtggaacca ggcgctgtcc tgggcttcgt cggccgcgcg
      481 gtcgtagtcg ccggcggcga gggcggccag catcttcttg aagcccagca ggcggtcgat
      541 gcccatgttg aacgccatgt tggccaccgc ccgcttgcgg cggggcgaca gcccgtcgaa
      601 ccaggcgaag cgggcgcggc attcctggat cgcggtgacg gcatcgttgc ccagcaggtg
      661 ggcgccttcg cgctcggtca ggccgacgtc gtcgagattg cggccatagc cgatcgtcag
      721 cttgccggcg gtgcagcggt agggcttcga gcggaagcct tcgtcgcggc gcagatcgcc
      781 gatgaggtcg ggcagaaagt cgtccatgat ttcccctcct ttacgctgcc ttgacgctgt
      841 caagcttggc ctcgatgcgc accaggtgct cggtcagtcg gcgctcgacg tccttcaaat
      901 agcccgtagt cgcataggac ttggccactt ccagcttgta ggcggccaat gcttcgcgag
      961 cctggctttc cacgtgggtc agcttgtctt cgatttcgtc gcaacggtcg gcgtgttcgc
     1021 tccgactgcg ccagatcagg acaaacagcc cccctaacgc cggcagttca acggcagtca
     1081 cccaccagat caggtccaag gtccaatgat tctccaattc gtcctcctta ggcggcgggt
     1141 gccggcacgt ccggctgttt gggttgcttg accggcttgt ctccgggctt gattgggaaa
     1201 ggcggcatgg cggttacctc cattgcatcc acacgccgtg caggcgctgt tccttgttgt
     1261 tcagatagcg gatcctccag cgcatggtga cgccggcggg ctggctcgcc agccaggcga
     1321 caccggccag gatcgaggtc gtcgcgtcga acggtccaag gttgtcgagg gtgatgacgg
     1381 accatgttgc gccgtcgtcg cggctgactt cggcgacgaa gtcgatgttg acagccaagg
     1441 tgctgatcgc ctggtgcagg acaaccaggc gtgcttccac cggcggatcc gcgatcgtgt
     1501 agccagcggc cgtgtaagcg atcgacttgg tggtgacggc gggcggcggg gcggacttcg
     1561 tcgcccgcat gctgggcgcc caatcagcgg gattgctcgt gaacgccacg gcgttgccgg
     1621 tgggattgcc ggaatagcgg tgagccgact tgaccgtggt gttgtcgtga ttgaccgccc
     1681 cacgataggc acaaagctta tacgtcccgg tcgccgggac ggtgtaggaa tggctggcat
     1741 ccgcccatcc gccgccgggg tgggtgtacg tgacctcgga aaccacgtcg taactggtgg
     1801 cggaattttc cttgacgatc ttgatggtga cggcgccggc gattatcgag taatagccga
     1861 acgccatgta ggcgcttccg ttcgtcagga tcacatcgtc gatgacgatg gcggtcgtgc
     1921 cggccacgtc cgtcgatccg gccggatctg ggcttgccgt cgtcgcaccg atgcccggat
     1981 tgtgaacgta atcgccggtc gcatcatagg tgccgccgcc aaggtccgcg atcccggccg
     2041 cgtcttcaaa ttcgtccgca atcccgttgg ccatcttcag caccgaccaa ccggcgtcga
     2101 tctgatcgcg tagcgtgttg acggccaaat tcgtctccag gaaccccaac cgggccgtca
     2161 gcggggccat cagttgggca atgatcaggt cggcctcggc cgtcgagtag acctcgagcg
     2221 ccgaccgcgc agcccccttg tcgggcacgt cggccagatt ttgattccgg tcgagcggat
     2281 cgccaacggc ggcggcggcg gtctgggcgg cctgggcggc cgtggtcgcc gttgccgccg
     2341 cagccgtggc cacgccggcg gccccagtcg cagtgtcggc cgcggtcacc gcatttgcgg
     2401 ccgcgctggt gaccgtgctc gcaatggcgt cgggatcgtt gtcgctgttg accagcgaca
     2461 gaccgtcggc cgcccacttg atcgaccggc cggccacggg atcaggcagg gtcaggttcg
     2521 cttcgctggc gctggtggcg gaccgcgccg gcacgcgcga caagtcgtca tccagctgct
     2581 gcacggtggc ggtcaggtaa tccagttcgt cgttcagcgt cttggcgcgg atcacgccgt
     2641 cggcctggaa atcggtgacg cgctgtacga ccaggcggcg gcgcagcgtc accagcgtgc
     2701 cggcggccgg cggcacggtg aacgccactt cgccgccggc ggtctgtccg gcgccggtca
     2761 ccgtgtagcc gcccacctgc ttgacgtcgt cgacgaacac ctcgaggtcg gccgccttga
     2821 agatggggaa cgg
//
LOCUS       DATIKR010000492         2837 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_55403, whole genome shotgun sequence.
ACCESSION   DATIKR010000492 DATIKR010000000
VERSION     DATIKR010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55403"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLL76_07655"
     CDS             complement(<1..296)
                     /locus_tag="VLL76_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007006087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HSV29417.1"
                     /translation="MMDITNLFTRRPLVTVIRMTGIIAAGGGFVRGGINLANQAAILK
                     HAFAPKRLAAVALVVNSPGGSPVQSSLIGQRIRQHAAERNVPVVAFVEDVAASGG"
     gene            complement(436..1878)
                     /gene="pyk"
                     /locus_tag="VLL76_07660"
     CDS             complement(436..1878)
                     /gene="pyk"
                     /locus_tag="VLL76_07660"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSV29418.1"
                     /translation="MRRTRNAKIIATLGPATTTPQAIEGLFIAGADVFRLNFSHGSHA
                     DHQARYDTIREIEKKVRRPIGILADLQGPKLRVGKFAAGKIKLETGAAFRLDLSDEPG
                     TQQRAPLLHPEVFAALHAGTDLLLDDGKIRLRVEKHGLDFAETRVITGGDLSNHKGVN
                     VPNAVLPISPLTEKDIADLEFAVDMGVDWIALSFVQRPTDVLEARRRISEKVGSRVRL
                     LSKLEKPSAIDHLEEIIALSDAVMVARGDLGVECPPETVPILQKRIVKACRTAGKPVV
                     VATQMLDSMVHSPSPTRAEASDVATAIYDGADAVMLSAETAAGDFPIDAVTMMDRIIN
                     RVEQDDHYRVITDASRSRPENTTRDAISAAARQVASTVNAAAVVTFTSSGSTTLRAAR
                     ERPEQPIISLTADIEVARQLAIVWGAHNVQTAEVRSFSEMVSKALMTAQREGFAKIGD
                     RVVITAGVPFGLTGTTNILRVAEIEEDGAV"
     gene            complement(1982..>2837)
                     /locus_tag="VLL76_07665"
     CDS             complement(1982..>2837)
                     /locus_tag="VLL76_07665"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV29419.1"
                     /translation="RFALVTGLTLAMGMAGAVGGQMPLAAAVAAVGWRGTMWAAAIVA
                     GLLAVVLWLLVRDGDHPAAAVPEGHGLGAGLRMVLATPHTYVIALYSLTMAGPMLAFA
                     GLWGVPYLMQMHGLERSDAALTTSAMLIGWGIGSPLTGWISDRMGRRKPALVFAALGA
                     LVSAGVALYLPGLDLATRQVWLFLMGLTSGGFVLSFATGREYAPAWAGGAALGVVNTA
                     SMASGAIFQPLIGWLLDLNWEGASAAGVRVYGPQAWETAFLAVLACQVVALACAVISK
                     ETRCRHLR"
BASE COUNT          447 a          959 c          996 g          435 t
ORIGIN      
        1 ccgcccgacg ccgccacgtc ctcgacgaag gcgaccaccg ggacgttgcg ctcggccgcg
       61 tgctggcgga tgcgttgccc gatcagcgag ctttgcaccg gcgagccgcc cggcgagttg
      121 accaccagcg ccaccgccgc cagccgcttg ggggcgaagg cgtgcttcag gatggccgcc
      181 tggttggcga ggttgatgcc gccgcgcacg aagccgccgc cggccgcgat gatgccggtc
      241 atgcggatga cggtgacgag cggccgacgg gtgaagaggt tcgtgatgtc catcattgag
      301 cctttgccgt catggccggg cttgacccgg ccatccacgc ggcgccgcag gaactcattt
      361 aaaggcgatg acttaggctg atccgcgtgg atgcccggat caagtccggg tatgacgggg
      421 caggaaactt caagtttaaa ccgctccgtc ttcctcgatc tcggcgaccc gcaggatgtt
      481 ggtcgtgccg gtcaggccga aggggacacc ggcggtgatg acgacgcggt cgccgatctt
      541 ggcgaagcct tcacgctggg cggtcatcag cgccttggac accatctccg agaagctgcg
      601 cacctcggcg gtctggacgt tgtgggcgcc ccagacgatg gcgagctggc gggccacctc
      661 gatgtcggcg gtcaggctga tgatcggctg ttcgggccgc tcgcgggcgg cgcgcagcgt
      721 ggtcgagccg gacgacgtga aggtcaccac ggcggcggcg ttgacggtcg aggccacctg
      781 ccgcgcggcg gccgagatgg catcgcgggt ggtgttctcg gggcgcgagc gcgaggcgtc
      841 ggtgatgacc cggtaatggt cgtcctgttc gacccggttg atgatgcggt ccatcatcgt
      901 cacggcgtcg atggggaagt cgccggcggc cgtttcggcc gacagcatca ccgcgtcggc
      961 gccgtcatag atggcggtgg cgacgtcgga ggcctcggcg cgggtcggcg acggcgaatg
     1021 gaccatggaa tccagcatct gggtggcgac caccaccggc ttgccggcgg tgcggcaggc
     1081 cttgacgatg cgcttttgca ggatcggcac ggtctcgggc gggcattcca cgcccagatc
     1141 gccgcgcgcc accatcaccg cgtcgctgag cgcgatgatc tcttccaggt ggtcgatggc
     1201 cgacggcttc tcgagcttcg acagcaggcg cacgcggctg cccaccttct cgctgatgcg
     1261 gcggcgggcc tccagcacgt cggtggggcg ctgcacgaag gacagggcga tccagtcgac
     1321 gcccatgtcg acggcgaatt ccaggtcggc gatgtccttt tccgtcagcg gcgagatcgg
     1381 cagcaccgcg ttggggacgt tgacgccctt gtggttggac aggtcgccgc cggtgatgac
     1441 gcgggtctcg gcgaaatcca ggccgtgctt ctcgacgcgc aagcggatct tgccgtcgtc
     1501 cagcagcagg tcggtgccgg catgcagggc ggcgaacacc tcggggtgga gcagcggcgc
     1561 gcgctgctgg gtgccgggtt cgtcggacag gtcgaggcgg aaggcggcgc cggtttccag
     1621 cttgatcttg ccggcggcga acttgccgac gcgcagcttg ggaccctgca aatcggccag
     1681 gatgccgatg gggcggcgga ccttcttttc gatctcgcgg atggtgtcgt agcgggcctg
     1741 gtggtcggcg tggctgccgt ggctgaaatt cagccggaac acgtcggcgc cggcgatgaa
     1801 caggccttcg atcgcctgag gggtcgtggt ggccggcccc agcgtggcga tgattttcgc
     1861 gtttcttgtt cttctcatcg catccttcct ttgatgtcgc cgcaccatag cagagcaggc
     1921 gccaagcgca taccgcccca ggggtgcagc gcacccccta tgcccacggt ggggggctct
     1981 cctaccgcag gtggcgacac ctggtttcct tggaaatcac cgcgcatgcc aaagcgacca
     2041 cctggcaagc cagcaccgca aggaacgccg tctcccaggc ctgggggcca tagacccgca
     2101 cgccggccgc gctcgccccc tcccaattga ggtcgagcag ccacccgatc aagggctgga
     2161 aaatggctcc tgaagccatg gacgcggtgt tgaccacccc cagcgcggca ccgcccgccc
     2221 aggccggcgc atactcgcgg ccggtggcga aggacagcac gaaaccaccc gatgtcagcc
     2281 ccatcaggaa cagccagacc tgccgcgtcg ccagatccaa cccgggtagg taaagcgcta
     2341 cccccgccga caccagcgcg cccagcgcgg cgaacaccag ggccggcttg cgccgtccca
     2401 tgcgatcgct gatccatccg gtcaggggcg agcctatgcc ccagccgatc agcatggccg
     2461 aggtggtaag cgcggcgtcc gaccgctcaa gcccatgcat ctgcatcaga tagggcacgc
     2521 cccacaggcc ggcgaaggcc agcatcggcc cggccatggt caggctgtag agcgcgatga
     2581 cgtaggtatg aggcgtcgcc agcaccatgc gcaggccggc gcccagaccg tggccctcgg
     2641 gcaccgctgc cgccggatgg tcgccgtcgc gcaccagcag ccacagcacg accgccagca
     2701 ggccggcgac gatggcagcc gcccacatgg tgccgcgcca gcccaccgcc gccaccgctg
     2761 ccgccagcgg catctggccg cccaccgcgc cggccatgcc catggccagc gtcaggccgg
     2821 tgaccagggc gaagcgg
//
LOCUS       DATIKR010000493         2508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_7209, whole genome shotgun sequence.
ACCESSION   DATIKR010000493 DATIKR010000000
VERSION     DATIKR010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7209"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1673)
                     /locus_tag="VLL76_07670"
     CDS             complement(<1..1673)
                     /locus_tag="VLL76_07670"
                     /inference="COORDINATES: protein motif:HMM:NF016991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HSV29420.1"
                     /translation="MTRVTTEAQRTQSGQRPAEAQLRRSSILDDSGRAILTDSPPTSL
                     AEFAAAGRTVHRSGIDAAASNRHTAAHFADATGRPLAAVLGDDLPIVRNRLRYECRNN
                     GDAAGMIGNLATLAVGTGPMLQIRTGDRALDRLVEEHHADWAEDCWFGIRNQSISDRE
                     ALAFRELALAGEDFLTYADDETAAYDRVRMRLVPIAPERISTPTGELGGRIRDGVETD
                     GRGRVIRYHVSRTHPEDNGAADWARWGTYDVVDAADMEHSYLHVECGQHRGMPLFSPA
                     LGEMAQTRRFVQAVLSAVESQADLAVLLETNSDIVDPENLTGYNQIPLHRNTIANLPR
                     GYSAKGFQPTQPGINHTDYMRERLRSMGRPLLFPYNVSAGDSRGLTFAGGRMDHQLLV
                     MAIAVWRAWRVRKVLRPCLLRWLREAALAIPQLAALRSLDLRRLARKAAYVWPSALPQ
                     GNPLQEAKADTERLHNGTVTEASLAAEHGGDYEANLIATADCIRRRLEMIRDLTAEAA
                     QTLGCDEAAARETVMAMLQSRPSATPVSAEMPGRRGGNNANRRGAEDAE"
     gene            complement(1670..1882)
                     /locus_tag="VLL76_07675"
     CDS             complement(1670..1882)
                     /locus_tag="VLL76_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29421.1"
                     /translation="MATLAQQIAAIDDAIAKGRAEVQEGDVRVRYHSMREMLDARARL
                     MAELTQASAAGGLGIGLVPLAHGDAK"
     gene            2085..2294
                     /locus_tag="VLL76_07680"
     CDS             2085..2294
                     /locus_tag="VLL76_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29422.1"
                     /translation="MSKANTMTMAQARTLGYRVVRGAYQTTADDRMDRWYIEHESDRV
                     VDRRGGGYLTRAAALEAIAGRVASE"
BASE COUNT          350 a          757 c          964 g          437 t
ORIGIN      
        1 ttctctgcgt cctctgcgcc tctgcggttg gcgttgtttc cgccgcgtcg gccgggcatt
       61 tcggcggaga cgggcgtggc cgagggtcgg ctttgcagca tcgccatcac cgtctcgcgg
      121 gcggcggctt cgtcgcagcc cagcgtttgg gcggcctcgg ccgtcaggtc gcggatcatt
      181 tccagccggc ggcggatgca gtcggccgtc gcgatgaggt tcgcttcgta atccccgccg
      241 tgctcggcgg ccagggaggc ctcggtgacc gtgccgttgt gcagccgctc ggtgtcggcc
      301 ttggcttcct gcagcgggtt accctggggc agcgccgagg gccagacgta ggcggccttt
      361 cgggccaggc ggcggaggtc cagcgaccgc agggcggcga gctgggggat cgccagggcg
      421 gcctcgcgca gccagcgcag caggcagggg cggagcactt tgcggacgcg ccatgcccgc
      481 cagacggcga tggccatcac gagcagctgg tggtccatgc ggccgcccgc gaaggtcaaa
      541 cccctggaat cgccggccga gacgttgtac gggaacagca gcgggcggcc catgctgcgc
      601 agccgctccc gcatgtagtc ggtatggtta atgccgggct gggtgggctg aaatcctttg
      661 gccgagtagc ctcgcggcaa attggcgatg gtgtttcggt ggagggggat ctggttgtag
      721 ccggtcaggt tctcggggtc gacgatatcg gagttggttt ccagcagcac ggccaggtcc
      781 gcctggcttt cgacggcgga gaggaccgcc tggacgaatc gccgcgtctg ggccatctcg
      841 cccagagccg gcgagaacaa cggcatgccg cgatgttggc cgcactcgac gtgcagataa
      901 ctgtgctcca tgtcggcggc gtcgacgacg tcgtaggtgc cccagcgggc ccagtcggcg
      961 gcgccgttgt cctcggggtg cgtccgggaa acgtggtagc ggatgacgcg gccgcggccg
     1021 tcggtctcca cgccgtcgcg gatgcgtccg ccgagttcgc ccgtcggggt gctgattcgc
     1081 tcgggcgcga tggggaccag tctcatgcgg acgcggtcgt aggcggcggt ttcgtcgtcg
     1141 gcgtaggtga ggaagtcctc gccggccagg gcgagctcgc ggaacgcgag cgcctcgcgg
     1201 tcggagatgg attggttacg gatgccgaac cagcagtcct ccgcccagtc ggcgtggtgc
     1261 tcttcgacga gccgatccag ggcgcggtcg cccgtgcgga tttggagcat ggggcccgtg
     1321 ccgaccgcca gcgtggccag gtttccgatc atgccggcgg cgtcgccgtt gttgcggcat
     1381 tcgtaccgca ggcggtttcg cacgatgggc aggtcgtcgc cgagcacggc ggccaggggc
     1441 cggccggtgg cgtcggcgaa atgggcggcg gtgtggcggt tgctggcggc ggcgtcgatg
     1501 ccgctgcggt gcacggtgcg gccggcggcg gcgaattcgg ccaggctcgt gggcggggaa
     1561 tcggtgagga tcgcccggcc ggagtcgtcg aggatgctcg agcggcggag ctgcgcctcg
     1621 gctggcctct gcccgctctg tgtcctctgt gcctctgtgg tgacgcgtgt catttcgcgt
     1681 ctccatgggc caggggaacc aggccgatgc ccagcccgcc ggcggcggag gcctgggtca
     1741 gttcggccat cagccgggcg cgggcgtcga gcatttcccg catcgagtgg tagcggacgc
     1801 gcacgtcgcc ttcctggacc tctgcgcggc ccttggcgat tgcgtcgtcg atcgcggcga
     1861 tctgttgtgc gagggtggcc atctgctggc gttatgggcg gcgctctcgc ctggtggcaa
     1921 caggaatcta ccgaaaacct cgcgggagtc tacccgtata ccgtcggacg aaaaatattt
     1981 ctgctgattt ctatttttcc ccttgacggc tggctatacg ctgcgtatag tattggcatg
     2041 aagatgcggc gcgtggccgc gtaaccatag acgaggagac gaagatgagc aaggcgaaca
     2101 caatgacgat ggcgcaggcg cgcacgctgg ggtatcgcgt cgtgcgtggc gcgtaccaga
     2161 ccacggccga tgaccgcatg gaccgctggt acatcgagca tgagagcgat cgggttgtgg
     2221 accggcgcgg cggcgggtat ctgacccgtg cggcagcatt ggaggcgatt gccggccgag
     2281 tggccagcga gtaggccctg cccctatccc cctgcatcgg cggggggagt gggatacggc
     2341 ctgcgtggtg cgggcggctg acgagtaacc gggcgagagc ccaaaggaga caacaatgcg
     2401 taactatcac gacttcgagg cggcgctggc ggactggagc gaccagggcg gcgcgatgat
     2461 gtaccagagc gaggcgagcg atgcgcccag gccgctgtgg caggtggg
//
LOCUS       DATIKR010000494         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_128005, whole genome shotgun sequence.
ACCESSION   DATIKR010000494 DATIKR010000000
VERSION     DATIKR010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128005"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VLL76_07685"
     CDS             <1..384
                     /locus_tag="VLL76_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HSV29423.1"
                     /translation="KGQDIVITTALIPGRPAPVLITKEMVESMKPGSVIVDLAVERGG
                     NCPLSRPDEVVVHNGVSIVGTVNLAGKLAGNASPLFAKNLANFLDLMVQKDGSFKIDE
                     ADECIKGTMIAKGGELVHAMFTGAK"
     gene            384..701
                     /locus_tag="VLL76_07690"
     CDS             384..701
                     /locus_tag="VLL76_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HSV29424.1"
                     /translation="MEQIAHSVDPFISLFGIFVLAVFVGYYVVWNVTPALHTPLMSVT
                     NAISSVIVVGALLAVGVGALASGSVVAMIFGFLALILASVNIFGGFMVTSRMLAMYKK
                     KDK"
     gene            705..>1704
                     /locus_tag="VLL76_07695"
     CDS             705..>1704
                     /locus_tag="VLL76_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HSV29425.1"
                     /translation="MSANLAALLYLVSGALFIMALRGLSSPATSRMGNIYGMVGMTIA
                     MLTTLATMHLSPMVLILTAAGLAIGGGIGAYAAKNIAMTAMPQLVAAFHSLVGLAAVF
                     VAAAAFYAPDAFHIVQDGLIMPLSRIEMSLGAAIGAITFTGSIIAFLKLDGRMSGAPI
                     LLPARHVINIALGAALLLCIALFYANPSWIWFWLFILISLALGFLLIIPIGGADMPVV
                     VSMLNSYSGWAAAGIGFTLHNTALIITGALVGSSGAILSYIMCKGMNRSFISVILGGF
                     GGETAGPAAGKETRNVKQGSAEDAAYIMQNAGKVIVVPGYGMAVAQAQHALREMADL"
BASE COUNT          257 a          576 c          523 g          348 t
ORIGIN      
        1 aagggtcagg acatcgtcat taccacggca cttattccgg gccgcccggc gccggtactg
       61 atcaccaagg aaatggtcga gtcgatgaag cccggttcgg tgatcgtcga tctggcggtc
      121 gagcgcggcg gcaactgccc gctgtcgcgg cccgacgaag tcgtcgtcca caacggcgtg
      181 tcgatcgtcg gtaccgtcaa cctcgccggc aagctggcgg gcaatgcctc gccgctcttt
      241 gccaagaacc tcgccaactt cctcgacctc atggtccaga aggatggcag cttcaagatc
      301 gacgaggccg acgaatgcat caagggcacc atgatcgcca agggcggcga gctggtgcat
      361 gccatgttca cgggagcgaa gtgatggaac agatcgccca ttcggttgac cccttcatct
      421 cgctgttcgg catcttcgtg ctggccgtct tcgtcggcta ctacgtggtc tggaacgtca
      481 ccccggcatt gcatacgccg ctgatgtcgg tgaccaacgc catctcgtcg gtcatcgtgg
      541 tcggcgccct gctggcggtg ggcgtcggcg cgctggcctc gggctcggtc gttgccatga
      601 tcttcggctt cctcgccctg atcctggcct cggtcaacat cttcggcggc ttcatggtca
      661 cgagccgcat gctcgccatg tacaagaaga aggacaagta ggcgatgtcg gcgaatctcg
      721 cggcccttct ctatctggtt tccggcgcgc tcttcatcat ggcgctgcgc gggctttcct
      781 cgcctgccac ctcgcgcatg ggcaacatct acggcatggt cggcatgacc atcgccatgc
      841 tgacgacgct ggcgacgatg cacctgtcgc ccatggtcct gatcctgacg gccgctggcc
      901 tggcgatcgg cggcggcatc ggcgcctatg ccgccaagaa catcgccatg acggccatgc
      961 cgcagctggt cgccgccttc cattcgcttg tcggtctcgc ggcggtcttc gtcgcggcgg
     1021 cggccttcta tgcgcccgat gccttccaca tcgtgcagga cgggctgatc atgccgctga
     1081 gccgcatcga gatgtcgctc ggcgcggcca tcggcgccat taccttcacc ggttcgatca
     1141 tcgccttcct caagcttgac ggccgcatgt ccggcgcgcc gatcctgctg ccggcgcgtc
     1201 acgtgatcaa catcgcgctg ggcgctgcgc tccttctctg cattgcgctc ttctacgcga
     1261 acccaagctg gatctggttc tggctcttca tcctgatcag tttggcgctg ggcttcctgc
     1321 tcatcatccc gatcggcggc gccgacatgc cggtggtcgt gtcgatgctg aattcctatt
     1381 cgggctgggc cgccgccggc atcggcttca ccctgcacaa caccgcgctc atcatcaccg
     1441 gggcgctcgt cggttcgtcg ggcgcgatcc tctcctacat catgtgcaag ggcatgaacc
     1501 gttcgttcat ctccgtcatt ctcggcggct tcggcggcga gacggcgggg cccgccgccg
     1561 gcaaggagac gcgcaacgtc aagcagggtt cggcggagga cgccgcctat atcatgcaga
     1621 acgccggcaa ggtgatcgtc gtgcccggct acggcatggc ggtggcccag gcgcagcacg
     1681 ccctgcgcga gatggccgat ctcc
//
LOCUS       DATIKR010000495         2864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_92144, whole genome shotgun sequence.
ACCESSION   DATIKR010000495 DATIKR010000000
VERSION     DATIKR010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92144"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="VLL76_07700"
     CDS             complement(<1..804)
                     /locus_tag="VLL76_07700"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010508783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HSV29426.1"
                     /translation="MPHNRTVSRPIVLGVVGDSASGKTTLASGIATVLGPDRVTVLCT
                     DDYHRYSRAERIKLGVTALDPRANYMDILEQHLTLLRDGKPILKPVYDHAKGTLDKPE
                     YVEPREYVIVEGLLGYHSRTLRDCYDVKVYVDPEESLRIKWKMARDCAKRGYTPDLVM
                     RSLEKRQYDSVNFIQPQRTFADMVVRFMPPETRPEESGARLNVRHTLRPTLPHPDLSP
                     VLDAGGKSGFRLALARDVDGKPVDVLDISGDIDAKRAKAVEDLLWSLIPE"
     gene            complement(816..1790)
                     /gene="glpX"
                     /locus_tag="VLL76_07705"
     CDS             complement(816..1790)
                     /gene="glpX"
                     /locus_tag="VLL76_07705"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HSV29427.1"
                     /translation="MGELRDVRADQSLCAYDLRKVTEAAARAAYAWIGRGDKSQSDAA
                     AITAMTAELEALGLDGQILIGEGPRSETSQLFHGQRFGDPGRLPNWDIAVDPVEGTSF
                     LAKGMTNAMACIAVAPHGSLFDPGPAFYMEKFAAPPAAKGKIDPAAPVEEKLRVLSVC
                     LDKAVEDLTVYVLEKPRHRELVARIHDTGARVALYPAGDVAGALMAAIPGSGIDALMG
                     SGGAPEGMLSAVAIRVMGGEYMARIDPQLATERRAVVEAGMDMERWWSLEELVRSDAA
                     MFCATGITTGLLFEGIERAAGFEKTQTLMVGGGAGPRQLLTTWHPRAA"
     gene            complement(1943..2479)
                     /locus_tag="VLL76_07710"
     CDS             complement(1943..2479)
                     /locus_tag="VLL76_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HSV29428.1"
                     /translation="MTSETYDPVAKTLHWLMAVLIVGLWLVGLVMEGLPKGDLRAQVF
                     GIHKAFGVITMALVTLRLAWRMGRGAPSLPATMGRGEQWMAIAAHGALYALMVLLPCS
                     GIIMSQSGGRDVAVFGYVIPMVVGKDEGLHEFMEEAHAILAWALAAIFVGHVAAALRH
                     HLVLKDAVLRRMLPTLGR"
     gene            complement(2565..>2864)
                     /locus_tag="VLL76_07715"
     CDS             complement(2565..>2864)
                     /locus_tag="VLL76_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29429.1"
                     /translation="KREPPEQLIDTIQAVAAGRMVFPFIDVSSLASDPLAGLTPRERE
                     LLAALAGGLTNQQMASQLDISLNTVKFHLKNLYDKLGVGNRAQAVAFYLKGRESR"
BASE COUNT          485 a          953 c          954 g          472 t
ORIGIN      
        1 ctctgggatc aggctccaca gaaggtcctc caccgccttg gcgcgcttgg cgtcgatgtc
       61 gccggaaata tccagcacgt cgaccggctt gccgtccacg tcgcgggcga gcgcgagacg
      121 gaagccgctc ttgccgccgg cgtcgagcac cggcgacaaa tcgggatggg gcagcgtcgg
      181 ccgcagggta tgccgcacgt tcaaccgggc tccgctttcc tccggccggg tttccggcgg
      241 catgaaccgc accaccatgt cggcgaaggt gcgctggggc tggatgaaat tgacgctgtc
      301 atactgtcgc ttctccagcg accgcatcac caaatcgggg gtatagccgc gcttggcgca
      361 atcgcgcgcc atcttccact tgatgcgcag gctttcctca ggatcgacat agaccttgac
      421 gtcgtagcag tcgcgcaggg tgcggctgtg atagcccagc aggccctcga cgatgacgta
      481 ttcgcgcggc tcgacgtatt ccggcttgtc cagcgtgccc ttggcatggt cgtagaccgg
      541 cttgaggatc ggcttgccgt cgcgcagcag ggtcaggtgc tgttcgagga tgtccatgta
      601 attggcgcgc gggtccagcg cggtgacgcc cagcttgatg cgctcggccc ggctgtagcg
      661 gtgatagtcg tcggtgcaca gcacggtgac gcggtccggc cccagcacgg tggcgatgcc
      721 ggacgccagc gtggtcttgc ccgacgcgga atcgcccacg acccccaaaa cgatcggacg
      781 gctgacggtg cggttgtggg gcattccgaa atccctcatg ccgctcgggg gtgccaggtg
      841 gtcagcaact ggcgcgggcc ggcgccgccg cccaccatca gcgtctgggt cttttcgaag
      901 ccggcggcgc gctcgatgcc ttcgaacagc aggccggtgg tgatgccggt ggcgcagaac
      961 atggcggcgt cggagcgcac cagttcctcc aggctccacc agcgttccat gtccatgccg
     1021 gcctcgacca cggcgcggcg ctcggtggcg agttgcgggt cgatgcgggc catgtactcg
     1081 ccgcccatca cccggatggc gacggccgac agcatgcctt cgggggcgcc gccgctgccc
     1141 atcagggcgt cgatgccgga accggggatg gcggccatca gcgcgccggc cacgtcgccg
     1201 gcgggataaa gcgcgacgcg ggcgccggtg tcgtggatgc gcgccaccag ctcgcggtgg
     1261 cgcggcttct ccagcacata gacggtaagg tcctcgaccg ccttgtccag gcagacggac
     1321 agcacgcgca gcttctcctc gaccggcgcc gccgggtcga tcttgccctt ggcggcgggc
     1381 ggggctgcga acttctccat ataaaaggct gggccgggat cgaacagcga gccgtgcggc
     1441 gccaccgcga tgcaggccat ggcgttggtc atgcccttgg ccaggaagct ggtgccctcg
     1501 accgggtcca ccgcgatgtc ccagttgggc aaacggccgg ggtcgccgaa gcgctggccg
     1561 tggaaaagct ggctggtctc ggagcggggg ccttcgccga tcaggatctg gccgtccagg
     1621 cccaaggcct ccaattcggc ggtcatggcg gtgatggcgg cggcgtcgct ttgcgacttg
     1681 tcgccacgac cgatccaggc ataggccgcg cgcgcggcag cctcggtcac cttgcgcaaa
     1741 tcatatgcgc aaagcgactg gtccgcccgg acgtcgcgca attcgcccat ctcctcgcct
     1801 tcctcccaaa ccgaaccgtg tttttcgtcg atagtggggg gtagggtcaa gaaccggaac
     1861 acccacccgg agtgcccaca aaaatcttgc ggaggggccg ggtcccgccc gagcgggcag
     1921 ggtgcctgat tttgaacggt cttcagcgcc cgagggtagg aagcatacgc cgcagaaccg
     1981 cgtccttcag gacaaggtgg tgacgcaggg cggccgccac gtgaccgacg aaaatcgccg
     2041 caagcgccca tgccaggatc gcgtgggctt cttccatgaa ctcgtgcagg ccttcgtcct
     2101 tgccgaccac catcggaatc acatatccga acacggcgac atcgcggcca cctgattgcg
     2161 acataatgat gccgctgcat ggcagcagga ccatcagggc gtacaacgcc ccatgggccg
     2221 caatcgccat ccactgctcc ccacggccca tggtcgccgg cagggacgga gcgccacggc
     2281 ccatgcgcca cgccaagcgc aacgtgacta aggccatcgt gatcacgcca aacgccttgt
     2341 ggataccgaa gacttgggcg cgaaggtcgc ccttgggcaa cccctccatc actagcccga
     2401 cgagccaaag cccgacgatg agaacggcca tcagccaatg cagggtcttc gcgacggggt
     2461 cgtaggtttc gctggtcatc agtggctccg aggtcaaatg cgcgcgtacg accgcattct
     2521 tgcacgccgt acctgaacct cgcctgaacc aaacgcgaaa cgcctcagcg cgactcgcgg
     2581 cccttgaggt agaacgccac cgcctgggca cggttgccga cgcccagctt gtcgtacagg
     2641 ttcttgaggt ggaacttgac cgtgttcagc gagatgtcga gctggctcgc catctgctgg
     2701 ttggtcaggc cgccagccag cgccgccagc aattcacgct cgcgcggggt caagccggcc
     2761 agcgggtccg aggccaggct ggagacgtcg atgaacggga acaccatgcg gccggcggcg
     2821 accgcctgga tggtgtcgat caactgctcg ggcggctcgc gctt
//
LOCUS       DATIKR010000496         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_44097, whole genome shotgun sequence.
ACCESSION   DATIKR010000496 DATIKR010000000
VERSION     DATIKR010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44097"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VLL76_07720"
     CDS             <1..237
                     /locus_tag="VLL76_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007679766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family metal-binding protein"
                     /protein_id="HSV29430.1"
                     /translation="GGGADDETGSVEYVARFKIRGQAHAHHELATFRKEDGRWLYVDG
                     EVNPKTAPRQVAKVGRNDPCPCGSGQKYKKCCGA"
     gene            222..1013
                     /locus_tag="VLL76_07725"
     CDS             222..1013
                     /locus_tag="VLL76_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSV29431.1"
                     /translation="MLRGLAGMERHFKCTACGKCCFGWLPLTLDDALAHAGRFPLGMV
                     WTPLRQGHKAFKTTARLGATITLRDRRQLALRLVPTSYIPPSLACPELGADNLCGIQE
                     SKPSRCRAMPFFPYVDEADQAPMLVPRKGWQCDVSEAAPVVYRDKAILDRIDFDREAA
                     QLKAQAPVLRAYAEALVPTVPGLLDALVKSAAKPVGGDVLLSFATLLPRLDGVDVGGI
                     ARAQLPVLHRHAELTADRPELVEYHRRYREWIADMERLSRRHPPK"
     gene            1027..>1641
                     /locus_tag="VLL76_07730"
     CDS             1027..>1641
                     /locus_tag="VLL76_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29432.1"
                     /translation="MDLVLLPGLLNDERLWAHQRRALADLADVTVADLTQDDSLAGMA
                     RRVLDSAPARFALAGLSMGGYVAMEILRQAPERVERLALLDTTARPDLPEQTDRRRDA
                     VEVARSGGFAKIMPTMLPMLVHPDHMALERVGGLAKDMALAVGPDAFIRQQNAIMHRP
                     DSRPSLSRIDCPTLVLCGRDDAVTPLDRHEEMADLIPGARLVVIE"
BASE COUNT          251 a          586 c          569 g          235 t
ORIGIN      
        1 ggcggcggcg ccgacgatga gaccggcagc gtggaatacg tcgcccgctt caagatccgc
       61 ggccaggccc acgcccatca cgaactggcg acgttccgca aggaggacgg ccgctggctt
      121 tacgtggacg gcgaggtcaa ccccaagacg gcgccgcgac aggtcgccaa ggtcgggcgc
      181 aacgacccgt gcccgtgcgg gtcgggccag aaatacaaga agtgctgcgg ggcctagccg
      241 gcatggagcg gcacttcaaa tgcaccgcct gcggcaagtg ctgcttcggc tggctgcctt
      301 tgaccctcga cgacgccctg gcccacgccg gacgcttccc gctcggcatg gtgtggacgc
      361 cgctgcgcca gggccacaag gcgttcaaga cgacggcccg gctgggcgcc accatcaccc
      421 tgcgcgaccg gcggcaattg gctttgcggc tggtgcccac gtcctatatt ccgccatcgc
      481 tggcctgccc ggaactgggc gccgacaatc tgtgcggcat ccaggagagc aagccgtcgc
      541 gctgccgcgc catgccgttc ttcccctatg tggacgaggc cgaccaggcg cccatgctgg
      601 tgccgcgcaa gggctggcaa tgcgacgtgt cggaagcggc gccggtggtc tatcgcgaca
      661 aagcgatcct cgaccggatc gatttcgacc gcgaggccgc ccaattgaag gcgcaggcgc
      721 cggtgctgcg ggcctatgcc gaggcgctgg tgccgaccgt gccaggcctg ctggacgccc
      781 tggtcaagag tgcggccaag ccggtgggcg gcgacgtgct gctgagtttc gccaccctgc
      841 tgccgcgcct ggacggggtc gacgtgggcg gcatcgcgcg ggcgcaattg ccggtgctgc
      901 atcgccatgc cgagctgacc gccgaccgcc cggaactggt ggagtaccat cgccgttacc
      961 gcgaatggat cgccgacatg gagcggctgt cgcgccgcca cccgccaaag tgaaggagtg
     1021 accgtcatgg atctggtcct gctgcccggc ctgttgaacg acgaacgatt gtgggcgcac
     1081 cagcgccgcg cgctggccga cctggcggac gtcaccgtcg ccgacctcac ccaggacgac
     1141 agcctggccg ggatggcgcg gcgggtcctg gattcggcgc cggcgcgctt tgccctggcc
     1201 ggcctgtcca tgggcggcta cgtcgccatg gagatcctgc gccaggcgcc cgagcgggtg
     1261 gaacggctgg ccttgctcga caccaccgcg cgccccgact tgccggagca gaccgatcgc
     1321 cgcagggatg ccgtcgaggt cgcccgcagc ggcggcttcg ccaagatcat gccgaccatg
     1381 ctgcccatgc tggtccatcc cgaccacatg gcgctggaac gcgtcggcgg cctggccaag
     1441 gacatggcgc tggcggtcgg ccccgacgcc ttcatccgcc agcagaacgc catcatgcac
     1501 cgccccgact cgcggcccag cctcagccgc atcgactgcc cgacgctggt gctgtgcggc
     1561 cgcgacgacg cggtgacgcc gctggaccgc cacgaggaga tggccgacct gattcccggc
     1621 gcccgcctgg tcgtcatcga g
//
LOCUS       DATIKR010000497         3257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_103897, whole genome shotgun sequence.
ACCESSION   DATIKR010000497 DATIKR010000000
VERSION     DATIKR010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3257
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103897"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..451)
                     /locus_tag="VLL76_07735"
     CDS             complement(80..451)
                     /locus_tag="VLL76_07735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29433.1"
                     /translation="MSRILIVEDTRLMRESLVDVLAAAGHEVTTADNGVQACETVAAG
                     AVFDVIITDIIMPEMDGIQAILELQTLQPGARIIAISGGSARMEKAQGLETAKRLGAV
                     AVLEKPFEVDALLSAVDAALG"
     gene            complement(487..2868)
                     /locus_tag="VLL76_07740"
     CDS             complement(487..2868)
                     /locus_tag="VLL76_07740"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV29434.1"
                     /translation="MSHQSSVPQPGELFPPRLVEVLADLSCVVFRREMSPTGDISYPY
                     LSDNVAAIFGYAPADMTVSSKGALNALHWADRDAHVAAILRSAVTMGRCLEAFRVVTA
                     DGETRWLRGSSSPMRLDDGRVAWEGAWIDISPWMRAEHQFQTVMDHAEDSILTLDAAN
                     GIDWANAAAERLFGWTLDEMLGRCLADLLDAPCKGSGPCSLAACQPADVIQCFPRGTQ
                     EVTARHKDGSSFPFEMTVSEVRSDGRLSLIVIGRDITRRKATELMLEETERRLRSIAS
                     NLPGVVFQRVRDPDGSFAYPYVSEGIVEILGCDATRIVFDSRLMFDAMVAEDRERLLD
                     ALRISAETLTPVREDVRVHGPGGRIRWLRGQSRPRRRDESIVWDGLLLDVTEEVEERI
                     KAEKAVRESEERFRLAFNAAALGIVLTTLDGTILQANPAFHAMCGLDSADLRGQSLLR
                     FVERDHLPEPADMPLPGDSVCFVYAPHLPDGEERHWRITGTTFAATPNATAPSLLLLI
                     EDVTLITRAAAERRQLELTLTEGQKLEALGRLAGGVAHELNNMLGPILMAAEMLKRTA
                     QLDDRNHERAQRIIDAAKHSGDIVRNVLAYCRKEQKTLGRLDIVPVFTQFASLAASIL
                     PPTVRVETRIEVATAEVTGDAGQITQVLLNLVNNARDAMDGKGVLGLTLRPLAPGALT
                     PPRSHAGRLRPADGHDRHTLVNPLAALDPGKSYVEITIADTGHGMTPETVAKIFDPFF
                     TTKPVGQGTGLGLSVVQGIIKAMGGAVTVESAIGGGTSFRIVLPRASLPADTI"
     gene            2970..>3257
                     /locus_tag="VLL76_07745"
     CDS             2970..>3257
                     /locus_tag="VLL76_07745"
                     /inference="COORDINATES: protein motif:HMM:NF020704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HSV29435.1"
                     /translation="MSGLGKGAHIVVIGNEKGGSGKTTVAMHLACGLLRMGFKVGCID
                     LDYRQQSLARYIANRTAWVERTRVPLPMPRFGVVHPSPHELKSQAQAEERAA"
BASE COUNT          499 a         1072 c         1165 g          521 t
ORIGIN      
        1 cagacccgca agcggatcga aggctggctg gaaaagctgc cgcggccggg gcggctgggc
       61 ggcttgatgc gctgaggcgt cagcctaaag ccgcgtccac cgcactcagc agggcgtcga
      121 cctcgaacgg cttttccagc acggcgacgg cgcccaggcg cttggcggtc tcaaggccct
      181 gggccttttc catgcgggcg ctgccccccg agatggcgat gatgcgggcg cctggctgca
      241 gggtctgcag ctccaggatg gcctggattc cgtccatctc gggcatgatg atgtcggtga
      301 tgatgacgtc gaacacggcg ccggcggcga ccgtctcgca ggcctgcacg ccgttgtcgg
      361 cggtggtgac ctcgtggccg gcggcggcca gtacgtcgac gagcgattcc cgcatcaatc
      421 gggtgtcttc gacgatcagg attcggctca tgggtccccc tccagaacac acttcgactt
      481 gataacttag atcgtatcgg ccggcaagga cgcgcgcggc aggacgatac ggaacgaggt
      541 gccgccgccg atggcgcttt cgaccgtcac cgcgccgccc atggccttga tgatgccttg
      601 caccaccgac aggcccaggc cggtgccctg gccgaccggc ttggtggtga agaaggggtc
      661 gaagatcttg gcgacggttt ccggcgtcat gccgtggccg gtgtcggcga tggtgatctc
      721 gacatagctt ttgcccgggt cgagggccgc aagtggattg accagcgtgt ggcggtcgtg
      781 gccgtcggcc gggcgaaggc gaccggcgtg ggaacggggc ggggtcaggg cgccgggagc
      841 cagcggccgc agcgtcaggc ccagcacgcc cttgccgtcc atggcgtcgc gggcgttgtt
      901 gaccaggttc agcagtacct gggtgatctg gccggcatcg ccggtcacct cggccgtggc
      961 gacctcgatg cgggtctcga ccctgaccgt gggcggcagg atcgaggcgg ccaggctggc
     1021 gaactgggtg aacaccggca cgatgtccaa ccggcccagc gtcttctgct ccttgcggca
     1081 ataggccagc acgttgcgca cgatgtcgcc gctgtgcttg gcggcgtcga tgatgcgttg
     1141 ggcgcgctcg tggttcctgt cgtccaattg ggcggtgcgc ttcaacatct cggccgccat
     1201 caggatcggc ccgagcatgt tgttgagttc gtgcgccacg ccgccggcca accggcccag
     1261 cgcctccagc ttctggccct cggtcagcgt cagctccaac tggcggcgct cggcggcggc
     1321 gcgggtgatc agggtgacgt cctcgatcag cagcagcagc gacggcgcgg tggcgttggg
     1381 cgtggcggcg aaggtggtgc cggtgatgcg ccaatgccgt tcctcgccat cgggcagatg
     1441 cggcgcgtag acgaagcaga cggaatcgcc cggcagcggc atgtccgccg gctcgggcag
     1501 gtggtcgcgt tcgacgaagc gcagcaggct ttgcccgcga aggtcggcgc tgtcgaggcc
     1561 gcacatggca tgaaacgcgg ggttggcttg caggatggtg ccgtccaggg tcgtcagcac
     1621 gatgcccagg gccgccgcgt tgaaagccag gcggaaccgc tcctcgcttt cgcgcacggc
     1681 cttttccgcc ttgatgcgtt cctcgacctc ctcggtgacg tccagcagca ggccgtccca
     1741 cacgatggac tcgtcgcgcc ggcgcgggcg cgactggccg cgcagccagc ggatgcggcc
     1801 gccggggccg tggacgcgca catcctcgcg caccggcgtc agggtctcgg ccgagatgcg
     1861 aagggcgtcg agcagacgct cgcggtcctc ggcgaccatg gcgtcgaaca tcagccggct
     1921 gtcgaacacg atgcgcgtgg cgtcgcagcc caggatctcg acgatgccct cggacacata
     1981 agggtaggcg aagctgccgt cggggtcgcg cacgcgctgg aacacaacgc cgggcaggtt
     2041 cgaggcgatc gagcgcagcc gccgctcggt ctcctccagc atcagttcgg tggccttgcg
     2101 ccgcgtgatg tcgcggccga tgacgatcag cgacaggcgg ccatcggacc gcacctcgga
     2161 caccgtcatc tcgaacggga agctgctgcc gtccttgtgc cgcgcggtga cttcctgggt
     2221 gccgcgcggg aagcactgga tgacgtcggc cggctggcac gcggccaggc tgcacggccc
     2281 cgagcccttg catggggcgt ccaacaggtc ggccaggcag cggcccagca tttcgtccag
     2341 cgtccagccg aacaggcgtt cggcggcggc attggcccag tcgatcccgt tcgcggcatc
     2401 cagggtcagg atcgaatcct cggcgtggtc catcaccgtc tggaactggt gctcggcccg
     2461 catccacggc gaaatgtcga tccaggcgcc ttcccacgcc acccgcccgt cgtccagccg
     2521 catgggcgag gacgagccgc gcagccagcg tgtctcgccg tcggcggtga cgacgcggaa
     2581 ggcttccagg cagcggccca tggtcacggc cgagcgcagg atcgccgcca cgtgggcgtc
     2641 gcggtcggcc caatgcagcg cgttgagcgc gcccttgctg ctgaccgtca tgtcggccgg
     2701 cgcatagccg aagatggcgg cgacgttgtc ggacagatag ggatacgaga tgtcgcccgt
     2761 cgggctcatc tcgcgccgga acaccacgca ggacaaatcc gccagcactt cgaccaggcg
     2821 cggcgggaac agctcgccgg gctggggaac tgaggactgg tggctcatca acggcggtct
     2881 cgcgcgatgg agggatcgac ctggacggcg gatagtgtag catgctgccc gcacggccgg
     2941 taagccggcc cgcaaagtac ggagctttca tgtctgggtt gggcaagggc gcccatattg
     3001 ttgtgatcgg caacgaaaag ggcgggtcgg gcaagacgac ggtggccatg cacctggctt
     3061 gcggcctgtt gcgcatgggc ttcaaggtcg gctgcatcga cctcgactac cgccagcaat
     3121 cgctggcccg ctacatcgcc aaccgcaccg cctgggtcga acgcacccgt gtgccgctgc
     3181 cgatgccgcg cttcggtgtc gtccatccgt cgccgcacga gttgaagagc caggcccagg
     3241 ccgaggaacg cgcagcc
//
LOCUS       DATIKR010000498         2230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_200842, whole genome shotgun sequence.
ACCESSION   DATIKR010000498 DATIKR010000000
VERSION     DATIKR010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200842"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..996)
                     /locus_tag="VLL76_07750"
     CDS             complement(<1..996)
                     /locus_tag="VLL76_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HSV29436.1"
                     /translation="MAETRTIKVEALARVEGEGSLSVKIRDGKVKDLKFGIFEPPRFF
                     EAFLRGRDYREVPDITARICGICPVAYLMGASQAMEDALGIKVTKPIRDLRRLVYCGE
                     WIESHALHVYMLHAPDFLGLSDALELAKVDRSLVEKALRLKKVGNEILEVIGGRAIHP
                     VGLRVGGFYKAPSKKQVRALEENLKWAVETSIATVKLVGGFAFPEVEQDYNFMALRHP
                     DEYAIHEGRLVTSKGLDIPVSQFLDHVEEEHVPWSNALHGFAKDGSHHHVGPLARYNL
                     NYDKLSKTAQAAAKDSGLGKVVRNPFKSIVIRAVELVQVCEDALKIVQNYQEPDKA"
     gene            complement(989..1765)
                     /locus_tag="VLL76_07755"
     CDS             complement(989..1765)
                     /locus_tag="VLL76_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002629765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HSV29437.1"
                     /translation="MADRKKPKLAVWKFSSCDGCQLTLLDCEDELLAITEEVRISYFL
                     EATRKVEKGPYDVSLVEGSITTPHDIKAIREVRKMSKTLITIGACATAGGIQALRNFK
                     NVKEFIRCVYAHPEYIDTLTTSTAVSDHVMVDFELRGCPINKYQLLEVLNAALNGRKP
                     NIPKHSECMECKQNGIVCRMVAAGTPCMGPVTQAGCGTLCPGKDRGCYGCFGPMETPN
                     TAALAAQMKALGTSDRDVKRMFSTFNANAEAFRKESESHG"
     gene            complement(1768..>2230)
                     /locus_tag="VLL76_07760"
     CDS             complement(1768..>2230)
                     /locus_tag="VLL76_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014068047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ni/Fe hydrogenase subunit gamma"
                     /protein_id="HSV29438.1"
                     /translation="LRPAIYQAMANRERFGRVVVLYGARTPEDILFKKEVERWRGRFD
                     MDVSVTVDRATGKWSGNVGVVTKLVGRGGFDPLHTTAFVCGPEVMMRYVAAELEKKGV
                     NTANIWVSMERNMKCGCGLCGHCQWGPHFVCKDGPVFRYDRIADMFSVREL"
BASE COUNT          359 a          712 c          736 g          423 t
ORIGIN      
        1 cgccttgtcc ggctcctggt agttctggac gatcttcagg gcgtcctcgc acacctgcac
       61 caattcgacg gcgcggatga cgatgctctt gaaggggttg cgcacgacct tgccgaggcc
      121 ggaatccttg gccgccgcct gggcggtctt cgacagcttg tcgtaattga ggttgtagcg
      181 cgccagcggg ccgacatggt ggtggctgcc gtccttggcg aagccgtgca gggcgttgga
      241 ccacggcacg tgttcttcct cgacatggtc gaggaattgc gacaccggga tgtccagccc
      301 cttggacgtc accaaccggc cttcatggat ggcgtattcg tcggggtggc gcagggccat
      361 gaaattgtag tcctgctcga cctcggggaa ggcgaagccg ccgaccagct tgacggtggc
      421 gatggaggtc tccaccgccc atttcagatt ctcctccagc gcccgcacct gcttcttgct
      481 gggcgccttg tagaagccgc cgacccgcag cccgaccgga tggatggcgc ggccgccgat
      541 gacctccagg atctcgttgc cgaccttctt gagccgcaac gccttttcca ccagcgagcg
      601 gtcgaccttc gccagttcga gcgcgtcgga caggcccagg aagtcggggg cgtgcagcat
      661 gtagacgtgc agcgcgtggc tttcgatcca ctcgccgcaa tagaccagcc ggcgcaggtc
      721 gcggatgggc ttggtgacct tgatgcccag cgcgtcttcc atggcctggc tggcgcccat
      781 cagataggcc accgggcaga tgccacagat gcgggcggtg atgtcgggca cttcgcgata
      841 atcgcggccg cgcaggaacg cctcgaagaa gcgcggcggc tcgaagatac cgaatttcag
      901 atccttgacc ttgccgtcgc ggatcttgac ggacagggag ccttcgccct cgacgcgggc
      961 gagcgcctcg accttgatgg tgcgggtctc agccatggga ttcgctctcc ttgcggaacg
     1021 cctcggcatt ggcgttgaag gtgctgaaca tgcgcttgac gtcgcggtcc gacgtgccca
     1081 gcgccttcat ctgcgccgcc agggccgccg tgttgggcgt ctccatcggg ccgaagcagc
     1141 catagcagcc gcgatccttg cccgggcaca gggtgccgca gccggcctgg gtcaccggcc
     1201 ccatgcaggg cgtgccggcc gccaccatgc ggcagacgat gccgttctgc ttgcactcca
     1261 tgcattcgga atgcttcggg atgttgggct tgcggccgtt cagggcggcg ttgagcacct
     1321 caagcaactg gtacttgttg atcgggcagc cgcgcagctc gaaatccacc atcacgtggt
     1381 cggacaccgc cgtcgaggtg gtcagggtgt cgatgtattc cgggtgggca taaacgcagc
     1441 ggatgaattc cttgacgttc ttgaagttgc gcagggcctg gatgccgccg gcggtggcgc
     1501 aggcgccgat ggtgatcagc gtcttcgaca tcttgcgcac ctcgcggatc gccttgatgt
     1561 cgtgcggcgt ggtgatcgat ccttcgacca gcgagacgtc gtaagggccc ttctcgacct
     1621 tgcgggtggc ctccaggaag tagctgatgc gcacttcctc ggtgatcgcc agcaattcgt
     1681 cctcgcaatc gagcagggtg agctggcagc cgtcgcagga cgagaacttc cagacggcga
     1741 gcttgggctt cttgcggtca gccatggcta aagctccctg accgagaaca tgtcggcgat
     1801 gcggtcgtag cggaacacgg ggccgtcctt gcacacgaaa tgcggccccc attggcaatg
     1861 gccgcacagg ccgcagccgc atttcatgtt gcgctccatg gacacccaga tgttggcggt
     1921 gttcacgccc ttcttctcca actcggcggc gacgtagcgc atcatcacct cggggccgca
     1981 gacgaaggcg gtggtgtgca gcgggtcgaa gccgccgcgc cccaccagct tggtgacgac
     2041 gccgacattg ccgctccact tgccggttgc gcgatcgacg gtgaccgaca catccatgtc
     2101 gaagcggccg cgccagcgct cgacctcctt cttgaacagg atgtcctcgg gggtgcgggc
     2161 gccgtacagc accaccaccc ggccgaagcg ctcgcggttg gccatggcct ggtagatggc
     2221 ggggcgcaac
//
LOCUS       DATIKR010000499         4136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_103933, whole genome shotgun sequence.
ACCESSION   DATIKR010000499 DATIKR010000000
VERSION     DATIKR010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103933"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..1278
                     /locus_tag="VLL76_07765"
     CDS             151..1278
                     /locus_tag="VLL76_07765"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSV29439.1"
                     /translation="MRQISAEVPAAVAAYHRLISEHVAGLSIEEQIRPRGERRRLETV
                     AELVVAYLAYAQGEYAKNGAPTSEVADVRAACSYLTAEYADLPLAELGPLKLRAVRAA
                     MIRRGLARSTINAYVHRLQAMACWAGEHELADPAWPRGLACVRALRQGRGGRETPQRQ
                     PVERAAVEAVLARATAPVAAMIELQWHAGLRPGEAVGLRRSALHRGGEVWFASVADHK
                     SAHLGEGHVRIVPLGPAAQALLTPWIAAAEAAGRDWLFSPAVAVAELRERQRAGRIAR
                     GGGGNRKRRRPGRQRRVPAERYSVASYRRCIARACQAAGIPAWSPHRLRHSFATRVLE
                     VCGSSELDALAAALGHRQVNTTLLYAHLLRSKGADLARRVG"
     gene            complement(1650..>4136)
                     /locus_tag="VLL76_07770"
     CDS             complement(1650..>4136)
                     /locus_tag="VLL76_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29440.1"
                     /translation="GEPIWCCGSMTVAKGWTDAEEAAYVAAAEAEDLADAASEKWSNV
                     YRTFVPLSATSPFGTPLPRCTDSGTLAYDGWLYPVGKTLTRQTPLRQDVDYSENLPGT
                     ARAGVPRDLRPPAVYAIPNAPDEETGTIGYVPIDRFSAIEEWGLGGCHVSVLDDRVGI
                     RLAGAFAHAAAGEWEADTWSEPETDWTTLQVCAAVRCDDRLRIVEAVAGTAGQLPRRV
                     VIDVPGAELWVVLAGTPLDTADGNIVSAAENTVIRDDTDRLKPVAALAKAWYGRQRNA
                     CRIAYRQIATALAPGDILTTVTVGGGSADVNCPISGVTWDFAACRTEIETDFAELDFA
                     AIAAVHHPHGAYSAVDGWNDSGRADAAMPNSPVRLAAAGGVKPQRPTRLGKYIASPAF
                     VDGDETVWLAPCDDDGTVTDEPAVEVYLIAPPAGQTRTPRLTFTGSGTYPYFLTEEGR
                     AVLGNAEMPPHLVLVEGGTDVNGIDPVADGQGWISKRDDDTLEHRDPRPEDNIIFRSC
                     SVTGWAFDQRGHLTGWWENQYIEGEWQEVWTSPWGYDEPEELVLDEFTVTGAAEGAQC
                     TTSPTWTGGGNPTNRRLVVEWGDGSSNTYEEAVSGAARTHTYTHCTEAVSHDYPVTIR
                     TGGKHKHATCTVTNIAPTDVSGTLADNTIGVGEEAVMTVTWANAYATDTHTVHINWGD
                     GITTDTPNATSPCVVRHTYVAPYTGAVLVSVEDDDGAVVSDATQPTITVTGPPIEVDA
                     GIDEIIDVDESILHEITWTGGYGAFQVRAWADGIDPEDGFVENGVSSPYNLAIGPSPA
                     PMGPVTIHVRITDSSGTQDEDTFTLTVVEP"
BASE COUNT          580 a         1354 c         1498 g          704 t
ORIGIN      
        1 cgatgttgta cgtgtatttc ttcatagcct accgctttcg accgaattct accgaacgct
       61 ctatacaagt caatcggaaa cggtcggaaa ttgtaaaaaa tcttttcttt acctgacggg
      121 ggagggttgg aagataaggc aatggtagaa atgagacaga tttcggccga ggtaccggcg
      181 gcggtggcgg cgtaccaccg gctgatcagc gagcacgtcg ccgggctgtc gattgaagag
      241 caaatccgcc cccgcggcga gcggcgccgg ctggagaccg tcgccgagct ggtggtggcg
      301 tacctggcgt acgcacaggg cgagtacgcc aagaatggcg cgcccacgtc ggaggtcgcc
      361 gacgtgcggg cggcgtgctc gtatctcacg gcagagtacg ccgatctccc gctggcggag
      421 ctggggccgc tgaagctgcg cgccgtgcgg gcggcgatga tccgccgagg cctggcccgc
      481 tccaccatca acgcctacgt ccaccgcctc caggcgatgg cgtgctgggc gggcgagcac
      541 gagttggcgg atcccgcctg gccgcgaggg ctggcgtgcg tgcgggcgct gcgccagggg
      601 cgcggcggca gagagactcc ccagcggcag ccggtggagc gggcggccgt cgaggcggtc
      661 ctggcccgcg caaccgcccc cgtggcggcg atgatcgagt tgcagtggca cgcggggctc
      721 cgccccggcg aggcggtggg gctgcgccgc tcggccctgc accgcggcgg ggaggtctgg
      781 ttcgcgtccg tggcggatca caagtcggcc cacctgggcg aggggcacgt gcggatcgtc
      841 ccgctggggc ccgccgccca ggcgctgctg acgccctgga tcgcggcggc ggaggccgcg
      901 gggcgggact ggctgttttc cccggccgtc gccgtggcgg agctccgcga acgccagcgg
      961 gccgggcgca tcgcccgcgg cggcggtggc aaccgcaagc ggcggcggcc gggccgccag
     1021 cggagagtcc cggccgagcg gtacagcgtg gcgagctacc gccgctgcat cgcccgggcg
     1081 tgccaggcgg cggggatccc ggcatggagc ccccaccggc tgcggcatag cttcgccacg
     1141 cgggtcctgg aggtctgcgg ttccagtgaa ctggatgccc tggcggccgc cctgggccat
     1201 cggcaggtga atacgacgct gctgtatgcg catctgttac ggagcaaggg ggcggatttg
     1261 gcccgacgcg tggggtgacc gcagaggcac agaggccgcg gagggggcgg ggaggttcgc
     1321 gggttggctg agcatgcggc aatgctcgca tttgttcggc gtgcccgtgt cgttcattgg
     1381 ggcgatgtag aacgtcgggt tcgccactcc gctctcccgc tccagcgtgc ccatcgcgga
     1441 gcgaaggttg tcatacgcga cgcaccaggc acggcaggcg gcacacatcg cctcgattcg
     1501 ccgtcgcgct tcgtccgccg ccggtccggc cggcaactcg ccggccacgt gccaggccgc
     1561 cgccgcatgg tggcatgcac tgcgattcgc gccatacatg ctccgcacca ccacggccag
     1621 ccgctccacg gattgtcgtg tttcatcggt catggttcga ccaccgtcag cgtgaaggtg
     1681 tcctcatcct gggtccccga cgagtccgta atccgcacgt ggatagtgac cggccccatt
     1741 ggcgcgggcg atggaccgat agccaggtta tacgggctgg aaacgccgtt ctcgacaaac
     1801 ccgtcctctg ggtctatgcc gtccgcccac gcgcggacct ggaacgcacc gtatccaccg
     1861 gtccacgtga tttcgtgcaa gatcgattcg tcaacgtcaa tgatctcatc gatccccgcg
     1921 tcaacctcga tgggcggacc cgtcacggtg atcgtcggct gggtcgcgtc agaaacgacc
     1981 gcgccgtcgt catcttctac gctgaccaac acggcgcccg tgtacggggc gacgtaggta
     2041 tgccgcacca cgcacggcga tgtcgcgtta ggggtgtccg tggtaatgcc gtcgccccaa
     2101 ttgatgtgca ccgtgtgcgt gtccgtcgcg taagcgttgg cccacgtgac cgtcattacg
     2161 gcctcttcac cgacgccgat cgtgttgtcc gccagagttc cggacacgtc ggtgggggcg
     2221 atgttggtca cggtgcatgt ggcgtgcttg tgtttgccgc ccgtgcggat cgtgacgggg
     2281 tagtcgtggc tcacggcctc cgtgcaatgg gtatacgtgt gcgttcgcgc cgccccgctc
     2341 acggcctcct cgtaggtgtt acttgaacca tcgccccact ccacgaccag gcgacgattc
     2401 gtagggttgc cgccgcccgt ccacgtcggc gacgtggtgc actgcgcccc ttccgccgcc
     2461 ccggtgacgg tgaactcgtc gagcaccagt tcctccggtt cgtcgtagcc ccagggcgac
     2521 gtccatacct cctgccactc gccctcgatg tattggtttt cccaccagcc cgtcaggtgc
     2581 ccgcgctggt caaacgccca gcccgtcacg ctgcaggacc ggaagatgat gttgtcttcc
     2641 ggccgggggt cgcgatgctc cagcgtgtca tcatcgcgct tgctaatcca tccctggccg
     2701 tccgcgacgg gatcgatgcc attgacgtcg gttccgccct cgaccaggac taggtgcggc
     2761 ggcatttcgg catttcccag gaccgcgcgc ccttcttccg tcaggaaata tggataggtc
     2821 ccgcttccgg tgaacgtcag tcgcggcgta cgcgtttgcc cggcgggggg ggcgatcagg
     2881 tacacctcga cggccggctc gtcggtcacg gttccgtcgt cgtcgcatgg cgcgagccac
     2941 acggtttcgt cgccgtcaac aaacgcgggc gaggcgatgt attttccgag ccgggtgggg
     3001 cgctgcggtt tcacgccgcc cgcggcggcg aggcggacgg gggagttggg catggcggcg
     3061 tcggcgcggc cgctgtcgtt ccagccgtcg acggcggagt aggccccgtg gggatgatgc
     3121 acggcggcga tggcggcgaa gtcgagctcc gcgaagtcgg tctcgatttc ggttcggcac
     3181 gcggcgaagt cccaggtgac tccgctgatg gggcaattca cgtccgccga gccgccgccg
     3241 acggtgacgg tggtgaggat gtcgcctggg gccagggcgg tggcgatctg acggtaggcg
     3301 atccggcagg cgtttcgctg gcggccatac caggccttgg ccagggcggc gacgggtttg
     3361 agcctgtcgg tgtcgtcccg aatgacggta ttctcggcgg cggatacgat gttgccgtcg
     3421 gcggtgtcca gcggcgtgcc ggccaggacg acccagagtt cggcgccggg cacgtcgatg
     3481 accacgcggc gggggagctg gccggcggta cccgccacgg cttccacgat gcgcagccga
     3541 tcgtcgcatc gcacggcggc acaaacctgg agcgtggtcc agtcggtctc gggctcggac
     3601 caggtgtcgg cctcccattc accggcggcg gcatgggcga acgccccggc caggcggatg
     3661 ccgacgcggt cgtccaggac gctgacgtgg cagccgccca gcccccactc ttcgatggcg
     3721 ctgaagcggt cgatgggcac gtacccgatg gtgccggtct cctcgtcggg cgcgttgggg
     3781 atcgcgtaga cggcaggggg gcgcaggtct cggggcacgc cggcccgagc cgtgccgggc
     3841 aggttctcgc tgtagtcgac gtcctggcgg agcggcgtct ggcgggtgag cgttttgccg
     3901 acggggtaga gccagccgtc gtaggccagc gtcccgctgt cggtgcatcg cggcagcggc
     3961 gtcccgaagg gcgacgtcgc ggagaggggg acgaacgtgc ggtagacgtt ggaccatttt
     4021 tccgacgcgg cgtcggcgag gtcctcggcc tcggcggcgg cgacgtaggc ggcctcttcg
     4081 gcgtcggtcc agcccttggc gacggtcatc gagccgcagc accagatcgg ctcccc
//
LOCUS       DATIKR010000500         1759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_116076, whole genome shotgun sequence.
ACCESSION   DATIKR010000500 DATIKR010000000
VERSION     DATIKR010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116076"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1228
                     /locus_tag="VLL76_07775"
     CDS             <1..1228
                     /locus_tag="VLL76_07775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29441.1"
                     /translation="NEVLLRRDLSMAEMAAMLTEVRQGAGVPVTTAEIWSAWLRHPEL
                     ANAVDVLTVHILPYWDVQADDMAEVLAFTENSVKSVAQAYAHKPIFIGEVGWPSFGRA
                     RGGVAPGLVEQAEFLRGLVAMAARNGWSYNAIEGFDQPWKRRWEGAAGGYWGVLDADG
                     ALKWPLAGPVSANPSWLLQAQAAIALGVGLLFASLASAGTGRRWWLAALLAAPAAAIL
                     VQQALFSAAIVARLYEPVLALGALTASGVFAVLGLAVAAGREKWDIPNLAEAMAGRGR
                     RLGWLTLAVRVGIAALALALLFDPRHRDFHSVIVALPALVLAVAVRMRATPPERLLGV
                     LVAACGVAVAVREMNADALGWAAICLLTAWPLVMQRQHQAQRGGGGVGEGVAEGKADD
                     ADRHGDQRAKAPAEAG"
     gene            complement(1420..>1759)
                     /locus_tag="VLL76_07780"
     CDS             complement(1420..>1759)
                     /locus_tag="VLL76_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV29442.1"
                     /translation="FRGMPGAPGYCASKAAVRVWGEGLRGWLAADGIKVSVICPGFVT
                     TRMTAVNDFPMPFLMDAPRAARIMADGLARDKGRIAYPWPMYAMAWLAGALPDTLMDW
                     IARRMPAKGK"
BASE COUNT          239 a          596 c          665 g          259 t
ORIGIN      
        1 caacgaggtg ctgctgcgcc gcgacctgtc catggccgag atggcggcga tgctgaccga
       61 ggtccgccag ggcgccggcg tccccgtcac caccgccgaa atctggtctg cctggctgcg
      121 ccatcccgag ctggcgaatg ccgtcgatgt gctgaccgtg cacatcctgc cctattggga
      181 cgtccaggcc gacgacatgg ccgaggtgct ggccttcacc gagaattccg tgaaatcggt
      241 ggcccaggcc tatgcccaca agcccatctt catcggcgag gtcggctggc ccagtttcgg
      301 ccgcgcgcgc ggcggcgtgg cgccggggct ggtggagcag gcggaattcc tgcgcgggct
      361 ggtcgccatg gcggcgcgca acggctggag ctacaacgcc atcgaaggct tcgaccagcc
      421 gtggaagcgg cgctgggaag gcgccgctgg cggctattgg ggtgtactcg atgccgatgg
      481 cgccctcaaa tggcccctgg ccgggccggt ttcggccaac ccgtcatggc tgctgcaggc
      541 ccaagccgcc atcgcgctgg gcgtcggcct gttgttcgct tcgctggcct cggccggcac
      601 tgggcggcgc tggtggctgg cggcactgct ggcggctccg gcggcggcaa tactggtgca
      661 gcaggcattg ttctccgccg ccatcgtggc gcggctgtac gagccggtgc tggccctggg
      721 cgcgctgacc gcctcgggcg tgttcgcggt gctgggcctt gccgtcgcgg cggggcggga
      781 gaagtgggac atccccaacc tggccgaggc gatggcgggc agggggcggc ggttgggctg
      841 gctgaccctg gccgtgcgcg tcggcatcgc cgccctggct ctggcgctgc tgttcgaccc
      901 gcgccatcgc gatttccatt cggtcatcgt cgccctgccg gcgctggtgc tggccgtggc
      961 ggtgcgcatg cgggcgacgc cgccggaacg gttgctgggg gtgctggtgg cggcttgcgg
     1021 tgtcgcggtg gcggtgcgcg agatgaatgc cgacgcccta ggctgggctg caatctgcct
     1081 gctgaccgcg tggccgctgg tgatgcagcg ccagcaccag gcccagcgcg gcggcggggg
     1141 cgttggggaa ggcgtggccg aaggcaaggc cgacgatgcc gaccgccatg gcgaccagcg
     1201 cgccaaggcg ccagcggaag ccggctaggg cggccaaagc cgcgatcacg cccaccagcc
     1261 aatggcgtag gacggtgtcg gccagatcgg ccgggccgca ccaggcgggg gccgaggctt
     1321 ccaggcacaa gggcgccaac acttcgttct cgatcaggtc gaagcgcaag gcggcggcgg
     1381 cggcgcccag cagggcgacc aggatgacgg cacgcatggt catttcccct tggccggcat
     1441 gcgccgggcg atccagtcca tcagcgtgtc gggaagggcg cccgccagcc aggccatcgc
     1501 atacatgggc cacggatagg cgatgcggcc tttgtcacgg gccagcccgt ccgccatgat
     1561 gcgggcggcg cgcggcgcgt ccatcaggaa cggcatgggg aagtcgttga ccgccgtcat
     1621 gcgggtggtg acgaagccgg ggcagatcac cgacaccttg atgccgtccg ccgccagcca
     1681 gccgcgcaac ccctcgcccc acacccgcac ggcggccttc gaggcgcaat agcccggcgc
     1741 ccccggcatg ccgcgaaag
//
LOCUS       DATIKR010000501         1976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_128015, whole genome shotgun sequence.
ACCESSION   DATIKR010000501 DATIKR010000000
VERSION     DATIKR010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128015"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1513)
                     /gene="soxB"
                     /locus_tag="VLL76_07785"
     CDS             complement(<1..1513)
                     /gene="soxB"
                     /locus_tag="VLL76_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfohydrolase SoxB"
                     /protein_id="HSV29443.1"
                     /translation="MLTRRDFLQVAAATAVLTSGSGLARAAATQKITQDALLAFKPVG
                     QVTLLNFTDIHAQLMPLYFREPSVNLGVGANKGVVPHITGKDLLKKYGINPGTPEAYA
                     LTFEDFAALSKTYGRVGGLDRMATLVKSIRAERPANTLLIDCGDTWQGSYTSLQTKGE
                     DMVDAMNLLGVDVMVPHWEFTYGEARVKELIAKLKFPFLCSNVKDTEWDEEVFPHTAF
                     FDRGGVKVAVIGQAFPYTPVANPRYMIPKWSFGIREEEMQKRIDAAKAAGAELIVVAS
                     HNGFDVDRKMASRVKGIDVLLTGHTHDAIPAVVKVGDTLLVASGSHGKFLARLDVEVK
                     NKKVTNYAFKLMPVFSDAIRPDADMAAMIEKIRAPHKAVLERKLARTESVLYRRGNFN
                     GTFDDLICKALLEERDAQVALSPGFRWGSSLPPGADITAEDVFNQTAITYPNAYRSQM
                     TGQLLKDILEDVADNLFNPDPYYQQGGDMVRVGGMSYRIDIHKPIGSRISDMTL"
     gene            complement(1629..>1976)
                     /gene="soxA"
                     /locus_tag="VLL76_07790"
     CDS             complement(1629..>1976)
                     /gene="soxA"
                     /locus_tag="VLL76_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016669 - oxidoreductase activity, acting
                     on a sulfur group of donors, cytochrome as acceptor
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019417 - sulfur oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxA"
                     /protein_id="HSV29444.1"
                     /translation="VSVQVDGPAAPYFEAGRRFYYERRGLNDLACKHCHEDNAGGHMR
                     TELLSQGQTNGFPTYRLKWQKLGSLHKRLAGCNEEIRAEPFPLGSDEYTNLELFLAWR
                     SMGLTVEAPSVRK"
BASE COUNT          306 a          611 c          690 g          369 t
ORIGIN      
        1 ccagggtcat gtcgctgatg cggctgccga tgggcttgtg gatgtcgatg cgatagctca
       61 tgccgccgac gcgcaccatg tcaccgccct gctggtaata ggggtcgggg ttgaacaggt
      121 tgtcggcgac gtcttccagg atgtccttca gcaactgccc ggtcatctgc gagcggtagg
      181 cgttgggata ggtgatggcg gtctggttga acacgtcctc ggcggtgata tcggcgccgg
      241 gcggcagcga cgagccccag cggaagcccg gcgacagcgc gacctgggcg tcgcgttcct
      301 cgagcagcgc cttgcagatc aggtcgtcga aggtgccgtt gaagttgccg cggcgataga
      361 gcaccgattc ggtgcgggcc agcttgcgct ccagcaccgc tttgtggggg gcgcggatct
      421 tctcgatcat cgccgccatg tcggcgtcgg ggcgaatggc gtccgagaac accggcatca
      481 gcttgaaggc gtagttggtc accttcttgt tcttcacctc gacgtcgagg cgggcgagga
      541 acttgccgtg cgagcccgag gcgaccagca gggtgtcgcc caccttgacc acggccggaa
      601 tggcgtcgtg ggtgtggccg gtcagcagca cgtcgatgcc cttgacacgg ctcgccatct
      661 tgcggtcgac gtcaaagccg ttgtggctgg cgaccacgat cagctcggcg ccggcggcct
      721 tggcggcgtc gatacgcttc tgcatctcct cctcgcggat gccgaagctc cacttgggga
      781 tcatgtagcg cgggttggcg accggggtgt aggggaaggc ctggccgatc accgccacct
      841 tgacgccgcc gcgatcgaag aaggcggtgt gcgggaagac ctcctcgtcc cactcggtgt
      901 ccttgacgtt cgagcacagg aacgggaact tcagcttggc gatcaactcc ttgacgcggg
      961 cctcgccata ggtgaactcc cagtgcggca ccatcacgtc gacgcccagc aaattcatgg
     1021 cgtcgaccat gtcctcgccc ttggtctgca gcgaggtgta cgagccctgc caggtgtcgc
     1081 cgcaatcgat cagcagcgtg ttggcggggc gctcggcgcg gatggacttg accagcgtcg
     1141 ccatgcggtc gaggccgccg acgcggccgt aggtcttcga cagcgccgcg aaatcctcga
     1201 aggtcagggc ataggcttcc ggcgtgccgg ggttgatgcc gtatttcttc agcaggtcct
     1261 tgccggtgat gtgtggcacc acgcccttgt tggcgccgac gcccagattg accgacggct
     1321 cgcggaaata cagcggcatc agttgggcat ggatgtcggt gaagttgagc agcgtcacct
     1381 ggcccaccgg cttgaaggcc agcagcgcgt cctgggtgat cttctgcgta gcggcggcgc
     1441 gcgccagccc cgagccggag gtcagcacgg cggtggcggc cgccacctgc aagaagtcgc
     1501 gacgagtcag cattctgggt cgttccctgt ttttggtgcg cgccgcggtt ccgtcacccc
     1561 cgggcttggc ccgggggtct ggaaaggatg gccgggtcaa gcccggccat gacggcacag
     1621 gttttcgtct acttgcgaac cgacggcgct tccacggtca ggcccatgga gcgccaggcg
     1681 aggaacagct cgaggttcgt gtattcatcc gagcccagcg ggaacggctc ggcgcggatc
     1741 tcttcgttgc agccggcgag gcgcttgtgc agcgaaccca gcttctgcca cttcaagcga
     1801 taggtgggga agccgttggt ctggccctgc gacagcaatt cggtgcgcat gtggccgccc
     1861 gcattgtcct cgtggcagtg cttgcacgcc aggtcgttga ggccccggcg ctcgtagtag
     1921 aagcggcggc cggcctcgaa atagggggcg gcggggccgt ccacctgcac gctcac
//
LOCUS       DATIKR010000502         3243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_237172, whole genome shotgun sequence.
ACCESSION   DATIKR010000502 DATIKR010000000
VERSION     DATIKR010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237172"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1321)
                     /locus_tag="VLL76_07795"
     CDS             complement(<1..1321)
                     /locus_tag="VLL76_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsB/NhaD family transporter"
                     /protein_id="HSV29445.1"
                     /translation="MHGEAQAWVPNVLFGWNAMVVATVILVGTYAVIMSEKINRAVVA
                     LVGAGLMILVGVLNQEAAIRGVDFNTIALLTGMMIIVAITRKCGVFQFVAIWAAKKVK
                     ASPAGILFMLQIVTALFSALLDNVTTVLLVVPVTLVITEELKVKPWPYLVALIFASNI
                     GGTSTLIGDPPNILIGSATGLSFNAFVMNLAPVAFVSLVVISVIFHLMWGRRLHATAE
                     ARARVMGFNEYEAITDWRLLKQSLFVLALVIVGFIAAHSIHQEPGTIAMFGAALLMLL
                     YSMGKDSETQSHEVHHIFGEVEWVTIFFFVGLFMVVYGVEQAGLLELAAKQLVAATGG
                     DLAVTALAILWASAILSAVVDNIPFVATMIPLIKSMAPTFGGPEALEPLWWSLALGAC
                     LGGNGTLVGASANLTVAGLAERAGHPIRFLPYMKVAFGLMLITIAIAH"
     gene            complement(1321..1773)
                     /locus_tag="VLL76_07800"
     CDS             complement(1321..1773)
                     /locus_tag="VLL76_07800"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV29446.1"
                     /translation="MSSQDIISPPKAMLAKGDSLADAVKALRDNGFSPLPVVDAKDRF
                     AGVFGPRELLAVLLPRAARLGEDDMPDLSFISDSYDDIKARLGAAAKESVGKVMAPHR
                     TVHRDTPLVEMLLLLHRGDAFLPVVDESGKLVGVVTAAAVLSLIVEGV"
     gene            complement(1885..2271)
                     /locus_tag="VLL76_07805"
     CDS             complement(1885..2271)
                     /locus_tag="VLL76_07805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29447.1"
                     /translation="MTLAHAVNLPQPRRRVVVLAADEMVRDALACWLGADGADVQVAA
                     NGSEAAMLLDQGGTDALVTDRTYPAWTGLGTMQSVKQRFPGIRVVVAGARADDPFVAL
                     ARSVGADAVIPSPLRKAEVIRSLVGR"
     gene            complement(2281..>3243)
                     /gene="nhaA"
                     /locus_tag="VLL76_07810"
     CDS             complement(2281..>3243)
                     /gene="nhaA"
                     /locus_tag="VLL76_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HSV29448.1"
                     /translation="MLEGELSSPSQVMLPAVAAVGGMAVPAGIYLAFNWGDPATMRGW
                     AIPSATDIAFSLGVLSVLGRSVPGCLRVFLAALAIIDDLGAIVIIAFFYSSDLSALFL
                     QMAAGAAVVLWVLNRAGVTRLAPYMLAGLFLWVCLLKSGIHATLAGVVLGLAIPLRVS
                     DGGARAPLRRLEHSLHPWVAFAILPVFALANSGVPFAGMGIESLSGPVFLGVALGLFV
                     GKQVGVFAFSWLLIRLGLARLPAGVSWSQFYGVCILTGIGFTMSLFIGGLAFTSGEVM
                     AETRFAVLAGSVASALVGYGLLRLTARPRSWPRTEDDHMRHAAE"
BASE COUNT          613 a         1086 c         1119 g          425 t
ORIGIN      
        1 cgtgggcgat ggcgatcgtg atcagcatca ggccgaacgc caccttcatg tagggcagga
       61 agcggatcgg gtgccctgcc cgttctgcca aaccggccac cgtcaggttg gccgacgcgc
      121 ccaccagggt gccgttgccg cccaggcagg cgcccagcgc cagcgaccac cacaacggct
      181 ccagggcctc ggggccgccg aaggtggggg ccatcgactt gatcagcggg atcatggtgg
      241 cgacgaacgg gatgttgtcg accaccgccg acaggatcgc cgacgcccac aggatcgcca
      301 gcgccgtcac cgccaggtcg ccgccggtcg ccgccaccag ttgcttggcc gcgagttcca
      361 gcaggcccgc ctgctcgacg ccgtagacca ccatgaacag gccgacgaag aagaagatgg
      421 tgacccactc gacttcgccg aagatgtggt ggacttcatg gctttgggtc tcggaatcct
      481 tgcccatgct gtagagcagc atcagcagcg cggccccgaa catggcgatg gtgccgggtt
      541 cctggtggat ggaatgggcg gcgatgaagc cgacgatgac cagggccagc acgaacagcg
      601 actgcttcag caggcgccag tcggtgatcg cctcgtactc gttgaagccc atgacgcggg
      661 cgcgggcctc ggcggtggcg tgcaggcggc ggccccacat cagatggaag atgaccgata
      721 tcaccaccag gctgacgaaa gccaccggcg ccaggttcat gacgaaggcg ttgaagctga
      781 ggccggtcgc cgagccgatc aggatgttgg gcgggtcacc gatcagggtc gaggtgccgc
      841 cgatgttgga ggcgaagatc agggccacca gataaggcca cggcttgacc ttcagctctt
      901 cggtgatgac cagcgtcacc ggcactacca gcagcacggt ggtgacgttg tcgagcagcg
      961 ccgagaacaa cgccgtgacg atctgcagca tgaacaggat gccggccggg ctggccttga
     1021 ccttcttcgc cgcccagatg gcgacgaact ggaacacgcc gcatttccgg gtgatggcga
     1081 cgatgatcat catgccggtc agcagcgcga tggtgttgaa atcgacaccg cggatggccg
     1141 cttcctggtt cagcaccccg accaggatca tcaggccggc gccgaccagg gcgacaacgg
     1201 cgcggttgat cttctcgctc atgatgacgg cgtaggtgcc gaccaggatc acggtggcga
     1261 ccaccatggc gttccagccg aacagcacgt tggggaccca ggcttgcgct tcgccgtgca
     1321 tcacacgccc tccacgatca aggacagcac ggcggcggcg gtgaccacgc ccaccagctt
     1381 gccggattca tccaccaccg gcaggaaggc gtcgccgcga tgcagcagca gcagcatctc
     1441 gaccagcggg gtgtcgcggt ggacggtgcg gtggggcgcc atcaccttgc cgacgctttc
     1501 cttggccgcc gcgcccaggc gggccttgat gtcgtcgtag ctgtcgctga tgaacgacag
     1561 gtcgggcatg tcgtcctcgc ccaggcgggc ggcacgcggc agcagcacgg ccaacagctc
     1621 acgcgggccg aacacgccgg cgaagcgatc cttggcatcg accacgggca gcggagagaa
     1681 gccgttgtcg cgcagggcct tgacggcgtc ggcaaggctg tcgcccttgg cgagcattgc
     1741 cttgggcggc gaaatgatgt cctgggaact catggtgcaa tcggcgtccc atgcaaaaat
     1801 ggcgcgcggg accgttggcc ccgcccgggc ggcggagcgc agattgtgcc ctcaggcagg
     1861 gatgttacct atacgcggaa atacctaccg cccgaccaag gacctgatta cctccgcctt
     1921 tcgcaatggt gaagggatga cggcgtcggc gccgaccgag cgcgccaggg cgacgaaggg
     1981 gtcgtcggca cgggcgccgg ccaccaccac gcggatgccg ggaaagcgct gcttgaccga
     2041 ctgcatggtg cccaggcccg tccaggccgg ataggtgcgg tcggtcacca gcgcgtcggt
     2101 gccgccctgg tcgagcagca tcgccgcctc ggacccattg gcggcgacct gcacgtcggc
     2161 gccatcggcc ccaagccagc aggctagcgc gtcgcggacc atctcgtcgg cggccagcac
     2221 caccacgcgc cggcgcggct ggggaaggtt gacggcatgg gcgagggtca tgctggcctc
     2281 ctattccgcg gcgtggcgca tatgatcgtc ttcggtccgc ggccacgagc gcgggcgagc
     2341 ggtcaggcgc agcaggccat agcccaccag ggccgaggcc accgagccgg ccagcacggc
     2401 gaagcgggtt tcggccatga cctcgccgct ggtgaaggcc aggccgccga tgaacaggct
     2461 catggtgaag ccgatgccgg tgaggatgca gacgccgtag aactgcgacc acgacacccc
     2521 ggccggcagg cgcgccagcc ccaggcggat cagcagccac gagaaggcga acacgcctac
     2581 ctgcttgccc acgaacagcc ccaaggcgac gcccaggaac accggaccgc tgagcgactc
     2641 gatgcccatg ccggcgaacg gcacgccgga attggccagg gcgaagaccg gcaggatggc
     2701 gaaggcgacc cacggatgca gcgaatgctc cagccgccgt agcggcgccc gggcgccgcc
     2761 gtccgacacc cgcaacggaa tggccaggcc cagcacgacg ccggccaggg tggcgtggat
     2821 gccgcttttc agcaggcaca cccacaggaa caggccggcc agcatgtagg gcgccagccg
     2881 cgtcaccccg gcccggttca acacccacag gaccacggcg gcaccggcgg ccatctgcag
     2941 gaacagggcc gacaggtcgc tggaatagaa gaaggcgatg atgacgatgg cgcccaggtc
     3001 gtcgatgatg gccagggcgg ccaggaacac gcgcaggcag cccggcaccg accggcccag
     3061 gaccgacagc acgcccagcg aaaaggcgat gtcggtggcc gacgggatcg cccagccgcg
     3121 catggtggcg ggatcgcccc agttgaaggc gagatagatg ccggccggca ccgccatgcc
     3181 gcccacggcg gcgacggccg gcagcatcac ctgcgacggc gacgacaatt cgccttcaag
     3241 cat
//
LOCUS       DATIKR010000503         2995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_68249, whole genome shotgun sequence.
ACCESSION   DATIKR010000503 DATIKR010000000
VERSION     DATIKR010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68249"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1158)
                     /locus_tag="VLL76_07815"
     CDS             complement(<1..1158)
                     /locus_tag="VLL76_07815"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29449.1"
                     /translation="MANLRGEERNDALRGGGDTDVIAGLGGNDTILGRDGNDALAGGA
                     GRDRMFGGDGDDLLFVDGDDGRIDGGRGNDVAILDASDSMDFGRNALHDIEGIQDRVN
                     HDASLTFDLSNLRSADADHFVFALGDGDDEVRLMGRGDDIEIRDGKLIYDDRVTLDFE
                     GCERVSLVDLDDGRSTVFAQQSTPADGGQAAAHAGPGSAAAKASAAVSLSQDATISQD
                     ADIVTLGDLLSDICKGGNTSQADIQQTAEILQKAFGRGDVDQFAAILQDATVKGGGSI
                     DQQAAIDQIAKAVGGNIDQNAVIVQDALVYGLGAKSGGSGGGCDIDQNAAIDQWAKAY
                     KGGDVEQNAAIDQDAKAVKGGDVEQNASIDQDAKATGSGSVEQNASIDQSAY"
     gene            complement(1291..>2995)
                     /locus_tag="VLL76_07820"
     CDS             complement(1291..>2995)
                     /locus_tag="VLL76_07820"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV29450.1"
                     /translation="QLVDEMARRAEAERRLRILDAAVEQSPASVVITRPDRTIVYVND
                     AFCALTGYDRSEVEGTDIRAMGADIIPESTRRELDETIQGGRTWTGDLCSRRKDGSLL
                     WESAVISPVLGDDGDIANYLAIKQDITLQRSYEAALSRAANYDDLTGLPNRTLARDRL
                     DRLCVDDEGAVLLHVGIDNLTRINDSLGQAGGDRVITELAERFQRICHASDTVARLGG
                     DEFLVFRPGKRDDAEVALLANGLLAAAAEPIAVDMVEVRVTVRIGVAIGPRDGATAIE
                     LEKAAYSAAIRAREAGGNTIRHFQQTMDSEARWRIEAEYGLRLALSSSGLELYMQPYV
                     DAQSGIFVGAEGLIRWRRPGEGFVPPSRFIPVAERSGLIRDIDRWVIEQAARSAAELR
                     DELGQIYPVAINISPVDLHDTAIVDYTMSVLARHGLPPSAIEIEVTEGVFLADEESAG
                     EALRAFDRAGIAIAIDDFGTGYSSLSYLRRYPVKKLKIDRSFVSGVDGDPKLRGLANA
                     IASMARHLGVKVTAEGVERAEEWEALRDAGCDYIQGYLFARPMALPEVKRLVKAPALQ
                     L"
BASE COUNT          432 a          992 c         1041 g          530 t
ORIGIN      
        1 gtaggcgctt tggtcgatcg aggcattctg ctcgacactg ccgctgccgg tcgccttggc
       61 atcctggtcg atggaagcgt tctgctcgac gtcgccgccc ttgaccgcct tggcatcctg
      121 gtcgatggcg gcgttctgct cgacgtcgcc gcccttgtag gccttggccc attggtcgat
      181 ggctgcgttt tggtcgatgt cacagccgcc gccggacccg cccgacttgg cgcccaggcc
      241 gtagaccagg gcgtcctgga cgatcacggc gttctggtcg atgttgccgc ccacggcctt
      301 ggcgatctgg tcgatggccg cctgctggtc gatgctgccg ccgcccttga cggtggcgtc
      361 ctgcaggatc gccgcgaatt ggtcgacatc tccccgcccg aacgcctttt gcaggatttc
      421 agccgtctgc tggatgtcgg cctggctggt gttgccaccc ttgcagatgt cagacagcag
      481 gtcgcccaag gtgacaatgt cggcatcctg gctgatggtg gcgtcctggc tcagcgacac
      541 cgcggcggaa gccttggcgg cggccgagcc cgggccggca tgggcggcgg cctggccgcc
      601 gtcggcgggg gtgctttgct gggcgaacac ggtggaacgg ccgtcgtcca ggtcgaccag
      661 gctgacgcgc tcgcagcctt cgaagtccag ggtgacgcgg tcgtcataga tcagcttgcc
      721 gtcgcggatc tcgatgtcgt cgccgcgacc catcaaccgc acctcgtcgt cgccgtcgcc
      781 caaggcgaag acgaagtggt cggcgtcggc cgagcgcagg ttggaaaggt cgaaggtcag
      841 cgaggcatcg tggttgacgc gatcctggat gccttcgatg tcgtgcaggg cgttgcgccc
      901 gaaatccatg ctgtcgctgg catccaggat ggcgacgtcg ttgccccggc cgccgtcgat
      961 ccggccgtcg tcgccgtcca cgaacagcag gtcgtcgcca tcgccgccga acatgcggtc
     1021 gcgaccggcg ccgccggcca aagcgtcgtt gccgtccctg cccaggatcg tatcgttgcc
     1081 gccaagtccg gcgatcacat cggtgtcgcc gccgccgcgt agcgcgtcat tgcgctcttc
     1141 acctcgaaga ttggccattt ccggctccca ttggtgtcgg cccgcaaggg gtggagccag
     1201 cacaatgggc cgcgtggcct tgatcggcac agggtgcgta atgggcattc ctcaaatcgg
     1261 atagacctct tttcccatcc gggaaaagcg tcacaactgc agggcgggcg ccttgaccag
     1321 ccgcttgacc tccggcagcg ccatcggccg ggcgaacagg tagccctgga tgtaatcgca
     1381 gccggcgtcg cgcaacgcct cccattcctc ggcgcgctcg acgccctcgg cggtgacctt
     1441 gacgcccaag tggcgggcca tggaagcgat ggcgttggcg agcccgcgca gcttggggtc
     1501 gccgtccacg ccactgacga aggaacggtc gatcttcagc ttcttgaccg gatagcggcg
     1561 cagatagctc agcgacgaat agccggtgcc gaaatcgtcg atggcgatgg cgatgccggc
     1621 ccggtcgaag gcgcgcagcg cctcgccggc gctttcctcg tcggccagga agacgccctc
     1681 ggtgacttcg atctcgatgg ccgagggcgg caggccatgc ctggcgagca ccgacatggt
     1741 gtaatcgacg atggccgtgt cgtgcaggtc caccgggctg atgttgatcg ccaccggata
     1801 gatctggccc agttcgtcgc gcaattcggc ggccgagcgg gcggcctgct cgatgaccca
     1861 gcggtcgatg tcgcggatca ggcccgagcg ctcggccacc gggatgaagc gcgacggcgg
     1921 cacgaagccc tcgcccgggc ggcgccagcg gatcaggccc tcggcaccga cgaagatgcc
     1981 gctttgggca tcgacatagg gctgcatgta gagttccagg ccgctgctgg aaagcgccag
     2041 cctgaggccg tattccgcct cgatgcgcca gcgcgcctcg gaatccatgg tctgctggaa
     2101 atggcggatg gtgttgccgc cggcctcgcg ggcgcggatg gcggcgctgt aggcggcctt
     2161 ctccagctcg atggcggtgg cgccgtcacg cgggccgatg gcgacgccga tgcgcacggt
     2221 gacccgcacc tcgaccatgt ccaccgcgat cggctcggcg gcggcggcca gcagcccgtt
     2281 ggccagcagg gcgacctcgg cgtcgtcgcg tttgcccggc ctaaacacca ggaattcgtc
     2341 gccgcccagg cgcgccacgg tgtcggacgc atggcagatg cgctggaagc gttccgccag
     2401 ttcggtgatg acgcggtcgc cgccggcctg gccaagcgaa tcgttgatgc gggtcaggtt
     2461 gtcgatgccg acatgcagca gcaccgcgcc ctcgtcgtcg acgcacagcc ggtccaggcg
     2521 gtcgcgcgcc agcgtgcggt tgggcaggcc ggtcaggtcg tcgtaattgg cggcgcggct
     2581 gagcgcagcc tcgtacgagc gctgcagggt gatgtcctgc ttgatcgcca ggtagttggc
     2641 gatgtcgcca tcgtcgccca gcaccggcga gatcaccgcg ctttcccaca aaaggctgcc
     2701 gtccttgcgg cggctgcaca gatcgccggt ccaggtgcgt ccaccctgga tggtttcgtc
     2761 cagttcgcgg cgggtgcttt ccgggatgat gtcggcgccc atggccctga tgtcggtgcc
     2821 ctcgacttcg gaacggtcgt atccggtcaa ggcgcagaag gcgtcgttga cgtagacgat
     2881 cgtgcggtcg ggccgggtga tgaccaccga ggcggggctc tgctcgacgg cggcgtcgag
     2941 gatgcggagc cgccgctcgg cctcggcgcg acgcgccatc tcgtccacca actga
//
LOCUS       DATIKR010000504         3698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_177111, whole genome shotgun sequence.
ACCESSION   DATIKR010000504 DATIKR010000000
VERSION     DATIKR010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177111"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1685)
                     /locus_tag="VLL76_07825"
     CDS             complement(<1..1685)
                     /locus_tag="VLL76_07825"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29451.1"
                     /translation="MTGRIRISWLLPSLLVSFALAAAATIGLIAYNSAREQLVEQAQG
                     KMQALLEARKSELGAYLAAISEDVTLLADGHSIRDVLNEFEGAYEAMGADAAARLQRA
                     YIADNPNPVGKKHLLDAADDGSTYATAHAKYHPWLRSYADKRGYYDVFLIAEDGDVVY
                     TVFKEADFATNLMKGAWKDTDLGRLYREVLKSGKATSFTDFKGYAPSAGAPASFIMTP
                     IKARDGHVMGALAFQMPIDRLNKVMQVSAGMGESGETYIVGSDRLMRSDSRFAKESTI
                     LKTKVDNASVERALAGDSGIHALADYRGVQVFSAFAPLEFMGVRWAMLAEIDEAEVLA
                     PVARTGFLMMIAGLVVAVVVAVTGLLAARRITGPVAHMTRAMKTLAQGDLDIPIPALH
                     YTNEIGQMAHAVEVFKRNAIEVRRLEAEQEGLKRKAEEQRKATMMEMADSFEQSVGAV
                     IKTVTAAATELQAAARQMAATAQSTSAQVTSVGAATEQASANVETVASATEELTASIA
                     EIGGQVGRSNSVAEQATAVASQTSQSISRLSANVSKVGEVVQMITGIAAQTNLL"
     gene            1928..3067
                     /locus_tag="VLL76_07830"
     CDS             1928..3067
                     /locus_tag="VLL76_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043744838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HSV29452.1"
                     /translation="MNDNANRALLPAGLRDILPPDAEHEAEVVGRLMIHFSAQGFERV
                     KPPLIEFEETMLAGAGAATSAQTFRVMDPLSQRMMGVRADMTPQVARIATTRLAGAPR
                     PLRLCYSGQVLRVKGSQLRPERQFGQAGIELIGSDSAAADAEVVLLAAEALTELGVPG
                     VSVDLSLPTLVPALFADLGLAGNVSDALKGAIDHKDAAMVAAEGGKAASILSALLSAV
                     GPADRALTVLQGLDLPPAAAAERDRLAAVVELVRAGMPDLTLTVDPVENRGFEYHTGV
                     AFTLFGRSIGGELGRGGRYLAGGAEPATGATLFMDTVLAALPGPRPARRVFVPAGTPR
                     PWAQALRAQGWVTVLGLEPVGDTVAEAKRMGCGHVLAADGVKTVE"
     gene            3083..>3698
                     /locus_tag="VLL76_07835"
     CDS             3083..>3698
                     /locus_tag="VLL76_07835"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HSV29453.1"
                     /translation="MANVAVVGAQWGDEGKGKVVDWLSERADVVVRFQGGHNAGHTLV
                     INGVTYKLSLLPSGVVRGKLSIIGNGVVVDPWALFDEIDRIKAQGINITPDVLKIAEN
                     ACLILPLHGHLDRAREEASGAAKIGTTGRGIGPAYEDRVGRRAIRVCDLDDDKVLEAK
                     LDKLLAHHNALLKGLGAPLLDGQEILDKLKAIAPKILPYSDVVWQ"
BASE COUNT          566 a         1208 c         1288 g          636 t
ORIGIN      
        1 agcaggttgg tctgggccgc gatgccggtg atcatctgca ccacttcgcc caccttggac
       61 acgttggccg acaggcggct gatggattgg ctggtctgcg acgccaccgc ggtcgcctgc
      121 tcggccaccg aattcgagcg cccgacctgg ccgccgatct ccgcgatcga ggcggtcagc
      181 tcctcggtcg ccgacgccac cgtctcgacg ttggccgaag cctgttcggt ggcggcgccg
      241 acgctggtca cctgggcgct ggtggattgg gcggtggccg ccatctggcg ggcggcggcc
      301 tgcaattcgg tggcggcggc ggtcaccgtc ttgatcaccg cgcccaccga ttgctcgaaa
      361 gaatccgcca tttccatcat ggtggccttg cgctgttcct cggccttgcg tttgaggcct
      421 tcctgctcgg cctcgagcct gcggacctcg atggcgttgc gcttgaacac ctcgacggcg
      481 tgggccatct ggccgatttc gttggtgtag tggagggcgg ggatgggaat gtccaggtcg
      541 ccctgggcca gggtcttcat cgcccgcgtc atgtgggcga cggggccggt gatgcggcgc
      601 gcggccaaca ggccggtgac cgccaccacg accgccacca caaggccggc gatcatcatc
      661 aagaagccgg tgcgggcgac cggcgccagc acctcggctt cgtcgatctc ggccagcatt
      721 gcccagcgca cgcccatgaa ctcgagcggg gcgaaggcgg aaaagacctg gacgccgcga
      781 taatcggcca gggcgtggat gccgctgtcg ccggccaagg cccgctcgac cgacgcgttg
      841 tccaccttgg tcttcaggat ggtcgattcc ttggcgaacc gcgagtcgct gcgcatcagg
      901 cggtcggagc cgacgatgta ggtctcgccg ctttcgccca tgccggccga cacctgcatc
      961 accttgttga ggcgatcgat gggcatctgg aaggccaaag cgcccatcac gtggccgtcg
     1021 cgcgccttga tgggcgtcat gatgaacgag gcgggggcgc cggcggacgg ggcatagccc
     1081 ttgaagtcgg tgaagctggt ggctttgccg gatttcagga cctcgcggta caggcggccg
     1141 aggtcggtgt ccttccaggc gcccttcatc aggttggtgg cgaagtcggc ttccttgaac
     1201 accgtgtaga ccacgtcgcc gtcctcggcg atcaggaaga cgtcgtaata gccgcgcttg
     1261 tcggcgtagc tgcgcagcca ggggtgatac ttggcgtggg cggtggcata ggtgctgccg
     1321 tcgtcggcgg catccaacag gtgcttcttg ccgacgggat tgggattgtc ggcgatgtag
     1381 gcccgctgca accgcgcggc ggcatccgcg cccatggcct cgtaggcgcc ctcgaattca
     1441 ttgagcacgt cgcggatgga atggccgtcg gccagcaggg tcacgtcctc ggagatggcg
     1501 gcgagatagg cacccagttc agatttgcgt gcttccagca gcgcctgcat cttgccctgg
     1561 gcctgctcga ccaactgctc gcgcgccgaa ttgtaggcga tcagcccgat ggtggcggct
     1621 gcagccaacg cgaaggaaac cagcagcgat ggcaaaagcc agctgatccg aatacggccg
     1681 gtcatccttg gtgccccccc tagggatgag tgacgttttt atgagcaatt aatcatattg
     1741 cctctttttt caccttatag tccgttcacg gaaatgtaaa caaatgaggc aaccagacgg
     1801 cgtaggtcat ttccgtttgc cgtggagggc taaaagcgat acaccgggct gttgcccgag
     1861 ccacgggcgg cgtcggctcg cttggcgggt ccggcgacga gaaaaaaccc aggtaacgac
     1921 gcttcgaatg aacgacaacg cgaaccgggc gctgctgccc gcgggactgc gcgacatcct
     1981 gccccccgac gccgagcatg aggccgaggt ggttgggcgg ttgatgattc atttttcggc
     2041 gcagggcttc gagcgggtca agccgccgct gatcgagttc gaggaaacca tgctggccgg
     2101 ggccggcgcc gccacctcgg cgcagacctt ccgcgtcatg gacccgctga gccagcgcat
     2161 gatgggcgtg cgcgccgaca tgacgcccca ggttgcccgc atcgccacca cccggctggc
     2221 cggcgcgccg cgtccgttgc ggctgtgcta ttcgggccag gtgctgcgcg tcaagggcag
     2281 ccagttgcgt cccgagcgac agttcggcca ggccggtatc gagttgatcg gcagcgattc
     2341 cgccgccgcc gacgccgagg tcgtgctgct ggccgccgag gcgctgaccg agttgggcgt
     2401 gcccggcgtt tccgtcgatt tgtcgctgcc caccctggtg ccggcgctgt tcgccgacct
     2461 cgggctggcc ggcaacgtgt cggatgcgct gaagggcgcc atcgaccaca aggacgccgc
     2521 catggtcgcc gccgagggcg gcaaggccgc ttccatcctg tcggcgctgc tgtccgccgt
     2581 cggccccgcc gaccgtgcgc tgacggtgct gcaaggcctg gatttgccgc ccgccgccgc
     2641 cgccgagcgc gaccgcctgg ccgccgtggt ggaactggtg cgggccggca tgcccgacct
     2701 gaccctgacg gtggacccgg tcgagaatcg cggtttcgaa tatcacaccg gcgtcgcctt
     2761 caccctgttc ggccgttcga tcggcggcga gctggggcgg ggcgggcgct atctcgccgg
     2821 gggcgccgaa ccggcgaccg gcgcgacctt gttcatggat acggtgcttg ccgctcttcc
     2881 cggcccccgg ccggcgcggc gggtattcgt tcctgcgggc acgccgcgcc cgtgggccca
     2941 ggctctgcgg gcccagggat gggtgacggt cctcggcctc gagccggtgg gcgacaccgt
     3001 ggcggaagcg aagcggatgg gttgcggcca cgtgctcgcg gccgatggcg tcaagacagt
     3061 cgagtaaaag gggacgttga agatggcgaa tgttgcggtg gtcggcgccc agtggggcga
     3121 cgagggcaag ggcaaggtcg tcgattggct gtccgaacgc gccgacgtgg tcgtgcgctt
     3181 ccagggcggc cataacgcgg gccatacgct ggtgatcaac ggcgtcacct acaagctgtc
     3241 gctgctgccg tccggcgtgg tgcgcggcaa gctttcgatc atcggcaacg gcgtggtggt
     3301 cgatccgtgg gcgctgttcg acgagatcga ccgcatcaag gcccaaggca tcaacatcac
     3361 ccccgacgtg ctgaagatcg ccgagaacgc ctgcctgatc ctgccgctgc acggccacct
     3421 ggaccgcgcc cgcgaggaag cctcgggcgc cgccaagatc ggcaccaccg gccgcggcat
     3481 cggcccggcc tacgaggacc gcgtcggccg ccgcgccatc cgcgtctgcg acctggacga
     3541 cgacaaggtg ctggaagcca agctcgacaa gctgctggcg caccataacg ccctgctcaa
     3601 gggcctgggc gcgccgctgc tggacggcca ggagatcctg gacaagctca aggccatcgc
     3661 gcccaagatc ctgccttatt ccgacgtggt gtggcagc
//
LOCUS       DATIKR010000505         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_104033, whole genome shotgun sequence.
ACCESSION   DATIKR010000505 DATIKR010000000
VERSION     DATIKR010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104033"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VLL76_07840"
     CDS             <1..315
                     /locus_tag="VLL76_07840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSV29454.1"
                     /translation="KPRFEIIQLDLYGSREITDFDGEKLSEKDYARKLGVRATPTMLF
                     FKDPAEATKGGGEAVAWKVAGYLETEPFVNAFAYANQRTFAKGPDFIAWMKGPGEKVK
                     VE"
     gene            complement(427..>2033)
                     /locus_tag="VLL76_07845"
     CDS             complement(427..>2033)
                     /locus_tag="VLL76_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV29455.1"
                     /translation="LRGRNRRRAAGERMFDILSDMTFATTDTGRTIPEAVMDACAIHG
                     GGGKLMEDIERKPVGYRKILLGCLVLGRKLARLSRPCEAVGVLLPNAVGSAVTVLALQ
                     TYGRVPAMLNFTAGPANLLSACTGARVNTVLTSRRFVEMARLGETVAKLADQVKVVYL
                     DDVRATIGVMDKLRGLLSLPLIRRIHRRLSSGPDAPAVILFTSGSEGIPKGVVLSHRN
                     IVANCAQIAARIDFTSSDTVLNALPIFHAFGLTAGTVLPLVAGLKVFLYPSPLHYRIV
                     PEVAYDTGATVMFGTDTFLNGYARMAHPYDFHSVRFVVAGAEKVKDSTRAAWMEKFGL
                     RILEGYGATETAPVLAVNTPMQFRSGSVGRLLPGIEARVEPVPGIESGGRLSVKGPNV
                     MLGYFKADHPGELQPPPDGWYDTGDIVSMDEAGFVRIQGRAKRFAKVAGEMVSLGAVE
                     DLVEKLWPGHAHAVVTVPDERKGEQLVLVSTFPEAERGPLAQWMKGQGASDLAVPRTI
                     QVREKLPVLGTGKTDYVTLEREVRGA"
BASE COUNT          339 a          682 c          708 g          304 t
ORIGIN      
        1 aagccgcgct tcgagatcat ccagctcgac ctctacggct cgcgcgagat caccgatttc
       61 gacggcgaga agctgtccga gaaggattac gcccgcaagc tgggcgtgcg cgccaccccg
      121 accatgctgt tcttcaagga cccggccgag gccaccaagg gcggcggcga ggcggtggcg
      181 tggaaggtcg ccggctatct ggaaacggaa cccttcgtca acgccttcgc ctacgccaac
      241 cagcgtacct tcgccaaggg cccggacttc atcgcctgga tgaaggggcc gggcgagaag
      301 gtgaaggtgg aatagtcgga caggcgttca tgtcactctg aggcgcagcc gaagagtctt
      361 tcaggcgtag acggccgccg cctcgactga aagatccttc gctgcgctca ggatgacaat
      421 ccttgcctac gcccccctca cctcgcgttc cagcgtcacg taatcggtct tgccggtgcc
      481 cagcaccggc agcttctccc tcacctggat ggtgcgcggc accgccaggt ccgaggcgcc
      541 ctgccccttc atccactgcg ccagcgggcc gcgctcggcc tcggggaagg tggagaccag
      601 cacgagctgc tcgcccttgc gctcgtccgg cacggtgacc accgcgtggg cgtggccggg
      661 ccacagcttt tcgaccagat cctcgacggc acccagcgac accatctcgc cggccacctt
      721 ggcgaagcgc ttggcgcggc cctggatgcg gacgaagccc gcctcatcca tcgacacgat
      781 gtcgccggtg tcgtaccagc cgtcgggcgg cggctgcaat tcgccggggt ggtcggcctt
      841 gaagtagccc agcatgacat tgggtccctt gaccgacagc cggccgccgc tctcgatgcc
      901 gggcaccggc tcgacgcggg cctcgatgcc cggcagcagg cggccgacgc tgccagagcg
      961 gaactgcatg ggcgtgttga ccgccagcac cggcgccgtc tcggtggcgc catagccttc
     1021 caggatgcgc aggccgaatt tctccatcca ggcggcgcgg gtgctgtcct tgaccttctc
     1081 ggcgccggcc accacgaagc gcacgctgtg gaagtcgtag ggatgcgcca tgcgggcata
     1141 gccgttgagg aaggtgtcgg tgccgaacat caccgtggcg ccggtgtcgt aggcgacctc
     1201 gggcacgatg cggtaatgca gcggcgacgg atacaggaac accttgaggc cggccaccag
     1261 cggcagcacc gtgcccgccg tcaggccgaa ggcgtggaag atgggcagcg cgttgagcac
     1321 cgtatcgctg gaggtgaagt cgatgcgggc ggcgatctgg gcgcaattgg cgacgatgtt
     1381 gcggtgggac agcaccacgc ccttggggat gccttccgaa cccgaggtga acaggatgac
     1441 cgccggcgcg tcggggccgg aggaaaggcg gcggtggatg cgacggatca gcggcagcga
     1501 cagcaggccg cgcagcttgt ccatgacgcc gatggtggcg cggacgtcgt cgagatagac
     1561 caccttgacc tggtcggcca gcttggcgac ggtctcgccc agccgcgcca tctcgacgaa
     1621 gcggcgcgac gtcaacaccg tgttgacacg ggcgccggtg caagcggaca gcagattggc
     1681 cgggccggcg gtgaagttca gcatggccgg cacgcggcca taggtctgca gcgccagcac
     1741 ggtgacggcg gaaccgaccg cgttgggcag cagcacgccg accgcctcgc acggccgcga
     1801 cagccgcgcc agcttgcggc ccagcaccag gcagcccagc aggatcttgc gatagcccac
     1861 cggcttgcgc tcgatgtcct ccatcagttt gccgccgccg ccatggatgg cgcaggcatc
     1921 catcaccgcc tcggggatgg tgcggccggt gtcggtggtg gcgaaggtca tgtcggacag
     1981 gatgtcgaac atgcgctcgc cggcggcgcg gcggcggttg cggccgcgca gcg
//
LOCUS       DATIKR010000506         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_213520, whole genome shotgun sequence.
ACCESSION   DATIKR010000506 DATIKR010000000
VERSION     DATIKR010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213520"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1591
                     /gene="asnB"
                     /locus_tag="VLL76_07850"
     CDS             <1..1591
                     /gene="asnB"
                     /locus_tag="VLL76_07850"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HSV29456.1"
                     /translation="GHSFRTHSDTEVLLEAYRAWGSECVARLRGMFAFALWDGARQRL
                     LLARDRFGKKPLYFWQDDDGTLVFGSEIKALLKHPRVPARLDRASVSEYLGWRYVPGP
                     HTLFDGIRKLTPGAWAMWEGGRLVEVSYWSPPDAGERSNTRPSDPVGEFTRLLEECVA
                     LRMVSDVPFGAFLSGGIDSSAVVALMTRHSDQPVKTFSVGYDEARYSELRYARMVSEQ
                     FRTDHHELVIKAADVISDLPLLTRFRDAPVAEPADVPIHRLSREARRSVKMILTGEGS
                     DELLGGYPKHRAEPFVALYQRLVPASVQARMVEPAVARLPYGWRRTKTVATSFGQRDP
                     AVRLPRWFGAFTPADVVKLLVLDLPERPLDPRPFRVSRHASPLRRVLTFDQSSWLPDN
                     LLERGDRMTMAASIEARMPFMDHELAHFLARLPDRYRVRGLTGKVLLRQAMEGVLPAE
                     VLHRPKVGFRVPVNEWFQTRLRGWVHEMLLGPHSATRDWYKRDRLGRLIDEHVSGRQN
                     HEKAIWMLVTLELFQREYRLE"
     gene            1872..>2070
                     /locus_tag="VLL76_07855"
     CDS             1872..>2070
                     /locus_tag="VLL76_07855"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HSV29457.1"
                     /translation="MPFDHGHKASHPLTQAKPGQRVRVVAFAAGEGLERRMTELGIAR
                     GAVVEMVGRMGRKGAVIVAAHG"
BASE COUNT          306 a          714 c          700 g          350 t
ORIGIN      
        1 gggccacagc ttccgcaccc attccgacac cgaggtgctg ctggaagcct atcgcgcctg
       61 gggctcagaa tgcgtcgccc gcctgcgcgg tatgttcgcc ttcgccctgt gggacggtgc
      121 tcggcagcgc ctgctgctgg cgcgcgaccg cttcggcaag aagccgctgt atttctggca
      181 ggacgacgac ggcacgctgg tgttcggctc cgagatcaag gcgctgctga agcatccccg
      241 cgtgccggcg cggctggacc gggcgtcggt gtcggaatac ctgggctggc gctacgtgcc
      301 cgggccgcac accctgttcg acggcatccg caagctgacg ccgggtgcct gggccatgtg
      361 ggagggcggc cggctggtcg aggtgtcgta ctggtcgccg cccgatgccg gcgagcgctc
      421 gaacaccagg ccgtccgacc cggtgggcga gttcacccgg ctgctcgagg aatgcgtcgc
      481 cctgcgcatg gtgtcggacg tgccgttcgg cgccttcctg tcgggcggca tcgattcctc
      541 ggcggtggtg gcgctgatga cgcgccattc cgatcagccg gtgaagacct tttccgtcgg
      601 ctatgacgag gcccgctatt ccgagctgcg ctacgccagg atggtgtccg agcaattccg
      661 caccgaccac cacgaactgg tgatcaaggc ggccgacgtg atctcggacc tgccgctgct
      721 gacccgcttc cgcgacgccc cggtggccga acccgccgac gtgcccatcc accggctgtc
      781 gcgcgaggcg cggcgcagcg tcaagatgat cctgaccggc gaaggttcgg acgaattgct
      841 ggggggatac cccaagcacc gcgccgagcc gttcgtggcg ctgtaccagc ggctggtgcc
      901 ggcctcggtg caggcgcgca tggtcgagcc ggcggtggcg cggctaccct atggctggcg
      961 ccgcaccaag acggtcgcca ccagcttcgg ccagcgcgac ccagccgtcc ggctgccgcg
     1021 ctggttcggc gccttcacgc ccgccgatgt ggtcaagctg ctggtgctcg acctgcccga
     1081 acgcccgctc gacccgcgcc cgttccgcgt ctcccgccat gcctcgccac tgcgccgggt
     1141 gctgaccttc gaccagtcgt cgtggctgcc cgacaatctg ctggagcgcg gcgaccgcat
     1201 gaccatggcg gcctcgatcg aggcgcgcat gcccttcatg gaccacgaac tcgcccattt
     1261 cctggctcgc ctgccggacc gctaccgggt gcgcggcctg accggcaagg tgctgctgcg
     1321 ccaggccatg gaaggcgtgc tgccggccga ggtgttgcac cgccccaagg tcggcttccg
     1381 cgtgccggtc aacgaatggt tccagacccg cctgcgaggc tgggtccacg agatgctgct
     1441 ggggccgcat tcggcgacgc gcgactggta caagcgcgac cgcctgggcc gcctgatcga
     1501 cgagcacgtc tcgggtcggc agaaccacga gaaggccatc tggatgctgg tgacgctgga
     1561 gctgttccag cgggagtacc gcctggaata gcgcccactt tagcaggccg cggtataacc
     1621 ctggtctgga gtcttcaaac ctctgcccgt catgcccgga cttgatccgg gcatccacgc
     1681 ggatcagccc aagtcattgt ttccaaatga gtccatgcgc cgccgcgtgg atggccgggt
     1741 caagcccggc catgacggca aaggacaatg cgccgtgatt tttccgccca ctttagaact
     1801 ccgtcatgaa tggcttgaca ctaagaattg ttcgcacata agcttggccg agcaattctc
     1861 ccgaggcgtt catgcctttc gaccacggcc acaaagcgtc gcatcccctg acccaggcca
     1921 agccgggcca gcgggtccgc gtcgtcgcct tcgcggcggg cgaggggttg gagcggcgca
     1981 tgacggaatt gggcatcgcg cgcggcgcgg tggtcgaaat ggtcgggcgc atgggccgca
     2041 agggcgcggt catcgtcgcc gcccacggca
//
LOCUS       DATIKR010000507         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_237304, whole genome shotgun sequence.
ACCESSION   DATIKR010000507 DATIKR010000000
VERSION     DATIKR010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237304"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..618
                     /locus_tag="VLL76_07860"
     CDS             193..618
                     /locus_tag="VLL76_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HSV29458.1"
                     /translation="MAYITLDDLVARYGEAEMVDIADRDRDGVPDPDVLAAVIGDAER
                     DIDAQLGGRYQVPLASVPDLVKRLACQLARYYLHRVQPPEWVRSGYSDAMRQLGEIRD
                     GRVSLDGVAPAPAPVQASAGRVAGVSEPRVFTPSNLRGF"
     gene            618..1208
                     /locus_tag="VLL76_07865"
     CDS             618..1208
                     /locus_tag="VLL76_07865"
                     /inference="COORDINATES: protein motif:HMM:NF016927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HSV29459.1"
                     /translation="MATLPITVTDGPAIDALAQLAQRSDDLTPFFTEWGAALVTSTVR
                     RFDSQTDPDGLPWAPLALSTLKRKKGRGKILQLSGILRQSITYRASRTMLEVGTPMIY
                     GRTHQFGARIERHAQTVVGGFRKWRDVTVTRDDGSTYTAKRFAGPAHKRISMMARMEI
                     GAGTIEVPARPFLGLSEADQRRGARIVGRYLLGAEA"
     gene            1205..1633
                     /locus_tag="VLL76_07870"
     CDS             1205..1633
                     /locus_tag="VLL76_07870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29460.1"
                     /translation="MILSAARARLESATGSPLRHVGGAISLAAAQDNPPQNTPAGFVY
                     PSASASDASARVNETRQRITTRFGVALFVRTANDPTGGGKNDLVEELYTWVRGVLIGW
                     VPDPGNGQAVTFSRGYLAGFEGGGLWWAEEFTVNHYHRKS"
     gene            1642..1830
                     /locus_tag="VLL76_07875"
     CDS             1642..1830
                     /locus_tag="VLL76_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29461.1"
                     /translation="MQGGSYTKDPKTGALTLVEPATKPATAAQRAAEEKTAAEKADAA
                     DAPAAKTTRAKPAPAAEE"
     gene            1834..>2134
                     /locus_tag="VLL76_07880"
     CDS             1834..>2134
                     /locus_tag="VLL76_07880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29462.1"
                     /translation="MSELYWKKKVLLAKKEATYGVDATPLAANAIRAQDVSINPLEAQ
                     ANQRAQVSDKMGAAASRLVGKHVKVDFAVELAGGGAAGTPPAYADLLKGCAMAEII"
BASE COUNT          357 a          789 c          709 g          279 t
ORIGIN      
        1 tgaactggcg gctttgaaat cccagggcga ggcgccgccc ccgccgccgg acggcgaggc
       61 gccgcccgag gcgaccaacc ccgcccccaa ggccaagtcg gccaagggca agtaataccc
      121 cgcgagcaga agaaccgagg ggcggccgca atccggcggc cgcccccagg agacaggaag
      181 cgttagagcg acatggccta cataaccctc gacgacctgg tggcgcgcta cggcgaggcg
      241 gagatggtgg acatcgccga ccgcgatcgc gacggcgtcc ccgatcccga cgtgctggcc
      301 gccgtcatcg gggacgccga gcgcgacatc gatgcccaac tgggtgggcg ctaccaggtt
      361 ccgctggcca gcgtgccgga cctggtcaag cggctggcct gccaattggc tcgctattac
      421 ctgcaccggg tgcagccgcc ggaatgggtt cgatccggct attccgacgc catgcgccaa
      481 ctgggcgaaa tccgcgacgg ccgcgtcagc ctggacgggg tcgcgccggc gccggcgccg
      541 gtccaggcca gcgccggccg tgtggccggc gtgtcggagc cccgggtgtt cacgccgtcc
      601 aacctgcggg ggttctgatg gcgacactgc cgatcaccgt caccgatggt cccgccatcg
      661 acgccctggc gcaactggcc cagcgctccg acgacctgac gcccttcttc acggaatggg
      721 gtgcggcgct ggtgacatcg accgtccgtc ggtttgacag ccagaccgat cccgacggcc
      781 tgccgtgggc accgctggcg ctgtcgacgc tcaagcgcaa gaagggccgg ggcaagatcc
      841 ttcaattgtc gggcatcctg cgccagtcga tcacctaccg tgccagccgc accatgctgg
      901 aggtcggcac ccccatgatc tatggccgca cgcaccagtt cggcgcccgg atcgagcgcc
      961 atgcccagac ggtcgtcggc ggcttccgca agtggcgcga cgtcaccgtc acccgcgacg
     1021 acggttcgac ctataccgcc aagcgcttcg ccggtccggc ccacaagcgc atcagcatga
     1081 tggcgcgcat ggagatcggc gccggcacca tcgaggttcc ggcccgtccg ttcctcggcc
     1141 tgtccgaagc cgatcagcgc cggggcgcca ggatcgtcgg ccgctacctg cttggagccg
     1201 aggcatgatc ctgtccgccg cccgcgcccg tctggaatcc gcgaccggaa gcccgctacg
     1261 ccatgtcggc ggcgccatat ccctggccgc cgcccaggac aatccgccgc agaacacgcc
     1321 ggccgggttc gtctatccgt cggcctctgc gtccgacgcc tccgcccggg tcaacgagac
     1381 ccgccagcgc atcaccaccc ggttcggcgt cgcgctgttc gtccgtaccg ccaacgaccc
     1441 caccggcggc ggcaagaacg acctggtcga ggagctttac acctgggtgc gcggcgtcct
     1501 gatcggctgg gtgcccgatc ccggcaacgg ccaggccgtc accttctcgc gcggctacct
     1561 ggccggcttc gaggggggcg gcctgtggtg ggccgaggaa ttcaccgtca accactacca
     1621 ccgcaagagc taggaggccc catgcagggc ggatcgtaca ccaaggaccc caagaccggc
     1681 gcgctgacgc tggtcgaacc ggcgaccaag ccggccaccg ccgcccagcg cgcggccgag
     1741 gaaaaaaccg ctgccgaaaa ggccgatgcc gctgacgcgc cggccgccaa gaccacccgc
     1801 gccaagccgg cgccggccgc cgaggagtag cctatgagcg agctctattg gaagaagaag
     1861 gtgctgctgg cgaagaagga ggccacctac ggcgtcgatg ccacgccgct ggccgccaac
     1921 gccatccgcg cccaggacgt gtcgatcaat ccgctggagg cccaggccaa ccagcgcgcc
     1981 caggtcagcg acaagatggg cgcggccgcc tcgcgcctgg tcggtaagca cgtcaaggtc
     2041 gacttcgccg tcgagctggc gggcggcggt gccgccggca ccccgccggc ctatgccgac
     2101 ctgctgaaag gctgcgccat ggccgagatc atca
//
LOCUS       DATIKR010000508         3735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_164595, whole genome shotgun sequence.
ACCESSION   DATIKR010000508 DATIKR010000000
VERSION     DATIKR010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164595"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLL76_07885"
     CDS             complement(<1..383)
                     /locus_tag="VLL76_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29463.1"
                     /translation="MKRSTRLFATVGLAAMVSACQTVREQEQAVKPEVVHAYLADKPD
                     ELKQHFYVTLTQGKRNQVLNHMRLGLAAMEMGKFELAEQLFDDALDNIETIYANNEHA
                     EKARGLFVKELTKDFKGEPYERSMA"
     gene            complement(420..1040)
                     /locus_tag="VLL76_07890"
     CDS             complement(420..1040)
                     /locus_tag="VLL76_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HSV29464.1"
                     /translation="MRRLMSVVAATLALSACQTVQNQAGTPTTYQDPASMGAVRGVGI
                     ESQDIVSMTDQMMRDMLTEPRLANASPPPNVILDAEYFINESASRLNRNSITDRLRVG
                     LQRAAQGRMQFVGRHYANMVQSERNLKRKGVVDKGKNPTAEAQKGGDYRLGGRITSLD
                     ARDSKTGLTQRYHQITFEMIDLETSEIVWSGIYEFAKAAADDIIYR"
     gene            complement(1212..2189)
                     /locus_tag="VLL76_07895"
     CDS             complement(1212..2189)
                     /locus_tag="VLL76_07895"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV29465.1"
                     /translation="MTAPLALAVVGAGAMARRRLTALMATGRVRLCGVVARRRQRAEA
                     LASEFGGAACFDDLDGLAAARPDAVLLEVPHDVQDGLAAAVVARGWHLLVGGPLATSL
                     AAGTALTEAAAGRVVVEAGFEARYRPVWENARALLADGTLGTLVAVQATALWAGDPDS
                     WYYDEQASGGMPLTHMTYCFVNPLRWLLGEPSQVAAMSNSLIHHGGRFVRDETCAALL
                     RFPGDVVASLTAGYVKSAEDGSWRVTLIGHRATLDVEPTEMGAGRLRLRHGDSVAETV
                     FPPDCDGFRAQAEAFLDAIAGSGSVRNPPAECLGDLRVVEAIRGAVVSR"
     gene            complement(2186..3163)
                     /locus_tag="VLL76_07900"
     CDS             complement(2186..3163)
                     /locus_tag="VLL76_07900"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSV29466.1"
                     /translation="MTTAISDIQPGSGFLAAEGEEPHKRRRADILRAHPEIRALIGPN
                     PASALLVVALVALQLGAAALLSRHEAPALVVVAVAFVFGACCCAMLNALIHDASHEVV
                     LRGAAANRAIALVANLPLVSWAAMPFFRYHSWHHDAMGDYEMDVGIPTHFEAAWVGNS
                     AWRKAVWLAAFPFFQWLRTRKFRLQAPVWDRWMVANAVIQTAADVAIVYVLGIEALVY
                     LALSYGLAVGFHPLGTRVIQEHFIVADGEETNNYVGWANLLECNFGYHVEHHDFPGIP
                     WNRLPRLGRIAPEFYAARPVFRSRVALMIDFIRNPRWHLHRHAVRNAPA"
     gene            complement(3160..>3735)
                     /locus_tag="VLL76_07905"
     CDS             complement(3160..>3735)
                     /locus_tag="VLL76_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine/phosphatidylserine synthase"
                     /protein_id="HSV29467.1"
                     /translation="GIDGPLARRLQVTTVMPRIDGTVLDLVVDYLTFVLVPAELIRRM
                     GMLPEAWGVPAVALILLTACYHYARRDPKTADGYFRGFPALWNFVAFYFFLLRPSPEV
                     GLAIVVALAVLTCTNLPFAHPLRVRHWPRATAIAIAAWAASGAAMLAQDGPPAPALLA
                     VSLASLAWVVGLGLWRALRRTDDQPPEGSVP"
BASE COUNT          589 a         1251 c         1352 g          543 t
ORIGIN      
        1 taggccatcg agcgttcgta gggctcgccc ttgaagtcct tggtcagttc cttgacgaac
       61 agcccgcgcg ccttttcggc atgctcgttg ttggcgtaga tggtttcgat gttgtcgagc
      121 gcgtcgtcga acaactgctc cgccaattcg aacttgccca tctccatggc ggccaggccc
      181 aggcgcatgt ggttcagcac ctggttgcgc ttgccctggg tcagggtgac gtagaaatgc
      241 tgcttcagtt catccggctt gtcggccaga taggcgtgca ccacctcggg cttcaccgcc
      301 tgttcctgct cgcgcaccgt ctggcaggcc gacaccatgg cggccagtcc gacggtggca
      361 aacaggcgcg tcgatcgctt catcgtcatc gccatgcccc cccctgcgat ccccccggat
      421 cagcgataga tgatgtcgtc ggcggcggcc ttggcgaatt cgtagatgcc gctccacacg
      481 atctcgctgg tttccaagtc gatcatctcg aaagtgatct ggtggtagcg ctgggtcagg
      541 ccggtcttgg aatcgcgcgc gtccagcgag gtgatgcggc cgcccaggcg ataatcgccg
      601 cccttctggg cctcggcggt ggggttcttg cccttgtcga ccacgccctt gcgcttcagg
      661 ttgcgctcgg actgcaccat gttggcgtag tggcggccga cgaactgcat gcggccctgg
      721 gcagcgcgct gcaggccgac gcgcaggcgg tcggtgatgg aattgcggtt caggcgcgag
      781 gcgctctcgt tgatgaaata ctcggcgtcc aggatgacgt tggggggcgg gctggcgttg
      841 gccaggcgcg gctcggtcag catgtcgcgc atcatctggt cggtcatgct gacgatgtcc
      901 tggctttcga tgccgacgcc gcgcaccgct cccatggagg cggggtcctg ataggtggtc
      961 ggcgtgccgg cctggttctg cacggtctgg caagcggaca gcgccagcgt ggcggccacg
     1021 acggacatca gacgacgcat gaacggatct cccccttgga gtgaaaggca atagggcgtg
     1081 gaacggcgaa ccgggcgacc gatggttgtc ggccggcgca tacgatagtc caactcccgc
     1141 ttatttgcat caggcgatta cctgtgcggg tgcgtcagac cagggcccga tgatgagaac
     1201 tcatcgggcc atcaccggga gacaacggcg ccccggatgg cctcgacgac ccgcaggtcg
     1261 cccaggcatt cggccggcgg gttgcgcacg ctgccgctgc cggcgatggc gtcgaggaag
     1321 gcctcggcct gggcgcggaa gccgtcgcaa tcgggcggga acaccgtttc ggcgacgctg
     1381 tcgccgtgcc gcagccgcag ccgccctgcg cccatctcgg tgggctcgac gtccagggtg
     1441 gcgcggtggc cgatcagggt gacgcgccaa ctgccgtcct cggccgattt gacgtagccg
     1501 gccgtcaggc tggcgaccac atcgccgggg aagcgcagca gggcggcgca ggtctcgtcg
     1561 cgcacgaagc ggccgccgtg atggatcagc gaattggaca tggccgccac ctgcgacggc
     1621 tcgcccagca gccagcgcag cgggttgacg aagcaatagg tcatgtgggt cagcggcatg
     1681 ccgccactgg cctgctcgtc gtaataccag ctgtcggggt cgccggccca cagggcggtg
     1741 gcctgcaccg ccaccagggt gcccagggtt ccgtcggcca gcagcgcgcg ggcgttttcc
     1801 cacaccgggc gatagcgcgc ctcgaagccg gcctcgacca ccacccggcc ggcggcggct
     1861 tcggtcaggg ccgtgccggc ggccagcgag gtcgccagcg ggccgcccac cagcaggtgc
     1921 cagccgcgcg ccaccacggc ggcggccaag ccgtcctgca cgtcgtgcgg cacttccagc
     1981 agcaccgcgt cgggccgtgc cgccgccagg ccgtcgaggt cgtcgaagca ggccgcgccg
     2041 ccgaattccg acgccagcgc ctcggcccgc tgccgccggc gcgccaccac gccgcacagc
     2101 cgcacccggc cggtggccat cagggcggtc aggcggcggc gggccatggc gccggcgccg
     2161 accaccgcca aggccagcgg cgcggtcacg ccggggcgtt ccggacggcg tggcggtgca
     2221 ggtgccagcg cgggttgcgg atgaagtcga tcatcaaggc cacccgcgac cggaacaccg
     2281 gccgggcggc atagaattcg ggggcgatgc ggcccaggcg gggcaggcgg ttccagggaa
     2341 tgccggggaa gtcgtggtgc tcgacgtgat agccgaaatt gcactccagc aggttggccc
     2401 agcccacgta attgttggtc tcctcgccgt cggcgacgat gaaatgctcc tggatcaccc
     2461 gggtgcccag cgggtggaag cccacggcca ggccgtagga cagcgctagg tagaccagcg
     2521 cctcgatgcc caggacataa acgatggcga cgtcggcggc ggtctggatc accgcgttgg
     2581 cgaccatcca gcggtcccac accggcgcct gcaggcggaa cttgcgggtg cgcagccact
     2641 ggaagaacgg gaaggccgcc agccagaccg ccttgcgcca ggccgagttg ccgacccagg
     2701 ccgcctcgaa atgggtgggg atgccgacgt ccatctcgta atcgcccatg gcgtcgtggt
     2761 gccacgagtg atagcggaag aacggcatgg ccgcccacga caccagcggc aggttggcga
     2821 ccagggcgat ggcccggttg gcggcggcgc cgcgcagcac cacctcgtgg ctggcgtcgt
     2881 ggatcagggc gttcagcatg gcgcagcagc aggcgccgaa cacgaaggcg acggcgacca
     2941 ccaccagggc cggcgcctcg tggcgcgaca gcagggcggc ggcccccaat tgcaacgcca
     3001 ccagcgccac caccagcagg gccgaggccg gattggggcc gatcagggcg cggatctcgg
     3061 gatgggcgcg caggatgtcg gcacggcgcc gcttgtgcgg ctcctcgcct tcggcggcaa
     3121 ggaagccgct gcccggttgg atgtcggaaa tggcggtggt catggcacgc tgccttcggg
     3181 cggttggtcg tcggttcggc gcagggcgcg ccacagcccc aatcccacca cccaggccag
     3241 cgacgccagc gacaccgcca gcagcgccgg ggccggcggc ccgtcctgcg ccagcatggc
     3301 ggcgccggat gccgcccagg cggcgatggc gatcgcggtg gcgcgcggcc agtggcgcac
     3361 ccgcagcgga tgggcgaagg gaaggttggt gcaggtcagg accgccagcg cgacgacgat
     3421 ggcaaggccg acctcgggcg acggccgcag caggaagaaa tagaaggcga cgaaattcca
     3481 cagggcggga aagccccgga aatagccgtc ggcggtcttg gggtcgcggc gggcgtagtg
     3541 gtagcaggcg gtcagcagga tcagcgccac cgccggcacg ccccaggcct cgggcagcat
     3601 gcccatgcgg cggatcagct cggccgggac cagcacgaag gtcaggtagt cgaccaccag
     3661 gtccagcacg gttccgtcga tgcgcggcat cacggtggtg acctgcagcc ggcgcgccag
     3721 cgggccgtcg atgcc
//
LOCUS       DATIKR010000509         2938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_128254, whole genome shotgun sequence.
ACCESSION   DATIKR010000509 DATIKR010000000
VERSION     DATIKR010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128254"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VLL76_07910"
     CDS             complement(<1..673)
                     /locus_tag="VLL76_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HSV29468.1"
                     /translation="MALSPRLDIRQTQALVMTPQLQQAIKLLQLSNLELTAFIDQELE
                     RNPLLEREDGERPDGAEAPEIELDTRGADEAPMLDAADGGPDASLDVDVDNLYNNDSA
                     SDGIDGEAFGQWSRTGGRMDFEDGESNLEQTLTESVSLRDHLTAQLNVDMADPADRMI
                     GLHLIEMLDEAGYLIGDIADVAAALGCAVEQVESVLKRMQRFDPVGIAARSLKECLAV
                     QLIEKD"
     gene            complement(694..1461)
                     /gene="lptB"
                     /locus_tag="VLL76_07915"
     CDS             complement(694..1461)
                     /gene="lptB"
                     /locus_tag="VLL76_07915"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HSV29469.1"
                     /translation="MDDTQTQAGPRLVADNPGLVARNIGKGFKRRPVLRDVSITVQRG
                     EAVGLLGPNGAGKTTCFYCITGLISPDAGAILLDGHDITQLPMYRRARLGIGYLPQEA
                     SIFRGLSVEGNIMAVLEVIEPVRDKREAMLEELLAEFSIEHLRRAPAMALSGGERRRV
                     EIARALASKPHFILLDEPLAGIDPIAVSDIRDLVAHLKDRGIGVLITDHNVRETLDII
                     DRAYILHDGKVLMEGRPSEIVAHEGVRRVYLGERFSL"
     gene            complement(1476..2357)
                     /locus_tag="VLL76_07920"
     CDS             complement(1476..2357)
                     /locus_tag="VLL76_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HSV29470.1"
                     /translation="MRAVAAFLGLAAWLAAGPVAAQGFNLSRNNDEQIQVYADEGIEW
                     MSEANRVVARGNAKAVRGQVTVTADSLTAYYRNGPGGDEIWRLDADGNVTIQSAKETA
                     TGTKATYDLDKAIFVLRGQPAKLVTPNETFTATDALEYWEKERMAVLRGDGVAVQKDR
                     TIRADVLAARFKDGAKGDLELKRADAYGNVVLTTAKEKVTGERGDYNAESGIATVAGS
                     VKITRDGNELNGGYAHVNLNTGISKLFGSPPGARDGDGRVRGVFTPEKQDLEGRRALF
                     KGAGPGKAEEKPKAGGQ"
     gene            complement(2354..>2938)
                     /gene="lptC"
                     /locus_tag="VLL76_07925"
     CDS             complement(2354..>2938)
                     /gene="lptC"
                     /locus_tag="VLL76_07925"
                     /inference="COORDINATES: protein motif:HMM:NF018537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HSV29471.1"
                     /translation="YSRFVGAMKIILPSLAVVLLGLVVAWPRLVSDDDRFHIGFAKIS
                     PDQVQTLSMVNARYFGVDERNNPFTVTADAATEEDPKAGIIVLQTPKADFTTKSGANV
                     YLQAEQGFYHQKQQLLELVGDVSLFHDQGYELHTEEAEIDLAKGNAVGTKPVDGHGPQ
                     GKLVGQGFKISDNGKQVLVTGRSSLILKGPGGKK"
BASE COUNT          414 a          994 c          985 g          545 t
ORIGIN      
        1 ggtccttttc gatcaactgg accgccaggc attccttgag cgagcgcgcg gcgatgccga
       61 ccgggtcgaa gcgctgcatg cgcttgagca ccgattccac ctgctcgacc gcgcagccca
      121 gcgcggcggc gacgtcggcg atgtcgccga tcagatagcc cgcctcgtcg agcatttcga
      181 tcaggtgcag gccgatcatg cggtcggccg gatcggccat gtcgacgttg agttgcgccg
      241 tcaggtggtc gcgcagggag acgctttccg tcagcgtctg ttcgaggttg gactcgccgt
      301 cctcgaaatc catgcggccg ccggtgcggc tccactgccc gaacgcctcg ccgtcgatgc
      361 cgtccgaggc gctgtcgttg ttgtagaggt tgtccacatc cacatcgagc gacgcgtcgg
      421 ggccaccgtc ggcggcatcc agcatcggcg cctcgtcggc gccacgggtg tccagctcga
      481 tctcgggggc ctcggcgcca tcggggcgct cgccgtcctc gcgctccagc agcgggttgc
      541 gctccagctc ctggtcgatg aaggcggtca gttccaggtt ggacaattgc agcagcttga
      601 tcgcctgctg caattgcggc gtcatcacca gagcctgcgt ctggcggatg tccaaccggg
      661 gggaaagcgc catggttcag gcccgtccga gcatcacaga ctgaaccgtt cgcccaggta
      721 gacccggcgc accccttcat gcgccacgat ctcggagggg cggccctcca tcagcacctt
      781 gccgtcgtgc aggatgtagg cgcggtcgat gatgtcgagc gtctcgcgca cgttgtggtc
      841 ggtgatcaac acgccgatgc cgcgatcctt gagatgcgcc accaggtcgc ggatgtcgga
      901 caccgcgatg gggtcgatgc cggccagcgg ttcgtcgagc aggatgaaat gcggcttgga
      961 cgccagggcg cgggcgatct cgacgcggcg gcgctcgccg cccgacagcg ccatggccgg
     1021 cgcccggcgc agatgctcga tcgagaactc ggccagcaat tcctcgagca tggcctcgcg
     1081 cttgtcgcgc accggctcga tcacttccag caccgccatg atgttgccct cgaccgacag
     1141 gccccggaag atcgaggctt cctgcggcag atagccgatg cccaggcggg cgcggcggta
     1201 catgggcaat tgggtgatgt cgtggccgtc cagcaggatg gcgcccgcat cggggctgat
     1261 caggccggtg atgcagtaga agcaggttgt cttgccggcg ccgttgggcc ccaacaggcc
     1321 gaccgcctcg ccgcgctgca cggtgatgga gacgtcgcgc agcaccgggc ggcgcttgaa
     1381 gcccttgccg atgttgcggg ccaccaggcc gggattgtcc gccaccaggc gcggaccggc
     1441 ctgggtctgg gtgtcgtcca tggaaccttc cgccatcatt gcccccccgc cttgggcttt
     1501 tcctcggcct tgccggggcc ggcgcccttg aacagggcac ggcggccctc gaggtcctgc
     1561 ttttcggggg tgaacacgcc gcgcacccgg ccgtcgccgt ccctggcgcc gggcgggctg
     1621 ccgaacagct tgctgatccc ggtgttgagg ttgacgtgcg cgtagccgcc gttcagctcg
     1681 ttgccgtcgc gggtgatctt aaccgaaccc gcgacggtgg cgataccgct ttcggcgttg
     1741 tagtcgccgc gctcgccggt caccttttcc ttggcggtgg tcagcaccac gttgccatag
     1801 gcgtcggcgc gcttcagctc cagatcgccc ttggcgccgt ccttgaagcg ggcggccagc
     1861 acgtcggccc tgatggtgcg gtccttctgc accgcgacgc cgtcgccgcg cagcaccgcc
     1921 atgcgttcct tttcccaata ttccagggcg tcggtggcgg tgaaggtctc gttgggcgtc
     1981 accagcttgg ccggctggcc gcgcagcacg aagatggcct tgtcgaggtc gtaggtcgcc
     2041 ttggtgccgg tggcggtttc cttggccgac tggatggtga cgttgccgtc ggcgtccagc
     2101 cgccagatct cgtcgccgcc ggggccgttg cgataatagg ccgtcagcga atcggcggtc
     2161 accgtgacct ggccgcgcac cgccttggcg ttgccgcgcg ccaccacccg gttggcctcg
     2221 ctcatccact cgatgccctc gtcggcatag acctggatct gttcgtcgtt gttgcgcgac
     2281 agattgaagc cctgcgccgc aaccggcccg gccgcaagcc aagccgccag ccccaggaaa
     2341 gccgccaccg ccctcatttc ttcccccccg ggcccttcag gatcaggctg gaccggccgg
     2401 tgaccagaac ctgcttgccg ttgtcggaaa tcttgaaccc ctgtcccacc agtttaccct
     2461 gtgggccgtg gccgtccacc ggcttggtgc cgacggcgtt gcccttggcc aggtcgatct
     2521 cggcttcctc ggtgtgcagc tcgtagccct ggtcgtggaa caggctgacg tcgccgacca
     2581 gttccaacaa ttgctgcttc tggtgataga agccctgctc ggcctgcaga tagacgttgg
     2641 cgccgctctt ggtggtgaag tccgccttgg gcgtctgcag cacgatgatg ccggccttgg
     2701 ggtcttcctc ggtggcggcg tcggcggtga cggtgaacgg gttgttgcgc tcgtcgacgc
     2761 cgaaatagcg ggcgttgacc atgctcagcg tctgcacctg atcgggcgag atcttggcga
     2821 agccgatgtg gaagcggtcg tcgtcgctga ccagccgagg ccacgccacc accaggccca
     2881 gcagcaccac cgccagcgac ggcaggatga tcttcatggc gccgacgaag cgggaata
//
LOCUS       DATIKR010000510         2080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_104160, whole genome shotgun sequence.
ACCESSION   DATIKR010000510 DATIKR010000000
VERSION     DATIKR010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104160"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..279)
                     /gene="rpmF"
                     /locus_tag="VLL76_07930"
     CDS             complement(91..279)
                     /gene="rpmF"
                     /locus_tag="VLL76_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009869122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HSV29472.1"
                     /translation="MAVPKKKTSKSRRNMRRAHHALTHTGINECPNCGEMKQPHHVCG
                     SCGHYDGREVVVQAEANA"
     gene            complement(367..906)
                     /locus_tag="VLL76_07935"
     CDS             complement(367..906)
                     /locus_tag="VLL76_07935"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HSV29473.1"
                     /translation="MIETPEFSRKFRLDQISAAGSDHRLEANAAERDALARRFGILGI
                     ASLVAEIRVKAIAAGTMVRVKGRLTAEVTQACVVTLEPVEQKVDETFELTFREAVEED
                     DEDGEIEFSMEEDDPPDAIVNGMIDVGEAVAEHLALALDPFPRKAGARVPAAATAAAP
                     VEEKPNPFAVLAALRQKKE"
     gene            complement(911..1459)
                     /locus_tag="VLL76_07940"
     CDS             complement(911..1459)
                     /locus_tag="VLL76_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HSV29474.1"
                     /translation="MPFRRFLDRRRRERVAHGLYVAVVEQSRHPAFYRDLGVPDNVDG
                     RFDLLAAHAFLAMRRLGRIGGTQADEARILSQSLFDLMFADMDQNLREMGVTDLAVGR
                     KVHQMAEAFYGRVSAYETAIAEGEAALAQAVERNLYRKAEGVAPDQPAKVAAYLIRQD
                     AHLATLADDALMDGRLAFAPLD"
     gene            1575..2051
                     /gene="bamE"
                     /locus_tag="VLL76_07945"
     CDS             1575..2051
                     /gene="bamE"
                     /locus_tag="VLL76_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HSV29475.1"
                     /translation="MLRLRIPMNSAFKPSLSALAVLLSLGAAACTPAVDQRGNLPHPD
                     LVAQVQAGKSTRDDVLAVLGTPSTTMTYGGESWHYISARTETKAFFEPEFKERKVLSI
                     VFDKNGVVREITSKGLEDGREVESVERVTPTAGKDLTILEQLIGNVGRFSKDPAEK"
BASE COUNT          365 a          679 c          686 g          350 t
ORIGIN      
        1 cgaccatatc gggggcgtgg tcgcccccca tggcgtcgat ggagatcgtg acgggtgcgc
       61 tcacttaacc gcgctccact gcgtggccaa ttaggcgttg gcctcggcct gaacgacaac
      121 ctcgcgacca tcgtagtggc cgcacgagcc gcaaacgtgg tggggctgct tcatctcgcc
      181 acagttcggg cactcgttga tgccggtgtg ggtcagcgcg tggtgcgcac gacgcatgtt
      241 gcggcgggac ttggaggtct ttttcttcgg aacagccatt tttgtactct cagctcagag
      301 gcccgttcgg ggaaaggcag gtttattagc gaaaaagacc gcagggagca agcaaagcct
      361 tgcccctcac tccttttttt gacgcagggc tgccagaacg gcgaagggat tgggcttctc
      421 ctccaccggc gcagccgccg tggcggccgc tggaacccta gcgccggcct tgcgcggaaa
      481 gggatccagc gcaagggcga ggtgctcggc caccgcctcg ccgacgtcga tcatgccgtt
      541 gacgatagca tccggcggat cgtcttcttc catggaaaat tcgatctcac catcctcgtc
      601 atcctcctcg acggcttcgc ggaaggtcag ctcgaaggtt tcgtccacct tctgctcgac
      661 gggttcgagc gtcacgacgc aggcctgggt gacctcggcg gtcaggcggc ccttgacgcg
      721 caccatggtg ccggcggcga tggccttgac gcggatttcg gcgaccaggc tggcgatgcc
      781 caggatgccg aaccggcggg caagggcgtc gcgttcggcg gcattggcct cgaggcgatg
      841 atcggacccg gcggccgaga tctggtcgag gcggaacttg cgggaaaatt caggggtttc
      901 gatcattcca tcaatccaac ggggcgaacg ccaggcggcc gtccatcaag gcatcgtcgg
      961 ccagggtggc gagatgcgcg tcctgacgga tcagataggc cgccaccttg gccggctggt
     1021 cgggggcgac accctcggcc ttgcgataga gattgcgctc gaccgcctgg gccaaagccg
     1081 cctcgccctc ggcgatggcg gtctcatagg ccgacacgcg gccatagaag gcctcggcca
     1141 tctggtggac cttgcggccg acggcgaggt cggtgacgcc catctcgcgc aggttctggt
     1201 ccatgtcggc gaacatgagg tcgaacagcg actgcgacaa gatacgcgcc tcgtcggcct
     1261 gggtgccgcc gatgcggccc aggcgccgca tggccaggaa ggcgtgcgcg gccagcaggt
     1321 cgaagcggcc gtccacgttg tcgggcacgc cgagatcgcg atagaaggcg gggtgacggg
     1381 attgttccac cacggcaacg taaagcccgt gggcgacgcg ctcgcggcgg cgacgatcta
     1441 ggaatcggcg aaaaggcatg gaccgtcctg actgaggttt ccccgtcgcc ctaggcggtg
     1501 cggggtcgtt gacaatgccg cggcaaggcg tgcaatgttc ggcacaactt tggccacgga
     1561 gcccgtctcc gtcaatgctt cggctgcgga tccccatgaa cagcgccttc aagccctccc
     1621 tttccgccct tgccgtgctg ctgtcgctcg gcgcggccgc ctgcactccc gccgtggacc
     1681 agcgcggcaa cctgccccac cccgacctgg tcgcccaggt ccaggccggc aaatcgaccc
     1741 gcgacgacgt cctcgccgtc ctcggcactc cgtccaccac catgacctac ggcggcgaga
     1801 gctggcacta catctcggcc cgcaccgaga ccaaggcgtt cttcgaaccg gaattcaaag
     1861 agcgcaaggt cctgtcgatc gtgttcgaca agaacggcgt cgtgcgcgag atcacgtcca
     1921 agggcctgga ggacggccgc gaggtggaaa gcgtggagcg cgtcactccc accgccggca
     1981 aggatctgac gatcctggag cagctgatcg gcaacgtcgg ccgcttctcg aaggaccccg
     2041 ccgagaaata gcccatccgg aaacggaaaa agccccgacc
//
LOCUS       DATIKR010000511         1947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_164634, whole genome shotgun sequence.
ACCESSION   DATIKR010000511 DATIKR010000000
VERSION     DATIKR010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164634"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1060
                     /locus_tag="VLL76_07950"
     CDS             <1..1060
                     /locus_tag="VLL76_07950"
                     /inference="COORDINATES: protein motif:HMM:NF014207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HSV29476.1"
                     /translation="GGDDVLVADDPAAGTASTQTQAASSATQAQGKQQAQGNQAAGTT
                     ELAQQQAEDMAAQLADTGAAVKVNVKVDDKAAAAAADTTAQTDAAAAADLVVAQVAGA
                     ETEADGQAQTGQSQTGQNQNGQNANAAQQVLRNGALENAQAAQGKASSAKPFAAALAQ
                     ETGSTGQATQANSGNQTQNVAGVNAANATQATQKTAQAQAAQAPQQPRHVDPKQVVDQ
                     ISVQISKQAKDGGDTIKVQLKPTDLGSIEIKLEVQDGRVTAHVTADNKDTLAALQKDA
                     RGLEKALQDAGLKTEQGALTFSLSNDNKQAQQEAGQQGKPGRRSRLARAHEASQIGAA
                     SAAQPLRAGGRSGVDIRV"
     gene            1075..>1947
                     /locus_tag="VLL76_07955"
     CDS             1075..>1947
                     /locus_tag="VLL76_07955"
                     /inference="COORDINATES: protein motif:HMM:NF025229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlgD immunoglobulin-like domain containing
                     protein"
                     /protein_id="HSV29477.1"
                     /translation="MSTIAAAASASTAQDAAQSSVSRSKLAQNFDTFLVMLTTQLKHQ
                     DPLSPMDSTEFTNQLVQFANVEQQINANSNIEKLIGVNQMNQQAMAISYIGRTVEADS
                     TLVPLQGGGESQTDKVQLLGGKSYFSYSLAEKAASVQVKIKDADGNVVRTLDGKTAQG
                     KNEIVWDGKDKDNVQCVDGTYTVEVAAVNSAGTAINATTSAYTRSGKAGFSYTLAEDA
                     KTMQVVIKDMSGAIVRNLTGPGDKGRHEMQWDGLDKDGRPCEDGAYALEVVAVAGDGE
                     TVEAATTVYGRITDV"
BASE COUNT          394 a          723 c          630 g          200 t
ORIGIN      
        1 gggcggcgac gacgtcctgg tggccgatga ccccgccgcc ggcaccgcct cgacccagac
       61 ccaggccgcg tcctccgcca cccaggcgca gggcaagcag caggcccagg gcaaccaggc
      121 cgccggcacc accgagctgg cgcagcagca ggccgaggac atggccgcgc aattggccga
      181 caccggcgcc gccgtcaagg tgaacgtcaa ggtggacgac aaggccgccg ccgctgccgc
      241 cgacaccacc gcccagaccg atgccgccgc tgccgccgac ctggtggtcg cccaggtcgc
      301 cggcgccgag accgaggccg acgggcaggc ccagaccggc cagtcgcaga ccggccagaa
      361 ccagaacggc cagaacgcca acgccgccca gcaggtgctg cgcaacggcg cgctggagaa
      421 cgcccaggcg gcccagggca aggcgtcctc cgccaagccg ttcgccgccg ccctggcgca
      481 ggagaccggc tcgaccggtc aggccaccca ggccaacagc ggcaaccaga cccagaacgt
      541 ggccggcgtc aacgccgcca acgccaccca ggcgacccag aagaccgccc aggcccaggc
      601 cgcccaggcg ccgcagcagc cccgtcacgt cgatcccaag caggtggtcg atcagatcag
      661 cgtgcagatc agcaagcagg ccaaggacgg cggcgacacc atcaaggtgc agttgaagcc
      721 gaccgatctg ggttccatcg agatcaagct cgaggtccag gacggccgcg tcaccgccca
      781 cgtcaccgcc gacaacaagg acaccctggc cgccctgcag aaggacgccc gtggcctgga
      841 gaaggcgctg caggatgccg gcctcaagac cgagcagggc gcgctgacct tctcgctgtc
      901 caacgacaac aagcaggccc agcaggaagc gggccagcag ggcaagcccg gccgccgctc
      961 gcgcctggcc cgtgcccatg aagcttcaca gatcggcgcc gcgtccgccg cccagccgct
     1021 gcgtgccggc ggccgttcgg gcgtggacat ccgggtctaa gggggaacat cgccatgtcg
     1081 accatcgccg ccgccgcttc cgcctcgacc gcccaggacg ccgcccagtc gtccgtcagc
     1141 cgctcgaagc tggcccagaa cttcgacacc ttcctggtga tgctgaccac ccagctcaag
     1201 caccaggacc cgctgtcgcc catggactcg accgagttca ccaaccagtt ggtgcagttc
     1261 gccaacgtcg agcagcagat caacgccaac tcgaacatcg agaagctgat cggcgtcaac
     1321 cagatgaacc agcaggccat ggcgatcagc tatatcggcc gcaccgtcga ggccgactcg
     1381 acgctggtgc cgctgcaggg cggtggcgaa agccagaccg acaaggtcca gttgctgggc
     1441 ggcaagtcct acttcagcta cagcctggcg gaaaaggccg cctcggtgca ggtgaagatc
     1501 aaggacgccg acggcaacgt ggtgcgcacg ctcgacggca agaccgccca gggcaagaac
     1561 gaaatcgtgt gggacggcaa ggacaaggac aacgtccagt gcgtcgatgg gacctacacg
     1621 gtcgaggtcg cggccgtcaa ttcggccggc accgccatca acgccaccac gtcggcctac
     1681 acccgctcgg gcaaggcggg cttcagctac accctggccg aggacgccaa gaccatgcag
     1741 gtggtcatca aggacatgtc cggcgccatc gtgcgcaacc tcaccggccc cggcgacaag
     1801 ggccgccacg agatgcaatg ggacggcctc gacaaggacg gccgcccttg cgaggacggc
     1861 gcctacgcgc tggaagtggt cgcggtcgcc ggcgacggcg agaccgtgga agcggccacc
     1921 accgtctacg gccgcatcac cgacgtg
//
LOCUS       DATIKR010000512         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_68482, whole genome shotgun sequence.
ACCESSION   DATIKR010000512 DATIKR010000000
VERSION     DATIKR010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68482"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VLL76_07960"
     CDS             complement(<1..549)
                     /locus_tag="VLL76_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HSV29478.1"
                     /translation="MIGAGAASLPPLRDDLGLIPGPEARDGTPTWTIHDPVRNRYFRI
                     GHAAFELLARWHMGDPGRVLAEVRAEAGLALGQDAVEWMVRFLDGNHLLRRDGTAGIE
                     RLEATIAAGKVSWHSWLLHNYLFFRIPLVRPDHFLAATLSWVRPFYTRGFLYAALFAW
                     IAGLMLVVRQWDVFLATIPEFFT"
     gene            complement(546..>1532)
                     /locus_tag="VLL76_07965"
     CDS             complement(546..>1532)
                     /locus_tag="VLL76_07965"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV29479.1"
                     /translation="VLWMPLLKPDGQPAGALWLARDDAWGQEEIVLAERLADTYGHAW
                     GALSGPERKLPAWVKNRRVWGGAAAAVIVLFLLPVRQSALAPAVVTAAEPFVVAAPLD
                     GVVKDFHIRPNDVVAEGQKLLSIDDTELRTRQQVAAEELSVAQAELRKAEQGALSSAE
                     SAGQVALARAQVELKVAELAHAAELLARVEVKAERPGVAVFRNVNDWIGRPVRTGERI
                     LTLADPARVEIEAHLPVADAIVLEPGNDITLFLDADPLSPVDAVLADASYEAAQTEEG
                     ILAYRVRGVLAEGEASPRIGLRGTARIDGPRVPLFLYLFRRPIAAARHMVGL"
BASE COUNT          249 a          551 c          534 g          198 t
ORIGIN      
        1 cgtgaagaat tccgggatgg tggccaggaa cacgtcccat tgccgcacca ccagcatcaa
       61 gccggcgatc caggcgaaca acgcggcata gaggaagcca cgggtataga acggccgcac
      121 ccatgacagg gtggcggcca ggaagtggtc gggccgtacc agcgggatgc ggaagaacag
      181 gtaattgtgc agcagccagg aatgccacga caccttgccg gcggcgatgg tggcctcgag
      241 ccgctcgatc ccggcggtgc cgtcgcgccg cagcaggtgg ttgccgtcga ggaacctgac
      301 catccactcg accgcatcct ggcccaaagc cagccccgcc tcggcccgca cctcggcaag
      361 cacccgcccc gggtcgccca tgtgccagcg cgccaacaat tcgaaggcgg cgtggccgat
      421 gcggaaatag cggttgcgga cggggtcgtg gatggtccag gtcggcgtgc cgtcgcgcgc
      481 ctcgggtccc gggatcaggc ccaggtcgtc ccgcaacggc ggcagcgacg cggcgccggc
      541 gccgatcaca acccgaccat gtgccgcgcc gccgcgatgg gacggcggaa cagatacagg
      601 aacagcggca cgcgcgggcc atcgatgcgg gcggtgccgc gcaggccgat gcgcggcgat
      661 gcctcgccct cggccagcac gccgcgcacg cgataggcca ggatgccctc ctcggtctgc
      721 gccgcctcgt agctggcgtc ggccagcacg gcatccaccg gcgacagcgg gtcggcatca
      781 aggaacagag tgatgtcgtt gcccggctcc agcacgatgg cgtcggccac cggcagatgg
      841 gcctcgatct cgacgcgggc gggatcggcc agggtcagga tgcgttcgcc ggtgcggacc
      901 gggcggccga tccagtcgtt gacgttgcgg aagacggcga cgcccggccg ctcggccttg
      961 acctcgaccc gcgccagcaa ttcggcggca tgggccaact cggccacctt caattcgacc
     1021 tgggcacggg ccaaggcgac ctggccggcg ctttcggccg aactcaaagc cccctgctcc
     1081 gccttgcgca gttcggcctg ggccaccgac agttcctcgg ccgccacctg ctggcgggtg
     1141 cgcaattcgg tgtcgtcgat ggacagcagc ttctggccct cggccaccac gtcgttgggg
     1201 cggatgtgga agtccttgac cacgccgtcg agtggcgccg ccaccacgaa gggctcggcc
     1261 gccgtcacca ccgccggcgc caaggccgat tgccgcaccg gcagcaggaa cagcacgatc
     1321 accgcggccg cggcaccgcc ccacacgcgg cggttcttca cccaggcggg cagcttgcgt
     1381 tccgggccgg acagcgcgcc ccaggcatgg ccgtaggtgt cggccaggcg ttcggccagc
     1441 acgatttcct cttggcccca ggcgtcgtcc cgggccagcc acagcgcgcc ggcgggctgg
     1501 ccgtcgggct tgagcagcgg catccacagc ac
//
LOCUS       DATIKR010000513         6126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_31330, whole genome shotgun sequence.
ACCESSION   DATIKR010000513 DATIKR010000000
VERSION     DATIKR010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 6126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6126
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31330"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VLL76_07970"
     CDS             <1..913
                     /locus_tag="VLL76_07970"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV29480.1"
                     /translation="GKARPGIITFEGAMHGRTMGAALMGGNPGSRAWVGHDDPNLYRL
                     DFPTPWALGNMTGAERARRDLQALEARGIDLARDVCGILLETYQGWGAIFYPADYVQA
                     MADYARANNVLLTFDEIQSGFGRTGELFGYQHYGVEPDLICCGKGMSSSLPLAAVLGR
                     AEVMDLAEIGSMSSTHSANPLVCAAGLANIEVIEDENLVAEARRKGELLHQALDALRK
                     RWPKRISHVLGKGMVAAVLVVDPETGAADGASASRICELCLQRGLLLVHTGRESIKMG
                     PPLVTPDDALLEGVEVLAGAMADVFGG"
     gene            919..1353
                     /locus_tag="VLL76_07975"
     CDS             919..1353
                     /locus_tag="VLL76_07975"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV29481.1"
                     /translation="MIAVRHAGIVVEDLEAMLAFYVDGLGLAVAARADESGAFVEGLL
                     GLPGVRVTTVKLTGDDGPTLVELLCYRHPAPPPRRPLATNTPGPTHVAFTVSGLDSLH
                     ARLAAAGIAFNAQPRLSPDGRAKVAYCRDPEGNFVELVEMMP"
     gene            1350..2177
                     /locus_tag="VLL76_07980"
     CDS             1350..2177
                     /locus_tag="VLL76_07980"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HSV29482.1"
                     /translation="MTVAVGIMQGRLLPPFEGRFQTFPAEGWRDEFPRAQAAGLHCIE
                     WIYEVPHEADNPLGSDAGVAEMAALIERTGVRVRSICADYYMQRRLIGADGRADKAVA
                     EHLDWLIGRAALLGITYMVLPFVDASSLKTEDERAELATMLARLLPRAQAAGVELHLE
                     TDLPPDAFSALLSRVGHPFLKANYDIGNSASLGYDPNQELVALKPFLGSVHVKDRVRG
                     GGTVPLGTGNADFSSAFRRIREAGFDRWFILQAARNPDMDEVAWAAHNRAFVERWVG"
     gene            2179..2937
                     /locus_tag="VLL76_07985"
     CDS             2179..2937
                     /locus_tag="VLL76_07985"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29483.1"
                     /translation="MDLGLAGKSVLVGGASRGIGFAIARAFAAEGARVVLSARDPVQL
                     EQARAAIGGNAVAIAADLTVAAEVERVVAEAEATAPLTAVIPNVGSGRAPMGAQAGAA
                     EWERMLSLNLVGGVLLAEAALRRMMPRGEGCVTFVGSIAGSERIRAPIPYSAAKAALA
                     MAVKGYAAEAGPSGVRVNAVAPGNVLFPGSVWQRKLDEDAGAVARFLESEVPLRRLAT
                     PEEIADAVVFLTSPRSAFTTGSVLAVDGGQTRSV"
     gene            2948..3811
                     /locus_tag="VLL76_07990"
     CDS             2948..3811
                     /locus_tag="VLL76_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017332884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29484.1"
                     /translation="MTIGVPAPAPASVREAFDLSCRVAVITGGGGLLGRKHAEAVVEM
                     GGIAVLVDLDFHRAEEAASAVAAQFGGRAEAMACDITRPEAVEDLRAAVMERFGRVDI
                     LVNNAANNPKVEGGGLAGGHWSRLENFPLDIWNLDIAVGLTGAFLCSRAFGAEMATAG
                     RGVILNVASDLGLIAPDQRLYRKDGLADDEQPVKPVTYSVVKAGMIGLTRYLATYWAD
                     RGVRANAVAPGGVYAGQDPAFLARLAQLIPMGRMAHHDEYKATVAYLVSDASSYMTGA
                     VLAVEGGRTCW"
     gene            3971..5524
                     /locus_tag="VLL76_07995"
     CDS             3971..5524
                     /locus_tag="VLL76_07995"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HSV29485.1"
                     /translation="MANNISLSASMRSNLLALQSTSLLQDMTQDRLATGKKVNSALDN
                     PGSYFTAQSLNNRAADLSNRLDGIGQALQTLKETDKSLTSLTNLVEQAKALATQASEA
                     VNAAGLLSSLEASDVADLSVAGAAGSTVGQTVASVFTQMTAATTLTIMVNGGVSRTID
                     VSVAGTVTDLVTELNTELNQDGVQAYWDDTSKRIEFAAKEGTTLQFDNVGATGDAASE
                     LFGSALVGSANKYTFSAPASSDYAIRAFNGLAAADSFNVTVYDSNGATVAVTGVTIGA
                     TDSIASVVAAINAVNSNITATFNTSTNRIEFKGTAGYQLQLDDGTGSAAQELVGGGKV
                     GSTNKTTFGDATGNATVANKLEDFKVVMEQIDSLVADASYKGKNLLKGSDTLSVLFNE
                     DGSSKMTVNGVNFTHDSGLEFTKSSTLSWDSMGKIEASINQAKAAIDTIRSQQAKFGT
                     ANSVISTREDFTKNMVDTLKGGADKLVLADMNEEAANMLALQTQRSLATNSLTMASQA
                     AQSVLQLFR"
     gene            complement(5858..>6126)
                     /locus_tag="VLL76_08000"
     CDS             complement(5858..>6126)
                     /locus_tag="VLL76_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29486.1"
                     /translation="AGVTEPARLKGLNPLQVKAVLGKPVFTRRDAPAEIWQYRSRACT
                     LDVFLYDEKNGQSVAHVAVRSPQPMDEKDCFSDLTARSRGIPTS"
BASE COUNT          980 a         2103 c         2046 g          997 t
ORIGIN      
        1 cggcaaggcc cgcccgggaa tcatcacctt tgagggcgcc atgcacggcc gcaccatggg
       61 cgccgcgctg atgggcggca atcccggctc gcgggcctgg gtcggccacg acgatcccaa
      121 cctgtaccgc ctcgatttcc cgacgccctg ggccttgggc aacatgaccg gcgccgagcg
      181 ggctcgccgc gacctgcaag cgctggaagc gcgcggcatc gacctggcgc gcgacgtctg
      241 cggcatcctg ctggaaacct atcagggctg gggcgccatc ttctatcccg ccgactacgt
      301 ccaggcgatg gccgattatg cccgtgccaa caacgtgctg ctgacgttcg acgaaatcca
      361 atccggcttc ggccggacgg gcgagctgtt cggctatcag cattacggtg tcgagccgga
      421 cctgatctgc tgcggcaagg gcatgagctc gagcctgccc ctggcggccg tgctgggccg
      481 cgccgaggtg atggatctgg ccgaaatcgg ctccatgagc agcacccatt ccgccaaccc
      541 gttggtctgc gccgccggcc tcgccaacat cgaggtgatc gaggacgaga acctggtggc
      601 cgaggcccgc cgcaagggcg aattgttgca ccaggcgctc gacgccctgc gcaagcgctg
      661 gcccaagcgg atctcgcacg tcttgggcaa gggcatggtc gccgccgtgc tggtggtcga
      721 tcccgagacc ggcgccgccg acggcgcctc ggccagccgc atttgcgaat tgtgcctgca
      781 acggggtctg ctgctggtcc acacggggcg cgaatccatc aagatggggc cgccgttggt
      841 gacgcccgac gacgccctgc tggagggtgt cgaggtgctg gccggcgcca tggccgacgt
      901 gttcgggggc tgaccggggt gatcgccgtc cgccatgccg ggatcgtcgt cgaggacctg
      961 gaggccatgc tggccttcta cgtcgacggc ctgggcctgg cggtggccgc gcgagccgac
     1021 gaaagcggcg ccttcgtcga ggggctgctg ggcctgcccg gagtccgggt gaccacggtg
     1081 aagctgacgg gcgatgacgg gccgacgctg gtggaattgc tgtgctatcg ccatccggcg
     1141 ccgccacccc ggcggccgct ggcgaccaac acgcctggcc cgacccacgt ggcgttcacc
     1201 gtctccggcc tcgactccct gcatgcgcgg ctcgctgccg ccggcatcgc gttcaacgcg
     1261 cagccgcgcc tgtcccccga tggccgcgcc aaggtcgcct attgccgcga ccccgagggc
     1321 aatttcgtcg aactggtgga gatgatgccg tgaccgtcgc ggtgggaatc atgcaggggc
     1381 ggctgctgcc gccgttcgag ggccgcttcc agaccttccc ggccgaaggc tggcgcgacg
     1441 agttcccccg tgcccaggcc gccggcctgc attgcatcga gtggatctac gaggtcccgc
     1501 acgaggccga caatcccctg ggcagcgatg ccggtgtcgc cgagatggcg gcgctgatcg
     1561 agcggaccgg cgtgcgggtg cggtcgatct gcgccgatta ttacatgcag cgacgcctga
     1621 tcggcgccga cggccgcgcc gacaaggcgg tggccgaaca cctggactgg ctgatcggcc
     1681 gcgccgcgct gctgggcatc acctacatgg tgctgccgtt cgtcgacgcc tcgtcgctga
     1741 agacggagga cgagcgcgcc gagttggcca caatgctggc ccgcctgctg ccgcgcgccc
     1801 aggccgccgg ggtcgaattg cacctggaaa ccgacctgcc gcccgacgcc ttctcggccc
     1861 tgctgtcgcg tgtcggccat cctttcctca aggccaatta cgacatcggc aacagcgctt
     1921 cgctgggcta cgaccccaac caggaactgg tggcgctgaa gcccttcctg ggcagcgtcc
     1981 acgtcaagga ccgggtgcgg ggcggcggca cggtgccgct gggcaccggc aacgccgact
     2041 tctcctcggc cttccgccgc atccgcgagg ccggcttcga ccgctggttc atcctgcagg
     2101 cggcccgcaa cccggacatg gacgaggtcg cctgggccgc ccacaaccgc gccttcgtcg
     2161 agcgctgggt gggctgacat ggatctggga ctcgccggca agagcgtgtt ggtcggcggc
     2221 gccagccgcg gcatcggctt cgccatcgcc cgcgccttcg ccgccgaggg cgcccgcgtg
     2281 gtgctgtcgg cccgcgaccc ggtccaactg gagcaggccc gcgccgccat cggcggcaat
     2341 gccgtcgcca tcgccgccga cctgaccgtc gcggccgagg tcgagcgggt ggtggccgag
     2401 gcggaggcga cggcgccgct cactgccgtg atccccaacg tcggcagcgg ccgcgcgccc
     2461 atgggggccc aggccggtgc cgccgaatgg gagcgcatgc tgtcgctgaa cctggtgggc
     2521 ggcgtcctgc tggcggaagc ggcgttgcgt cgcatgatgc cgcgcggcga gggctgtgtg
     2581 acgttcgtcg gctccatcgc cgggtccgag cgcatccgcg cccccattcc ctattccgcc
     2641 gccaaggccg ccctggccat ggcggtcaag ggctatgccg ccgaggccgg gccgtcgggc
     2701 gtgcgcgtca acgccgtcgc ccccggcaac gtgctgttcc ccggcagcgt gtggcagcgc
     2761 aagctggacg aggatgccgg cgccgtcgcc cgcttcctcg aatccgaggt gccgctgcgc
     2821 cgtctcgcca cccccgagga gatcgccgac gcggtggtct tcctgacctc gccgcgttcg
     2881 gccttcacca ccggcagcgt gctggcggtg gacggcggcc agacccgttc cgtttaagga
     2941 gtcttccatg accatcggcg ttcccgctcc cgcaccggcc agcgtgcgcg aggccttcga
     3001 cctgtcctgc cgcgtcgcgg tcatcaccgg cggcggcggt cttctgggcc gcaagcatgc
     3061 cgaggcggtg gtcgagatgg gcggcatcgc cgtgctggtg gacctcgact tccaccgtgc
     3121 cgaggaggcc gccagcgccg tggccgccca attcggcggc cgcgccgagg cgatggcctg
     3181 cgacatcacc cggcccgagg cggtcgagga cctgcgcgcc gccgtgatgg agcggttcgg
     3241 ccgcgtcgac atcctggtca acaacgccgc caacaatccc aaggtcgaag gcggcggcct
     3301 ggccggcggc cattggtcgc ggctggagaa tttcccgctc gacatctgga acctggacat
     3361 cgccgtcggc ctgaccggcg ccttcctgtg ctcgcgcgcc ttcggggccg agatggcgac
     3421 ggcgggcagg ggggtgatcc tcaacgtcgc ctccgacctc ggcctgatcg cccccgacca
     3481 gcggctatac cgcaaggacg ggctggccga cgacgagcag ccggtcaagc cggtgaccta
     3541 ttccgtggtc aaggccggca tgatcggcct gacccgctat ctcgccacct actgggccga
     3601 tcgcggcgtg cgcgccaacg cggtggcgcc gggcggcgtc tatgccggcc aggaccccgc
     3661 cttccttgcg cggcttgcgc agctgatccc catggggcgc atggcgcacc acgacgaata
     3721 caaggccacg gtggcgtatc tggtgtcgga cgcgtcgtcc tacatgaccg gcgcggtgct
     3781 ggcggtcgag ggcgggcgga cctgctggta acgtgggttt tacgaacaat taatctttat
     3841 tttatggagg cttaaccgtt tcaagagggg gtgcgaatga tgttgcggcc acccctaaag
     3901 agtgctagcg tctcttcata ggccaagaac ggccatcgcc aactagtgac tctagaaacg
     3961 gagttttatc atggctaaca acatttccct gtccgcgtcg atgcgttcca acctgctggc
     4021 gctgcagagc accagcttgc tgcaggacat gacgcaggac cgtctggcga ccggcaagaa
     4081 ggtcaacagc gccctggaca atccgggcag ctacttcacc gcccagtcgc tgaacaatcg
     4141 cgccgccgac ctgtccaacc gcctcgacgg catcggccag gcgctgcaga ccctcaagga
     4201 aaccgacaag tccctgacct cgctgaccaa cctggtcgag caggccaagg ccctggcgac
     4261 ccaggcgtcg gaagcggtga acgccgccgg cctgctcagc tcgctcgaag ccagcgatgt
     4321 cgccgacctg tcggtcgcgg gtgccgcggg ttcgaccgtc ggccagaccg tcgcgtcggt
     4381 ctttacccag atgaccgctg ccaccaccct gaccatcatg gtcaacggcg gcgtcagccg
     4441 taccatcgat gtcagcgtgg cgggcactgt gaccgatctg gtcacggagc tgaacaccga
     4501 actcaatcag gacggcgtcc aggcttactg ggatgacacc agcaagcgca tcgaatttgc
     4561 cgccaaggaa ggcaccaccc ttcagttcga caacgtcggt gcgacgggcg acgccgccag
     4621 cgagttgttc ggttcggccc tggtcggttc ggccaacaag tacaccttct cggctccggc
     4681 cagctcggat tatgccatcc gtgccttcaa cggtctggcg gccgccgaca gcttcaatgt
     4741 gaccgtctat gactcgaacg gtgccaccgt cgccgttacc ggcgtcacca tcggtgcgac
     4801 ggactccatc gcgtcggtcg tggccgccat caacgccgtg aattccaaca tcaccgcgac
     4861 cttcaacacc tcgaccaacc gcatcgagtt caagggtacc gccggttatc agctccaact
     4921 ggatgatggc accggcagcg cggcccagga actggtcggt ggcggcaagg tcggctccac
     4981 gaacaagacc accttcggcg acgcgaccgg caacgcgacc gtggcgaaca agctcgaaga
     5041 cttcaaggtc gtcatggagc agatcgactc gctggtcgcc gacgccagct ataagggcaa
     5101 gaacctgctg aagggcagcg acaccctgtc ggtgctgttc aacgaagacg gttcgtcgaa
     5161 gatgacggtc aacggcgtga acttcactca cgacagcggc ctggagttca ccaagtcgag
     5221 caccctgtct tgggacagca tgggcaagat cgaggcttcg atcaaccagg ccaaggccgc
     5281 gatcgacacc atccgctcgc agcaggccaa gttcggtacc gcgaacagcg tgatctcgac
     5341 ccgcgaggac ttcaccaaga acatggtgga caccctgaag ggcggcgcgg acaagctggt
     5401 cctggccgac atgaacgagg aagccgccaa catgctggct ctgcagaccc agcgcagctt
     5461 ggcgaccaac tcgctcacca tggcctcgca ggccgctcag agcgtgctgc agctgttccg
     5521 ctaaacagcg gatcgctgaa gtggttggga aggggcgccg caaggcgccc ctttcttttt
     5581 ggtgcatcgc ggattcgcgg ggaaggtgtc tgcgtccttc cgtcatgccc gtatcaagca
     5641 cgccgctggt ttaggatcag gccagccttg aggcgctcat cgcgtggtga atgggagatt
     5701 caccacagag acacagaggc acagagagac cgtgcagact tcaaagtctg cgcccatctc
     5761 caagcctcat ggcgtggatg ggaggaagaa tgcatccgtc cgcacgacat ctctgtgtct
     5821 ctgtgcctcc gtggtgaatt cccttgtccg cttcaggcta gctggtgggg atgccccggc
     5881 tgcgggcggt caggtccgag aagcagtcct tctcgtccat cggctgcggg ctgcgcaccg
     5941 ccacgtgggc gaccgactgg ccgttctttt cgtcgtaaag gaagacgtcc agggtgcagg
     6001 cgcggctgcg gtattgccag atttcggccg gggcgtcgcg gcgggtgaac accggcttgc
     6061 ccagcaccgc cttgacctgc agcgggttca agcccttcag ccgcgccggt tcggtgacgc
     6121 cggcgg
//
LOCUS       DATIKR010000514         1872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_80631, whole genome shotgun sequence.
ACCESSION   DATIKR010000514 DATIKR010000000
VERSION     DATIKR010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80631"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1073)
                     /gene="ybgF"
                     /locus_tag="VLL76_08005"
     CDS             complement(81..1073)
                     /gene="ybgF"
                     /locus_tag="VLL76_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HSV29487.1"
                     /translation="MRRIALSTALAAILALGFGVAPAHAQYDNNRALYDRIDRLERDL
                     QVMQQNVSRGGGGSTVIRSPAAGGGTTYSGAEPAPMPSGMAARLDDRVDMMEDQIRQL
                     TGKIEEANFKAQQALKQMERLQADIDLRFKDLQAGQGAAAQPQQPAIAMPGPGAAPTL
                     TPPKSLGGNAADGTGPAPGPQVLGAMPEKDLKKALQQQPAAPKDAQGMYDEAFAAAQR
                     GDYANAERGFQAFLDANPKHQLAGNASYWMGDIAYMKKDYGTAASTFLEAYKKYPKHP
                     KLPDMMYKAGSAFGQMGKKKEACTAFGYLFKEHPDMPDRVKRAATAEKQKYECK"
     gene            complement(1234..1725)
                     /gene="pal"
                     /locus_tag="VLL76_08010"
     CDS             complement(1234..1725)
                     /gene="pal"
                     /locus_tag="VLL76_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HSV29488.1"
                     /translation="MKLRFLSIFAAVALVAACESAPEDTGAKAGTGQTPPASTKSQIV
                     PGSEQDFIANVGDRVFFDFDKYSLRSDAKATLDKQAAWLKKYPNYSLTVEGHADERGT
                     REYNLALGERRANSVKEYLVANGLPASRVKTVSYGKERPVALGSNEAAWSQNRRGVTV
                     LGK"
BASE COUNT          295 a          580 c          659 g          338 t
ORIGIN      
        1 tgggcatggc aagcagtctc cgctcaacga aatggccggg tcaagcccgg ccatcttgcg
       61 agagcgaaag ggccaaggcc ctatttgcac tcgtatttct gcttttcggc ggttgccgcg
      121 cgcttgacgc ggtcgggcat gtccgggtgt tccttgaaca gatagccgaa ggccgtgcag
      181 gcctccttct tcttgcccat ctggccgaac gccgaacccg ccttgtacat catgtcgggc
      241 agcttgggat gcttgggata cttcttgtac gcctcgagga aggtggacgc ggcggtgccg
      301 taatccttct tcatataggc gatgtcgccc atccagtagc tggcgttgcc ggccaactga
      361 tgcttggggt tggcgtccag gaaggcctgg aagccgcgct cggcgttggc gtagtcgcca
      421 cgctgggcgg ccgcgaaggc ctcgtcgtac atgccctggg cgtccttggg agcggcgggc
      481 tgctgctgca gcgccttctt gaggtccttc tcgggcatgg cgcccagcac ctgcgggccg
      541 ggggccgggc cggtgccgtc ggcggcattg ccgcccaggg atttcggcgg ggtcagcgtg
      601 ggcgcggcgc cggggccggg catggcgatt gcgggctgct gcggctgggc ggcggcgccc
      661 tggccggcct gcagatcctt gaagcgcagg tcgatgtccg cctgcagccg ctccatctgc
      721 ttcagcgcct gctgcgcctt gaaattggct tcctcgatct tgccggtgag ctggcggatc
      781 tggtcttcca tcatgtcgac gcggtcgtcg aggcgggcgg ccatgcccga cggcatcggc
      841 gccggctcgg cgccggaata ggtggtgccg ccgccggccg ccggcgagcg gatgaccgtg
      901 gagccgccgc cgccgcgcga aacgttctgc tgcatgacct gcaggtcgcg ttcgagacgg
      961 tcgatgcggt cataaagggc gcggttgttg tcgtactggg cgtgggcggg ggcaaccccg
     1021 aaaccaaggg ccaggatcgc ggcgagcgcg gtcgagagag cgatgcgacg cacgggccaa
     1081 cctcgtgtcg aacggcgccc cacaagcggg cgcgcggatg tcaccgggat aggatcaaac
     1141 atgggcaaaa ataaggcgcc cgcccgttcc gaaaggccat atcggccaat cggaagggcg
     1201 ggcgccccca ctttcacgtg gtgatcggca gaattacttg ccgagcacgg tcacgccacg
     1261 gcggttctgc gaccaggccg cctcgttcga gccgagggca accgggcgct ccttgccgta
     1321 ggagacggtc ttgacgcgcg aggccggcag gccattggcg accagatact ccttcaccga
     1381 gttcgcacga cgctcgccca gggcgaggtt gtactcacgg gtgccgcgct cgtcggcatg
     1441 accttcgacg gtcagggagt agttcgggta cttcttcagc caagcggcct gcttgtccag
     1501 ggtcgccttg gcgtccgaac ggaggctgta cttgtcgaag tcgaagaaga cgcgatcgcc
     1561 gacgttggcg atgaagtcct gctccgagcc cggaacgatc tggctcttgg tcgaggcggg
     1621 cggggtctgg ccggtaccgg ccttggcgcc ggtatcctcc ggggcggact cacaagccgc
     1681 gaccagggcg acggcggcga agatgctcag gaaacgcagt ttcatagctt gaggactccc
     1741 cctcaatgga acgcggatgg gaatgccgat tggaccttgg tgatatcgag gcagccttgc
     1801 ggccgcctcc tctctaccgg tgtcaccgac tgataggacc cagtaacacc ggaaaaaatc
     1861 ctaatcggcg cg
//
LOCUS       DATIKR010000515         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_225863, whole genome shotgun sequence.
ACCESSION   DATIKR010000515 DATIKR010000000
VERSION     DATIKR010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225863"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..120)
                     /locus_tag="VLL76_08015"
     CDS             complement(<1..120)
                     /locus_tag="VLL76_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HSV29489.1"
                     /translation="MARRRQIYEGKAKVLFEGPEPGTLVQYFKDDATAFNNKKK"
     gene            complement(259..1005)
                     /locus_tag="VLL76_08020"
     CDS             complement(259..1005)
                     /locus_tag="VLL76_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HSV29490.1"
                     /translation="MCTLIILRVPTRDWPVLVAANRDEMAGRPWDPPGRHWDDRPEVV
                     AGRDRLAGGAWLGLNDHGVVAAILNRVGTLGPQAGKRSRGELVLEALDHADAVEAAGA
                     LSHLDGRAYRPFNMVVADNRDAFWVRADGGPRVRVVPVADGLHMLTALDLDDPASPRV
                     AAYLPRFRAARRPDPASGDWAAWQKLLADPGSGADGEEMPAMCFTRSDGFGTVSSSLI
                     ALPAMGLEAKPSWLFAAGRPDRATFTPVGA"
     gene            1120..1446
                     /locus_tag="VLL76_08025"
     CDS             1120..1446
                     /locus_tag="VLL76_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HSV29491.1"
                     /translation="MTTFDDRERAFEAKYRLDQEVAFKVNMRRDKLLGLWAAEKFGLS
                     GDAAKAYALSVVDAEFSEPDHDVGHKVMRDFVERGVAMDEDDLRREMGRLLEVARTQI
                     FDEIKK"
     gene            complement(1478..>2187)
                     /locus_tag="VLL76_08030"
     CDS             complement(1478..>2187)
                     /locus_tag="VLL76_08030"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29492.1"
                     /translation="MRETVAELKRSNAELEQFAYVVSHDLREPLRMVTAYAQLLGRRY
                     AGQLDADGEEFLHYVTDGARRMERLIDDILAFSRVGRCAVPPSGFESGDALQTVLDDL
                     RPAIAETGAEVMVGPMPAIVADRGQIERLFENLLANALKYRDPERPLRITVSGEEAST
                     IWQFSVADNGIGIDSADFDRIFMVFERLHGREVPGTGLGLAICKKIVERHGGRIWVDS
                     ALGAGSTFHLTLARREP"
BASE COUNT          378 a          710 c          758 g          341 t
ORIGIN      
        1 cttcttcttg ttgttgaagg cggtggcgtc gtccttgaag tactggacca gggtgccagg
       61 ctcggggccc tcgaacagga ccttggcctt gccttcgtaa atctgtctgc gtcgggccat
      121 ggggaacatt ccggataaaa aatgcgcggc tgtggcgcgc gggaagggag cgcgcgggcg
      181 gctcccggaa tcgattcaag gcttgatata gcagggatgg acgggtgaga caacgaaggt
      241 ctgtccgccc ggaaggggtt aagcgcccac gggtgtgaac gtcgcgcggt cgggccggcc
      301 ggcggcgaac agccaggacg gcttcgcctc caagcccatg gcgggcaggg cgatcagcga
      361 gctcgacacc gtgccgaagc catcggagcg ggtgaaacac atggccggca tctcctcgcc
      421 gtcggcgccg ctgccgggat cggccagcag cttctgccag gccgcccagt cgcccgaagc
      481 cgggtcggga cgccttgccg cccggaagcg cggcagatag gcggcgacgc gcgggctggc
      541 gggatcgtcg agatccagcg cggtcagcat gtgcaggccg tcggcgacgg gcaccacccg
      601 aacgcgcggg ccgccgtcgg cgcggaccca aaaggcgtcg cggttgtcgg ccaccaccat
      661 gttgaacggg cgataggcgc ggccgtccag gtgcgacagg gcgccggcgg cctcgaccgc
      721 gtcggcgtgg tccagcgcct ccagcaccag ctcgccgcgc gaccgcttgc ccgcctgcgg
      781 ccccagcgtt cctacccgat tgagtatggc cgcgaccacg ccatggtcgt tgagtcccag
      841 ccacgccccc cccgccagac ggtcgcgtcc ggcgaccacc tcggggcggt cgtcccagtg
      901 gcgacccggc ggatcccatg gccggccggc catttcgtcg cggttggcgg cgaccaggac
      961 gggccaatca cgggtcggaa cgcggaggat gattaacgtg cacatgcaaa aatccgattc
     1021 ctacccgggc gatacgccgc tataacacgt ccgccgccat ggcatcaggt tcaaacgaca
     1081 accactttca tatggtgggc agagggaagc taacgcatca tgacgacgtt cgatgaccgt
     1141 gagagggcgt tcgaggccaa gtatcgcctg gaccaggagg tcgcgttcaa ggtgaacatg
     1201 cgccgcgaca agctgctcgg tctgtgggcg gccgaaaagt tcggcctttc gggcgacgcc
     1261 gccaaggcct atgccctgtc ggtggtggac gccgaattct ccgagcctga ccacgacgtc
     1321 ggccacaagg tgatgcgcga cttcgtcgag cgcggcgtcg ccatggacga ggacgacctg
     1381 cgccgcgaga tgggccgcct gctggaagtg gcgcgcaccc agatcttcga cgagatcaag
     1441 aagtagagat cgctgcgcca tctgacctcc tggcaattta cggctcacgc cgcgccaggg
     1501 tcagatggaa ggtcgagccg gcgcccaacg cgctgtctac ccagatgcgg ccgccgtgcc
     1561 gctcgacgat cttcttgcag atggccaggc ccaggccggt tcccggcacc tcgcggccgt
     1621 gcaggcgctc gaacaccatg aagatgcggt cgaaatcggc cgaatcgatg ccgatgccgt
     1681 tgtcggccac cgaaaactgc cagattgtgg acgcctcctc gcccgatacc gttatgcgca
     1741 acggacgctc ggggtccctg tatttcaggg cgttggcgag caaattctcg aacaggcgct
     1801 cgatttgccc gcgatcggcg acgatggcgg gcatggggcc gaccatgacc tcggcgccgg
     1861 tctcggcgat ggcggggcgc aggtcgtcga gcacggtctg caaggcgtcg ccgctttcga
     1921 acccgcttgg cggaacggcg cagcggccga cgcgggaaaa ggccaggatg tcgtcgatca
     1981 ggcgctccat gcggcgggcg ccgtcggtga cgtaatgcag gaattcctcg ccgtcggcgt
     2041 ccagttggcc ggcatagcgg cggcccagca attgggcata ggcggtgacc atgcgcagcg
     2101 gctcgcgcag gtcgtgcgac accacatagg cgaattgctc cagttccgcg ttcgaccgtt
     2161 tcaactcggc gacggtctcg cgcatcg
//
LOCUS       DATIKR010000516         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_7561, whole genome shotgun sequence.
ACCESSION   DATIKR010000516 DATIKR010000000
VERSION     DATIKR010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7561"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VLL76_08035"
     CDS             <1..201
                     /locus_tag="VLL76_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV29493.1"
                     /translation="IKRVVRLTAFVACAQHFTDQPKVVNGASDLMVEVLGDAGRHARV
                     AVGAPSLPLNAAVEIEGVFEIG"
     gene            complement(319..1566)
                     /locus_tag="VLL76_08040"
     CDS             complement(319..1566)
                     /locus_tag="VLL76_08040"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29494.1"
                     /translation="MATSLPPSGAAGAGSVPGGGGSAGSADVATSSSFPPFPPELVQV
                     EGTARDDVLIGDADNEEMTAFRGDDVLFGGAGDDRLDGGIGDDRLEGGPGWDSYDGGP
                     GRDTLSFHTGQTSAFVDLSTGSVMLADTFEFVLEVENLTGSDFGDTLLGDDEDNVLAG
                     GGGLDLLGGGLGDDRLDGGADGAYATWAGQDGAVLVDLAAGRATEWDGGVDALVDILG
                     AVGTDHDDTLLGNGQGNRLEGGLGDDRLDGRAGDDVLVGGDGIDILIGGAGTDLVDYS
                     GGDAVRVNLLAGEAFDESGGATDTLTGIEDVLGSLGRDTLVGDDRANRLEGSVGRDIL
                     RGNGGDDTFVFADRLDFGDTIEDFGAGDTIEVARAAVGPDGRVVFDAGGDRLLLDPGG
                     DAALVVIATVLGGNPSAADVVLV"
BASE COUNT          242 a          605 c          556 g          234 t
ORIGIN      
        1 atcaagcggg tcgtccgcct gaccgccttc gtcgcctgcg cgcagcattt caccgaccag
       61 cccaaggtgg tcaacggcgc ctcggacctg atggtcgaag tgctgggcga tgccggccgc
      121 cacgcccgcg tggccgtggg cgcgccgtcg ctgccgttga acgcggcggt cgagatcgag
      181 ggagtgttcg agatcgggtg agatcgcggg agaaggtgcc tgttaccttc cgtcatgccc
      241 gtgctccccg ggctgaacag tcaagtccgg gcatgacgga taagggcctg caaactttaa
      301 acctgggtcc gcagcctgct aaaccagcac cacatccgcc gccgaggggt tgccgcccag
      361 cacggtggcg atcaccacca gggcggcatc gccgccggga tcgagcagca ggcggtctcc
      421 gccggcatcg aacaccaccc gcccgtccgg gccgaccgcc gcgcgggcga cctcgatggt
      481 gtcgccggcg ccgaaatcct cgatggtgtc gccgaaatcc aggcggtcgg cgaacacgaa
      541 ggtgtcgtcg ccaccgttgc cgcgcaggat gtcccggccg accgagcctt ccagccggtt
      601 ggcgcggtcg tcgcccacca gggtgtcgcg gcccagcgac cccagcacgt cctcgatgcc
      661 ggtgagcgtg tcggtggcgc cgccggattc gtcgaaggcc tcgccggcca gcaggttgac
      721 gcgaacggcg tcaccacccg aataatccac cagatcggtg ccggcgccgc cgatcaggat
      781 gtcgatgccg tcaccgccca ccagcacgtc gtcgccggcc cggccgtcca ggcggtcgtc
      841 gcccaggccg ccctccagcc ggttgccctg gccgttgccg agcagggtgt cgtcatggtc
      901 ggtgccgacc gctcccagta tgtccaccag ggcatcgaca ccgccgtccc attccgtcgc
      961 ccgcccggcc gccaggtcca ccagcacggc gccgtcctgg ccggcccagg tggcgtaggc
     1021 gccatcggcg ccgccgtcga ggcggtcgtc gcccaggccg ccgcccagca ggtcgaggcc
     1081 gccgccgccg gccagcacat tgtcctcgtc gtcgcccagc agggtgtcgc cgaaatccga
     1141 gccggtgagg ttctcgacct ccaggacgaa ttcgaaggtg tcggccagca tgaccgaacc
     1201 ggtggacagg tcgacgaagg ccgaggtctg gccggtgtgg aagctcagcg tgtcgcggcc
     1261 ggggccgccg tcatagctgt cccagcccgg cccgccctcg agccggtcgt cgccgatgcc
     1321 tccgtccagg cggtcgtcac cggcgccgcc gaacagcacg tcgtcgccac ggaaggcggt
     1381 catctcctca ttgtcggcgt cgccgatcag cacgtcgtcg cgggcggtgc cttcgacctg
     1441 caccagttcg ggcggaaaag gcggaaaact ggagctggtc gccacgtcgg ccgatccggc
     1501 cgagccgccg ccacccggca cgcttccggc tccggccgcg cccgacgggg gtagagaggt
     1561 cgccatcgca ccctccttcg ctgatctcgc caacaaaggt ggagcgccgg atggccggca
     1621 accactcgtc aggtggg
//
LOCUS       DATIKR010000517         2857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_68524, whole genome shotgun sequence.
ACCESSION   DATIKR010000517 DATIKR010000000
VERSION     DATIKR010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2857
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68524"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1758)
                     /locus_tag="VLL76_08045"
     CDS             complement(<1..1758)
                     /locus_tag="VLL76_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HSV29495.1"
                     /translation="MAKSNSFIDNLGKIYAYYTGGFVGFTILLAILEQLGVPNKIIGY
                     AFIFLTVGVYALIGVLSRTAEVSEYYVAGRVVPAFYNGMATGADWMSAASFIGMAGTL
                     YMLGYDGLAFVLGWTGGYVLVAVLLAPYLRKFGQFTVPDFLGARYGGNVARLLGVIVL
                     ITASFAYVVAQIFGVGIIASRFLGISFELAVFVGLAGILVCSMLGGMRAVTWTQVAQY
                     IILIVAYLIPVVWMSAKVTGVPIPQLMYGQALQKIAALEPTLGVVKGHAAAFVDAKGQ
                     FDMTSAINFFLLIGCLMIGTASLPHILMRYFTTPSVKQARQSVGWSLFFIFLLYFTAP
                     SYAAFAKLEVYQNIIGLSIDQLPQWVRAWGQVGLVGACDAANAAQTYVMCKDVVGNGD
                     GILQLKEFKIHTDAIVLATPEIAGLPYVVAGLVAAGGLAAALSTADGLLLAIANALSH
                     DVYYRMIDPKADTKKRLIASRVLLIGVAIVAAYVASLKPSTILAMVAWAFSIAASGLF
                     PALVMGVWWKRTTSAGAIAGMIVGFGVCLYYLISTQFYGAPLWFGIKNISCGAFGIPA
                     AFLTTIVVSLFTPAPSKQMQ"
     gene            complement(1772..2041)
                     /locus_tag="VLL76_08050"
     CDS             complement(1772..2041)
                     /locus_tag="VLL76_08050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4212 domain-containing protein"
                     /protein_id="HSV29496.1"
                     /translation="MSNQPLTPERAKEYWNRTSTLMWTMLAIWFLAGFVVHFFAPTLN
                     TISFLGFPLGFYMAAQGSLIIFVVAIFWYASKQNSIDEEFGVADE"
     gene            2389..>2857
                     /locus_tag="VLL76_08055"
     CDS             2389..>2857
                     /locus_tag="VLL76_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29497.1"
                     /translation="MADFIGTETARIAQKATTGYCRTKAGANVELLFKEQTFLEALEV
                     SRWGAFGLVLADICLVAEGFLRPFARGREDDLAAWIVSVFDGHCAANPRPGAEGDGWA
                     AEKAEFRSRLARSRLAEPIPAANVGFDTAQRIYDALPVHPSLRREDFELVQNLT"
BASE COUNT          568 a          875 c          942 g          472 t
ORIGIN      
        1 ctgcatctgc ttgctcggcg caggggtgaa caggctcacc acgatggtgg tcaggaacgc
       61 cgcggggatg ccgaaggcac cgcacgagat gttcttgatg ccgaaccaca gcggcgcgcc
      121 atagaactgc gtcgagatca ggtaatacag gcagacgccg aagcccacga tcatgccggc
      181 gatggcgccg gccgaggtgg tgcgcttcca ccacacgccc atcaccaggg ccgggaacag
      241 gcccgacgcg gcgatcgaga acgcccacgc caccatcgcc aggatggtcg acggcttcag
      301 cgaggcgaca taggccgcca cgatggccac gccgatcagc agcacgcggc tggcgatcag
      361 acgtttcttg gtgtcggcct tggggtcgat catgcggtag tagacgtcgt gcgacagcgc
      421 gttggcgatg gccagcagca gaccgtcggc ggtggacagc gcggcggcga gaccgccggc
      481 ggccaccagg ccggccacca catagggcag gccggcgatt tccggagtcg ccaacacgat
      541 ggcgtcggta tggatcttga actccttcag ctgaaggatt ccgtcaccat tgccgaccac
      601 gtccttgcac atgacgtagg tctgggcggc gttcgcggcg tcgcaggcgc cgaccaggcc
      661 gacctggccc caggcacgga cccattgcgg caactggtcg atcgagaggc cgatgatgtt
      721 ctggtagacc tcgagcttgg cgaaagccgc gtacgagggg gcggtgaagt acagcaggaa
      781 gatgaagaac agcgaccagc ccaccgactg acgggcctgc ttcaccgacg gcgtggtgaa
      841 gtagcgcatc aggatgtgcg gcagcgaggc cgtgccgatc atcaggcagc cgatcaacag
      901 gaagaagttg atggccgagg tcatgtcgaa ctggcccttc gcatcgacga aggcggcggc
      961 atggcccttg acgacgccca gcgtgggctc gagcgcggcg atcttctgca gcgcctggcc
     1021 gtacatgagc tgcggaatgg gaacgccggt caccttggcc gacatccaca ccaccgggat
     1081 caggtaggcg acgatcagga tgatgtactg ggccacctgg gtccaggtca ccgcgcgcat
     1141 gccgcccagc atcgagcaca ccaggatgcc ggccaggccg acgaacacgg ccagctcgaa
     1201 cgagatgccc aggaagcgcg aggcgatgat gccgacgccg aagatctggg ccaccacgta
     1261 ggcgaaggac gcggtgatca gcacgatgac gcccaaaagg cgggcgacgt tgccgccgta
     1321 gcgggcgccc aggaagtcgg gcaccgtgaa ctggccgaac ttgcgcaggt agggggcgag
     1381 aagcaccgcc accagcacgt agccgccggt ccagccgagc acgaaggcca ggccgtcata
     1441 gcccagcatg tagagcgtgc cggccatgcc gatgaacgac gcggcgctca tccagtcggc
     1501 gccggtcgcc atgccgttgt agaacgccgg caccacgcgg ccggccacgt aatactccga
     1561 cacctcggcg gtgcgggaga ggacgccgat cagcgcgtag acgccgacgg tcaggaagat
     1621 gaacgcgtaa ccgatgatct tgttggggac gcccaactgc tcgaggatcg cgagcaggat
     1681 ggtgaacccg acgaagccgc cggtgtagta ggcgtagatc ttgcccaggt tgtcgatgaa
     1741 gctgttgctc ttggccatgg gacgtcccct cctattcgtc ggcgacgccg aactcttcgt
     1801 cgatgctgtt ctgcttgctg gcgtaccaga agatcgcaac aacgaagatg atcagggagc
     1861 cctgggcggc catgtagaag cccagcggga agcccaagaa gctgatggtg ttcagcgtgg
     1921 gcgcgaaaaa atgcaccacg aagccggcca ggaaccagat cgccagcatc gtccacatca
     1981 gggtggacgt gcggttccag tattccttgg cgcgctcggg cgtcaaaggc tgattcgaca
     2041 tctcgttcgt ctccttttcc tcgttttatc gctacggccg attggctcga ccttattttc
     2101 attagcgaca tttattatta tgattgggcg gtcgctcgga tgaagaaacc ttccccttgg
     2161 gtgcggttgc gtccctcttc cgaatgatgc tgactttatg ccattgtcgg ctttgataac
     2221 atccaagcaa catgataaca agcacatagc ggtgtttcat caagtccggg gtagctaccc
     2281 ctaacgtcag atatggtggg gccaacccgc cagcgggagg tccgaaagtt catgttgaaa
     2341 gcaatattcg atatgtttgc atctggtcga attgctgcgc ctgcgaagtt ggccgacttt
     2401 atcggcacag aaacggcacg gatcgcccag aaggccacga ccggctattg ccgcaccaag
     2461 gccggcgcca acgtcgagct gctgttcaag gagcagacct tcctggaagc cctcgaagtg
     2521 tcgcgctggg gcgccttcgg cctggtgctg gccgacatct gcctggtggc ggaaggcttc
     2581 ctgcgtccgt ttgcccgggg gcgcgaggac gacctggcgg cctggatcgt gtcggtgttc
     2641 gacggccatt gcgcagccaa cccgcgaccc ggcgccgagg gtgacggctg ggccgccgaa
     2701 aaggccgagt tccggtcccg cctggcgcgc tcgcggctgg ccgagccgat tcccgccgcc
     2761 aacgtgggct tcgacacggc gcaacgcatc tacgatgcgc tgccggtgca tcccagcctg
     2821 cggcgcgagg atttcgagct ggtgcagaac ctgaccc
//
LOCUS       DATIKR010000518         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_68530, whole genome shotgun sequence.
ACCESSION   DATIKR010000518 DATIKR010000000
VERSION     DATIKR010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68530"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            140..925
                     /locus_tag="VLL76_08060"
     CDS             140..925
                     /locus_tag="VLL76_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29498.1"
                     /translation="MNGATITPGMIVSPALNGTLNNVYGTNTTTGGTSSGGGFSNSAN
                     SGSSSASFGGSSGGGLGGGLGSGLGGGLGGGLGGGLGGGLGGGLGGGLGGGTGGGLGG
                     SGTGTGPGLGLGGGTGGGLGGSSTGVGSGLGGGNSLGGQGNAPLNGQGNGFNGLGNGL
                     GNGLNGQGQGQGQGNGNPGGGQPQPPAGDGAMRMDPAEGVAEGGTAIEDIAKSGAPAE
                     DNAVADESRPGFADQIAAASQDRAADQSRLAEALVALGRMLAA"
     gene            973..>1527
                     /locus_tag="VLL76_08065"
     CDS             973..>1527
                     /locus_tag="VLL76_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013713874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSV29499.1"
                     /translation="MLISNDKGSVIGQTPRQGFKAWLLASAAALMLTGCAVTPEPFTM
                     DEHKARAEQDVAALKKDQEAIKAPLSLYDAMARAVKYNLDHRLKVMEEAFNERQLTTA
                     NLSMLPALTAKAGYEGRNNQSGSSSRSLLTGAQSLETSSSLDRDRFVYDYGLSWNVLD
                     FGVSYIRAKQQADRLLIVQERKRKV"
BASE COUNT          236 a          515 c          564 g          212 t
ORIGIN      
        1 gcctccgcct ccgccgcctc cgctgccgcc ggctccgccc gtggtggcgc cgccgccgcc
       61 ggtggctccg ccggtggccc cgccggcccc gccggtggcc ccgccgccgc cgccggccac
      121 cggtctggtc aacggcatca tgaacggcgc caccatcacg cccggcatga tcgtcagtcc
      181 ggcactgaac gggacgctca acaacgtcta tggcaccaac acgaccacgg gcggcacaag
      241 tagcggcggt ggcttcagca acagcgccaa cagcggcagc agcagcgcca gcttcggcgg
      301 ctcgtccggc ggcggccttg gcggtggctt gggcagtggc cttggcggtg gtttgggcgg
      361 cggcctcggc ggtggtttgg gcggcggcct tggcggaggt ttgggcggcg gcctcggcgg
      421 tggcacgggc ggaggcctgg gcggcagtgg caccgggacc ggtcccggcc tcggcctcgg
      481 cggcggcacg ggcggtggcc tgggcggcag cagcaccggt gtcggttccg gccttggcgg
      541 cgggaacagc ctcggcggcc agggcaatgc tccgctcaac ggccagggca acggcttcaa
      601 cgggcttggc aacggcctcg gcaacggcct caacggccaa ggccagggcc aaggtcaggg
      661 caacggcaac ccgggtggcg gccagccgca gccgcccgcg ggcgacggag ccatgcgcat
      721 ggatccggcc gagggcgtgg ccgaaggcgg cactgcgatc gaggacatcg cgaagtccgg
      781 ggctccggcc gaggacaacg ccgtggccga cgagtcgcgg cccggcttcg ccgaccagat
      841 cgcggcggcg tcgcaggacc gtgccgccga tcaatctcgc ctcgccgagg cgttggttgc
      901 acttggacgg atgttggcgg cgtgataaac aacgacaggt ttcgtgcggg acgtcgagca
      961 gaagggggat tcgtgttgat ttccaacgac aaggggtctg tgatcgggca gaccccgcga
     1021 cagggattca aggcttggct gctggcttcg gcggcggcgc tgatgctgac cggctgcgcc
     1081 gtgacgcccg agccgttcac catggacgag cataaggccc gtgccgagca ggacgtggcc
     1141 gcgctgaaga aggaccagga ggccatcaag gcgccgctgt ccctctatga cgccatggcg
     1201 cgcgcggtga agtacaacct ggaccatcgg ctgaaggtga tggaggaggc gttcaacgaa
     1261 cgccagttga ccaccgccaa cctgtcgatg ctgccggctc tgaccgccaa ggcgggctac
     1321 gagggccgca acaaccagag cggttcgtcc agccgctcgc tgctgaccgg ggcgcagtcg
     1381 ctggaaacct cgagctcgct cgaccgcgac cgcttcgtct acgattatgg cctcagctgg
     1441 aacgtgctgg atttcggcgt gtcctacatt cgcgccaagc agcaggccga ccgcctcctg
     1501 atcgttcagg agcgcaagcg caaggtc
//
LOCUS       DATIKR010000519         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_237392, whole genome shotgun sequence.
ACCESSION   DATIKR010000519 DATIKR010000000
VERSION     DATIKR010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237392"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VLL76_08070"
     CDS             complement(<1..214)
                     /locus_tag="VLL76_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29500.1"
                     /translation="MRLPVAALLALFAFPAAAEDLPQFPKAGPPQPLPEASCDTALPN
                     NGEWLVGRWVSPQTRWSFARQGQAIAW"
     gene            complement(223..492)
                     /locus_tag="VLL76_08075"
     CDS             complement(223..492)
                     /locus_tag="VLL76_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29501.1"
                     /translation="MTRFAILLPVLALSACAASSVPWSNPDLPKDQWSRDWASCKRWA
                     EERVGYQEGESSQFRDYDRAQAKKRIDGIAGACMRERGYFPVKNK"
     gene            637..1068
                     /locus_tag="VLL76_08080"
     CDS             637..1068
                     /locus_tag="VLL76_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV29502.1"
                     /translation="MSGELNGYYFEDLSVGMSASFAKTVTEADIAAFAGVSGDFNPVH
                     INEEFAKDTMFKGRIAHGMLSAAFISTVFGMKMPGPGCIYVSQQLKFKAPVRIGDTVT
                     AKVEVTATTPEKKFVTFKTTCSVAGKVVVDGEATLMVPSKG"
     gene            complement(1065..>1660)
                     /locus_tag="VLL76_08085"
     CDS             complement(1065..>1660)
                     /locus_tag="VLL76_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV29503.1"
                     /translation="QLFDDYADKFDAALVEKLDYRAPALLADALRRTLGEVSGLQVMD
                     AGCGTGLAAPVLRPLAAWLEGVDLSPAMVAKARQRGLYDELREGELVQALSDSATHFD
                     LVVAADVLVYLGDLEPVMRAARKALAPGGAFAFTVERCDDVETYVLGAKSRYAHAEGY
                     VRKVAEQAGFTVALLEQAVTRRDAGADVPGLVAVVRL"
BASE COUNT          280 a          557 c          576 g          247 t
ORIGIN      
        1 tccaggcgat ggcttggccc tgccgggcga agctccagcg ggtctggggc gacacccagc
       61 ggccgaccag ccattcgccg ttgttgggca aagcggtgtc gcacgacgcc tcgggcagcg
      121 gctgcggcgg gccggccttg gggaattgcg gcaggtcctc ggcggcggcg gggaaagcga
      181 acagcgccag cagggcggcg acgggaaggc gcatggtcgg gctcacttgt tcttgacggg
      241 gaaatagccg cgctcgcgca tgcaggcgcc ggcgatgccg tcgatccgct tcttggcctg
      301 ggcgcggtcg tagtcgcgga actggctgga ctcgccttcc tggtagccca cccgctcctc
      361 ggcccagcgc ttgcagctcg cccagtcgcg gctccactgg tccttgggca ggtcgggatt
      421 gctccacggc accgacgacg cggcgcaggc ggacagggca aggacgggca acaggatggc
      481 gaagcgggtc acggcaacct cattcggtgt ggcggcattc ggccacagga tcggcatttt
      541 gacaatggcg ggaaatcgcc cgagcgcgcg ttgccgggtc ggccgccggg gtctatactg
      601 caccgcacca taagccattc accaacggag acggccatga gcggcgagct gaacggttac
      661 tatttcgagg acctgagcgt gggcatgtcg gcctcgttcg ccaagaccgt gaccgaggcg
      721 gacattgccg ccttcgccgg tgtgtcgggc gacttcaacc cggtccacat caacgaggaa
      781 tttgccaagg acaccatgtt caagggccgc atcgcccacg gcatgctgtc ggccgccttc
      841 atctcgaccg tgttcggcat gaagatgccc ggcccgggct gcatctacgt gtcgcagcaa
      901 ctgaagttca aggcgccggt gcgcatcggc gacaccgtga ccgccaaggt cgaggtcacc
      961 gccaccaccc cggaaaagaa gttcgtgacc ttcaagacca cctgctcggt cgccggcaag
     1021 gtggtggtgg acggcgaagc caccctgatg gtgccgtcga agggctaaag ccggaccacg
     1081 gccaccagcc ccgggacgtc ggcgccggcg tcccggcggg tgaccgcctg ctccagcagg
     1141 gcgacggtga agccggcttg ttccgccacc ttgcggacat agccctcggc gtgggcatag
     1201 cggctcttgg cgcccagcac ataggtctcg acgtcgtcgc agcgttcgac cgtgaaggcg
     1261 aaggcgccgc cgggcgcgag cgccttgcgc gccgcccgca tcaccggttc gagatcgccg
     1321 agatagacca gcacgtcggc ggcgaccacc aggtcgaaat gggtggcgct gtcggacagg
     1381 gcctgcacca actcgccctc gcgcaattcg tcgtaaaggc cgcgttggcg cgccttggcg
     1441 accatggccg gcgacagatc gaccccttcc agccaggcag ccagcggacg cagcaccggc
     1501 gccgccagcc cggtgccaca gcccgcgtcc atcacctgca gacccgagac ctcgcccagg
     1561 gtgcggcgta gcgcgtcggc cagcagagcg ggggcgcggt agtcgagctt ttcgaccagg
     1621 gcggcatcga acttgtcggc atagtcgtcg aacaactggc
//
LOCUS       DATIKR010000520         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_7637, whole genome shotgun sequence.
ACCESSION   DATIKR010000520 DATIKR010000000
VERSION     DATIKR010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7637"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VLL76_08090"
     CDS             complement(<1..307)
                     /locus_tag="VLL76_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV29504.1"
                     /translation="MTPPAGGGDKGKLLPWAMWLLGALFYCYAFFQRVAPAVMVDAMM
                     AEFSVGAAIAGMLSGLYFYTYAGMQIPIGLLLDRFGPRVMLALFAALSCLGSALFAMS
                     "
     gene            complement(304..1047)
                     /locus_tag="VLL76_08095"
     CDS             complement(304..1047)
                     /locus_tag="VLL76_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HSV29505.1"
                     /translation="MTKTVPPSSAEPRAKPQGGKVSDRVADRILARIASGEWAPGQRL
                     PGERQLAEDMGVSRVSIRAALQQLKTQGFLDAVQGGGTRVISDVATIDPALAELVRVN
                     CENLHDLAEVRGILEVWAVRRAAHNARPENLIELAEIMAATEADISRGKHKTENDIRF
                     HLAVAKAAGSGIYLHVMGVFRGILQQMLDYHRYELFPTPEDDRTILAHHRAIFEGIKT
                     HNPDAAADAMETHLGWVLARYRERAREGG"
     gene            1139..1426
                     /locus_tag="VLL76_08100"
     CDS             1139..1426
                     /locus_tag="VLL76_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014190039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HSV29506.1"
                     /translation="MTVTAHVHLINSDELEALSMSARKFAKHIGVPPNAVTAILNCER
                     GVTAQMALRLGQAFGTGPGYWMRLQDIYEEKRAREELGGTLDGIELLQAVG"
     gene            complement(1436..>2071)
                     /locus_tag="VLL76_08105"
     CDS             complement(1436..>2071)
                     /locus_tag="VLL76_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014748475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV29507.1"
                     /translation="PVTRPAKIIGIGLNYRDHAAEAGMALPAEPVVFSKHLGALAGPD
                     DALTLPAGTAKLDYEVELAVVIGRPAWQVAEAEALSYVAGYITANDVSARDWQIERGG
                     QWVKGKSAPGFCPLGPWLVTADEIPDPQALKLWTEVNGHRRQNGTTADMVFGVAYLVS
                     YLSNFIALEPGDVILTGTPAGVGMGKGVFLAKGDRVEVSVEGLGKQATVVQ"
BASE COUNT          342 a          679 c          719 g          331 t
ORIGIN      
        1 cggacatggc gaacagggcg ctgcccaggc aggacaaggc ggcgaacagg gccagcatga
       61 cgcgcggccc gaagcggtcg agcagcagcc cgatggggat ctgcatcccg gcgtaggtat
      121 agaaatagag gcccgacagc atgccggcga tggcggcgcc gacgctgaac tcggccatca
      181 tggcatcgac catgacggcg ggtgccaccc gctggaagaa ggcgtagcag tagaacaagg
      241 cgccgagcag ccacatggcc cacggcagca atttcccctt gtcgcccccg ccggccggcg
      301 gcgtcacccg ccctcgcgag cccgctcgcg gtagcgggcg agcacccagc ccagatgcgt
      361 ctccatggcg tcggccgcgg cgtcggggtt gtgggttttg atgccctcga agatggcgcg
      421 atgatgggcc aggatggtgc ggtcgtcctc cggcgtcggg aacagctcgt agcggtgata
      481 atccagcatc tgctgcaaga tgccgcggaa cacccccatg acatgcagat agatgccgga
      541 accggccgcc ttggccaccg ccaggtggaa gcggatgtcg ttctcggtct tgtgcttgcc
      601 ccggctgatg tcggcctcgg tggcggccat gatctcggcc agttcgatca ggttctcggg
      661 ccgggcattg tgggcggcgc gtcggaccgc ccaaacctcc aatattcccc gcacctcggc
      721 cagatcgtgc aggttctcgc agttgacgcg caccagttcg gccagcgccg ggtcgatggt
      781 ggcgacgtcc gagatcaccc gggtgccgcc gccctggacg gcatcgagga agccctgggt
      841 cttgagctgc tgcagcgccg cacggatcga cacgcgcgac acccccatgt cctcggccaa
      901 ttggcgctcg cccggcagac gctggcccgg cgcccactcg cccgaggcga tgcgggccag
      961 gatacggtcg gcgacacgat cggaaacctt gccgccctgc ggcttggcgc ggggttcggc
     1021 ggatgacggg ggtacggtct tggtcatacc tttatggtgc ccgcccacac cgcgcgccgt
     1081 caagcggcgc cgttcgcctt gcgcgcgaga tatatgaacg catatgggcg gcgggctctt
     1141 gaccgttacg gcccacgtac atttaatcaa ttcggacgag ttggaggcgc tgtcgatgag
     1201 cgcccggaaa ttcgccaaac acatcggtgt gccccctaac gccgtgaccg ccattctgaa
     1261 ttgtgagcgc ggggtgacgg cgcagatggc attgcggctt gggcaggcat tcggcactgg
     1321 gccgggatat tggatgcgct tgcaggatat atacgaggag aagcgtgccc gagaggaatt
     1381 gggcggcacg ctggatggca tcgaactcct gcaggccgtt gggtaacttc ccaccctatt
     1441 gaacgaccgt cgcctgcttc cccaacccct cgaccgagac ctcgacacgg tcgcccttgg
     1501 cgaggaacac gcccttgccc atgccgacgc cggccggggt gccggtcagg atgacgtcgc
     1561 cgggttccag ggcgatgaag ttggacaggt acgacaccag ataggcgacg ccgaacacca
     1621 tgtcggcggt ggtgccgttc tggcggcggt ggccgttgac ctcggtccat agcttcaggg
     1681 cctgcgggtc gggaatttcg tcggcggtca ccagccacgg ccccagcggg cagaagccgg
     1741 gcgccgactt gcccttgacc cactggccgc cgcgctcgat ctgccagtcg cgggcggaga
     1801 cgtcgttggc ggtgatgtag ccggccacat aggacagcgc ctcggcctcg gccacctgcc
     1861 aggcgggccg cccgatcacc accgccagtt cgacctcgta atccagcttg gcggtgccgg
     1921 cgggcagcgt cagggcatcg tcggggccgg ccagggcgcc gagatgcttc gagaacacca
     1981 ccggctcggc cggcagggcc atgcccgcct cggcggcgtg gtcgcggtag ttcaagccga
     2041 tgccgatgat cttggcgggc cgggtcacgg g
//
LOCUS       DATIKR010000521         2103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_164817, whole genome shotgun sequence.
ACCESSION   DATIKR010000521 DATIKR010000000
VERSION     DATIKR010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164817"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2103
                     /locus_tag="VLL76_08110"
     CDS             <1..>2103
                     /locus_tag="VLL76_08110"
                     /inference="COORDINATES: protein motif:HMM:NF019974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29508.1"
                     /translation="LGLGELDAARAQVDGDADLRSVLESYSRIVGSLIAASARLSFDD
                     LSNLIAAYMDMGHIKDRIARERSVGASWLLQDSPDTDLLVLFAQAHAEKTAFIESFRG
                     HASKSQQRIFDEIVHGPILDEIERQHRRMLEGKLTQADADVWHRTHLALGDLVSRAEE
                     RMALDMEREIQANLAAAKTTFYGVVIVVVGLVVFSLETLRRSERRATLAQEEARKLSR
                     AVEQSPVSVMITDTTGIVEYVNPAFTRMTGFSRDEMLGRNPRVLKSDQVAKTTYAELW
                     HTIRAGLEWRGEIVNRRKDGTAYWEQMTIAPVKRDGKVINYIALKEDVTEVRTLRQSL
                     EREHANIRRILEATHDGIALLSGNGDFEYANPALVAEFGPIDGRNCRDYFNDPDAPCP
                     TCDLNPLGIVRREWRSRVTGKVYELTGSPVQNLDGSHSLLQVFHDITVRKQAEEALNG
                     ARVAAELANRAKSEFLATMSHELRTPLNAIIGFSEIIEGELLGPVGQPQYSEYARDIN
                     DSGRHLLQLINDILDVARLEVGRVTLREDMVDAGSLVRAGLNMVRERAEAADLALTAT
                     VAPGLPMLWADERRLKQVLVNLLGNAVKFTQPGGSIEASVRLAPDGGMEIAVSDTGIG
                     IAPEDIPKIMAPFGQADSGMARRYEGSGLGLPLSRQLMELHGGTLTIDSQVGHGTTVS
                     LHFPAERLRAATGERIADT"
BASE COUNT          370 a          756 c          675 g          302 t
ORIGIN      
        1 cctcggcctc ggcgagttgg acgccgcccg cgcccaggtg gacggcgatg ccgacctgcg
       61 gtcggtgctg gaaagctaca gccgcatcgt cggcagcctg atcgccgcgt cggcccggct
      121 gtcgttcgac gacctgtcga acctgatcgc ggcctacatg gacatggggc acatcaagga
      181 ccgcatcgcc cgcgagcggt cggtcggcgc gtcatggctg ctgcaggact cgcccgatac
      241 cgacttactg gtgctgttcg cccaagccca cgccgagaag acggcgttca tcgaatcctt
      301 ccgcggccat gcctcgaagt cgcagcagcg catcttcgac gagatcgtcc acggcccgat
      361 cctcgacgag atcgagcgcc agcatcgccg catgctggag ggcaagctga cccaggcgga
      421 cgccgacgtg tggcaccgca cccatctggc gctgggcgat ctggtcagcc gcgccgagga
      481 gcgcatggcg ctcgacatgg aacgcgagat ccaggccaat ctggcggccg ccaagaccac
      541 cttttatggc gtcgtcatcg tggtggtggg gttggtggtg ttctcgctgg agaccctgcg
      601 ccgcagcgaa cgccgcgcca ccctggccca ggaagaggcc cgtaagctgt cgcgcgcggt
      661 cgagcagagc cccgtctcgg tgatgatcac cgacaccacc ggcatcgtcg aatacgtcaa
      721 cccggcgttc acccgcatga ccggcttcag ccgcgacgag atgctgggcc gcaacccgcg
      781 cgtcctgaag tccgaccagg tcgccaagac cacctatgcc gagctgtggc acaccatccg
      841 cgccggcctg gaatggcgcg gcgagatcgt caaccggcgc aaggacggca ccgcctattg
      901 ggagcagatg accatcgcgc cggtgaagcg cgacggcaag gtcatcaact acatcgccct
      961 gaaggaggac gtcaccgagg tccgcaccct gcgccagtcg ctggagcgcg agcacgccaa
     1021 catccgccgc atcctggaag ccacccatga cggcatcgcg ctgttgagcg gcaacggcga
     1081 tttcgaatac gccaacccgg cgctggtcgc cgaattcggc cccatcgacg gccgcaactg
     1141 ccgcgactat ttcaacgacc ccgacgcccc ctgcccgacc tgcgacctca acccgctggg
     1201 catcgtccgc cgcgaatggc gctcgcgcgt caccggcaag gtctatgaac tgaccggctc
     1261 gcccgtgcag aacctggacg gctcgcattc gctgttgcag gtgttccacg acatcaccgt
     1321 gcgcaagcag gcggaagagg cgctgaacgg agcccgcgtc gccgccgaat tggccaaccg
     1381 ggcgaaaagc gagttcctgg ccaccatgag ccacgagctg cgcaccccgc tgaacgccat
     1441 catcggcttt tccgaaatca tcgagggtga attgctgggg ccggtcggtc agccgcaata
     1501 ctcggaatac gcccgcgaca tcaacgattc cggccgccac ctgctgcagt tgatcaacga
     1561 catcctggac gtggcccggc tcgaggtcgg ccgcgtcacc ctgcgcgagg acatggtgga
     1621 tgccggcagc ctggtgcggg ccggcctcaa catggtgcgc gagcgcgccg aggccgccga
     1681 cctcgccctg accgccacgg tggcgcccgg cctgcccatg ctgtgggccg acgaacgccg
     1741 cctcaagcag gtgctggtca acctgctggg caacgccgtc aagttcaccc agcccggcgg
     1801 cagcatcgag gcgtcggtgc gcctggcgcc cgacggcggc atggagatcg cggtgtccga
     1861 caccggcatc ggcatcgccc ccgaagacat ccccaagatc atggcgccgt tcggccaggc
     1921 ggattccggc atggcgcgcc gctacgaggg ctcgggcctg ggcctgccgc tgtcccgcca
     1981 gttgatggaa ctgcacggcg gcaccctcac catcgacagc caggtgggcc acggcaccac
     2041 cgtatcgctg cacttccccg ccgagcggct gcgcgccgcg acgggcgaac gaatagccga
     2101 cac
//
LOCUS       DATIKR010000522         2979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_177502, whole genome shotgun sequence.
ACCESSION   DATIKR010000522 DATIKR010000000
VERSION     DATIKR010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177502"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1134
                     /locus_tag="VLL76_08115"
     CDS             <1..1134
                     /locus_tag="VLL76_08115"
                     /inference="COORDINATES: protein motif:HMM:NF017850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HSV29509.1"
                     /translation="FFVPAEVAPKDQRRFVFDDDARLRLLTWESPLFGEELPERKFLV
                     HRFGDKTGDPYGRGLGHQLFWWVYFKRMVMQFWLVFAEKFGSPTVAGEYPNTMLPADQ
                     DKLLATLSNLAQQGALIMPEGTKAYLLEALRSGTVTYPELVEYCDRMITLAVLGNTLT
                     TSEGNAGSRALGQVHAGVEETIVDADADMLSGTLNAQLMAWITWLNYPGAKPPRVWRP
                     RPTEETAEEKLLQERIKTLDMAVRHVDSRRRSGWEPTDPTLPLIDQVTGDWIYTGKAT
                     SVLADGRETMPKDPPAELAAPDRRRDGVDDLVDQVHEAAAPAMDLLVDQVRTIIAEAD
                     SLDQVADLLLARYAEIDDTALADVMRQALELGALTGAADAGNP"
     gene            1118..2380
                     /locus_tag="VLL76_08120"
     CDS             1118..2380
                     /locus_tag="VLL76_08120"
                     /inference="COORDINATES: protein motif:HMM:NF037113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBECR2 nuclease fold domain-containing protein"
                     /protein_id="HSV29510.1"
                     /translation="MPAIPERLQFDEAIDFIGGKARLPSVGWTDLKESAHARAFVVAG
                     ATKDALVADFHQAVTRAVAEGRTKADFLRDFDAIVARNGWSYKGGRGWRSGVIYTTNM
                     RMSYQAGKWAKVRALAEQLAKQGRVVYLRYSAILDGGTRPLHREWGTAGGRGIILPWD
                     HPWWDKHYPPNDWGCRCTVEILTDDDLADMGLDPTPEGELPSRMEDREVETRFGAEIW
                     PTPEGVGTGFGYNVGKAWLQGAVPPQLHQPMPAPGGDRQGHGLPPLSPHRFDASRLLP
                     KGLSDGDYVSRFLAEFGAAPGRPAAFRDVSGTLLAVGQELFIDRRTGGWKVQKNDREV
                     YLLALADALKEPDEIWADWFPAGNGAFVVRRRYLRTIDLPDGAGALASFQWPPLGWEG
                     RTIFQPDADGYLEGQRRGVLLWKRPAGA"
     gene            2763..>2979
                     /locus_tag="VLL76_08125"
     CDS             2763..>2979
                     /locus_tag="VLL76_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29511.1"
                     /translation="MWGDTVPEGVSIKAVEILKPGTYWDANGNEVPVTLADLRELAAE
                     YDPALLASPVVVGHPKMDDPAYGWMDRL"
BASE COUNT          488 a         1005 c         1020 g          466 t
ORIGIN      
        1 ttcttcgtgc cggccgaggt cgcgcccaag gaccagcgcc gtttcgtgtt cgacgacgat
       61 gcccgcctgc ggctgctgac ctgggaaagc ccgctgttcg gcgaggagct gcccgagcgc
      121 aagttcctgg tccaccgctt cggcgacaag actggcgacc cctatggacg tggactgggg
      181 caccagctgt tctggtgggt ctatttcaag cgcatggtca tgcagttctg gctggtgttc
      241 gccgagaagt tcggcagccc caccgtcgcc ggagaatacc ccaacaccat gctgccggcc
      301 gaccaggaca agctgctggc cacgctgtcc aacctggcgc aacaaggcgc cttgattatg
      361 cccgagggca caaaggccta tttgctggag gccctgcgct cgggcaccgt cacctatccc
      421 gagctggtcg agtattgcga tcgcatgatc acgctggcgg tcctgggcaa caccttgacc
      481 accagcgaag gcaatgccgg cagtcgggcg ctgggccagg tgcatgccgg ggttgaggaa
      541 accatcgtcg acgccgacgc cgacatgctg tcgggcacgc tcaatgccca gctgatggcc
      601 tggatcacct ggctcaacta tcccggcgcc aagccgcccc gggtctggcg gccgcgcccg
      661 accgaggaga cggccgagga gaagctgctg caggagcgga tcaagacgct ggacatggcg
      721 gttcggcacg tcgacagccg gcgccgatcg ggctgggagc cgaccgaccc cacgctgccg
      781 ctgatcgacc aggtcaccgg cgactggatc tacaccggca aggcgacatc tgtgctggcc
      841 gacggccgcg agacgatgcc caaggatccg ccggccgagc tggctgcgcc ggatcgccgc
      901 cgcgacggtg tcgacgacct ggtcgaccag gtgcacgagg cggcggcgcc ggcgatggat
      961 ctgctggtcg accaggtgcg caccatcatc gccgaggccg acagcctcga ccaggtcgcc
     1021 gatctgctgc tcgcccgtta cgccgagatc gatgacaccg ccctggccga cgtcatgcgc
     1081 caggcgctgg aattgggcgc cctgaccgga gccgccgatg ccggcaatcc ctgagcggct
     1141 gcaattcgac gaggcgatcg acttcatcgg cggcaaggcg cggctgccgt ccgtcggctg
     1201 gaccgacctc aaggaatcgg cgcatgcgcg ggcgttcgtc gtcgccggcg ccaccaagga
     1261 tgccctggtc gccgatttcc accaggccgt gaccagggcg gtggcggaag gccggaccaa
     1321 ggccgacttc ctgcgcgact tcgacgcgat cgtcgccagg aacggctggt cgtacaaggg
     1381 tggtcgcggc tggcggtccg gcgtcatcta caccaccaac atgcgcatgt cgtaccaggc
     1441 cggcaaatgg gccaaggtgc gggcattggc cgagcaactg gccaagcagg ggcgcgtcgt
     1501 ctacctgcgc tattccgcca tccttgacgg cggcacccgg ccgctgcacc gcgaatgggg
     1561 gacggccggc ggcagaggca tcatcctgcc ctgggatcat ccctggtggg ataagcatta
     1621 tccgcccaac gactggggct gccgctgcac cgtcgagatc ctgaccgacg acgacctcgc
     1681 cgatatgggt ttggacccga cccccgaagg cgagctgccc agccggatgg aggaccgcga
     1741 ggtcgaaacc cgcttcggcg ccgaaatctg gccgacccca gagggcgtcg gcaccggctt
     1801 cggctacaac gtgggcaagg cgtggctcca gggcgcggtg ccgccgcaac tgcaccagcc
     1861 catgccggcg ccgggtggcg atcgccaggg acatgggttg ccgccactgt caccgcatcg
     1921 cttcgacgct tccaggctgc tgcccaaggg cctgtccgac ggtgactatg tgtccaggtt
     1981 cctcgccgaa ttcggcgcgg cgcccggccg accggcggcc tttcgcgacg tgtccgggac
     2041 gctgctcgca gtggggcaag agttgttcat cgaccgccgc accggcggct ggaaggtcca
     2101 gaagaacgat cgcgaagtct atctgctggc gctggccgac gcgctgaagg agccggacga
     2161 gatctgggcc gactggttcc cggccgggaa cggtgcgttc gtggtgcggc gccgctacct
     2221 gcgcaccatc gatctgcccg acggcgccgg agcgctggcg tcattccaat ggcctccgtt
     2281 gggttgggaa gggcggacca tcttccagcc ggatgccgat ggctacctgg aaggtcagcg
     2341 gcgcggggtg ctgctgtgga aacgccctgc gggcgcatga tagaggccgg gatgcccacc
     2401 accccagcct tgcggcaaag ccgaacgatc gcggtgggcg cgccgcattg ccacaccgtc
     2461 attgtacgcc ctcggcgccg gcatctcaag cgcgagcggt tttgggcgct cctggacatc
     2521 cgggagggtt ccgacggggg cacggccgtc cccaacccgc ttccccccgt tagaccaccg
     2581 ttagaccccc ggcaaacggc atcccgaccg atagggatgg gcgtgcatgc gcaaaggcgg
     2641 ttgccgccgc cgatcggaca gggcaaggtg ggggccttcc ccctccgatc ggtttgtccc
     2701 tgaaatcctt cagggttatg cggtcaccgc cgcccgcata gggtcgcccc atggcttgaa
     2761 ccatgtgggg tgacaccgtg cccgagggcg tttccatcaa ggccgtcgag atcctgaagc
     2821 ccggcaccta ttgggatgcc aacggcaacg aggtgccggt gacgctggcc gacctgcgcg
     2881 agctggcggc cgagtacgac ccggcgctgc tggcttcgcc ggtggtggtc ggccatccca
     2941 agatggacga tccggcctat ggctggatgg atcgcctgt
//
LOCUS       DATIKR010000523         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_68634, whole genome shotgun sequence.
ACCESSION   DATIKR010000523 DATIKR010000000
VERSION     DATIKR010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68634"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1258)
                     /gene="trpB"
                     /locus_tag="VLL76_08130"
     CDS             complement(38..1258)
                     /gene="trpB"
                     /locus_tag="VLL76_08130"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HSV29512.1"
                     /translation="MQSLNTYRAGPDERGHFGIFGGRYVAETLMPLILEVEKAYAAAK
                     ADPAFAAEFRDLLKNYVGRPNPLYFARRLTETWGGARIYLKREDLNHTGAHKINNCIG
                     QILLARRMGKQRIIAETGAGQHGVATATVCALFGMQCVIYMGATDIERQAPNVYRMKL
                     LGAEVRPVTSGAATLKDAMNDALRDWVTNVDTTYYLIGTVAGPHPYPAMVRDFQSVIG
                     EEVRAQIMEHEGRLPDSLVACIGGGSNAMGLFHPFLDDKDVRIIGVEAAGYGLDKLHA
                     ASLTGGRPGVLHGNRTYLLQDKDGQIEEAHSISAGLDYPGIGPEHAWLHDIGRVEYVS
                     VTDDEALTAFQQVTRLEGIIPALESSHAFAHAAKIAGTLPKDHLMVVNLSGRGDKDVN
                     TVARALGDTQLGGL"
     gene            1409..1786
                     /locus_tag="VLL76_08135"
     CDS             1409..1786
                     /locus_tag="VLL76_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HSV29513.1"
                     /translation="MINFRAFAMAAFAVAVATPAFAKEEPVSFAEDVQPVLQMRCVMC
                     HQPGQEGYEKSGFDLTSYEGLMKGTKHGPMIVPGDPYTSNLVVLVEGRADKSLQMPHG
                     KKKLNSCDRELLRKWIKQGAKNN"
BASE COUNT          314 a          586 c          682 g          335 t
ORIGIN      
        1 gcggccagct tcatgaagcg acgggccaga cggctcatca caggcctccc aactgggtgt
       61 cgccaagcgc gcgggcgacg gtgttgacgt ccttgtcgcc gcggcccgac aggttgacca
      121 ccatcaggtg atccttgggc agcgtgccgg cgatcttggc ggcgtgggcg aaggcgtggc
      181 tggattccag ggccgggatg atgccctcca ggcgggtcac ctgctggaac gcggtcaggg
      241 cctcgtcatc ggtcaccgac acgtattcga cgcggccgat gtcgtgcagc caggcatgct
      301 cggggccgat gccgggataa tcgaggccgg ccgagatgga atgcgcttcc tcgatctggc
      361 cgtccttgtc ctgcagcaga taggtgcggt tgccgtgcag cacgccgggg cggccgccgg
      421 tcagcgacgc cgcgtgcagc ttgtcgaggc cgtagccggc cgcctcgacg ccgatgatgc
      481 ggacgtcctt gtcgtcgagg aagggatgga acaggcccat ggcgttggaa ccgccgccga
      541 tgcaggcgac cagcgaatcg ggcaggcggc cctcgtgttc catgatctgg gcgcggactt
      601 cctcgccgat caccgactgg aagtcgcgca ccatggccgg gtagggatgc gggccggcga
      661 ccgtgccgat caggtaatag gtggtgtcga cgttggtcac ccagtcgcgc agggcgtcgt
      721 tcatggcgtc cttcagggtg gccgcgccgc tggtgacggg ccggacctcg gcgcccaaga
      781 gcttcatgcg atagacgttg ggggcctgac gctcgatgtc ggtggcgccc atgtagatca
      841 cgcattgcat gccgaacagc gcgcacacgg tggcggtggc gacgccgtgc tggccggcgc
      901 cggtctcggc gatgatgcgc tgcttgccca tgcggcgggc caacaggatc tggccgatgc
      961 agttgttgat cttgtgcgcg ccggtgtggt tgaggtcctc gcgcttcaga tagatccggg
     1021 cgccgcccca ggtctcggtc aggcggcggg cgaaatacag cgggttggga cggcccacgt
     1081 aattcttcag caggtcgcgg aactctgcgg cgaaggccgg gtcggccttg gcggcggcat
     1141 aggccttctc gacctcgagg atcagcggca tcagggtctc ggccacatag cggccgccga
     1201 agatgccgaa atgcccgcgc tcgtcgggac ctgcgcggta ggtgttcaag ctctgcatgt
     1261 tccgtccctg gactggaggg ccgctaataa agcatgaagc gccgggagag gggaggggtt
     1321 tcgtgccgtt gccccgcgac ggcgggcgcg aaaaggtgta tgctgcaagc catatgggtt
     1381 tgtgtcttga gacaggggag gattgaccat gattaatttc cgcgccttcg cgatggccgc
     1441 tttcgccgtc gccgtcgcga cgcccgcctt cgccaaggaa gagccggtca gctttgccga
     1501 ggacgtccag ccggtcctgc agatgcgctg cgtcatgtgc caccagccgg gccaggaagg
     1561 ctatgaaaag agcggcttcg acctgacctc gtacgagggc ctgatgaagg gcaccaagca
     1621 cggcccgatg atcgtccccg gcgaccccta caccagcaac ctggtggtgc tggtcgaagg
     1681 ccgcgccgac aagtcgctgc agatgccgca cggcaagaag aagctgaact cgtgcgaccg
     1741 cgaactgctg cgcaagtgga tcaagcaggg cgccaagaac aactgatcgc cgaagcggcg
     1801 atgcgctttc atagggcggc cccggcgggg gccgcccttt tttatggttc atcgccgaat
     1861 tccggggaag gtgtctgtct cttccgtcat gcccgtgctt gacacgggca tccacgc
//
LOCUS       DATIKR010000524         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_188893, whole genome shotgun sequence.
ACCESSION   DATIKR010000524 DATIKR010000000
VERSION     DATIKR010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188893"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VLL76_08140"
     CDS             complement(<1..754)
                     /locus_tag="VLL76_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HSV29514.1"
                     /translation="MEQIKGIRAQVARFMVVYLWLHVPLAAIAGAMVSGEWVMTTIGA
                     LVLAGATTLTWRMAAEGEATLYTVGVALMGMVALLVFAFEGHPWQIDMHMYFFAALAM
                     LTAFCDWRTLVVAAGAVAVHHLVLNFAYPAAVFPGGGSFLRVVLHAVIVVAQTAVLGW
                     VAWRLIQAFTAAEKAAAESSAAHEAAAAAAASRDRMTQEAAAGHKAEMNDLAGSLQGE
                     VGRVVEAMSQAATGARAAAEKLDGMVEDVSGKA"
     gene            complement(766..1065)
                     /locus_tag="VLL76_08145"
     CDS             complement(766..1065)
                     /locus_tag="VLL76_08145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29515.1"
                     /translation="MNKAFYPALGLLAFSIAWTGGLTAMPRDGKPVAAIYPPDFSGDS
                     AFRHVIAAGAEAILGIGGSNTVVLARSESPAFIDNLYASGALVVLRVPERGECLQ"
     gene            complement(1163..1444)
                     /locus_tag="VLL76_08150"
     CDS             complement(1163..1444)
                     /locus_tag="VLL76_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29516.1"
                     /translation="MSLAALLSSLYAVCGVAACLFYVPQLRRLARDAEARRAMSLVTW
                     GGWLAVGVVSLLYAAIVVGETEMIVVAGLNWLCQAAVFGLALAQRLSDR"
BASE COUNT          329 a          604 c          553 g          239 t
ORIGIN      
        1 tggccttgcc cgacacgtct tcgaccatgc cgtccagctt ttcggcggcg gcgcgggcgc
       61 cggtggcggc ctgcgacatc gcttcgacga cgcggccgac ctcgccctgc aggctgccgg
      121 ccagatcgtt catctcggcc ttgtggccgg cggcggcctc ttgcgtcatg cggtcgcgcg
      181 aagcggcggc ggcggcggcg gcctcatggg cggcggagga ttcggcggcc gccttctcgg
      241 cggcggtgaa ggcctggatc aggcgccagg cgacccagcc cagcacggcg gtctgcgcca
      301 ccacgatcac cgcatgcagc accacccgca ggaacgagcc gccgccgggg aacaccgccg
      361 ccggataggc gaagttcagc accaggtgat ggaccgccac cgcgccggcg gcgaccacca
      421 gggtgcgcca gtcgcagaac gcggtcagca tcgccaaggc ggcgaagaaa tacatgtgca
      481 tgtcgatctg ccagggatgg ccttcgaagg cgaacaccag cagcgcgacc atgcccatca
      541 gggcgacgcc cacggtgtac agggtcgcct cgccctcggc ggccatgcgc catgtcaggg
      601 tggtggcacc ggccagcacc agcgcgccga tggtggtcat cacccattca cccgacacca
      661 tggcgccggc aatggcggcc agcggcacat gcagccagag gtaaaccacc atgaagcgcg
      721 ccacctgcgc gcgaatgcct ttgatctgtt ccatggccta tccccttatt gcaggcattc
      781 accgcgttcc ggcacccgca ggaccaccag cgcgccggaa gcgtaaagat tgtcgatgaa
      841 ggcggggctt tccgagcggg ccaggacgac ggtgttcgag ccgccaatgc cgaggattgc
      901 ctcggctccg gccgcgatga catggcggaa agccgaatcg ccagagaaat ccgggggata
      961 gatggcggca accggcttgc cgtcgcgcgg catcgccgtc agcccgcccg tccaggcaat
     1021 gctgaaagcc agcaaaccca atgctggata aaaggccttg ttcatccgcc gcgatcccct
     1081 ttgccatcag gatagcgaaa gaggcgtccg cgtcctaacg ggcgcacgga caataacata
     1141 tcactttcgt ataaaattgc atctatctgt cggacaggcg ctgggccagg gccaggccga
     1201 acaccgccgc ctggcacagc cagttgagcc cggccacgac gatcatctcg gtctcgccta
     1261 ccacgatggc ggcatagagc aggctgacca cccccaccgc cagccagccg ccccaggtca
     1321 ccagcgacat ggcccggcgc gcctcggcat cgcgcgccag ccggcgcaat tgcggcacat
     1381 agaacaggca ggcggcgacg ccgcacacgg cgtagaggct ggacagcagg gcggcgagcg
     1441 acatggcgcg gcatcctgcc cgcctaggcc tttcggaaga atgaacgccc catggaggga
     1501 ggcgcgcgcg aaggagtctg cctcgttcgg gatatgcttg gatccgtggc ggaaaggcat
     1561 accttctcgg gagtaccgcc gccgacatgg tgccgacgac ggaaggtgta aggaccctcc
     1621 ccatgctgca gatgctccgt accgccgccg agaccaccat ccgcaccgtc gccgccatca
     1681 ccaaggcccc gcgcaccagc ccctacatca attacatgct gtaca
//
LOCUS       DATIKR010000525         3878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_177555, whole genome shotgun sequence.
ACCESSION   DATIKR010000525 DATIKR010000000
VERSION     DATIKR010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177555"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..168)
                     /gene="tatA"
                     /locus_tag="VLL76_08155"
     CDS             complement(<1..168)
                     /gene="tatA"
                     /locus_tag="VLL76_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018078716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HSV29517.1"
                     /translation="MGSFSIWHWLIVLVVVLLIFGTKKLRNIGSDLGGAVKGFKEGMK
                     EDAPKIAEKAEE"
     gene            complement(262..1329)
                     /locus_tag="VLL76_08160"
     CDS             complement(262..1329)
                     /locus_tag="VLL76_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007670023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29518.1"
                     /translation="MKDVTEGATCPAGLMLDKVSHSYGGKPVVREVTLAVTPGELVCL
                     LGPSGCGKTTTLRIAAGLEQPQRGRVTLNCQLVSGDGIHLPPEQRHVGFLFQDYALFP
                     HLNVVANVAFGLDHLGKAERAARVAEMLAQVGMAAYADAWPHQLSGGQQQRVALARAL
                     APKPRLMLLDEPFSGLDKRLRDQVRDETLHVLKSSGVSTLMVTHDPEEAMFMADRIAI
                     MRDGRVVQMGRPDELYCAPADAFVASFFGEVNVLAARVRGGEVPTPFGPRPAPGLADG
                     QAVEVVIRPEALSLAPADNGIAEVIAARMLGRTSLVHLRAQGLHLHARIPGRFLPAEG
                     ARMSVSLDTTQAFVFPVANAN"
     gene            complement(1326..2999)
                     /locus_tag="VLL76_08165"
     CDS             complement(1326..2999)
                     /locus_tag="VLL76_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSV29519.1"
                     /translation="MADLDIAETLLKPPRSPSLQWLASGRAGWSVATLLVALLVGAPV
                     AVVAAHLLAPAGEVWGHLAATVLPAYVANSLWLMLGVGTGVVVGGIGTAWLVTMCRFP
                     GARLLEWALLLPMAMPAYVVAYTYTGLLDYSGPVQSGLRALFGWPSARDYWFPEIRSL
                     GGAVAVMTVVLYPYVYMLARAAFLEQSVCVLEASRTLGRGPWRGFAQVALPLARPAIA
                     AGTALALMETLNDFGTVHYFAVDTFTTGIYRTWLGLGQPAVAAQLGALLMVFVLVLVV
                     VERASRGAKRYHHTTSRYRQLPRYRLRGFGRAAAMAFCFLPVLLGFLAPAAVLAGWAA
                     ESGAAVLSDPDFLHIVGNSFALAVTASGLAVTVALVMAYAQRLHPTRPTRAAVRFASL
                     GYAVPGSVIAVGTLVPLGAIGNAVGIMLIGSVAALVYAYLVRFLAVSFNTVEASLAKV
                     TGSMEAASRTLGQGAWGTLRRVHVPIMRGSLLSAGLLVFVDVMKELPATLIMRPFNFD
                     TLAVRTFSLASDERLAAAAAPALAIVLVGLVPVILLSRAIARSRPGGEQ"
     gene            3155..>3878
                     /locus_tag="VLL76_08170"
     CDS             3155..>3878
                     /locus_tag="VLL76_08170"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV29520.1"
                     /translation="MIRAALATIFCIALNAAVATTSLAKELNVVFLNPGAAQDIGLWG
                     VAANFMRAAADDLDINLEILFADRDHYRMQDQANAVAARPVQPDYVIMVNERQRGPAM
                     LRAFQDSSAKIVFLHNGLTGEQRAELGNEREAIPNWIATIVQNERRAGYLLMQELASL
                     HKGPAKVLAISGEQATPVSTIREQGLRDYIARSGKGRIQVLQSVNGNWGRPDGREKTR
                     GLLTRYDDVDIIWAANDSMALGA"
BASE COUNT          711 a         1363 c         1284 g          520 t
ORIGIN      
        1 ctcttcagcc ttttcggcga ttttcggcgc gtcttccttc atgccttcct tgaagccctt
       61 gaccgcgccg ccgaggtcgc tgccgatgtt acgcagtttc ttggtgccga aaatcagcag
      121 caccacgacc agaacgatca gccagtgcca gatgctgaag ctacccatga agctctctcc
      181 ctgccttgga tttggatgga gggttgggcg cggatcatcg cagaagactt aggccgccgc
      241 aaccgccccg gcacgaatgt tctaatttgc gttggccacc gggaacacga acgcctgggt
      301 ggtgtccagg ctcacgctca tgcgggcgcc ctcggccggc aggaagcggc cgggaatgcg
      361 ggcatgcagg tgcagtccct gggcgcgcag atggaccagg ctggtgcgcc ccagcatgcg
      421 cgccgcgatg acctcggcga tgccgttatc ggccggcgcc aggctcagcg cctcgggccg
      481 gatcaccacc tcgacggcct gcccgtcggc caggccgggt gcggggcgcg gaccgaacgg
      541 cgtcggcacc tcgccaccgc gcacgcgggc ggccaggacg ttgacctcgc cgaagaaaga
      601 ggcgacgaag gcgtcggcgg gggcgcaata aagctcgtcg ggacgcccca tctgcaccac
      661 ccgtccgtcc cgcatgatgg cgatgcggtc ggccatgaac atggcttcct cggggtcgtg
      721 ggtgaccatc agggtggaca cgcccgagga tttcagcacg tgcagggtct cgtcgcgcac
      781 ctgatcacgc agccgcttgt ccaggcccga gaacggctcg tccagcagca tcaggcgcgg
      841 cttcggcgcc agggcgcggg ccagggcgac gcgctgctgc tggccgcccg acaactggtg
      901 cggccaggcg tcggcatagg cggccatgcc gacctgggcc agcatctcgg cgacgcgggc
      961 ggcgcgctcg gccttgccca ggtggtcgag gccgaaggcg acgttggcga cgacattcaa
     1021 atggggaaac agggcatagt cctggaacag gaagccgacg tggcgctgtt ccggcggcag
     1081 atggatgccg tcgcccgaca ccaattggca gttcagcgtc acccgcccgc gctggggctg
     1141 ctccaggccg gcggcgatgc gcaaagtggt ggtcttgccg cagccggacg gccccagcag
     1201 gcagaccagc tcgcccggcg tcaccgccag cgtgacctcg cgcaccaccg gcttgccgcc
     1261 ataggaatgc gacactttgt ccagcatcag gcccgccgga caggtggcgc cctcggtgac
     1321 gtccttcatt gctctcctcc ggggcgcgag cgcgcgatgg cgcggctcag caggatgacg
     1381 ggcaccaggc ccaccagaac gatggcgagc gccggcgcgg cggcggcggc cagccgctcg
     1441 tccgacgcca acgagaacgt gcgcaccgcc agggtgtcga aattgaacgg ccgcatgatc
     1501 agggtggcgg gcagttcctt catcacgtcg acgaacacca gcaggccggc cgacagcagc
     1561 gagccccgca tgatcggaac atggacgcgg cgcagggtgc cccacgcccc ctgccccagt
     1621 gtgcgcgatg ccgcctccat ggagccggtg accttggcca ggctggcttc gacggtgttg
     1681 aacgacaccg ccaggaagcg caccagatag gcgtagacca gggcggcgac gctgccaatc
     1741 agcatgatcc ccacggcatt gccgatggcg cccagcggca ccagcgtgcc caccgcgatc
     1801 accgagccgg gcacggcgta gcccaggctg gcgaagcgca cggcggcgcg ggtcgggcgg
     1861 gtgggatgca ggcgctgggc ataggccatc accagcgcca ccgtaaccgc caggcccgac
     1921 gcagtcaccg ccagcgcgaa ggaattgccg acgatatgca ggaaatcggg gtcggacagc
     1981 accgccgccc cgctttccgc cgcccatccg gccagcaccg cggccggcgc caggaagccc
     2041 agcagcaccg gcaggaagca gaacgccatg gcggccgccc ggccgaaccc gcgcaggcgg
     2101 tagcgcggca attggcggta gcggctggtg gtgtggtgat agcgcttggc cccgcgcgag
     2161 gcacgctcga ccaccaccag caccagcacg aacaccatca gcaacgcccc caattgcgcc
     2221 gccaccgccg gctggcccag gcccagccag gtgcggtaga tgccggtggt gaaggtgtcg
     2281 acggcgaaat aatgcaccgt gccgaaatcg ttcagggtct ccatcagcgc cagcgcggtg
     2341 ccggcggcga tggccggccg cgccagcggc agcgccacct gggcgaaacc gcgccacggc
     2401 ccccgcccca gggtacggct ggcttccagc acgcacaccg actgttccag gaaggcggcg
     2461 cgggccagca tgtagacata ggggtacagc accaccgtca tcaccgcgac ggcgcccccc
     2521 agcgagcgga tctcggggaa ccagtaatcg cgcgccgacg gccagccgaa cagtgcgcgc
     2581 aggcccgatt gcaccgggcc ggaataatcc agcaggccgg tataggtgta ggcgaccaca
     2641 taggccggca tcgccatggg cagcagcagc gcccattcca atagccgcgc gcccgggaaa
     2701 cggcacatgg tgacaagcca ggcggtgccg atgccgccga cgacaacccc cgtcccgacg
     2761 cccagcatca gccacagcga attggcgaca taagctggca gcaccgtggc ggccagatgc
     2821 ccccacacct cgcccgccgg cgccagcaga tgcgccgcga ccaccgccac cggcgccccc
     2881 accagcagcg ccaccagcag agttgccaca ctccacccgg cccgcccgct ggcgagccac
     2941 tgaagtgatg gcgaacgcgg cggcttgagc aaggtttcgg cgatgtcgag atcggccatg
     3001 gacgcgggat gcctgacagg gtctgttcgc gcgacaggtt attgcaattt attcgcaaca
     3061 acaaccccgc ctccgcccgt cgggcatcgc gcatgacgaa aacagccgtg tgcgctatga
     3121 taccgcggac atatgactat cgaggcatcg gggaatgatc agggccgcgt tggcgaccat
     3181 attctgcatc gcgttgaacg ccgccgtggc caccacgtca ctggccaagg aactgaacgt
     3241 cgtctttttg aaccccggcg ccgcccagga catcggcctg tggggcgtcg ccgccaactt
     3301 catgcgcgcc gccgccgacg acctcgacat caacctggaa atcctgttcg ccgaccgcga
     3361 ccattaccgc atgcaggacc aggccaacgc ggtcgccgcc cgcccggtcc agcccgacta
     3421 tgtcatcatg gtcaacgaac gccagcgcgg ccccgccatg ctgcgcgcgt tccaggattc
     3481 ctccgccaag atcgtgttcc tgcacaacgg ccttaccggc gagcagcggg ccgaactggg
     3541 caacgagcga gaagccattc ccaattggat cgccacgatc gtccagaacg aacggcgcgc
     3601 cggctatttg ctgatgcagg aattggcgag cctgcacaaa gggccggcaa aggtcctcgc
     3661 tatctcaggt gaacaggcga cgccggtttc gacgatccgt gaacagggcc tgcgcgacta
     3721 tatcgcccga tcgggcaagg gccgcatcca ggtcctgcag tcggtcaacg gcaattgggg
     3781 gcgccccgac ggccgcgaga agacgcgggg gctgctcacg cgctacgacg acgtcgacat
     3841 catctgggcg gccaacgatt ccatggcgct tggcgccc
//
LOCUS       DATIKR010000526         3275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_213791, whole genome shotgun sequence.
ACCESSION   DATIKR010000526 DATIKR010000000
VERSION     DATIKR010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213791"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VLL76_08175"
     CDS             <1..581
                     /locus_tag="VLL76_08175"
                     /inference="COORDINATES: protein motif:HMM:NF019491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Dabb family protein"
                     /protein_id="HSV29521.1"
                     /translation="PALAEACGVAIVTAPPRRLREEERPQPGLAWFGDILENASSPVT
                     HSISRTDSAIPWSDLVEMAAKAARGHSAACIGRCGSPGRVRELAARCRHRREVEHVVM
                     YNPDGADDARIAEVLEEGVRVLSRIPGVRRVFVGRSITPGGRYAHAWVVRFASEGVVA
                     LYRDHPDHVAFADRHFRPLAPDRMTLDFMDEE"
     gene            complement(969..1892)
                     /gene="dmeF"
                     /locus_tag="VLL76_08180"
     CDS             complement(969..1892)
                     /gene="dmeF"
                     /locus_tag="VLL76_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007461648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family Co(II)/Ni(II) efflux transporter
                     DmeF"
                     /protein_id="HSV29522.1"
                     /translation="MHAHDLDRLQHGHEYEAADQGDVRRVKWVTWLTIVTMVVEIAAG
                     MAFGSMALTADGWHMATHAGALGIALLAYWVARRGAGDRSYTFGTGKVTALGGFTNAI
                     ALALVGLALAWESVQRLFVARTIAYDEALAVAVLGLAVNLASAWLLGGGHHHHDHGHD
                     DDHHHHDHNLRGAYMHVLADAATSVLAIVALAVGKVAGWVWLDPAMGIVGGIVIGRWA
                     WGLARETAGVLLDRDSHDDLNHAIRTRLEAIADVRLTDLHVWWLAPGRHGAIVSLVTA
                     QPQSPDFYKQHLAELGLAHVTVEVNPCGCPE"
     gene            complement(1909..2328)
                     /locus_tag="VLL76_08185"
     CDS             complement(1909..2328)
                     /locus_tag="VLL76_08185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29523.1"
                     /translation="MSILQDYRTGLRDVDAANEGLCFVIERIFDPLVECRRRHGGCDH
                     SACTKIGAILKYAGRNFASHEALMAEGNYPLSAEHSLDHARLIQELESMQASRVCGDR
                     DRTLVRDFVTRWTSRHVHGCDRPLGDWVATRGCRAGE"
     gene            complement(2416..>3275)
                     /locus_tag="VLL76_08190"
     CDS             complement(2416..>3275)
                     /locus_tag="VLL76_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HSV29524.1"
                     /translation="HVVDGELPNPKLPLVPGHEIVGRVEAVGEGADRFRPGDRVGVPW
                     LGWTCGTCKQCCEGRENLCDHARFTGYTIDGGYAEYTVADQRYCFPLPDDYDDAAAAP
                     LLCAGLIGYRSWRMVGDARRVGFWGFGAAAHILAQVARWQGREIYAFSRPGDDAAKRL
                     ALDLGCAWAGDSGTAPPCELDAAIIFAPAGPLVPEALSRVGKGGRVVCAGIHMSDIPS
                     FPYSILWGERSLCSVANLTRRDGDEFLALAPQVPVRAETTIYPLEQADQALSDLRDGR
                     LLGAAVLVP"
BASE COUNT          529 a         1148 c         1104 g          494 t
ORIGIN      
        1 tccccgccct ggccgaggcc tgcggagtcg ccatcgtcac cgccccgccc cgccgcctgc
       61 gcgaggagga acggccgcaa ccgggcctgg cgtggttcgg cgacatcctg gaaaacgcgt
      121 cctcgccggt cacccacagc atcagccgca ccgattccgc catcccatgg tccgatctgg
      181 tggagatggc ggccaaggcg gcgcgcgggc attccgccgc ctgcatcggc cgttgcggct
      241 cgcccggccg ggtccgcgaa ctggccgcca gatgccgcca ccgccgcgag gtcgagcacg
      301 tggtgatgta caacccggac ggcgccgatg acgcccgtat cgccgaggtg ttggaggaag
      361 gggtcagggt gttgtcgcgc atccccggcg tgcggcgcgt cttcgtcggc cgctcgatca
      421 cccccggcgg ccgctatgcc cacgcctggg tcgtccgctt cgcgtctgaa ggcgtggtgg
      481 cgctctatcg cgaccacccc gaccatgtcg ccttcgccga ccgccacttc cgcccgctgg
      541 cccccgaccg catgacgctc gacttcatgg acgaggaata gttatggctc atcgccgata
      601 gcggggatct tatcgctcgt cacacgcggg cttgcccctg gactcgcccc acgtccggtc
      661 tatttggtcg gccaatagac acggataaac acggacgccc gccaaggcgg gcggcacaga
      721 tgaacacgat ccgattgtca tcccgggcaa gcaaagcgcg acccgggatc caggagtcac
      781 gaagaagtcg cgggtcaccc caagcgttca tacacgcggc tctggatccc gggtcaagcc
      841 cgggatgacg cccttctttg tggcagcgca gtgcgcctcc ttggcctccg gcgcatccgt
      901 gtccatccgt gccggcgcgc cagcgccatc cgtgttcttc cgtgtcccat gacggcgatg
      961 aaccatagtc actcgggaca gccgcaaggg ttgacctcga ccgtgacatg ggcgaggccc
     1021 aactcggcca ggtgttgctt gtagaaatcg ggcgattgcg gctgcgcggt gaccagcgag
     1081 acgatggcgc cgtgccggcc gggcgccagc caccacacat gcaaatcggt caggcggacg
     1141 tcggcgatgg cttcgaggcg agtccggatg gcgtggttga ggtcgtcgtg gctgtcgcgg
     1201 tccagcagca ctccggccgt ctcgcgcgcc agcccccacg cccatcgccc gatgacgatg
     1261 ccgccgacga tgcccatggc gggatccagc cacacccagc ccgccacctt gcccaccgcc
     1321 agggcgacga tcgccagcac cgaggtggcg gcgtcggcca gcacgtgcat gtaggcgccg
     1381 cgcagattgt ggtcgtggtg gtgatgatcg tcgtcgtggc cgtggtcgtg atggtggtgg
     1441 ccgccgccca gcagccaggc gctggcgagg ttgaccgcca agcccagcac cgccacggcc
     1501 agggcttcgt cgtaggcgat ggtgcgggcc acgaacagcc gctggaccga ttcccacgcc
     1561 aatgccagcc ccaccagggc cagcgcgatg gcgttggtga agccgcccaa agcggtgacc
     1621 ttgccggtgc cgaaggtgta gctgcgatcg cccgccccgc gccgcgccac ccaataggcc
     1681 agcagcgcga tccccagcgc cccggcatgg gtcgccatgt gccagccgtc ggcggtcagc
     1741 gccatggagc cgaaggccat gccggcggcg atctcgacca ccatggtgac gatggtcagc
     1801 caggtgaccc atttcacccg gcggacgtcg ccctggtcgg cggcttcgta ttcgtggcca
     1861 tgctgcaggc ggtcgaggtc gtgggcatgc atccaggaaa gatgcggcct attcgccggc
     1921 gcggcaaccc cgggtcgcca cccaatcgcc cagcggccgg tcgcagccgt ggacatggcg
     1981 agaggtccag cgggtgacga aatcgcggac cagcgtgcgg tcgcggtcgc cgcagacgcg
     2041 cgacgcctgc atggattcca gctcctggat caggcgggcg tggtccagcg aatgttcggc
     2101 cgacagggga taattgccct cggccatcag cgcctcgtgg gaagcgaagt tgcggcccgc
     2161 gtatttcagg atggcgccga tcttggtgca ggcgctgtgg tcgcaaccgc cgtggcggcg
     2221 gcggcattcc accagcggat cgaagatccg ttcaatgacg aagcacagac cctcgttggc
     2281 ggcatcgacg tcgcgcaggc cggtgcggta gtcctgcaga atgctcattg gacgttccag
     2341 ttcctggaat cgttgctttc cccagccggg accatacgcc cccctgtgcg ttgtttcaat
     2401 tgttgctgat gcaagtcagg gcaccagcac cgccgctccg agcaatcggc cgtcgcgcag
     2461 gtccgacaac gcctggtcgg cctgctccag cggatagatc gtggtctcgg cccgcaccgg
     2521 gacctggggc gccagcgcca ggaattcgtc accgtcgcgg cgggtcaggt tggcaaccga
     2581 gcatagcgac cgctcgcccc acaggatgga atagggaaag gacgggatgt cgctcatgtg
     2641 gatgccggcg cacaccaccc ggccgccctt gcccacccgc gacagcgcct cgggcaccaa
     2701 cggcccggcc ggcgcgaaga tgatggcggc gtcgagttcg caaggaggcg ccgtgccgga
     2761 atcgccggcc caggcgcagc ccagatccag cgccaagcgc ttggccgcgt cgtcgccggg
     2821 ccgcgaaaac gcatagatct cgcgaccctg ccagcgcgcc acctgggcca ggatgtgggc
     2881 ggcggcaccg aagccccaaa agccgacccg ccgcgcgtcg cccaccatcc gccacgagcg
     2941 atagccgatc agcccggcgc atagcagcgg cgcggcggcg gcgtcgtcat agtcatcggg
     3001 cagtggaaag cagtaacgct ggtcggccac cgtgtattcg gcatagccgc cgtcgatggt
     3061 gtagccggtg aaacgggcgt ggtcgcacaa attctcgcgc ccttcgcagc attgcttgca
     3121 ggtgccgcag gtccagccca gccagggcac gccgacgcgg tcgccgggac ggaaccggtc
     3181 ggcgccttcg cccaccgcct cgacccggcc gacgatctcg tggccgggca ccaggggtaa
     3241 tttcgggttg ggcagctcgc catcgacgac gtgaa
//
LOCUS       DATIKR010000527         2908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_188942, whole genome shotgun sequence.
ACCESSION   DATIKR010000527 DATIKR010000000
VERSION     DATIKR010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188942"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..793
                     /locus_tag="VLL76_08195"
     CDS             59..793
                     /locus_tag="VLL76_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HSV29525.1"
                     /translation="MHRFANPARFLRIANVVLPWAALVAALTFAAGLWYGLIASPADY
                     QQSETVRIMYIHVPAAWMGMFCYTAMAVFSAMALIWKHPLADLMARATAPVGAAFTFI
                     CLVTGALWGKPMWGTWWVWDARLTSMLLLFFLYLGYMALADAFDDPERGQKAAAVLAL
                     VGVVNVPIIKFSVDWWHTLHQTASVVKKGGPAIDAAMMVPLILMAVAFKAYYVVILIL
                     RTRAEIASAKLRVIRMAQVHAAGQAE"
     gene            801..998
                     /gene="ccmD"
                     /locus_tag="VLL76_08200"
     CDS             801..998
                     /gene="ccmD"
                     /locus_tag="VLL76_08200"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HSV29526.1"
                     /translation="MDIDAFLSMGGYAGFIWPSYALMLVVLVALLVASLNGARSRENE
                     LDMLQQRRGRRRAAKSEAKAE"
     gene            995..1435
                     /gene="ccmE"
                     /locus_tag="VLL76_08205"
     CDS             995..1435
                     /gene="ccmE"
                     /locus_tag="VLL76_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HSV29527.1"
                     /translation="MTRKQRRLYFVVLGVLAVGAAAALVLTALRQDIVFFFSPTEIVE
                     AKVPTEGRRIRLGGLVEQGSVVKDGATVKFRVTDGAHTVPVVFGGILPDLFREGQGVV
                     TEGKLEGDTFQASEVLAKHDENYMPKEVADSLKKTGHWQGEEKK"
     gene            1452..>2908
                     /locus_tag="VLL76_08210"
     CDS             1452..>2908
                     /locus_tag="VLL76_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HSV29528.1"
                     /translation="MIAEIGHFALIVALAIAIVQAVVPLAGAERRNAALMAVAGPASM
                     AQLLFVGIAFAALTHAYMVSDFSLLNVAQNSHTDKPMLYKVSGVWGNHEGSLLLWITI
                     LAIFGAAVSAFGRNLPPGLKARALAVQAMITVGFLLFILFTSNPFERLEPAPFNGQGL
                     NPLLQDPGLAFHPPFLYLGYVGFSMAFSFAIAALIEGRVDAAWARWVRPWTLAAWIFL
                     TCGIVLGSWWAYYELGWGGWWYWDPVENASFMPWLAGTALLHSAVVVEKRDALKSWTI
                     FLAIITFSLSLLGTFLVRSGVITSVHAFASDPGRGVFILGLLLVVVGGSFTLYAFRAP
                     SLKLGGLFAPLSREGSLLLNNVLMATGAGTVLLGTLYPLFADALDLGKVSVGPPFFNS
                     VFLPLMVPMVLAMGVGPLMSWKRGDLAGALSRLKIAVAVAIAVAVATWVLQGGSAGPW
                     WAAGGMGLAMWLFLGTLTELAERIRLFRVPLGQSLR"
BASE COUNT          376 a          991 c          984 g          557 t
ORIGIN      
        1 atcggcgcgt tcggactccg ctggaattga gcgtggaagg acgttaagac ttaccgccat
       61 gcaccgtttc gccaatcccg cccgcttcct gcggatcgcc aacgtggtcc tgccctgggc
      121 cgcgctggtc gccgccctga ccttcgccgc cggcctgtgg tacggcctga tcgcctcgcc
      181 ggccgactac cagcagagcg agaccgtccg gatcatgtac atccacgtgc cggccgcctg
      241 gatgggcatg ttctgctaca ccgccatggc ggtgttctcg gccatggcgc tgatctggaa
      301 gcatccgctg gccgacctga tggcgcgggc caccgccccc gtcggcgccg ccttcacctt
      361 catctgcctg gtcaccggcg ccctgtgggg caagcccatg tggggcacct ggtgggtgtg
      421 ggacgcgcgc ctgaccagca tgctgctgct gttcttcctg tacttgggct acatggccct
      481 ggccgacgcc ttcgacgacc ccgagcgcgg ccagaaggcc gccgccgtgc tggcgctggt
      541 gggcgtggtc aacgtgccga tcatcaaatt ctcggtggat tggtggcata cgctgcacca
      601 gacggccagc gtggtgaaga agggcggccc ggccatcgac gcggcgatga tggtgccgct
      661 gatcctgatg gcggtggcgt tcaaggccta ttacgtcgtg atcctgatcc tgcggacgcg
      721 cgccgagatc gcctcggcca agctgcgcgt catccgcatg gcgcaggtcc acgcggccgg
      781 acaggcggag tagcccgacc atggatatcg atgctttcct gtccatgggc ggctatgccg
      841 gcttcatctg gccgtcctac gcgctgatgc tggtggtgct ggtggcgctg ctggtggcct
      901 cgctgaacgg cgcgcgctcg cgcgagaacg aactcgacat gctgcagcag aggcgcggcc
      961 gccgccgcgc cgccaaatcg gaggccaagg cagagtgacc cgcaagcagc gccgacttta
     1021 tttcgtcgtc ctgggtgttc tggcggtggg tgccgccgcc gcgctggtgc tgaccgcgct
     1081 gcgccaggac atcgtgttct tcttcagccc caccgagatc gtcgaggcca aggtccccac
     1141 cgagggccgc cgcatccgcc tgggcggcct ggtggaacag ggcagcgtcg tcaaggacgg
     1201 cgccaccgtg aagttccgcg tcaccgacgg cgcccacacg gtgccggtgg tgttcggcgg
     1261 catcctgccc gacctgttcc gcgagggcca gggcgtggtc accgagggca agctggaagg
     1321 cgacaccttc caggcgtccg aggtgctggc caagcacgac gagaattaca tgcccaagga
     1381 agtggccgac agtctgaaga agaccggcca ttggcagggc gaggaaaaga agtagcggtt
     1441 taggagttcc gatgatcgcc gagatcggcc atttcgccct gatcgtcgcc ttggcgatcg
     1501 ccatcgtcca ggccgtggtg ccgctggccg gcgccgagcg ccgcaacgcg gcattgatgg
     1561 ccgtcgccgg ccccgcctcg atggcgcaac tgctgttcgt cggcatcgcc ttcgcggcgc
     1621 tgacccacgc ctacatggtg tcggatttct cgctgctgaa cgtggcgcaa aactcgcaca
     1681 ccgacaagcc gatgctctac aaggtgtcgg gcgtgtgggg caaccacgag ggctcgctgc
     1741 tcttgtggat caccatcctc gccatcttcg gcgccgccgt ctcggccttc ggccgcaacc
     1801 tgccgccggg cctgaaggcg cgggcgctgg cggtgcaggc gatgatcacg gtgggtttcc
     1861 tgctgttcat cctgttcacc tcgaacccgt tcgaacggct ggagccggcg ccgttcaacg
     1921 gccagggcct caacccgctg ctgcaggacc cgggcctcgc cttccatccg cccttcctct
     1981 atctcggcta tgtcggcttc tcgatggcgt tctccttcgc catcgccgcc ctgatcgagg
     2041 gccgcgtcga cgccgcctgg gcgcgctggg tgcggccctg gaccctggcc gcgtggatct
     2101 tcctgacctg cggcatcgtg ctgggctcgt ggtgggccta ttacgagctg ggttggggcg
     2161 gctggtggta ctgggacccg gtggagaacg cttcgttcat gccatggctg gccggcaccg
     2221 cgctgctgca ttccgccgtg gtggtggaaa agcgcgacgc cctgaagtcg tggaccatct
     2281 tcctcgccat catcaccttc tcgctcagcc tgctgggcac cttcctggtg cgttcgggcg
     2341 tcatcaccag cgtgcacgcc ttcgcctccg atcccggtcg cggcgtgttc atcctgggcc
     2401 tgttgctggt ggtggtcggc ggttccttca ccctttatgc cttccgcgcc ccgtcgctga
     2461 aactgggcgg cctgttcgcg ccgctgtcgc gcgaaggctc gctgctgctc aacaacgtgc
     2521 tgatggcgac cggcgccggc accgtgctgc tgggcacgct gtacccgctg ttcgccgacg
     2581 cgctggacct gggcaaggtc tcggtcggcc cgcccttctt caattcggtg ttcctgcctc
     2641 tgatggtgcc gatggtgctg gccatgggcg tcggcccgct gatgtcttgg aagcgcggtg
     2701 accttgccgg cgccctgtcg cgcctgaaga tcgcggtcgc cgtggccatc gcggtggcgg
     2761 tcgccacctg ggtgctgcag ggcggctcgg ccggtccgtg gtgggccgcc ggcggcatgg
     2821 gcctcgccat gtggctgttc cttggcaccc tgaccgagct ggccgagcgc atccgcctgt
     2881 tccgcgtgcc gctgggccag tcgctgcg
//
LOCUS       DATIKR010000528         1956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_177606, whole genome shotgun sequence.
ACCESSION   DATIKR010000528 DATIKR010000000
VERSION     DATIKR010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177606"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VLL76_08215"
     CDS             complement(<1..633)
                     /locus_tag="VLL76_08215"
                     /inference="COORDINATES: protein motif:HMM:NF012821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29529.1"
                     /translation="MTVATAHDDRLIVSGRLAQPGRNCARVAHADRLGMVVDGDEYFR
                     ALRHAILNARRSILMLGWEFDSRTRLLRGGAAGDEDEIGTLLDRVVRSRPGLEAHILI
                     WDSALIYAFSREFGGLIKMDWLTHRRLHFRLDDSHPLGASHHQKIVVVDEAVAFVGGF
                     DVSSQRWDTRAHEPRDPRRSDPAAPRYPPFHDVMAIVTGDVVRALADICRQ"
     gene            complement(661..1362)
                     /locus_tag="VLL76_08220"
     CDS             complement(661..1362)
                     /locus_tag="VLL76_08220"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HSV29530.1"
                     /translation="MPLAKLRLALAFPLLCLLPLPVLAGYAEGVAAYGRGAHDVAAAE
                     FRAAAEAGDVESAYMLARLYALGSGVPQDWAQAWAWHDRAARQGHEEARDARDSLASI
                     MTPAQMAQARSLAAPPPAVAAPALRDSRQQVVIIPRESVPAGPPVRLSAPIATYEGLA
                     GSTGSLEDQTRLVQRELNRRGYFAGAVDGRLGPQTRQAIRAYQADAGIAADGRMTADL
                     VDRLAGAATQQAELR"
     gene            complement(1440..>1956)
                     /locus_tag="VLL76_08225"
     CDS             complement(1440..>1956)
                     /locus_tag="VLL76_08225"
                     /inference="COORDINATES: protein motif:HMM:NF021472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HSV29531.1"
                     /translation="RRLGDGNATGLGGALAAIGRNPVQIGLVGVFLVLAFAAWVRLAI
                     MIFMLFFGSAPPSLDGLTDAILFSDNSVAFLAVGGIVGGMLAAGVFAMTVIAIPMLID
                     RPDCDAMTAMLTSLDATRRNWRPMILWAGLIALFTLLGLSMFFVGLVITLPLVGHASW
                     HAYRDLVEEPH"
BASE COUNT          315 a          674 c          719 g          248 t
ORIGIN      
        1 ctggcggcag atgtcggcca aggcgcgcac gacgtcgccg gtgacgatgg ccatgacgtc
       61 gtggaacggc ggatagcggg gcgccgccgg gtcgctgcgg cgggggtcgc gcggttcgtg
      121 ggcgcgggtg tcccagcgct ggctggagac gtcgaacccg ccgacgaagg ccacagcctc
      181 gtccaccacc acgatcttct ggtggtgcga agcgcccagc ggatgactgt cgtcgaggcg
      241 gaaatgcagg cggcggtggg tcagccaatc catcttgatc aggccgccga attcgcggct
      301 gaaggcatag atcagcgccg aatcccagat caggatgtgg gcctccaggc ccggccggct
      361 gcgcaccacc cggtccagca gcgtcccgat ctcgtcctcg tcgcccgccg cgccgccgcg
      421 cagcagccgg gtgcggctgt cgaattccca gcccagcatg aggatcgacc gccgggcatt
      481 gaggatcgcg tggcgcaggg cgcggaaata ctcgtcgcca tccaccacca tgcccagccg
      541 gtcggcatgg gcgacgcgcg cgcaattacg ccccggctgc gccagccggc cggaaacgat
      601 gagacgatcg tcatgagccg tcgcgacggt catgggccag gagatgggag gcggcggctc
      661 ctagcgcaac tccgcctgct gcgtcgcggc accggccagg cggtccacca ggtcggcggt
      721 catgcggccg tcggcggcga tgccggcatc ggcctggtag gcgcggatgg cctgtctggt
      781 ctgggggccg aggcggccgt ccacggcgcc ggcgaaatag ccccggcggt tgagttcccg
      841 ctgcaccagc cgggtctggt cctcgaggct gccggtcgag ccggccaggc cctcataggt
      901 ggcgatgggc gccgacagcc gcaccggcgg gccggccggc acggattcac gcgggatgat
      961 caccacctgc tggcggctgt cccggagggc cggtgccgcg actgccgggg gcggcgcggc
     1021 caggctgcgc gcctgcgcca tctgcgccgg cgtcatgatg gaagccaggc tgtcgcgggc
     1081 gtcgcgggcc tcttcgtggc cctggcgggc ggcgcggtcg tgccaggccc aggcctgcgc
     1141 ccaatcctgc ggcacgcccg atcccagcgc gtacagccgc gccagcatgt aggccgattc
     1201 cacgtcgccg gcctcggcgg cggcacggaa ctcggcggcc gcgacatcat gcgcgccacg
     1261 gccataggcg gcgacgccct cggcatagcc ggccagaacc ggcaggggca gcaggcacag
     1321 caacggaaat gcgagcgcaa ggcgaagctt ggcgagcggc atcgggcggc acctctccga
     1381 acgggtttct cgtccggtat gtcgcggtgc cgcccgtgcg attcaccctc tccctgcggt
     1441 cagtgcggct cctccacgag gtcgcggtag gcatgccagg aggcatggcc gaccagcggc
     1501 agggtgatga ccagcccgac gaagaacatg gacaggccga gcagcgtgaa aagggcgatc
     1561 aatccggccc acaggatcat cggccgccag ttccggcggg tggcgtccag gctggtcagc
     1621 atcgcagtca tggcgtcgca atcgggccgg tcgatcagca tgggaatggc aatgaccgtc
     1681 atggcgaaca cgcccgccgc cagcatgccg ccgacaatgc cgccgacggc caggaaggcg
     1741 acggaattgt ccgagaacag gatggcgtcg gtcaggccgt ccagcgacgg cggcgcactg
     1801 ccgaagaaca gcatgaagat catgatcgcc agccgcaccc aggcggcgaa ggccagcacc
     1861 aggaagacgc cgaccagacc gatctgcacg gggttgcggc cgatggcggc cagcgccccg
     1921 cccaggccgg tggcgttgcc gtcacccaga cgccgg
//
LOCUS       DATIKR010000529         3041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_44583, whole genome shotgun sequence.
ACCESSION   DATIKR010000529 DATIKR010000000
VERSION     DATIKR010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3041
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44583"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1662
                     /locus_tag="VLL76_08230"
     CDS             85..1662
                     /locus_tag="VLL76_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29532.1"
                     /translation="MDNVLVVDDEPQILTAITDLLEDEFTVWTAGDGETALNILAVQE
                     MAVILSDQRMPGMTGSEFLGRARDLSDATRVLVTGYSDLDALVKAVNQGQIHAYLSKP
                     WNPMELKVVVRTAADRWRLGRTLQHERNLLHALMDNVPDAIFFKDRDLTFTRVNGAQA
                     ELLGVRNADSMIGRTLSDVLGGGARATEAEERDLVARGVPLVDKVEPVVDANGATAWY
                     SITKVPIREGGEVAGLVGIARDITKRKQAEDYLRRAHDELQKAVEERTSWLRQEIKRR
                     AQAEDSARAARDAAEAASRAKTIFLANMSHELRTPLNAIIGFSELAVTVMDPAEIDKY
                     GGYLSNITESAHHLLRVINDILDVSRVEVGKVTLREESVAVADVVGSALRLVGHVAAT
                     KRQTLSFDIPESFPCLRADERLLKQILLNILSNATKFSPEGGHVAVKADLVEGAVVIE
                     IADDGVGIAPDDIPVVLQPFGQVENTMAPKHEGTGLGLPLAKGFMELHGGSLSLVSEV
                     GKGTRITLAFPASRTLP"
     gene            complement(1659..2456)
                     /locus_tag="VLL76_08235"
     CDS             complement(1659..2456)
                     /locus_tag="VLL76_08235"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HSV29533.1"
                     /translation="MDILLQAVLLGVVEGLTEFLPVSSTGHLILLGDLLGFQGPPGKT
                     FEIVIQLGAILAVCVVYWRRLWDAGTGIVHDAASRAFVRNILIGFLPAMVVGVVAYKH
                     IKALLNSPLVVAVALVVGGVVILVLERVNKKPRFHAVEDFPMPLALKVGIFQCIAMIP
                     GVSRSGATIMGALMVGVERRAAAEFSFFLAIPTMMGATAYSLYKNWADLSFDNLGLIA
                     AGFAAAFLAALVVVKAAIAFIGRHGFAPFAWYRIGFGGLMLVVLLTR"
     gene            complement(2548..>3041)
                     /locus_tag="VLL76_08240"
     CDS             complement(2548..>3041)
                     /locus_tag="VLL76_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29534.1"
                     /translation="LKERTGAPKKVYRGDGRGMDQNSLANLTNVQGITAQGTLDLTFA
                     GAVRHVCSNTDPGGVISTTADIDCAVHFAINSHPYGLVYEMEVTDYVDMCKVLSDRNF
                     KNRYEAQKEFIVPKRISKAQIKKVMLYRKGGVPNDIWTSGTLLAYRNVNHGTLGDVVV
                     VQQ"
BASE COUNT          570 a          994 c          981 g          496 t
ORIGIN      
        1 tgtgcacagc caatcggggc atgggaccga gatgagggtg atcatcccgc gcggtctcaa
       61 gggctgatga aaaaaggatt tgagatggac aacgtcctcg tcgtcgacga cgagccgcag
      121 atcctcaccg ccatcaccga cctgctggag gacgagttca ccgtgtggac cgccggcgac
      181 ggcgagacag cgctgaacat cctggcggtg caggagatgg cggtcatcct gtcggaccag
      241 cgcatgccgg ggatgaccgg ctcggaattc ctgggccgcg cccgcgacct gtcggacgcc
      301 acccgcgtgc tggtgaccgg ctattccgac ctcgacgccc tggtcaaggc ggtcaaccag
      361 ggccagatcc acgcctatct gtccaagccg tggaacccca tggagctgaa ggtggtggtg
      421 cgcaccgccg ccgaccgctg gcgcctgggc cgtaccttgc agcacgagcg caacctgctg
      481 catgctctga tggacaacgt ccccgacgcc atcttcttca aggaccgcga cctcaccttc
      541 acccgcgtca acggggcgca ggccgaattg ctgggcgtca ggaacgccga cagcatgatc
      601 ggccgcaccc tgtcggacgt gttgggcggc ggcgcccgcg cgaccgaggc cgaggaacgc
      661 gacctggtgg cgcgcggggt gccgctggtg gacaaggtcg agccggtggt cgacgccaac
      721 ggcgccaccg cctggtactc gatcaccaag gtgccgatcc gcgagggcgg cgaggtggcc
      781 ggcctggtcg gcatcgcccg cgacatcacc aagcgcaagc aggccgagga ctatctgcgc
      841 cgcgcccacg acgaattgca gaaggcggtg gaggagcgta ccagttggct gcgccaggag
      901 atcaagcgcc gcgcccaggc cgaggacagc gcgcgcgccg cccgcgatgc cgccgaggcc
      961 gccagccgcg ccaagaccat cttcctggcc aacatgagcc acgaactgcg caccccgctc
     1021 aacgccatca tcggtttttc cgagttggcg gtgacggtga tggaccccgc cgagatcgac
     1081 aaatacggcg gctatctctc gaacatcacc gagtcggcgc accatctgct gcgcgtcatc
     1141 aacgacattc tggacgtctc acgcgtcgag gtcggcaagg tcaccttgcg cgaggaaagc
     1201 gtggcggtgg ccgacgtggt gggttccgcg ttgcggcttg tcggccatgt cgccgccacc
     1261 aagcgccaga ccctgtcctt cgacatcccc gagtcgttcc cctgtctgcg cgccgacgag
     1321 cggctgctga aacagatcct gctcaacatc ctgtccaacg ccaccaagtt cagccccgag
     1381 ggcggccatg tggcggtcaa ggcggacctg gtggagggtg cggtggtgat cgagatcgcc
     1441 gacgacggcg tcggcatcgc ccccgacgac attccggtgg tgctgcagcc cttcggccag
     1501 gtcgagaaca ccatggcgcc caagcacgaa ggcaccggcc tgggcctgcc gctggccaag
     1561 ggcttcatgg aactgcacgg cgggagcctg tcgctggtgt ccgaggtcgg caagggcacc
     1621 cgcatcaccc ttgccttccc ggcgtcgcgg acgctgccct agcgggtcag caggaccacc
     1681 agcatcagcc cgccgaagcc gatgcgatac caggcgaacg gcgcgaagcc gtggcggccg
     1741 atgaaggcga tggcggcctt gaccaccacc agcgcggcca ggaaggcggc ggcgaagccg
     1801 gcggcgatca ggcccagatt gtcgaacgac aggtcggccc agttcttgta gagcgaatag
     1861 gcggtggcgc ccatcatggt cgggatcgcc aggaagaacg agaactcggc cgccgcccgg
     1921 cgctccaccc ccaccatcag cgcccccatg atggtggcgc ccgagcgcga cacgccgggg
     1981 atcatggcga tgcactggaa gatgccgacc ttgagggcca gcggcatggg gaagtcctcg
     2041 acggcgtgga agcgcggctt cttgttgacc cgctcaagca ccaggatcac cacgccgccc
     2101 accaccagcg ccaccgccac caccagcggc gagttcagca gcgccttgat gtgcttgtag
     2161 gccaccacgc ccaccaccat ggccggcagg aagccgatca ggatgttgcg cacgaacgcc
     2221 cgcgacgcag cgtcgtggac gattccggtg ccggcatccc acaggcggcg ccagtagacg
     2281 acgcacacgg ccaggatggc acccaattgg atgacgatct cgaaggtctt gcctggcggc
     2341 ccctggaagc cgagcaggtc gcccagcagg atcaggtggc cggtcgatga caccggcagg
     2401 aactcggtga ggccctcgac cacgccgagc agcacggctt gcaacagaat gtccatggaa
     2461 tgtcctggat ggtgggtgcg gccggatgat gccgccgcgc gccggggggt gcaacgggca
     2521 aaagaggggt atctgacgga agtgtggtca ctgttgcacg accacgacgt cgcccaaagt
     2581 tccgtggttc acgttgcgat atgcaagcaa tgttccgctg gtccagatgt cgttcggaac
     2641 gccgcccttc ctgtaaagca tgactttctt gatttgcgct ttgctgatcc tctttggaac
     2701 aatgaactcc ttttgcgcct cgtatcgatt tttgaaattc ctgtcactga ggaccttgca
     2761 catatcaacg taatcggtga cttccatctc gtagacgagg ccgtacggat ggctgttgat
     2821 ggcaaagtgg acggcgcagt cgatgtctgc ggtcgttgaa atcacaccgc cggggtctgt
     2881 attcgaacaa acatgcctga ccgcgccagc aaaggtcagg tcaagcgttc cttgggcggt
     2941 gatcccttgc acgtttgtca aattggccaa tgaattttgg tccattcccc ttccgtcgcc
     3001 gcgataaact ttctttggcg ctccggtcct ctccttcaaa t
//
LOCUS       DATIKR010000530         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_19526, whole genome shotgun sequence.
ACCESSION   DATIKR010000530 DATIKR010000000
VERSION     DATIKR010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19526"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VLL76_08245"
     CDS             <1..384
                     /locus_tag="VLL76_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HSV29535.1"
                     /translation="HFVVEMSGTDSVSADLEWPMWMIYSAIPAGSYLMCFRFLQVCWH
                     FMRTGELPHHDHGHVEGLEEDSKDPQRAAQDINWYEMDDGLHPKDIAHHEGGDASAGD
                     GNSVKGAKDRNWEGGDASAKQEDRK"
     gene            381..1664
                     /locus_tag="VLL76_08250"
     CDS             381..1664
                     /locus_tag="VLL76_08250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSV29536.1"
                     /translation="MNAAIIFGLLLALMLTGMPISISLGLTVLTFLFTMTQVPIEAVA
                     LKLFTGIEKFEIMAIPFFILAGNFLTHGGVARRMINFATAMVGHWHGGLGLAGVLACA
                     LFAAVSGSSPATVVAIGSIILPAMVKQGFPARFGAGVITTSGALGILIPPSIVMVMYA
                     VATNTSVGQLFMAGVIPGLMLATMLGLMTWYRAWKNDYPRLPKAGMVERLKAFKDAFW
                     GLALIIIVIGGIYSGAFTPTEAAAMSAVYAFLIAVFVYKDMPLRAVPRILLSSASMSA
                     MLLYIITNAVLFSFVLANEGIPHAIADWIVAKDLGIIAFLLVVNILLLAAGNFMEPSS
                     IVLIMAPILFPVAMKLGIDPVHFGIMMVVNMEVGMCHPPVGLNLYVASGITKMGITEL
                     TIAVMPWLMTMLVFLVMVTYIPEISLWLPKLLGMM"
     gene            1774..>2043
                     /locus_tag="VLL76_08255"
     CDS             1774..>2043
                     /locus_tag="VLL76_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HSV29537.1"
                     /translation="MRIRVLAALALLSLSSCTSIAPNDHRLTGRIWEPASGTFVERDR
                     VLAQAVAADAVLLGETHDNPEHHALQAWVVRELVAAGRKPVVAFEM"
BASE COUNT          317 a          690 c          643 g          393 t
ORIGIN      
        1 cacttcgtgg tcgagatgtc gggcaccgac tcggtgtcag ccgacctcga atggccgatg
       61 tggatgatct attccgccat cccggccggt tcctacctga tgtgcttccg cttcctgcag
      121 gtgtgctggc acttcatgcg caccggcgag ctgccgcacc acgaccacgg ccatgtcgaa
      181 ggcctggaag aggacagcaa ggacccgcag cgcgccgccc aggacatcaa ctggtacgaa
      241 atggacgacg gcctgcatcc caaggacatc gcccaccacg agggcggcga cgcctcggcc
      301 ggtgacggca acagcgtcaa gggcgccaag gacaggaatt gggagggcgg cgacgcctcc
      361 gccaagcagg aggaccgcaa atgaacgccg ccatcatctt cggcctgctg ctggccctga
      421 tgctgaccgg catgcccatc tcgatctcgc tgggcctgac ggttctcacc ttcctcttca
      481 ccatgaccca ggtgcccatc gaggcggtgg cgctgaagct gttcaccggc atcgagaagt
      541 tcgagatcat ggcgatcccg ttcttcatcc tggcgggcaa cttcctgacc catggcggcg
      601 tcgcgcgccg catgatcaac ttcgccaccg ccatggtcgg gcattggcat ggcggcctgg
      661 gcctggccgg cgtgctggcc tgcgccctgt tcgccgccgt gtccggctcg tcgcccgcca
      721 ccgtggtggc catcggctcg atcatcctgc ccgccatggt caagcagggc ttccccgccc
      781 gcttcggcgc cggcgtcatc accacctcgg gcgcgctggg catcctgatc ccgccgtcca
      841 tcgtcatggt gatgtacgcg gtcgccacca acacctcggt gggccagttg ttcatggccg
      901 gcgtcatccc cggcctgatg ctggcgacca tgctgggcct gatgacgtgg taccgcgcct
      961 ggaagaacga ctacccgcgt ctgcccaagg ccgggatggt cgaacgcctg aaggccttca
     1021 aggatgcctt ctggggcctg gcgctgatca tcatcgtcat cggcggcatc tattccggcg
     1081 cgttcacgcc gaccgaggcg gcggccatga gcgcggtcta cgcgttcctg atcgcggtct
     1141 tcgtctacaa ggacatgccg ctgagggcgg tgccgcgcat cctgttgtcc tcggccagca
     1201 tgtcggcgat gctgctctac atcatcacca acgcggtgct gttctcgttc gtgctcgcca
     1261 acgagggcat cccgcacgcc atcgccgact ggatcgtcgc caaggacctg ggcatcatcg
     1321 ccttcctgct ggtggtcaac atcctgctgc tggccgccgg caacttcatg gagccgtcgt
     1381 ccatcgtgct gatcatggcg ccgatcctgt tcccggtcgc catgaagctg ggcatcgacc
     1441 cggtgcattt cggcatcatg atggtggtca acatggaggt cggcatgtgc cacccgccgg
     1501 tgggcctgaa cctctatgtc gcctcgggca tcaccaagat gggcatcacg gaactcacca
     1561 tcgcggtgat gccgtggctg atgaccatgc tggtgttcct ggtgatggtc acgtacatcc
     1621 cggaaatctc gctgtggctg cccaagttac tgggcatgat gtaggccacg ggccatacgg
     1681 atgagagagg ccggccgcgc gagtggtcgg ccttttcttt tgcccgcgcg cctctacatt
     1741 ggatgcagca ccaccggatg gatgaccccg cctatgcgca ttcgcgtcct cgccgccctg
     1801 gccctgcttt ccctgagttc ctgcacgtcc attgcgccca atgaccatcg gctgaccggc
     1861 aggatctggg agccggcctc gggaaccttc gtcgagcgcg accgggtgtt ggcccaggcg
     1921 gtggctgccg atgccgtcct gctgggcgag acccacgaca accccgagca tcatgcgctg
     1981 caggcttggg tggtgcggga attggtggcc gccgggcgca agccggtggt ggccttcgag
     2041 atg
//
LOCUS       DATIKR010000531         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_128581, whole genome shotgun sequence.
ACCESSION   DATIKR010000531 DATIKR010000000
VERSION     DATIKR010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128581"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VLL76_08260"
     CDS             complement(<1..506)
                     /locus_tag="VLL76_08260"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV29538.1"
                     /translation="MKHPATKRISPAGALAAIYGTFGALWIVLSDATVAMLFRDPDVL
                     TVIQTSKGWLFVVLSAVLILVAGSRLMRALEASDERYRLLFADNPQPMALYDPATFRF
                     IEANGAATRVFGYQPDEIAGMPVLELLVPEDRPQITALMEKARTSHEGRESIWTIRCK
                     DARVVQVEA"
     gene            659..1501
                     /locus_tag="VLL76_08265"
     CDS             659..1501
                     /locus_tag="VLL76_08265"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSV29539.1"
                     /translation="MKIFSARRGALALGLIAGLAAMPAFAADKDPVVAVVNGTEIRAS
                     AVQAYQRNLPPQVAMQAPFEALLEIVINNHLVYEAAKKDNVQADPEIQELVRQFERQQ
                     VVKTWVGRKVRAEVTDEALKKAYDAALATYKPSEEVHARHVLTESEGEAKKIIGELKK
                     GGDFAAIAKAKSIDPSAKQNGGDLGYFSKEEMVPQFAEAAFAMKPGEISAKPVKTQFG
                     WHVIKVEDKRMSTPPTFDQAKPALRDQVADQTAERIVTDIRSKAAVKKFNADGSPMAE
                     GEKK"
BASE COUNT          302 a          538 c          529 g          222 t
ORIGIN      
        1 gcctcgacct ggaccacgcg ggcatccttg cagcggatgg tccagatgga ctcgcggccc
       61 tcgtgcgagg tgcgcgcctt ctccatcagg gcggtgatct gcggcctgtc ttcgggcacc
      121 agcagttcca gcaccggcat gccggcgatc tcgtccggct ggtagccgaa cacgcgggtg
      181 gcggcgccat tggcctcgat gaagcggaag gtggcggggt cgtacagcgc catgggctgc
      241 gggttgtcgg cgaacagcag gcgatagcgc tcgtccgagg cttccagcgc ccgcatcagc
      301 cgcgagccgg ccaccaggat cagcaccgcg ctcagcacga cgaacagcca gcccttcgag
      361 gtctggatca ccgtcagcac gtcggggtcg cgaaacagca tggcgacggt ggcgtcggac
      421 agcacgatcc acaaggcccc gaaggtgccg tagatcgccg ccagcgcccc cgccggggat
      481 attcttttgg ttgcagggtg cttcatatcg accactcctg cctcaaccca ccggtcagga
      541 taccatcggc cggcggccag gtaacgcgca atcggcgcga gggcaaggcc gctcttgtgc
      601 ggggctgccg gttgtgcttc aacccttgga accctccgcg acaaggatgc gaacgaccat
      661 gaagatcttc tccgcccgcc gtggcgcgct ggccctgggc ctgatcgccg gcctggccgc
      721 catgcccgcc ttcgccgccg acaaggaccc cgtcgtcgcc gtggtcaacg gcaccgagat
      781 ccgcgcttcg gcggtccagg cctatcagcg caacctgccg ccgcaggtgg cgatgcaggc
      841 gccgttcgag gcgctgctgg agatcgtcat caacaatcac ctggtctacg aggcggccaa
      901 gaaggacaac gtccaggccg atcccgagat ccaggaactg gtgcggcagt tcgaacgcca
      961 acaggtggtg aagacctggg tcggccgcaa ggtccgcgcc gaggtcaccg acgaggcgct
     1021 gaagaaagcc tacgatgccg ccctggcgac ctacaagccg tcggaagagg tgcacgcccg
     1081 ccacgtcctc accgaatccg agggcgaagc caagaagatc atcggcgagt tgaagaaggg
     1141 cggcgacttc gccgccatcg ccaaggccaa gtccatcgac ccgtcggcca agcagaacgg
     1201 cggcgacctg ggctatttct cgaaggaaga gatggtgccg caattcgccg aggccgcctt
     1261 cgccatgaag ccgggcgaga tttcggccaa gccggtcaag acgcagttcg gctggcacgt
     1321 catcaaggtc gaggacaagc gcatgtccac cccgccgacc ttcgaccagg ccaagccggc
     1381 gctgcgcgac caggtcgccg accagaccgc cgagcgcatc gtcaccgaca tccgctccaa
     1441 ggcggcggtc aagaagttca acgccgacgg ctcgcccatg gccgaaggcg agaagaagta
     1501 agcacggaac cccgatgagc ggacctcatc ggggttcgcc taggcccaag gggccgcgcg
     1561 gcttatgccg cgggaggcaa ggggcgcgga g
//
LOCUS       DATIKR010000532         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_201320, whole genome shotgun sequence.
ACCESSION   DATIKR010000532 DATIKR010000000
VERSION     DATIKR010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201320"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1232)
                     /locus_tag="VLL76_08270"
     CDS             complement(<1..1232)
                     /locus_tag="VLL76_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 17 protein"
                     /protein_id="HSV29540.1"
                     /translation="MRLSGFVVLLLIVLGNLGFWALMNRPQSGLPWSGTINSVSFSPS
                     RADDDPTIVRQQPWLDQTMLATREEMDEDLAMLAGTVDQVRTYSTLEGLDIVPELAAK
                     HGIKALPGAWLDERLARNEVELRNIVRIARDNPNVERVMIGNENLTLHRLTPDQMVRY
                     LKRARAELPAHVKISTAEAWSIWLEHPELVEAVDYITIHTLPFWERVDIEEAMDFTKR
                     MVREVRKAYPDKPIFIGEVGWPSAGRSYGNAEPSLVNQALFLRRFLNWADEEGLDYNV
                     VEAFDQPWKVNLDGTASEKHWGIFTVDRQPKFNWIGSVIEFKEWPFQAAAATLIAFLP
                     IVWFLGKWKALRLPGKIFFGMLVQFAATLVIWTMSTPMVRDLAPATSLMVGVLLPAQL
                     LLLVVVLINGIELTELTWA"
     gene            1550..>1689
                     /locus_tag="VLL76_08275"
     CDS             1550..>1689
                     /locus_tag="VLL76_08275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017623519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tex-like N-terminal domain-containing protein"
                     /protein_id="HSV29541.1"
                     /translation="MSKSIPARIAEELGVRDAQVAAAVQMLDEGSTVPFIARYRKEAT
                     GGL"
BASE COUNT          300 a          528 c          577 g          284 t
ORIGIN      
        1 gcccaggtca gttcggtcag ctcgatgccg ttgatcagca ccaccaccag cagcagcaac
       61 tgcgccggca gcagcacgcc caccatcagc gaggtggcgg gcgccaggtc gcgcaccatg
      121 ggggtcgaca tggtccagat caccagggtg gcggcgaatt gcaccagcat gccgaagaag
      181 atcttgccgg gcaggcgcag cgccttccac ttgcccagga accacacgat cggcaggaag
      241 gcgatcaggg tggcggcggc ggcctggaac ggccattcct tgaactcgat gaccgagccg
      301 atccagttga acttgggctg gcggtcgacg gtgaagatgc cccagtgctt ttccgaggcg
      361 gtgccgtcca aattgacctt ccacggctgg tcgaacgcct cgacgacgtt gtagtccagg
      421 ccttcctcgt ccgcccagtt gaggaagcgg cgcaggaaca gggcctggtt gaccagcgac
      481 ggctcggcgt tgccatagga acggccggcg ctcggccagc cgacctcgcc gatgaagatg
      541 ggcttgtcgg gataggcttt gcggacttcg cgcaccatgc gcttggtgaa gtccatggcc
      601 tcttcgatat cgacgcgctc ccagaatggc agcgtgtgga tggtgatgta gtccaccgcc
      661 tcgaccagtt cggggtgttc cagccagatc gaccatgcct cggctgtcga gatcttgacg
      721 tgggccggca gctcggcgcg ggcgcgcttg agatagcgca ccatctggtc cggggtcagg
      781 cggtgcagcg tcaggttctc gttgccgatc atcacccgtt cgacgttcgg gttgtcgcgg
      841 gcgatcctga cgatgttgcg cagctcgact tcgttgcggg ccaggcgttc gtccagccag
      901 gcgccgggca gggccttgat gccgtgcttg gccgccagct cggggacgat gtcgaggcct
      961 tccagcgtcg aataggtgcg gacctggtcg acggtcccgg ccagcatggc caggtcctcg
     1021 tccatttcct cgcgcgtcgc cagcatggtc tggtcgagcc agggctgctg acggacgatg
     1081 gtgggatcgt cgtcggcgcg gctggggctg aaggacaccg aattgatggt gcccgaccac
     1141 ggcaggccgg attgcggcct gttcatgagg gcccagaaac ccaggttgcc caggacgatc
     1201 agcagcagga ccacaaagcc ggaaagacgc atggaagccc gtattcagtt gtgcggggac
     1261 agaaaggttc tgccgaaatc aagacgcgaa cgatgttggc aggcgccgga tcggtcccct
     1321 cggcggaacc ggcgttgacc cttggaaaga cgaccgcgcc caagtgtggc gaacggccga
     1381 atacgttacc caaaaaggca tgggctgtcc aggtgggccg gggtaggggc ccgcctgccc
     1441 ggatattgcg ccacgtccct gtggcggaat tgtggcccgc acggggggct tcccgccggg
     1501 cgcggtctgg agtaaaccca gcatccgttc gaacccagcc aggggaagca tgagcaagtc
     1561 catcccagcc cgcatcgccg aggaactcgg cgttcgcgac gcccaagtcg ccgccgccgt
     1621 ccagatgctg gatgaaggct cgaccgtgcc cttcatcgcg cgctaccgca aggaagccac
     1681 cggcggcct
//
LOCUS       DATIKR010000533         2686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_80896, whole genome shotgun sequence.
ACCESSION   DATIKR010000533 DATIKR010000000
VERSION     DATIKR010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80896"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /gene="rimP"
                     /locus_tag="VLL76_08280"
     CDS             complement(<1..410)
                     /gene="rimP"
                     /locus_tag="VLL76_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HSV29542.1"
                     /translation="MDQQRLEALIAPSLEAMGYELVRAMFQGRQRPTLQVMAERKDGK
                     GMTVDDCADISRSLSALLDVEDPIEGAYNLEVSSPGIDRPLTRPKDFETWAGFEAKIE
                     AFHGVDGRKRFRGRLGGLDQDRARIQTETGEAAIP"
     gene            complement(584..1792)
                     /locus_tag="VLL76_08285"
     CDS             complement(584..1792)
                     /locus_tag="VLL76_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007679332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HSV29543.1"
                     /translation="MSTPPAHPPTALSVRVLLTALVAFGPISTDLYLASLPDMARAFA
                     TDVETTQLTLSAFLVGMAVSMPVYGPLSDRFGRRPVILGGVLIYLLASVFCVFAPSIE
                     AVVAGRFFQALGACCGPVVGRAVVRDVFPRDQAARVLSYMASAMALAPFAAPILGGWL
                     HSLFGWRANFVVLVLFGVMLFAGVWRLLAETNGHKDRDALSPSAMLVNYGALLRDRAV
                     LGYGLTVMCAFGGMFTFISGSSFVLIDVLGLTPRHFGLGFAVVIAGYIVGAFLAGRLT
                     HRFGLDRMIRLGTLLCAGSGVVAAGLAWAGVQTFASVLLPLSVYFLAAGLALPNATAG
                     ALGPHPRMAGAASALVGFLQMVGGAVAGWLTAAAFDGSARSMVTVTAVLGVASWLVFR
                     ALAARPEANS"
     gene            complement(1810..2502)
                     /locus_tag="VLL76_08290"
     CDS             complement(1810..2502)
                     /locus_tag="VLL76_08290"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HSV29544.1"
                     /translation="MSTTLTLDLGGHSVTIALKRSALARRLSLRIDPAVGPVMVLPQR
                     TSLREAEKFALANRVWLAERLARLPGRVAFEPGAVVPLLGAGHAIHHEPGARRGVWLE
                     DGAIKVSGQPDFVARRVGDFLKAEAKRLILPRAHELADRIGRKPGRISVKDTRSRWGS
                     CSAKGDLAFSWRLVLAPERILTYVVAHEVAHLAELNHSPAFWAVVATLTPDHAHARAW
                     LKSHGARLHRYG"
BASE COUNT          507 a          953 c          892 g          334 t
ORIGIN      
        1 gggatggccg cctcgccggt ctcggtttga atgcgcgcgc ggtcctggtc cagaccgccc
       61 agccgcccgc ggaaccgctt gcggccgtcg acaccgtgga acgcctcgat cttcgcctcg
      121 aagccggccc aggtctcgaa atccttgggt cgcgtcagcg ggcggtcgat gccgggcgag
      181 ctgacctcca gattgtaggc cccctcgatg gggtcctcga cgtccagaag tgcggacagc
      241 gagcgggaga tgtcggcgca atcgtcgacc gtcatcccct tgccgtcctt gcgctcggcc
      301 atgacctgca gggtcggacg ctggcggccc tggaacatcg cccgcaccag ctcgtagccc
      361 atggcttcga gcgacggtgc gatgagagct tccaaacgct gctgatccat accgtgcctt
      421 cgcaacccag tcttaaaaaa gcaaaaaagt gggccatagg cccaccctta caaccccgtc
      481 ctcctgcggt taaaggcatc ttggacggga agcaagaatg tgtcttgccg ggaaaatacg
      541 ctgaatttcg ccgcaatggc aagcggaacc tcccccgccc gccttaagag ttggcctccg
      601 gccgtgccgc caaggcgcgg aacaccagcc aggacgccac tcccagcacc gccgtgacgg
      661 tgaccatcga gcgcgccgaa ccgtcgaaag ccgccgccgt cagccaaccg gcgacggcgc
      721 cccccaccat ctggagaaac cccaccagcg ccgaggcggc gccggccatg cgcggatgcg
      781 gccccagggc gccggcggtg gcgttgggca gcgccaggcc ggcggcgagg aagtagacgc
      841 tgagcggcag cagcaccgat gcgaaggtct gcaccccggc ccaggccagc cccgccgcca
      901 ccacgcccga accggcgcac agcagcgtgc ccaggcggat catgcggtcg aggccgaaac
      961 ggtgggtcag ccgcccggcc aggaaggcgc cgacgatgta gccggcgatc accaccgcga
     1021 agcccaggcc gaaatggcgc ggcgtcagcc ccagcacgtc gatcagcacg aagctggacc
     1081 ccgagatgaa ggtgaacatg ccgccgaagg cgcacatcac cgtcaggcca tagcccagca
     1141 ccgcgcggtc acgcagcagc gcgccgtaat tgaccagcat ggccgagggc gacagggcgt
     1201 cgcggtcctt atggccgttg gtctcggcca gcagccgcca cacgccggcg aacagcatca
     1261 cgccgaacag caccagcacc acgaaattcg cgcgccagcc gaacagcgaa tgcagccagc
     1321 cgcccaggat gggcgccgcg aacggcgcca aggccatggc cgaggccatg taggacagca
     1381 cgcgcgccgc ttggtcgcgc gggaagacgt cgcgcaccac ggcgcgaccg accaccgggc
     1441 cgcaacaggc gcccagggcc tggaagaagc ggccggccac caccgcctcg atactggggg
     1501 cgaagacgca gaacaccgac gccagcagat agattaaaac cccgcccagg atcaccggcc
     1561 ggcggccgaa gcggtcggac agcggcccgt aaaccggcat gctgaccgcc atgccgacca
     1621 ggaaggccga cagcgtcaac tgggtggtct cgacgtcggt ggcgaaggcg cgcgccatgt
     1681 cgggcagcga cgcgagatag aggtcggtcg agatcggccc gaacgccacc agcgccgtca
     1741 gcagcacgcg gacggacagg gcggtgggcg gatgggccgg aggagtcgac atcttgggtg
     1801 attagcacat cagccgtagc gatgcagccg ggcaccgtgg gatttcagcc atgcccgggc
     1861 gtgggcatgg tcgggggtca gcgtcgccac caccgcccag aaggccggcg agtggttgag
     1921 ttcggccaga tgcgccactt cgtgcgccac cacgtaggtc aggatgcgct cgggcgccag
     1981 caccagccgc cacgagaacg ccaggtcgcc cttggccgag caactgcccc agcgcgagcg
     2041 ggtgtccttg acgctgatgc ggccgggctt cctgccgatg cggtcggcca gctcgtgggc
     2101 gcgcggcagg atcagccgct tggcctcggc cttgaggaaa tcgccgacgc gacgggcgac
     2161 gaaatcgggc tggcccgaca ccttgatggc gccatcctcc agccacacgc cgcgccgggc
     2221 gccgggttcg tggtggatgg catggccggc gcccagcagc ggcaccaccg cccccggctc
     2281 gaacgccacc cgccccggca accgcgccag cctttccgcc agccagaccc ggttggccag
     2341 cgcgaatttc tcggcctcgc gcaacgacgt ccgctgcggc aacaccatca ccggccccac
     2401 cgccggatcg atgcgcaggg acaggcgccg ggccagggcc gagcgcttca acgcgatggt
     2461 gacggaatgg ccgccgaggt cgagggtgag ggtcgtggac atcaatcgaa tgactggggc
     2521 tgcgcaactc gcctgaaaga tccttcgcct tcggctcagg atgacacgcc tattctgtca
     2581 tgctgagcac agcgaagcat ctttcaggca ccaccgtcac gccgggggat tattcaaaca
     2641 ccgcacccct ccgcctgagg tcatcgatgt cctgcccgtc aaggat
//
LOCUS       DATIKR010000534         1889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_237587, whole genome shotgun sequence.
ACCESSION   DATIKR010000534 DATIKR010000000
VERSION     DATIKR010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237587"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VLL76_08295"
     CDS             complement(<1..532)
                     /locus_tag="VLL76_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSV29545.1"
                     /translation="MTDIVIAAATRTPIGSFNGSLSGYSAAQLGEIVIREVLKRADVA
                     PEDVDEVLLGQILTAGVGMNPARLAAVNAGLPIQSTAMTINQVCGSGLRAVALGMQAI
                     LAGDSKIVVAGGQESMSNSQHAGFLRGGVKMGPMGFVDTMINDGLTDAFNAYHMGVTA
                     ENVAREFQISREMQDEF"
     gene            complement(637..>1889)
                     /locus_tag="VLL76_08300"
     CDS             complement(637..>1889)
                     /locus_tag="VLL76_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29546.1"
                     /translation="RRTTASPLPPRMGPRPLPLHLMSHASMLLASHAALPLWRNGSLA
                     WKPSLAPEAEALRQSLDAAGPDAWRALEAAITAEAADRHQSMLAGIEAYRRHPYRRDL
                     PPPPELWREGSTRLLDYRRPDTPGGLPVLVVPSLINRAYILDLTARRSLVRYLAARGL
                     QPFLLDWDEPGPAEEAFTLTDYVAGRLGAALDRVVEATGRKAALVGYCMGGDLALAAA
                     LLHPAKVCALALLATPWDFHTGRESHGMMMRALAGPLGGVIEQAGGVPVDLLSAMFAS
                     LDPALAARKFAAFARLKAKSARARDFVALEDWANDGVRLAGPVARECLFGWYGGNDPG
                     EGRWRVAGRPIIPEDVRVPTLAVVPARDRIVPPDSALPLARRIAGAKLMMVGGGHVGM
                     LLSARAKTDVYGPLAKWLVRSALQ"
BASE COUNT          291 a          642 c          672 g          284 t
ORIGIN      
        1 cgaactcgtc ctgcatctcg cggctgatct ggaattcgcg ggccacgttc tcggcggtga
       61 cgcccatgtg gtaggcgttg aaggcgtcgg tcaggccgtc gttgatcatg gtgtcgacga
      121 agcccatcgg gcccatcttg acgccgccgc gcaggaagcc ggcgtgctgc gagttggaca
      181 tgctttcctg gccgccggcg acgacgatct tggaatcgcc ggccaggatg gcctgcatgc
      241 ccagcgccac ggcgcgcagg cccgagccgc acacctggtt gatggtcatg gcggtggatt
      301 ggatcggcag gccggcgttg acggcggcca ggcgggcggg gttcatgccg acaccggcgg
      361 tcaggatctg gcccagcagc acctcgtcca cgtcctcggg agcgacgtcg gcgcgcttga
      421 gcacctcgcg gatgacgatc tcacccaact gggcggcgga atagccggac agggagccgt
      481 tgaacgagcc gatcggcgta cgggtggcgg cggcgataac gatatcggtc atgacctatt
      541 gttctccttg atggacgttc ttaccccggt cacggcaatc cgaagcgaat tgaccatgag
      601 tctcatactg cgccggttgg ggcgcgcgca acccgtctat tgcagtgccg aacggactaa
      661 ccatttcgcg agtggtccat agacgtcggt cttggccctt gccgacaaca gcataccaac
      721 gtgtccgcct cccaccatca tcaacttcgc acctgcgata cgccgtgcca gaggcagggc
      781 ggaatccggc ggcacgattc ggtcgcgcgc cggcaccacg gccagggtcg gcacgcgcac
      841 gtcctcgggg atgatcggcc tgccggcgac ccgccagcgg ccctcgccgg ggtcgttgcc
      901 gccataccat ccgaacaggc attcccgggc gacgggtccg gccagccgca cgccgtcatt
      961 ggcccaatcc tcaagtgcga cgaaatccct cgcccgggcg ctcttcgcct tcaggcgggc
     1021 gaaggcggcg aacttgcggg cggccagagc ggggtcgagg ctggcgaaca tggcgctcaa
     1081 caggtccacc ggcacgccgc cggcctgttc gatgacgccg cccagcggcc cggccaacgc
     1141 ccgcatcatc atgccgtgcg attcacggcc ggtgtggaag tcccacggcg tcgccagcag
     1201 cgccagcgcg cacaccttgg cgggatgcag cagcgccgcc gccagggcga ggtcgccacc
     1261 catgcaatag ccgaccagcg ccgccttgcg gccggtggcc tcgaccaccc ggtccagcgc
     1321 cgcgcccagg cggccggcga cgtaatcggt cagggtgaag gcctcctcgg ccgggccggg
     1381 ttcgtcccag tccagcagga agggctgcag cccgcgcgcc gccagataac gcaccaggct
     1441 gcgcctggcg gtcaggtcca ggatgtaggc gcggttgatc aggctgggca ccaccagcac
     1501 cggcagcccg ccgggcgtgt cggggcggcg gtaatccagc aggcgggtgc tgccctcgcg
     1561 ccacaattcg ggcggcggcg gcaggtcgcg gcgatagggg tggcggcgat aggcctcgat
     1621 gccggccagc atggattggt ggcggtcggc ggcctcggcg gtgatggcgg cttcgagtgc
     1681 gcgccaggcg tcaggtccgg cggcgtcgag gctttgcctc agggcttccg cttcgggcgc
     1741 caagctgggc ttccaggcca gcgacccgtt cctccagagc ggcaatgcgg cgtgcgaggc
     1801 cagcagcatc gaggcatggc tcatcaggtg caacggcagc ggccgcggcc ccatgcgggg
     1861 cggaagcggg gatgccgtcg tgcgccgtt
//
LOCUS       DATIKR010000535         3681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_164970, whole genome shotgun sequence.
ACCESSION   DATIKR010000535 DATIKR010000000
VERSION     DATIKR010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164970"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..463)
                     /locus_tag="VLL76_08305"
     CDS             complement(<1..463)
                     /locus_tag="VLL76_08305"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HSV29547.1"
                     /translation="MSDVIKFKGHSYVLATSPRVAMRTLTLKDGDSFAVFDRYGDTGS
                     VGSGEQGVYHRGTRMLTHHELHLGHQRPLLLSSTVHEHNAFVAVDLTNPDIPVGGDRI
                     IPRGSIHVFRSLFLWQGALFCRTRVYNYGDVELTADIAFLFEADFADVFEVR"
     gene            complement(464..1525)
                     /locus_tag="VLL76_08310"
     CDS             complement(464..1525)
                     /locus_tag="VLL76_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013908127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV29548.1"
                     /translation="MRIAQVAPLNEAVPPKLYGGTERVVHYLTEELVAQGHDVTLFAS
                     GDSVTEARLVPCCPKALRLDEECADRVVHHILQLEAVMAEAGGFDVIHFHVDYLHYPF
                     ARRSAVPVVTTLHGRQDLRDLVPLHRMFDDLPVVSISDAQRRPAPGLNWLGTVHHGLP
                     PGMLTRGTGTGGYLAFLGRFSPEKGFERAVEIARRTGLMLKAAAKKENFDQEYFDRVV
                     APLLADPLVEWIGEIGEHDKAAFLGEALAHLFPIDWPEPFGLVMIEAMACGTPTIAWP
                     CGSVSEVVENGISGYIVSSIEDAVAAVEACRRFDRHRCRASFERRFSAARMAADYVML
                     YRRLAAPRRPLKPVVGGLT"
     gene            1766..2644
                     /gene="rpoH"
                     /locus_tag="VLL76_08315"
     CDS             1766..2644
                     /gene="rpoH"
                     /locus_tag="VLL76_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HSV29549.1"
                     /translation="MRSAVPTLPVLDADGGLSKYFRDIRAFPMLEPEEEYMLAKRWVE
                     HEDTAAAHRLVTSHLRLVAKIAMGYRHYGLPMADLISEGNVGLMRAVKKFDPEKGFRL
                     ATYAMWWIKASLNEFVLGSWSLVKIGTLAAQKKLFFNLRRIKAKLQLMEQGDLAPEDV
                     AAIATELKVEKADVVAMNRRMAGRDASLNIPVGEGATEIVDLLPDDADNQEVSYAKHE
                     ELSKGRKLIAAALKTLTDREREVFVERRLRDDPLTLEELGSRYGVSRERIRQIEVKAF
                     QKVQEIVTAGFLPATA"
     gene            2788..>3681
                     /locus_tag="VLL76_08320"
     CDS             2788..>3681
                     /locus_tag="VLL76_08320"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HSV29550.1"
                     /translation="MGTLSIKAKMALSYVGMLLMLLGIGLFGLSKVALLHGHFEEMAR
                     ELLPVVANAGAMNTMSARLRIAESRLLVTHDEAERGRVVDIMNQRRSDLEKLIEKHKG
                     FAADDDDRQRDAELVKQFAAYSKFMDEIVGLITAGRQAEGEQLFNSSSLKTYQALNKM
                     FDAAVAHELETVNADAEDAGAVYGAATAWIWGSIGAGVLVTVLLAWLMARNVAAPLTA
                     MTTAMGRLAEDDLSVAIPGVGRGDEIGAMAAAVAVFKDKMGLNRQLQAEAKQAELRAA
                     EQRKQDMNRLADSFEQSVSGVV"
BASE COUNT          704 a         1153 c         1221 g          603 t
ORIGIN      
        1 cgcgcacctc gaacacatcg gcgaaatcgg cctcgaacag gaaggcgatg tcggcggtca
       61 gctcgacgtc gccataattg tagacccgcg tgcggcagaa cagcgcgccc tgccacagga
      121 acagcgagcg gaacacgtga atcgagccgc gcgggatgat gcggtcgccg cccaccggga
      181 tgtcgggatt ggtcaggtca acggcgacga aagcattgtg ttcgtgcacg gtcgaggaca
      241 gcagaagcgg acgctggtgg cccagatgca gctcgtgatg ggtcagcatg cgggtacctc
      301 ggtggtagac gccctgctcg cccgacccca ccgagccggt gtcgccatag cggtcgaaca
      361 cagcaaagct gtcgccgtcc ttcagcgtca gcgtgcgcat ggcgacgcgc gggctggtgg
      421 ccagcacata ggaatggccc ttgaacttga tgacgtcgct cattcaggtc agccctccca
      481 cgacgggctt gagcgggcgc ctgggtgcgg ccaggcggcg atagagcatc acgtagtcgg
      541 cggccatgcg ggccgcgctg aagcggcgct cgaacgaggc gcggcaacgg tggcggtcga
      601 agcgtcgaca ggcctcgacg gcggcaaccg cgtcctcgat cgaggaaacg atgtaacccg
      661 agattccgtt ctccacgacc tcggagacgc taccgcacgg ccaggcaatg gtgggggtgc
      721 cgcaggccat ggcctcgatc atcaccaagc cgaagggttc gggccagtca atggggaaca
      781 aatgggccag cgcctcgccc aggaaggcgg ccttgtcgtg ctcgccgatt tcgccgatcc
      841 actcgaccag cggatcggcc agcagcggcg cgaccacacg atcgaaatac tcctggtcaa
      901 aattctcttt cttggcagcg gccttcagca tcaggccggt tcgccgcgcg atctcgacgg
      961 cgcgttcgaa ccccttttcc ggcgagaagc ggcccaggaa ggcgaggtag cccccggtgc
     1021 ctgtgccgcg cgtcagcata cccggtggca aaccatgatg aaccgtaccc agccagttga
     1081 ggcccggtgc cggtcggcgc tgtgcatccg agatggacac caccggaagg tcatcgaaca
     1141 tgcgatgcaa gggcacaagg tcgcgaagat cctggcgacc gtgcagggtc gtgaccaccg
     1201 gcaccgcgct gcgccgggcg aagggataat gcaggtaatc cacatggaaa tggatgacgt
     1261 cgaagccgcc ggcctcggcc atcaccgcct caagttgcag gatatggtgg accacccggt
     1321 cggcgcattc ctcgtccagc cgcaatgcct tgggacaaca cggcaccagc cgcgcctcgg
     1381 tcacggaatc gccgctggcg aacaacgtga cgtcatggcc ctgggccacc aattcctcgg
     1441 tcaggtaatg aacgacccgt tcggtgccgc cgtacagctt gggtgggacc gcttcgttca
     1501 acggggccac ttgggctatc cgcatggctg gacctttcct tcgctttcgc cggaaaggaa
     1561 ggtggggatg ctccgctagg gggggcaatt ggccttcgga ggcacggaac ccgcgccggg
     1621 ctgcccgtgt acggtgccgc ttgacctgcg ccctccggct ttggataata ttggttgaag
     1681 gaacgcgctt cctcgaaggc gttccgcctg atggcccgac cccaagggtg ggccttggtc
     1741 atgttgctcg tgggaggata tgacgatgcg tagcgccgtg ccgaccctgc ccgtcctgga
     1801 tgcggatggc ggcctttcca agtatttccg cgatatccgc gccttcccga tgctcgagcc
     1861 cgaggaagag tacatgctcg ccaagcgctg ggtcgagcat gaggacaccg cggccgccca
     1921 tcgcctggtc accagtcacc tgcgcctggt cgccaagatc gcgatgggct atcgccatta
     1981 cgggttgccc atggccgacc tgatctcgga gggcaatgtc ggcctgatgc gggcggtcaa
     2041 gaagttcgac ccggaaaagg gcttccgcct cgccacctac gccatgtggt ggatcaaggc
     2101 cagcctcaac gaattcgtcc tgggctcgtg gtcgctggtc aagatcggca ccctggcggc
     2161 ccagaagaag ctgttcttca acctgcgccg catcaaagcc aagctgcagt tgatggaaca
     2221 gggcgacctg gcgcccgagg acgtcgccgc catcgccacc gaactgaagg tggaaaaggc
     2281 cgacgtggtg gcgatgaacc gccgcatggc cggccgcgac gcctcgctca acatcccggt
     2341 cggcgaaggc gccaccgaga tcgtcgacct gctgcccgac gatgccgaca accaggaagt
     2401 cagctatgcc aagcacgagg aattgtccaa gggccgcaag ctgatcgccg ccgcgctcaa
     2461 gaccctgacc gaccgcgaac gcgaagtgtt cgtcgaacgc cgcctgcgcg acgacccgct
     2521 cacgctggag gaactgggca gccgctacgg cgtcagccgc gagcgcatcc gccagatcga
     2581 ggtcaaggcc ttccagaagg tccaggaaat cgtcaccgcc ggcttcctgc cggcgaccgc
     2641 ctgaaaaaag ctgatggttg cggcgccggg ggttttgatc ccctggcaag ctgcatactt
     2701 ttgcagtaga gccatgcggg ttttgatcga ctgaacgtta cctctgccct taagatcgcc
     2761 cggaaggtgg gaatgggaag gggtcaaatg ggaacgttgt ccatcaaggc caagatggcg
     2821 ctcagctatg tgggcatgtt gctgatgctg ttgggcatcg gcctgttcgg cctgtccaag
     2881 gtcgcactgc tgcacggcca tttcgaggaa atggcgcgtg agttgctgcc ggtcgtcgcc
     2941 aatgccggtg ccatgaacac catgtcggct cgcctgcgca tcgccgaatc gcggttgctg
     3001 gtcacccacg acgaggccga gcgcggccgc gtcgtggaca tcatgaacca gcgccgttcc
     3061 gatctggaaa agctgatcga gaagcacaag ggcttcgcgg ccgacgacga cgaccgccag
     3121 cgcgacgccg aactggtcaa gcaattcgcc gcctattcca aatttatgga tgagatcgtc
     3181 ggcctgatca cggccggcag gcaggccgag ggcgagcaac tgttcaacag ttccagcctg
     3241 aagacctacc aggcgctcaa caagatgttc gacgccgccg ttgcccacga gttggaaacg
     3301 gtgaacgccg atgccgagga cgccggtgcc gtctatggcg ccgcgaccgc ctggatatgg
     3361 gggtcgatcg gcgccggcgt gctggtgacg gtgctgttgg cctggctgat ggcgcgcaac
     3421 gtcgcggcgc cgctgacggc catgaccacg gccatggggc ggttggccga agatgacctg
     3481 tcggtggcga ttccgggcgt cgggcgcggt gacgagattg gcgccatggc ggcggcggtg
     3541 gccgtattca aggacaagat gggcctgaac cgccaattgc aggccgaggc caagcaggcc
     3601 gaactgcgtg ccgccgaaca gcgcaagcag gacatgaacc gcctggccga cagcttcgaa
     3661 caatcggtca gcggcgtggt g
//
LOCUS       DATIKR010000536         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_31608, whole genome shotgun sequence.
ACCESSION   DATIKR010000536 DATIKR010000000
VERSION     DATIKR010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31608"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..628
                     /locus_tag="VLL76_08325"
     CDS             <1..628
                     /locus_tag="VLL76_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005959004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV29551.1"
                     /translation="MAIALLRHVPKGNAEARAGEWRQLMGRHLSERSVGIIGCGHIGQ
                     DLAPLLKAFGCRVLAHDIRDFSDFYAAHGVEKVGLDELLKTAEVVTLHLPLDAGTRNI
                     LSAERLALMRPDAVLINCARGGLIDEGALKAMLADGRLAGAGLDVMNTEPPEDLDLIR
                     MPNVLVTPHIGGSAEEAVLAMGRAAIRGLTENAVPEPGSEVWRAAGMG"
     gene            complement(643..>2106)
                     /locus_tag="VLL76_08330"
     CDS             complement(643..>2106)
                     /locus_tag="VLL76_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSV29552.1"
                     /translation="KDQILTLYLNRVYLGSGTFGVDAAAKRYFDVSARKLSLYQGAVI
                     AGLLKAPSRYSPLNDSEASHKRTVEVLGNMVEAGYIDSKAAEMAAMTGAAQATRRQVP
                     GGRWFADWLMGQLADMAEAQGKDIVVHTTLDMGLQRKAEAELKQMIRSQGDKNKVAQG
                     AIVVLSPDGAVRALVGGADYDESQFNRATQAQRQPGSSFKPFVYLAAMERGFQPNDVF
                     DDAPIKLGNWSPGNYNGKFEGPVNLHHAFAHSTNTVAVRLIEEVGPARVGALAHRMGI
                     ASKMGNDASLALGTSEVNLLELTTAYAPFANGGNGVPAYGIEKITDPEGRAVLYQRQG
                     GGFGQVVSNQALASMHEMMAAVLTEGTGKAARLDRPAAGKTGTTQDYRDAWFMGFTAD
                     YVAGVWLGNDDQRHEMKKVTGGGLPAQLWKSVMLAAHRGLPPRALPTPQPEYVPGNDG
                     TEGTAGSWPQAQSQGGGDPVRAIGDAVDSLLNSLFGR"
BASE COUNT          297 a          713 c          748 g          348 t
ORIGIN      
        1 catggccatc gccctgctgc gccacgtgcc caagggcaat gccgaggccc gcgccggcga
       61 atggcggcag ttgatgggcc gccatttgtc ggaacgcagc gtcggcatca tcggatgcgg
      121 ccatatcggc caggacctgg cgccgctgct caaggcgttc ggctgccgcg tgctggcgca
      181 cgacatccgc gacttctccg atttctacgc cgcccatggg gtcgagaagg tggggctgga
      241 cgagctgttg aagaccgccg aggtggtcac cctgcacctg ccgctggatg ccggtacccg
      301 caacatcctg tcggccgagc ggctggcgct gatgcgcccc gacgcggtgc tgatcaattg
      361 cgcccgtggc ggcctgatcg acgagggtgc gctcaaggcc atgctggccg acggccgcct
      421 ggccggcgcc gggttggacg tgatgaacac cgaaccgccc gaggatctgg acctgatccg
      481 catgcccaac gttctcgtca ccccgcatat cggcggcagc gccgaggaag cggtgctggc
      541 catgggccgc gccgccatcc ggggcctgac cgagaacgcg gtgcccgagc cggggtcaga
      601 ggtgtggcgg gcggccggaa tgggctgacc gccctccttc ccctaacgcc cgaacaggct
      661 gttcagcaac gaatccaccg cgtcgccgat ggcccgcacc gggtcgccac cgccctggct
      721 ctgggcctgc ggccacgatc cggcggtgcc ctcggtgccg tcgttgccgg ggacatattc
      781 cggctgcggc gtcggcaggg cgcgcggcgg caggccgcga tgggcggcca gcatgacgct
      841 tttccacaat tgcgccggca ggccgccgcc ggtgaccttc ttcatctcgt ggcgctggtc
      901 gtcgttgccc agccacacgc cggcgacgta atcggcggtg aagcccatga accatgcgtc
      961 gcggtaatcc tgggtggtgc cggtcttgcc ggcggccggg cggtcgaggc gcgccgcctt
     1021 gccggtgccc tcggtcagca cggcggccat catctcgtgc atgctggcca aagcctggtt
     1081 cgacaccacc tggccgaagc cgccgccctg gcgctggtac agcacggcgc ggccctcggg
     1141 atcggtgatc ttctcgatgc cataggcggg cacgccgttg ccgccgttgg cgaagggggc
     1201 ataggcggtg gtcagctcca gcaggttgac ctccgaggtg cccaaggcca gcgacgcgtc
     1261 gttgcccatc ttcgaggcga tgcccatgcg atgggccagc gcgccgacgc gggcggggcc
     1321 gacttcctcg atcaggcgga cggcgacggt gttggtggaa tgggcgaagg cgtggtgcag
     1381 gttgaccggc ccctcgaact tgccgttgta attgcccgga ctccaattgc ccagcttgat
     1441 gggggcgtcg tcgaacacgt cgttgggctg gaagccgcgc tccatggcgg cgagataaac
     1501 gaacggcttg aacgacgatc ccggctggcg ttgcgcctgg gtggcgcggt tgaactggct
     1561 ctcgtcgtaa tcggcgccgc ccaccagggc gcgcacggcg ccatcggggc tcagcaccac
     1621 gatggcgccc tgggccacct tgttcttgtc gccctgggac cggatcatct gcttcagctc
     1681 ggcctcggcc ttgcgctgca gccccatgtc gagcgtggtg tggacgacga tgtccttgcc
     1741 ctgggcctcg gccatgtcgg ccagttggcc catcagccag tcggcgaacc agcggccgcc
     1801 cggcacctgg cggcgggtgg cctgggcggc gccggtcatg gccgccatct cggccgcctt
     1861 ggaatcgatg tagccggcct cgaccatgtt gcccagcacc tcgacggtgc gcttgtggct
     1921 ggcctcggaa tcgttgagcg gcgaatagcg gctgggcgcc ttgagcaggc cggcgatgac
     1981 ggcgccctgg tacagcgaca gcttgcgcgc cgagacgtcg aaatagcgct tggcggcggc
     2041 gtccacgccg aaggtacccg accccaaata gacgcggttg aggtacagcg tcaggatctg
     2101 gtcctt
//
LOCUS       DATIKR010000537         1835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_201374, whole genome shotgun sequence.
ACCESSION   DATIKR010000537 DATIKR010000000
VERSION     DATIKR010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201374"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1784
                     /locus_tag="VLL76_08335"
     CDS             99..1784
                     /locus_tag="VLL76_08335"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29553.1"
                     /translation="MFASRLPIASKILSIVALLGMVVVAIGSAGWFAAQVLDEEIQSV
                     AASGKAEVLAARMNTNIQAMNALQFQLVADPSAKAREQVAKALGRERELFTSRMASAG
                     AVLGDTGAGLDRIAQLDKGFAGYVAALDKVQVAAATGDQAALTAASSEAAKLAADLRE
                     VARAFFKGAEDHSAALLAQADDNAHQAQIFVLAIAVVGMALGLGFAWGVARWGITKPL
                     NESVAALGGLAEGRLDTEITGTERGDEIGQVARAMAVFKQRLVHERELAAEAEIHRKA
                     ELARAEKVTSLTRAFEDEVRSVLTTVGGEVERLEATSAAMTEAARTASERAQAAAAAA
                     LQASSNVATVASAAEELSSSITEIGRQVSQANTVSHQATDEAGHTNELVRQLAEAAAR
                     IGDVVGTITAIAHQTNMLALNATIEAARAGELGRGFAVVAGEVKGLATQTADATHDVS
                     TQVGAVRDGVHEAVAAITHIAATISQVGEASAGIASAVEQQAAATAEIARNVEQAAAG
                     TGEVSANMAAVEQAATATGEAAMAVKDVAHGVAEDAQKLRIMVEGFLTGMRAA"
BASE COUNT          300 a          629 c          658 g          248 t
ORIGIN      
        1 gcccgccgcg cccggccttt catataaaac gctgtttgcc gttcgccttc gggttataat
       61 agggcattgt ccttggacgc ccatgaagga ggcgtgccat gtttgcgagc cgtctgccca
      121 tcgcatcgaa aatcctgtcc atcgtcgctc tgctgggcat ggtggtggtc gccatcggct
      181 cggccggttg gttcgcggcc caagtgctgg acgaagaaat ccagtcggtc gccgcctcgg
      241 gcaaggccga ggtattggcc gcgcgcatga acaccaacat ccaggccatg aacgcgctgc
      301 aattccagtt ggtcgccgat ccctccgcca aggcgcgcga gcaggtggcc aaggccctgg
      361 ggcgcgagcg cgagttgttc accagccgca tggcatcggc cggtgcggtg ctcggcgaca
      421 cgggcgccgg gctggaccgc atcgcccaat tggacaaggg cttcgccggc tatgtcgccg
      481 ccctcgacaa ggtccaggtc gctgcggcga ccggcgacca ggcggcgctg accgccgcca
      541 gcagcgaggc cgccaagctg gccgccgacc tgcgcgaggt ggcgcgcgcc ttcttcaagg
      601 gggccgagga tcactcggcg gcgctgctgg cgcaggccga cgataacgcc catcaggcgc
      661 agatcttcgt cctcgccatc gccgtcgtcg gcatggctct gggcctgggg tttgcctggg
      721 gcgtggcgcg ctgggggatc accaagccgc tgaacgagag cgtggccgcg ctgggcgggc
      781 tggccgaggg gcggctggac accgagatca cggggaccga gaggggcgat gaaatcggcc
      841 aggtcgcccg tgccatggcg gtgttcaaac agcgcctggt gcacgagcgc gagcttgccg
      901 ccgaggccga aattcatcgc aaggccgaac ttgcccgcgc cgaaaaggtc accagcctga
      961 cccgcgcatt cgaggatgag gtgcggtcgg tgctgaccac cgtcggcggc gaggtcgagc
     1021 ggttggaggc gacgtcggcg gcgatgacgg aagccgcccg cacggccagc gagcgggcgc
     1081 aggccgccgc cgccgccgcg ctgcaggcgt cgagcaacgt ggcgaccgtc gcatcggccg
     1141 ccgaggaatt gtccagttcg atcaccgaga tcggccggca ggtcagtcag gccaacaccg
     1201 tgtcgcacca agccaccgac gaggccgggc ataccaacga gctggtgcgc caattggccg
     1261 aggccgccgc gcgcatcggc gatgtggtcg gcaccatcac cgccatcgcc caccagacca
     1321 acatgctggc gctcaacgcc accatcgagg cggcgcgggc cggagaactg gggcgcggct
     1381 tcgcggtggt ggccggcgag gtcaaggggc tggcgaccca gaccgccgac gccacccacg
     1441 acgtctccac ccaggtcggc gcggtgcgcg acggcgtcca cgaggcggtc gccgccatca
     1501 cccacatcgc cgccaccatt tcgcaggtgg gcgaggcgtc ggcgggcatc gcctccgccg
     1561 tcgagcagca ggccgccgcc accgccgaaa tcgcccgcaa cgtcgaacag gcggcggcgg
     1621 gaaccggcga ggtctcggcc aacatggcgg cggtcgaaca ggccgccacc gccaccggcg
     1681 aagccgccat ggcggtcaag gacgtcgctc acggcgtcgc cgaggacgcc cagaagctgc
     1741 ggattatggt ggaaggcttc ctgaccggga tgcgcgcggc ttaaaccgtc agcaccacct
     1801 tgccggtggc ggcgcggcct cggatcaggt cgagg
//
LOCUS       DATIKR010000538         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_7894, whole genome shotgun sequence.
ACCESSION   DATIKR010000538 DATIKR010000000
VERSION     DATIKR010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7894"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VLL76_08340"
     CDS             <1..882
                     /locus_tag="VLL76_08340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29554.1"
                     /translation="LLKGIATSPAQPIDQRLAAAERAEAMGLMDAELVRKLYGEIEFS
                     VEEMSGVMARADAGPRVRALLYRVAWNMADQGVKGQIVAKALDLAAAKGELASTARIF
                     APLLGDIRPSPEQAGIAAVAAKAQYAIGRGEAADKWLDIARAGPDAQAAARLWPYAAI
                     HAAGGQQPIALPSYAGWRATQDNVPPELRARRAALVLGVLSGLGADVPDAAWLDAVEV
                     PAGGTKPGLFALMQGGALDARIGITVLAALAAIGDTPLAKADPLTLSEAISALSVVGL
                     TEDARALAVEILLANGV"
     gene            893..>1547
                     /locus_tag="VLL76_08345"
     CDS             893..>1547
                     /locus_tag="VLL76_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSV29555.1"
                     /translation="MSRHVETFLEMMGVERGASPNTLDAYRRDLADLAAFLRGAEIVK
                     ADAAQLSAYVRNLADAGMAPRTQARRLSCLRQFYGFAYAEGWRGDDPTSRLDSPRLGR
                     PLPKVLSEVEVDAMLAAVRGLPEPQGPMMTALLELLYGTGLRVSELVGLPLAAVARDP
                     AVLVVRGKGSKERMVPLSDPARDALKAWKAVRDGLLGKKPSRWLFPSHGRTGHLTRAG
                     "
BASE COUNT          191 a          579 c          560 g          217 t
ORIGIN      
        1 ctgctcaagg gcatcgccac ctcgccggcc cagcccatcg accagcgtct ggccgccgcc
       61 gagcgggccg aggccatggg gctgatggat gccgagctgg tgcgcaagct ctatggcgag
      121 atcgagttct cggtcgagga gatgtcgggc gtcatggccc gcgccgatgc cggcccgcgc
      181 gtgcgcgcgc tgctgtaccg ggtggcgtgg aacatggccg accagggcgt caagggccag
      241 atcgtcgcca aggcattgga cctcgccgcc gccaagggcg agctggcgtc caccgcccgc
      301 atcttcgcgc cgctgctggg cgacatccgg ccgagtccgg agcaggccgg aattgccgcc
      361 gtcgccgcca aggcgcaata cgccattggc cgcggcgagg ccgccgacaa gtggctggac
      421 atcgcccgcg ccggccccga tgcccaggcc gccgcccgcc tgtggcccta tgccgccatc
      481 cacgccgccg gcggccagca gcccatcgcg ctgccgtcct atgccggctg gcgcgccacc
      541 caggacaacg tcccgcccga gctgcgcgcc cgccgcgccg ctttggtgct gggcgtgctg
      601 tccggactgg gcgccgacgt ccccgacgcc gcctggctcg acgccgtcga ggtgccggcc
      661 ggcggcacca agcccggcct gttcgcgctg atgcagggcg gcgcgctgga tgcccgcatc
      721 ggcatcaccg tgctggcggc cctggccgcc atcggcgaca cgccgctggc caaggccgac
      781 ccgctgaccc tgtccgaggc catcagcgcc ctgtcggtgg tcggcctgac cgaggacgcc
      841 cgcgccttgg cggtcgagat cctgctggcg aacggggttt gaggcggggc cgatgtcccg
      901 ccacgtcgag accttcctgg agatgatggg cgtcgagcgc ggggcatcgc ccaacacgct
      961 cgacgcctat cgccgcgacc tcgccgacct cgccgccttc ctgcgcgggg ctgaaatcgt
     1021 caaagccgac gcggcgcaat tgagtgccta tgtccgcaac ctggccgatg ccggcatggc
     1081 gccgcgcacc caggcgcggc ggctgtcgtg cctgcggcaa ttctacggct tcgcctatgc
     1141 cgagggctgg cgcggcgacg accccacctc gcgcctcgat tccccccgcc tgggccggcc
     1201 gctgcccaag gtgctgtccg aggtcgaggt tgacgccatg ctggccgccg tgcgcggcct
     1261 gcccgagccc caggggccga tgatgacggc gctgctggag ctgctgtacg gcaccggttt
     1321 gcgggtgtcg gaattggtgg ggctgccgtt ggcggcggtg gcgcgcgacc ccgccgtgct
     1381 ggtggtgcgc ggcaaggggt ccaaggagcg catggtgccg ctgtccgacc ccgcccgcga
     1441 cgccctgaag gcatggaagg cggtgcgcga cgggctgctg ggcaagaagc cgtcgcgctg
     1501 gctgttccct tcccacggcc gcaccggcca cctgacgcgg gccggct
//
LOCUS       DATIKR010000539         1695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_141475, whole genome shotgun sequence.
ACCESSION   DATIKR010000539 DATIKR010000000
VERSION     DATIKR010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141475"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..675)
                     /locus_tag="VLL76_08350"
     CDS             complement(<1..675)
                     /locus_tag="VLL76_08350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29556.1"
                     /translation="MSLRSIAHALFRHRRAMLAVMLVALTLGGFAAALHQPAWRAEAT
                     LLAESRRLDAARSLAALFESRDLHASVLRRLGDALYPALPEADRPAAFAGDLMVEPAD
                     GTALVRVAFDGPDPELAAQALAGLMDGVRARNASVFSVASGEAAVRDAKAAQDSLAAF
                     RKRNNLFDPAAERDALLRRRAELEGQAVAAESEAAALADKLALLKTRLQTTPATISLQ
                     TESERTR"
     gene            complement(689..>1695)
                     /locus_tag="VLL76_08355"
     CDS             complement(689..>1695)
                     /locus_tag="VLL76_08355"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR03023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HSV29557.1"
                     /translation="VMLRLARWTMVARRVLVVGDRDRALEVLSLLAGDTRRWAFPVGI
                     CLDRDPPPQPAMGGFINGLDEVERMVREQAVDDVVVALPWADSHRLSRCLDALRPLTV
                     DVHLFPEAADPFLMGHANSLLAGVPMARVGARPLSGARALAKALEDRVLGGLLLLALA
                     PLMLVIALAIKLDSRGPVLFRQQRYGYDNKPFTCFKFRSMVPRPEEADVRQATRDDPR
                     VTRVGRFLRRTSLDELPQLLNVVLGSMSLVGPRPHAVSHHHYYARLVDDYRCRHRMKP
                     GITGWAQINGCRGETSTVDLMRKRVVHDLWYIDHWSVWLDLVILARTPLACLKGTNAY
                     "
BASE COUNT          261 a          600 c          622 g          212 t
ORIGIN      
        1 gcgggtgcgc tcgctttcgg tctgcagcga gatggtggcc ggcgtggttt gcagccgcgt
       61 cttgagcagc gccagcttgt cggccagcgc cgccgcctcg gattcggcgg ccaccgcctg
      121 gccttccagc tcggcgcggc gcctgagcag ggcgtcgcgc tcggccgccg ggtcgaacag
      181 gttgttgcgc ttgcggaagg cggccaggct gtcctgcgcc gccttggcgt cacgcacagc
      241 cgcctcgccc gacgccaccg agaacacgct ggcattgcgc gcccgcaccc cgtccatcag
      301 cccggccagg gcttgcgccg ccaactcggg atcggggccg tcgaacgcca cccgcaccag
      361 ggcggtgccg tcggccggct cgaccattag gtcgccggcg aaggcggcgg ggcggtcggc
      421 ctcgggcagg gcgggataga gcgcgtcgcc cagccgccgc agcaccgagg cgtgcaggtc
      481 gcggctttcg aacagcgccg ccagcgagcg ggcagcatcg agccggcgcg actcggccag
      541 cagggtggcc tcggcccgcc aggccggctg gtgcagcgcg gccgcgaagc cgcccagggt
      601 cagggcgacc agcatcacgg ccagcatggc gcggcggtgg cggaacaggg cgtgggcgat
      661 ggaccgcagg ctcaagccac atcctccgtc aataggcgtt ggtacccttg aggcaggcca
      721 gcggcgtccg ggccaggatc accagatcca gccagacgct ccaatggtcg atgtaccaaa
      781 ggtcgtggac cacccgcttg cgcatcaggt ccaccgtcga ggtctcgccc cggcagccgt
      841 tgatctgggc ccagccggtg atgccgggct tcatgcggtg gcggcagcgg taatcgtcca
      901 ccagccgggc gtagtaatgg tggtgcgaca cggcgtgcgg ccgggggccg accagcgaca
      961 tcgaccccaa caccacgttc agcaattgcg gcagctcatc gagcgaggtg cggcgcagga
     1021 agcggccgac gcgggtgacg cgcgggtcgt cgcgggtggc ttggcgcacg tcggcctctt
     1081 ccggccgcgg caccatggag cggaacttga agcaggtgaa tggcttgttg tcgtagccgt
     1141 agcgctgctg gcggaacaac accggccccc ggctgtccag cttgatggcg agcgcgatga
     1201 ccagcatcag cggcgccagc gccagcagca gcaggccgcc cagcacgcgg tcttccagcg
     1261 ccttcgccag tgcgcgggca cccgacagcg gtcgggcgcc gacgcgggcc atgggcaccc
     1321 ctgccagcag ggaattggca tgccccatca ggaagggatc ggcggcctcg gggaacagat
     1381 ggacgtccac cgtcagcggc cgcaaggcgt cgaggcagcg cgacaggcga tgggagtcag
     1441 cccagggcag cgccaccacc acgtcgtcca ccgcctgttc gcggaccatg cgctcgacct
     1501 cgtcgaggcc gttgatgaag ccgcccatgg ccggctgtgg cggcgggtcg cgatcgaggc
     1561 agatgccgac cgggaaggcc cagcgacggg tgtcgccggc cagcagcgac agcacctcga
     1621 gcgcgcggtc gcggtcgccg accaccaaca cccgccgggc gaccatggtc cagcgcgcca
     1681 gccgcagcat cacca
//
LOCUS       DATIKR010000540         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_237689, whole genome shotgun sequence.
ACCESSION   DATIKR010000540 DATIKR010000000
VERSION     DATIKR010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237689"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1721
                     /locus_tag="VLL76_08360"
     CDS             <1..>1721
                     /locus_tag="VLL76_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HSV29558.1"
                     /translation="VGLSDEFVSKYFHGTASRIGGIGLAQVAEESVRRHKLAYSDAPV
                     YRNALDVGGEYALRLRGEEHAWTSETIQTMQHAVRTNSYETFKQFSQQIDEQSKRLLT
                     LRGLFEIKPAGNGIPLDEVEPAKEIVKRFATGAMSFGSISWEAHTTLAIAMNRIGGKS
                     NTGEGGELSERFKPMANGDSMRSAIKQVASGRFGVTTEYLVNADDIQIKMAQGAKPGE
                     GGQLPGHKVDENIAKVRHSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNVNPVARISV
                     KLVSEVGVGTVAAGVAKAKADHVVISGFDGGTGASPLTSIKHAGSPWEIGLAETHQTL
                     VLNQLRNRVPVQVDGALRTGRDVVIGALLGADEFGFATAPLIAAGCIMMRKCHLNTCP
                     VGVATQDPELRARFQGQPEHVINYFFFIAEEVREWMAKLGFRKLEDMIGRSDLLDTNK
                     AIEHWKANGLDFSRLFHKVDSKGAPVRHTSGQDHELDAVLDRELIAAARTAIDSKTPV
                     RIEKPVCNVNRSVGAMLSGEVAKAHGHAGLAPDTISIKLNGTAGQSFGAFLARGVSLE
                     LEGEGND"
BASE COUNT          306 a          613 c          547 g          255 t
ORIGIN      
        1 gtcggcctgt cggacgagtt cgtctccaag tacttccacg gtaccgccag ccgcatcggc
       61 ggcatcggcc tggcccaggt ggccgaggaa tcggtgcgcc gccacaagct ggcctattcc
      121 gacgcgccgg tgtaccgcaa cgccctggac gtgggtggcg agtacgcgct gcgcctgcgc
      181 ggcgaggagc atgcctggac ctcggaaacg atccagacca tgcagcacgc cgtgcgcacc
      241 aactcctatg agaccttcaa gcagttctcg cagcagatcg acgagcagtc caagcgcctg
      301 ctgaccctgc gcggcctgtt cgagatcaag ccggccggca acggcattcc gctcgacgag
      361 gtcgagccgg ctaaggagat cgtcaagcgc ttcgccaccg gcgccatgtc gttcggttcg
      421 atctcgtggg aagcccacac caccctggcc atcgccatga accggatcgg cggcaagtcg
      481 aacacgggcg agggcggcga gctgtcggaa cgcttcaagc ccatggccaa cggcgattcc
      541 atgcgctcgg ccatcaagca ggtggcctcg ggccgcttcg gcgtcaccac cgaatacctg
      601 gtcaacgccg acgacatcca gatcaagatg gcccagggcg ccaagcccgg cgagggcgga
      661 cagctgcccg gccacaaggt cgacgagaac atcgccaagg tgcgtcattc gaccccgggc
      721 gtcggcctga tcagcccgcc gccgcaccat gacatctatt cgatcgaaga tctggcccag
      781 ctgatctacg acctgaagaa cgtcaacccg gttgcccgca tctcggtgaa gctggtgtcc
      841 gaggtcggcg tcggcaccgt cgccgccggc gtcgccaagg ccaaggccga ccacgtggtg
      901 atctcgggct tcgacggcgg caccggcgcc tcgccgctga cctcgatcaa gcacgccggt
      961 agcccgtggg aaatcggcct ggccgagacc caccagaccc tggtgctgaa ccagttgcgc
     1021 aaccgcgtgc cggttcaggt ggacggcgcg ctgcgcaccg gccgcgacgt cgtcatcggc
     1081 gcgctgctgg gcgccgacga gttcggcttc gccaccgcgc cgctgatcgc ggcgggctgc
     1141 atcatgatgc gcaagtgcca tctgaacacc tgcccggtgg gcgtcgccac ccaggacccc
     1201 gagctgcgcg cccgcttcca gggccagccc gagcacgtca tcaactactt cttcttcatc
     1261 gccgaggaag tgcgcgagtg gatggccaag ctgggcttcc gcaagctcga ggacatgatc
     1321 ggccgctccg acctgctcga caccaacaag gccatcgagc attggaaggc caacggcctc
     1381 gatttctcgc gcctgttcca caaggtggac tcgaagggcg ccccggtgcg tcacacctcg
     1441 ggccaggacc acgagctcga cgccgtgctc gaccgcgagc tgatcgccgc cgcccgcacc
     1501 gccatcgaca gcaagactcc ggtccgcatc gagaagccgg tgtgcaacgt caaccgttcg
     1561 gtcggcgcca tgctgtcggg cgaggtcgcc aaggcccacg gccatgccgg cctggccccc
     1621 gacaccatct cgatcaagct gaacggcacc gccggccagt ccttcggcgc gttcctggct
     1681 cgcggcgtgt cgctggagct ggaaggcgag ggcaacgatt a
//
LOCUS       DATIKR010000541         1916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_56047, whole genome shotgun sequence.
ACCESSION   DATIKR010000541 DATIKR010000000
VERSION     DATIKR010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56047"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1916
                     /locus_tag="VLL76_08365"
     CDS             <1..>1916
                     /locus_tag="VLL76_08365"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSV29559.1"
                     /translation="VASVWEDYTGRGVTIANIEGQVDYRHPDLAANYDTTLDWDFVEN
                     DSDSYVRLPTSDGHSTATSGFMVADDNGSGLVGVAYDSKLFIPAVGANGSSYSHLYDE
                     AINYSWQKGADVANFIGIYLAQSGVPSNIDANAIKASLANAATYGRGGLGMAVAITGG
                     NEYYQGYDTGYWTPTSTRHTASIAALDTYGAPTGWTTPGAGILVATPGERALTLDVSG
                     PYGYSAEDVKVFSGTCGATPLATGVMALMLDANPGLGYRDVYEILAYSARRTEGDPLQ
                     WSTNAAGNWNGGGLHVSHRVGYGLIDAHAAVRMAETWERQSTAANEVTLTAASAPRKA
                     IPDNGVLTDSVVVADSVEIDRVEVELNISHPWVGDLKVTLVGPDGTESVLVNRPGKNP
                     DDPGATGAGSSNFVYTVGSTHHYGEASGGTWTLRVEDQHGGHVGTLNSWKLNLYGDAA
                     TADDVFVFTNEYIDMGGDANAARRVLSDEGGSDTLNASAVSYDTYLDLSGTAASTIAK
                     NDLSIAQGTVIEKAYTGDGADVVIGNAADNMLSGGRGADTLYGGAGSDRLLGGKGDDL
                     LNGGAGADVLDGGEGFDTVSYLGASQGVAVDLGAARGTGGEAAGDSLVGIEAVEGSAF
                     ADTLAGGAGGDVLE"
BASE COUNT          324 a          676 c          647 g          269 t
ORIGIN      
        1 acgtcgcctc ggtgtgggag gactacaccg ggcgcggcgt cacgatcgcg aatatcgagg
       61 gccaggtcga ttaccgtcat ccggaccttg ccgccaacta cgacaccacg ctggactggg
      121 atttcgtcga gaacgactcc gattcctacg tccggctgcc cacctctgac ggccactcga
      181 cggccacgtc cggcttcatg gtggccgacg acaacggctc gggtctggtg ggcgtcgcct
      241 acgattcaaa gctcttcatc ccggcggtcg gcgccaacgg cagttcgtat tcgcacctct
      301 atgacgaggc gatcaactac tcctggcaga agggggccga cgtcgccaat ttcatcggca
      361 tctaccttgc ccagagcggc gtgccgtcga atatcgacgc caacgccatc aaggcgtcgc
      421 tggccaacgc ggccacctat ggacgcggcg gcttgggcat ggcggtcgcc atcaccggcg
      481 gcaacgagta ttaccagggc tacgataccg gctattggac gccgacctcg acgcggcaca
      541 ccgcctcgat cgccgcgctt gacacctacg gcgcgccgac cggttggacc actcccggcg
      601 ccggcatcct ggtcgcgacc ccgggcgagc gcgcgctgac gctcgacgtg tccggcccct
      661 acggctacag cgccgaggac gtcaaggtgt tcagcggcac ctgcggcgcc acgccgctcg
      721 ccaccggcgt gatggcgctg atgctggacg ccaatcctgg tctcggttac cgcgacgtct
      781 acgagattct ggcctattcc gcccgccgca ccgagggtga tccgctgcag tggagcacca
      841 acgccgcggg caattggaac ggcggcggcc tgcatgtcag ccaccgagtc ggctacggcc
      901 tgatcgacgc ccatgccgcc gtgcgcatgg ccgagacctg ggagcggcag tcgaccgccg
      961 ccaacgaggt gacgctcacc gccgcgtcgg cgccccgcaa ggcgatcccc gacaacggcg
     1021 tgctgaccga cagcgtggtg gtcgccgaca gcgtcgagat cgaccgcgtc gaggtcgaac
     1081 tcaacatcag ccatccgtgg gtgggcgacc tcaaggtcac cctggtcggc cccgacggca
     1141 ccgagagcgt gctggtcaac cggcccggca agaacccgga cgacccgggc gccaccggcg
     1201 ccggcagctc gaatttcgtc tacaccgtgg gcagcaccca tcattacggc gaggccagcg
     1261 gcggcacttg gacgctgcgg gtggaagacc agcacggcgg ccacgtcggc acgctgaaca
     1321 gctggaagct gaacctgtac ggcgacgccg ccacggccga cgacgtcttc gtcttcacca
     1381 acgagtacat cgacatgggc ggcgacgcga acgcggcgcg ccgtgtcctg tcggatgagg
     1441 gcggcagcga caccctcaat gcgtccgccg tcagctacga tacctacctc gacctcagcg
     1501 gcaccgccgc cagcacgatc gccaagaacg atctgtccat cgcccagggc acggtgatcg
     1561 agaaggcgta taccggcgac ggtgccgacg tggtgatcgg caacgccgcc gacaacatgc
     1621 tgtcgggcgg ccgcggcgcc gacacgctgt acggcggcgc cggcagcgac cgcctgctgg
     1681 gcggcaaggg cgacgacctc ctcaacggtg gggcgggggc cgacgtcctc gatggcggcg
     1741 agggcttcga caccgtgtcg tacctgggcg ccagccaagg cgtcgcggtc gatctcggcg
     1801 ctgcgcgcgg caccggcggc gaggcggcag gggacagcct ggtgggcatc gaggcggtgg
     1861 aaggctcggc cttcgccgac acgctggccg gcggcgccgg cggcgacgtg ctcgag
//
LOCUS       DATIKR010000542         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_201453, whole genome shotgun sequence.
ACCESSION   DATIKR010000542 DATIKR010000000
VERSION     DATIKR010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201453"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VLL76_08370"
     CDS             complement(<1..920)
                     /locus_tag="VLL76_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008595886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSV29560.1"
                     /translation="MTASASPWGHELRHMAALAWPIVLTNLAQIAIGTTDTLMMGWLG
                     PADLAAGTLGANLFFAFFILGIGLVMATAPMLAQTLGHRRHAVRESRRIVRQGLWLCA
                     LYSLPVWGVLWQAEAILVLIGQDPALAKVAGAYVRALEWSLLPALGVVVLRSFIAALE
                     RPKAGMVVTMLAVALNAFVNWLLMFGNWGLPAMGVVGAGVASTLSNLFMFAALLGYVL
                     RDRQFRRFHLMGRFWRPDWSKFRELLRIGIPMGLALGFEVTGFNVAAFLMGLIGTAAV
                     AAHAIALQIASATFMVPLGIGQAATVRVGLA"
     gene            complement(971..>1628)
                     /locus_tag="VLL76_08375"
     CDS             complement(971..>1628)
                     /locus_tag="VLL76_08375"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSV29561.1"
                     /translation="LSDLHPHCLDGVMARAARLVGGLTVDLAVVTGDFQEQGRPSAHD
                     TARDVLPLLNAYRASHGTFAILGNHDSHDMADALAAHGVAVLINEHAVIERDGERLVL
                     VGTDDVVRFFTEAAVTALTHRPEGFSVALVHSAELADVAAQAGIRLYLSGHTHGGQIC
                     LPGGTPVVTASDAPRCMAAGSWRVGAMHGHTSRGVGVGLPPLRYNCPGEIVRITLRRR
                     "
BASE COUNT          276 a          585 c          571 g          196 t
ORIGIN      
        1 gccagcccga cccgcacggt ggcggcctgg ccgatgccca gcggcaccat gaaggtggcc
       61 gaggcgatct gcagcgcgat ggcgtgggcg gccacggcgg cggtgccgat caggcccatc
      121 aggaaggcgg cgacgttgaa gccggtgacc tcgaagccca gcgccagccc catggggatg
      181 ccgatgcgca gcagctcgcg gaacttgctc cagtccggcc gccagaaccg gcccatcaga
      241 tggaagcggc ggaactggcg gtcgcgcagg acatagccca gcagggccgc gaacatgaac
      301 aggttcgaca gggtcgaggc gacgccggcg cccaccacgc ccatggcggg caggccccaa
      361 ttgccgaaca tcagcagcca gttgacgaag gcgttcagcg ccaccgccag catggtcacc
      421 accatgccag ccttgggccg ctccagcgct gcgatgaacg agcgcagcac caccacgccc
      481 agggccggca acaggctcca ttccagcgcc cggacatagg cgccggccac cttggcgagg
      541 gcagggtcct gcccgatcag caccaggatg gcctcggcct gccacagcac gccccagacc
      601 ggcaggctgt acagcgcgca cagccacaat ccctggcgga cgatgcggcg gctttcgcgc
      661 acggcgtggc ggcggtggcc cagggtctgc gccagcatgg gcgcggtcgc catcaccagg
      721 ccgatgccca ggatgaagaa ggcgaagaac aggttggcgc ccagcgtgcc ggcggccaga
      781 tccgccggcc ccagccaccc catcatcagg gtgtcggtgg tgccgatggc gatctgcgcc
      841 aggttggtga gcacgatggg ccaggccaaa gccgccatgt ggcgaagctc gtggccccag
      901 ggggaggcgg aggcggtcat ggacggcagt atgcctgcct gccgcccgct gcgtcacccc
      961 cgcgcaggat ctagcgccgg cgcagggtga tccggacgat ctcgcccggg caattgtagc
     1021 gcaacggcgg caacccgact ccgaccccgc gcgaggtatg gccgtgcatg gcgccgaccc
     1081 gccagcttcc cgccgccatg caccggggcg cgtcgctggc cgtgacgaca ggggtgccgc
     1141 cgggcagaca aatctggccg ccatgggtgt ggcccgacag gtacagccga atgcccgcct
     1201 gcgcagccac gtcggccagt tcggccgaat ggaccagggc gacgctgaac ccctccgggc
     1261 ggtgggtcag ggcggtgacg gccgcctcgg tgaagaagcg caccacgtcg tcggtgccca
     1321 ccagcaccaa gcgctcgcca tcgcgctcga tcaccgcatg ctcgttgatc aataccgcga
     1381 ctccgtgcgc cgccagggcg tcggccatgt cgtggctgtc gtggttgccc aggatggcga
     1441 aggtgccgtg gcttgcgcga taggcgttca gcagcggaag cacgtcgcgc gccgtgtcgt
     1501 gggccgacgg ccgcccctgc tcctgaaagt cgccggtcac caccgccagg tccaccgtca
     1561 ggccgccgac caaccgcgcc gcccgcgcca tcacgccgtc caggcaatgc gggtgcaggt
     1621 cgctcagg
//
LOCUS       DATIKR010000543         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_56073, whole genome shotgun sequence.
ACCESSION   DATIKR010000543 DATIKR010000000
VERSION     DATIKR010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56073"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..1606)
                     /locus_tag="VLL76_08380"
     CDS             complement(188..1606)
                     /locus_tag="VLL76_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HSV29562.1"
                     /translation="MGKATGFKEFQRQTPGYEKPEERVKHYNEFTKPLSDKELSEQGA
                     RCMDCGVPFCHQGCPVNNMIPDWNDLVYRNRWQEAVETLHSTNNFPEFTGRVCPAPCE
                     AACTLNIQDSPVAIKTIEHAIVERAWAEGWVKPDTAKPRTGKKVAVVGAGPAGMAAAQ
                     QLARAGHSVVLFEKNAKVGGLLRYGIPDFKLDKAIIDRRAGQMQEEGVELRCNVNVGV
                     DLPVKDLLAGFDAVVLSGGSEKPRDLPVPGRDLKGVHFAMDFLTQQNRRVSGEGVQGG
                     NDILATGKKVVVIGGGDTGADCVGTSNRHGAASVTQIEIMGKPPEKENKLVTWPLWPN
                     KLRTSTSHDEGCERRWSVATQSFFGENGVVKGLNCVEVDAKFQPIAGTEFKLEADLVL
                     LAMGFVHPIHEGLVDGLGIEKDARGNVKADTVKYQTSNPKVFACGDIRRGQSLVVWAI
                     REGRQAARAVDEFLMGASELPR"
     gene            complement(1608..>2262)
                     /locus_tag="VLL76_08385"
     CDS             complement(1608..>2262)
                     /locus_tag="VLL76_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase subunit alpha"
                     /protein_id="HSV29563.1"
                     /translation="DYVGKGLSGGRIVIYPPKASKIVAEENIIVGNTVLYGAVEGECY
                     FRGVGGERFAVRNSGAIAVVEGVGDHGCEYMTGGCVLVIGPTGRNFAAGMSGGVAYVL
                     DEAGDFDKRCNMAMVDLEPVAAEEEANCKFEGQCNDLEAHGLVDVMHDMTRDDASRIR
                     ALLHNHHHYTGSKRAHDILLNWEYYMPKFVKVMPVDYRRALQEMQKAQAPKLAAGGR"
BASE COUNT          363 a          735 c          739 g          425 t
ORIGIN      
        1 tttatgtgca tattatgtac acattccact ttcgcttaaa tcatagccgg aagtggagag
       61 tcaatgcaga cgcaaggaat tatacggaca gttgatattc cattcgcacc aggttcattg
      121 gacagcgatg aaccaaaaaa aggggcgccc gacgggcgcc ccttttcttc cgagaaatgt
      181 gatgcgatca gcgcggaagt tcgctggcgc ccatcaggaa ttcgtccacc gcgcgggcgg
      241 cttggcggcc ttcgcgaatg gcccacacca ccagcgactg gccccggcgg atgtcgccgc
      301 aggcgaacac cttggggttc gaggtctggt acttgacggt gtcggccttg acgttgccgc
      361 gcgcgtcctt ctcgatgccc aggccgtcga ccagaccctc gtggatcggg tggacaaagc
      421 ccatggcgag caggaccagg tcggcttcca gcttgaactc ggtgccagcg atgggctgga
      481 acttggcgtc gacctcgacg cagttcaggc ccttgaccac gccattctcg ccaaagaagg
      541 actgggtggc gaccgaccag cggcgctcgc agccctcgtc atgcgaggtc gaggtgcgca
      601 gcttgttggg ccacagcggc caggtgacca gcttgttttc cttctcgggc ggcttgccca
      661 tgatctcgat ctgggtcacc gaggcggcgc cgtgacggtt cgaggtgccg acgcagtcgg
      721 cgccggtgtc gccgccgccg atcaccacca ccttcttgcc ggtggccagg atgtcgttgc
      781 cgccctgcac gccctcgccg gaaacccggc ggttctgctg ggtcaggaag tccatggcga
      841 aatggacgcc cttgaggtcg cggccgggca ccggcaggtc gcgcggcttt tccgagccgc
      901 ccgacagcac caccgcgtcg aagccggcca gcaggtcctt gaccggcaga tcgacgccga
      961 cgttgacgtt gcagcgcagc tcgacgccct cttcctgcat ctggccggcg cggcggtcga
     1021 tgatcgcctt gtccagcttg aagtcgggga tgccatagcg cagcaggccg ccgaccttgg
     1081 cgttcttctc gaacagcacc accgaatggc cggcgcgggc aagctgctgg gcggcggcca
     1141 tgccggccgg gccggcgccg accacggcca ccttcttgcc ggtgcgcggc ttggcggtgt
     1201 cgggcttgac ccagccctcg gcccaagcgc gttcgacgat ggcgtgctcg atggtcttga
     1261 tggcgaccgg actgtcctgg atgttcaggg tgcaggcggc ctcgcacggg gcggggcaga
     1321 cgcggccggt gaactcgggg aagttgttgg tcgagtgcag cgtctcgacc gcttcctgcc
     1381 agcggttgcg atagaccagg tcgttccagt ccgggatcat gttgttcacc gggcagccct
     1441 ggtggcagaa cggcacgccg caatccatgc agcgggcgcc ctgctcggac aattccttgt
     1501 ccgacagcgg cttggtgaac tcgttgtagt gcttcacgcg ctcctcgggc ttttcatagc
     1561 ccggggtctg acgctgaaac tccttgaagc ccgtagcctt acccatctta gcggcctccc
     1621 gcagcgagct taggagcctg ggccttctgc atttcctgca aggcgcggcg gtaatcgacc
     1681 ggcatcacct tgacgaactt gggcatgtaa tactcccagt tgagcaggat gtcgtgggcc
     1741 cgcttgctgc cggtgtagtg gtggtggttg tgcagcagcg cgcggatgcg gctggcgtcg
     1801 tcgcgggtca tgtcgtgcat gacgtccacc aggccgtggg cctcgaggtc gttgcactgg
     1861 ccctcgaact tgcaattggc ctcttcctcg gccgcgaccg gctccagatc gaccatcgcc
     1921 atgttgcagc gcttgtcgaa gtcgccggcc tcgtccagga cataggcgac gccacccgac
     1981 atgccggcgg cgaagttgcg ccccgtcggg ccgatgacca ggacgcagcc gccggtcatg
     2041 tattcgcagc catggtcgcc cacgccctcg accaccgcga tggcgcccga gttgcggacg
     2101 gcgaagcgct cgccgccgac gccgcggaag tagcactcac cctcgacggc accgtacagc
     2161 acggtgttgc cgacgatgat gttctcctcg gcgacgatct tcgacgcctt gggcggatag
     2221 atgacgatgc ggccgcccga caggcccttg ccgacataat cg
//
LOCUS       DATIKR010000544         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_116869, whole genome shotgun sequence.
ACCESSION   DATIKR010000544 DATIKR010000000
VERSION     DATIKR010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116869"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VLL76_08390"
     CDS             <1..524
                     /locus_tag="VLL76_08390"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009603579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HSV29564.1"
                     /translation="ALQGIGFDGYAIGGLAVGEGQELMFSTLDFTTPLLPTDKPRYLM
                     GVGKPSDIIGAVLRGVDMFDCVMPTRSGRTAQAFTRRGTVNLRNARHQDDPRPLDEGC
                     SCPACRNYSRAYLHHLTRSEEILGPMLLTWHNIQFYQDTMRGLRQAIQDGNVQDFAAK
                     ALAEEARGDIEAL"
     gene            complement(682..1458)
                     /locus_tag="VLL76_08395"
     CDS             complement(682..1458)
                     /locus_tag="VLL76_08395"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HSV29565.1"
                     /translation="MPYENIIVETRGRVGLITLNRPKAMNALCNALIAELGKALDAFE
                     KDDEVGAIVLTGSEKAFAAGADIKEMASKSYMDCYLEDFITNGWERVTKCRKPIIAAV
                     AGYALGGGCEVAMMCDFILAADNAKFGQPEITLGIIPGAGGTQRLTRAVGKAKAMEMC
                     MTGRMMDAAEAERVGLVSRIVPAADLVEEAVKVADRIAGMSRPVVMMAKEAVNAAFET
                     TLAQGVHFERRLFHSTFATDDQKEGMAAFAEKRTPNFKNR"
     gene            complement(1472..1831)
                     /locus_tag="VLL76_08400"
     CDS             complement(1472..1831)
                     /locus_tag="VLL76_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29566.1"
                     /translation="MRKITTLLGSLALLAAVASGPALAQGFLGSYEDLPLAPGLAEVA
                     GTGLSFDTPGGRIVEAYAKGNGTAADILKFYSTTLPQLGWTRESDTLYRREAEVLKLD
                     TKAQGKGVVVHFTISPE"
     gene            complement(1850..>2431)
                     /gene="mutM"
                     /locus_tag="VLL76_08405"
     CDS             complement(1850..>2431)
                     /gene="mutM"
                     /locus_tag="VLL76_08405"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HSV29567.1"
                     /translation="EPPGPHDHVEFRTDDGTTVTFTDPRRFGLLTLCGEDDLAAHPML
                     SCLGPEPLGDAFTPKILAAALAGKATPIKSALLDQGVVAGLGNIYVCESLFRAGIAPT
                     RLAGSLKPNEIQRLVPLIKDVLEEAIRSGGSSLKDHVQPTGELGYFQHSFAVYDREGQ
                     PCPGCDCDLAKTGGVRRIVQAGRSTFYCAKRQR"
BASE COUNT          379 a          800 c          856 g          396 t
ORIGIN      
        1 cggcgctgca gggcatcggc ttcgacggct acgccattgg cgggctggcg gtgggcgagg
       61 ggcaggagct gatgttctcg acgctcgact tcaccacgcc gctgctgccc accgacaagc
      121 cgcgctacct gatgggcgtc ggcaagccca gcgacatcat cggcgccgtg ctgcgcggcg
      181 tcgacatgtt cgactgcgtc atgccgacgc ggtcgggccg caccgcccag gccttcaccc
      241 gccggggcac ggtcaacctg cgcaacgcgc gccaccagga cgacccgcgc ccgctggacg
      301 aaggctgttc ctgcccggcc tgccgcaact actcgcgcgc ctacctgcac cacctgaccc
      361 gctcggaaga gatcctgggg ccgatgctgc tgacctggca caacatccag ttctaccagg
      421 acaccatgcg cggcctgcgg caggcgatcc aggacgggaa cgtgcaggac ttcgcggcga
      481 aggcgttggc ggaagaggcg cggggggata tcgaggcgtt gtaacctcgc tggccctcgg
      541 cccccaccca aaccctcccc cgctgcgcga gggagggctt aattgggacg agcgatagcg
      601 aggactatgc gcgttgagcg cgccgaagcg cagcggagga gccaagcccg cggatgcggg
      661 cgcccggcgc ctgagggcta atcacctatt cttgaagttc ggcgtccgct tctcggcgaa
      721 ggcggccatg ccttccttct ggtcgtcggt ggcgaaggtg gaatggaaca ggcggcgttc
      781 gaaatggacg ccctgggcca gggtggtttc gaaggcggcg ttgacggcct ccttggccat
      841 catcaccacc ggccggctca tgccggcgat gcggtcggcg accttgaccg cttcctcgac
      901 cagatcggcg gccgggacga tgcggctgac caggccgacg cgctcggcct cggcggcgtc
      961 catcatgcgg ccggtcatgc acatttccat ggccttggcc ttgccgacgg cgcgggtcag
     1021 gcgctgggtg ccgccggcgc cggggatgat gcccagcgtg atctcgggct ggccgaactt
     1081 ggcgttgtcg gcggccagga tgaagtcgca catcatggcg acctcgcagc cgccgcccag
     1141 ggcatagccg gccacggcgg cgatgatggg cttgcggcac ttggtgacgc gttcccagcc
     1201 gttggtgatg aagtcctcga gatagcaatc catgtaggac ttggacgcca tctccttgat
     1261 gtcggcgccg gcggcgaagg ccttttccga gccggtcagc acgatggcgc cgacctcgtc
     1321 gtccttctcg aacgcgtcca gcgccttgcc cagttcggcg atcagggcgt tgcacagggc
     1381 gttcatggcc ttgggccggt tgagcgtgat caggccgacg cggccgcggg tctcgacgat
     1441 gatgttttcg taaggcatga ctgcctccgc attattccgg ggaaatggtg aaatgcacca
     1501 ccacgccctt gccctgggcc ttggtgtcga gcttcaacac ctcggcctcg cggcgataca
     1561 gggtgtcgct ctcgcgcgtc cagcccaact ggggcagggt ggtggaatag aatttcagga
     1621 tgtcggcggc cgtcccgttg cccttggcat aggcttcgac gatgcgcccg ccgggggtgt
     1681 cgaaggacag gccggtgccg gccacctcgg ccaggccggg cgccagcggc agatcctcgt
     1741 acgagcccag gaatccctgg gccagggccg ggccggaagc cacggcggcg aggagagcaa
     1801 ggctgcccag cagggtcgtt atcttcctca tggcgactac ggtgatacct cagcgctggc
     1861 gtttcgcaca gtagaaagtg gaccgcccgg cctggacgat gcggcgcacg ccgccggtct
     1921 tggcgagatc gcagtcgcag ccggggcagg gctggccctc gcggtcgtag acggcgaaac
     1981 tgtgctggaa atagcccagt tcgccggtgg gttgcacgtg atccttcagc gacgagccgc
     2041 cggaccggat ggcttcctcc agcacgtcct tgatcagggg caccagccgc tggatctcat
     2101 tgggcttgag cgagccggcc agccgggtcg gcgcgatgcc ggcgcggaac aggctttcgc
     2161 acacatagat gttgcccagg cccgccacca ccccctggtc gagcaaggcc gacttgatcg
     2221 gggtcgcctt gcccgccagc gcggcggcca ggatcttggg cgtgaaggca tcgcccaacg
     2281 gctcgggccc caggcaggac agcatgggat gggcggccag atcgtcctcg ccgcacaggg
     2341 tcagcaggcc gaagcggcgc gggtcggtga aggtgaccgt ggtgccgtcg tcggtacgga
     2401 attccacatg gtcgtgcggc cccggcggct c
//
LOCUS       DATIKR010000545         2343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_226260, whole genome shotgun sequence.
ACCESSION   DATIKR010000545 DATIKR010000000
VERSION     DATIKR010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226260"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..248)
                     /locus_tag="VLL76_08410"
     CDS             complement(3..248)
                     /locus_tag="VLL76_08410"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HSV29568.1"
                     /translation="MADLPPDIAQMSFEEALAELDKIVRQLETGATKLDDSIAAYERG
                     AKLKQHCEAKLKEAQARVDRIVLGPDGAVSVAPANIE"
     gene            complement(481..1368)
                     /locus_tag="VLL76_08415"
     CDS             complement(481..1368)
                     /locus_tag="VLL76_08415"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HSV29569.1"
                     /translation="MKIRLLHLDGSLTAQPTLASLAGQGLAQVVNLKPDGKRLRLWAT
                     RDAMTDFARRLCEEEPPPGDGAEVTFMGSGDYHHLTAPLVGRTKGPLSVVHFDNHPDW
                     GMWPPAYHCGSWVNRVLDMGHVAKVVTIGPCAADTTWPQFKGANLGALESDRFELHPW
                     RMAPSRVIGKGSIRWNNLGECDWSGFVDDLARRLPTERVYVSIDKDVLHPDEAVTNWN
                     QGEMRLDHIFACLRALAARRRIVGVDVCGEYAPPRFDSLPKRILAHFDQPTPPVAPDL
                     RRNDESNGRLLAELAALGL"
     gene            1524..1730
                     /locus_tag="VLL76_08420"
     CDS             1524..1730
                     /locus_tag="VLL76_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29570.1"
                     /translation="MDHHQHLGDEQDGQPQAGFRLSWPGHDQPAAHPARKGRLLDLLP
                     LRLSAFASRRGLTGWPVKLSSPGS"
     gene            1837..2109
                     /locus_tag="VLL76_08425"
     CDS             1837..2109
                     /locus_tag="VLL76_08425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29571.1"
                     /translation="MLTLQDCVDMCGLPPDVVDAIADHEHLPSILAAELGECLCSSPS
                     GRALIHRFILDGIAEAMRRHDGYRLDRMERALDQFRSSHPGSAVMG"
BASE COUNT          374 a          752 c          819 g          398 t
ORIGIN      
        1 ccctattcga tgttggcggg cgcgacggaa acggcgccgt cgggccccag cacgatgcgg
       61 tcgacgcggg cctgggcttc cttcagcttg gcctcgcaat gctgcttcag cttggcaccg
      121 cgctcgtagg cggcgatgga atcgtcgagc ttggtggcgc cggtttcgag ctggcggacg
      181 atcttgtcca gttcggccag cgcctcttcg aagctcatct gggcgatgtc gggcggcaga
      241 tcggccatgg cgaaaaagtt ccagtttcca atgaagggcg gaagtttacg aatcggaaac
      301 cgggaaagca aggtcaaccc tcgcaagcgc gtcagcggat ccacaacccc gtcatccccg
      361 cgaaggcggg gaaccatgtt gtgggcgggc acggagctga ccacaaagta tcgagcggcg
      421 gatgcatgga ttccagcttt cgcgggaatg acgggttttt gcccgagcgg gcgagggaga
      481 ctataggccc aacgccgcca actcggccaa cagacggccg ttggattcat cgttgcggcg
      541 caggtcgggg gccacggggg gcgtgggctg gtcgaaatgg gccaggatgc gcttgggcag
      601 gctgtcgaag cggggcgggg cgtactcgcc gcatacgtcc acgccgacga tgcggcggcg
      661 ggcggccagg gcgcgcaggc aggcgaagat gtggtcgagc cgcatctcgc cctggttcca
      721 gttggtcacc gcctcgtcgg ggtgcagcac gtccttgtcg atgctgacat agacgcgctc
      781 ggtgggcagg cggcgggcga ggtcgtcgac gaagccgctc cagtcgcatt cgcccagatt
      841 gttccagcgg atgctgccct tgccgatcac gcgcgacggc gccatccgcc agggatgcag
      901 ctcgaagcgg tcggattcaa gggcgcccag attggcgccc ttgaattgcg gccaggtggt
      961 gtcggcggcg caggggccga tggtgacgac cttggcgacg tggcccatgt cgagcacgcg
     1021 gttgacccac gagccgcaat gataggccgg cggccacatc ccccaatcgg ggtgattgtc
     1081 gaaatgcacc accgacagcg gccccttggt ccggcccacc agcggcgcgg tcaggtggtg
     1141 gtagtcgccc gagcccatga aggtgacctc ggcgccgtcg ccgggcggcg gctcctcctc
     1201 gcacaggcgg cgggcgaaat cggtcatggc gtcgcgcgtc gcccacagcc tcagccgttt
     1261 gccgtcgggc ttgaggttga cgacctgcgc cagtccctgg ccggccagcg aggccagggt
     1321 gggttgcgcg gtcagcgagc cgtcgaggtg aagcaggcgg atcttcatgg ggtgggtgta
     1381 gagacgcggc cgcccccgcg gcaatgccga taagggatag accgacggat atacttccaa
     1441 tgatccagcc gcttaaccaa atggtaactc tctttagagg cgaacctggt gtaaaccggt
     1501 tatgaacgtg tgggggcgct ttcatggacc atcatcagca ccttggcgac gagcaggacg
     1561 gccagcctca ggccggtttc cgcctgtcct ggccgggcca tgaccagccc gccgcccacc
     1621 cagcccgcaa ggggcggctg cttgacctat tgccgctgcg gttgtcggcc ttcgcttcgc
     1681 gccgggggct gaccggctgg ccggtgaaac tttcttcccc cggctcttaa cgccttgtaa
     1741 tcaagtgacc gcttgatcgg tcccgccggc tcccaatctg cccaggttca caggccccgc
     1801 cgaaagaaca ggggcaccga acgggagccg aacgtcatgc tgaccttgca ggactgcgtg
     1861 gacatgtgcg ggttgccgcc cgacgtcgtc gatgccatcg ccgaccatga gcatctgcct
     1921 tcgatcctgg cggccgaatt gggtgagtgc ctgtgctcgt cgcccagcgg ccgcgccttg
     1981 atccaccgct tcatcctgga cggcatcgcc gaggccatgc gccggcacga cgggtaccgc
     2041 ctggaccgca tggagcgggc gctggaccag ttccgctcga gccatcccgg ctcggcggtg
     2101 atgggctagc cggggcgccg cgatcgggtt agtctcccgg cggttgccgc caggagatcg
     2161 caacatggcc caggacgacg tcatcgccct gctcgggtcg cccgccttgt gggggggcga
     2221 ggtcccgcgc cgcgtcgaga ctcacatctc gctcgtcttc ctggccggcg agcgggtgct
     2281 gaagctgaag aaggcggtgc gcctgccctt cctcgacttc accgatccgc aggcgcgccg
     2341 cgc
//
LOCUS       DATIKR010000546         2372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_116879, whole genome shotgun sequence.
ACCESSION   DATIKR010000546 DATIKR010000000
VERSION     DATIKR010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116879"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1098)
                     /locus_tag="VLL76_08430"
     CDS             complement(<1..1098)
                     /locus_tag="VLL76_08430"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSV29572.1"
                     /translation="MTWLQGFVAFAVPIMAVLANRGTMIPLALLALGGLAWAIRQRRF
                     ATAVPPAIAIAMAVVVGWAALTVAWAELPALVLPKAAALTGLLIAGLLAFALPVPAGT
                     ARRAAIVGVVAAAALVIFEIKARYPLTMLLADTVGDGAMAIEGYLPTRFKPSTTILAL
                     LAVALAGPAVARGRWLVPVLVVPPVAYAGILSGSMSALAALAAGAVGWGAVMLLPRVA
                     PVLAGVAVAAGMVVAPAVIGLPGPYDLAMQYPSLPNSALHRVMIWRFASEKALERPAL
                     GWGLEASRELPGGKEGGELWMRATPDAPLVAQMQQRLPLHPHNFAVQIWLELGAVGIL
                     LSIGLLAAVLRGIVRTMPARYDRAAAVAGVTA"
     gene            complement(1250..2182)
                     /locus_tag="VLL76_08435"
     CDS             complement(1250..2182)
                     /locus_tag="VLL76_08435"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV29573.1"
                     /translation="MKARLDWISHRDAFDAMVAEAGRSNLLQSWAWGEAKAEAEGWRP
                     RRAVIAYGTNALACVQVLEKRKGPLRVARINRGPLWLADDLTAAARTEAYGALRRQWR
                     WWNGGILLIAPELAAGEAALLQGFRPRSAPCWRSAWVELFSRDIETIRKSLNGKWRNM
                     LVNAEKAGLAVEVMTGAAGIDWLLPRYRELMQAKGFAGISPALLTALARHADSDDLLT
                     LVARAGGEPASAVLVARHGLAATYLVGWNDEAGRKTRANHLLLWRALSECKDRGVRWF
                     DVGGIDDVLTPGVASFKRGLGGEEYVQVGEWLSV"
     gene            complement(2179..>2372)
                     /locus_tag="VLL76_08440"
     CDS             complement(2179..>2372)
                     /locus_tag="VLL76_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29574.1"
                     /translation="FAVASVLYARLRAARLPVESWPDLPPEAGDGAARRLRRTLLLLP
                     CHQGCDATELASAYAGALR"
BASE COUNT          386 a          894 c          804 g          288 t
ORIGIN      
        1 cgcggtgacg ccggccaccg ccgccgcccg gtcgtagcgg gccggcatgg tgcggacgat
       61 gccccgcaac acggccgcca gcaggccgat ggacagcaga atcccgaccg cccccagctc
      121 gagccagatc tgcaccgcga aattgtgggg atgcagcggc aggcgttgct gcatttgcgc
      181 caccagcggc gcgtcgggcg tcgcccgcat ccacaattcg ccgccctcct tgccgcccgg
      241 cagttcgcgc gaggcctcca ggccccagcc gagcgccggc cgctccagcg ccttctcgga
      301 ggcgaagcgc cagatcatta cccggtgcag cgccgagttc ggcaggctgg gatattgcat
      361 ggcgaggtcg taggggccgg gcaggccgat caccgccggc gccaccacca tgccggccgc
      421 caccgccacg ccggccagaa ccggggcaac gcggggcagc agcatgacag cgccccaccc
      481 caccgcgccg gccgccagcg ccgccagggc gctcatgctg cccgacagga tgccggcata
      541 ggccaccggc ggcaccacca gcaccggcac cagccagcgc ccgcgcgcca ccgccggccc
      601 ggccagggcc acagccagca aggccaggat ggtggtcgat ggcttgaagc gggtgggcag
      661 atagccctcg atcgccatcg cgccgtcgcc gaccgtgtcg gccagcagca tggtcagcgg
      721 atagcgcgcc ttgatctcga agatcaccag cgcggccgcc gccaccacgc cgacgatggc
      781 ggcccgccgc gcggtgccgg cgggcaccgg cagcgcgaag gcgagcaggc cggcgatcag
      841 cagcccggtc agcgccgccg ccttcggcag caccagcgcc ggcaattccg cccacgccac
      901 cgtcagtgcc gcccacccca ccaccacggc catggcgatg gcgatcgcgg gcggcacggc
      961 ggtggcgaaa cggcgctgcc ggatggccca ggcgaggccg cccagggcca gcagggcgag
     1021 cgggatcatg gtgccgcggt tggcgaggac ggccatgatc ggaacggcga aggccacgaa
     1081 gccttgcagc caggtcatca ccatgccgtc ccctccccta gagtattttc cgctctgacc
     1141 aactcagagc ggaaaatgcg ataagcccaa gcggcgtccg agcctggctc gccccggagg
     1201 ggcggccgcc aaaggcaaaa actagagccg gttccatatg gaaacggctc tagaccgaaa
     1261 gccattcgcc gacctgcacg tattcctcgc cgcccaggcc ccgtttgaac gaggccacgc
     1321 ccggcgtcag cacgtcgtcg atccccccga cgtcgaacca tctcacgccc cggtccttgc
     1381 attcggacaa ggcccgccac agcaacagat ggttggcgcg ggtcttgcgc ccggcctcgt
     1441 cgttccagcc gaccagatag gtggcggcca gaccgtggcg ggcgaccaat acggccgagg
     1501 ctggttctcc gccggcgcgg gccaccaggg tcagcaggtc gtcggaatcg gcatggcggg
     1561 ccagcgcggt cagcaacgcc ggcgaaatgc cggcaaaacc cttggcctgc atcagctcgc
     1621 gatagcgcgg cagcagccag tcgatgccgg cggccccggt catcacttcg accgccagcc
     1681 cggccttctc ggcgttgacc agcatgttgc gccacttgcc gttcaggctc ttgcggatcg
     1741 tttcgatatc gcgactgaac agctcgaccc aggccgagcg ccagcacggg gcgcttcgcg
     1801 gccgaaatcc ttgcagcagg gccgcctcgc cggccgccaa ttcgggggcg atcagcagta
     1861 tgccgccgtt ccaccaccgc cactgccggc gcagggcgcc ataggcttcg gttcgcgcgg
     1921 cggcggtcag gtcgtcggcc agccacagcg gcccccggtt gatgcgggcg acgcgtagcg
     1981 gccccttgcg tttctccagt acctgcacgc aggccagcgc gttggtgcca taggcgatga
     2041 cggcccggcg cggccgccag ccctcggcct cggccttggc ttcgccccag gcccaggatt
     2101 gcagcaggtt cgagcgcccg gcttccgcca ccatggcgtc gaacgcgtcg cggtgcgaga
     2161 tccagtccag ccgcgccttc atcgcagcgc ccccgcatag gccgaagcca gctcggtggc
     2221 atcgcagccc tggtggcagg gcagcagcag cagggtgcgg cgcaggcggc gggcggcgcc
     2281 atcgccggcc tcgggcggca aatctggcca gctttccacc ggcaggcggg cggcccgcag
     2341 gcgggcatac agtaccgagg cgacggcgaa ac
//
LOCUS       DATIKR010000547         3739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_153548, whole genome shotgun sequence.
ACCESSION   DATIKR010000547 DATIKR010000000
VERSION     DATIKR010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153548"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VLL76_08445"
     CDS             complement(<1..508)
                     /locus_tag="VLL76_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HSV29575.1"
                     /translation="MNDGLPFFDILFFAMVAAFLVLRLRSMLGRRTGNERPPTDWTGA
                     SKPSDNVIDLASARKPAAEPLPEGPVGEGVAAIRAADPSFSMAEFVSGARAAFAMIVE
                     AFAAGDKATLKPLLSDDVYRGFAQAIDARVEAGETLQTELVSVRSADLVDARMRGSVA
                     EVTVRFRSE"
     gene            609..1058
                     /locus_tag="VLL76_08450"
     CDS             609..1058
                     /locus_tag="VLL76_08450"
                     /inference="COORDINATES: protein motif:HMM:NF008528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HSV29576.1"
                     /translation="MPWLIVAALIAVPVIEIALFIKSAQWIGIVQTILVAIGAGMLGI
                     YLVKRQGIGTMLRARAMLDRGEVPVAEAFDGLCLAVAGVLLFLPGFATDFVALALLLP
                     PVRAALRLWLGRHVHAVVRSGQPPQPQGPPVIETDYRVVKDDDEPRP"
     gene            1136..1600
                     /gene="secB"
                     /locus_tag="VLL76_08455"
     CDS             1136..1600
                     /gene="secB"
                     /locus_tag="VLL76_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HSV29577.1"
                     /translation="MTDTAETALPPLVVNGQYIKDLSFEVPGAPAIYGEMSGQNPDIP
                     IHVDINATPLKDNVFEVVLHLKVEAKLADRPVFIAELAYGGVFTINVPQEHAQAMLLI
                     ECPRMLFPFARNIIADMTRDGGFPPLMIQPIDFVQLYRSRLDAMSQEAAGNA"
     gene            complement(1706..2407)
                     /gene="dnaQ"
                     /locus_tag="VLL76_08460"
     CDS             complement(1706..2407)
                     /gene="dnaQ"
                     /locus_tag="VLL76_08460"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HSV29578.1"
                     /translation="MREIVLDTETTGFDPLAGHRIVEIGCVELLNHLPTGQVFHVYIN
                     PERDMPDEAFKVHGLSNEFLADKPVFAEVVADFLAFIGDDPLVIHNAEFDMRFLNAEM
                     TRLGFPAMPMSRSIDTVIMARKKFPGAQANLDALCRRFEIDNTHRTHHGALLDSELLA
                     EVYLQLIGGRQPGFELGLSGKSDTGAKVAVVREARPPRPHAPTPEELEAHAAFVGKLK
                     KAIWLREPEAEAKAG"
     gene            complement(2426..3019)
                     /gene="coaE"
                     /locus_tag="VLL76_08465"
     CDS             complement(2426..3019)
                     /gene="coaE"
                     /locus_tag="VLL76_08465"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943216.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HSV29579.1"
                     /translation="MKILGLTGSIGMGKSTAARMLRRMGVPVHDADATVHALMAQGGA
                     AVAMVEAAFPGVVKEGAVDRAELGRRVFGRPDQLRRLEAILHPLVRQAERAFLERHRR
                     RRTRLVVLDIPLLFETGGERRCDKVAVVTAPAFLQAQRVLKRPGMTPARLAAIRSQQM
                     ADGEKRRRADFVIPTGLGMRPALRRLRAVVTLMRNSD"
     gene            complement(3148..>3739)
                     /locus_tag="VLL76_08470"
     CDS             complement(3148..>3739)
                     /locus_tag="VLL76_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSV29580.1"
                     /translation="LAERVGAVNTLVVKDDGTIEGRNTDAFGFLENLRRGAPAWRPDS
                     GPAVVLGAGGAARAVAAALVDAGVPEIRVVNRSTDRAEHLAKDIGGNFRTEGWDRRAA
                     ALDGAALVVNTTTLGMTGQPPLDLDLTALPADAVVNDIVYAPLDTDLLKAARARGNTV
                     VDGIGMLLYQAVPGFEAWFGMRPEVTAELRDFVLGH"
BASE COUNT          596 a         1250 c         1304 g          589 t
ORIGIN      
        1 gttccgagcg gaagcggacg gtgacctcgg cgacgctgcc gcgcatgcgg gcgtccacca
       61 ggtccgcgga acgcaccgaa accaattcgg tctgcagcgt ttcgccggcc tcgacgcggg
      121 cgtcgatggc ctgggcgaaa ccgcgataga cgtcgtcgga cagcagcggc ttcagggtcg
      181 ccttgtcgcc ggcggcgaag gcctcgacga tcatggcgaa ggcggcgcgg gcgcccgaca
      241 cgaattcggc catcgagaag gacgggtcgg cggcgcggat cgcggcgacg ccctcgccca
      301 ccggcccttc cggaagaggt tcggcggcgg gcttgcgggc cgacgccaga tcgatcacgt
      361 tgtcggaagg cttgctcgcc cccgtccaat cggtcggcgg gcgctcgttg ccggtacggc
      421 ggcccagcat gctgcgcagg cgcagcacca ggaaggcggc caccatggcg aagaagagga
      481 tgtcgaagaa gggcaaaccg tcgttcatgc tggtcccaga ccggcggccg tccccgcatt
      541 tccgcgcgga aggccgggaa aatcgagtgt aggacaacag ataagccggt ggaggggaag
      601 aagcaagcat gccttggctg atcgtggccg cgttgatcgc ggtgccggtg atcgaaatcg
      661 ccctgttcat caagtcggcc caatggatcg gcatcgtcca gaccatcctt gtggccatcg
      721 gtgccggcat gttgggcatc tatctggtca agcgccaggg gatcggcacc atgctgcgcg
      781 cccgcgccat gctggatcgc ggcgaggtgc cggtggccga ggcgttcgac ggcctgtgcc
      841 tggcggtggc gggcgtgctg ctgttcctgc ccggcttcgc caccgatttc gtggcgctgg
      901 cgctgctgtt gccgccggtg cgggcggcgc tgcggctgtg gctgggtcgc cacgtccacg
      961 ccgtggtgcg atccggccag ccgccccagc cgcaaggccc gccggtgatc gagacggact
     1021 accgggtggt caaggacgac gacgaacccc gcccctgatt cctatggacg gccggaaagt
     1081 tgtactgcgg acgattccat gctagccaat ccgtccgttc caggaggaca ccagaatgac
     1141 cgacaccgcc gaaaccgccc tgccgccgtt ggtcgtcaac ggccagtaca tcaaggacct
     1201 gtcgttcgag gtcccgggcg cccccgccat ctatggcgag atgagcggcc agaaccccga
     1261 catccccatc catgtggaca tcaacgccac ccccctgaag gacaacgtgt tcgaggtggt
     1321 gctgcacctg aaggtcgagg ccaagctggc cgaccgcccg gtgttcatcg ccgagttggc
     1381 ctatggcggt gtgttcacca tcaacgtgcc gcaggagcac gcgcaggcca tgctgctgat
     1441 cgagtgcccg cgcatgctgt tcccgttcgc gcgcaacatc atcgccgaca tgacccgcga
     1501 cggcggcttc ccgccgctga tgatccagcc gatcgacttc gtgcagctct atcgctcgcg
     1561 cctggatgcc atgagccagg aagcggccgg caacgcgtaa agggcgcgag gcgtgcgtga
     1621 aagatccttc ggcttcgcct caggatgaca agatcgttgt caccctgagc ggagcgaaag
     1681 gtctttcagg caggatttat gaggatcacc ccgccttcgc ctcggcttcc ggctcgcgca
     1741 gccagatcgc cttcttgagc ttgccgacga aggcggcgtg cgcctccagc tcctcgggag
     1801 tgggggcgtg cgggcgcggc ggccgggcct cgcgcaccac cgcgaccttg gcccccgtgt
     1861 cggacttgcc cgacaggcct agctcgaagc ccggctggcg gccgccgatc agctgcagat
     1921 agacctcggc cagcaattcc gaatccagca gcgcgccgtg atgggtgcgg tgggtgttgt
     1981 cgatctcgaa gcggcggcac agggcgtcca ggttggcctg ggcgccgggg aatttcttgc
     2041 gcgccatgat gacggtgtcg atggaccggc tcatgggcat ggccgggaaa cccagccgcg
     2101 tcatttccgc gttcaggaac cgcatgtcga attcggcgtt gtggatcacc agcggatcgt
     2161 cgccgatgaa ggcgaggaaa tccgccacca cctcggcgaa gaccggcttg tcggccagga
     2221 attcgttgga caggccgtgg accttgaagg cctcgtccgg catgtcgcgc tcgggattga
     2281 tgtagacgtg gaacacctgg ccggtgggca ggtggttgag cagctcgacg cagccgattt
     2341 ccacgatgcg gtggccggcc aggggatcga agccggtggt ttcggtatcg aggacgatct
     2401 cgcgcatgga tcctgtcggc gtgggctagt cggaattgcg catcagtgtg acgaccgccc
     2461 gcagccgacg caaggccggt cgcatgccca gtccggtggg gatgacgaaa tcggcgcggc
     2521 ggcgcttttc cccatccgcc atctgctgcg agcggatggc cgccagccgg gcgggcgtca
     2581 tgccgggtcg cttcagcacc cgctgcgcct gcaggaaagc cggcgcggtg accaccgcca
     2641 ccttgtcgca acgccgctcg ccgccggtct cgaacagcag gggaatgtcg agcaccacca
     2701 gcctggtgcg gcggcggcga tggcgttcca ggaaggcgcg ctcggcctgg cgcaccagcg
     2761 gatgcaggat ggcctccagc cgacgcaact ggtcgggccg gccgaacacg cgccggccca
     2821 gctcggcccg gtccaccgcg ccttccttca ccacaccggg aaacgccgcc tcgaccatgg
     2881 cgacggcggc accaccctgg gccatcaagg catgaacggt ggcgtcggcg tcatgcaccg
     2941 gcacgcccat ccgccgcagc atgcgggcgg cggtgctttt gcccatgccg atggagccgg
     3001 tgagaccgag gatcttcatg acgcgtccgt catcccgggc gagcatcgcg agacccggga
     3061 tccatggatg tgcaccacga tggaccccgg ctcgcgctgc gcttggccgg ggtgacgatc
     3121 catttccctt gccaccatca tggcaaatca atggccaagc acgaagtcgc gcagttccgc
     3181 cgtcacctcc ggccgcattc cgaaccacgc ttcgaagccc ggcaccgcct ggtacagcag
     3241 catgccgatg ccgtcgacca cggtgttgcc gcgcgccctg gcggccttca gcaggtcggt
     3301 gtccagcggc gcgtagacga tgtcgttgac cacggcgtcg gccggcaggg cggtgaggtc
     3361 caggtccagc ggcggctggc cggtcatgcc cagggtggtg gtgttgacca ccagggcggc
     3421 gccgtcgagg gcggcggcgc ggcggtccca gccctcggtg cggaaattgc cgccgatgtc
     3481 cttggccagg tgttcggccc ggtcggtcga gcggttgacc acgcggatct cgggcacgcc
     3541 ggcatccacc agggcggcgg ccaccgctcg ggcggcgccg ccggcgccca gaaccaccgc
     3601 cgggcccgaa tcgggccgcc aggcgggagc gccgcggcgc aggttttcga ggaatccgaa
     3661 ggcgtcggtg ttgcggccct cgatggtgcc gtcatccttc accaccaggg tgttgacggc
     3721 gccgacgcgc tcggccagc
//
LOCUS       DATIKR010000548         2435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_141654, whole genome shotgun sequence.
ACCESSION   DATIKR010000548 DATIKR010000000
VERSION     DATIKR010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141654"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VLL76_08475"
     CDS             <1..190
                     /locus_tag="VLL76_08475"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSV29581.1"
                     /translation="ATHPRVGDAMRDRLRRALLDMAADPDGRDMLARIPIGGLAPAAQ
                     ADYPPRDGWGVPWIEGKE"
     gene            complement(192..428)
                     /locus_tag="VLL76_08480"
     CDS             complement(192..428)
                     /locus_tag="VLL76_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSV29582.1"
                     /translation="MPLYSYRCKGCDHQFETLVMGADTPSCPSCGGGELERLLSVTNA
                     PNDKIGEIKSLARRQAAREGHFSNYSRSETKGKL"
     gene            564..2186
                     /locus_tag="VLL76_08485"
     CDS             564..2186
                     /locus_tag="VLL76_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29583.1"
                     /translation="MASNTRQRGAAVRWAPWVLAALFTALAGLGLAGFDSSERLRWEG
                     SERARIGVQLDILRSRLEASLNAPLLRTRGIAAHIVAQGDITQRQFDVMAEFLLRGHR
                     NVRNMVVSRGMVIAMTYPLAGNESVLGVDYRSVPAQYAMVQKAIQTRAPVLQGPVPLI
                     QGGTGLIARFPVFLPGPDGGEDDGPFFGMVNIILDIPGILAEAGVTRDDLPITVAIRG
                     RDGLGERGAVIHGEEAVFGQNPVQADVQLPFGSWRLAAIPKGGWDAVDDELERTRLLL
                     GLIFVLVGLAAFGTARYVTTLARTEQELVAKTVELERSNSDLERFAYVASHDLQTPLR
                     NVASYTQLLERRYRGRLDADADEFIGYIVDAARRMSQMVTDLLNYARVTAEGAAVVSV
                     PAQEALDVALTDLATDIRASGARVMVGDLPVVLAAPVQLTSVFQNLIGNAIKYRHPDR
                     APEIVVSAVRPSDGMVVFSVTDNGIGIEPQYSQQIFEFFQRLHPPGADQGSGVGLAVC
                     RRIVRRFGGDIWVESVPGEGATFRFTCPAAED"
     gene            2331..>2435
                     /locus_tag="VLL76_08490"
     CDS             2331..>2435
                     /locus_tag="VLL76_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HSV29584.1"
                     /translation="MTKVLLVGCGKMGSAMLAGWLDRGLAPADVVVVDP"
BASE COUNT          367 a          825 c          830 g          413 t
ORIGIN      
        1 cgccacccat ccccgcgtcg gcgacgcaat gcgcgaccgc ctgcgccggg ccttgctgga
       61 catggcggcc gatcccgatg gccgcgacat gctggcccgc attcccatcg gcggcctggc
      121 accggccgcc caggcggatt acccgccgcg cgacggctgg ggcgtgccct ggatcgaggg
      181 caaggagtga gtcagagctt tcccttggtc tcggaccggc tgtaattgct gaaatgcccc
      241 tcgcgggcgg cctggcggcg ggccagcgac ttgatctcgc cgatcttgtc gttgggtgcg
      301 ttcgtcaccg acagcaggcg ctccagttcc ccgccgccgc aggatggaca ggacggggtg
      361 tccgctccca tcaccaacgt ctcgaactgg tggtcgcagc ccttgcagcg ataggaatac
      421 agcggcatcg cccctccgtg tccagaaaat gcgcaagcat caaaattgca caataatata
      481 gcattttgcg gcgcgcgacg ggaagcgttg tgtcatcccc ggcaaggcga tagcatcggc
      541 gcgggcagag ggggggacat tgaatggcga gcaacacgcg ccagaggggc gccgccgtgc
      601 gctgggcgcc gtgggtgctg gcggcgctgt tcaccgccct ggccggcctg gggctggctg
      661 gattcgattc cagcgaaaga ttgcgctggg aaggcagtga gcgcgcccgc atcggggtcc
      721 agctcgacat cttgcggtcg cgcctggaag catcgctgaa cgcgccgctg ctgcgcacgc
      781 gcggcatcgc cgcccacatc gtcgcccagg gcgacatcac ccaacgccag ttcgacgtca
      841 tggccgagtt cctgctgcgc ggccaccgca acgtccgcaa catggtggtc agccgcggca
      901 tggtcatcgc catgacctat ccgctggccg gcaacgaaag cgtgctgggc gtcgattatc
      961 gctcggtccc ggcgcaatac gccatggtgc agaaggccat ccagacccgg gcgccggtgt
     1021 tgcaggggcc ggtgcccctg atccagggcg gcaccggcct gatcgcgcgc ttcccggtgt
     1081 tcctgccggg gcccgacggc ggcgaggacg acggcccgtt cttcggcatg gtcaacatca
     1141 tcctcgacat ccccggcatc ctggccgagg ccggggtgac gcgcgacgac ctgcccatca
     1201 cggtggcgat tcgcggacgt gacggcctgg gcgagcgcgg cgccgtgatc cacggcgaag
     1261 aggcggtgtt cggccagaac cccgttcagg ccgacgtgca attgccgttc ggaagctggc
     1321 ggttggccgc catccccaaa ggcggctggg acgcggtgga cgacgagttg gagcgcaccc
     1381 gcctgctgct gggcctgatc ttcgtgctgg tgggtttagc ggctttcggc accgcccgct
     1441 acgtcaccac cctggcccgc acggaacaag agctggtggc caagacggtg gaactggaac
     1501 gctcgaacag tgatctcgaa cgcttcgcct atgtggcctc gcacgacctg cagacgccgc
     1561 tgcgcaacgt cgccagctat acccaattgc ttgagcgccg ctatcgcggc cgcctggacg
     1621 ccgacgccga cgagttcatc ggctatatcg tcgatgccgc ccggcgcatg agccagatgg
     1681 tcaccgatct gctcaactac gcccgggtca ccgccgaggg cgccgccgtc gtctcggtgc
     1741 cggcccagga agccctcgac gtcgcgctga ccgacctcgc caccgacatc cgtgccagcg
     1801 gcgcccgcgt gatggtcggc gacctgccgg tcgtgctggc cgcgccggtg cagttgacca
     1861 gcgtcttcca gaacctgatt ggcaatgcca tcaagtaccg ccatcccgac cgggcgcccg
     1921 agatcgtggt ctcggcggtg cggcccagcg acggcatggt cgtgttctcg gtcaccgaca
     1981 acggcatcgg catcgagcct caatattccc agcagatctt cgagttcttc cagcgcctgc
     2041 atccgcccgg cgccgaccag ggctcgggcg tggggctggc ggtgtgccgc cgcatcgtgc
     2101 ggcgtttcgg cggcgacatc tgggtggaat cggtgccggg cgagggcgcg accttccgct
     2161 tcacctgccc ggcggctgag gattagaccc ctttccgggt gcctgccgct caggctttac
     2221 aacatcgtca tggccgggct gaacacttga cccgggggtc catatcgccg tttatcgtgg
     2281 ctgcccgggt cacgcccggg catgacgttt ttccggatgg gggttcgacc gtgacgaagg
     2341 ttctgttggt tggctgtggc aagatgggat ccgccatgct ggcgggctgg ctcgaccggg
     2401 gcctggcgcc ggccgacgtg gtggtggtcg atccc
//
LOCUS       DATIKR010000549         2549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_8123, whole genome shotgun sequence.
ACCESSION   DATIKR010000549 DATIKR010000000
VERSION     DATIKR010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8123"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VLL76_08495"
     CDS             <1..303
                     /locus_tag="VLL76_08495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HSV29585.1"
                     /translation="YLEVEGEMHGDAALSEEIRERIFPNSRLKGTANLLIMPNLDAAN
                     ISFNLLKVLGEGLSVGPILMGAAHPAHILTPSATVRNIVNVTALAAVDAQSTHRGA"
     gene            307..1695
                     /gene="mgtE"
                     /locus_tag="VLL76_08500"
     CDS             307..1695
                     /gene="mgtE"
                     /locus_tag="VLL76_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSV29586.1"
                     /translation="MENLEPRPTHLEIEDDLYGLDPEFVRAVEEALEQGRADDAGALA
                     EPLHYSDAADLLERLDSDNRAKLVEALRPHFDSEILTELDGSVRDEVIAALGFADLST
                     AIQELDSDDAVWLVSQLDADEREKVLASLPDDTRTMVAQGLSYPEYSAGRMMQRELVA
                     VPAYWTVGEAVDYLRASTALPEEFYDLYVVDPRHRPIGKIGLAKLVRGKRPMRLRELM
                     DDENMTVPVTADREEVAFLFRQHDLVSAPVVDGPGRLVGVITIDDVVDVIDEEAADDM
                     LRLAGVPDTDLYRAVKDTVRARVPWLLVNMCTAIFASSIIGLFEATIEKVVALAILMP
                     IVAGLGGNAGTQTLAVAVRGLATKELDFDNALRVIGKEVLVGVTNGIVIGCLIGPIAW
                     LWFDMPTIGAVIAAAIVFNLFLAGLAGSVIPLTLEKLGVDPAVASSIFLTMLTDSLGF
                     FAFLGLATLFLL"
     gene            1820..2503
                     /locus_tag="VLL76_08505"
     CDS             1820..2503
                     /locus_tag="VLL76_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HSV29587.1"
                     /translation="MTPAEILSRILYKDQDLIVLDKPAGLAVHAGPNSPDHLELYLPA
                     LSFGWAHPPRLAHRLDRDTSGCLILGRHDKSIKRLGRMFMHGTIRKTYWTVVVGGPEA
                     DAGVADMPMTKITGKGGWRIVVDPAGQPAVTEWEVKGRGDGLTWIECRPKTGRTHQIR
                     VHMKALGCPVLGDPYYGADPAPPMKLHLQSHAVAIPPLSQGKQWINVEAPPPEHMRAA
                     LKACGCAFD"
BASE COUNT          402 a          882 c          844 g          421 t
ORIGIN      
        1 tatctggagg tcgagggcga gatgcacggc gacgccgcgc tgtccgagga gatccgcgag
       61 cggattttcc cgaactcgcg attgaaaggt acggccaatc tgctcatcat gcccaacctc
      121 gacgccgcca acatctcctt caacctgctg aaggtgctgg gcgagggtct gtcggtgggc
      181 cccatcctga tgggcgccgc ccatccggct cacatcctca cgccctcggc gaccgtcagg
      241 aacatcgtca acgtcaccgc cttggcggcg gtggacgccc aatcgaccca caggggagcc
      301 tgacgtttgg agaacctcga accgcgcccc acgcatcttg agatcgagga cgacctttac
      361 ggtctcgatc ccgagttcgt gcgcgcggtc gaggaagcgt tggagcaggg ccgcgccgac
      421 gacgccggcg ccctggccga gccgctgcat tactccgacg ccgccgacct gctggaacgc
      481 ctggattccg acaaccgcgc caagctggtc gaggcgctgc ggccccattt cgattccgag
      541 atcctgaccg agctggacgg ctcggtgcgc gacgaggtca tcgccgcgct gggcttcgcc
      601 gacctgtcca ccgccatcca ggaactggat tcggacgacg ccgtgtggct ggtgtcgcag
      661 ttggacgcgg acgagcgcga gaaggtgctg gcgtcactgc ccgacgacac ccgcaccatg
      721 gtggcgcagg gcctgtccta tccggaatac tcggccggcc gcatgatgca gcgcgagctg
      781 gtggcggtgc cggcctattg gacggtgggc gaggccgtcg attacctgcg cgccagcacc
      841 gctttgcccg aggaattcta cgacctttac gtggtggacc cgcgccaccg ccccatcggc
      901 aagatcggcc tggccaagct ggtgcgcggc aagcgtccca tgcgcctgcg cgagctgatg
      961 gacgacgaga acatgaccgt tcccgtcacc gccgaccgcg aggaggtggc gttcctgttc
     1021 cgccagcacg atctggtgtc cgccccggtg gtggacggcc ccggccggct ggtgggcgtc
     1081 atcaccatcg acgacgtggt ggacgtcatc gacgaggaag cggccgacga catgctgcgc
     1141 ctggccggcg tgcccgacac cgacctctac cgcgccgtca aggacaccgt gcgggcgcgc
     1201 gtgccgtggc tgctggtcaa catgtgcacc gccattttcg cgtcgagcat catcggcctg
     1261 ttcgaggcga ccatcgagaa ggtggtagcc ctggcgatcc tgatgcccat cgtcgccggc
     1321 ctgggcggca acgccggcac ccagaccctg gcggtggccg tgcggggcct tgccaccaag
     1381 gaactggatt tcgacaacgc gttgcgcgtc atcggcaagg aagtgctggt gggcgtcacc
     1441 aacggcatcg tcatcggctg cctgatcggc cccatcgcct ggctgtggtt cgacatgccg
     1501 accatcggcg ccgtcatcgc cgccgccatc gtgttcaacc tgttcctggc cggcctggcc
     1561 gggtcggtga tcccgctgac gcttgaaaaa ctgggcgtcg atccggcggt ggcgagttcc
     1621 atcttcctga cgatgctgac ggacagcctt gggttcttcg ccttcctggg gctggcgacg
     1681 ctgttcttgt tgtgatggca ccccctcccg tcgtcatggc cgggcctgac ccggccatcc
     1741 acgtgccggc cacccggcct gcggatgcat ggacccccgg atcaagtccg ggggtgacgg
     1801 tcggagcagg cggccggcaa tgacccccgc cgaaatcctc tcccgcatcc tctacaagga
     1861 ccaggacctg atcgtgctgg acaagccggc ggggctggcc gtgcatgccg ggccgaattc
     1921 gcccgaccat ctggaactct atctgccggc attgtccttc ggctgggccc atccgccgcg
     1981 gctcgcccat cggctcgacc gcgacacctc gggctgcctg atcctggggc ggcacgacaa
     2041 gtcgatcaag cggctgggcc gcatgttcat gcacggcacc atcaggaaga cctattggac
     2101 ggtggtggtg ggcggccccg aggccgatgc cggcgtggcc gacatgccca tgaccaagat
     2161 caccggcaag ggcggctggc gcatcgtggt tgacccggcc ggccagccgg cggtcaccga
     2221 atgggaggtc aaggggcgcg gcgacggcct gacctggatc gaatgccgcc ccaagaccgg
     2281 ccgcacccac cagatccgcg tccacatgaa ggccttgggc tgccccgtgc tgggcgatcc
     2341 ctattacggc gccgacccgg ccccgcccat gaagctgcac ctgcaatccc acgcggtggc
     2401 gattccgccg ctgtcgcagg gcaagcagtg gatcaacgtg gaagcgccgc cgcccgagca
     2461 catgcgggca gccctgaagg cgtgcggctg cgctttcgac tgagccgttg caacctgcct
     2521 tcgcggccgg ctgttcactt ccgaaaggg
//
LOCUS       DATIKR010000550         1803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_189285, whole genome shotgun sequence.
ACCESSION   DATIKR010000550 DATIKR010000000
VERSION     DATIKR010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189285"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..734)
                     /gene="moaA"
                     /locus_tag="VLL76_08510"
     CDS             complement(<1..734)
                     /gene="moaA"
                     /locus_tag="VLL76_08510"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HSV29588.1"
                     /translation="MIDPFGRQVSYLRVSVTDRCDLRCTYCMAEDMTFLPKADVLSLE
                     ELERLCGAFVRRGVSKIRLTGGEPLVRRNVMSLIGRLGGMDGLEELTLTTNGTQLAKH
                     AEALYAAGIRRINVSLDTLNPAKFAAITRWGRIEQVLDGIKAAKAAGLRIKINTVALN
                     GINDDEHHELVAWCGQHGHDLTFIETMPMGEVVNRPEHYMALSDVRRALETRWTLAET
                     DYRTGGPARYVRVAETGGRIGFITPMT"
     gene            849..>1803
                     /locus_tag="VLL76_08515"
     CDS             849..>1803
                     /locus_tag="VLL76_08515"
                     /inference="COORDINATES: protein motif:HMM:NF022115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2478 domain-containing protein"
                     /protein_id="HSV29589.1"
                     /translation="MNPSLPAVPAIGAVVYPPDRQPEALLAAFAAELASRGFSLGGLV
                     QETHGKAMELVELDSGRRHNLTQPLGAGSQSCVLDLGAMADAAMAIRRAVESRADLVL
                     VNKFSKTEKAGGGFAAEMLAAMVEGVPMLTSVPGAYVEEWIDFTGGRGDLIMPDQRAL
                     WRWWGAHHVYDDLALAVPDVPAGRVVVGLNWTLVEGPHGIGLAQTPERGTGGCRALSE
                     LKDRSLRQLASLCRSWDPFEVAVGIAAANAHFNRFDLMAADTNGLDALKDPGRIVVVG
                     GFPGLAERLPGAAVIERDPGPGQYPEEACTWLLPAAESAVIT"
BASE COUNT          255 a          615 c          633 g          300 t
ORIGIN      
        1 gtcatgggcg tgatgaagcc gatgcggccg ccggtctcgg ccacccgcac atagcgggcc
       61 gggccgccgg tgcgatagtc ggtctcggcc agggtccagc gcgtctccag cgcccggcgc
      121 acgtcggaca gcgccatgta atgctcgggc cggttcacca cctcgcccat gggcatggtc
      181 tcgatgaagg tgaggtcgtg gccgtgctgg ccgcaccacg ccaccagctc gtgatgctcg
      241 tcgtcgttga tgccgttcag cgccacggtg ttgatcttga tcctgaggcc ggcggccttg
      301 gcggctttga tgccgtccag cacctgctcg atcctgcccc agcgggtgat ggcggcgaac
      361 ttggcggggt tcagggtgtc cagcgacacg ttgatgcggc ggatgccggc ggcgtacagg
      421 gcttcggcgt gcttcgccaa ctgggtgccg ttggtcgtca gcgtcaattc ctcgagcccg
      481 tccatgccgc ccagccgccc gatcaggctc atgacgttgc ggcgcaccag cggctcgccg
      541 cccgtcaggc ggatcttgga cacgcccctg cgcacgaagg cgccgcacag ccgctccaat
      601 tcctccagcg acagcacgtc ggccttgggc aggaaggtca tgtcctcggc catgcaatag
      661 gtgcagcgca ggtcgcagcg gtcggtgacc gacacgcgca gatagctcac ctggcggccg
      721 aacggatcga tcatcacaca ctccacgggg cgctggttac catcatatat agcggcgggc
      781 gaggaaacga gtcttgcctt tggtcaaggt cgggctactc tcccgtcgaa cccacaggga
      841 ttggcgccat gaacccgtcg cttcccgccg ttccggccat cggcgcggtg gtctatccgc
      901 ccgatcggca gcccgaggcg ttgcttgccg ccttcgccgc cgagctggcg tcgcgcggct
      961 tctcgctggg cgggctggtg caggagaccc acggcaaggc catggagctg gtcgagctgg
     1021 acagcggccg acgccataat ctgacccagc cgttgggcgc cggctcgcaa tcctgcgtgc
     1081 tggatctggg cgccatggcc gacgccgcca tggccatccg ccgcgccgtg gaaagccgcg
     1141 ccgatttggt gctggtcaac aagttctcga agacggaaaa ggccggcggc ggctttgccg
     1201 cggaaatgct ggcggccatg gtcgagggcg tgcccatgct gaccagcgtg cccggcgcct
     1261 atgtcgagga atggatcgac ttcaccggcg ggcgcggcga cctgatcatg cccgaccagc
     1321 gcgctttgtg gcggtggtgg ggggcgcacc acgtctacga cgatttggcg ctggcggtgc
     1381 ccgacgtgcc ggccggccgc gtggtggtgg ggctgaactg gacgctggtg gaaggcccgc
     1441 acggcatcgg cctggcccag acccccgagc gcggcaccgg cggctgccgg gcgctgagcg
     1501 agttgaagga tcgctcgctg cgccaactgg cgtcgctgtg ccggtcgtgg gacccgttcg
     1561 aggtcgctgt cggcatcgcc gccgccaacg cccatttcaa ccgcttcgac ctgatggcgg
     1621 ccgataccaa cggcctcgac gcgctgaaag accccggccg catcgtggtg gtgggcggct
     1681 ttcccggcct ggccgagcgc ctgcccggcg ccgccgtgat cgagcgcgat cccggccccg
     1741 gccagtatcc cgaggaggcc tgcacctggc tgctgccggc ggcggaatcg gcggtcatca
     1801 cct
//
LOCUS       DATIKR010000551         2981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_165313, whole genome shotgun sequence.
ACCESSION   DATIKR010000551 DATIKR010000000
VERSION     DATIKR010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165313"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..387
                     /locus_tag="VLL76_08520"
     CDS             106..387
                     /locus_tag="VLL76_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29590.1"
                     /translation="MKKFLIAAALSVLVAAPAMAQVNSQITDAVTKAATDAATKAATD
                     TVTKAVGGETDAKAAKKDKKAKKDNSPNYGQSEEHRQDGDHGHKVKKKK"
     gene            472..825
                     /locus_tag="VLL76_08525"
     CDS             472..825
                     /locus_tag="VLL76_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29591.1"
                     /translation="MYVSFAVSAPYLETRVKPELVFALQPDPTTTADDTELLVDSDRT
                     ILVNEPLGQVATKMGGDFRQFEQGSSTDTIWINRLLVVQILPHATMPGVCYVMGAHRR
                     VTVKGTLAAVTNILN"
     gene            895..2067
                     /locus_tag="VLL76_08530"
     CDS             895..2067
                     /locus_tag="VLL76_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV29592.1"
                     /translation="MKMKGMLAAAAVAVMAAAPAFAQQAEVKVGLITTLSGPGSSLGV
                     DVRDAFNLAVKELGGTLGGLKAVVVEGDDQQKPEVAKELATRMVEKDKVHFGTGIIFS
                     NLMLATMPTFARGEAYYVSANAGPSQLAGKQCNPYFFSASYQNDGQHEAMGHYVQAKG
                     FKNVYLMAPNYPAGKDAINGFKRFYAGAVAGEVYTTVNQLDYAAELAALRAAKPDAVF
                     VFYPGGMGINFVKQWEQGGLKGQVPLFGPGFTFSEDTLPAMGDAALGILNTAQWSPDL
                     DNAENRKFVESFAAAYGRLPSVYASQAYDAAKLIDAAIKKAGGKLDDKAALGKGLMAA
                     EFKSVRGPFKFNKNHFPIQDYYLREVVKDAKGRYLNKLKAPVFRDHADAYVGECGM"
     gene            2172..>2981
                     /locus_tag="VLL76_08535"
     CDS             2172..>2981
                     /locus_tag="VLL76_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV29593.1"
                     /translation="MTALLLFEQGLNGLQLGVMLFLMAAGLTLVFGIMDLIHLSHGSF
                     YMVGAYLTATFTRQFDSFFVGIALALPAAALVGMAVEAVAIRRLYARDHLDQVLATFG
                     LILFFNEAVRMIWGSQPIFLTPPPALAGTIEIVPGMPYPAFRLAILGVGVAVALFLLA
                     LIRHTRLGMLVRAGASNRAMAGALGIDTDRLFTLVFGLGAALAALAGGMAGPVLAVQV
                     GMGESILILTFVVVVIGGIGSIKGALVGALLVGLVDTLARTALPALLRALMG"
BASE COUNT          502 a          995 c          973 g          511 t
ORIGIN      
        1 tcgaagccgc cttggcgggg tgatcgcaaa ggggccctgc ggggcccctt cttttttggc
       61 ctggaagcgc tacagtgggc gccattcaac cgctgggagc gccccatgaa gaagtttctg
      121 atcgccgccg ccctgtccgt cctggtcgcc gccccggcga tggcccaggt caacagccag
      181 atcaccgacg ccgtgaccaa ggccgccacc gacgccgcca ccaaggccgc gaccgatacg
      241 gtgaccaagg ccgtcggtgg cgagaccgat gccaaggccg ccaagaagga caagaaggcg
      301 aagaaggaca acagccccaa ttacggccag tcggaagagc accgccagga cggcgaccac
      361 ggccacaagg tcaagaagaa gaagtagtag tcggcggggc gcggcatacg accttgacaa
      421 cccaggttcg aaaggaccta caatcctggg ttcaaaaggg gaggatccgt catgtacgtt
      481 tcgttcgccg tctccgcgcc ctaccttgaa acccgcgtca agcccgagct ggtcttcgcc
      541 ctccagcccg accccacgac cactgcggac gacaccgaat tgctggtgga ttccgaccgg
      601 acgatcctgg tgaacgagcc gctgggccag gtggcgacca agatgggcgg cgatttccgg
      661 cagttcgagc agggttcgtc caccgacacc atctggatca accgcttgct ggtggtccag
      721 atcctgccgc atgccaccat gccgggcgtg tgctatgtga tgggcgccca ccgccgcgtc
      781 accgtcaagg ggacgctggc cgcggtcacc aacatcctga actgattccg ctgttgtatt
      841 gatctccggc cccgctaatc tcggcccatt ggatttgtca cccagggggt ccggatgaag
      901 atgaagggta tgctggcggc ggcggccgtc gccgtgatgg ctgccgcgcc ggctttcgcg
      961 cagcaggccg aggtcaaggt cggcctgatc accacgctgt ccggcccggg ctcgtccctg
     1021 ggcgtcgatg tgcgcgacgc cttcaatctg gcggtcaagg agctgggcgg cacgctcggc
     1081 ggcctcaagg ccgtggtggt cgaaggcgac gaccagcaga agccggaagt cgccaaggaa
     1141 ctcgccaccc gcatggtcga gaaggacaag gtgcatttcg gcaccggcat catcttctcg
     1201 aacctgatgc tggcgaccat gccgaccttc gcgcgcggcg aggcctatta cgtgtcggcc
     1261 aatgccggcc cgtcgcaatt ggccggcaag cagtgcaatc cctacttctt ctcggcgtcg
     1321 taccagaatg acggccagca cgaggccatg ggccattacg tccaggccaa ggggttcaag
     1381 aacgtttatc tgatggcccc caactacccc gccggcaagg atgccatcaa cggcttcaag
     1441 cgcttctacg ccggcgccgt ggcgggcgag gtctacacca ccgtcaacca gctcgactat
     1501 gccgccgaac tggccgccct gcgcgccgcc aagccggacg cagtgttcgt gttctatccc
     1561 ggcggcatgg gcatcaattt cgtcaagcag tgggagcagg gcggcctcaa gggccaggtt
     1621 ccgctgttcg gccccggctt caccttctcg gaagacacgc tgccggccat gggcgacgcc
     1681 gccttgggca tcctcaacac ggcgcagtgg agccccgacc tcgacaatgc cgagaacagg
     1741 aagttcgtgg aaagcttcgc cgccgcctat ggccgcctgc ccagcgtcta tgccagccag
     1801 gcctatgacg ccgccaagct gatcgacgcg gccatcaaga aggcgggcgg caagctcgac
     1861 gacaaggcgg ccctgggcaa gggcctgatg gccgccgagt tcaagtcggt gcgcgggccg
     1921 ttcaagttca acaagaacca cttcccgatc caggattatt acctgcgcga agtggtgaag
     1981 gacgccaagg gccgttacct gaacaagctc aaggcccccg tcttccgcga ccacgccgac
     2041 gcctatgtcg gcgagtgcgg gatgtaggtc gtcaccccgg ccaagcgtag cgcgagccgg
     2101 ggtccatggc gggtgcacca accatggatc ccgggtctcg cgatgctcgc ccgggatgac
     2161 ggttacactc catgaccgct ctcctgctgt tcgaacaggg cctcaacggg ctgcaactcg
     2221 gcgtcatgct gttcctgatg gcggccgggc tgacgctggt gttcggcatc atggacttga
     2281 tccacctgtc gcacggctcg ttctacatgg tcggcgccta cctgacggcg accttcaccc
     2341 gccagttcga cagcttcttc gtcggcatcg cgctggcgct gccggccgcc gccctggtgg
     2401 gcatggcggt cgaggcggtg gcgatccggc ggctgtatgc ccgcgatcat ctcgaccagg
     2461 tgctggcgac cttcggcctg atcctgttct tcaacgaagc ggtgcgcatg atctggggca
     2521 gccagcccat cttcctgacg ccgccgcccg ccttggccgg cacaatcgag atcgtgccgg
     2581 gcatgcccta tcccgccttc cgcctcgcca tcctgggtgt cggcgtggcg gtggctttgt
     2641 tcctgctggc gctgatccgt cacacccgcc tgggcatgct ggtgcgcgcc ggtgccagca
     2701 accgcgccat ggccggcgcc ctgggcatcg acaccgaccg cctgttcact ttggtgttcg
     2761 gcctgggcgc ggcgctggcg gccctggccg gcggcatggc cgggccggtg ctggcggtgc
     2821 aggtgggcat gggcgaaagc atcctgatcc tgaccttcgt ggtggtggtg atcggcggca
     2881 tcggttcgat caagggggcg ctggtcggcg ccctgctggt ggggctggtg gacactttgg
     2941 cgcgcaccgc gctgccggcg ctgctgcggg ccctgatggg g
//
LOCUS       DATIKR010000552         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_116976, whole genome shotgun sequence.
ACCESSION   DATIKR010000552 DATIKR010000000
VERSION     DATIKR010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116976"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="VLL76_08540"
     CDS             complement(<1..808)
                     /locus_tag="VLL76_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29594.1"
                     /translation="MVALAIRPPRDQDKAGRPPAIRLEGVVKQFGDVSAVAGVDLEIE
                     EGEFFSLLGASGCGKTTLLRMLAGFEQPTGGRIVIAGQDMTGVPAYERPVNMMFQSYA
                     LFPHMTVADNVAFGLKQDGLPKAEIKDRVAAMLDMVAMGKFAGRKPHQLSGGQRQRVA
                     LARCLVKQPKVVLLDEPLAALDKKLREQTQFELVNIQEKVGITFVMVTHDQEEAMTMS
                     SRIAVMDAGRIMQVGRPHEIYEYPTSRMVAEFIGTANLFEGVVDSVENGLV"
     gene            complement(817..1917)
                     /locus_tag="VLL76_08545"
     CDS             complement(817..1917)
                     /locus_tag="VLL76_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV29595.1"
                     /translation="MLARLTRFAAAALVGLAATAANAEDKVVNVYNWSDYIAKDTLEK
                     FTKETGIKVNYDTYGENEVLDAKLMAGKSGYDVVFPSASPFFAQQVKAGIYQKLDLPK
                     LPNAKGLDASTMKNLQSVDPGNAFGVPYMRAATGIGFNVDAVKKFAPEAATDSWGLLF
                     NPEVVSKLKACGVAMLDTPTEAVPAMLAYQGKNPVEQSPESLTAAMDALTALRPNYRY
                     IHSEKYRNDLAGGDICVAQGYVGDLVQVRERASKAKKKQNIAIVIPKEGALVNIDMMA
                     IPAAAPHPDAAHAFINFILRPEIIAEITNETGYANMVPASAPMVDEALRTDTVIFPPA
                     DVQAKLFTPPPASKDYDRARARAWSKFRAAKK"
BASE COUNT          315 a          639 c          704 g          377 t
ORIGIN      
        1 tgaccaggcc gttctcgacc gagtccacca cgccctcgaa caggttggcg gtgccgatga
       61 attcggcgac catccggctg gtgggatatt cgtagatctc gtgggggcgg ccgacctgca
      121 tgatgcggcc ggcatccatc accgcgatgc gcgacgacat ggtcatcgcc tcttcctggt
      181 cgtgggtgac catgacgaag gtgatgccga ccttttcctg gatgttgacc agctcgaact
      241 gggtctgctc gcgcagcttc ttgtcgagag ccgccagcgg ttcgtccagc agcaccacct
      301 tgggctgctt gaccaggcag cgggccaaag ccacgcgctg gcgctggccg cccgacaatt
      361 ggtgcggctt gcgcccggcg aacttgccca tggcgaccat gtccagcatg gcggccacgc
      421 ggtccttgat ctcggccttg ggcaagccgt cctgcttcag cccgaacgcc acgttgtcgg
      481 cgacggtcat gtgcgggaac agggcatagg actggaacat catgttgacg gggcgctcat
      541 aggcaggcac cccggtcatg tcctggccgg cgatgacgat gcgtccgccg gtgggttgct
      601 cgaaccccgc cagcatgcgc agcagcgtcg tcttgccgca gcccgaagca ccgaggaggg
      661 agaagaactc cccctcctcg atttcgaggt cgacgccggc gacggcactc acgtcgccga
      721 attgcttgac caccccttcg agccggatgg ccgggggacg cccggccttg tcctgatcgc
      781 ggggtggacg gatcgccagc gccaccatga ttccccttac ttcttggcgg cgcggaactt
      841 cgaccacgcg cgggcacggg cgcggtcgta gtccttggac gccggcggag gagtgaacag
      901 cttcgcctgc acgtcggcgg gcgggaagat caccgtgtcg gtgcgcagcg cctcgtccac
      961 catgggggcc gaggccggca ccatgttggc gtagccggtc tcgttggtga tctcggcgat
     1021 gatctcgggg cgcaggatga agttgatgaa ggcgtgcgcc gcatcgggat gcggggcggc
     1081 ggccgggatc gccatcatgt cgatgttgac cagggcgcct tccttgggga tgacgatggc
     1141 gatgttctgc ttcttcttgg ccttggaggc gcgctcgcgc acctgcacca ggtcgccgac
     1201 ataaccctgg gcgacgcaga tgtcgccgcc ggccaggtcg ttgcggtact tctcggagtg
     1261 gatgtagcga tagttcgggc gcagagcggt cagcgcgtcc atggcggcgg tcagcgactc
     1321 gggcgactgc tcaaccgggt tcttgccctg ataggccagc atggccggca ccgcctcggt
     1381 cggcgtgtcg agcatggcga cgccgcaggc cttgagcttg gacaccactt ccggattgaa
     1441 cagcaggccc cagctgtcgg tggcggcctc gggggcgaac ttcttcaccg cgtcgacgtt
     1501 gaagccgatg ccggtggcgg cgcgcatgta ggggacgccg aacgcgttgc cgggatcgac
     1561 cgactgcagg ttcttcatgg tcgaggcgtc aaggcccttg gcattgggca gcttgggcag
     1621 gtccagcttc tggtagatgc cggccttgac ctgctgggcg aagaacggcg acgccgacgg
     1681 gaacaccacg tcatagcccg acttgcccgc catcagcttg gcgtccagca cctcgttctc
     1741 gccgtaggtg tcgtagttga ccttgatgcc ggtctccttg gtgaacttct ccaaggtgtc
     1801 cttggcgatg tagtccgacc agttgtagac gttgacgacc ttgtcctcgg cattggccgc
     1861 ggtggccgcc aggccgacca gcgcggcggc ggcgaaacgg gtaaggcgag cgagcatcgg
     1921 gcagtccccc aaatcgttgg ataggctttg gacggcggcc ctctcttttc cccgcgtcca
     1981 cgcgcgggta tgccgactcg gggggccgga gtcaacaagt cagagacggg gcggg
//
LOCUS       DATIKR010000553         7896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_237912, whole genome shotgun sequence.
ACCESSION   DATIKR010000553 DATIKR010000000
VERSION     DATIKR010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 7896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7896
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237912"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VLL76_08550"
     CDS             <1..245
                     /locus_tag="VLL76_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29596.1"
                     /translation="DSKALVLTLASELAEPPLALAPFSPELRPDGRMVIHYKPSAMPI
                     AGILEAVRQAGLSIVDLSTEETDLEDIFLQLTSSKV"
     gene            245..1225
                     /locus_tag="VLL76_08555"
     CDS             245..1225
                     /locus_tag="VLL76_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase"
                     /protein_id="HSV29597.1"
                     /translation="MRALLVVFLAFTLSACAAQFHLPGPPVTSAELNHDHWITSDGAK
                     LPIRAWLPAGQPKAVILALHGMNDYSNFFDDPGQYFASRGIAAYAYDQRGFGQAPHRG
                     LWSSGEAMAADLRIAATLVAARHPGVPLYILGESMGGAVTMLAVAGEPPPQVHGIILS
                     APAVWGRSTMGFFQRAALWLTYQIAPGMTLTGEGLKIVPSDNVEMLRKLSADPLVIKG
                     TRVDTIHGMVDLMDDAARAAPHVRVPALVLYGAKDEIIPAEPTWRVVRAMPATGSSQR
                     VAYYRNGYHMLLRDLGAKSVLDDILAWVADPAAPLPSGADAEARAQLMGR"
     gene            1298..1552
                     /locus_tag="VLL76_08560"
     CDS             1298..1552
                     /locus_tag="VLL76_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29598.1"
                     /translation="MDLDLPALLDEKKRLDDLLDEALDKFALYEEDFNNRLKHVHEDQ
                     RMAMYAERNQVEEALGIADLVMRLDELRELIAAARGVPAS"
     gene            complement(1549..1995)
                     /locus_tag="VLL76_08565"
     CDS             complement(1549..1995)
                     /locus_tag="VLL76_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29599.1"
                     /translation="MRFVMAAVMLLAAGPALASDWPKGRTEAHDTRLGTHPNLTRLVL
                     DVSELSKFYSHTTDGGRRILVGIPSVDWEANRHRLKPYGIIERFDFMRRGLKRGLLVI
                     HTTRPARIEYQFTLPPDPKDRKGNRLVLDLVPAETPGKVPIPKRKG"
     gene            2254..2565
                     /locus_tag="VLL76_08570"
     CDS             2254..2565
                     /locus_tag="VLL76_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HSV29600.1"
                     /translation="MSDQTYERVVNHPKFAELTAKRNSFSLVLSLIVLGVYYTFVLVA
                     ALKPALFSAPVFEGVTWPMGLAAGFVIQMFAFAMTGVYVARANSEFDALNRTIIEEST
                     R"
     gene            2562..4226
                     /locus_tag="VLL76_08575"
     CDS             2562..4226
                     /locus_tag="VLL76_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006847 - plasma membrane acetate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HSV29601.1"
                     /translation="MSRLMGLIAALAALAPAAAFAAGGAIDGAVEKSATNHMAIIMFV
                     VFVIGTLGITYWASKRTRSASDFYTAGGGITGFQNGLAIAGDYMSAAAFLGVSGMVFA
                     KGVDGVFYTAGWTVGWPLILFMIAERLRNLGKFTFADVASYRLSQTPIRSLAATGALA
                     VVVFYLIAQMVGAGKLIQLLFGLEYAYAVVLVGVLMMAYVTFGGMLATTWVQIIKACL
                     LLGGCTILVVLGMVQFGFNPETVMSQAVANHKAGAKILAPSSSISDPITAISLSLALM
                     CGPAGLPHILMRFFTVPDAKAARKSVFYATGFIGYFFILAVMIGFLAITIVGTNPAYL
                     DAKGGIFGGGNMAAIHLSKAVGGDVFLGFISAVAFATILAVVSGLALAGASAVSHDLY
                     ARVFKKGHATEREEMLVGRIAVLTLGVIAIVLGLLFENQNIAFMVSLAFGLAASVNFP
                     VLFLSIFWSGLTTRGAFIGGFLGLLSAVACVVLGPAVWVQVLKNPAPIFPYEHYALFS
                     MTIAFVSIWFFSIIDKSERAKQDKEAFRFQRVRSETGLGAEAPVAH"
     gene            complement(4282..4818)
                     /locus_tag="VLL76_08580"
     CDS             complement(4282..4818)
                     /locus_tag="VLL76_08580"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSV29602.1"
                     /translation="MAAAAADELAAHREAVRGFLTRLLKDSGLAEDLAQESLIRATRA
                     ADGMRGEAAPRTWLIAVAFNLARDHFRRAGRQPRFSDLDAAADIAAAENPEHDVLKAE
                     MSSCILGHIDRLPARQRDAVLMHHFAGLTHAEIAAALAVTEGNARVLLHRGLAALRRS
                     LGQECTVSLGDDIPCERR"
     gene            complement(4799..5041)
                     /locus_tag="VLL76_08585"
     CDS             complement(4799..5041)
                     /locus_tag="VLL76_08585"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV29603.1"
                     /translation="MDERITELVAIGASAAVNCHPCLQHHLAECDRLGLDRADVAAAV
                     EVGMMVNRGAAAKTRTHAGEVLGTGAKEAGGGCGCG"
     gene            complement(5098..5433)
                     /locus_tag="VLL76_08590"
     CDS             complement(5098..5433)
                     /locus_tag="VLL76_08590"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HSV29604.1"
                     /translation="MSRYRLTRAADLDIESILRDSARMFGPIQQQVYASLLDAAARMV
                     AEQPDRPGSRDRKELGKGVRSFPVSLAANRSGAAAHVLFYLPDPDGATIVRVLHEAMD
                     PLLHLEAPV"
     gene            complement(5430..5687)
                     /locus_tag="VLL76_08595"
     CDS             complement(5430..5687)
                     /locus_tag="VLL76_08595"
                     /inference="COORDINATES: protein motif:HMM:TIGR02606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HSV29605.1"
                     /translation="MPTMNVSLSSEFVDFVDAEVASGDYGTASEVVRDALRLLRREKQ
                     ARDEKLAILRREVALGCRQAENGEFSERSVTDIAAAIRRDP"
     gene            complement(5740..7338)
                     /locus_tag="VLL76_08600"
     CDS             complement(5740..7338)
                     /locus_tag="VLL76_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007677174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HSV29606.1"
                     /translation="MTTRSEVRPRRRRWRLLASPLTRRILAVNLIAPVLLVVGLFYLD
                     NYKQGLIQAELAGLATQAEMVAGAVGEGAVAEQSLGLLEFNRELAQQMVRRLAEPAQV
                     RARLFDSVGELIADSRFLLYSKGVIQVEALPPPQARGWRAQLRYWWDRAATWMPVDET
                     LPVYAEQAQQRADHYPEVVAALSGRTDTAVRGRPAGGIMLSVAVPVQRYKQVVGSMMV
                     TADGTSVARALFRVRIAIVQVFAVTLLITIGMSLYMAGTIARPIRRLALAAEQVRHGH
                     GRHKMPDLSDRHDEIGELSTAFREMTEALWARMDAIEAFAADVAHEIKNPLTSLRSAV
                     ETAALVKDPERQRKLMAIIQDDVERLNRLITDISDASRLDAELSRAETEPVAIAAMVE
                     TLAEIYRSTTEDAVFTVSVPEAEPLTVAGIEGRLVQVLRNLIGNALSFSPAGGTIRLA
                     AEREGKFVRIEVEDDGPGIPDNKLAAIFDRFYTERPQSEKFGTHSGLGLSISKQIVDA
                     HGGLIWAENRKEGGARFVVKLPAA"
     gene            complement(7322..>7896)
                     /locus_tag="VLL76_08605"
     CDS             complement(7322..>7896)
                     /locus_tag="VLL76_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29607.1"
                     /translation="QSADLAVLDIKMPRMDGMELLQRLRKQSAIPVIFLTSKDDEVDE
                     LMGLRMGADDYIKKPFSQKLLIERIRTLLRRLDMANEPEAAATGQALVRGELVLDPAR
                     HICTWKGLKVDLTVTEFLILKSLAQRPGHVKNRDQLIDAAYGEHIYVDDRTIDSHIKR
                     LRKKFREVDDDFAQIETLYGVGYRYRDDPV"
BASE COUNT         1206 a         2661 c         2640 g         1389 t
ORIGIN      
        1 tggacagcaa ggcgctggtg ctgaccctgg cttcggagct tgccgagccg ccgctggcgc
       61 ttgccccatt ctcgcccgaa cttcgccccg atggccgcat ggtcatccat tacaagccgt
      121 cggccatgcc gatcgccggc atcctcgagg cggtgcgcca ggccggcttg tccatcgttg
      181 acctgtcgac cgaggaaacc gacctggagg atatcttcct gcagttgacc tcgtcgaagg
      241 tgtgatgcgc gcgcttctgg tcgttttcct ggctttcacc ctgtccgcct gcgccgcgca
      301 gttccacctg ccggggccgc cggtgacctc ggccgagctg aaccacgacc actggatcac
      361 ctcggacggc gccaaactgc cgatccgggc gtggctgccg gccgggcagc ccaaggcggt
      421 catcctggcg ctgcacggga tgaacgacta ttccaacttc ttcgacgacc cggggcagta
      481 tttcgcctcg cgcggcatcg ccgcctatgc ttacgaccag cgcggcttcg gccaggcgcc
      541 ccatcgcggg ctgtggtcgt cgggcgaggc catggctgcc gatttgcgca tcgccgccac
      601 cctggtggcg gcccgccatc caggcgtgcc gctctacatc ctgggcgaaa gcatgggcgg
      661 cgcggtcacc atgctggcgg tggcgggcga gccgccgccg caggtgcacg gcatcatcct
      721 gtcggcgccg gccgtgtggg ggcggtcgac catgggtttc ttccagcgcg cggcgctgtg
      781 gctgacctac cagatcgcgc cgggcatgac gctgaccggc gagggcctca agatcgtgcc
      841 gtccgacaac gtcgagatgc tgcgcaagct gtcggccgac ccgctggtga tcaaggggac
      901 ccgcgtcgat accatccacg gcatggtcga tctgatggac gacgcggccc gcgccgcgcc
      961 ccatgtcagg gtgccggcgc tggtgctgta cggcgccaag gacgagatca tcccggccga
     1021 gccgacctgg cgggtggtgc gggcgatgcc ggccaccggg tcgagccagc gcgtcgccta
     1081 ttaccgcaac ggctatcaca tgctgctgcg cgatttgggg gccaagtcgg tgctcgacga
     1141 catcctggcc tgggtcgccg acccggcggc gccgttgccc tcgggcgccg atgccgaggc
     1201 gcgggcacaa ctgatgggcc gatagggcgt aatcccattg cagggtttcg gcgctgcccc
     1261 cgtttgctat actcagatgg ggtatgggag ggcgccgatg gacctcgatc tgcctgcttt
     1321 gctggatgaa aagaaacgcc tcgacgacct gctcgacgag gcgctggaca agttcgcgct
     1381 ctacgaggaa gacttcaaca accggctgaa gcacgtccac gaagatcagc gcatggcgat
     1441 gtacgccgag cgcaaccagg tggaagaggc gctgggcatc gccgacttgg tgatgcgcct
     1501 ggatgaattg cgcgaactga tcgcggcggc gcgaggggtg ccagcctcct aacccttccg
     1561 cttgggtatc ggcaccttgc cgggggtctc ggccggcacc aggtcgagca ccagccggtt
     1621 gcccttgcgg tccttggggt cgggcggcag ggtgaactga tattcgatgc gggccggccg
     1681 ggtggtgtgg atcaccagca ggccgcgctt caatccccgc cgcatgaagt cgaaccgttc
     1741 gatgataccg tacggcttca gccgatggcg gttggcctcc cagtccacgc tggggatgcc
     1801 caccaggatg cggcggccgc catcggtcgt gtggctgtaa aatttcgaca attcgctgac
     1861 gtccagcacc aaccgggtca ggttgggatg ggtgcccaac cgggtgtcgt gggcctcggt
     1921 gcggcccttg ggccagtccg acgccagcgc cggccccgcc gccagcagca tcaccgccgc
     1981 catcacgaac cgcatgcgtc ccccccatcc cgctcgccgc caggatagcc gcgaccgcgt
     2041 tttctgtcat caccacccgt gcgggtagtg cggacgcgaa caggaaaatt gcggcggaaa
     2101 gtcagggttt gcgccttgtg ttgcgcggaa tggcgccctt tgcgcaactt cacgaaattt
     2161 aattatcctt ttcagaccca cccttttggg gtattggcgc aagcaaattt tgcagttgca
     2221 accaaaaccc aacagagagg gatcgcgacc gccatgtccg accaaaccta cgagagggtc
     2281 gtcaaccacc ccaaattcgc cgaactgacg gccaagcgga acagcttctc gctggtcctg
     2341 tcgctgatcg tgctcggcgt ctactacacc ttcgtgctgg tggcggcgct gaagcccgct
     2401 ttgttctcgg ccccggtgtt cgagggcgtg acgtggccca tgggtctggc ggcgggcttc
     2461 gtcatccaga tgttcgcctt cgccatgacc ggcgtttacg tcgcccgcgc caacagcgag
     2521 ttcgacgcgc tcaaccgcac catcatcgag gagtcgaccc gatgagccgc cttatgggcc
     2581 ttatcgccgc cctggccgcc ctggccccgg cggccgcctt cgccgccggc ggcgccatcg
     2641 acggcgccgt cgagaagtcg gcgaccaacc acatggcgat catcatgttc gtggtgttcg
     2701 tcatcggcac cctgggcatc acctattggg cgtcgaagcg cacccgctcg gccagcgact
     2761 tctacaccgc cggcggcggc atcaccggct tccagaacgg cctggccatc gccggcgact
     2821 acatgtcggc ggccgccttc ctgggcgtgt cgggcatggt gttcgcaaag ggcgtggacg
     2881 gcgtgttcta caccgccggc tggaccgtgg gttggccgct gatcctgttc atgatcgccg
     2941 agcgcctgcg caacctgggc aagttcacct tcgccgacgt ggcgtcgtac cgcctcagcc
     3001 agaccccgat ccgctcgctg gcggccaccg gcgccctggc cgtggtggtg ttctacctga
     3061 tcgcccagat ggtcggcgcc ggcaagttga tccagttgct gttcggcctg gaatacgctt
     3121 acgccgtcgt gctggtcggc gtgctgatga tggcctatgt caccttcggc ggcatgctcg
     3181 ccaccacctg ggtgcagatc atcaaggcct gcctgctgct gggcggctgc accatcctgg
     3241 tggtgctggg catggtgcag ttcggcttca atcccgagac cgtgatgagc caggccgtcg
     3301 ccaaccacaa ggccggcgcc aagatcctgg ccccgtcgtc gtccatctcg gacccgatca
     3361 ccgccatctc gctgtcgctg gcgctgatgt gcggcccggc cggcttgccc cacatcctga
     3421 tgcgcttctt caccgttccc gacgccaagg cggcgcgcaa gtcggtgttc tacgccaccg
     3481 gcttcatcgg ctacttcttc atcctggcgg tgatgatcgg cttcctcgcc atcaccatcg
     3541 tcggcaccaa cccggcctac ctggacgcca agggcggcat cttcggcggc ggcaacatgg
     3601 cggccatcca cctgtccaag gcggtgggcg gcgacgtctt cctgggcttc atctcggcgg
     3661 tcgccttcgc caccatcctg gcggtggtgt cgggcctggc cctggccggc gcctcggcgg
     3721 tgtcgcacga cctgtatgcc cgcgtgttca agaagggcca cgccaccgag cgcgaggaaa
     3781 tgctggtcgg ccgcatcgcc gtgctgacgc tgggcgtcat cgccatcgtg ctgggcctgc
     3841 tgttcgagaa ccagaacatc gccttcatgg tgtcgctggc cttcggcctg gccgcgtcgg
     3901 tgaactttcc ggtgctgttc ctgtccatct tctggagcgg cctgaccacc cgcggcgcct
     3961 tcatcggcgg cttcctcggc ctgctctcgg ccgtggcgtg cgtggtgctt ggcccggcgg
     4021 tgtgggtgca ggttctgaag aacccggccc ccatcttccc gtacgagcat tacgccctgt
     4081 tctcgatgac catcgccttc gtctcgatct ggttcttctc gatcatcgac aagagcgagc
     4141 gggccaagca ggacaaggaa gccttccgct tccagcgcgt ccgttcggaa accggcctcg
     4201 gcgccgaggc tccggtggcg cactgagtgc gctagcaacc aagaagcccc ccgtccgcaa
     4261 gggcgggggg ttttttgttg cctaacgccg ttcgcagggg atgtcgtccc ccaggctgac
     4321 ggtgcattcc tggcccaggc ttcggcgcag tgccgccaag ccgcggtgca gcagcacgcg
     4381 ggcgttgcct tcggttaccg ccagggcggc ggcgatctcg gcatgggtca agccggcgaa
     4441 atgatgcatc agcacggcat cccgctggcg cgccggcagg cggtcgatat ggcccaggat
     4501 gcagctcgac atttcggctt tcagcacgtc gtgctcgggg ttttcggccg ccgcgatgtc
     4561 ggcggctgcg tccaggtccg agaaccgagg ctggcgcccg gcccggcgga aatggtcgcg
     4621 cgccaggttg aaggcgacgg cgatcaacca ggtgcgcggc gccgcttcgc cacgcatgcc
     4681 gtccgccgcc cgggtggcgc ggatcagcga ctcctgggcc aggtcttcgg ccaggccgga
     4741 atccttcaac agccgggtga ggaagccgcg caccgcctcg cgatgcgcgg ccaactcgtc
     4801 agccgcagcc gcagccaccg ccggcctcct tggcgccggt gcccagcacc tcgcccgcat
     4861 gggtacgagt cttggccgca gcgccgcggt tgaccatcat cccgacctcg acggccgccg
     4921 ccacgtcggc gcgatccagg ccgagccggt cgcattcggc caagtgatgc tgcaagcagg
     4981 ggtggcagtt gacagccgcc gaggcgccga tggccaccag ttccgtgatg cgttcgtcca
     5041 tggaaagctc tcctcaaagg ttacgatacc cctttgacga tgccgccgtc gcggacgtta
     5101 cacgggagcc tcaaggtgga gtagagggtc catcgcttcg tggaggacgc ggacgatggt
     5161 tgctccgtcc gggtcgggca ggtaaaacag gacgtgggcg gccgcccccg accgattggc
     5221 ggccaagctg acgggaaatg accgcacgcc cttgccgagt tccttgcgat cacgcgagcc
     5281 gggtcgatcc ggttgttcgg cgaccatgcg ggcggccgcg tcaagcagcg acgcatagac
     5341 ttgctgctga atggggccga acatgcgggc gctgtcgcgc aggatggatt caatatccaa
     5401 gtcggccgcg cgggtaaggc gatagcggct cacgggtctc ggcggatcgc ggccgcgatg
     5461 tcggtcaccg accgctccga gaactcgccg ttctcggcct gacggcagcc cagcgcaacc
     5521 tcgcgccgca ggatcgccag cttttcgtcg cgggcctgct tttcccgccg cagcagccgc
     5581 agcgcgtcgc gcaccacctc ggacgcggtg ccgtaatcgc cagatgcgac ctcggcatcg
     5641 acgaaatcta cgaactcgga cgaaaggctg acgttcatgg tgggcatggc gaacctcctg
     5701 acccaaccaa ggttgggcaa ttggcaaatt ttgtcaatgc tacgcagccg gcagcttgac
     5761 cacgaagcgc gcgccgcctt ccttgcggtt ttcggcccag atcaggccgc catgggcatc
     5821 gacgatctgc ttgctgatgg acaggcccag gccggaatgg gtgccgaact tttccgattg
     5881 cgggcgctcg gtgtagaagc ggtcgaagat ggcggccagc ttgttgtcgg ggatgccggg
     5941 gccgtcgtcc tcgacctcga tgcggacgaa tttgccctcg cgctcggccg caaggcggat
     6001 ggtgccgccg gcggggctga aggacagggc gttgccgatc aggttgcgca gcacctgcac
     6061 cagccggccc tcgatgcctg ccaccgtcag gggctcggcc tcgggcaccg acacggtgaa
     6121 gaccgcgtcc tcggtggtgg agcggtagat ctcggccaag gtctcgacca tggcggcgat
     6181 ggcgaccggt tcggtctcgg cgcgcgacaa ttcggcgtcc agccgcgagg cgtccgagat
     6241 gtcggtgatc agccggttca gtcgctcgac atcgtcctgg atgatcgcca tcagcttgcg
     6301 ctggcgctcg gggtccttga ccagggcggc ggtctcgacc gccgaccgca agctggtcag
     6361 cgggttcttg atctcgtggg cgacgtcggc ggcgaaggcc tcgatggcgt ccatgcgcgc
     6421 ccacagggct tcggtcatct cacgaaaggc ggtggacagc tcgccgatct cgtcatggcg
     6481 gtcagacagg tcgggcatct tgtggcgacc gtggccgtgg cgaacctgct cggccgccag
     6541 cgccagccgg cggatggggc gggcgatggt gccggccatg tacagcgaca tgccgatggt
     6601 gatcagcagg gtgacggcga acacctggac gatggcgatg cgcacgcgga acagggcgcg
     6661 cgccaccgag gtgccgtcgg ccgtcaccat catcgagccg accacctgct tgtagcgctg
     6721 caccggcacc gccaccgaca gcatgatgcc gccggccggg cggccgcgca cggcggtatc
     6781 ggtgcggccg gacagggcgg ccaccacctc gggataatgg tcggcgcgct gctgcgcttg
     6841 ctcggcatag acgggaaggg tttcgtccac cggcatccag gtggcggcgc ggtcccacca
     6901 atagcgcaat tgggcccgcc agccccgcgc ctggggcggc ggcagggcct cgacctggat
     6961 cacgcccttg gagtaaagca ggaagcgcga atcggcgatc agctcgccca ccgaatcgaa
     7021 caggcgggcg cgcacctggg ccggctcggc caggcggcgc accatctgtt gcgccagttc
     7081 acggttgaat tccaacaggc ccagcgactg ttccgccacc gcgccttcgc cgaccgcgcc
     7141 ggccaccatc tcggcctggg tggcaaggcc cgccagctcg gcctggatca ggccctgctt
     7201 gtaattgtcg agatagaaca gcccgaccac cagcagcacg ggggcgatca ggttgaccgc
     7261 caggatgcgc cgggtcagcg gcgacgccag caggcgccag cgccgccgcc ggggccgcac
     7321 ctcagaccgg gtcgtcacga tagcggtagc cgacgccgta cagcgtctcg atctgggcga
     7381 agtcgtcgtc gacctcgcgg aacttcttgc gcagccgctt gatgtggctg tcgatggtgc
     7441 ggtcgtcgac gtagatgtgc tcgccatagg cggcgtcgat caactggtcg cggttcttga
     7501 cgtggccggg acgctgcgcc agcgacttca ggatcaggaa ttcggtgacg gtcaggtcga
     7561 ccttcagccc cttccaggtg cagatgtggc gcgccgggtc gagcaccagt tcgccgcgca
     7621 ccagcgcctg gccggtggcg gcggcctctg gttcgttggc catgtcgagg cggcgcagca
     7681 gggtgcggat gcgctcgatc aacagcttct gcgagaacgg cttcttgatg tagtcgtcgg
     7741 cgcccatgcg cagacccatc agctcgtcca cctcgtcgtc cttcgaggtc aggaagatca
     7801 ccgggatggc cgattgcttg cgcagccgct gcagcaattc catgccgtcc atgcgcggca
     7861 tcttgatgtc cagcaccgcc agatccgccg actggg
//
LOCUS       DATIKR010000554         2824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_56315, whole genome shotgun sequence.
ACCESSION   DATIKR010000554 DATIKR010000000
VERSION     DATIKR010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56315"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VLL76_08610"
     CDS             <1..201
                     /locus_tag="VLL76_08610"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HSV29608.1"
                     /translation="VEMFRDAIDTRLFRAGLAAREHGRALVVVTATPLSLDRLTQWMA
                     KSREQGMVFAPASALAQEGRKS"
     gene            198..695
                     /locus_tag="VLL76_08615"
     CDS             198..695
                     /locus_tag="VLL76_08615"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HSV29609.1"
                     /translation="MSKLIPFEQRPYRKGVGIVLQNRDGLVFVARRIDTKADAWQFPQ
                     GGIDDGEDPRTAALRELEEEIGTAKAEIVAESRDWLSYDLPRDVADKCWKGRFRGQAQ
                     KWFLLRFLGSDADIDIATEHPEFSEWRWMALADVPSVIVPFKRDLYERVVEEFLPLTR
                     NTESA"
     gene            779..1798
                     /locus_tag="VLL76_08620"
     CDS             779..1798
                     /locus_tag="VLL76_08620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29610.1"
                     /translation="MPKFRKDLADLRLRVAEAQMEAMGVKVDAYRKQVGQLAQQFDAL
                     ADRTAAEMAKDIKSRSLRHDTALKAMTAFYKAEKDFAASLTTMGSLWPFFCRWVADDE
                     SPVPPKAGLTKFEKSADPPPGAVVVAEKVSDSEGRLKVDVKGVAPETTASASASATFK
                     YVFTPNKSTSYMIRPNVLLNGWYLMWSWGTCAGGVTSDGRAKVTLRVRVDQFSETKAE
                     DEIVVLDVTSGEGGVEFPVAGADILAVSAALEAGHDAVVVVECEVTAEVTGYGRAIVD
                     LASTSGSYIKAPTVEATYMTCKLPLKPPPVIGPWPWPPIGPWPPKDIVERPEIDVIKP
                     TRPGR"
     gene            complement(1841..2662)
                     /locus_tag="VLL76_08625"
     CDS             complement(1841..2662)
                     /locus_tag="VLL76_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSV29611.1"
                     /translation="MKPHWTPDDIPWADFDASKLDPDILKVVKAAAMVERNATDYTHY
                     LKNVFKGDDTFITLAAQWQIEEVQHGDVLGRYAELADPDFKFPERFKRFTDGYRIPLE
                     AQSSVRGSLTGELLARCIVETGTSSFYSALRDATDEPVLKAICHRIAGDEFRHYKWFY
                     DYMKGTIAKEGVGLIRRAMVAAGRIKETDDDELAYAYHAANDPLDLPYERTRCYHAYA
                     GRAFRFYQAKHTERAVNMVLKVVGIDPQGWFGAKAKTFAARKMQQRVAELAARAA"
BASE COUNT          468 a          921 c          970 g          465 t
ORIGIN      
        1 gtcgagatgt tccgcgacgc catcgacacc cgcctgttcc gcgccggcct ggccgcgcgc
       61 gagcacggcc gcgccctggt ggtggtcacc gccactccgc tcagcctcga ccgcctgacc
      121 cagtggatgg ccaagagccg cgagcagggc atggtgttcg cccccgcctc ggctttggcc
      181 caggagggcc gcaaatcgtg agcaagctga tcccgttcga acagcgcccc tatcgcaagg
      241 gcgtcggcat cgtgctgcag aaccgcgacg gcctggtctt cgtggcgcgg cgcatcgaca
      301 ccaaggcgga tgcctggcaa ttcccccagg gcggcatcga cgacggcgag gacccgcgca
      361 cggccgcctt gcgcgagctg gaggaggaga tcggcaccgc caaggccgag atcgtcgccg
      421 aaagccgcga ctggctgtcc tacgacctgc cgcgcgacgt cgccgacaaa tgctggaagg
      481 gccgcttccg gggccaggcg cagaaatggt tcttgctgcg cttcctgggc agcgatgccg
      541 acatcgacat cgccaccgag catcccgaat tctcggaatg gcggtggatg gccttggccg
      601 acgtgccgag cgtgatcgtg ccgttcaagc gcgacctcta tgaacgggtg gtggaagagt
      661 tcttgccgct tacgagaaat acggagtccg cctgactccc acaagtagaa aaaactgata
      721 gcgtttcccc ctagtcggcc gcatcacggc ggtcggcctc tcaccagtgg gggatacgat
      781 gccgaaattc cggaaagatc ttgccgattt gcggctgcgg gtggccgagg cgcagatgga
      841 agccatgggc gtcaaggtcg atgcctatcg caagcaggtc gggcaattgg cccagcaatt
      901 cgacgccctg gccgacagga cggccgccga gatggcgaag gacatcaaga gccggtcgtt
      961 gcgccatgac accgccctca aggcgatgac cgccttctac aaggcggaaa aggatttcgc
     1021 ggcgtcgctg accaccatgg gctcgttgtg gccgttcttc tgtcgctggg tcgccgacga
     1081 cgaatcgccg gttccgccca aggccggcct gaccaagttc gagaaatcgg ccgatccgcc
     1141 tcccggcgcc gtggtggtgg ccgaaaaagt cagcgattcg gagggccggc tcaaggtgga
     1201 cgtcaagggc gtcgcgcccg agaccaccgc gtcggccagc gcctcggcca ccttcaagta
     1261 cgtgttcacg cccaacaagt cgaccagcta catgatccgg cccaacgttc tgctgaacgg
     1321 ctggtacctg atgtggtcgt ggggcacctg cgccggcggc gtgaccagtg acggccgcgc
     1381 caaggtcacc ctgcgcgtgc gcgtggacca gttctcggaa accaaggccg aggacgagat
     1441 cgtcgtgctg gacgtcacca gcggcgaggg cggtgtcgag ttccccgtcg ccggcgccga
     1501 catcctggcg gtcagcgcgg cgctcgaggc cggccacgac gccgtggtgg tggtggaatg
     1561 cgaggtgacg gccgaggtga ccggctatgg ccgcgccatc gtcgacctgg cgtcgacctc
     1621 gggctcgtac atcaaggcgc cgaccgtcga ggccacctac atgacctgca agctgccgct
     1681 caagccgccg ccggtgatcg gcccgtggcc gtggccgccg atcggtccgt ggccgcccaa
     1741 ggacatcgtc gagcggcccg agatcgacgt gatcaagccg acccggcccg gccggtaggc
     1801 gaggagcggg gcggcatcat cggatgccgc cccggccatc tcaggcggcc cgcgccgcca
     1861 gttcggccac ccgctgctgc atcttcctgg ccgcgaaggt cttggccttg gcgccgaacc
     1921 agccctgcgg gtcgatgccg accaccttca gcaccatgtt gacggcgcgc tcggtgtgct
     1981 tggcctggta gaagcggaag gcgcggccgg cataggcgtg gtagcagcgg gtgcgctcgt
     2041 agggcaggtc gagcgggtcg ttggcggcgt ggtaggcata ggccagctcg tcgtcgtcgg
     2101 tctccttgat gcggccggcg gcgaccatgg cgcggcggat caggccgacg ccctccttgg
     2161 cgatggtgcc cttcatgtag tcgtagaacc acttgtagtg gcggaactcg tcgccggcga
     2221 tgcggtggca gatggccttc agcaccggct cgtcggtggc gtcgcgcagc gccgaataga
     2281 acgacgaggt gccggtctcg acgatgcagc gggccagcaa ctcgccggtc agcgagccgc
     2341 gtaccgagga ttgcgcctcc agcgggatgc ggtagccgtc ggtgaagcgc ttgaagcgct
     2401 cggggaactt gaagtcggga tcggccagct cggcatagcg gcccagcacg tcgccatgct
     2461 gcacttcctc gatctgccac tgcgcggcca gggtgatgaa ggtgtcgtcg cccttgaaca
     2521 cgttcttgag atagtgggtg tagtcggtgg cgttgcgctc gaccatggcg gcggccttga
     2581 ccaccttcag aatgtcgggg tccagcttgc tggcgtcgaa atcggcccac ggaatgtcgt
     2641 cgggcgtcca atgcggcttc atgctttccc ctcctgtgtc acccccaccg ggtgcgccat
     2701 tttgtgccgt tgtgcggaat tttcaatgac aaaggggccg ccccgaagga cggcccctca
     2761 tgccatttcg caaggcgcga acagccttag tgcgcgacgg cctcaagcgc ggcggcgatg
     2821 gcca
//
LOCUS       DATIKR010000555         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_226512, whole genome shotgun sequence.
ACCESSION   DATIKR010000555 DATIKR010000000
VERSION     DATIKR010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226512"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..591)
                     /locus_tag="VLL76_08630"
     CDS             complement(106..591)
                     /locus_tag="VLL76_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV29612.1"
                     /translation="MAIPRNPKTPGRRKSSRGRTPSGKPNPIDIHVGARVRLRRTLLG
                     MSQEKLGEALGLTFQQVQKYERGANRIGASRLFDLSRVLDVPVSFFFDDMTDDVKKQA
                     PALLSADCSLEEPQGEYVANPMARRETLELVRAYYRITDPAVRKRVYELAKALADAAE
                     K"
     gene            complement(724..>2033)
                     /gene="lnt"
                     /locus_tag="VLL76_08635"
     CDS             complement(724..>2033)
                     /gene="lnt"
                     /locus_tag="VLL76_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HSV29613.1"
                     /translation="IAHALLVEPEKFGWMIPFATLGLGGVLAVFTGTATWLAHLTRVR
                     GPGRVAMLAATWTLMEWARSWVLTGLPWNPVGSVWDPVLPVLQFGAVAGVFGLSLVTV
                     LAAALPALLADRLTTRAKAAILALAAGLPLALGLWGAARLSSAGPAPEVAGVRLRLVQ
                     AAIGQSHKWKEELRQAHLDAYVRLSRSAGFESVTHVVWPETAAPFFLDMDAANRSRVA
                     QAAPPGGMVLTGAPRVTPRETQPFQVWNSLMAVTALGDVVATYDKVHLVPFGEYVPFR
                     AVLPASLNIGGHDFSPGPGLRTLDLPGLPPFSPLICYEAIFPAAVVGRDEKRPAWLLN
                     VTNDAWFGLSAGPYQHLASARMRAIEEGLPLVRAANTGVSAVFDGHGREIARLGLGEQ
                     GVVDSQLPAAPGEVTVFSRLGNLSALLMAAMVALLGFATRKEL"
BASE COUNT          335 a          698 c          714 g          286 t
ORIGIN      
        1 gtggcaggcc ccccggcctt tcgtcaagtc ccatcatgtc gaagggggga tggccttggg
       61 ggcagggcgg cgggcgcggc ggaatacccg cgcccgccca aacggttact tctcggccgc
      121 gtcggccagg gccttggcca attcgtagac ccgcttgcgc accgccgggt cggtgatgcg
      181 gtaataggcg cgcaccagtt ccagcgtctc gcgccgggcc atggggttgg cgacgtactc
      241 gccctggggc tcctcgagcg aacaatcggc cgacagcagc gccggggcct gcttcttcac
      301 gtcgtcggtc atgtcgtcga agaagaagct gaccggcacg tcgagcacgc gcgacaggtc
      361 gaacaggcgc gaggcgccga ttcgattggc gccgcgctca tatttctgga cctgctggaa
      421 ggtcaggccc agggcttcgc ccaacttttc ctggctcatg cccagaaggg tgcggcgcag
      481 gcggacgcgg gcgccgacat ggatgtcgat ggggttgggc ttgccggacg gcgtgcggcc
      541 gcgcgacgac ttgcggcggc cgggcgtctt ggggttgcgg ggtatggcca tgggagattc
      601 agcttcacgc tgttgaaagg aaaccggccg gtggctggtg gattccaaga atacatggcg
      661 atgtatgcaa gtcaacgtac aacaaaatgg gcgtttgtcg ttgtggttgt gcttttgccc
      721 gtgctacagc tctttgcggg tggcaaatcc tagcaaagcg accatcgccg ccatgagaag
      781 cgccgaaagg ttgcctaacc gcgaaaacac cgttacttcc ccgggagccg ccggcaattg
      841 cgaatccacc acgccctgct ctcccagccc caatcgggcg atttcgcggc catgtccgtc
      901 gaacaccgcc gagacgccgg tgttcgcggc gcgcaccagc ggtaggcctt cctcgatagc
      961 gcgcatgcgg gccgaggcga ggtgctggta ggggccggcc gacagcccga accaggcgtc
     1021 gttggtgacg ttgagcagcc aggccggccg cttctcgtcg cgcccgacca cggcggccgg
     1081 gaagatcgcc tcgtagcaga tcagcgggct gaacggcggc agcccgggca ggtccagggt
     1141 gcgcaggccc ggccccggcg agaagtcgtg gccgccgatg ttgagcgagg ccggcagcac
     1201 ggcgcggaac ggcacgtatt cgccgaacgg caccagatgc accttgtcgt aggtggccac
     1261 gacgtcaccc agcgcggtca ccgccatcag gctgttccac acctggaacg gctgcgtctc
     1321 gcgcggggtg acgcgcggcg cgccggtcag caccatgccg ccgggcggcg ccgcctgggc
     1381 cacgcggcta cggttggcgg catccatgtc gaggaagaac ggcgccgccg tctcgggcca
     1441 caccacatgg gtcaccgatt cgaagccggc cgagcgcgac agccggacat aggcatcgag
     1501 atgggcctgg cgcagctcct ctttccactt gtggctctgg ccgatggcgg cctggaccag
     1561 gcgcaggcgc acgcccgcca cctcgggcgc cgggccggcc gacgacagcc gggccgcgcc
     1621 ccacagcccc agcgccagcg gcagacccgc cgccagggcc agaatcgcgg ccttggcccg
     1681 cgtcgtcagg cggtcggcca gcagcgccgg cagggcggcg gccagcacgg tgaccagcga
     1741 gaggccgaac accccggcga cggcgccgaa ttgcagcacc ggcagcaccg gatcccacac
     1801 cgatcccacc gggttccacg gcaggccggt cagcacccac gaccgcgccc attccatcag
     1861 ggtccaggtc gcggccagca tcgccacgcg gcccggcccg cgcacccgcg tcagatgggc
     1921 cagccaagtg gcggtgccgg tgaacaccgc cagcacgccg cccaaaccca gggtggcgaa
     1981 ggggatcatc cagccgaatt tctcgggctc gaccagcagg gcgtgggcga tcc
//
LOCUS       DATIKR010000556         1608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_128995, whole genome shotgun sequence.
ACCESSION   DATIKR010000556 DATIKR010000000
VERSION     DATIKR010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128995"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1608)
                     /gene="ftsH"
                     /locus_tag="VLL76_08640"
     CDS             complement(<1..>1608)
                     /gene="ftsH"
                     /locus_tag="VLL76_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HSV29614.1"
                     /translation="EFMTEVEQGRVSDVTIQGYTVTGHMTGDNRPFTTYLPPEANVVP
                     KLRESGVKITAMPPADDQPTLWSILVSWFPMLLLIGVWIFFMRQMQGGGGKAMGFGKS
                     RARLLTEKTGRVTFEDVAGIDEAKQELEEIVEFLKDPQKFQRLGGKIPKGCLLVGPPG
                     TGKTLLARAIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEI
                     DAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPG
                     RFDRQVVVPNPDILGREKILKVHMRKVPLAPDVEPKIIARGTPGFSGADLSNLVNEAA
                     LLAARAGKRVVTMAEFESAKDKVMMGAERRSMVMSEDEKRLTAYHEAGHAVVMMHVPG
                     HEPLHKVTIIPRGRALGVTMSLPERDRLSLSFMQLKAMMASLFGGRIAEEMIFGMDAV
                     TTGASNDIQRATDLARKMVTEFGFSEKLGPLRYNDNQEEVFLGHSVTQHKNVSEATAS
                     LIDSEVRRFVEVGEQTARKILTDHIDEL"
BASE COUNT          244 a          515 c          559 g          290 t
ORIGIN      
        1 agctcgtcga tgtggtcggt caggatcttg cgggcggtct gctcgcccac ttcaacgaac
       61 cggcggacct cggagtcgat caggctggcg gtggcctcgg aaacgttctt gtgctgcgtc
      121 accgaatggc cgaggaaaac ctcttcctgg ttgtcgttgt agcgcagcgg cccgagcttt
      181 tccgagaagc cgaactcggt gaccatcttg cgggccaggt cggtggcgcg ctggatgtcg
      241 ttggaggcgc cggtggtgac cgcgtccatg ccgaagatca tctcttcggc gatacggccg
      301 ccgaacaggc tggccatcat ggccttgagc tgcatgaacg acaggctgag acggtcgcgc
      361 tcgggcagcg acatggtcac gcccagggcg cggccacggg ggatgatggt gaccttgtgc
      421 agcggttcgt gaccgggcac gtgcatcatg acgacggcgt ggccggcctc gtgataggcg
      481 gtcaggcgct tctcgtcctc gctcatcacc atcgagcggc gttcggcgcc catcatcacc
      541 ttgtccttgg cggactcgaa ctcggccatg gtgacgacgc gcttgccggc gcgggcggcc
      601 agcagggcgg cctcgttgac caggttcgac aggtcggcgc ccgagaagcc gggggtgccg
      661 cgcgcgatga tcttgggctc cacgtcgggg gccagcggca ccttgcgcat atggaccttg
      721 aggatcttct cgcggcccag gatgtcgggg ttgggcacca ccacctgtcg gtcgaagcgg
      781 ccggggcgca gcagcgccgg gtccagcacg tcgggccggt tggtggcggc gatcaggatg
      841 acgccttcgt tggactcgaa gccgtccatc tcgaccagca actggttcag ggtctgctcg
      901 cgctcgtcat tgccgccacc caggccggcg ccacgatggc ggccgacggc gtcgatctcg
      961 tcgatgaaga tgatgcaagg cgcgttcttc ttgccctgct cgaacatgtc gcggacgcgc
     1021 gacgcgccga cgccgacgaa catctcgaca aagtcggaac ccgagatggt gaagaacggc
     1081 acgttggcct cgccggcgat ggcgcgggcc agcagcgtct tgccggtgcc gggcgggccg
     1141 accagcaggc agcccttggg gatcttgccg cccaggcgct ggaacttctg cgggtccttc
     1201 aggaactcga cgatctcttc cagctcctgc ttggcctcgt cgatgccggc aacgtcctcg
     1261 aaggtgacgc ggccggtctt ctcggtcagc aggcgggcgc ggctcttgcc gaagcccatg
     1321 gccttgccgc cgccgccctg catctggcgc atgaagaaga tccacacgcc gatcagcagc
     1381 agcatgggga accacgacac caggatgctc cacagcgtcg gctggtcgtc ggccggcggc
     1441 atggcggtga tcttgacgcc gctctcgcgc agcttgggca cgacgttggc ttcgggcggc
     1501 agataggtgg tgaacggacg gttgtcgccg gtcatgtggc ccgtcacggt atagccctgg
     1561 atggtcacgt cgctgacccg gccctgctcc acctcggtca tgaattcc
//
LOCUS       DATIKR010000557         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_129025, whole genome shotgun sequence.
ACCESSION   DATIKR010000557 DATIKR010000000
VERSION     DATIKR010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129025"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VLL76_08645"
     CDS             complement(<1..570)
                     /locus_tag="VLL76_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV29615.1"
                     /translation="MSEDAGNTSGSGKPPAWGDLAEMSARLDGMAASLPGFAFQRRMD
                     PSGALSYPYFTDNVRDVLGFEPAAMAVNAKGCLHVVHWADRENHLDAIRRSSATLSPC
                     TEEFRAITRSGEVRWLKGAAKPRRAADGSVLWDGVLIDVTDGRRAELRLDMLMDHAAD
                     SIIVLNEAGNVDTVNVAAERLFGWTDAELA"
     gene            complement(690..>1602)
                     /locus_tag="VLL76_08650"
     CDS             complement(690..>1602)
                     /locus_tag="VLL76_08650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HSV29616.1"
                     /translation="GAGFLGSHLCERLLARGCDVLCVDNFYTGTKDNIAHLIGNPYFE
                     LLRHDVTWPLYVEVDEIFNLACPASPIHYQKDPVQTTKTSVHGAINMLGLAKRVKAKI
                     FQASTSEVYGDPEVHPQTEDYRGSVNPIGPRACYDEGKRCAETLFFDYHRQHGLGIKV
                     ARIFNTYGPRMHPDDGRVVSNFIVQALEGRDITIYGDGSQTRSFCFVDDLIEGFLRLM
                     DSPDDVTGPVNLGNPHEMTVKELAETVVAMTGSKSEIVYKPLPADDPMQRQPDITLAR
                     KLLNWEPQVKLEAGIGRTIEYFRSRLG"
BASE COUNT          245 a          506 c          565 g          286 t
ORIGIN      
        1 ggccagctcg gcgtccgtcc agccgaacag gcgctcggcg gcgacgttga cggtgtcgac
       61 gttgccggcc tcgttcagca cgatgatgga atcggcggcg tggtccatca gcatgtcgag
      121 ccgcaactcg gcgcgacggc cgtcggtgac gtcgatcagc acgccgtccc acagcacgct
      181 gccgtcggcg gcgcggcgcg gcttggcggc gcccttcagc cagcgcacct cgcccgagcg
      241 ggtgatggcg cggaattcct cggtgcaggg cgacagcgtg gctgacgagc ggcggatggc
      301 gtcgagatgg ttctcgcggt cggcccaatg caccacgtgc aggcagccct tggcgttgac
      361 cgccatggcg gccggttcga agcccagcac gtcgcggacg ttgtcggtga aataggggta
      421 ggacagcgca cccgacgggt ccatgcggcg ctggaaggcg aagcccggca ggcttgcggc
      481 catgccgtcg agccgcgccg acatctcggc gagatcgccc cacgccgggg gctttccgct
      541 accgctggtg ttgcccgcgt cctcgctcac gtcacctcgc ccgccacccc gtcagggcgg
      601 cctcacttca tgtgcgcgtt gtgatggtat cggccttgcg cgacggaggc aacggcgtag
      661 acctttggaa tcgtccaaag gccgtcgcgt cagcccaatc tgcttcggaa gtattcgatc
      721 gtccgcccga tgcccgcctc gagcttcacc tgcggctccc agttcagcag cttgcgggcc
      781 agggtgatgt cgggctggcg ttgcatggga tcgtcggccg gcagcggctt gtagacgatc
      841 tcggatttcg agccggtcat ggcgacgacg gtctcggcca gttccttgac ggtcatctcg
      901 tgcgggttgc ccaggttgac cgggccggtg acgtcgtcgg gcgagtccat caggcgcagg
      961 aagccctcga tcagatcgtc cacgaaacag aacgaccggg tctggctgcc gtcgccatag
     1021 atggtgatgt cgcggccttc cagggcctgc acgatgaagt tcgacaccac gcggccgtcg
     1081 tcggggtgca tgcgcgggcc gtaggtgttg aagatgcgcg ccaccttgat gcccaggccg
     1141 tgctggcggt ggtagtcgaa gaacagggtc tcggcgcagc gcttgccctc gtcgtagcag
     1201 gcgcgcgggc cgatggggtt gaccgagccg cgataatcct cggtctgggg atggacctcg
     1261 gggtcgccgt acacttccga ggtggacgcc tggaagatct tggccttcac ccgcttggcc
     1321 aggcccagca tgttgatggc gccgtgcacg ctggtcttgg tcgtctgcac cggatccttc
     1381 tggtaatgga tcggcgaggc cgggcaggcc aggttgaaga tctcgtcgac ctcgacgtaa
     1441 agcggccagg tgacgtcgtg gcgcagcagt tcgaaatacg ggttgccgat gaggtgggcg
     1501 atgttgtcct tggtgccggt atagaagttg tcgacgcaca gcacgtcgca gcctcgcgcc
     1561 agcagccgct cgcacaggtg cgaaccaagg aatccagcgc ca
//
LOCUS       DATIKR010000558         2526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_141785, whole genome shotgun sequence.
ACCESSION   DATIKR010000558 DATIKR010000000
VERSION     DATIKR010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141785"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..270
                     /locus_tag="VLL76_08655"
     CDS             37..270
                     /locus_tag="VLL76_08655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29617.1"
                     /translation="MSKAIVIAAMTDGSRVAFGSNGRAVVERPLDGANPCAASDFAGC
                     IVHLVEGQADAHAVAKSIGLRGLHQWTVEANHA"
     gene            263..580
                     /locus_tag="VLL76_08660"
     CDS             263..580
                     /locus_tag="VLL76_08660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29618.1"
                     /translation="MHDRQLIDRAAVARMLGMTVEKFYKRYADLHAHKTNPFPGPVLG
                     SMSGSRWDPLAITRWIDAGGEHPPPPTSPPPAPAGAATPDSDRERRKAERRRRAAELA
                     EAG"
     gene            678..830
                     /locus_tag="VLL76_08665"
     CDS             678..830
                     /locus_tag="VLL76_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29619.1"
                     /translation="MDDHYSFIDRHAAQLRAVGYGVAIDYKSFPRRSKGWRRHLRRIK
                     AHQRQI"
     gene            895..1176
                     /locus_tag="VLL76_08670"
     CDS             895..1176
                     /locus_tag="VLL76_08670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29620.1"
                     /translation="MSPELHDRLIENITHRIWGRDVGPSIGIYQEACRILTAARCAFE
                     DEGVDIEQASNIRKALVALLDLVSDTDFERYDPEVAAAVANARRALGEE"
     gene            1189..2349
                     /locus_tag="VLL76_08675"
     CDS             1189..2349
                     /locus_tag="VLL76_08675"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSV29621.1"
                     /translation="MARIDVPYLIAKPGAKGGTRYFWQPSSALRGLGWRSERLPDDVG
                     QAIERAKELNRQLESWRKGETPAPAVGQGAPGPIVRPGTVADLIRRYKASRFYPDNET
                     TRESYDRHLRTIEDWAGQDLVTDIDAGDIQDLYESFRAATPAKAAAVIRVARLLFQCA
                     VRFDMRKDNPAAKPGLEGAPFAGRLWPIEAVLLVVEAADKAGRHSIGTAVLINWWLGQ
                     RLKDIIALKRIQYRDGRIWITQSKTNARVSVPHSPLVARRIEQEMARLDARKVTSTHL
                     IVHEGTSQPYNIHTFKHDFADIRAAAAKEWGTFFLDDGSTVDLVDLHFRHLRHTAITE
                     LAAAGCDAPLIATFSGHTIKSVEQILDRYLVRSSELAMVAANKRMERDRDRF"
BASE COUNT          476 a          891 c          777 g          382 t
ORIGIN      
        1 cctggcccac caggctcagg ctgcggagtg acgcccatgt ccaaagcaat tgtcatcgcc
       61 gccatgaccg acggctcccg cgtcgccttc ggctccaatg gccgggccgt ggtcgagcgt
      121 ccgctcgatg gcgccaaccc ctgcgccgcc agcgacttcg ccggctgcat cgtccacctg
      181 gtcgaggggc aggccgacgc tcatgcggtc gcgaaaagca ttggcctgcg cggccttcac
      241 cagtggacgg tcgaggcgaa ccatgcatga ccgccagctg atcgaccgcg ccgccgtcgc
      301 ccgaatgctc ggcatgaccg tggagaagtt ctacaagcgc tatgccgatc tgcacgccca
      361 caagaccaac ccctttccgg ggcccgtgct gggcagcatg agcggatccc gctgggaccc
      421 cctggccatc acccgctgga tcgacgccgg cggcgaacac ccgccgcccc ccacgtcgcc
      481 gccaccggcg ccggccggcg ccgcaactcc ggacagcgat cgcgaacgcc gcaaagccga
      541 acgccgccgc cgcgcagccg aactggcgga ggcggggtga aggggggacg acgtcatgcc
      601 gtcgatacca tgggatagcc tgttgaccgg ggacagccct tgggggcacc gccacagaca
      661 gtgaaggagg atatacggtg gacgatcatt acagctttat cgaccgacac gccgcgcagc
      721 tccgcgctgt cggctatggc gtggccatcg actacaaatc ctttccacgc cggtccaagg
      781 gctggcgccg ccaccttcgc cggatcaagg cgcaccagcg ccaaatctga agtttcccct
      841 cataacacgc cgaagctctg ctaggctttg gtcaggacaa tcaagggtaa agccatgtct
      901 ccggaactgc atgaccgcct gatcgagaac atcacccacc gaatatgggg cagggatgtg
      961 ggccccagca ttggcatcta tcaggaagcg tgtcgcatcc tcacggcggc acggtgcgcc
     1021 ttcgaggatg agggtgtgga tatcgaacag gcttccaaca ttcgaaaggc cctggtcgcc
     1081 ctgttggact tggtcagtga caccgacttt gagcgttacg atcccgaggt tgccgccgct
     1141 gtggccaatg cccggcgagc gctcggggag gaataggaca gcaacgccat ggcccgcatc
     1201 gacgtcccct acctgatcgc caagcccggc gccaagggcg gcacccgcta tttctggcag
     1261 ccgtcgtcgg ccttgcgcgg cctgggctgg cgttccgagc gtctgcccga cgacgtcggc
     1321 caggcgatcg aacgggccaa ggaactcaat cgccagctcg aatcctggcg caagggtgag
     1381 acgccggcgc cggcggtcgg gcagggggcg ccggggccca tcgtccggcc gggcacggtg
     1441 gccgacctga tccgccgcta caaggccagc cggttctacc ccgacaacga aaccacccgc
     1501 gaaagctacg accgccacct gcgcaccatc gaggactggg ccgggcagga cctggtcacc
     1561 gatatcgacg ccggcgatat ccaggatctg tacgagagct tccgcgcagc cacgccggcc
     1621 aaggcggccg ccgtcatccg cgtcgcccgc ctgctgttcc aatgcgccgt gcgcttcgac
     1681 atgcgcaagg acaacccggc cgccaagccg ggactcgagg gcgcgccctt cgccggccgc
     1741 ctgtggccga tcgaggcggt gctgctggtg gtcgaagcgg ccgacaaggc cggccggcat
     1801 tccatcggca cggcggtgct gatcaactgg tggcttggcc agcgcctgaa ggacattatc
     1861 gcgctgaagc gcatccagta tcgcgacggc cggatctgga tcacgcaatc caagaccaac
     1921 gcccgcgtgt ccgtgcctca ctcgccgctg gtggcgcgcc gcatcgaaca ggagatggcg
     1981 cgcctcgacg cccgcaaggt caccagcacc cacctgatcg ttcacgaggg caccagccag
     2041 ccctacaaca tccacacgtt caagcacgac ttcgccgata tccgcgcggc cgccgccaag
     2101 gaatggggaa ccttcttcct cgacgacggc tcgaccgtcg acctggtcga cctccacttc
     2161 cgccacctgc gccacaccgc catcaccgaa ctggccgccg ccggctgcga cgccccgctg
     2221 atcgccacct tctcgggcca cacgatcaag agcgtcgaac agatcctcga ccgctacctg
     2281 gtccgctcct ccgaactggc catggtggcc gcgaacaagc gcatggaaag ggatcgggat
     2341 cggttctgac ggcccgaaaa aactgtcaga cttcgcccca aaaggcccga aagtctgacg
     2401 gaacaggaac gtgtagacga ttgtttttcc tgcattttgc caagactttt aatcatgggg
     2461 tcgtgggttc gagtcccacc gcgctcacca agaaaaaccc cgccagccca atgggttggc
     2521 ggggtt
//
LOCUS       DATIKR010000559         2570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_178055, whole genome shotgun sequence.
ACCESSION   DATIKR010000559 DATIKR010000000
VERSION     DATIKR010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178055"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..989
                     /locus_tag="VLL76_08680"
     CDS             <1..989
                     /locus_tag="VLL76_08680"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV29622.1"
                     /translation="LQESHANLLNAQRRADTYRKRLDELVLASHDAILIIEPDGFVSR
                     WNKPANELFGFGSAHRPGRVFSDFLPFAMRDQVTRMVSEARFGHASHAQAFDVAVGLG
                     CRNLLVSAFPLGDPPGTVAVVAQDQTETVLFREQLAKSMEATIEALASAMEARDPYTA
                     GHQRRTAELARRIALKMGLPEDEARGVYTAAVIHDIGKICVPAEILTCPRRLNDAELA
                     LIRMHSQAGHDIVRSVRFPWPVAVMILQHHERMDGSGYPNGITGSQIHVGARIIGVAD
                     AVEAITNHRPYRAALGLDVARQELVKGKFGPFAPDAVDACLAVLEEADHPLQ"
     gene            1055..>2570
                     /locus_tag="VLL76_08685"
     CDS             1055..>2570
                     /locus_tag="VLL76_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSV29623.1"
                     /translation="MAPIPYTDAFLRQILHSVKTIAVVGASSNWNRPSYFVMKYLQEK
                     GYRCIPVNPGMAGQELLGETVYKDLASIPEPVDMVDIFRNSEAAGPITDEAVAIGAKV
                     VWMQLSVRNDEAAARAEAAGLKVVMDRCPKIEFGRLGGELGWFGVNSGIISNRPLEAP
                     RPKKERAETAGGPPPKYGFATKAIHAGAAPDATTGARTTPIYQTTSYVFEDVDHAASL
                     FNLHTFGYIYSRLTNPTVSVLEERVAALEGGRAAVAAASGHAAQFLTFFTLLEPGDHF
                     VASRNLYGGSLTQFGLSFKKLGWECSFVEPTPEAFKAAIGEKTKAIFIESLANPGGIV
                     VDIEAVAKVAHDAGIPLIVDNTLATPFLCRPIEWGADIVVHSTTKFMAGHGNSVGGVV
                     VESGRFNFAQNDKFPSLTKPEPAYHGLTFYETFGDFAFTTKARAVALRDFGPSLAPMN
                     AFLTITGIETLHVRMERHCANAAKVAAFLKDHPAVAWVSYAGLDGSPYKALQQKY"
BASE COUNT          436 a          930 c          795 g          409 t
ORIGIN      
        1 ggttgcagga aagccacgcc aacctgctga acgcccaacg ccgcgccgac acctaccgca
       61 agcggctgga cgaactggtg ctggccagcc acgacgccat cctcatcatc gaacccgacg
      121 gcttcgtcag ccgctggaac aagcccgcca acgagctgtt cggcttcggc tcggcccacc
      181 gccccggccg cgtcttcagc gacttcctgc ccttcgccat gcgcgaccag gtcacccgca
      241 tggtgtccga ggcccgcttc ggccacgcgt cgcacgccca ggcgttcgac gtggcggtgg
      301 ggttgggctg ccgcaacctg ctggtttcgg ccttcccgct gggcgacccg ccgggcaccg
      361 tcgcggtcgt ggcgcaagac cagaccgaga cggtgctgtt tcgcgagcaa ctggccaaga
      421 gcatggaggc caccatcgag gccctggcct ccgccatgga ggcgcgcgac ccctataccg
      481 ccggccacca gcgccggacc gccgaactgg cgcggcgcat cgccctcaag atggggctgc
      541 cggaagacga ggcacgcggc gtctacaccg ccgccgtcat ccacgatatt ggaaaaatct
      601 gcgtgccagc cgagatcctc acttgtccgc gccgcctcaa cgacgccgaa ctggctttga
      661 tccgcatgca ctcgcaggcc gggcacgaca tcgtccgcag cgtcaggttc ccctggccgg
      721 tggcggtgat gatcctgcag caccacgagc ggatggacgg cagcggctat cccaacggca
      781 tcaccggcag ccagatccat gtcggcgccc gcatcatcgg ggtggccgac gcggtcgagg
      841 ccatcaccaa ccatcgcccc taccgcgccg ccctgggcct ggacgtggcg cgccaggaat
      901 tggtgaaagg gaagttcgga ccgttcgccc ctgacgcggt ggacgcctgc ctggcggtgc
      961 tggaagaggc ggaccatccc ctgcaatgac cctttttgtg gcgcggcggc ttctgtaagc
     1021 tgtcgctccg cagaccggtt cgcaggagtt ccccttggcc ccgatcccct ataccgacgc
     1081 cttccttcgc cagattctac actcggtcaa gaccattgcg gtggtcgggg cgtcgtcgaa
     1141 ctggaaccgg cccagttatt tcgtgatgaa atacctgcaa gagaaggggt atcgctgcat
     1201 cccggtcaat cccggcatgg ccggccagga attgctgggc gagacggtct acaaggacct
     1261 ggcctcgatc cccgagccgg tcgacatggt cgacatcttc cgcaattcgg aggccgccgg
     1321 ccccattacc gacgaggccg tcgccatcgg cgccaaagtg gtgtggatgc agttgtcggt
     1381 gcgcaacgac gaggccgccg cgcgggccga ggccgctggc ctcaaggtgg tgatggatcg
     1441 ctgccccaag atcgagttcg gccggctggg cggcgagctg ggctggttcg gcgtcaattc
     1501 cggcatcatc tcgaaccgcc cgctcgaggc gccgcgcccc aagaaggagc gggccgagac
     1561 cgccggcggg ccgccgccca aatacggctt cgccaccaag gccatccatg ccggcgccgc
     1621 ccccgacgcc accaccggcg cccgcaccac gcccatctac cagaccacgt cctatgtgtt
     1681 cgaggacgtg gatcacgcgg catcactgtt caacctgcac accttcggct acatctactc
     1741 gcgcctgacc aaccccaccg tcagcgtgct ggaggagcgg gtggccgcgc tggaaggcgg
     1801 ccgcgccgcc gtcgccgccg cctcgggcca tgccgcccaa ttcctgacct tcttcaccct
     1861 gctggaaccc ggcgaccatt tcgtcgccag ccgcaacctg tatggcggct cgctgaccca
     1921 gttcggcctg tcgttcaaga agctgggctg ggaatgcagc ttcgtcgagc cgacccccga
     1981 ggcgttcaag gccgccatcg gcgaaaagac caaggccatc ttcatcgaaa gtttggccaa
     2041 tccgggcggc atcgtggtgg acatcgaggc ggtcgccaag gtcgcccacg acgccggcat
     2101 cccgctgatc gtcgacaaca ccctggccac gccgttcctg tgccggccca tcgagtgggg
     2161 cgccgacatc gtggtgcatt cgaccaccaa gttcatggcc ggccacggca attcggtggg
     2221 cggcgtggtc gtggaatcgg gccgcttcaa cttcgcccag aacgacaagt tccccagcct
     2281 gaccaagccc gagccggcct atcacggcct gaccttctac gagaccttcg gcgacttcgc
     2341 cttcaccacc aaggcccgcg ccgtggcgct gcgcgacttc ggcccgtcgc tggcgcccat
     2401 gaacgccttc ctgaccatca ccggcatcga gacgctgcac gtgcgcatgg agcgccattg
     2461 cgccaacgca gccaaggtcg ccgccttcct caaggatcat ccggcggtgg cgtgggtgtc
     2521 ctatgcgggt ctcgacggca gtccctacaa ggcgttgcag cagaaataca
//
LOCUS       DATIKR010000560         4107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_226522, whole genome shotgun sequence.
ACCESSION   DATIKR010000560 DATIKR010000000
VERSION     DATIKR010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226522"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VLL76_08690"
     CDS             complement(<1..262)
                     /locus_tag="VLL76_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HSV29624.1"
                     /translation="MPELPEVETVARGLAAVLEGRRLVHVECRRPDLRIPFPEGFAQR
                     LTGRLVDHVGRRAKYLVMRLDGGLVMLGHLGMSGRMVISRGRN"
     gene            complement(265..678)
                     /locus_tag="VLL76_08695"
     CDS             complement(265..678)
                     /locus_tag="VLL76_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007790136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSV29625.1"
                     /translation="MSHSALTIRTHGQGLTDITGPVAEFVRESGVADGLLTLFIQHTS
                     ASLTIQENADPDVLADLNDFFRRVVKEDPSLYRHTMEGADDMPAHIRSALTQVSLSIP
                     VIGGRMALGTWQGIYVFEHRARPHDRRVVLHLVGG"
     gene            complement(675..1727)
                     /locus_tag="VLL76_08700"
     CDS             complement(675..1727)
                     /locus_tag="VLL76_08700"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29626.1"
                     /translation="MTMRVIRLVALAMVALVSACGGGAHPQSQPTLQGGVMTEEFLVD
                     AKDDGVRLFIRNKRPAEYYNFRPEKTVLFLHGATFAGHSTFDLALDGTSWMDWMARRG
                     YDVYALDIRGYGKSTRPDAMGRPADQSEPLVDSATALRDVSKAVDFITSRRNLQKLVL
                     VGWSWGGTLAGQYATSASERVERLVLVGPQWLRDQPAPADMKLGAWRGVPLAQAQERW
                     LKAVPAAEQRELVPAHWLKAFADANQASDPDGARMDPPVLRAPNGVAADALKTWAVGV
                     PAWHPEKVSSPTLVVQGEWDSDNPPAMGLGVFSRLAHAPQRRYLLIGEGSHMLMLEKN
                     REHLFRAVQAFLEERL"
     gene            1821..2522
                     /locus_tag="VLL76_08705"
     CDS             1821..2522
                     /locus_tag="VLL76_08705"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29627.1"
                     /translation="MSIAAAFDRDARDYDRLRPVLIPCFADFYGVAVSLLDFPFDAPI
                     RVLDLGAGTGLLSMFVADAFPNARLTLVDVADEMLAKARERFDAMGRKVEVMTADYAD
                     ADLGQGWDAIVSALSIHHLEHDGKRRLFARVAGALRPGGVFVNAEQVLGETAFVEAGN
                     AAWWHREIRRLGASEADVAAALKRMEFDIMAPVADQLAWMAEAGLADAACHYRHHRFA
                     VMAARAGLSDASMEN"
     gene            complement(2578..3429)
                     /locus_tag="VLL76_08710"
     CDS             complement(2578..3429)
                     /locus_tag="VLL76_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase"
                     /protein_id="HSV29628.1"
                     /translation="MRPEDFDFIAKMLKDRSGLVITRDKAYLLESRLTPVARKRGLKS
                     LDDLVASMRTAGEDLLREVTEAMTTNESFFFRDMKPFDQFKDLVLPALLQSRATKKSF
                     RIWSAACSSGQEAYSLAMILKEEGARLAGWKIEIVGTDISNEMLEKAKAGLYSQFEVQ
                     RGLPINMLVKYFKKNNEMWQIDPAIRAMVQYREYNLLHDLKPLGQFDVVFCRNVLIYF
                     DQPTKSRVLENISKNMPDDGFLYLGGAETVLGISDRFKPIPDQRGVYSVTRATAGAAP
                     APAFGAR"
     gene            complement(3434..>4107)
                     /locus_tag="VLL76_08715"
     CDS             complement(3434..>4107)
                     /locus_tag="VLL76_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HSV29629.1"
                     /translation="QTTPIARPAAPPPRPAALHPGPVTLRNNAPEPPDVIAIGSSTGG
                     PQALFTLLGTMRAGTVRQPILITQHMPATFTTILAEHISRVSGWEAKEGVDGEVIKSG
                     RVYIAPGDFHMLVESRGADKVIRLNKDAPENFCRPSVDPMLRSISAAYGKRVLVAILT
                     GMGSDGAKGGKVVTEAGGTVIAQDEATSVVWGMPGAAAQAGICSAVLPLPDIAPWMMK
                     LAARR"
BASE COUNT          613 a         1381 c         1450 g          663 t
ORIGIN      
        1 cgttgcggcc ccggctgatg accatgcgcc ccgacatgcc gagatggccc agcatcacca
       61 acccgccgtc cagccgcatc accagatact tggcgcgccg ccccacatgg tccaccagac
      121 ggccggtcag gcgttgggcg aagccctcgg ggaaaggaat gcgcagatcg gggcggcggc
      181 attccacatg gaccagccgg cggccctcca gcacggcggc caggccgcgc gccacggtct
      241 cgacctcggg aagctcgggc atggtcagcc gcccaccaga tgcagcacga cgcggcggtc
      301 gtggggacgg gcgcggtgct cgaacacgta gatgccctgc caggtgccca acgccatgcg
      361 gccgccgatc accgggatgg acaggctgac ctgggtcagc gccgaccgta tgtgcgccgg
      421 catgtcgtcg gcgccttcca tggtgtggcg atagaggctg ggatcctcct tcaccacgcg
      481 gcggaagaag tcgttgaggt cggccagcac gtcgggatcg gcgttctcct ggatggtcag
      541 gctggccgag gtgtgctgga tgaacagcgt cagcaggccg tccgcgacgc ccgactcgcg
      601 cacgaactcc gccaccgggc cggtgatgtc ggtcaggccc tggccgtggg tgcggatggt
      661 cagcgcgcta tggctcacag cctctcctca aggaaggcct ggacggcgcg gaacaggtgc
      721 tcgcggttct tttccagcat cagcatgtgg ctgccctcgc cgatcagcag atagcgccgc
      781 tggggcgcgt gggcaaggcg cgagaacacg cccagaccca tggcgggcgg gttgtcggaa
      841 tcccattcgc cctgcaccac cagggtcggc gaggacacct tctccgggtg ccacgccggc
      901 acgcccaccg cccaggtctt gagcgcgtcg gcggccacgc cgttgggggc gcgcagcacc
      961 ggcgggtcca tacgggcgcc gtcggggtcg ctggcctggt tggcgtcggc gaaggccttc
     1021 agccaatggg ccggcaccag ctcgcgctgt tcggccgccg gcaccgcctt cagccagcgc
     1081 tcctgtgcct gggccagggg cacgccgcgc caggcgccca gtttcatgtc ggccggcgcc
     1141 ggctggtcgc gcagccattg cggcccgacc agcaccagcc gctcgacccg ctcgctggcc
     1201 gaggtggcgt actggccggc cagggtgccg ccccacgacc agcccaccag caccagcttt
     1261 tgcaggttgc ggcgcgaggt gatgaaatcg accgccttgg acacgtcgcg cagcgcggtg
     1321 gcggaatcca ccaaaggctc gctttggtcg gcgggccgtc ccatggcatc ggggcgggtg
     1381 gacttgccgt agccgcggat gtcgagggca tagacgtcat agccgcgccg cgccatccaa
     1441 tccatccaac tggtgccgtc cagcgccagg tcgaaggtgg aatggccggc gaaggtggcg
     1501 ccgtgcagga acagcacggt cttctcgggg cggaagttgt aatactcggc cgggcgcttg
     1561 ttgcggatga acaggcgaac gccgtcgtcc ttggcgtcga ccaggaattc ctcggtcatc
     1621 acgccgccct gcaaggtcgg ctgcgactgc ggatgggcac cgccgccgca ggccgagacc
     1681 agggccacca tcgccagcgc caccaggcgg atcacacgca tcgtcattct atgcccctct
     1741 ccaatcccgg ccagatcatg cccgtttcgg cccaacccgc caagccttga cggccccctt
     1801 ggctgtggca agctgacccg atgtcgatcg ccgccgcctt cgaccgcgat gcccgcgact
     1861 atgatcgcct gcgtccggtc ctgatcccct gcttcgccga tttctacggc gtggccgtgt
     1921 cgctgctgga tttcccgttt gacgcgccca tccgggtgct ggatctgggg gcggggacgg
     1981 ggctgctgtc catgttcgtc gccgacgcct tccccaacgc ccgcctgacc ctggtggacg
     2041 tggccgacga gatgctggcc aaggcgcgcg agcgtttcga cgccatgggc cgcaaggtcg
     2101 aggtgatgac ggcggattac gccgatgccg atctcggcca aggctgggac gccatcgtgt
     2161 cggcgctgtc gatccaccac ctcgagcacg acggcaagcg ccgcctgttc gcccgcgtcg
     2221 ccggggcgct gcggcccggc ggcgtgttcg tcaatgccga gcaggttctg ggcgagacgg
     2281 ccttcgtcga ggccggcaac gcggcgtggt ggcaccgcga gatccggcgc ctgggcgcca
     2341 gcgaggccga cgtggcggcg gcgctgaagc gcatggaatt cgacatcatg gcgccggtgg
     2401 cggaccagtt ggcgtggatg gccgaggccg gcctggccga tgccgcctgc cattaccgcc
     2461 accaccgctt cgcggtcatg gcggcgcggg ccgggctttc ggacgcctct atggaaaact
     2521 aaaccggata gcagtgagtc gagctggcga gcagtgggcg accggtcagg gcggggatca
     2581 gcgcgccccg aaggcggggg cgggggctgc gccggcggtg gcgcgggtga cggagtaaac
     2641 accgcgctgg tcggggatcg gcttgaagcg atcggaaatg cccagcaccg tctcggcgcc
     2701 gcccaggtac aggaaaccgt cgtcgggcat gttcttgctg atgttctcga gcacccggct
     2761 cttggtcggc tggtcgaaat agatcagcac gttgcggcag aacaccacgt cgaactggcc
     2821 cagcggcttg aggtcgtgca gcaggttgta ctcgcggtac tgcaccatcg cccggatggc
     2881 cgggtcgatc tgccacatct cgttgttctt cttgaagtac ttcaccagca tgttgatcgg
     2941 caggccgcgc tggacctcga actgggagta caggccggcc ttggcctttt ccagcatctc
     3001 gttcgagatg tcggtgccga cgatctcgat tttccagccg gccaggcggg cgccttcctc
     3061 tttcaggatc atggccagcg aataggcttc ctggcccgac gagcaggcgg ccgaccagat
     3121 gcggaagctc ttcttggtgg cgcggctctg cagcagcgcc ggcagcacca ggtccttgaa
     3181 ctggtcgaac ggcttcatgt cgcggaagaa aaacgactcg ttggtcgtca tggcctccgt
     3241 gacctcgcgc agcaggtcct cgccggcggt ccgcatgctg gcgaccaggt cgtccaagct
     3301 cttcaggccg cgcttgcggg ccaccggggt caggcggctt tccagcaggt aggccttgtc
     3361 gcgcgtgatg accagaccgg aacggtcctt cagcatcttg gcgatgaagt cgaaatcctc
     3421 gggccgcatg gcttcagcgc ctcgccgcca gtttcatcat ccacggggcg atgtcgggaa
     3481 gcggcagcac ggccgagcag atgccggcct gggccgccgc gccgggcatg ccccacacca
     3541 cgctggtggc ttcgtcctgg gcgatgacgg tgccgccggc ctcggtgacc accttgccgc
     3601 ccttggcacc gtccgagccc attccggtca ggatagcgac cagcacccgc ttgccgtagg
     3661 cggccgagat gctgcgcagc atgggatcga ccgacgggcg gcagaaattc tcgggcgcgt
     3721 ccttgttgag gcggatcacc ttgtcggcgc cccggctctc gaccagcatg tggaagtcgc
     3781 ccggcgcgat gtagacgcgg ccgctcttga tgacctcgcc gtccacgccc tccttggcct
     3841 cccaacccga cacgcggctg atgtgctcgg ccaggatggt ggtgaaggtg gcgggcatgt
     3901 gctgggtgat caggatcggc tggcgcaccg tgccggcgcg catggtgccc agcagagtga
     3961 acagcgcctg ggggccgccg gtggacgaac cgatggcgat gacgtccggc ggctcggggg
     4021 cgttgttgcg cagcgtcacc gggcccgggt gcagcgcggc ggggcgcggc ggcggggcgg
     4081 ccgggcgggc gatcggagtg gtctggg
//
LOCUS       DATIKR010000561         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_201747, whole genome shotgun sequence.
ACCESSION   DATIKR010000561 DATIKR010000000
VERSION     DATIKR010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201747"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLL76_08720"
     CDS             complement(<1..296)
                     /locus_tag="VLL76_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29630.1"
                     /translation="MIDPKDLEAYKFSLQQELEKFKYDRQCELEHYKEKMLRERHDWL
                     FSQTGAVELMRGVISLALLSLRSLIVVNGGAVIAILTFSGNLFSRADCRAMAKA"
     gene            433..>1713
                     /locus_tag="VLL76_08725"
     CDS             433..>1713
                     /locus_tag="VLL76_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSV29631.1"
                     /translation="MTKLPIILVVDDEKQSQDALRRVLSDDFRVLTASSAEEAETVLS
                     HELVHAILCDQRMPGMQGVDFLRQARERWPETVRMIISGYTESDDIIAGINDAGIYRY
                     ITKPWVPDELVGIVREALRLWELQQQAAGASLDLKVAPAAVEQVVAKKTGQLKRAHHF
                     DRIVHSPASPMAEVIELARKVAAFDISVLLTGESGTGKELLARAIHYSSPRGQKPFVV
                     ENCGALPDQLLESELFGCKKGAFTGAYEDRIGLFEQADGGTIFLDEIGETSPAFQVKL
                     LRVLQEGEIRPLGARLTRKVDVRVIAATNRNLEEDVRDKHFRRDLFYRLAAFPIHIPP
                     LRERPDDIPVLAERLLADVRKGFGKAVKGFGDDARVVLKSYDWPGNVRELQNEIQRMV
                     ALAESDVIGADDVSPRVRSRACPGGRALADGDQPR"
BASE COUNT          329 a          577 c          499 g          308 t
ORIGIN      
        1 attgcctttg ccatagcacg acagtcagca cgagaaaaca gattgccact aaatgtaagt
       61 atggcaatta ccgcaccacc atttacgaca attaaactcc ttaacgacag cagcgcaaga
      121 cttataactc ccctcatcaa ctcaaccgcc ccagtttgcg aaaacagcca atcatgccgc
      181 tcccgaagca tcttttcttt gtaatgctct aactcgcatt gtctgtcgta tttaaatttc
      241 tccaattcct gttgcagact aaatttataa gcttctaaat cctttggatc gatcatcaat
      301 actcctatcg ctaaccacct acacactgtc gaatttttat tgatggagca aggagcatgc
      361 aagccgcccc gtctcccttg accccacccc tccccgaata agacaatgcc ccctcagcat
      421 tccgggggcc ccttgaccaa gctgccgatc atcctggtgg tggacgacga gaagcagtcg
      481 caggacgcgt tgcggcgcgt gctatccgac gatttccggg tgctgacggc ctcgtcggcg
      541 gaagaggcgg agaccgtcct gtcccacgag ttggtccacg ccatcctgtg cgaccagcgg
      601 atgccgggga tgcagggcgt cgacttcctg cgtcaggcgc gcgagcgctg gcccgagacg
      661 gtgcggatga tcatctcggg ctataccgag tccgacgaca tcatcgccgg catcaacgac
      721 gccggcatct atcgctacat caccaagccg tgggtgcccg acgaactggt cggcatcgtg
      781 cgcgaggcgt tgcggctgtg ggagttgcag caacaggcgg cgggcgcgtc gctggacctc
      841 aaggtggcgc cggcggcggt cgagcaggtg gtcgccaaga agaccggcca gctcaagcgc
      901 gcccaccatt tcgaccgcat cgtccattcc cccgcctcgc ccatggccga ggtcatcgag
      961 ttggcgcgca aggtcgcggc cttcgacatc tcggtgctgc tgaccggcga atcgggcacc
     1021 ggcaaggagc ttttggcccg cgccatccac tattcgtcgc cgcgcggcca gaagccgttc
     1081 gtggtggaaa attgcggcgc cctgcccgac cagttgctgg aatcggagct gttcggctgc
     1141 aagaagggcg ccttcaccgg cgcctacgag gaccgcatcg gcctgttcga gcaggccgac
     1201 ggcggcacca tcttcctgga cgagatcggc gagacctcgc ccgccttcca ggtcaagctg
     1261 ctgcgcgtgc tgcaggaagg cgagatccgg ccgctgggcg cacgcctgac ccgcaaggtg
     1321 gacgtgcgcg tcatcgccgc caccaaccgc aacctggaag aggacgtgcg cgacaagcat
     1381 ttccgccgcg acctgttcta tcgcctggcc gccttcccca tccacatccc gccgctgcgc
     1441 gagcgccccg acgacatccc cgtgctggcc gaacgccttt tggccgacgt gcgcaaaggc
     1501 ttcggcaagg cggtgaaggg cttcggcgac gatgcccgcg tcgtgctgaa aagctatgac
     1561 tggcccggca acgtgcgcga gttgcagaac gagatccagc gcatggtcgc gctggcggaa
     1621 agcgacgtca tcggcgccga cgacgtcagc ccccgcgtcc gctcgcgcgc ctgccccggc
     1681 ggccgcgccc tggccgatgg cgaccagccg cgc
//
LOCUS       DATIKR010000562         3364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_141809, whole genome shotgun sequence.
ACCESSION   DATIKR010000562 DATIKR010000000
VERSION     DATIKR010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141809"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="VLL76_08730"
     CDS             complement(<1..680)
                     /locus_tag="VLL76_08730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29632.1"
                     /translation="MTKLPENLVLTCPLTVEAAQAGDKRTPRFHMVAYTGGLMRVEGF
                     PHPVVVDLEGLSIDRQEIPVRLDHHPRQGVGHTSRVAIDNGQVVAEGLISRDTSWARD
                     VARSGANGFPWQASIGAAVIEAEFIPHGQSVTVNGRTFSGPLHVVRKAVLKEISFVDS
                     GADGRTTVRVAAQPKEHEPMDEPVIPTHDTPVTPAEPAVAAAAQPAVVQAAEGPPAVQ
                     AVEPAPAPA"
     gene            complement(664..2049)
                     /locus_tag="VLL76_08735"
     CDS             complement(664..2049)
                     /locus_tag="VLL76_08735"
                     /inference="COORDINATES: protein motif:HMM:NF016991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HSV29633.1"
                     /translation="MWPFHRARKARRRLPAAIRARFDAAQTTAENARHWAMADGLSAD
                     AAASADVRKRLRERARYEVANNAYAKGIALTLANDCVGTGPRLQMLLADGLANHQLEA
                     AFGQWAQAAHLAEKLRTMRLAKVADGEAFAVLTANPLLEAPVQLDVQLVEADRVTAPM
                     GSPDAGVDGIVLDAFGHPQTYCLLRQHPGEPADLTGGFDRISADAMVHWFRADRPGQH
                     RGIPEITPALPLFAQLRRYTLAVIAAAETAADFAAVLFTDSPANGEAAAVEPMDVVEL
                     ERRMATVLPDGWKLGQVEAQQPATTYAEFKREILNEIARCLNMPYNIAAGNSSSYNYA
                     SGRMDHQTYHRSIRVEQAHMARTVLDRILAAWIEEARWLREFAFLRTLDHLPHQWFFD
                     GNEHVDPAKEARAQATRLASHTTTLAAEYARQGKDWETELRQRAKEIQLIQELHLAAP
                     DEEIAIDDQAA"
     gene            complement(2049..2246)
                     /locus_tag="VLL76_08740"
     CDS             complement(2049..2246)
                     /locus_tag="VLL76_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013565298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29634.1"
                     /translation="MTEALSESIKTSAEGPRRASGDSGSVEQHSLPDQIAADRYLESK
                     KAGRAKGLGIKVAKIAPGGAA"
     gene            complement(2351..2959)
                     /locus_tag="VLL76_08745"
     CDS             complement(2351..2959)
                     /locus_tag="VLL76_08745"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSV29635.1"
                     /translation="MSSGVTICSAAPQPPDPNGLAALYTVVSTASASTDHLIETHLPM
                     ARKMAADLHRRAPARVGLDELESDAVYALAEAARRFDASRGVTFQAYAARCIRHAMWR
                     MLKQRHRSAGTASLDGDEQASAALSNQIADDAPGPEHIVEVRQQVQCLLEHLQPRLRC
                     VAQGLLDGLTREQIAEQLGIARSTVFARINEIRDVAQALGIR"
     gene            complement(2952..3143)
                     /locus_tag="VLL76_08750"
     CDS             complement(2952..3143)
                     /locus_tag="VLL76_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29636.1"
                     /translation="MSTDTRQDRGLSCPACGCRHFFVIYTRRALGGRLMRRRECRHCG
                     RRITTCEAALGSLGSRGNV"
     gene            complement(3140..>3364)
                     /locus_tag="VLL76_08755"
     CDS             complement(3140..>3364)
                     /locus_tag="VLL76_08755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29637.1"
                     /translation="DHLTAEYRIKSLAQGRTVDEWKLRATRPDNHWLDCLVGCAVAAS
                     VQGAVLFGTESRQAADRSKIRLSAIQRRHA"
BASE COUNT          446 a         1158 c         1198 g          562 t
ORIGIN      
        1 gcgggtgccg gcgccggctc aacggcctgg acggccggcg gcccctcggc ggcctggaca
       61 acggccggct gggctgcggc ggccacggcc ggttcggccg gagtgaccgg ggtgtcgtgg
      121 gtcgggatta cgggctcatc cattggctca tgctccttgg gctgggcggc gacccggaca
      181 gtggttcggc cgtcggcgcc gctgtcgacg aacgagatct ctttaaggac cgccttgcgg
      241 accacgtgca gcgggccgct gaaggtcctg ccgttgacgg tgacggactg gccgtgcggg
      301 atgaactcgg cctcgatgac ggccgccccg atactggcct gccagggaaa gccgttggcc
      361 ccgcttcgtg ccacgtcccg cgcccaggag gtgtcgcggc tgatcagccc ctcggcgacg
      421 acctggccgt tgtcgatggc gacccggctg gtatggccga cgccttggcg cgggtggtgg
      481 tccaggcgga ccgggatctc ctgccgatcg atcgacaggc cctccaggtc caccaccacc
      541 gggtgcggga agccctcgac ccgcatgagc ccgccggtgt aggcgaccat gtggaaccgc
      601 ggcgtccgct tgtcacccgc ctgggcggcc tccaccgtca gcgggcaggt caggaccagg
      661 ttctcaggca gcttggtcat cgatcgcgat ctcctcatcc ggcgcggcca ggtgcagctc
      721 ctggatcagc tggatctcct tggcccgctg ccgcagttcg gtctcccagt ccttgccctg
      781 gcgggcgtac tcggcggcca gtgtagtggt atggcttgcc agtctcgtcg cctgcgcccg
      841 ggcctccttg gccgggtcca cgtgctcgtt gccgtcgaag aaccactggt gcggcaggtg
      901 gtccagggtc cgcaggaagg cgaactccct cagccaccgg gcctcctcga tccaggccgc
      961 caggatgcgg tccagtacgg tgcgagccat gtgggcctgc tcgacccgga tgctgcggtg
     1021 gtaggtctgg tggtccatcc ggccggaggc gtagttgtag ctggagctgt tgcctgcggc
     1081 gatgttgtac ggcatgttca aacagcgggc gatctcgttg aggatctcgc gcttgaactc
     1141 ggcgtaggtc gtcgccggct gctgggcctc gacctggccg agcttccagc cgtcgggcag
     1201 gaccgtggcc atgcgtcgtt cgagttcgac cacgtccatc ggctcgacgg cggccgcctc
     1261 cccgttggcg ggcgaatcgg tgaacagcac cgccgcaaag tccgccgccg tctcggccgc
     1321 cgcgatcacc gccagggtgt accgccgcaa ctgggcgaac agcggcaggg ccggcgtgat
     1381 ctcgggaatc ccgcggtgct ggcccggccg gtcggcccgg aaccagtgga ccatcgcatc
     1441 cgcgctgatc cggtcgaacc cgccggtcag gtcggccggc tcgcccgggt gctggcggag
     1501 caggcagtag gtctgcggat ggccgaaggc gtccagcacg atcccatcga cgccggcatc
     1561 cggggagccc atcggggccg tcacgcggtc ggcctccacc agctgcacgt ccagctggac
     1621 cggggcctcc agcagcgggt tggccgtcag caccgcaaag gcctcgccgt cggcgacctt
     1681 ggccagccgc atggtgcgga gcttttcggc caggtgggcc gcctgggccc actggccgaa
     1741 ggccgcttcg agctggtggt tggccagccc gtcggccagg agcatctgca gccgcgggcc
     1801 ggtgccgacg cagtcgttgg ccagcgtcaa ggcgatgccc ttggcgtagg cgttgttggc
     1861 cacctcgtag cgggcccgct cgcgcagccg cttgcggaca tcggccgagg cggccgcgtc
     1921 ggccgagagg ccgtcggcca tcgcccagtg gcgggcgttc tcggcggtcg tctgggccgc
     1981 atcgaagcgg gcgcggatcg cggccgggag gcggcgacgg gccttccttg ctctatggaa
     2041 cggccacact atgccgcccc tcccggcgcg atcttggcga ccttgatgcc caggcccttg
     2101 gcccggccgg ccttcttgga ctccaggtag cggtcggcgg cgatctggtc cggcagcgaa
     2161 tgctgctcga cgctgccgga atcgccgctg gcgcggcggg gtccttcggc gctggtcttg
     2221 atggattcgc tgagggcttc ggtcatgcgg aggcttctcc ctggcaccct ctatatctgc
     2281 ggatcggggg tttttgtcgc gcaggttctg gtgtcgatcg cggttcgccc acagggctcg
     2341 ctacagacga tcaccgtatc cccagtgctt gggctacgtc gcggatctcg ttgatcctgg
     2401 caaagaccgt agaccgggcg atgcccagct gctcggcgat ctgctcgcga gtcagcccat
     2461 ccagcaggcc ctgggcgacg catcgcagtc gcggctgaag gtgctccagc aggcactgca
     2521 cctgctggcg gacctccacg atgtgctccg ggccgggggc atcgtcggcg atctggttcg
     2581 acaacgccgc cgaggcctgc tcatcgccgt ccagcgaagc cgtgcccgcc gaccggtgcc
     2641 gctgcttgag catccgccac atcgcatggc ggatgcaccg ggctgcatag gcctggaagg
     2701 tcacgccgcg ggacgcatcg aaccggcggg ctgcctccgc cagggcatag accgcatccg
     2761 actccagttc gtcgagtccc acccgggccg gcgcgcggcg gtgaaggtcc gccgccatct
     2821 tgcgggccat aggcaggtgg gtctcgatca ggtggtcggt tgatgcggat gcggtactca
     2881 caacagtata tagtgcggcc aggccgttcg ggtccggcgg ttgcggtgcg gccgagcaga
     2941 ttgttacacc gctagacatt gccgcggcta ccgaggctgc ccaaggcggc ctcgcacgtc
     3001 gtgatccgcc ggccgcaatg ccggcactcg cgccgccgca tcagccggcc accgagcgca
     3061 cgacgggtgt agatcacgaa gaagtgccgg cagccgcagg ccggacagga caggccgcga
     3121 tcctgcctgg tgtcggtact catgcatgcc tccgctggat cgccgagagc cggatcttgg
     3181 aacggtcggc cgcctgccgc gactcggttc cgaacaacac cgcgccctgg accgatgcgg
     3241 ccaccgcgca gccgaccagg cagtccagcc agtggttgtc cggcctcgtc gcccgcagct
     3301 tccactcgtc gaccgtgcgg ccctgggcca gcgacttgat gcggtactcg gccgtcaggt
     3361 ggtc
//
LOCUS       DATIKR010000563         2647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_20100, whole genome shotgun sequence.
ACCESSION   DATIKR010000563 DATIKR010000000
VERSION     DATIKR010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20100"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VLL76_08760"
     CDS             <1..486
                     /locus_tag="VLL76_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29638.1"
                     /translation="NAAVQSVAPAVEAKEIAIETALPPDIPSIRGDPARLQQITWNLL
                     SNAVKFTDAGGRVTLSVTERDGALVLVVADNGIGMAPEDLERVMEPFVQADTRLSRKY
                     EGTGLGLPLTKALVTAHGGTLVLTSTPNQGTTATVTFPAERVVRDIKAAMAIEEALRR
                     G"
     gene            555..1367
                     /locus_tag="VLL76_08765"
     CDS             555..1367
                     /locus_tag="VLL76_08765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29639.1"
                     /translation="MPILRPAFGALAIMLVTATAQAQAPQAPAAPAPEAPQVERLPAE
                     EPAPGFQPIRPAGEEPAPAPVPPVQSQPQPEPAPAVMPAPAAPPAEEPVVPTPAQPQL
                     PAWSVAVLILAGAFLASLFGVLASTMARRGEINARRRAVAATLATEMETRRQAFEAVP
                     LPPNVEAGVFFVSAITSLSGIDAGFRSAQTDIHLLPDKLAAHISVHYAAVQRVADFVK
                     GQSLAAAVRMLQANRIGGHPCPDAGTMREAHVELTAAFRGTEKLVASLRQLG"
     gene            complement(1377..>2647)
                     /locus_tag="VLL76_08770"
     CDS             complement(1377..>2647)
                     /locus_tag="VLL76_08770"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29640.1"
                     /translation="QCCQECAKAFEQDEPVEFTEFYQPLGRWYFIRAVPHGEKLVVSF
                     RDVTAAKEADMVLRDSRALLSQVLEVLPIGVWVLDRDGTIVSANPEAKRIWGGAHFVG
                     IPDFSIYKGWRHDTGLPVAPEDWSAARAIRYNQPILDEELDILAFDGEPRVIRASAVP
                     LHDREGSLSGCIAVNQEITGQKRVEAALERALLEAHRANQSKSRMVAGLAHDLQQPLL
                     GIRLNLAHLLADLPPEKAEIVRTVIRSVESAERMVDSLTEVTAIEAGSVRPKPIDMDL
                     TEVVRATCAEFRAAADDKGLRLSCRSGTAPAMVHSDPLLLQRAVRNLVSNALRYTDEG
                     AVAVALRRRSDHYLVEVWDTGRGFPESALPHVFGEVVDPHAPSPKGFGIGLAAVSAIA
                     GLLGIEVSARSRVGAGSVFRLKVPAISPTA"
BASE COUNT          391 a          959 c          915 g          382 t
ORIGIN      
        1 aacgccgccg tccagtcggt cgccccggcc gtcgaggcca aggaaatcgc catcgagacg
       61 gccctgccgc cggacatccc ctccatccgc ggcgaccccg cgcggctcca gcagatcacg
      121 tggaacctgc tgtccaacgc cgtgaagttc accgacgcgg gtgggcgggt gaccctgagc
      181 gtcaccgagc gcgacggcgc cctggtgctg gtggtggccg acaacggcat cggcatggcg
      241 cccgaggacc tcgagcgcgt gatggagccg ttcgtccagg ccgacacccg gctgtcgcgc
      301 aagtacgagg gcaccggcct ggggctgccg ctgaccaagg cgctggtgac cgcccacggc
      361 ggcaccctgg tgctgaccag cacgccgaac cagggcacca ccgcgacggt caccttcccg
      421 gccgagcgcg tggtgcgcga catcaaggcg gcgatggcca tcgaggaagc gctgcgacgg
      481 ggctgatccc ctttccggcg cgggggagtt ggtctatggt gcgacgcctg cgtgatccca
      541 aggaaccgag gtcgatgcct atactccgtc ccgcgttcgg cgctctcgcc atcatgctcg
      601 tcaccgccac ggcccaggcc caggcgccgc aagccccggc cgcgccggcc cccgaggcgc
      661 cgcaggtcga gcgtttgccg gccgaggaac cggcgcccgg cttccagcca atccgccccg
      721 ccggcgagga acccgcgccg gccccggtgc cgcccgtcca atcccagccg cagcccgagc
      781 cggccccggc cgtaatgccc gcgccggccg cgccacccgc cgaagagccg gtggtcccga
      841 cgccggcgca gccgcaattg ccggcatggt cggtcgccgt gctgatcctg gcgggggcgt
      901 tcctggcgtc gctgttcggg gtgctggcaa gcaccatggc ccgccggggc gagatcaatg
      961 ctcgccgccg cgccgtcgcg gccaccctgg cgaccgaaat ggaaacccgc cgtcaagcct
     1021 tcgaggcggt gccgctgccg cccaacgtcg aggccggcgt gttcttcgtc tctgccatca
     1081 cctcgctgtc gggcatcgac gccggctttc gttcggccca gaccgacatc cacctgctgc
     1141 ccgacaagct ggcggcccac atctcggtgc attacgccgc cgtccagcgg gtcgccgact
     1201 tcgtcaaggg ccagagcctg gcggcggcgg tgcgcatgct gcaggccaac cgcatcggcg
     1261 gccatccgtg ccccgacgcc ggcaccatgc gcgaagccca tgtcgagctg accgccgcct
     1321 tccgtggcac cgaaaagctg gtcgcctcgc tcaggcagtt gggttgaccg cttcgctcag
     1381 gcagttgggc tgatcgccgg aaccttcagg cggaacaccg aacccgcacc gacccgcgag
     1441 cgcgccgaga cctcgatgcc gagcaggccg gcgatggcgc tgaccgccgc aaggccgatg
     1501 ccgaagccct tgggcgacgg cgcgtgggga tcgacgacct cgccgaacac gtggggcagg
     1561 gcgctttccg ggaaaccgcg gccggtgtcc cacacctcga ccaggtaatg gtcgctgcga
     1621 cggcggagtg ccaccgccac cgcgccctcg tcggtatagc gtagcgcgtt ggacaccagg
     1681 ttgcgcaccg cgcgctgcag cagcagcggg tcgctgtgga ccatggccgg ggcggtgccg
     1741 ctgcggcacg acaggcgcag gcccttgtcg tcggcggcgg cgcggaactc ggcgcaggta
     1801 gcgcggacca cttcagtcag gtccatgtcg atcggcttgg ggcgaacgct gcccgcttcg
     1861 atggcggtga cctcggtcag ggaatcgacc atgcgctcgg cggattccac agaccggatg
     1921 accgtcctca cgatctcggc cttttccggt ggcaggtcgg ccagcagatg ggccaggttg
     1981 aggcggatgc ccagaagcgg ctgctgcagg tcgtgggcca ggccggcgac catgcgcgac
     2041 ttggactggt tggcgcggtg ggcctccagc aaggcgcgct cgagcgccgc ctcgacccgc
     2101 ttctggccgg tgatctcctg gttgacggcg atgcagcccg acaggcttcc ttcgcggtcg
     2161 tgcaacggca ccgcgctggc ccggatgacc cggggctcgc cgtcgaaggc caggatgtcc
     2221 aattcctcgt cgagaatggg ttggttgtat cggatggcgc gggcggcgct ccaatcctcg
     2281 ggcgccaccg gcaggcccgt atcgtggcgc cagcccttgt agatgctgaa gtcggggatg
     2341 ccgacgaaat gggcgccgcc ccagatgcgc ttggcctcgg ggttggccga cacgatcgtc
     2401 ccgtcacggt ccagcaccca gacgccgatc ggcaacacct cgagcacctg cgacagcaac
     2461 gcccggctgt cgcgcagcac catgtcggct tccttggcgg cggtgacgtc gcggaaggac
     2521 accaccagct tttcgccgtg gggcaccgcc cggatgaagt accaccggcc caacggctgg
     2581 tagaattcgg tgaactcgac cggttcgtcc tgctcgaagg ccttggcgca ttcctggcag
     2641 cattggg
//
LOCUS       DATIKR010000564         3570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_45132, whole genome shotgun sequence.
ACCESSION   DATIKR010000564 DATIKR010000000
VERSION     DATIKR010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45132"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..166)
                     /locus_tag="VLL76_08775"
     CDS             complement(<1..166)
                     /locus_tag="VLL76_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSV29641.1"
                     /translation="MSDNIITNILVCGIGGQGVMTAAEILSQTAIAKGMDVKKSEVAG
                     MAQRGGVVTSH"
     gene            complement(178..2031)
                     /locus_tag="VLL76_08780"
     CDS             complement(178..2031)
                     /locus_tag="VLL76_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV29642.1"
                     /translation="MSAAVQAKANDRLLLSGNDAIARGVWEAGCRVAAAYPGTPSTEI
                     LECLSLYPDLYSEWSVNEKVSMEVAIGASMSGARAFCAMKHVGMNVASDAFMTQTLAG
                     VVGGLVIAVADDVGLSSSQNEQDSRYWGRFAHVPVLEPADSQEALDMVKVAFDLSEAY
                     NTPVIVRLTTRVCHVKAMVTVGERSEKPSAGFVLNAARWVMTPANAKGMLPKQIARED
                     SLRKAAEASDLNVVDDGSDRRIGFVTSGPAFQHVRESFPDSPVLKLGFTYPLPVEAIR
                     AFKAKVDRLVVVEETEPLMEGELKAAGMLDIHGKDILPRLGELSPAVLIPAIYRLRGE
                     EPPPTSTYPKYDPFPRPPTMCPACPHMGVYYCLSRLRKKVQISGDIGCYTLGAGQPWN
                     ALDTTISMGASMGIALGMDKARTEETKDKAVISVIGDSTFLHMGMQGMLDIVYNRGNV
                     TTLLLDNRSTGMTGGQHHAGTGKDLHGNEAPRVDFAKLCEALGVKPERIKTVDPYKLP
                     VLFKAIKDEMAVPEPSVIITNQPCVLSEFYAKMKPYKVIDEDCTGCGNCINVGCPAIT
                     VSRTAKETRKNGVEADLKFTQIDTAMCTGCHMCVDSCGPKAIVQMGPVAVA"
     gene            2215..3528
                     /locus_tag="VLL76_08785"
     CDS             2215..3528
                     /locus_tag="VLL76_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HSV29643.1"
                     /translation="MTALAANSWMYAPEIERMDRDQLAALQLDRLKATLAHAYANVPH
                     YRAAFDAKGVRPEDLTSLADLARFPFTVKSDLRDNYPFGMFAVPREQVVRLHASSGTT
                     GKPTVVGYTAADIDTWAGIMARSLACAGARPGDVVHNALGYGMFTGGLGFHYGAERLG
                     CTVTPMSGGQTERQIVLMGDFGANVLISTPSYALNLAEVAEKMGVSLPASTLRVGVFG
                     AEPWSETMRDELDRRLGIASVDSYGLSEIIGPGVAMECHLRVGLHGWEDHFLFEIVDP
                     ETLEPLPMGAEGELVITSLTKQALPMLRYRTRDITRLTDEPCACGRTHLRILRVTGRN
                     DDMLIIRGVNVYPSQIEAMLVGFPGIAPHYQLLISRQGSMDHLTVEVEADQPASENER
                     EYLANKVRHHLKSMVGVSCEVLVRLPGEIPRSQGKAVRVRDLRKE"
BASE COUNT          558 a         1170 c         1223 g          619 t
ORIGIN      
        1 cgtggctggt gaccacgccg ccgcgctggg ccatgccggc gacttccgac ttcttgacgt
       61 ccatgccctt ggcgatggcg gtctgggaca ggatctcggc ggcggtcatg acgccctggc
      121 cgccgatgcc gcagaccagg atgttggtga tgatgttgtc gctcatgctt ctttccctca
      181 cgccaccgca accgggccca tctgcacgat ggccttgggt ccgcacgaat cgacgcacat
      241 gtggcagccg gtgcacatgg cggtgtcgat ctgggtgaac ttcaggtcgg cctcgacgcc
      301 gttcttgcgg gtttccttgg cggtgcgcga cacggtgatg gccgggcagc cgacgttgat
      361 gcaattgccg cagccggtgc aatcctcgtc gatcaccttg tacggcttca tcttggcgta
      421 gaattccgac aagacgcagg gctggttggt gatgatgacg ctgggctcgg gcaccgccat
      481 ctcgtccttg atggccttga acagcaccgg cagcttgtag ggatcgacgg tcttgatgcg
      541 ctcgggcttg acgcccaggg cctcgcacag cttggcgaag tccacgcgcg gcgcctcgtt
      601 gccgtgcagg tccttgccgg tgccggcatg gtgctggccg ccggtcatgc cggtcgagcg
      661 gttgtcgagc agcagcgtgg tgacgttgcc gcggttgtag acgatgtcca gcatgccctg
      721 catgcccatg tgcaggaagg tggaatcgcc gatcaccgaa atgacggcct tgtccttggt
      781 ctcttccgtg cgggccttgt ccatgccgag cgcgatgccc atggacgcgc ccatggaaat
      841 ggtggtgtcg agcgcgttcc acggctggcc ggcgcccagg gtgtagcagc cgatgtcgcc
      901 cgagatctgc accttcttgc gcaggcgcga caggcagtaa tacacgccca tgtgcgggca
      961 ggccgggcac atggtcggcg ggcgggggaa cgggtcgtac ttgggatagg tgctggtggg
     1021 cggcggctcc tcgccgcgca ggcgatagat cgccgggatc agcacggcgg gcgacagctc
     1081 gcccaggcgg ggcaggatgt ccttgccgtg gatgtccagc atgccggcgg ccttcagctc
     1141 gccttccatc agcggctcgg tctcttccac caccaccagg cgatcgacct tggccttgaa
     1201 ggcgcggatg gcctcgaccg gcagcgggta ggtgaagccc agcttgagga cgggcgaatc
     1261 ggggaagctt tcgcgcacgt gctggaaggc cgggcccgag gtgacgaagc cgatacggcg
     1321 gtcggaaccg tcgtcgacga cgttcaggtc agacgcctcg gcggccttgc gcaggctgtc
     1381 ctcgcgggcg atctgcttgg gcagcatgcc cttggcgttg gcgggggtca tgacccagcg
     1441 ggcggcgttg agcacgaagc cggccgacgg cttctcgctg cgctcgccga cggtcaccat
     1501 ggccttgacg tggcagacgc gggtggtcag gcgcacgatg acgggggtgt tgtaggcctc
     1561 ggacaggtcg aaggcgacct tgaccatgtc caaagcttcc tggctgtcgg ccggctccag
     1621 caccgggacg tgggcgaagc ggccccaata gcgcgagtcc tgctcgttct gcgacgacga
     1681 caggccgacg tcgtcggcca ccgcgatgac caggccgccg accacgccgg ccagggtctg
     1741 ggtcatgaag gcgtcggagg cgacgttcat gcccacgtgc ttcatggcgc agaaggcccg
     1801 agcgcccgac atcgaggcgc cgatggccac ttccatcgac accttctcgt tcaccgacca
     1861 ttccgaatag aggtcgggat agagcgacag gcattccagg atttcggtgg acggcgtgcc
     1921 cggataggcg gcggcgacgc ggcaacccgc ctcccacacg cctcgcgcga tggcatcgtt
     1981 gccggaaagc agcaggcggt cgttggcctt cgcctggacg gcagcggaca tggaaactcc
     2041 ctcgtcttac gtcggtattt tggcccgcgg gtggtggcag ccccccgcga gggctggacc
     2101 ctaccatctt tcggataggg tccggaaggg gccttgacga tggtcaggga gccattgccc
     2161 ccgcagccat tatggattat gtccggccat ccggtgtgga gaggagagtg ggctatgacc
     2221 gcgctggcgg ccaattcctg gatgtacgcg cccgagatcg agcgcatgga ccgcgaccaa
     2281 ttggccgcgc tgcagctcga ccgcttgaag gcgacactcg cccatgccta cgccaacgtg
     2341 ccccattacc gcgccgcctt cgacgccaag ggcgtcaggc ccgaggacct gacgtcgctg
     2401 gccgacctgg cgcgcttccc gttcacggtc aagtcggacc tgcgcgacaa ttatcccttc
     2461 ggcatgttcg cggtgccgcg tgagcaggtg gtgcggctgc acgccagttc gggcaccacc
     2521 ggcaagccca ccgtggtcgg ctacaccgcc gccgacatcg acacctgggc cggcatcatg
     2581 gcgcgctcgc tggcctgcgc cggcgcccgc cccggcgacg tcgtccacaa cgcgctgggc
     2641 tacggcatgt tcaccggggg cctgggcttc cattacggcg ccgagcggct gggctgcacc
     2701 gtcacgccca tgtcgggcgg ccagaccgag cggcagatcg tgctgatggg cgatttcggg
     2761 gccaacgtgc tgatctcgac tccgtcctat gctctgaacc tggccgaggt ggccgagaag
     2821 atgggcgtca gcctgccggc ctcgacgctg cgggtcggcg tgttcggggc cgagccgtgg
     2881 tccgagacca tgcgcgacga actggaccgc cgcctgggca tcgcctcggt ggattcctat
     2941 ggcctgtccg agatcatcgg ccccggcgtc gccatggaat gccacctgcg ggtaggcctg
     3001 cacggctggg aagaccattt cctgttcgag atcgtcgatc ccgagacgct ggagccgctg
     3061 cccatgggcg ccgagggcga actggtcatc accagtctga ccaagcaggc gctgcccatg
     3121 ctgcgctacc gcacccgcga catcacccgg ctgaccgacg aaccctgcgc ctgtggccgc
     3181 acccatctgc gcatcctgcg ggtgacgggg cgcaacgacg acatgctgat catccgtggc
     3241 gtcaacgtct atcccagcca gatcgaggcc atgctggtgg gcttccccgg cattgcgccg
     3301 cattaccagt tgctgatcag ccgccagggg tccatggacc acctcaccgt cgaggtcgag
     3361 gccgaccagc ccgccagcga gaacgagcgc gaatacctcg ccaacaaggt ccgccaccac
     3421 ctgaagtcca tggtcggtgt gtcgtgcgag gtgctggtcc gcctgcccgg cgagatcccg
     3481 cgcagccagg gcaaggcggt gcgggtcagg gatttgcgga aggaataggc tcgctacgct
     3541 cggcccccac cccggcgaaa attaagccct
//
LOCUS       DATIKR010000565         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_189582, whole genome shotgun sequence.
ACCESSION   DATIKR010000565 DATIKR010000000
VERSION     DATIKR010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189582"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..988
                     /locus_tag="VLL76_08790"
     CDS             <1..988
                     /locus_tag="VLL76_08790"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV29644.1"
                     /translation="DLLKSFVHSSEGSNPFEHTVARLSELKPLALLAKTGARRVVNDL
                     ANHVSAEPAHQKRLVKAGYLSSYTVPIFHKATFHGFIFFNSFQAEYFAPPVVSRLKPV
                     AEVVALQTIMELDAVRMIQASVRTVRQISRARDEETGAHLERMARYSRLIAQRLAPRR
                     GMSDEWVEFLFQFAPLHDVGKIAVPDQILFKPDRLTPAEFDIMKGHVSKGMEIVDTMS
                     ETFRLKGSALISILRNVVGHHHEAIDGSGYPKGLSGDAVSLEGRIVAVADVFDALTSA
                     RPYKQAWSVEDALAFLQAQAGKKFDPEAVEVLVKSGAAIADIRRQFVDSESY"
     gene            1043..>1783
                     /gene="mepA"
                     /locus_tag="VLL76_08795"
     CDS             1043..>1783
                     /gene="mepA"
                     /locus_tag="VLL76_08795"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HSV29645.1"
                     /translation="MRVLAASVGLSVLMLASACAQAGPAEQWSRIRVPAAGPVEAIGS
                     PAAGCLKGAVALPPEGEGYQALRLERNRFYGHPRTVNFVRALGAAAKADGLGMLLIGD
                     MSQPRGGPMAYGHGSHQTGLDVDVWFRLEQAPLPPEERERPSGVSMVKANAVNGSTWS
                     AAHLRLLEIAATTPEVDRIFVNPAIKAAACREATGDRAWLGKLRPWWGHDEHFHVRLA
                     CPAGDAGCVPQAPVPEGDGCGGELASWSG"
BASE COUNT          263 a          613 c          618 g          289 t
ORIGIN      
        1 cgacctgctg aaatccttcg tccattccag cgagggctcg aacccgttcg agcacacggt
       61 ggcgcggctg tccgagctga agcccctggc gctgctggcc aagaccgggg cgcggcgggt
      121 ggtcaacgac ctcgccaacc acgtcagcgc cgagccggcg caccagaagc ggctggtcaa
      181 ggccggctac ctgtccagct acacggtgcc gatcttccac aaggccacct tccacggctt
      241 catcttcttc aattcgttcc aggccgagta tttcgccccg ccggtggtgt cgcggctgaa
      301 gccggtggcc gaggtggtgg cgctgcagac catcatggaa ctggacgcgg tgcgcatgat
      361 ccaggcctcg gtccgcaccg tgcgccagat cagccgcgcc cgcgacgagg agaccggcgc
      421 ccatttggag cgcatggccc gctattcccg cctgatcgcg cagcggctgg cgccgcgccg
      481 gggcatgtcg gacgaatggg tcgaattcct gttccagttc gcgccgctgc acgacgtcgg
      541 caagatcgcg gtgcccgacc agatcctgtt caagcccgac cgcctgactc cggccgagtt
      601 cgacatcatg aaggggcacg tttccaaggg catggaaatc gtcgacacca tgtccgagac
      661 cttccgcctc aagggctcgg cgctgatcag catcctgcgc aacgtggtcg gccaccatca
      721 cgaggccatc gacggcagcg gctatcccaa gggcctgtcc ggcgacgcgg tgtcgctgga
      781 gggccgcatc gtcgcggtgg ccgacgtgtt cgacgcgctg acctcggcgc ggccctacaa
      841 gcaggcgtgg agcgtcgagg acgccttggc cttcctgcag gcccaggccg gcaagaagtt
      901 cgatccggaa gcggtggagg tgctggtcaa aagcggtgcc gccatcgccg acatccgccg
      961 tcagttcgtg gacagcgagt cctattgacc gtcgcttaac cgccttgggc gtattagtgt
     1021 cgtcatcgca ggaggtggcg gcatgcgcgt tttggcggct tcggttggtt tgtccgtgtt
     1081 gatgctggcg tcggcttgcg cccaggccgg cccggccgag caatggagcc gcatccgggt
     1141 gcctgccgcc ggtcccgtcg aagccatcgg ctcgcccgcc gccggctgcc tcaagggcgc
     1201 cgtggcgctg ccaccggagg gcgagggcta tcaggcgctg cggctcgaac gcaaccgctt
     1261 ctacggccat ccccgcaccg tcaacttcgt gcgcgcgctg ggcgccgccg ccaaggcgga
     1321 cgggctggga atgctgttga tcggcgacat gtcgcagccg cgcggcggcc ccatggccta
     1381 cgggcatggc agccatcaga ccggcctcga tgtcgatgtg tggttccgcc tggaacaggc
     1441 gccgttgccg cccgaggagc gcgagcgtcc gtccggggtg tccatggtca aggccaacgc
     1501 cgtcaacggc tccacctgga gcgccgccca tctgcgcctg ttggagatcg cggcgacgac
     1561 gcccgaggtc gaccgcatct tcgtcaaccc cgccatcaag gccgccgcct gccgcgaggc
     1621 caccggcgac cgggcctggc tgggcaagtt gcggccgtgg tggggccatg acgagcattt
     1681 ccacgtcagg ctggcgtgcc cggccggcga tgccggctgc gtgccgcagg cgccggtgcc
     1741 ggaaggcgac ggctgcggcg gcgaactggc gtcgtggtcg ggc
//
LOCUS       DATIKR010000566         1737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_129141, whole genome shotgun sequence.
ACCESSION   DATIKR010000566 DATIKR010000000
VERSION     DATIKR010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129141"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLL76_08800"
     CDS             <1..276
                     /locus_tag="VLL76_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HSV29646.1"
                     /translation="GQLQLAVFPNEAGLEARGDNLFMETPASGAAQVANPGSAGYGTL
                     LQGFLETSNVNVVAEITNLISAQRAYEMNSRVIKTSDEMLGTVNQMK"
     gene            287..1246
                     /gene="flgA"
                     /locus_tag="VLL76_08805"
     CDS             287..1246
                     /gene="flgA"
                     /locus_tag="VLL76_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HSV29647.1"
                     /translation="MKRILLAALLALALSGQAMAATLPAQLKSAVSLEGDVIRLGDIW
                     DNLAADKADLAIAAAPQPGKRISLEARWLAAVAQSYGIDWRPNTAFDRVVLERAGQTV
                     DPRLIESQIREALALEGLPAGSDFEISNRHALAITIPANANAAVGVKDVVMDQRTNRF
                     SATVEVPAGSPAATRVKLTGRVFTTTRVPVLSHAMNRGEVITERDIEWAEVREEQVRR
                     DLIADPSQMIGLEPRWTVRQGVPLRAADLQRPVLVARNSHVTLVLKTPFMTLTAQGKA
                     IEDGGKGDTIRVTNLQTKRTIEGKVDGPGTVSVASNGPRLLAN"
     gene            1270..>1737
                     /locus_tag="VLL76_08810"
     CDS             1270..>1737
                     /locus_tag="VLL76_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HSV29648.1"
                     /translation="MTAFTARTALRAATIVAAMASLTACNALTRMSEVGSGPQISAIQ
                     NPTQKAGYQPVTMPMPNPVAPPQNANSLWRPGSRAFFKDQRAKEIGDILTVAVSIDES
                     ASFETTLERKRDADESTGITNLMGFENSLKKVLPDTVNPAALLGATGTSNNTNS"
BASE COUNT          309 a          667 c          538 g          223 t
ORIGIN      
        1 ggccagctcc agctggcggt gttccccaac gaggccggcc tggaagcgcg cggcgacaac
       61 ctgttcatgg aaaccccggc ctcgggcgcg gcgcaggtcg ccaatcccgg ctcggccggc
      121 tacggcacgc tgctgcaggg cttcctcgag acctcgaacg tcaacgtcgt ggccgagatc
      181 accaacctga tcagcgccca gcgcgcctat gagatgaact cgcgggtcat caagacctcg
      241 gacgagatgc tcggcaccgt caaccagatg aagtgaggat aaggccatga agcgcatcct
      301 cctcgccgcc ctgctcgccc tggccctgtc gggccaggcc atggccgcca ccctgccggc
      361 gcagttgaag agcgcggtgt cgctggaagg cgacgtcatc cgcctgggcg acatctggga
      421 caacctggcc gccgacaagg ccgacctggc catcgccgcc gcgccgcagc cgggcaagcg
      481 catctcgctg gaagcccgct ggctggccgc cgtggcgcag tcctacggca tcgactggcg
      541 ccccaacacc gccttcgacc gcgtcgtgct cgagcgggcc ggccagaccg tcgatccccg
      601 cctgatcgaa agccaaatcc gcgaggcgct ggcgctggaa ggcctgcccg ccgggtccga
      661 cttcgagatc tcgaaccgcc atgccctggc gatcaccatt cccgccaacg ccaatgccgc
      721 cgtcggcgtc aaggacgtgg tgatggacca gcgcaccaac cgcttctcgg ccaccgtcga
      781 ggtgccggcc ggctcgcccg ccgccacccg cgtcaagctg accggccgcg tcttcaccac
      841 cacccgcgtc ccggtgctgt cgcacgccat gaaccggggc gaggtcatca ccgagcgcga
      901 catcgaatgg gccgaggtgc gcgaggaaca ggtgcgccgc gacctgatcg ccgacccgtc
      961 gcagatgatc ggcctcgagc cgcgctggac cgtccgccag ggcgtgccgc tgcgcgccgc
     1021 cgacctgcag cgcccggtgc tggtggcccg caattcccac gtcacgctgg tcctgaagac
     1081 cccgttcatg acgctgaccg cccaaggcaa ggccatcgag gatggcggca agggcgacac
     1141 catccgcgtc accaacctgc agaccaagcg caccatcgag ggcaaggtcg acggcccggg
     1201 caccgtgtcc gtcgcgtcga acggcccgcg cctcctcgcc aattgatccc ggcataaggg
     1261 aacacggaca tgaccgcctt caccgcccgc accgccctcc gcgccgccac catcgtggcc
     1321 gcgatggcct cgctgaccgc ctgcaacgcc ctgacccgca tgtccgaggt cggctccggg
     1381 ccgcagattt cggccatcca gaacccgacg cagaaggccg gctaccagcc ggtcaccatg
     1441 ccgatgccga acccggtggc gccgccgcag aatgccaact cgctgtggcg gccgggctcg
     1501 cgcgccttct tcaaggacca gcgcgccaag gaaatcggcg acatcctgac cgtggccgtc
     1561 agcatcgacg aaagcgccag cttcgagacc acgttggagc gcaagcgcga cgccgacgaa
     1621 tccaccggca tcaccaacct gatgggcttc gagaacagcc tgaagaaggt gctgcccgac
     1681 acggtcaacc ccgccgccct gctgggcgcc accggcacca gcaacaacac caattcg
//
LOCUS       DATIKR010000567         1650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_93511, whole genome shotgun sequence.
ACCESSION   DATIKR010000567 DATIKR010000000
VERSION     DATIKR010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93511"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..624)
                     /locus_tag="VLL76_08815"
     CDS             complement(241..624)
                     /locus_tag="VLL76_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HSV29649.1"
                     /translation="MAADPARLAARQRGRRAESLAALWLRLKGYRILARGSVTGRGTG
                     AGEIDIVARRGRVVAFVEVKARPSRDEALEAITAAQRRRIMRAAETFLSRHPELAGCD
                     MRFDAVLVVPNRLPRHISDAWRMDA"
     gene            complement(624..1445)
                     /gene="rsmI"
                     /locus_tag="VLL76_08820"
     CDS             complement(624..1445)
                     /gene="rsmI"
                     /locus_tag="VLL76_08820"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HSV29650.1"
                     /translation="MATPIGNMGDITLRAIEVLRGADVIACEDTRVTGKLMTRLGLDR
                     PLFSYHEHNAERAGAQLLAKLRDGKSVALASDAGTPLVSDPGARLVKACVAEGLAVTA
                     LPGASAVLTALQLSALPAERWLFAGFLPSKATQRRQALREVEHVPATLVFYESPNRLA
                     DSLADMAAVLGGRDAAVARELTKRHEEVVRGTLFDLANRYAEAGAPKGEVVVVVGPPL
                     AEARPGADDLESRLRRAVDGGASVKDASALVAAETGHPRRDVYALALKLFRGGTE"
BASE COUNT          230 a          587 c          602 g          231 t
ORIGIN      
        1 gtgattgatc tcggtgcgga tcttgacgtc gtcgacggca ccgtcgaggc cgcgctcctc
       61 ggcggcggcc acgccggcgg tggcgcccgc gccgatcagg gcgccggcgc agcccgaaag
      121 cgaagaagcg gcgcacagca tcgcggcggc ggcgaaggcg ggacgaaact tggtcacggc
      181 gatagtcctc gaaagcaggc ggatggtggg cgccagtcta gcggccggtg ccgcaccccc
      241 tcaagcatcc atccgccagg cgtcggaaat gtggcgggga agccggttgg gcaccaccag
      301 cacggcgtcg aagcgcatat cgcagccggc cagttcgggg tggcgggata ggaaggtctc
      361 ggccgcccgc atgatgcggc ggcgctgcgc tgccgtgatg gcctccagcg cctcgtcccg
      421 gctgggtcgc gccttgacct cgacgaaggc caccacgcgg ccgcggcggg cgacgatgtc
      481 gatctcgccg gcgccggtgc cgcgcccggt gaccgagccg cgcgccagga tgcggtagcc
      541 cttgagccgc agccacaggg ccgccaggct ttcggcgcgc cggccgcgct gccgggcggc
      601 caggcgggcg gggtcggcgg ccattactcg gtaccgccgc ggaacagctt cagcgccagg
      661 gcatagacgt cgcggcgggg gtggccggtc tcggccgcca ccagggcgct ggcatccttg
      721 accgaggcgc ccccgtccac cgcccgccgc aggcggcttt ccaggtcgtc ggcgccgggc
      781 ctggcttccg ccagcggcgg gccgaccact accaccacct cgcccttggg ggcgccggct
      841 tcggcatagc gattggccag gtcgaacagg gtgccgcgca ccacctcttc atggcgcttg
      901 gtcaattcgc gcgccaccgc cgcgtcgcgg ccgcccagca cggccgccat gtcggccagg
      961 gaatcggcca gccggttggg cgattcatag aacaccaggg tggccggtac atgctcgacc
     1021 tcgcgcaatg cctggcgccg ctgggtcgcc ttcgacggca ggaagccggc gaacagccag
     1081 cgttcggccg gcagcgccga caattgcagc gccgtcagca ccgccgaggc gcccggcaag
     1141 gcggtgaccg ccaagccctc ggcgacgcag gccttgacca ggcgggcgcc ggggtcggac
     1201 accagcggcg tgccggcgtc ggaggccagc gccaccgact tgccgtcgcg cagcttggcc
     1261 agcaactggg cgccggcgcg ttcggcattg tgttcgtgat aggaaaacag cggccggtcc
     1321 aggcccagcc gggtcatcag cttgccggtg acgcgggtgt cctcgcaggc gatgacgtcg
     1381 gcgccgcgca gcacctcgat ggcgcgcagc gtgatgtcgc ccatgttgcc gatcggcgta
     1441 gccaccaagt acaggccggg cgccggttta cttcccagcc gctccggtct accctcgccg
     1501 tcgctttcga ccaaggattg ggagggttcc gttgcgccgg tttctttcgc gccgtgtcgc
     1561 tgccttgcca ttcgtcgcgg ccctgctggt aagcggttgt cagcaggcag acttaccatc
     1621 ctgggcgggc ggaaccaagc cgcctgcgga
//
LOCUS       DATIKR010000568         3876 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_117219, whole genome shotgun sequence.
ACCESSION   DATIKR010000568 DATIKR010000000
VERSION     DATIKR010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117219"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1353)
                     /locus_tag="VLL76_08825"
     CDS             complement(<1..1353)
                     /locus_tag="VLL76_08825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSV29651.1"
                     /translation="MKKPTAHKSLAPITDSSPVVRDALAIIRSEPTAYKVAVLQDRLG
                     LSYSDAGSVFDFLIEHGYITLQAGPKGTDYAKVLGPALDLLRTPTSDSATADARQYPD
                     LTWYIDEAGRRWKATSYVYETTSGVADEWTVTLEGKGSKSGFSVGVPREAAQEWEEYW
                     GSQTRFGSRELAQDAANRVETCGGRNQSESDAQSTLAPPPAAKAAQDPMRRPVNARLT
                     DVALDQIDVTANNRPVEDQEYLARLGASIRELGLLQPVVLHKAPGGSNGHAYRLIAGG
                     HRIEAARMAGETTISAMVYSGGDGRWEAKARLAENVQKLDLTPLQLAEEFGRGRDAGM
                     TVAEIAADCNVSDDTVRRHLHLLRLCYAVRMLVDRGRLPIHQAEIISTVGDTDRQIAL
                     ASATCKLAWDPKAADWAPAGDYDWKRQSYKPGKEAGDVNAREYVLPTGDLRKAASAVL
                     L"
     gene            complement(1402..2151)
                     /locus_tag="VLL76_08830"
     CDS             complement(1402..2151)
                     /locus_tag="VLL76_08830"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF039181.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative metallopeptidase"
                     /protein_id="HSV29652.1"
                     /translation="MMPETELANLTKCRRATPNVLCLSRPQIEAGAKDYDLAAADLRS
                     IAQNLIDTVAEHRHLKSAMVLLVLERCERTAEKLDQGARVRIGHARKANGLARLLSAG
                     QLVGTDGEQAENPPADWVVTLSEDFLRLAGYRGGEEGGIRKAVALLDHELLHCGARTA
                     GMWVAAADADGVAETLGEDFIEICRDVRDSRDRVLVRHYQRDKDTRNYVWVLRKHDIE
                     EFVGVAGRHGRWSGDISRLVDVVVQGETARS"
     gene            complement(2284..3372)
                     /locus_tag="VLL76_08835"
     CDS             complement(2284..3372)
                     /locus_tag="VLL76_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29653.1"
                     /translation="MDFLLRIERACWLGLAMPRRRGERNDGPGSDRQLERKLAEIRAE
                     MDRRTVDRTRKGSRMGMEHGISARRIASVGGSLRPGRDGLAGVDHTPVTAEDADQYNG
                     YCRYPACIECEDVREGLCPEHRNAALAGDAKAITILDAWRRVHQVGDLAEKDRQAERH
                     AEFRRYAHPPAAKGEIDRRGTEGTEKKPTNQPPAAATRKEETSMVNPRGTENTEASSN
                     AKCGYCKLRPAKCRGLCDACYVYAKQGRDETKRAAIQALMTPATPHGDRSRKQDGTHR
                     GRCQAISGEKPASAAIAPSSAPLRSSELPHAMVIRQVLAALGMTGGEFLVWAPRGDGA
                     MVLNPANGRAAEIRHDGLVKALVLAEAE"
     gene            complement(3395..3577)
                     /locus_tag="VLL76_08840"
     CDS             complement(3395..3577)
                     /locus_tag="VLL76_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29654.1"
                     /translation="MTAEKLSRLVFIDEAPWPLEYRVRIGMTVHAMTREIGAARAVQE
                     YLVREIESGRMRSDGE"
     gene            complement(3574..3726)
                     /locus_tag="VLL76_08845"
     CDS             complement(3574..3726)
                     /locus_tag="VLL76_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29655.1"
                     /translation="MEPNAWMDGLRATVQTLVMSVLIVAICWGLLTLVYSTHKRPTGG
                     RREWIG"
BASE COUNT          480 a         1406 c         1239 g          751 t
ORIGIN      
        1 cagcagcacc gcggatgccg ccttccgcag gtcgcccgtg ggcagcacgt attcccgggc
       61 gttcacgtcg ccggcttctt tgcccggttt gtagctttgc ctcttccagt cgtagtcgcc
      121 ggccggggcc cagtcggcgg ccttggggtc ccacgccagc ttgcacgtcg ccgaggccag
      181 ggcgatctgg cggtccgtgt cgccgacggt ggagatgatc tcggcctggt ggatcggcag
      241 ccgcccgcgg tccacaagca tccgcacggc atagcaaagc cgcagcaggt gcaggtggcg
      301 gcggacggtg tcgtcgctga cgttgcagtc cgccgcgatc tcggcgacgg tcatccccgc
      361 gtcgcggccg cggccgaact cctcggccag ttgcagcggc gtaaggtcga gtttctggac
      421 gttctcggcg aggcgcgcct tggcctccca gcggccgtcg ccgcccgaat agaccatggc
      481 ggagatcgtc gtctctccgg ccattcgggc cgcctcgatg cgatggccgc cggcgatcag
      541 ccggtaggcg tggccgttgc tcccgcccgg cgctttgtgc agcaccaccg gctgcagcag
      601 ccccagttcg cggatcgacg cccccagcct ggcgagatat tcctggtcct cgaccggccg
      661 gttgttggcc gtgacgtcga tctggtcgag cgccacatcc gtcagccggg cgttgaccgg
      721 ccgccgcatc ggatcctgcg cggctttcgc cgccggcggc ggggcgagcg tgctttgggc
      781 gtcgctttcg gattggttgc gacctccgca cgtctccact cggttcgcgg cgtcctgtgc
      841 cagctcgcgg cttccaaacc gcgtctggct gccccagtat tcctcccact cctgcgccgc
      901 ctcgcggggc acgccgacgc tgaacccgct cttggacccc ttcccctcca gcgtcaccgt
      961 ccattcgtcg gcaacccccg acgtcgtctc gtaaacatag ctggtggcct tccatcgtct
     1021 gcccgcctcg tcaatgtacc aggtcaggtc ggggtactgg cgggcgtcgg cggtggctga
     1081 gtcactggtg ggtgtgcgga gaaggtcgag ggccgggcca agcaccttgg cgtagtcggt
     1141 gcccttgggc cccgcctgca gcgtgatgta gccgtgttcg atgaggaaat caaagacgct
     1201 ccccgcgtcg ctgtagctca gccccagtcg gtcctgcagg accgcgacct tgtacgcggt
     1261 cggctccgaa cggatgatcg ccagggcgtc gcgaacgacc ggcgatgagt cagtgatcgg
     1321 ggcgagtgat ttgtgcgcag tgggtttctt catggacgtt cttcctttcg tgttgtcccc
     1381 gttggggacg gttgtttgcg gttacgaacg cgcggtctcg ccctggacga ccacgtcgac
     1441 caggcggctg atgtcgccgc tccagcggcc gtggcggccg gcgacgccga cgaactcctc
     1501 gatgtcgtgc ttgcgcagga cccagacgta gttccttgtg tccttgtctc gctggtagtg
     1561 ccggacgagg acgcgatccc gcgagtcgcg aacgtcccgg cagatctcga tgaagtcctc
     1621 gccgagcgtc tcggcgaccc cgtcggcgtc ggccgcagcc acccacatcc cggcggtccg
     1681 ggccccgcag tgcagcagtt cgtggtccag cagggcgacc gctttgcgga tcccgccctc
     1741 ctcgccgccg cggtagccgg ccaggcggag gaaatcttcg ctgagcgtca cgacccagtc
     1801 cgccggcggg ttctccgcct gctcgccgtc ggtccccacg agctggccgg ccgagagcag
     1861 ccgggccagg ccgttggcct tgcgggcgtg gccgatgcgg acgcgggccc cctggtcgag
     1921 cttctcggcg gtcctctcgc agcgttccag gaccagcagc accatggcgc tcttcaggtg
     1981 gcggtgctcg gccacggtgt cgatgaggtt ttgcgcgatc gaccgcaaat cggccgccgc
     2041 caggtcatag tcctttgccc ccgcctcgat ctgcggccgg ctcaggcaga gcacgttggg
     2101 cgtcgccctg cggcacttgg tcaggttcgc gagttccgtc tcgggcatca tctgcgttac
     2161 tccgttggtt ggttcaatgc ccacgggacg caacccatgg gcttcgactc tcaaaccgcg
     2221 gccgtcccgg gggtcacgtg cccccggcaa cggcgggcac ggccgcgatc gtcactccgg
     2281 tggttactcc gcctcggcca gcaccagtgc cttgaccagg ccgtcgtggc ggatttccgc
     2341 cgcacggccg ttggcgggat tgaggaccat cgccccatcg ccccgcggcg cccagaccag
     2401 aaactccccg cccgtcatcc ccagcgccgc cagcacctgg cggatcacca tcgcgtgcgg
     2461 aagttcgctt gaccgcagag gcgcggagga aggagcaatc gctgcgcttg ccggcttttc
     2521 gccgctgatc gcctggcaac gtccgcggtg tgtgccgtcc tgtttgcggc tccgatcgcc
     2581 atgcggcgtt gccggcgtca tcaacgcctg gatggccgct cttttcgtct cgtcgcgacc
     2641 ttgtttggcg taaacgtagc acgcgtcgca aaggccccga cattttgccg ggcgcaactt
     2701 gcagtagccg cactttgcgt tgcttgacgc ctctgtgttc tctgtgcctc tggggttcac
     2761 catggacgtt tcttcctttc gtgttgccgc cgccggcggc tggttcgttg gttttttctc
     2821 tgtgccctct gtgcctctgc ggtcaatttc ccccttcgcc gccggcggat gggcgtagcg
     2881 acgaaactcg gcatgccgct ccgcctggcg gtctttctcc gccagatcgc ccacctggtg
     2941 gacgcggcgc caggcgtcga gaatcgtgat cgccttggcg tcccccgcga gggccgcgtt
     3001 gcgatgctcc gggcaaagcc cctcccgcac atcctcgcac tcgatgcagg cggggtaccg
     3061 gcagtagccg ttgtattgat cggcatcctc ggccgtgacc ggcgtgtggt cgaccccggc
     3121 aagcccgtcg cggccgggcc gcaggctgcc gcccacgctc gctattcgcc tcgccgaaat
     3181 gccatgctcc atgcccatcc gtgagccttt ccgtgtgcgg tcaaccgtcc gccgatccat
     3241 ctccgctctg atctccgcca gcttccgctc cagttgccgg tcgcttcccg gcccgtcgtt
     3301 ccgctcgccc cgccgccgcg gcatcgccag gccgagccag cacgcccgct cgatgcggag
     3361 caggaaatcc atgctccgtt gtggcaggcg gcggttactc tccatccgac cgcatccgtc
     3421 ccgactcgat ctcgcggacc aggtactcct ggacggccct ggccgcgcca atctcccgcg
     3481 tcatcgcgtg caccgtcatt ccgattcgca ctcggtactc gagcggccag ggcgcttcgt
     3541 cgatgaagac cagccgcgat agcttctccg ccgtcacccg atccactccc gccggccccc
     3601 cgtcggccgc ttgtgcgtgc tgtagaccag cgtcagcagt ccccagcaga tcgcgacgat
     3661 cagcaccgac atcaccagcg tctgcaccgt cgcccgcagc ccgtccatcc atgcgttggg
     3721 ttccatcggt ttctcctttt tggggtccgt ggcagaacat tccgtctcct atccggccct
     3781 tgttggcagc ggcagcccca tcgccgccag tcgccgcatc gccgccgcgt ggcggctctc
     3841 ggtgttcact cttcccgccg ggcggcaggg cggctc
//
LOCUS       DATIKR010000569         4546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_56509, whole genome shotgun sequence.
ACCESSION   DATIKR010000569 DATIKR010000000
VERSION     DATIKR010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56509"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VLL76_08850"
     CDS             complement(<1..240)
                     /locus_tag="VLL76_08850"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSV29656.1"
                     /translation="MNEIHKGHPEVTEELRQEFLDEANEVLQALDVSLDAGRHGHQDE
                     ADIVKAFRRASMQLRGQAANLGMRPLSTVAHRLNDY"
     gene            374..568
                     /locus_tag="VLL76_08855"
     CDS             374..568
                     /locus_tag="VLL76_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29657.1"
                     /translation="MPQPNQPNQPTEHPRPHPGDDAAPGTPGTGEDICRQCNGTGKVD
                     GRICDNCDGTGVVIEGIGGA"
     gene            complement(590..1072)
                     /locus_tag="VLL76_08860"
     CDS             complement(590..1072)
                     /locus_tag="VLL76_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29658.1"
                     /translation="MQHQDLDRIRGIKSLDPGFARQTKLSRSERLNRWADLLDSQVGR
                     PLRALEDVEYVSPGVRRELRKDDSPLSIAFADPLLRADGLASDRLGDAMDYFGLSERQ
                     AHWLLCDCHYGGRMTASEVSVRVRDEARPLYDILRPQLWAGLTGAAVLAGAVMTVAVL
                     "
     gene            complement(1238..1705)
                     /locus_tag="VLL76_08865"
     CDS             complement(1238..1705)
                     /locus_tag="VLL76_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015926976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HSV29659.1"
                     /translation="MPPTRFLCDEMLTGLGRWLRAAGHDTLLAPKGAADGRLVALAGI
                     EGRLLLTRDRAILDHKAAAGIALVLEADGLDGWAVELRRRMGLDWTMAPFTRCLVCNT
                     CLTPARAEHVAAVPEDSRGLGPVQWCVQCRKPYWRGGHVRRMEARLARWVGGA"
     gene            1789..4290
                     /locus_tag="VLL76_08870"
     CDS             1789..4290
                     /locus_tag="VLL76_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV29660.1"
                     /translation="MASEQAIERIIQREILSCGPQTSILEAARTMADARRSSIIVVEG
                     GKPVGIWTEHDALSIDFSDSGCCTRPISTVMSAPVKTIHCQTSIGDAGLRFQMERVRH
                     FVVVNDGGRPMGIISQSDVILRHGVEHFLVLRNVGSAISRPMTSIAAGCTLKEAVAQL
                     NAARVDAAVVMGEHGEEPGIVTERDIVRVVSRAETLPATVGDIASRPLITMRDDDSLL
                     AARNLLEEKGIRHVGVADTEGRLKGLLSFSDILATLQYEYVQRLDEALRERDEALLRS
                     RKDLHLARKVIEASLDAVLICNPQGLIEFVNPAFTQLTGYAAEEVLGKAPSILKSGRH
                     DQAFYKEMWERLATDGVWQGEIWNKRKDGEIYPEWLTINVIRDDSGAITQYASIFTDI
                     TERKRTEERIKNLAYFDVLTGLPNRRLFTDRLQVAIANAHRHGGRLAIMFLDLDLFKR
                     INDTLGHGIGDRVLVETAQRIGHCIREGDTVARLGGDEFVVLLPELDHVEDVAKLAER
                     VITHVKQPFLVDGHELYVTTSIGIAVYPDDGTSHETLVKNADTAMYRAKDLGRNSYQL
                     YTPAMNARSFERLAMESSLRHALTRHEFILAYQIKADLTTGRISGVEALVRWRHPDMG
                     LVSPAEFIPLAENMGLISDIGRWVLREACRQCKAWHDMGLPPVRIAVNVSALQFREDD
                     VPAMVRDALGETGLPPQYLELELTESVLMQRVDEVSQILRELRSMGVHVSIDDFGTGY
                     SSLSYLKRMPIDALKIDRSFVHDITEDGDGAEIVSTIINLAHNLKLRAVAEGVETVEQ
                     ADFLRSKGCDEIQGFLISRPVSSEDLVSLFDRDLL"
BASE COUNT          779 a         1560 c         1491 g          716 t
ORIGIN      
        1 atagtcgttg aggcggtggg ccacggtcga cagcgggcgc atgcccagat tggcggcctg
       61 gccgcgcaac tgcatggagg cgcggcggaa cgccttcacg atgtcggcct cgtcctggtg
      121 gccatggcgg ccggcatcca gtgaaacgtc cagcgcctgc agcacctcgt tggcctcgtc
      181 caggaattcc tggcgaagtt cctcggtgac ttcgggatgg cctttatgga tctcgttcat
      241 gcggtgctgg ctcctgaacc cccagcgacg ttcactgtaa cccggcccgc gtgccgcctc
      301 tagccccttt gcgtccgaaa caagggcgga ggcggatgcg tccatcgtat gagatgacct
      361 ttggaggacg cccatgcccc agcccaatca accgaaccag ccgaccgaac acccgcgccc
      421 ccatcccggc gacgacgcgg cgcccggcac gccggggacc ggcgaggaca tctgccgcca
      481 atgcaacgga accggcaagg tggacggccg catctgtgac aattgcgatg gaacgggagt
      541 ggtgatcgag gggatcggcg gcgcctgacg cgccgccgac ccatggtggt cagagcacgg
      601 ccaccgtcat gacggcgccc gccagcacgg cggcgccggt caggcccgcc cacaattgcg
      661 ggcgcaggat gtcgtagagc ggccgggcct cgtcgcggac gcggaccgat acctcgctgg
      721 cggtcatgcg gccgccgtaa tggcagtcgc acagcagcca atgggcctga cgctcggaca
      781 gcccgaaata gtccatggcg tcgcccaggc ggtcgctggc caggccgtcg gcgcgcagca
      841 gcggatcggc gaaggcgatg gacagcggcg aatcgtcctt cctgagttcg cgccgcacgc
      901 cggggctgac gtattccacg tcctccagcg cgcgcaacgg ccgcccgacc tgcgaatcca
      961 gcaggtcggc ccagcggttc aaccgctcgc tgcgcgatag cttggtctgc cgggcgaaac
     1021 ccgggtcgag gctcttgata ccccggatcc ggtcgaggtc ttgatgctgc atggggtcct
     1081 ccggtctcaa tgtcgccaaa ggcttttcgc ggcgctcgcc cgccgcttgg atggggccgg
     1141 cccgcggccc gccttcacca acaacagtcc cacgggaaaa aaggttcgat ggcgggcacg
     1201 cggcgtaagg cgtgtgggtg gagaaaaggg ggaagggtca tgcgcccccg acccaacgcg
     1261 ccaagcgggc ctccattcgg cgaacgtggc cgccccgcca atagggcttg cggcattgca
     1321 cgcaccattg caccggcccc aagccgcgcg agtcttccgg cacggcggcg acgtgctcgg
     1381 cccgggcggg ggtcaggcag gtgttgcaca ccaggcagcg ggtgaacggc gccatggtcc
     1441 aatccaggcc catgcgccgg cgcagctcga ccgcccagcc gtccaggccg tccgcctcca
     1501 gcaccagggc gatgccggcg gcggccttgt ggtccaggat ggcgcggtcg cgggtcagca
     1561 gcagccggcc ttcgatcccg gccagggcca ccagccggcc gtcggccgcg cccttgggcg
     1621 ccaacagggt gtcgtggccg gcggcgcgca gccaccgccc caggccggtc agcatctcgt
     1681 cgcagaggaa acgcgtgggg ggcatgccta ctccttttga cgggactgtt gcgcgacggt
     1741 gtgatccatt ggaaactgtg cgcaaggcat cacgattgcg aggcacgctt ggcgtcggaa
     1801 caggctatcg aacggatcat ccagcgcgag atcctgagtt gcgggccgca gaccagcatc
     1861 ctggaagcgg cgcggaccat ggcggatgcc cgccgttcgt cgatcatcgt ggtcgagggc
     1921 ggcaagcccg tcggcatctg gaccgagcac gacgcgctgt ccatcgactt ctccgattcg
     1981 ggctgctgca cccgtccgat ctcgacggtg atgagcgctc cggtcaagac catccattgc
     2041 cagaccagca tcggcgacgc cgggctcagg ttccagatgg agcgggtgcg ccatttcgtg
     2101 gtcgtcaacg acggcggccg ccccatgggc atcatcagcc agagcgacgt catcctgcgc
     2161 cacggcgtcg agcacttcct ggtgctgcgc aacgtcggct cggccatcag ccgccccatg
     2221 acctcgatcg ccgccggctg cacgctgaag gaagcggtgg cccagctcaa cgccgcccgc
     2281 gtcgacgccg ccgtggtgat gggcgagcac ggcgaggagc cgggtatcgt caccgagcgc
     2341 gacatcgtcc gcgtggtgtc gcgcgccgag accctgccgg ccaccgtggg cgacatcgcc
     2401 agccggccgc tgatcaccat gcgcgacgac gacagcctgc tggcggcccg caacctgctc
     2461 gaggaaaagg gcatccgcca cgtcggcgtc gccgataccg agggccgcct caagggcctg
     2521 ctgtcgttct cggacatcct ggcgaccctg caatacgaat acgtccagcg cctggacgag
     2581 gcgctgcgcg agcgcgacga ggcgctcttg cgatcgcgca aggatctgca tctggcgcgc
     2641 aaggtcatcg aggcgtcgct ggacgccgtg ctgatctgca atccccaggg actgatcgag
     2701 ttcgtcaatc cagccttcac ccaattgacc ggctatgccg ccgaggaagt cctgggcaag
     2761 gcgcccagca tcctgaagtc cggccgccac gaccaggcct tctacaagga gatgtgggag
     2821 cggttggcga ccgatggggt gtggcagggc gagatctgga acaagcgcaa ggacggcgag
     2881 atctatcccg agtggctgac catcaacgtc atccgcgacg attccggcgc catcacccaa
     2941 tacgcctcga tcttcaccga tatcaccgag cgcaagcgca ccgaggagag gatcaagaac
     3001 ctcgcctatt tcgacgtgct gaccgggctg cccaaccgcc gcctgttcac cgaccggctg
     3061 caggtcgcca tcgccaacgc ccaccgccac ggcggccgcc tggcgatcat gttcctggac
     3121 ctcgatctgt tcaaacgcat caacgacacc ctgggccacg gcatcggcga ccgggtgctg
     3181 gtcgagaccg cccagcgcat cggccattgc atccgcgagg gcgacacggt ggcgcgcctg
     3241 ggcggtgacg agttcgtcgt cctgctgccc gaactggacc acgtggagga tgtcgccaag
     3301 ctggcggaac gggtgatcac ccacgtcaag cagcccttcc tggtggacgg gcacgagttg
     3361 tacgtcacca cctcgatcgg catcgccgtc tatcccgacg atggcacgtc ccacgaaacg
     3421 ctggtcaaga acgccgacac cgccatgtac cgggccaagg acctggggcg gaacagctat
     3481 cagctctata ccccggccat gaacgcccgc tcgttcgagc ggctggcgat ggaatcgtcg
     3541 ctgcgccacg cgctgacccg ccacgaattc atcctggcct accagatcaa ggccgacctg
     3601 accacgggcc gcatcagcgg cgtcgaggcg ttggtgcgct ggcgccaccc cgacatgggg
     3661 ctggtcagcc cggccgagtt catcccgctg gccgagaaca tgggcctgat ttccgacatc
     3721 ggccgctggg tgctgcgcga ggcctgccgc cagtgcaagg cgtggcacga catgggcctg
     3781 ccgccggtgc gcatcgccgt caacgtctcg gccctgcaat tccgcgagga cgacgtgccc
     3841 gccatggtgc gcgacgccct gggcgagacc ggcctgccgc cgcaatacct ggaactggaa
     3901 ctgaccgaaa gcgtgctgat gcagcgcgtc gacgaggtct cgcagatcct ccgggaattg
     3961 cggtccatgg gcgtgcatgt gtcgatcgac gatttcggca ccggctattc gtcgctgtcc
     4021 tacctcaagc gcatgcccat cgacgccctg aagatcgacc gctcgttcgt ccacgacatc
     4081 accgaggacg gcgacggcgc cgagatcgtt tcgaccatca tcaacctggc ccacaacctc
     4141 aagctccgcg ccgtggccga gggcgtcgaa accgtcgagc aggccgactt cctgcgctcc
     4201 aagggctgcg acgaaatcca gggcttcctg atcagccgcc cggtctccag cgaggatttg
     4261 gtcagcctgt tcgaccggga tttgctgtag gatttccctc tcccgcttgc gggagagggc
     4321 ggggcccatt gcggagcaat gggagggtga gggcctggat gcatgccggg cggcaccagc
     4381 cctcacccgg ttcgctgccg ctcaccaccc tctcccgcaa gcgggcgagg gtttcggcgt
     4441 cgtcccgcta aaaccattta tttttagcgc gacggggcgt caaacccatc cgatttcatc
     4501 ttctttatct gtgttcatct gtgttcttga aaaccaagtg gcgggt
//
LOCUS       DATIKR010000570         2477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_56515, whole genome shotgun sequence.
ACCESSION   DATIKR010000570 DATIKR010000000
VERSION     DATIKR010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56515"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1101)
                     /gene="secD"
                     /locus_tag="VLL76_08875"
     CDS             complement(<1..1101)
                     /gene="secD"
                     /locus_tag="VLL76_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HSV29661.1"
                     /translation="MLQFPKWKIALIAVVCVLGVVWSLPNLLPRETTDKLPSWLQPVS
                     LGLDLQGGSYLLLEVDTQYVVREKLSSLIEAVRSELRKERIKYAELGVAGPDAVKVKV
                     LDSADRDRARGLLRKLDPDAAIDAGDDGLMVLRYPELALNTAIQSAVEQSLEIVRRRI
                     DELGTREPSIQRQGKDRIIVQLPGVKDPDRIKALIGKTAKLTFHLVDDTTSPAEAARG
                     RVPPGSELLPGVESDRNGPVYYVVRKRVEVGGEMLSKAKSNLDQYGRPVVEFGFNAQG
                     GKRFGDATRENAGRQLAIVLDGKVISAPRINEPILGGQGIISGSFTTRETQDLALLLR
                     AGALPAPMQVLEERTVGPDLGADSIRAGAVASV"
     gene            complement(1129..1497)
                     /gene="yajC"
                     /locus_tag="VLL76_08880"
     CDS             complement(1129..1497)
                     /gene="yajC"
                     /locus_tag="VLL76_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HSV29662.1"
                     /translation="MLVSPAFAQAAAPAGGQDMLTSFLPLILIFVVFYFLLIRPQQKR
                     MKAHKELLASLRRGDRVVTSGGIIGVVNKVVSDTEVILEIADNVKVRVVRATIQDIMD
                     KTQPVAAGKDEAEPEKPADK"
     gene            1647..>2477
                     /locus_tag="VLL76_08885"
     CDS             1647..>2477
                     /locus_tag="VLL76_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29663.1"
                     /translation="MTPEAHTLLARIADALERLAPPQAASAALDAADAFVWHAPDRLE
                     PVAEVNRVDIDLLKGIERQRDSLLDNTRRFADGLPANNALLWGARGTGKSSLVKAVHA
                     TLNAERPGALALVEIHREDIPTLPRLLKILRASARRTVLFCDDLSFDAQDDAYKSLKA
                     VLEGGIEGRPANVVFYATSNRRHLMARDMIDNERSTAINPGEAVEEKVSLSDRFGLWL
                     GFHHVGQDVFMEMVEGYAQRFALPIAPDDLRAQANEWSVTRGARSGRVAWQFIQDLAG
                     R"
BASE COUNT          382 a          852 c          836 g          407 t
ORIGIN      
        1 cacgctggcg acggcgccgg cgcggatgga atcggcaccg aggtcgggac cgacggtgcg
       61 ctcctccagc acctgcatgg gcgccggcag ggcgccggcg cgcagcagca gcgccagatc
      121 ctgggtctcg cgggtggtga agctgcccga gatgatgccc tggccgccca ggatgggctc
      181 gttgatgcgc ggcgcgctga tgaccttgcc gtccagcacg atggcgagct ggcggccggc
      241 attctcgcgg gtggcgtcgc cgaagcgctt gccgccctga gcgttgaagc cgaattcgac
      301 caccgggcgg ccgtactggt cgaggttgga cttggccttg ctcagcatct cgccgcccac
      361 ctcgacgcgc ttgcgcacga cgtaataaac cggcccgttg cggtcgctct cgacgccggg
      421 caacagttcc gagcccggcg gcacgcggcc gcgcgcggcc tcggccgggc tggtggtgtc
      481 atcgaccaga tggaaggtca gcttggcggt cttgccgatc agcgccttga tgcggtcggg
      541 gtccttgacg cccggcaact ggacgatgat gcggtccttg ccctggcgct ggatcgaggg
      601 ttcacgggtg cccagctcgt cgatgcggcg gcgcacgatc tccagcgatt gttcgaccgc
      661 cgattggatc gcggtgttca gcgccagttc gggatagcgc agcaccatca ggccgtcgtc
      721 gccggcgtcg atcgcggcgt cggggtcgag cttgcgcagc aggccgcgcg cgcggtcgcg
      781 gtcggcggaa tccagcacct tgaccttgac cgcgtcggga ccggcgacgc ccaactcggc
      841 gtatttgatg cgctccttgc gcagttccga gcgcaccgcc tcgatcagcg acgacagctt
      901 ttcccggacg acgtattggg tgtcgacctc cagcagcagg taggaaccgc cctgcaggtc
      961 gaggcccagg ctgacgggtt gcagccagga cggcagcttg tccgtggttt cacgcggcag
     1021 caggttgggc aggctccaca ccacacccag cacgcacacc accgcgatca gcgcgatctt
     1081 ccacttgggg aactgaagca tgaccgtccg tcgtccttga gggaaagctt acttgtcggc
     1141 cggcttttcg ggttcggcct cgtccttgcc ggcggcgacc ggctgggtct tgtccatgat
     1201 gtcctggatg gtggcgcgca ccacgcggac cttcacgttg tcggcgatct ccaggatcac
     1261 ctcggtgtcg ctgacgacct tgttgacgac accgatgatg ccgcccgagg tgacgacgcg
     1321 atcgccgcga cgcaggctgg ccagcaattc cttgtgcgcc ttcatgcgct tctgctgcgg
     1381 gcggatcagc aggaaataga acaccacgaa gatcaggatc aggggcagaa aggacgtcag
     1441 catgtcctgc ccgccggcgg gagcggctgc ctgggcgaag gcgggagaaa cgagcatcat
     1501 ggtctcctgg tgtaccggtc gttgagtgtg cggaatatag ccgccctggc cgcgcttgca
     1561 aacgttaact cccggtaagc ccgcttgccc actcgacgcc cccgccttag gctggcggcc
     1621 ggtatagtcc tttcgcctgg atcgccatga cgccggaagc ccacaccctg cttgcccgca
     1681 tcgccgacgc gctggagcgg ctggcgccgc ctcaggccgc atccgccgcc ctcgatgccg
     1741 ccgacgcctt cgtctggcat gcccccgacc ggttggagcc ggtggccgag gtcaaccggg
     1801 tcgacatcga cctgctgaag ggcatcgagc gccagcgcga ttcgctgctc gacaacaccc
     1861 gacgcttcgc cgacggcctg ccggccaaca acgcgctgct gtggggcgcg cgcggcaccg
     1921 gcaaaagctc gctggtcaag gcggtgcacg ccaccctcaa cgccgagcgc cccggcgccc
     1981 tggcactggt ggaaatccac cgcgaggaca tccccaccct gccccgcctg ctcaagatcc
     2041 tgcgcgccag cgcacgccgc accgtgctgt tctgcgacga tctgtcgttc gacgcccagg
     2101 acgacgccta caagtcgctg aaggcggtgc tggagggcgg catcgagggc cggccggcca
     2161 acgtggtgtt ctacgccacc tcgaaccgcc gccacctgat ggcgcgcgac atgatcgaca
     2221 acgaacgctc gaccgccatc aatcccgggg aggcggtgga ggaaaaggtg tcgctatccg
     2281 accgcttcgg cctgtggctg ggcttccacc acgtcggcca ggacgtgttc atggaaatgg
     2341 tcgagggcta tgcccaacgc ttcgccctgc ccatcgcgcc ggacgacctg cgcgcccagg
     2401 ccaacgaatg gtccgtcacc cgcggcgccc gctcgggccg cgtggcgtgg cagttcatcc
     2461 aggatctggc ggggcgg
//
LOCUS       DATIKR010000571         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_8474, whole genome shotgun sequence.
ACCESSION   DATIKR010000571 DATIKR010000000
VERSION     DATIKR010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8474"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..2122
                     /locus_tag="VLL76_08890"
     CDS             20..2122
                     /locus_tag="VLL76_08890"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSV29664.1"
                     /translation="MPEHHLRRRLLASAGAFLAAATCAQAEEPKHLDEISVTATRAER
                     ATKDVPQSITVVGSERIESEKMMNIKDALQGTPGVQIDSKNGGYDVRLVVRGAGVNTA
                     YGVREIMVLRDGVPMTDPDSFTLFDRIDTQDIERIEVLKGPGNMFGSGSAGGTIHIMS
                     KSVFADEANRVRVGLGNLGAESYHARVGGMVSDNQAVALTASRRVMDNDWRRWNNFET
                     NQLSAKHGIMGADGGVLESEIAWGNAFTQLPGAMDLNQFNEFRRTGKQTDTYDAWKRS
                     GRDSETVFMNSRYEKDYGDWTFKPRVYATHWQHYHPVTGAIGVIPDNYTFGTDIEGQV
                     PHRLGGMAAALDAGVTYRGDLNDSEKYKYKYFTTGGGGRITRVLSDVKGDLIETSQTD
                     THLYGVFAHENVQLSPNLSLDAGARLDRVFFDIETNEMQKYDYATAKYAAGGGFSHVT
                     PTFTLFSPKLGLSYKLSNEVTAYGSVARGEQIPSSTQLESNSGLTPSVSLNYEIGLKQ
                     RSDQWSFDTALYYNPVTDDIVTVYDNAETSYQNAGKTIRQGWEINGSHTPLPGLTFGG
                     GYAYQDYTYDRFFEVVNRQTVNRSGKRVPWTPMHQYSLFAEYRHEVGLKARVTTLTND
                     GWQMDNANTKDYGGSFFITNIMVGWDFDKHHSVALNVDNLFNEHYAIEAKKDAGTGRE
                     TFTGAPPRSVLATYMVKF"
BASE COUNT          444 a          735 c          640 g          329 t
ORIGIN      
        1 actagcggag agagttttca tgcccgaaca ccatctgcgg cgacgccttt tggcgtcggc
       61 cggagccttc ctggcggcgg cgacctgcgc ccaggccgag gaacccaagc acctggacga
      121 gatcagcgtc accgccaccc gcgccgagcg cgccaccaag gacgtgccgc aatccatcac
      181 cgtcgtcggc tcggagcgca tcgaatccga gaagatgatg aacatcaagg acgcgctgca
      241 gggcacgccc ggcgtccaga tcgacagcaa gaacggcggc tacgacgtcc gtctggtggt
      301 gcgcggcgcc ggcgtcaaca cggcctatgg cgtgcgcgag atcatggtgc tgcgcgacgg
      361 cgtgcccatg accgaccccg atagcttcac cctgttcgac cgcatcgaca cccaggacat
      421 cgagcgcatc gaagtgctga agggccccgg caacatgttc ggcagcggct cggccggcgg
      481 caccatacac atcatgtcga aatcggtgtt cgccgacgaa gcgaaccggg tccgcgtcgg
      541 cctgggcaat ctgggcgccg aaagctacca cgcccgcgtc ggcggcatgg tttcggacaa
      601 ccaagcggtg gcgctgacgg cgtcgcgccg ggtgatggac aacgactggc ggcgctggaa
      661 caacttcgag accaaccagc ttagcgccaa gcacggcatc atgggcgccg acggcggcgt
      721 gctggaatcc gagatcgcct ggggcaacgc cttcacccag ttgcccggcg ccatggacct
      781 caaccagttc aacgagttcc gccgcaccgg caagcagacc gacacctacg acgcctggaa
      841 gcgctcgggc cgcgattccg agaccgtgtt catgaattcg cgctatgaaa aggattacgg
      901 cgactggacg ttcaagccgc gcgtctacgc cacccattgg cagcattacc accccgtcac
      961 cggtgccatc ggcgtcatcc ccgacaatta caccttcggc accgacatcg agggccaggt
     1021 gccccatcgt ctcggcggca tggcggctgc gttggatgcg ggcgtcacct atcgcggcga
     1081 cctcaatgac agtgagaagt acaaatacaa gtacttcacc acgggcggcg gcggccgcat
     1141 cacccgcgtg ctgtcggacg tcaagggcga cctgatcgag acgtcgcaga ccgacaccca
     1201 cctgtacggc gtcttcgccc acgagaacgt gcaactgtcg cccaacttgt ctctggatgc
     1261 cggcgcccgc ctggaccgcg tgttcttcga catcgagacc aacgagatgc agaagtacga
     1321 ttacgcaacg gccaagtacg cggcgggcgg cggcttttcc cacgtcacgc cgaccttcac
     1381 gctgttctcg cccaagttgg gcctcagcta taaattgtcg aacgaggtca ccgcctatgg
     1441 ctcggtggca cgcggcgagc agattccgtc ctcgacccag ttggaatcca attccggcct
     1501 gacgccgtcg gtgtcgctga actacgagat cggcctcaag cagcgctcgg atcaatggtc
     1561 gttcgacacc gcgctgtact acaacccggt caccgacgac atcgtcacgg tctacgacaa
     1621 cgccgagacc agctatcaaa acgccggcaa gaccatccgc cagggatggg agatcaacgg
     1681 cagccacacc cccctgcccg gcctgacctt cggcggcggc tacgcctacc aggactacac
     1741 ctacgaccgc ttcttcgagg tggtgaaccg ccagaccgtg aaccgctcgg gcaagcgcgt
     1801 gccgtggacc cccatgcacc agtattcgct gttcgcggaa taccgccacg aggtcggcct
     1861 gaaggcgcga gtcaccaccc tgaccaacga tggctggcag atggacaacg ccaacaccaa
     1921 ggattacggc ggctcgttct tcatcaccaa catcatggtg ggctgggact tcgacaaaca
     1981 ccactcggtg gcactgaacg tcgacaacct gttcaacgag cattacgcca tcgaggccaa
     2041 gaaggacgcc ggcaccggcc gcgagacctt caccggcgcg ccgccgcgca gcgtgctggc
     2101 cacctacatg gtcaagttct agggagggcc ggccgatgcg acacatca
//
LOCUS       DATIKR010000572         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_45250, whole genome shotgun sequence.
ACCESSION   DATIKR010000572 DATIKR010000000
VERSION     DATIKR010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45250"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1385)
                     /locus_tag="VLL76_08895"
     CDS             complement(<1..1385)
                     /locus_tag="VLL76_08895"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008612973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSV29665.1"
                     /translation="MSKSRSPSVGRPVSRLALAAVAAVGLAGCGIEKPVGTIGFVEGF
                     GGVVAADEPRAVVVARDVLSSGGTAADAAVALYFTLAVTQPSTASLGGGGVCIVHSGD
                     GKKVRTEVVDFLAPPSAAAGQARSPSAVPTAVRGLFAMHAKYGRLRWEQLLAEPERLA
                     RFGAPVSRAFAADLAKAAPVIARDPAARRIFFHPNGRVMGEGDELQQLDLAVTIGRIR
                     RAPGDFYVGAGARGMIEAATQAGLSLTQEDLRDFRPAFRDTVTVKLGNEVAHFAPPPA
                     VASDAAGTLTKAAVAKPEDRANILTQAVAQGQSAPAIMPGTGFVVLDSIGTAVVCGVS
                     TQGVFGNGRVFPGTGIVAAAAPGVNGGPPAVAPMLLINPNVNEVRFGGTATGGGEAPA
                     AVVSTLFAVYQDGRKLAEALDRPAAPNTPQSALAPTRVNAFYCDSGKASFKTCKVATD
                     PRGFGLAAMVG"
     gene            1378..>2040
                     /locus_tag="VLL76_08900"
     CDS             1378..>2040
                     /locus_tag="VLL76_08900"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HSV29666.1"
                     /translation="MLTRVFLLATFVLALTAPQSFAAPQQKRSFIRDAEVEGIIRTYS
                     TPLFQAAGLTPDAVKLYLLVDNSLNAFVAGGQNMFFHTGLLIRSENPGQLIGVIAHET
                     GHISGGHLARVQDAVGNASTEALLATLLGAAAGIASGRGDVAAAITMGGSEMAMRNLL
                     AYTRTEESSADQAAIRYLEASGMSSKGMLEFFDTLGDQELLVAARQDPYVRTHPLTRD
                     RVA"
BASE COUNT          313 a          730 c          716 g          281 t
ORIGIN      
        1 ttgccgacca tggcagccag gccgaaaccg cgcggatcgg tggcgacctt gcaagtcttg
       61 aagctggcct tgccggagtc gcaataaaag gcgttcaccc gagtgggcgc cagggccgat
      121 tgcggcgtgt tgggcgcagc cgggcggtcc agcgcctcgg ccagcttgcg gccgtcctgg
      181 tagaccgcga acagggtcga gaccaccgcc gccggagcct cgccgccgcc ggtggcggtg
      241 ccgccgaaac gcacctcgtt gacgttggga ttgatcagca gcatgggcgc caccgccggc
      301 gggccgccgt tgacgccggg ggccgccgcc gcgacgatgc cggtgccggg gaagacgcgc
      361 ccgttgccga acacgccctg ggtgctgacg ccgcacacca cggcggtgcc gatgctgtcc
      421 agcaccacga agccggtgcc cggcatgatg gcgggcgccg actggccctg ggccaccgcc
      481 tgggtcagga tgttggcacg gtcctcgggc ttggcgaccg ccgccttggt gagggtgccg
      541 gcggcgtccg aggcgaccgc cgggggcggc gcgaaatggg cgacctcgtt gcccagcttg
      601 accgtgacgg tgtcgcggaa ggccggacgg aagtcgcgca gatcctcttg cgtcagcgac
      661 aggccggcct gggtcgccgc ctcgatcatg ccacgggcgc ccgctcccac gtagaaatcg
      721 cccggcgcgc ggcggatgcg gccgatggtg acggcgagat cgagctgctg cagctcgtcg
      781 ccctcgccca tcacgcggcc gttgggatgg aagaagatgc ggcgcgccgc agggtcgcgg
      841 gcgatcaccg gcgccgcctt ggccaggtcg gcggcgaagg cgcgcgacac cggggcgccg
      901 aagcgggcca ggcgctcggg ttcggccagc aattgctccc accgcaggcg gccgtatttg
      961 gcatgcatgg cgaacaagcc gcgcaccgcc gtcggcaccg cactgggcga gcgcgcctga
     1021 ccggcggccg ccgacggcgg cgccaggaag tcgacgacct cggtgcggac cttcttgccg
     1081 tcgccggaat ggacgatgca aacgccgccg ccgcccagac ttgctgttga cggctgggtc
     1141 actgccagcg tgaaatacag ggccacggcg gcatcggccg cggtgccgcc ggacgacagc
     1201 acgtcgcggg cgacgacgac ggcgcgcggt tcgtccgccg ccaccacgcc gccgaatccc
     1261 tcgacgaagc cgatggtgcc gaccggcttt tcgataccgc aacccgcgag cccgacggcg
     1321 gcgaccgccg ccagggcaag acgggaaacg ggacgaccga ctgacggaga cctgctcttg
     1381 ctcacgcgcg tgttccttct ggcaaccttc gtcctggcgc tgacggcgcc gcaatccttt
     1441 gccgcaccac aacagaagcg cagcttcatc cgcgatgcgg aagtggaagg tatcatccgc
     1501 acctattcga cgccactgtt ccaggcagcc ggccttaccc ccgacgcggt gaagctttac
     1561 ctgctggtcg acaattcgct gaacgccttc gtggccggcg gccagaacat gttcttccac
     1621 accggcctgc tgatccggtc cgagaatccc ggccagttga tcggcgtcat cgcccacgag
     1681 accggccaca tttcgggcgg ccacctggcg cgcgtgcagg acgcggtcgg caacgcctcg
     1741 accgaggcgc tgctcgccac cctgctgggc gccgccgccg gcatcgcctc gggacgcggc
     1801 gacgtggccg ccgccatcac catgggcggc tcggaaatgg ccatgcgcaa cctgctggcc
     1861 tatacccgca ccgaggaatc ctcggccgac caggccgcca tccgctacct cgaggcgagc
     1921 ggcatgtcgt ccaagggcat gctggagttc ttcgatacgc tgggtgacca ggaattgctg
     1981 gtggcggcgc ggcaggaccc ctatgtgcgc acccacccgc tgacccgcga ccgcgtcgcc
//
LOCUS       DATIKR010000573         4641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_20196, whole genome shotgun sequence.
ACCESSION   DATIKR010000573 DATIKR010000000
VERSION     DATIKR010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4641
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20196"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..614
                     /locus_tag="VLL76_08905"
     CDS             <1..614
                     /locus_tag="VLL76_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HSV29667.1"
                     /translation="YLLRLGWSHGDDEIIATEQAIEWFNLDSVGRSPSRFDFVKLTNL
                     NGHYMRQADDARLAELALPFVEKAAGLTVDDAGKALLRAGMTGLKERSKTLIELAEQA
                     AFYVRKRPLALDEKAAKQLDADGKAVLSAFAARIRGAEPWSKETLEEAARVYAEESGL
                     KLGKIAQPLRAALTGSSVSPPIFEVMEVLGRAETLGRIDDTGI"
     gene            701..2005
                     /gene="gltA"
                     /locus_tag="VLL76_08910"
     CDS             701..2005
                     /gene="gltA"
                     /locus_tag="VLL76_08910"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HSV29668.1"
                     /translation="MTNKAETVSIINNSSGQQMEVPLLGGTIGPKVMDIRALYSNMDI
                     FTYDPGYTSTGSCKSAITYIDGDQGVLLHRGYAIDELAENCSFLEVAYLILKGELPNA
                     EQKAKFEGDITRHSMLNEQMSFFYRGFRRDSHPMAVMCGVVGAMAAFYHDSTDINDPH
                     QRMIASYRLIAKMPTVTAWAYKYSQGQPFMYPQNKLSYAENFLHLMYATPCEEYKVNP
                     VLARAMDRILILHADHEQNASTSTVRLAGSSGANPFACIAAGIASLWGPAHGGANEAV
                     LNMLHEIGSVDRIPEFVKRAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLNEL
                     GVQDEPLLKLAMELERIALEDEYFVERKLFPNVDFYSGIIFRAMGIPTQMFTSLFALA
                     RTVGWIAQWNEMLTDPDQKIGRPRQLYVGEAPRKFVPLDKRG"
     gene            complement(2300..3613)
                     /locus_tag="VLL76_08915"
     CDS             complement(2300..3613)
                     /locus_tag="VLL76_08915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HSV29669.1"
                     /translation="MWSEILVVVALVLLNGFFAMSELALVSSRPADLRRRAEAGVRGA
                     KIALELLADPSRLLSAVQIGITLVGIIAGAYSGATLGGHVAESLTESVPPLAPWADEI
                     AMTVVVGLITYLSLVVGELVPKRLAMHHSEAIAVRVAPIMRVIANGGGPVVSLLRFST
                     DALLRLLGQRPSDAKSVTEEEVRALIAEGALAGVIEPVEKEMMDRVMRLADRPAGSVM
                     TPRPDIVWIDAESSTDDIRRKLAESPHSRFLVAKGDIDEVMGVLDTRVILERLLSDGL
                     FEPLAAIREAPAVHEETPVPRLLDLFRESGAPMIVVLDEYGGVEGIVTLTDILEAIAG
                     EMPSADAEGPGAVRRDDGSWLFDGGLAVEEVESLTGLSRMGEEGDFHTLAGFVLARLA
                     HLPSIGESFNWNGWRFEVVDMDGRRIDRILAEPPKMPEETSGSGI"
     gene            complement(3708..3950)
                     /locus_tag="VLL76_08920"
     CDS             complement(3708..3950)
                     /locus_tag="VLL76_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29670.1"
                     /translation="MSRFSLIGLVLSVLALSACGSSTSDRALSGGAIGAGVGAGTAAV
                     TGGNVLGGAAIGGAGGAAAGALTDEEDLDLGKPVWR"
     gene            complement(4019..>4641)
                     /locus_tag="VLL76_08925"
     CDS             complement(4019..>4641)
                     /locus_tag="VLL76_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSV29671.1"
                     /translation="PCRVESSNPGHLLYCGIVPPERAVRVADSLMGPDMFSGWGIRTL
                     SERERRYNPMSYHNGSVWPHDCALAAAGLARYGMADRAQKILGGLFDAALYVDLNRLP
                     ELFCGFPRQAGQGPTLYPVACIPQAWAAGSAFMLLEAVLGLELVADPPTILFHRPVLP
                     DFLDRVDIIGLKVGGASVDVVLNRHPHSVGINVLRRDGEIDIRVDM"
BASE COUNT          863 a         1611 c         1468 g          699 t
ORIGIN      
        1 actacctgct gcgcctgggc tggagccacg gcgacgacga gatcatcgcg accgagcagg
       61 ccatcgagtg gttcaacctg gattcggtgg gccgctcgcc gtcgcgcttc gacttcgtca
      121 agctgaccaa cctcaacggc cattacatgc gccaggccga cgacgcccgc ctggccgaat
      181 tggcgctgcc cttcgtggaa aaggccgccg gcctgaccgt ggacgatgcc ggcaaggcgc
      241 ttttgcgcgc cggcatgacc gggctcaagg aacgctcgaa gactttgatc gaacttgccg
      301 agcaggccgc cttctacgtc cgcaagcgcc cgctggcgct ggacgaaaag gccgccaagc
      361 agctcgacgc cgacggcaag gcggtgctgt ccgcattcgc cgcgcgcatc cggggggcgg
      421 agccctggag caaggaaaca ttggaagagg ccgcccgcgt ttacgcggaa gaaagcggcc
      481 tcaagctggg aaagatcgcg cagccgctgc gggccgcgct gacgggttcc tcggtttctc
      541 cccccatctt cgaagtgatg gaggtgttgg gacgggccga gacgctgggc cgaatcgatg
      601 acacgggtat ttaacggcct ttaataacaa gaaaagccgc aatgcggcgt ccgacgaaac
      661 aacaacgaca ccatagtgtg gaaacacggg gactgctgac atgacgaaca aagccgagac
      721 cgtttcgatc atcaacaaca gctccggcca gcagatggaa gttccgctgc tggggggcac
      781 catcggcccc aaggtgatgg acatccgtgc gctgtacagc aacatggaca tcttcaccta
      841 cgatccgggc tacacctcca ccggctcgtg caagtcggcc atcacctaca tcgacggtga
      901 ccagggcgtc ctgctgcatc gcggctacgc catcgacgag ctggccgaga attgcagctt
      961 cctcgaggtc gcctacctga tcctcaaggg tgagctgccg aacgccgagc agaaggccaa
     1021 gttcgagggc gacatcaccc gccactcgat gctgaatgag cagatgtcgt tcttctatcg
     1081 cggcttccgc cgcgactcgc accccatggc cgtgatgtgc ggcgtggtcg gcgcgatggc
     1141 ggcgttctat cacgactcga ccgacatcaa cgacccgcat cagcgcatga tcgcgagcta
     1201 tcgcctgatc gccaagatgc cgaccgtgac cgcctgggcc tacaagtact cgcagggcca
     1261 gcccttcatg tacccgcaga acaagctctc ctacgccgag aacttcctgc acctgatgta
     1321 cgcgaccccg tgcgaggaat acaaggtcaa cccggtcctg gcccgcgcca tggaccgcat
     1381 cctgatcctg cacgccgacc acgagcagaa cgcctcgacc tcgaccgtcc gcctggccgg
     1441 ttcgtcgggc gccaacccgt tcgcctgcat cgccgccggc atcgcctcgc tgtggggtcc
     1501 cgcccatggc ggcgccaacg aggccgtgct gaacatgctg cacgagatcg gctcggtcga
     1561 ccgcatcccc gagttcgtca agcgcgccaa ggacaagaac gatccgttcc gcctgatggg
     1621 cttcggccac cgcgtgtaca agaactacga tccgcgcgcc aagatcatgc agaagacctg
     1681 ccacgaggtt ctgaacgaac tgggcgtgca ggacgagccg ctgctgaagc tggccatgga
     1741 actggagcgg atcgccctgg aagacgaata cttcgtcgag cgcaagctgt tcccgaacgt
     1801 cgacttctat tcgggcatca tcttccgcgc catgggcatc ccgacccaga tgttcacctc
     1861 gctgttcgcc ctggcccgca ccgtcggctg gatcgcgcag tggaacgaga tgctgaccga
     1921 ccccgatcag aagatcggcc gtccgcgcca gctctatgtg ggcgaagccc cccgcaagtt
     1981 cgtcccgctc gacaagcgtg gctgagcttc ggcgagataa gtccagacct gaagggcggc
     2041 gcttcccggc gccgccccga cggctgccgt ccgcggccaa cgacaacatg gccccgggcc
     2101 gccgccgcat gatccgcgcc gccgtgttgg cgtcggcgat cgcggtcgcg ctgaccgccg
     2161 tcacgctgat cagctaaagc acttccctcg tcatccccgc gcaggcgggg atccatgttg
     2221 gggcgagcac tgaacctgac cactaaacat ggggtggctg acgcatggat tcccgctttc
     2281 gcgggaatga cgggacttat taaatcccgc tgccgctggt ctcttccggc atcttcggcg
     2341 gctcggccag gatgcggtcg atgcgacggc cgtccatgtc caccacttcg aaccgccagc
     2401 cgttccagtt gaagctctcg ccgatggacg gcagatgagc cagccgggcc agcacgaagc
     2461 cggccagggt atggaaatcc ccctcctcgc ccatgcgcga cagtccggtc agggattcca
     2521 cctcctccac cgccaggccg ccgtcgaaca gccacgagcc gtcgtcgcgg cgcacggcgc
     2581 ccgggccttc ggcgtcagcc gacggcatct cgccggcaat ggcttccagg atgtcggtga
     2641 gggtgacgat gccctcgacg ccgccatatt cgtccagcac cacgatcatc ggcgcgccac
     2701 tctcgcggaa caggtcgagc aggcgcggca ccggcgtttc ctcgtgcacc gccggggcct
     2761 cgcggatggc ggccagcggc tcgaacaggc cgtccgacag caagcgttcg agaatgaccc
     2821 gggtgtcgag cacccccatc acctcgtcga tgtcgccctt ggcgaccagg aagcgggaat
     2881 gcgggctttc cgccagcttg cggcggatgt cgtcggtcga ggattcggcg tcgatccaca
     2941 cgatgtcggg acgcggcgtc atcaccgagc cggccggacg gtcggccagg cgcatgacgc
     3001 ggtccatcat ctccttctcc accggctcga tgacgccggc cagggcaccc tcggcgatca
     3061 gggcgcgaac ttcctcctcc gtcaccgact tggcatccga cggccgctgg cccaacaagc
     3121 gcagcaaggc gtcggtcgaa aagcgcaaca gcgacaccac cgggccgccg ccattggcga
     3181 tcacccgcat gatcggggcg acgcgcacgg cgatggcttc ggaatggtgc atggccaggc
     3241 gcttgggcac caattcgccc accaccagcg acagataggt gatgaggccg accaccaccg
     3301 tcatggcgat ctcgtcggcc cacggcgcca gcggcggaac actctcggtc aaactctcgg
     3361 ccacatggcc acccagggtg gcgccggaat aggcgcctgc gatgatgccc accagggtga
     3421 tgccgatctg caccgccgac agcaggcggc tggggtcggc cagcaattcc aacgcgatct
     3481 tggccccgcg cacgccggcc tcggcccgcc gccgcagatc cgcgggccgt gacgacacca
     3541 gcgccagctc cgacatggcg aagaagccgt tcagaaggac aagggcgacg acgaccagga
     3601 tttcggacca catgggaggg gaaggttccg agttgaactc gtcgccatgc taacccggcc
     3661 gcaacgcgat ggataggggg cggccaatcc ccgcccccgt tgattcgtca gcgccagacc
     3721 ggcttgccca ggtccagatc ctcttcgtcg gtcagcgcgc cggccgccgc gccgccggca
     3781 ccgccgatgg cggcgccgcc caggacgttg ccgccggtga ccgccgccgt gccggcaccg
     3841 acgccagctc cgatggcgcc gcccgacaac gcgcggtcgc tggtcgatga gccgcatgcg
     3901 gacagggcca gcaccgacag caccaggcca atcaggctga agcgggacat gcttgtttcc
     3961 tttcagacac gggaatcacc ccgatgaaca cgggcacggg cgccatgttc cgggcggttc
     4021 acatatccac ccggatgtcg atctcgccgt cgcggcgcag cacgttgata cccacggaat
     4081 gggggtggcg gttcagcacc acgtccaccg aggcgccccc gaccttcagc ccgatgatat
     4141 ccacccggtc gaggaagtcg ggcagcaccg ggcggtgaaa caggatggtg ggcgggtcgg
     4201 ccaccagttc cagccccagc accgcttcca gcagcatgaa ggcgctgccg gcggcccagg
     4261 cctgggggat gcacgccacc gggtaaagcg tcggcccctg ccctgcctgg cggggaaagc
     4321 cgcagaataa ttccggcaga cggttgagat cgacgtagag cgctgcgtcg aacagcccgc
     4381 ccagaatctt ctgggcgcgg tcggccatgc cgtagcgcgc cagcccggcc gccgccaggg
     4441 cgcaatcgtg cggccagacc gaaccgttgt ggtaactcat ggggttgtag cggcgctcgc
     4501 gctcggagag ggtgcgaatg ccccagcccg agaacatgtc ggggcccatc agcgaatcgg
     4561 cgacacggac agcgcgttcc ggcggcacga tgccgcaata cagcaggtgg ccgggattgg
     4621 aactttccac ccggcacggc c
//
LOCUS       DATIKR010000574         3091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_45270, whole genome shotgun sequence.
ACCESSION   DATIKR010000574 DATIKR010000000
VERSION     DATIKR010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3091
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45270"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..178)
                     /locus_tag="VLL76_08930"
     CDS             complement(<1..178)
                     /locus_tag="VLL76_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004955274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSV29672.1"
                     /translation="MSDCCTGCGCSGPPKPAVDPFFRRILWVALVLNGSMFFVEFAGG
                     WLARSVSLTADSLDF"
     gene            334..708
                     /locus_tag="VLL76_08935"
     CDS             334..708
                     /locus_tag="VLL76_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV29673.1"
                     /translation="MTRRLISSGSPFEEVAGYSRAVVQDPWVFVAGTSGFKDGQIADS
                     EVAQAEQAIATIAGALEQAGASLADVVRVVMYVTDASYFQTIAPVLGKAFKGIKPANT
                     TIVCGLVDPRMKVEIEVTALKR"
     gene            759..1427
                     /locus_tag="VLL76_08940"
     CDS             759..1427
                     /locus_tag="VLL76_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29674.1"
                     /translation="MPTILITGANRGLGLEFARQYAADGWRVIATVRDPLKGRAASDA
                     GAEVYVADVADPNSIARLAASLKDVELDALLNNAGVYGDHQDFGSVDPEGFMRVMRAN
                     ALGPLKMAEAFADRLAGRKVIASVSSKMGSIAENTSGGNYAYRASKAALDMITASLAI
                     DLKPKGVTVVALSPGWVRTDMGGDSAPLDPPTAVAGMRKVLDGLSPADSGKFFHYDGS
                     LVAW"
     gene            1448..2248
                     /locus_tag="VLL76_08945"
     CDS             1448..2248
                     /locus_tag="VLL76_08945"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSV29675.1"
                     /translation="MLVLAAAVAGWSFGIEPDLLLTREVAVESADWPKGRRPLKIAFV
                     ADLHPGVAHVDLAKIAEVVRRINAAEPDLILLGGDYIAGRPPRIPIEETARALSGLKA
                     PMGVVSVLGNHDWWFDGTRVARALADVGITVLENGAVPLDAPDGRLWVAGLADDSTRR
                     PDGVAAFGGVPPGQPAIALMHDPASLSEAAGRAMLVLAGHTHGGQVRLPLVGSPVVPG
                     RAPRRMAYGLMVEQGQLLYVTSGIGTSILPVRFNMPPEIVLLTLGPKS"
     gene            2245..2856
                     /locus_tag="VLL76_08950"
     CDS             2245..2856
                     /locus_tag="VLL76_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HSV29676.1"
                     /translation="MTSVDFYFDFSSPYAYFASGEIDALAAEFGRSVAWRPILLGPAF
                     KASGNERLIDQPLKGAYVRHDWERVARLTGMAYRFPKPFPVPTLAAGRAFWWLDERDP
                     ALAKRFAQAVFAAYFAEGRDITPRETVAEIGAQVGVPAAGLLAAVEDPRWKQKLKDET
                     EAAIARGVFGAPFVFIGDEGFWGWDRLPMVRRWLKTGGWQGKE"
     gene            2912..>3091
                     /locus_tag="VLL76_08955"
     CDS             2912..>3091
                     /locus_tag="VLL76_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29677.1"
                     /translation="MDAQDDTVPYVAKTQASALATAATLLDQAKQDRGDLSGLVGALD
                     LNLQLWVAINCLTNSP"
BASE COUNT          476 a         1047 c         1052 g          516 t
ORIGIN      
        1 ggaagtccag ggaatcggcg gtcagcgaca ccgaccgcgc cagccagccg ccggcgaact
       61 cgacgaagaa catcgagccg ttaaggacca gcgccaccca caggatgcgc cggaagaagg
      121 gatcgacggc aggcttgggc ggacccgagc agccgcaacc ggtgcaacaa tcgctcatgg
      181 cccccatctt gcgcgggatg gcgccgggcg caagcgacaa agtcacagag gcttgccccg
      241 cgcgcgtttt ccggtagaac cagcgtgtgg ccccgcgtgt ttcatcggcg gcggtgggcc
      301 atggccgtcg cccatcttgt tcaaggaccg atcatgaccc gtcgtctgat ttcctccggc
      361 tcgcccttcg aggaggttgc cggctattcg cgtgccgtcg tgcaggaccc gtgggtgttc
      421 gtcgccggca cctcgggctt caaggacggc cagatcgccg acagcgaagt ggcccaggcc
      481 gagcaggcca tcgccaccat cgccggcgcc ctggagcagg ccggcgcctc gctggccgat
      541 gtggtccggg tggtcatgta cgtcaccgac gcgtcctatt tccagaccat cgccccggtg
      601 ctgggcaagg ccttcaaggg catcaagccg gccaacacca ccatcgtgtg cggcctggtc
      661 gatccccgca tgaaggtcga gatcgaggtc actgcactga agcgctgatg ttccaagggc
      721 tcccgcgagg gagccctttt cccgagggag gaacgcccat gcccaccatc ctgatcaccg
      781 gcgccaatcg cggcctcggc ctggaattcg cccgccaata cgccgccgac ggttggcgcg
      841 tcatcgccac cgtgcgcgac ccgctgaagg gcagggcggc gtccgacgcc ggtgccgagg
      901 tctatgtcgc cgacgtcgcc gaccccaatt ccatcgcccg cctcgccgct tcgctgaaag
      961 acgttgagtt ggacgcgctg ctcaacaacg cgggcgtcta tggcgaccac caggatttcg
     1021 gctcggtcga ccccgagggt ttcatgcggg tgatgcgcgc caacgcgctg gggccgctga
     1081 agatggccga ggccttcgcc gaccgattgg ccggccgcaa ggtcatcgcc tcggtgtcgt
     1141 ccaagatggg ctcgatcgcc gagaacacct cgggcggcaa ctacgcctat cgcgccagca
     1201 aggcggcgct cgacatgatc accgcgtcgc tggccatcga cctcaagccc aagggcgtca
     1261 ccgtggtggc gctgtcgccg ggttgggtgc gcaccgacat gggcggcgac tcggccccgc
     1321 tcgacccgcc caccgccgtg gccggcatgc gcaaggtgct ggacggcctg tcgcccgccg
     1381 acagcggcaa gttcttccat tacgacggca gcctcgtggc gtggtgattg ttcgcgccgc
     1441 cgccgtaatg ctggtgcttg cggcggcggt cgcgggttgg tccttcggta tcgagcccga
     1501 tctgctgctc acccgggagg ttgccgtcga gagcgccgac tggccaaaag gcaggcggcc
     1561 gctgaagatc gccttcgttg ccgatctcca tcccggcgtt gcccatgtgg acctcgccaa
     1621 gattgcggaa gtggtgcggc gcatcaacgc ggccgaaccc gatctgatcc tgctgggcgg
     1681 ggactacatt gccggccggc cgccgcgtat ccccatcgag gaaaccgccc gcgcgctctc
     1741 cggcctgaag gctccgatgg gcgtggtgtc ggtgctgggc aatcatgact ggtggttcga
     1801 cggcacgcgg gtggcgcggg ctcttgccga cgtcggcatc acggtgctgg aaaacggcgc
     1861 ggtgccgctt gacgcgccgg atggccggct gtgggtcgcg ggccttgccg atgacagcac
     1921 ccgccgcccc gatggcgtcg cggccttcgg cggcgttccg cccggccagc ctgccatcgc
     1981 attgatgcat gaccctgcca gcctgtcaga ggcggcgggg cgtgccatgc tggtcctggc
     2041 cggccatacc catggcggcc aggtgcggct gccgctggtc ggctcaccgg tggtgccggg
     2101 gcgggcgccg cgccgcatgg cctatggcct gatggtcgag cagggccaat tgctttacgt
     2161 cacctcggga atcggcacca gcatcctgcc ggtgcgcttc aacatgccgc ccgaaatcgt
     2221 tcttctcacg ctggggccga aatcttgacc tccgtcgatt tctatttcga cttctcgtcg
     2281 ccttacgcct acttcgccag tggcgaaatc gacgccctgg cggcggagtt cgggcggagc
     2341 gtcgcatggc gaccaatcct gctggggccg gcgttcaagg cgtcgggcaa tgagcggctg
     2401 atcgaccagc cgctgaaggg cgcctatgtc cgccacgact gggagcgggt ggcgcggctg
     2461 accggcatgg cctatcgctt tcccaagccg ttcccggtgc cgaccttggc cgccgggcgc
     2521 gccttctggt ggctggacga gcgcgatccg gcgctggcca agcgcttcgc ccaggcggtg
     2581 ttcgccgcct atttcgccga ggggcgcgac atcaccccgc gtgagacggt ggcggagatc
     2641 ggcgcccagg tgggtgttcc cgccgccggc ctgctggccg ccgtcgagga cccgcgctgg
     2701 aagcagaaat tgaaggacga gaccgaggcg gccatcgccc gcggcgtttt cggcgctccc
     2761 ttcgtattca tcggcgacga gggcttctgg ggttgggatc gcctgcccat ggtccggcgc
     2821 tggctgaaaa cgggcggctg gcaaggtaag gaataagcaa tcattcggcg ccatactttc
     2881 ggccacgaaa gaaaagtgga agggggattt catggacgcg caagacgata ccgttcccta
     2941 cgtcgccaag acccaggcgt cggcgctggc caccgcggcc accttgctgg accaggcgaa
     3001 gcaggacagg ggcgaccttt ccggcctggt cggcgcgttg gacctcaatc tgcagctgtg
     3061 ggtcgccatc aactgcctga ccaacagccc g
//
LOCUS       DATIKR010000575         3154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_8525, whole genome shotgun sequence.
ACCESSION   DATIKR010000575 DATIKR010000000
VERSION     DATIKR010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3154
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8525"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VLL76_08960"
     CDS             <1..607
                     /locus_tag="VLL76_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29678.1"
                     /translation="GGQGMNFEERLYSHYRLAILLSLIEEPAEARLRYAVLRVLSRIP
                     GRSANVSMLATLLPAYGFAVGRDEVEATVAWCDRARLVKAAEDDGVLGGLLLDLGRDV
                     VAGRATVPGVAPAPTFDWLQRNLEAKSIRLGMPDVIAHWSWCAERRLATCDDHDDGAL
                     FITPLGIDVAMGRSEVEGIQAPSTSTIMRLAGAAAATRLGG"
     gene            609..1109
                     /locus_tag="VLL76_08965"
     CDS             609..1109
                     /locus_tag="VLL76_08965"
                     /inference="COORDINATES: protein motif:HMM:NF020401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HSV29679.1"
                     /translation="MAHPPETRKAVRDSYVVGKLTLEDAADRHDVPFDTARKWKSTDA
                     AKGEDWDKARSAHSLTASGAGTIAQLVLHDFLAMYQDTVEAVKGDTRVSAMQRADTLA
                     KLADAFQKTISAVAKAAPDLGRYAVATELLSDLAAFVAAEFPDHRAAFVEILEPFGAF
                     VAKKYG"
     gene            1112..2770
                     /gene="terL"
                     /locus_tag="VLL76_08970"
     CDS             1112..2770
                     /gene="terL"
                     /locus_tag="VLL76_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HSV29680.1"
                     /translation="MARQPNKKAATAQDFLELLAQMAAEQRRIIETECPGFDLDPKAS
                     AARRRRVLSDDDDAFAYFCRLYFPHYIKGEPSTFHAWLFAHLPKIVRDPAGARELIAA
                     PRGNAKSTVVTLLFTLWTIIRRLKRFPVILSDTFDQAAVHLQAIKSELEFNPRLAADF
                     PDDTGAGPVWQAGEIVTANGAKVKIGGAGKALRGFRHGAQRPDLVIGDDLENDENVKN
                     PEQRDKLEKWIDKTVEPLGPPDGSMDLIWVNTFLHFDAVAMRKSRNPLWRKKIFKAVI
                     HWPDRMDLWEEWERILRNSDPEEAEALADAFYRQHQAEMLAGSEVLWPAVQPLVKLMK
                     IKVRVGDDSFASEYQNEPIDSDAQMFARLAFWTSRLPEWVFVGACDPSMGKQNKGRDP
                     SAIGVAGFNRETGIMDVVEASIRKRVPSVIMADIEALQREYRCIKWGVEIVQFQEFFA
                     QQLVKQSAERGTPIPMVGIRSTIEKALRIESLEPHIRNGLIRLHPSQTVLIEQLRFYP
                     QAAHDDGPDMLEMLWQMAQSIRAGGGIRTGGTRVATGNTLAGFR"
     gene            2767..>3154
                     /locus_tag="VLL76_08975"
     CDS             2767..>3154
                     /locus_tag="VLL76_08975"
                     /inference="COORDINATES: protein motif:HMM:NF017850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HSV29681.1"
                     /translation="MTETDDTKPATAPAVLRTEIASARRDILQPVFGGLMRPTDDVLI
                     QQGGGKGLKIYEELERDPMVLAVLQKRKLAVIARDWEVEPGGTRRDDKKAADLCRRVL
                     SGEWGLSFDKVTLDLLDATLKGYAVAE"
BASE COUNT          528 a         1108 c         1056 g          462 t
ORIGIN      
        1 agggggtcaa gggatgaatt tcgaggagcg cctgtactcg cactaccgcc tggccatcct
       61 gctgtcgctg atcgaggagc cggccgaggc gcgcctgcgc tacgctgtcc tgcgcgtgct
      121 gtcgcgcatc ccggggcggt cggccaacgt cagcatgctg gccaccctgt tgccggccta
      181 cgggttcgcc gtcggccgcg acgaggtcga agcgaccgtc gcctggtgcg accgcgcccg
      241 cctggtcaaa gcggccgagg atgacggggt gctgggtggc ctgctgctgg atctcggccg
      301 cgacgtcgtc gccggccgcg ccaccgtgcc cggcgtcgcg ccggcaccga ccttcgactg
      361 gctgcagcgc aacctggagg ccaagagcat ccgcctcggc atgcccgacg tcatcgccca
      421 ttggtcctgg tgcgccgagc gccgactggc gacctgcgac gaccacgacg acggcgcgct
      481 gttcatcacc ccgctgggca tcgacgtcgc catggggcgc agcgaggtgg aaggcatcca
      541 ggcgccgtcg acctcgacca tcatgcggct ggccggtgcc gccgccgcca cgcgcctggg
      601 cggttgacat ggcccacccg cccgagaccc gcaaggcggt ccgcgattcc tacgtcgtcg
      661 gcaagctgac cttggaggac gctgcggacc gccacgacgt gccgttcgac accgcccgca
      721 agtggaagtc gaccgacgcc gccaagggcg aagactggga caaggcgcgc tcggcccact
      781 cgctgaccgc gtccggcgcc ggcaccatcg cccagctggt gctgcacgac ttcctggcca
      841 tgtaccagga cacggtcgag gcggtgaagg gcgacaccag ggtctcggct atgcagcgtg
      901 ccgacacgct ggcgaagtta gccgatgcct tccagaaaac catttcggcc gtagccaagg
      961 ccgcgcccga cctgggccgc tatgcggtgg ccaccgagct gctgtccgac ctggccgcgt
     1021 tcgtcgccgc cgaattcccc gaccaccgcg ccgccttcgt cgagatcctg gagccgtttg
     1081 gcgcgttcgt cgccaagaag tacggctgac catggcccgc cagcccaaca agaaggccgc
     1141 caccgcccag gacttcctgg agctgctggc gcagatggcg gccgagcagc gccggatcat
     1201 cgagaccgag tgcccgggct tcgacctcga tcccaaggcc tcggccgctc ggcgacgcag
     1261 ggtgctgtcc gacgacgacg acgccttcgc gtacttctgt cgcctttact tcccgcatta
     1321 catcaagggc gagccgtcga ccttccacgc ctggctgttc gcgcatctgc ccaagatcgt
     1381 gcgcgacccc gccggcgccc gcgaactgat cgcggcgccg cgcggcaacg ccaagtccac
     1441 ggtggtgacg ctgctgttca ccctgtggac catcatccgg cgcctcaagc gcttcccggt
     1501 catcctgtcc gacaccttcg accaggcggc cgtccatctg caggccatca agtccgagct
     1561 ggagttcaat ccgcgcctgg cggccgactt ccccgacgac accggcgccg gcccggtatg
     1621 gcaggccggc gagatcgtca ccgccaacgg cgccaaggtg aagatcggcg gcgccggcaa
     1681 ggctctgcgc ggtttccgcc atggggcgca gcgccccgac ctggtcatcg gcgacgacct
     1741 cgagaacgac gagaacgtca agaaccccga acagcgcgac aagctggaga agtggatcga
     1801 caagacggtc gagccgctgg gaccgcccga cgggtccatg gacctgatct gggtcaacac
     1861 cttcctgcat ttcgacgccg tcgccatgcg caagagccgc aatccgctgt ggcgcaagaa
     1921 gatcttcaag gcggtcatcc actggcccga ccgcatggat ctgtgggagg agtgggagcg
     1981 catcctgcgc aacagcgacc ccgaggaggc cgaggccctg gccgatgcct tctaccgcca
     2041 gcaccaggcc gagatgctgg ccgggtccga ggtgctgtgg ccggcggtgc agccgctggt
     2101 caagctgatg aagatcaagg tccgggtcgg cgacgattcc ttcgcgtcgg agtaccagaa
     2161 cgagccgatc gacagcgacg cccagatgtt cgcgcggctg gcgttctgga ccagccggct
     2221 gccggaatgg gtgttcgtcg gcgcgtgcga cccgtccatg ggcaagcaga acaagggccg
     2281 cgatcccagc gccatcggcg tcgccgggtt caaccgcgag accggcatca tggacgtggt
     2341 cgaggcgtcg atccgcaagc gcgtcccgtc cgtcatcatg gccgacatcg aggcgctgca
     2401 gcgcgaatac cgttgcatca agtggggcgt cgaaatcgtc cagttccagg aattcttcgc
     2461 ccagcagttg gtgaagcaga gcgccgagcg cggcacgccg atccccatgg tcgggatccg
     2521 ctcgacgatc gagaaggcgc tgcgcatcga gagcctggaa ccgcacatcc gcaacggcct
     2581 gatccggttg catcccagtc agaccgtcct gatcgagcag ctgcgcttct atccccaggc
     2641 cgcccatgac gatggccccg acatgctgga gatgctgtgg cagatggccc aaagcatccg
     2701 cgccggcggc ggcatccgca ccggcggcac ccgcgtcgcc accggcaaca ccttggcagg
     2761 attccgatga ccgagaccga cgacaccaag cccgccaccg ccccggccgt cctgcgcacc
     2821 gagatcgcgt cggcgcgccg cgacatcctg cagccggtgt tcggcggcct gatgcggccg
     2881 accgacgacg tgctgatcca gcagggcggc ggcaagggcc tcaagatcta cgaggaactc
     2941 gagcgcgacc ccatggtcct ggcggtgctg cagaagcgca agctggcggt catcgcgcgg
     3001 gattgggagg tcgaaccggg cgggacgcgg cgcgacgaca agaaggcggc cgatctgtgc
     3061 cgccgcgtgc tgtcgggcga atggggcctg tccttcgaca aggtgacgct ggatttgctc
     3121 gacgcgacgc tcaagggcta tgcggtggcc gagg
//
LOCUS       DATIKR010000576         4328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_117286, whole genome shotgun sequence.
ACCESSION   DATIKR010000576 DATIKR010000000
VERSION     DATIKR010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117286"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..364
                     /locus_tag="VLL76_08980"
     CDS             233..364
                     /locus_tag="VLL76_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29682.1"
                     /translation="MTTLTSSFRDDVTALALGLGLLAAGAVALIGGSGLAFWIAGMH"
     gene            complement(428..1180)
                     /locus_tag="VLL76_08985"
     CDS             complement(428..1180)
                     /locus_tag="VLL76_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV29683.1"
                     /translation="MEWLTDPQIWISLLTLSALEIVLGIDNLVFLAILADRLPEHQRA
                     TARKLGLAFALITRLILLASLAWIVGLVEPVFTLFGHPVSWRDIILIGGGVFLLAKAT
                     HEIHGSLEGEEDAPTEGGGVAAKAGAGFVSTIIQIGILDIVFSLDSVITAVGMANQIW
                     VMVAAVIVAVAVMLMAAGPLSAFVSKHPTVKMLALSFLLLVGTALVADGMGFHIPKGY
                     LYFAMGFSVLVEALTLVARRKRKPVQLRHPVP"
     gene            complement(1268..1525)
                     /locus_tag="VLL76_08990"
     CDS             complement(1268..1525)
                     /locus_tag="VLL76_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HSV29684.1"
                     /translation="MPESLRIDKWLWFARFFKTRSLAASVVEGGQVWLNGVVVGKCSQ
                     TVKPGDELAFPLGGRLRRVTVVALGERRGPAPEAQGLYRNV"
     gene            1626..>4328
                     /locus_tag="VLL76_08995"
     CDS             1626..>4328
                     /locus_tag="VLL76_08995"
                     /inference="COORDINATES: protein motif:HMM:NF017539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NACHT domain-containing protein"
                     /protein_id="HSV29685.1"
                     /translation="MFGTVLAVLADVGGTVGFVADLLGMQDAPTWRKLAVAGAVALAV
                     TLAVARLRAPGDLGAVAPEVLRRLYLERLGQDVRNRLAASIHGVVMRQALAEKPGAAQ
                     PWGFVAARTGEDARAFGSFDEAFAAFGRRVLLLGPPGAGKTTTLLLLAQRLIATAEAD
                     PAAPVPLMVNLSVLNRQAAGDGMLRRLFGRVLATGQAVAVARQIAALPVQGLTAEAVL
                     AWMEAAQVVLLLDGLDEVGDADMVRMADALNDDLFKQLSQTPTVVACRQLEYEGLAKD
                     VERRLRLDGCVTLQPPSDAEIARYLDEAGATGVRLALPGNQELGDLARNPLTLSVMAL
                     AYRGLPPEALGGTLPRGERRRQLFDLFIDKMMQFEACRRAGRTWDPNGDRLPTRYPLD
                     AVRRHAGWLAAAMAEASKTRFSPRTLRGLIDLSLDYRLTKAGYAVNALSLGMAVALVA
                     GAMGQVGGPFAALVPLAAYAACAGAVWLAERGTGFGRFTGELASTIPLGVAGLGLSAA
                     VPLAAAALTGNAVPAWMIAILILGAAPLLASYSTLVGRGWTIVTLAALAGAMVTLHRA
                     VPAIGALPFAWAVLGVIGVAAVTMVMKDRFFLPIIMVYLGVPAGWSYLFGKGIPFGDI
                     WVGALMGTLAALPLALTVDALVLPFIVALAAAAGGQLVAGPPGALAAVGMTVVLLPAF
                     LRDAEVERVLDRMRALPCRLALKLTGRVPWRFVDFLRYCEAILVLRRAGGGDMEFGHL
                     LLRDHFGTNRLAPRLGVGSPEDRIVVINELARQGDAAIDHLLSEARAPAPAVRRAAIA
                     ALARIPAADEAIMIEALGQETDPSDLAAAFPKLKRLPETRGLQALFLRTPEAQRALAR
                     FLGDDRMTIPRIEPAILRRLILAADDEDLDKLLQHRRFPIPPVAT"
BASE COUNT          614 a         1498 c         1514 g          702 t
ORIGIN      
        1 cttctccgcc ggccttggcg tcgcggccgg acagcaggtc cttgaacatt ccgatcatgg
       61 cggctccagg ctcgcggcca gtacggggcg gtcgcggggt gatcgcgaag cgataacata
      121 gcggccccgg ccactcaacc ccacgagcct tgtggttatg gcatgaccgg gatcaaggcc
      181 cgcccggtcg ggtggcgcga cactgctcca tcagcacaac ggagacccac ccatgaccac
      241 cctgacctcc tcgttccgcg acgacgtgac cgccctggcc ctcggcctcg gcctgctggc
      301 cgccggtgcg gtggcactga tcggcggcag cggcctcgcc ttttggatcg ccgggatgca
      361 ttgagctttg cccttggcgg ccgcccctcc ggggcgagcc aagctcaggc gccgctcggg
      421 cttatcctta cggaaccggg tggcgcagtt gcaccggctt gcgcttgcgg cgcgccacca
      481 gggtcagagc ttcgaccagc accgagaagc ccatggcgaa gtacagatag cccttgggga
      541 tgtggaagcc catgccgtcg gccaccagcg cggtgccgac cagcagcagg aacgacagcg
      601 ccagcatctt gacggtggga tgcttggaca cgaaggccga cagcggcccc gccgccatca
      661 gcatcaccgc caccgccacg atcaccgccg cgaccatgac ccagatctgg ttggccatgc
      721 ccaccgccgt gatgaccgaa tccagcgaga acacgatgtc gaggatgccg atctggatga
      781 tggtcgacac gaaaccggcg cccgctttgg cggcgacgcc gccgccctct gtcggggcat
      841 cctcctcgcc ttccagcgag ccgtggatct cgtgggtcgc cttcgccaag aggaacacgc
      901 cgccgccgat caggatgatg tcgcgccacg acaccgggtg gccgaacagg gtgaacaccg
      961 gctcgaccag tccgacgatc caggccagcg aggccagaag gatcaggcgc gtgatcagcg
     1021 cgaaggcaag gcccagcttg cgcgcggtgg cgcgctgatg ctcgggcagg cggtcggcca
     1081 ggatggcgag gaagaccaga ttgtcgatgc cgagaacgat ctcgagcgcc gacagggtga
     1141 gcaggctgat ccagatctgc ggatcggtga gccattccat ggccggggcg tcccttgcgg
     1201 tttgatcaag cggcgcagag tgtaaggaag tttcgcaaga tttaaagggg cagtcgttcg
     1261 cgcggggtca gacgttgcga taaagcccct gcgcctcggg cgccggaccg cgccgctcgc
     1321 ccaacgccac cacggtgacg cggcgcaggc ggccgcccag cgggaaggcc agttcgtcgc
     1381 ccggcttgac ggtctggctg cacttgccga ccaccacccc gttcagccac acctgcccgc
     1441 cctccaccac cgacgccgcc aggctgcgcg tcttgaagaa ccgcgcgaac cacagccatt
     1501 tgtcgatgcg cagggactca ggcatggggc aaacccgcga aacatggcat gataggccaa
     1561 gtcttctacc atacatgggg cgtgggcggg tgcgccgaat tccgacatgg ggggtgttgg
     1621 ccggggtgtt cggcaccgtc ctcgcggtcc tggccgacgt cggtgggacc gtcgggttcg
     1681 tggccgacct tctcggcatg caggacgcgc ccacctggcg gaagctggcg gtggcgggag
     1741 cggtcgccct agccgtcacg ctggcggtcg cccgtctgag ggcgccgggc gaccttggcg
     1801 cggtggcgcc cgaagtcctg cgacggctct atcttgaacg cctggggcag gatgtccgca
     1861 accggctggc cgcctccatc cacggcgtgg tcatgcgcca ggcgctggcc gaaaagcccg
     1921 gcgccgccca gccgtggggc ttcgtcgcgg cgcggaccgg cgaggacgcc cgcgccttcg
     1981 ggtcattcga cgaggccttc gcggcctttg gccggcgcgt gctgctgctc ggccccccgg
     2041 gcgcgggcaa gaccacgacg ttgctgctcc tcgcccagcg gctgatcgcc accgccgagg
     2101 ccgatcccgc cgcgccggtg ccgctgatgg tcaacctcag cgtcctcaac cggcaggccg
     2161 ccggcgacgg catgctgcgg cggctctttg gccgggtcct cgccaccgga caggcggtcg
     2221 ccgtggcacg gcagatcgcg gccctgcccg tccagggcct gaccgccgag gcggtcctcg
     2281 cctggatgga ggcggcgcag gtggtgcttc tgctcgacgg cctcgacgag gtcggggatg
     2341 ccgacatggt gcggatggcc gacgccttga acgacgattt gttcaagcaa ctatcgcaga
     2401 cgccgaccgt cgtcgcctgc cgacagctgg aatacgaagg cctggccaag gacgtcgagc
     2461 ggcgcctgcg gttggacggg tgcgtgaccc tgcagccgcc gtccgacgcc gagatcgcgc
     2521 gctacctcga cgaggccggg gccaccggcg tccgcctcgc cctgccgggg aaccaggagc
     2581 tgggcgacct ggcccgcaac ccgctgacgc tgagcgtcat ggccctggcc tatcgcggcc
     2641 tgccgcccga ggcgctgggc ggcactctgc cgcgcggcga gcggcgccgc cagctgttcg
     2701 acctgttcat cgacaagatg atgcagttcg aggcctgccg tcgcgccggc cgcacctggg
     2761 accccaacgg cgaccgcctg ccgacgcgtt acccgctgga tgccgtgcgg cgccacgccg
     2821 gctggctggc cgccgccatg gccgaggcgt cgaaaacccg gttctcgccg cgaacgctgc
     2881 gtgggctgat cgatttgtcg ctcgactacc gcttgaccaa ggccggctat gccgtcaacg
     2941 cgctttccct gggcatggcg gtggccttgg ttgcgggcgc gatgggacag gttggcggtc
     3001 cattcgccgc gctggttccc ctggccgcct acgccgcatg tgccggcgcg gtgtggctcg
     3061 ccgagagggg caccggcttc ggccggttca ccggtgagtt ggcgtccacg ataccgttgg
     3121 gggtcgccgg cttgggcctg tcggccgcgg tccctttggc cgccgccgcg ttgaccggga
     3181 atgccgtgcc tgcatggatg atcgcgatcc tgatcctggg cgcagcccct ctgctcgcct
     3241 cctattccac gcttgtcgga cgtggatgga cgatcgtcac cttggcggcg ctcgcggggg
     3301 cgatggtgac gcttcaccgg gcggttccgg cgatcggcgc attgccattc gcctgggccg
     3361 tccttggagt gatcggtgtg gcggcggtga cgatggtcat gaaggatcgt tttttcctgc
     3421 cgataatcat ggtttacctc ggggtcccgg cagggtggtc ctatctgttc ggcaagggga
     3481 tccctttcgg cgacatctgg gtcggcgccc tgatgggaac cctggccgcc cttccgcttg
     3541 ccttgaccgt cgacgccctc gtcctgccgt tcatcgtcgc cctggctgcg gcagccgggg
     3601 ggcaactcgt cgccgggccg cccggggcgc tggcggcggt gggcatgacg gtggtgctct
     3661 tgccggcctt cctgcgcgac gccgaggttg agcgggtcct tgaccggatg cgggcactgc
     3721 cgtgccgcct cgccctcaag ctgaccgggc gcgttccgtg gcgtttcgtg gacttcctgc
     3781 gttattgcga ggcgatcctg gtgttgcggc gggcgggcgg cggcgacatg gagttcggcc
     3841 atctgctgct gcgcgaccat ttcggcacca accgtcttgc cccgagattg ggggtcggca
     3901 gccccgagga tcggatcgtc gtcatcaatg aattggcccg ccaaggcgac gccgcgatcg
     3961 accatctgct gtccgaggcg cgcgcccccg ccccggccgt ccgacgcgcc gcgatcgcgg
     4021 cgctggcacg gatcccggcg gccgacgaag cgatcatgat cgaggcgctc ggacaggaga
     4081 cggacccgtc ggacctggcg gccgcgtttc cgaaactcaa gcgactgccc gagacgcggg
     4141 gcttgcaggc gctgttcttg cggacgcccg aggcacagcg ggcattggcg cggtttctgg
     4201 gcgacgacag gatgaccatc cccaggatcg agcccgcgat cctgcgccgg ctgattctcg
     4261 ccgccgatga cgaagacctg gacaagctgc tgcagcatcg gcggtttccc atcccgcccg
     4321 tggcgacc
//
LOCUS       DATIKR010000577         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_105250, whole genome shotgun sequence.
ACCESSION   DATIKR010000577 DATIKR010000000
VERSION     DATIKR010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105250"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..478)
                     /locus_tag="VLL76_09000"
     CDS             complement(26..478)
                     /locus_tag="VLL76_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HSV29686.1"
                     /translation="MIRVQQGDFDPGAELAAFGAGNGKVGGICMFLGLVRDFMGDGTS
                     VGGMTLEHYPGMTERQLEAIEAEARRRWPLEDALVIHRHGRLDPGDRIVLVATASAHR
                     EAAFEACHFLIDWLKTKAPFWKIEHTEAGDHWVEAKDSDDRAAERWKE"
     gene            complement(481..732)
                     /gene="moaD"
                     /locus_tag="VLL76_09005"
     CDS             complement(481..732)
                     /gene="moaD"
                     /locus_tag="VLL76_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HSV29687.1"
                     /translation="MKVLYFAWLRAKVGSGEELLVPPEDVATVGALIDWLKTRSPGHA
                     DALADLKVVRVAVNQDYVGLDAAVKPGDEVAFFPPVTGG"
     gene            complement(729..1223)
                     /gene="mobB"
                     /locus_tag="VLL76_09010"
     CDS             complement(729..1223)
                     /gene="mobB"
                     /locus_tag="VLL76_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HSV29688.1"
                     /translation="MRVFGFSGHSGSGKTTLLTKLIPWLGDRGLRVSTIKQANQGFDV
                     DKPGKDSFEHRAAGASEVLVASAVRWALMHEYRGEPELTQDQLLARMSPVDLVLVEGF
                     RRWSHPRVEVWRAALGKDPIFPDDSLVAAVASADPVPGLDRPLLPLDDVDAIGRFVLK
                     EVGL"
     gene            complement(1229..>1711)
                     /gene="pgsA"
                     /locus_tag="VLL76_09015"
     CDS             complement(1229..>1711)
                     /gene="pgsA"
                     /locus_tag="VLL76_09015"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HSV29689.1"
                     /translation="AAVTDWFDGYLARSRNQTSAFGRFLDPIADKLLVAAVLFMLVAF
                     DRVSQWSELPALVILLREILVSGLREFLAEVRVGMPVTKLAKWKTGIQMVALPVLLVG
                     DKGPQALPVQEIGEVFLWAAAILTMITGWDYLQSGLKHLRADAAHKPDKAGAGARPAE
                     "
BASE COUNT          274 a          607 c          573 g          257 t
ORIGIN      
        1 ccctctcccg caagcgggcg agggtttatt ctttccaccg ttcggccgcc cggtcgtcgc
       61 tgtccttggc ctcgacccag tggtcgccgg cttcggtgtg ttcgatcttc cagaacggcg
      121 ccttggtctt cagccagtcg atcaggaaat ggcaagcctc gaacgcggcc tcgcggtggg
      181 cgctggcggt ggcgaccagg acgatgcggt cgccggggtc gaggcggccg tgacggtgga
      241 tgaccaaggc atcctccagc ggccagcggc ggcgggcttc ggcctcgatg gcctcgagct
      301 gacgttcggt catgccggga tagtgttcca gggtcatgcc gccgacgctg gtgccgtcgc
      361 ccatgaaatc gcgcaccagc cccaggaaca tgcagatacc gccgaccttg ccgttgccgg
      421 cgccgaaggc cgccaactcg gcgccggggt cgaaatcgcc ctgctgcacg cggatcatgg
      481 tcagcccccg gtgacgggcg ggaagaacgc cacctcgtcg cccggcttca ccgcggcgtc
      541 gaggccgaca taatcctggt tgaccgccac ccgcaccacc ttgaggtcgg ccagggcgtc
      601 ggcatggccg ggagagcggg tcttcagcca gtcgatcagg gcgccgacgg tggcgacgtc
      661 ctcgggcgga accaacaact cctcgccgct gccgaccttg gcgcgcagcc aggcgaaata
      721 cagcaccttc acagccccac ctccttgagc acgaagcggc cgatggcatc gacgtcgtcg
      781 agtggcagca gcgggcggtc gaggccgggc accgggtcgg ccgaggccac cgccgccacc
      841 agggaatcgt cggggaagat cgggtccttg cccaatgccg cccgccacac ctcgacgcgg
      901 ggatggctcc agcggcggaa cccttcgacc agcaccaggt cgaccgggct catgcgcgcc
      961 agcaactggt cctgggtcag ctccggctcg ccccggtatt cgtgcatcag cgcccagcgc
     1021 acggccgagg ccaccagcac ctcgctggcg ccggcggcgc gatgttcgaa agaatccttg
     1081 cccggcttgt ccacgtcgaa gccctggttg gcctgcttga tggtggacac ccttagcccg
     1141 cgatcgccca gccagggaat gagcttggtc aacagggtcg tcttgccgct gccggaatgg
     1201 cccgagaagc cgaagacgcg catttgggtc attcggccgg gcgcgccccg gcgccggcct
     1261 tgtcgggctt gtgcgccgcg tcggcgcgca ggtgcttgag ccccgattgc aggtagtccc
     1321 agccggtgat catggtcagg atggcggcgg cccacagaaa gacctcgccg atttcctgca
     1381 ccggcaacgc ctgcggcccc ttgtcgccca ccagcagcac cggcagcgcc accatctgga
     1441 tgccggtctt ccacttggcc agcttggtga ccggcatgcc gacccgcacc tcggccagga
     1501 actcgcgcag gcccgagacc aggatctcgc gcagcaggat caccagcgcc ggcagctcgc
     1561 tccattgcga cacgcggtcg aacgccacca gcatgaacag caccgccgcc accagcagct
     1621 tgtcggcgat ggggtcgagg aagcggccga aggccgaggt ctggttgcgc gaccgcgcca
     1681 gatagccgtc gaaccaatcg gtgacggcgg c
//
LOCUS       DATIKR010000578         3490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_105258, whole genome shotgun sequence.
ACCESSION   DATIKR010000578 DATIKR010000000
VERSION     DATIKR010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3490
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105258"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /gene="gloB"
                     /locus_tag="VLL76_09020"
     CDS             complement(<1..489)
                     /gene="gloB"
                     /locus_tag="VLL76_09020"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HSV29690.1"
                     /translation="MARLVIDVVPVLADNYVWLVHDPDSGATAAIDPAVAGPVLDAVA
                     ARGWRLTHILNTHHHGDHTGGNLEIKRATDATVVGCRADAARIPAIDVEVGDGDVFLL
                     GNAAATVFEVPGHTVGHIAYWFADNQALFCGDTLFSLGCGRMFEGDPAQFWTSLSRLR
                     ALP"
     gene            complement(501..1151)
                     /locus_tag="VLL76_09025"
     CDS             complement(501..1151)
                     /locus_tag="VLL76_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HSV29691.1"
                     /translation="MGTPDPKSFIQENCEVSTPPACPEVKLWMATEVTPLWEATEQAL
                     MRINLPPPYWAFCWAGGQALTRHVLDRPDLVKGKRVLDFAAGSGVTAIAAALNGAARV
                     EAVDIDRIACAAMELNAELNGVTVEVVHEDIVGCPNRWDVVVAGDVCYEQPMTQHIWP
                     WLKSLAADGATVIMADPGRAYLPKQGLLEVDRMIVATSLDLEDRTQREVVVYKIVG"
     gene            complement(1309..2226)
                     /gene="ubiA"
                     /locus_tag="VLL76_09030"
     CDS             complement(1309..2226)
                     /gene="ubiA"
                     /locus_tag="VLL76_09030"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HSV29692.1"
                     /translation="MTPAPALHGDIPVGNWIDRWAPKAARPYLRLMRIDRPIGTWLLL
                     FPCWWSAALAAEGWPDPWLFALFAIGAVVMRGAGCTVNDIADHKFDAQVERTRGRPIP
                     SGTVSLWQAAAFLGLQLAVGLLVLVQLNPFTMAVGAASLLLVFPYPLMKRITYWPQAW
                     LGLTFNWGALVGWAAVTGGIGLPALLLYAAGIVWTLGYDTIYAHQDKDDDALIGVKST
                     ALRLGDATPRWLVFFYGTALALIAAAGWSAGLSWAFWPLLALAGAQLAWQVATVNIDD
                     SADCLSKFKSNRFFGWALLAAIVAGKVVG"
     gene            complement(2231..2866)
                     /locus_tag="VLL76_09035"
     CDS             complement(2231..2866)
                     /locus_tag="VLL76_09035"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HSV29693.1"
                     /translation="MTVEVKICGITDEDNLDAAVEAGADYIGLVFFAKSPRYIAPADA
                     AELVQLLDDVKKVGLVVDPDDALLDEVMTHLRLDLLQLHGSESPERLDYIRQEYGVPV
                     MKVIPVSTADDLKAAEAYYDGADCLLFDAKPPKGSELPGGNAVSFDWSILAGFSCPLP
                     WMLAGGLTPANVAEAIKVTGAKAVDVSSGVERAPGIKDPAKIRAFIQAAKG"
     gene            complement(2863..>3490)
                     /gene="pyrF"
                     /locus_tag="VLL76_09040"
     CDS             complement(2863..>3490)
                     /gene="pyrF"
                     /locus_tag="VLL76_09040"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HSV29694.1"
                     /translation="SLRGLVGGIKLGLEFYTANGPAAVEQVSALGMPVFLDLKLHDIP
                     NTVAGGMKGVARLKPALTTIHASGGSEMMKAAVASAREHSPATKVLAVTILTSIDQAA
                     MTEIGYPGAVADQVLRLAELAKASGIDGLVCSPHEVEAVRRAVGPGMTLVVPGIRPAW
                     AEAGDQKRIMTPRQAIERGADVLVIGRPITGASDPAEAARKIAEELAP"
BASE COUNT          558 a         1180 c         1223 g          529 t
ORIGIN      
        1 cggcagcgca cgcaggcgcg acaggctggt ccagaattgc gccgggtcgc cctcgaacat
       61 gcggccgcag cccagcgaga acagcgtgtc gccgcagaac agcgcctggt tgtcggcgaa
      121 ccaataggcg atgtggccga cggtgtggcc gggcacttcg aacacggtgg cggcggcgtt
      181 gcccagcagg aagacgtcgc cgtcgcccac ttcgacatcg atggctggga tgcgggccgc
      241 gtcggcgcgg catcccacga ccgtggcgtc ggtggcgcgc ttgatctcga gattgccgcc
      301 ggtgtggtcg ccgtgatggt gggtgttgag gatgtgggtc agccgccagc cgcgtgccgc
      361 cacggcatcg agcaccggcc ccgccacggc ggggtcgatg gcggcggtgg cgccgctgtc
      421 ggggtcatgc accagccaga cgtaattgtc cgccagcacc gggaccacgt cgatcacaag
      481 ccgggccatg gcgcctcctc ctatcccacg atcttgtaga ccaccacctc gcgctgcgtg
      541 cggtcttcca ggtccaggct ggtggcgaca atcatgcgat cgacctccag caggccctgc
      601 ttgggcaggt aggcccgccc cggatcggcc atgatgacgg tggcgccgtc ggcggccaag
      661 gacttcagcc acggccagat atgctgcgtc atcggctgct cgtagcagac gtcgccggcc
      721 accaccacgt cccagcgatt ggggcagccc acgatgtctt catgaacgac ttcgaccgtc
      781 accccgttca gttcggcatt caattccatg gcggcgcagg cgatgcggtc gatatcgaca
      841 gcctcgaccc gggcggcgcc gttcagcgcg gcggcgatgg ccgtcacccc cgagccggcg
      901 gcgaaatcca gcacccgctt gcccttgacc aggtcgggac ggtccagcac atggcgcgtc
      961 agcgcctggc cgccggccca gcagaaggcc caatagggcg gcggcaggtt gatccgcatc
     1021 aacgcctgct cggtggcctc ccacaggggc gtgacctcgg tcgccatcca cagcttgacc
     1081 tcggggcagg ccggcggggt cgagacctcg cagttttcct ggatgaagga tttggggtcg
     1141 ggggtgccca ttggcgctgc cttggtggtg caaagcccca gttcagtgtg ttccggccgt
     1201 ctttgcaaca tccaatcaat ggggacacgg atgaacacgg atggcgcctg cggcgccgct
     1261 catccgtgtt ggccgcgtag cggccatccg tgtcttattg accagcgatc agccgaccac
     1321 cttaccggcg acgatggccg ccaacagggc ccagccgaag aaccggttgg acttgaactt
     1381 gctcaggcaa tcggccgaat cgtcgatgtt gaccgtcgcc acctgccatg ccagttgcgc
     1441 gccggccaac gccagcagcg gccagaatgc ccaggacagg ccggcgctcc agccggcggc
     1501 ggcgatcagt gccaaggcgg tgccgtaaaa gaaaaccagc cagcgcggcg tggcgtcgcc
     1561 caggcgcagg gcggtggact tgacgccgat cagggcgtcg tcatccttgt cctggtgggc
     1621 atagatggtg tcgtagccca gcgtccacac gatgccggcg gcatacaaca gcagcgccgg
     1681 caggccgatg ccgccggtca ccgccgccca gccgaccagg gcgccccagt tgaaggtcag
     1741 gcccagccag gcctgcggcc aataagtgat gcgcttcatc agcggatagg ggaacaccag
     1801 tagcagcgag gcggcgccca ccgccatggt gaacgggttc aactgcacca gcaccagcag
     1861 gccgacggcc agttgcaggc ccaggaaggc cgccgcctgc cacaggctga cggtgcccga
     1921 gggaatgggg cggccccgcg tgcgctcgac ctgggcatcg aatttgtggt cggcgatgtc
     1981 gttgacggtg cagccggcgc cgcgcatcac caccgcgccg atggcgaaca gcgcgaacag
     2041 ccacgggtcg ggccagccct cggcggccag ggcggcgctc caccagcagg ggaacagcaa
     2101 cagccaggtg ccgatcgggc ggtcgatgcg catcaggcgc agatagggcc gggcggcctt
     2161 tggcgcccag cggtcgatcc agttgccgac cgggatgtcg ccgtgcaggg cgggggccgg
     2221 cgtcacgccg tcaccccttg gcggcctgga tgaacgccct gatcttggcc gggtccttga
     2281 tcccgggggc gcgttccacg cccgacgaca cgtccaccgc cttggcgccg gtgaccttga
     2341 tggcttcggc gacgttggcg ggcgtcaggc cgccggccag catccacggc agcgggcagg
     2401 aaaagcccgc caggatggac cagtcgaacg acaccgcgtt gccgccggga agctccgaac
     2461 ccttgggcgg cttggcgtcg aacagcaggc agtcggcgcc gtcgtaatag gcctcggcgg
     2521 ccttcagatc gtcggcggtc gaaaccggga tcaccttcat caccggcacg ccgtattcct
     2581 ggcggatgta gtccagccgc tcggggcttt ccgagccgtg aagctgcagc aggtcgaggc
     2641 gcaggtgggt catcacctcg tccagcaggg catcgtcggg atcgaccacc aggccgacct
     2701 tcttgacgtc gtccagcaac tgcaccagtt cggcggcatc ggcgggggcg atgtagcgcg
     2761 ggcttttggc gaagaacacc aggccgatgt aatcggcgcc ggcctcgacg gcggcatcca
     2821 gattgtcctc gtcggtgatg ccgcagatct tcacttcgac ggtcatgggg ccaactcttc
     2881 agcaatcttg cgcgccgcct cggcggggtc ggaggcgccg gtgatggggc ggccgatcac
     2941 cagcacgtcg gcgccgcgtt cgatggcctg gcgcggggtc atgatgcgct tctggtcgcc
     3001 ggcctcggcc caggcggggc ggatgccggg caccaccagg gtcatgccgg ggccgacggc
     3061 gcggcgcacc gcctcgacct cgtggggcga gcacaccagg ccgtcgatgc cggacgcctt
     3121 cgccagttcc gccaggcgca gcacctggtc ggcgacggcg ccgggatagc cgatttcggt
     3181 catggcggcc tggtcgatgc tggtcaggat ggtcaccgcc agcaccttgg tggcgggcga
     3241 atgctcgcgg gcgctggcga cggccgcctt catcatttcc gagccgcccg aggcgtggat
     3301 ggtggtcagc gccggcttca gccgcgccac gcccttcatg ccgccggcca ccgtgttggg
     3361 aatgtcgtgc agcttgaggt ccaggaacac cggcatgccc agggccgaaa cctgctcgac
     3421 ggcggccggg ccgttggcag tgtagaattc gaggcccagc ttgatgccgc cgaccagccc
     3481 gcgcaggctg
//
LOCUS       DATIKR010000579         2753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_214491, whole genome shotgun sequence.
ACCESSION   DATIKR010000579 DATIKR010000000
VERSION     DATIKR010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214491"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1672
                     /locus_tag="VLL76_09045"
     CDS             <1..1672
                     /locus_tag="VLL76_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29695.1"
                     /translation="DKNTGEWIITGWAPEEVQFDLAEGCARKGVWSPRARVRGAGAWK
                     EVDGALILHCGDRVYRFPAAGGARPESNEPGVIGEHVYPAYAPTPRPFGDPQTARRED
                     GAGWRLLGLFKTWNWARPQIDPVLLLGWVCAGMIGGAVKFRPMIWMTGEHATGKSTLQ
                     DYIKWLYGTTGLLSVANASAAGIAQTLGYSSLPAALDEQEASADNRKAIGIIELAREA
                     ATGAMRVRGSSDHDARSFNIQSAFAFSSILIPPMEPADVSRFAVLELHKLPEGAKPPN
                     VTEPEINELGRRLLRRMVDGWPRFAATLAAYRDALMVSGRHSGRGADLFGTLLACADL
                     VLSDTLPSADTLARWAERLDATQLAELDGALTDSQQCLQYLLTKTITDQHNRRERTIA
                     AWVSRAHGHESESEGDRIHANEILALHGMKWIPKDGYHYLAVSNNHQGVATLFRDTKW
                     GAAAGTNGGWRQSLGRLDGAVKGHQVKFPPNNRCVLVPLAHFLSDIPAPPGDGQDSSA
                     AGGSPGTASAAGTPPVEASHRSAADTAFDRPGPDPLASTDPFALTDYP"
     gene            2018..2635
                     /locus_tag="VLL76_09050"
     CDS             2018..2635
                     /locus_tag="VLL76_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29696.1"
                     /translation="MDKRSGASKVIAEAAAEAAAAEAAARPAQLSLLDGPDAVDVAEA
                     GERRRRGRTPGAQNVATREMRELVLATNRSPFLTLARTQAQDPVELARYLGCKPIEAM
                     GVILRAADMLMPYLYSKMPTEVDFRGAMPVFNLVTPEAAVEFYAGQAGAGGPVIQMAD
                     FCGSEAMEVALVGQSESDVSAEREADCASQADGHVIWDHGGEAGR"
BASE COUNT          437 a          929 c          993 g          394 t
ORIGIN      
        1 ggacaagaac accggcgagt ggatcatcac cggttgggcc cccgaggagg tgcagttcga
       61 cctggccgag ggctgcgccc gcaagggcgt gtggtcgccg cgtgcccgcg tgcgcggcgc
      121 cggcgcctgg aaggaagtgg acggcgcgct gatcctgcat tgcggcgacc gggtgtaccg
      181 cttccccgcc gccggcggcg ccaggccgga atccaacgag ccgggcgtca tcggcgagca
      241 tgtctatccc gcctatgcgc cgacgccgcg cccgttcggc gacccgcaga cggcgcggcg
      301 cgaggatggc gcgggctggc gcctgctggg gctgttcaag acgtggaatt gggcgcggcc
      361 gcagatcgac cccgtgctgc tgctgggctg ggtgtgcgcc ggcatgatcg gcggcgccgt
      421 caagttccgc cccatgatct ggatgaccgg cgagcacgcc accggcaaat cgacgctgca
      481 ggactacatc aagtggctgt acggcaccac cggcctgttg tcggtggcca acgcgtcggc
      541 cgccggcatc gcccagaccc tgggctacag cagcttgccc gccgcgctgg acgaacagga
      601 ggccagcgcc gacaaccgca aggccatcgg catcatcgag ctggcgcgcg aggcagccac
      661 cggcgccatg cgcgtgcgcg gttcgtcgga ccatgacgcg cggtcgttca acatccaatc
      721 ggccttcgcc ttctcctcga tcctgatccc gccgatggag ccggccgacg tgagccgctt
      781 cgccgtgctc gagctgcaca agttgcccga gggcgccaag ccgcccaacg tcaccgaacc
      841 ggagatcaac gagctggggc ggcggctgtt gcgccgcatg gtcgacggct ggccgcgctt
      901 tgccgccacc ctggccgcct atcgcgacgc gctgatggta tccggccggc attccggccg
      961 tggcgccgat ctgttcggga ccttgctggc ctgtgccgac ctggtgctgt cggacacgct
     1021 gccgtcggcc gacaccctgg cccgatgggc cgagcggctg gacgcgacgc aactggccga
     1081 gctggacggc gcgctgacgg acagccagca atgcctgcag tacctgttga ccaagacgat
     1141 aacggaccag cacaaccggc gcgaacgcac catcgccgcc tgggtgtcgc gcgcccatgg
     1201 ccatgagagc gagagcgagg gcgacaggat ccatgccaac gagatcctgg cgctgcacgg
     1261 catgaagtgg atcccgaagg acgggtacca ctacctggcc gtctcgaaca accaccaggg
     1321 cgtggccacc ctgttccgcg acaccaagtg gggcgcggcc gccggcacca acggcggctg
     1381 gcgccagtcg ctggggcgcc tggacggtgc ggtcaagggc caccaggtca agttcccgcc
     1441 caacaatcgc tgcgtcctgg tgccgctggc ccatttcctg tccgacattc cggccccgcc
     1501 aggggacggg caagactcgt cggccgcagg tggctcgcct ggcacggcct cggccgccgg
     1561 cacgccgccc gtcgaggcga gccaccggag cgcggccgac accgctttcg atcgccccgg
     1621 ccccgacccg ctggcctcga ccgatccctt cgccctcacg gactacccat gaccccgacc
     1681 ccgaccccga ggcgaacgga caagaacggc gcgggccgcc gggtgcgggg gcgttaccgc
     1741 gttaccaggg tgttaccgcg aacgccaagg taggcgcggc cggtaacagg gtaacggtgg
     1801 taacgcctct ttcgaggggc tgacgtgcat gggtgcgtgt gcgggggtga agggatcgcg
     1861 gtgttaccgc tgttacgtcg ttacctctct ctttggagag atgaaaaagg aatgaattca
     1921 gaggggtgac aggtaacggc agaggtaacg gcttggttgg tgggtgttac cgcccgggac
     1981 tggggcggcg gtgaataaaa aattgggatt tggaccgatg gacaagcgaa gcggggcgag
     2041 caaggtgatt gccgaggcgg cggcggaagc ggcggcggcg gaagcggccg cgcggccggc
     2101 gcagttgtcg ctgttggacg ggccggacgc ggtggacgtg gcggaggccg gcgagcggcg
     2161 ccggcgcggc cggacgccgg gcgctcagaa cgtcgccacc cgcgagatgc gcgagcttgt
     2221 cctggcgacg aaccggtcac cgttcctgac gctggccagg acccaggcgc aggacccggt
     2281 cgagctggcg cggtacctgg gctgcaagcc catcgaggcg atgggggtca ttctcagggc
     2341 ggccgacatg ctcatgccct acctctacag caagatgccc acggaggtcg acttccgggg
     2401 cgccatgccg gtgttcaacc tggtgacccc tgaagcggcc gtggagttct acgccggcca
     2461 ggccggcgcc ggtggtcccg tgatccaaat ggctgatttc tgcggttctg aggccatgga
     2521 ggtcgcgcta gttggacagt ccgagtctga cgtttcggcc gaacgcgagg cagactgcgc
     2581 ctctcaggcc gatgggcacg tgatttggga tcacggcggc gaggccggcc gatgactgcg
     2641 cgagccctcg acctggccgg cgccggcagc ccgcgagccc aggcaatccg cgccatcgac
     2701 ggaagcgcct ggggccaccc cccccaaccg ctgtccgccg tcccctgggg ggg
//
LOCUS       DATIKR010000580         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_20269, whole genome shotgun sequence.
ACCESSION   DATIKR010000580 DATIKR010000000
VERSION     DATIKR010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20269"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VLL76_09055"
     CDS             complement(<1..271)
                     /locus_tag="VLL76_09055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV29697.1"
                     /translation="MTHPIAVVFAKETRDNLRDRRSLLSALIYPLLGPLVIAAMLFYL
                     SNVVANRDAVGVTLPVMGAEHAPGLVERLTGQGYRIVPAPADVEAA"
     gene            complement(268..996)
                     /locus_tag="VLL76_09060"
     CDS             complement(268..996)
                     /locus_tag="VLL76_09060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007806673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV29698.1"
                     /translation="MIVVESIAKSFRAVTALDDVSFTAADGSITGLIGPNGAGKTTMM
                     RLLTSVMRPDRGRATIDGFDVATQPMDSLRRLGVLPDVRGLYPRLTTREHLRYVGRLH
                     GMDKAALERRIDELAGMLEMGDILDRRTKGFSRGQSLKVALARALIHDPPNILLDEPT
                     NGLDIASSRAMRALIHSLKEQGRCIVFCSHIMAEVAALCDRLVVLAHGRVVAQGSVEE
                     LFAATGTKAMEEMFLVLTREAAAP"
     gene            complement(993..>1639)
                     /locus_tag="VLL76_09065"
     CDS             complement(993..>1639)
                     /locus_tag="VLL76_09065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HSV29699.1"
                     /translation="YLPVPEVLHADDGLLLMEHVEAGGTMTDAAEEHAAELLARLHAM
                     TWHSYGAERDTVIGGLHQPNPPTARWLDFFRDHRLLFMAAEAHRAGRLPAPLLRRIET
                     LAGRLGEWIEEPARPALIHGDCWGGNVLVRAGRVAAFIDPALYYADPEIELAFTTLFG
                     TFGDPFFRRYGPLRPGFWEVRRDLYNLYPLLVHVRLFGGGYVGDVERIVGRFVP"
BASE COUNT          273 a          547 c          596 g          223 t
ORIGIN      
        1 ccgccgcctc gacgtcggcc ggcgccggga cgatgcgata gccctgcccg gtcaaccgct
       61 cgaccagccc gggcgcatgt tcggccccca tcaccggcag cgtcaccccg acggcatcgc
      121 ggttcgccac cacgttggac aggtagaaca gcatcgccgc gatcaccagc ggccccagca
      181 gcggatagat cagcgccgac agcagcgagc ggcggtcgcg caggttgtcg cgggtttcct
      241 tggcgaagac gacggcgatg ggatgggtca tggcgcggcg gcctcacggg tgaggaccag
      301 gaacatctcc tccatggcct tggtgccggt ggcggcgaac aactcctcca cgctgccctg
      361 ggcgacgacc cggccatgcg ccaggaccac cagccggtcg cacagcgcgg cgacctcggc
      421 catgatgtgg ctgcagaaca cgatgcagcg gccctgctcc ttcagcgagt ggatcagggc
      481 gcgcatggcc cggctggagg cgatgtcgag gccgttggtg ggttcgtcca gcaggatgtt
      541 gggcgggtcg tggatcaggg cgcgggccag cgccaccttg aggctttgcc cgcgcgagaa
      601 gcccttggtg cggcggtcga ggatgtcgcc catctccagc atgccggcca gttcgtcgat
      661 gcggcgttcc agcgccgcct tgtccatgcc gtgcagacgg ccgacatagc gcaggtgttc
      721 gcgggtggtc aggcgaggat agaggccgcg cacgtcgggc agcacgccca agcggcgcaa
      781 cgagtccatg ggctgggtgg cgacatcgaa gccgtcgatg gtggcgcgac cgcgatcggg
      841 ccgcatcacc gaggtcagca accgcatcat ggtggtcttg ccggcgccgt tggggccgat
      901 caagccagtg atggaaccgt cggcggcggt gaacgacacg tcgtcgagcg ccgtcaccgc
      961 gcggaagctc ttggcgatgg actcgacgac gatcatggca cgaaccgccc gacgatgcgc
     1021 tcgacgtcgc cgacgtagcc gccgccgaac agccgcacgt ggacaagcag gggatagagg
     1081 ttgtagaggt cgcgccgcac ctcccagaag ccgggacgca gcgggccgta gcggcggaag
     1141 aacggatcgc cgaaggtgcc gaacagggtg gtgaaggcca actcgatctc ggggtcggcg
     1201 taatacaggg cgggatcgat gaaggccgcc accctgcccg cccgcaccag cacgttgccg
     1261 ccccagcaat cgccatggat cagggcgggc cgcgccggct cctcgatcca ttcgcccagc
     1321 cggccggcca gcgtctcgat ccggcgcagc agcggggctg gcagacggcc ggcacggtgg
     1381 gcctcggcgg ccatgaacag caggcggtgg tcgcggaaga aatccagcca gcgcgcggtg
     1441 ggcgggttgg gctggtgcag cccgccgatg acggtgtcgc gctcggcgcc ataggaatgc
     1501 caggtcatcg catgcagccg cgccagcaat tcggcggcat gctcctcggc ggcatcggtc
     1561 atggtgccgc cggcctcgac atgctccatc agcagcaggc catcgtcggc gtggagcacc
     1621 tccggcaccg gcaggtagg
//
LOCUS       DATIKR010000581         3534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_32267, whole genome shotgun sequence.
ACCESSION   DATIKR010000581 DATIKR010000000
VERSION     DATIKR010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32267"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1002)
                     /locus_tag="VLL76_09070"
     CDS             complement(<1..1002)
                     /locus_tag="VLL76_09070"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HSV29700.1"
                     /translation="MDQAPVLVWLRQDLRLADNAALAAAIDRGGPVVLAYVLDDWGPW
                     PLGSASRWWLHNSLARLAEAVSAKGGMLVLRKGRAEDELPRLAAEIGAAAVQWNRRYE
                     PHERERERRVGKALAGQGVEARDFPGNLLFEPGSVVSREGRPFQVFTAFWRCALGLPT
                     PAAPLPAPERIPAPARAPASLPLEALELLPKIAWWRGMADAWLPGEEGARTRLAEFLG
                     DRLDNYAAMRDRPELPATSRLSPHLTFGEISPRQVWHAVAARSDAAGAETFLKELGWR
                     EFSYALLAAQPDLPDKPLKREFADFPWVEDEAGFDAWRQGLTGYPIVDAGMRQLWQTG
                     "
     gene            1279..1488
                     /locus_tag="VLL76_09075"
     CDS             1279..1488
                     /locus_tag="VLL76_09075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29701.1"
                     /translation="MFDATGFHCRDDHHDECETIDPTAAPLDHVVLKDGRPFAILNAT
                     PALAEYALAGFVQATPGSQWTLARC"
     gene            complement(1693..3405)
                     /locus_tag="VLL76_09080"
     CDS             complement(1693..3405)
                     /locus_tag="VLL76_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV29702.1"
                     /translation="MTPPKATDFCWNEARGQLAGLPGGAINIGFEAADRHVAEGRGDH
                     VALRCLGKRYERRDVSFAELAEQSSRVAAVLKSLGLAAGESVAVLLERGPDLYFAALG
                     AWKAGGVFCPLFTAFGPGPLKARVELSRAKVLIASATLYQRKLAALRDSLPQLQHVLL
                     VPDAEILAGCEDLHALAAKADPKDGAALATAPEAPAFVHFTSGTTGTPKGAVHPHRVV
                     VSHLMTGRQVFSLTAADVYWCTADPGWITNTAYAIVAPLVNGCTSLVDAHDTDPRRWY
                     GILKDENVTVWYTTPTAIRMMMRFGAALARTYRENSLRLAASVGEPLNPEAVAWGEKA
                     LGMPFLDTWWQTETGAIAIANMPGEAKYGSMGKPLPGVEAAVVTRDLSSVKPVTDADA
                     VGELALKADLPSLFGGYLGDSDRTEAAFADGWYLTGDLVRRDADGFFWFVGRSDDMIK
                     SSAHTIGPFEIECALMDHPAVAEIGVVGKPDLLVREVPVAFVSLNPGFEAGDALQAEL
                     LAYARQQLGAAMAPREVHFIDSMPKTTTGKILRRALKSKAVGEPDEAEPRALGAVPGR
                     YDDE"
BASE COUNT          560 a         1248 c         1214 g          512 t
ORIGIN      
        1 gccggtctgc cacaattggc gcatgccggc atcgacgatg ggatagccgg tcagtccctg
       61 gcgccaagcg tcgaacccgg cctcgtcctc gacccacggg aagtcggcga attcccgctt
      121 caacggcttg tcgggcaggt cgggctgggc cgccagcaag gcatagctga actcgcgcca
      181 gcccagttcc ttgaggaagg tctcggcacc agcggcgtcg gaacgggccg ccaccgcgtg
      241 ccacacctgg cgcgggctga tctcgccgaa ggtcagatga ggcgacagcc gcgaggttgc
      301 cggcagctcg gggcgatcgc gcatggcggc gtagttgtcc aggcggtcgc ccaggaactc
      361 ggccagccgg gtccgcgccc cctcctcgcc cggcaaccac gcgtccgcca tgccgcgcca
      421 ccacgcgatc ttgggcagca actccaacgc ctcgagcggc aggctggcgg gagcacgcgc
      481 cggcgccggg atgcgttcgg gcgccggcaa gggcgcggcc ggtgtcggca gcccgagggc
      541 acagcgccag aaggcggtga acacctggaa cggccggccc tcgcggctga ccacgctgcc
      601 gggttcgaac aataggttgc cggggaagtc gcgggcctct acgccttggc cggccagcgc
      661 cttgccgacg cggcgttcgc gctcgcgctc gtgcggttcg tagcgacggt tccactgcac
      721 ggcggcggca ccgatttcgg ccgccaggcg tggcaactcg tcctcggcgc ggcccttgcg
      781 cagcaccagc atcccgccct tggcggacac cgcctcggcc agccgcgcca agctgttgtg
      841 cagccaccag cgcgaggcgg aacccaacgg ccacggcccc caatcgtcga gcacataggc
      901 cagcaccacc gggccgccac ggtcgatggc cgccgccagc gcggcattgt cggccagacg
      961 gaggtcctgc ctcagccaga cgagaacggg ggcctgatcc atgcgatgcg ttctcctcgc
     1021 caaaggggtc acggggatgt ggggattgcg ccgggcgcca tcaatccgcc taggccttgg
     1081 cttccaggcc accccgccgc aaggaggatg cgacccggcg agccccggag ccacatggtg
     1141 tcgcgcgcac ttttggcagg ccggaacgca atggcatatc cccccgatca gggctggcat
     1201 ccgtcccccg accggaatac ctagaggggg ctacacgaga taccccgggc gagaggccct
     1261 ggaccaggga gcaccgcgat gttcgacgcc accggcttcc actgccgcga cgaccaccac
     1321 gatgaatgcg agacgatcga tccgaccgcc gctccgctcg accacgtggt gctgaaggac
     1381 ggccggccct tcgccatcct caacgccacc ccggcccttg ccgaatacgc ccttgccggc
     1441 ttcgtccagg cgacccccgg gtcgcaatgg acgttggcgc gctgctgaag cgcgcgtctc
     1501 cccgggagcg tccgactgga cccggacctt ctggctctct cccctcgaaa ctcgcccctc
     1561 cggcaacgga ggggcttttt cttggctgct tcccattgtc atcctgaggc gcagccgaag
     1621 gatctttcac ccgagccggc agccgcccgt gcctgaaaga tgcttcgcct tcggctcagc
     1681 atgacaccca ggctattcgt cgtcgtagcg accgggaaca gcgcccaacg cccgcggctc
     1741 ggcctcgtcc ggctcgccca ccgccttgga cttgagggcc cggcgcagga tcttgccggt
     1801 ggtggtcttg ggcatggagt cgatgaagtg aacctcgcgc ggggccatgg cggcgcccaa
     1861 ttgctggcgg gcataggcca gcaactccgc ctgcagcgcg tcgcccgcct cgaagcccgg
     1921 attgagcgac acgaaggcca ccggcacctc gcgcaccagc aaatcgggct tgccgaccac
     1981 gccgatctcg gccaccgccg gatggtccat cagggcgcat tcgatctcga acgggccgat
     2041 ggtgtgggcg gaggacttga tcatgtcgtc cgaccggccg acgaaccaga agaagccgtc
     2101 ggcgtcgcgg cgaaccagat cgccggtcag gtaccaaccg tcggcgaagg ctgcctcggt
     2161 gcggtcggaa tctccgagat agccgccgaa cagcgatggc aggtcggcct tcagcgccaa
     2221 ctcgcccacg gcatcggcat cggtgaccgg cttgacgctg gagaggtcgc gggtgaccac
     2281 cgccgcctcg acgcccggca ggggcttgcc catgctgccg tacttggcct cgcccggcat
     2341 gttggcgatg gcgatggcgc cggtctcggt ctgccaccag gtgtccagga acggcatgcc
     2401 cagcgccttt tcgccccagg ccaccgcctc ggggttcagc ggttcgccga cgctggcggc
     2461 caggcgcagg gaattctcgc gataggtccg cgccagggcg gcgccgaagc gcatcatcat
     2521 gcggatggcg gtgggcgtgg tgtaccacac cgtcacattc tcgtccttga ggatgccgta
     2581 ccagcggcgc gggtcggtgt cgtgcgcgtc caccagcgag gtgcagccgt tgaccagcgg
     2641 cgcgacgatg gcataggcgg tgttggtgat ccagccgggg tcggcggtac accaatagac
     2701 gtcggcggcg gtcagcgaga acacctgccg gccggtcatc aaatgcgaca ccacgacgcg
     2761 gtgcggatgg acggcgccct tgggggtgcc ggtggtgccg ctggtgaagt ggacgaaggc
     2821 cggcgcctcg ggcgcggtcg ccagggcggc gccgtccttg ggatcggcct tggcggccaa
     2881 agcgtgcaga tcctcgcagc cggccaggat ctcggcgtcg ggcaccagca ggacgtgctg
     2941 caattgcggc aggctgtcgc gcagcgccgc cagcttccgc tggtacaggg tcgccgaggc
     3001 gatcagcacc ttggcgcgcg acagctcgac gcgggccttg agcgggccgg gaccgaaggc
     3061 ggtgaacagc ggacagaaca cgccgccggc cttccaggcg cctaaagcgg caaaatagag
     3121 gtcgggaccg cgttccagca gcaccgcgac cgactcgccg gcggccaggc ccagcgactt
     3181 cagcacggcg gcgacgcgcg aggattgctc ggccagttcg gcgaaggaga cgtcgcggcg
     3241 ctcgtagcgc ttgcccaggc agcgcagcgc gacgtggtcg ccccggccct cggcgacgtg
     3301 ccggtcggcc gcctcgaatc cgatgttgat ggccccgccg ggcaggccgg ccaattggcc
     3361 gcgagcctcg ttccaacaga aatccgtcgc cttaggcggc gtcattcgtc ctccggccca
     3421 tccgggcata ttggtcgttc aaagcgcgac attctgctga cgaggcccag gttgtgcaac
     3481 gacaggattc gcaaggctgc gatgcatgcg ccttcaggct cgccgcccca gcgt
//
LOCUS       DATIKR010000582         3513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_93782, whole genome shotgun sequence.
ACCESSION   DATIKR010000582 DATIKR010000000
VERSION     DATIKR010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3513
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93782"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VLL76_09085"
     CDS             <1..266
                     /locus_tag="VLL76_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29703.1"
                     /translation="DWRQHVAEQPCYYYEPRAQRGEIADGQKVAIAYAHQVMVPAGVD
                     VTEADRIHGITDRRGASIAGHAFGITRIVRRRDHLLLTLEVAT"
     gene            263..592
                     /locus_tag="VLL76_09090"
     CDS             263..592
                     /locus_tag="VLL76_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29704.1"
                     /translation="MTSRLEWFGDRVKARVREAERKGIDETTAACIDPAKTKVHVKTH
                     LLQGSIQFRPAEEEEGRVIGRWGSFDVNYAFWQEVLPEPRGRAYLRPAADQEYPKLAR
                     RIQANLK"
     gene            589..1008
                     /locus_tag="VLL76_09095"
     CDS             589..1008
                     /locus_tag="VLL76_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HSV29705.1"
                     /translation="MTIPDVVLAAVTYLQADAGVAALAGARVFGAEVPALEAKSMPRQ
                     ALVVRYAGGMGPRDDVPIQAPRLDVWAYGATPGEASALYLAAHGALRALARAVHAGAL
                     LHSAIQGGGPISGRDPDTRWPFVWGSWVITAGEDPAQ"
     gene            1022..1597
                     /locus_tag="VLL76_09100"
     CDS             1022..1597
                     /locus_tag="VLL76_09100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29706.1"
                     /translation="MTATTPYNIIVGPADIYVAPVGEAFPAIDATPAGNWVSLGKTDG
                     GLKITHVRETQEHTVDQSSMTQKVTLTKAAEEIRFSLAEITLETYAKVLDNAVITTTA
                     AIVGTVGNKALPLSTDLPQFAMLIRVPSPYMAANMQYEYPRVQRMDNSEVAYTKDGKT
                     LIPTAWRALEDLSNPGQFGVVRAQHEAALAP"
     gene            1594..2007
                     /locus_tag="VLL76_09105"
     CDS             1594..2007
                     /locus_tag="VLL76_09105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29707.1"
                     /translation="MSKPLLTLSTLVERPVVEIDGAAYEMIVPDDVSLLELARMQRMQ
                     ARVQAISAKAESTEADVAAMAEQLEQLVAMILPELPKPVLERLSDVKRMAIISAFVDT
                     VGAKAGTLPSLTSRPTGANSSPASNASTEDPPATG"
     gene            2043..2249
                     /locus_tag="VLL76_09110"
     CDS             2043..2249
                     /locus_tag="VLL76_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29708.1"
                     /translation="MLPQLQAEDALQRVQEHQAADSWLEADTRRRLIEVWQEQAGALD
                     AQQPRSREEYAQAAAMLGMTFIEE"
     gene            2251..>3513
                     /locus_tag="VLL76_09115"
     CDS             2251..>3513
                     /locus_tag="VLL76_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29709.1"
                     /translation="MADENLGRAVLALTTDDKDLDKGLDAAERKGHSWVQRVGGLVGK
                     GIKAAAIGAVAAAGITAAALGSTIGPASDLAESASKVGVVFGEQADVVKAFADTAAAA
                     LGMTEQEALAAAGTYGNLFRAMNMGEDVSAEMSTALVGLAADLASFNNMDPSEVLDKL
                     RAGLTGETEPLKTLGVNMNQAALEAKALEMGLLDASGEMTAAAKAQAAYAIIMEQTAL
                     AQGDFARTSEGLANQQRILKAQLGDLRATVGAALLPAIEAIIGKVTELAQSEKFQEWI
                     GRLVEGIGVIGEAVGEVVEVITWTLEQGGDLEMVLRNVLSVLLEQLGLTEEQMDGVFE
                     VINKVQDAFLAVTGFIEENAAPILAALAAMLLAVVVPAFVTWAGAAIAAAGATIAAMA
                     PVVLPILAIGAAVALLVKAWEKDWGGIRT"
BASE COUNT          609 a         1114 c         1300 g          490 t
ORIGIN      
        1 ccgattggcg gcagcacgtc gccgagcagc cctgctacta ctatgagccg cgggcccagc
       61 gcggggagat cgccgacggg cagaaggtgg ccatcgccta cgcccaccag gtgatggtgc
      121 cggccggggt ggacgtcacc gaggccgacc gcatccatgg gatcaccgac cggcgcgggg
      181 cgagcatcgc cggccacgcc tttggcatca cgcgcatcgt gcggcgccgc gaccacctgc
      241 tgttgacgct ggaggtggca acgtgacgtc acggctcgag tggttcggcg acagggtcaa
      301 ggcacgggtg cgtgaggcgg agcgcaaggg gatcgatgag acgacggcgg cctgcatcga
      361 ccccgcaaag accaaggtgc acgtcaagac gcacctcctg cagggatcta tccagtttcg
      421 acctgcggaa gaggaagagg gccgcgtgat cgggcggtgg gggagctttg acgtgaacta
      481 tgccttttgg caagaggtgc tgcccgagcc gcggggccgg gcctatctcc ggccagcggc
      541 ggatcaggag tatcccaaat tggcgcgtcg catccaggcg aacctgaaat gaccatcccg
      601 gacgttgtcc tggccgccgt gacctacctc caggccgatg ccggcgtggc ggcgctggca
      661 ggcgcgcggg tgttcggcgc cgaagtgccg gcgcttgagg cgaagtccat gccgcggcag
      721 gcgctggtag tgcgctacgc cggcgggatg gggccgcgcg acgatgtgcc gatccaggcg
      781 ccgcggctcg acgtgtgggc ctacggtgcg acgcccgggg aggcgagcgc gctctatctg
      841 gcggcgcacg gggcgctgcg ggcgctggcg cgcgcggtgc acgccggcgc gctgttgcac
      901 tcggccatcc agggcggcgg cccgatcagc gggcgggatc cggatacgcg ctggccgttc
      961 gtgtggggat cgtgggtaat cactgccggc gaggacccgg cacagtagga ggtacagacc
     1021 aatgaccgca acgactccgt acaatatcat cgtcggcccc gccgacatct atgtcgcgcc
     1081 ggtgggggag gcgttccccg ccatcgacgc cacgccggcg ggcaactggg tcagtctcgg
     1141 caaaacggac ggcggcctga aaatcacgca cgtgcgcgag acgcaggagc acaccgtcga
     1201 ccagtcgagc atgacgcaga aggtgacgct caccaaggcg gcggaggaaa tccgcttcag
     1261 cctggcagag atcaccctgg agacgtacgc caaggtgctg gacaatgccg tgatcaccac
     1321 gacggcggcc atcgtgggca cggtgggcaa caaggctctg ccgctgtcca ccgacctgcc
     1381 gcagttcgcc atgctgatcc gcgtgccgag cccgtatatg gctgccaaca tgcagtacga
     1441 gtacccccgc gtccagcgga tggacaactc ggaggtggcc tacaccaagg acggcaagac
     1501 gctcatcccc acggcgtggc gcgcgctgga ggacctgtcc aaccccggcc agttcggcgt
     1561 ggtgcgggcg cagcatgagg cggcgttggc gccatgagca agcccctcct gaccctctcg
     1621 acgctcgttg agcggcccgt cgtcgagatc gacggcgccg catacgagat gatcgtgccg
     1681 gacgatgtga gcctgctgga gctggcgcgc atgcagcgca tgcaggctag ggtccaggcg
     1741 atcagcgcca aggcagagtc gaccgaggcg gacgtcgcgg cgatggccga gcagctcgag
     1801 cagctcgtgg cgatgatcct gccggaattg cccaagccgg tgctcgagcg gctgagcgac
     1861 gtgaagcgca tggcgatcat ctcggctttt gtggacacgg taggggcgaa ggccgggacc
     1921 ctgccgagcc tgacgagccg gccgactggg gcgaactcat cccccgcctc caacgcttct
     1981 acggaggatc ccccggcgac tggctgagac tgccgctggg gtggctgcgc tgccacctgg
     2041 cgatgttgcc gcagctgcag gcagaggacg cgttgcagcg cgtccaggag caccaggcgg
     2101 cggactcgtg gctggaggcc gacacgcgcc ggcgcctgat cgaggtctgg caggaacagg
     2161 cgggggcgct cgatgcgcag cagccccgga gtcgtgagga gtacgctcag gcggcggcga
     2221 tgttgggcat gacgttcatc gaggaatgag atggcggacg aaaacctggg ccgcgcggtc
     2281 ctggcgctga caaccgatga caaggacctc gacaagggcc tagacgccgc cgagcgcaag
     2341 gggcatagct gggtccagcg cgtcggcggc ctcgttggca aggggatcaa ggccgccgcc
     2401 atcggcgccg tcgccgcggc aggcatcacg gcagcagcgc tcggctcgac catcggcccg
     2461 gcgagcgacc tggccgagtc ggcgagcaag gtcggcgtcg tgttcggcga acaggccgac
     2521 gtggtcaagg cgttcgccga tacggccgcc gcggcgctgg gcatgacgga acaggaggcg
     2581 ttggccgccg cgggcaccta cggcaacctg ttccgcgcca tgaacatggg cgaggacgtg
     2641 agcgccgaaa tgtccacggc gctcgtgggg ctggccgccg acctggcatc gttcaacaac
     2701 atggacccga gcgaggtgct cgacaagttg agggcgggtc tcaccggcga gacggaaccg
     2761 ctcaagacgc tcggcgtgaa catgaaccaa gcggcgctcg aggccaaggc gctcgagatg
     2821 ggactgctcg acgcctcggg tgagatgact gccgcggcca aggcgcaggc ggcctacgcc
     2881 atcatcatgg agcagacggc gctggcgcag ggcgatttcg cgcgcacctc ggagggcttg
     2941 gccaaccagc agcgcatcct caaggcacag ctcggcgacc tgcgagccac agtcggcgcg
     3001 gcgctcctgc cggccatcga ggcgatcatc ggcaaggtca ccgagctggc acagtcggaa
     3061 aagttccagg aatggatcgg gcgactcgtg gaggggatag gcgtcatcgg cgaggccgtc
     3121 ggtgaggtgg tcgaggtcat cacttggacc ctcgagcagg gcggcgacct cgagatggtg
     3181 ctgcgcaacg tgctgtcggt gctgctcgag cagctcgggc tcaccgagga acagatggac
     3241 ggcgtgttcg aggtgatcaa caaggtccag gacgccttcc tggcggtgac ggggttcatc
     3301 gaggagaacg cggcacccat cctggccgcc ctcgcggcga tgctgctggc cgtcgtcgtg
     3361 ccggcgttcg tcacctgggc cggggcagcc atagccgccg ccggggcgac gatagccgcc
     3421 atggcgcccg tcgtgctgcc catcctggcc atcggcgccg ccgtggcgct tctggtcaag
     3481 gcgtgggaaa aggattgggg cgggatcagg acc
//
LOCUS       DATIKR010000583         3025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_142138, whole genome shotgun sequence.
ACCESSION   DATIKR010000583 DATIKR010000000
VERSION     DATIKR010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142138"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..1086
                     /locus_tag="VLL76_09120"
     CDS             208..1086
                     /locus_tag="VLL76_09120"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSV29710.1"
                     /translation="MIAPVITPFDRDLAPEPKRFVAFCRALVGLGLGLAPFGTTGEGN
                     SLSVDERIGLMDALAQGGIPMAKVMPGTGCCALSDTVRLTAHAVKLGCAGALMLPPFY
                     YKGVADEALYRSYSEVIQRVGDERLRVYLYHFPRHAQMPIGHRLVEALIKAYPDTIAG
                     IKDSSGDWLHTEGLCKAFPDLDIFTGSDALLLKTLRAGGAGCIATNVNVNGAAMVELH
                     NRWRDEDADLLQDAIAAFRLAMKDFPLIPAVKALVAIASGDATWRLTRPPQMDMPADQ
                     EAAMVKALAEAGFPVA"
     gene            complement(1090..1773)
                     /locus_tag="VLL76_09125"
     CDS             complement(1090..1773)
                     /locus_tag="VLL76_09125"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29711.1"
                     /translation="MEILLADDHAMVRDGLVPFLERLHPETKVLEAANFSEAMTSAKS
                     SSGLGLAILDLYMPGMNGLQGLSAMRAEFPDLPIVILSGSTKPDDAFQAIEHGANGYV
                     PKTMRGETIIGVLRLVLSGERYIPPFLFEHREAVGQAVAPAGSPNSDPNSPIAQLTPR
                     ERDILDMIVDGAPNKVIARALNLQEVTVKAHLRNMFRKLGVANRTEAARVAIVAGMTG
                     RKGMATAKV"
     gene            complement(1776..>3025)
                     /locus_tag="VLL76_09130"
     CDS             complement(1776..>3025)
                     /locus_tag="VLL76_09130"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29712.1"
                     /translation="QRRAMDMQMMHSARLATLGEMSASIAHEFNQCLHVIRLASEALR
                     MDLADGKLDVARVGKRSDNILSQVDRLTEMVMQMRSISRRETSGKKPFLPQAALDGAV
                     RMVEPLMVADTIRLVRVGSLEGTPALGHQVRLEQVLINLLNNARDAIQDRGPIDGKPG
                     GTVTVTCAVDKAAGRMTIRIRDDGTGVPEDVAVSLFEPFVTTKDGQRGCGLGLSISRG
                     IIQEMGGNLSFQNVSPGAEFTVEMPIAEMAAAPEPPAAVQAPAADVVGEGDADEGAGD
                     DHDDDDLGQRRVLLVDDEALSVMMVGEFLERQGYAVDTAYDGVAALERCETRVYDAVV
                     TDIRMPRMDGRELIRRLEDLQPGTPVIVVTGHLKEGTEADLGANVVAVLAKPFQLLEL
                     RRQLARIESGDWTGIEQLEKEGV"
BASE COUNT          460 a         1013 c         1036 g          516 t
ORIGIN      
        1 gaccccgatg aaaccgacct tcgccattcc ctcgacctcc gtgaagccat ttgccccgcc
       61 cggcccaagc ttgaccgcgc ttatatggaa atattggcgg caaccctggg cattgcaaag
      121 ccgatcggtt aggtttgcgg accatggtgc ctcggacgga gggcaagggc aatgaccgcg
      181 ccggccacta acgaacgtat caggggcgtg atcgcccccg tcatcacgcc gttcgaccgc
      241 gatctggcgc ccgagccgaa gcgcttcgtc gccttctgcc gcgccctggt cggcctcggc
      301 ctggggctgg cgccgttcgg caccaccggc gaaggcaatt cgctgtcggt ggacgagcgc
      361 atcgggctga tggacgcgct ggcccagggc ggcatcccca tggcgaaggt gatgcccggc
      421 accggctgct gcgccctgtc cgacacggtg cggctgaccg cccacgcggt caagctgggc
      481 tgcgccggcg cgctgatgct gccgccgttc tattacaagg gcgtggccga cgaggcgctg
      541 tatcgctcgt attccgaggt gatccagcgg gtgggcgacg aacggctgcg ggtttacctc
      601 taccacttcc cgcgccacgc ccagatgccg atcggccacc ggctggtcga ggcgcttatc
      661 aaggcctatc ccgacaccat cgccggcatc aaggacagct cgggcgactg gctgcatacc
      721 gagggcctgt gcaaggcctt ccccgacctc gacatcttca ccgggtcgga tgcgcttttg
      781 ctgaagaccc tgagggccgg cggcgcgggc tgcatcgcca ccaatgtcaa cgtcaatggc
      841 gccgccatgg tcgagctgca caaccgctgg cgcgacgagg atgccgacct gctgcaggac
      901 gccatcgccg ccttccgcct ggcgatgaag gatttcccgc tgatcccggc ggtcaaggcg
      961 ctggtcgcca tcgcctcggg cgacgccacc tggcggctga cccgtccgcc ccagatggac
     1021 atgccggccg accaggaagc cgccatggtc aaagccctgg ccgaggcggg ctttccggtg
     1081 gcgtgaccgt cacaccttgg cggtcgccat gcccttgcgg ccggtcatgc cggcgacgat
     1141 ggcgacgcgg gccgcctcgg tgcggttggc gacgcccagc ttgcggaaca tgttgcgcaa
     1201 atgggccttc accgtgacct cctgcaggtt caacgcgcgg gcgatcacct tgttgggagc
     1261 gccatcgacg atcatgtcga ggatgtcgcg ctcacgcggg gtcaattggg cgatgggcga
     1321 attggggtcc gaattcgggc tgccggcggg agccacggcc tggcccaccg cctcgcggtg
     1381 ctcgaacagg aagggcggga tgtagcgttc gcccgacagc accagacgca gcacgccgat
     1441 gatggtctcg ccgcgcatgg tcttgggaac gtagccgttg gcgccgtgct cgatggcctg
     1501 gaaggcgtcg tcgggcttgg tcgaaccgga caggatgacg atgggcagat cggggaattc
     1561 ggcgcgcatg gcggaaaggc cctgcaggcc gttcatgccc ggcatgtaga ggtcgaggat
     1621 cgccaggccc agcccgctgg acgacttggc ggaggtcatg gcctccgaaa agttggccgc
     1681 ctccaggacc ttggtttcgg gatgaaggcg ttccaggaag ggcacgagcc cgtcgcgcac
     1741 catggcgtgg tcgtcggcga gcaggatttc catggttaca ctccctcttt ttctaattgt
     1801 tcgatgccgg tccagtcgcc cgattcgatg cgggccaact ggcggcggag ttcgagaagc
     1861 tggaacggtt tcgccagcac ggccaccacg ttggccccca aatcggcttc ggtgccttcc
     1921 ttgaggtggc cggtcaccac gatgacgggc gtgccgggct gcaggtcttc caggcggcgg
     1981 atcagctcgc ggccgtccat gcgcggcatg cggatgtcgg tcaccacggc gtcgtagacc
     2041 cgggtttcgc atcgttccag ggcggcgacg ccgtcatagg cggtgtcgac ggcatagccc
     2101 tggcgctcca ggaactcgcc caccatcatc accgacaacg cctcgtcgtc caccagcagg
     2161 acgcggcgct ggccaagatc gtcgtcgtca tggtcgtcac ccgccccctc gtccgcgtcg
     2221 ccttcgccga ccacgtcggc cgccggagcc tgaaccgccg ccggcggctc gggggctgcg
     2281 gccatttcag cgatgggcat ctcgacggtg aattcggcgc cgggggaaac gttctggaag
     2341 ctgaggttgc cgcccatctc ctggatgatg ccgcggctga tcgacaggcc caggccgcag
     2401 ccgcgctggc cgtccttggt ggtgacgaag ggttcgaaca gactgacggc gacgtcctcg
     2461 ggcacgccgg tgccgtcgtc gcggatgcgg atggtcatgc ggccggccgc cttgtccacc
     2521 gcgcaggtga cggtgacggt gccgcccggc ttgccgtcta tggggccgcg atcctggatg
     2581 gcgtcgcggg cgttgttgag caggttgatc agcacctgtt ccagccgcac ctggtggccc
     2641 agcgcgggcg tgccctccag cgagccgacc cgcaccagcc ggatggtgtc ggccaccatc
     2701 agcggttcga ccatgcgcac ggcgccgtcc agcgccgcct ggggcaggaa cggcttctta
     2761 cccgaggtct cgcggcggct gatcgagcgc atctgcatga ccatctcggt caggcgatcg
     2821 acctgggaca ggatgttgtc tgacctcttg ccgacccggg cgacgtcgag cttgccgtcg
     2881 gccaggtcca tgcgcaacgc ctccgacgcc agccggatga cgtggaggca ctggttgaat
     2941 tcgtgggcga tgctggccga catctcgccc agggtcgcca ggcgcgccga atgcatcatc
     3001 tgcatgtcca tggcgcggcg ctggg
//
LOCUS       DATIKR010000584         1930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_20429, whole genome shotgun sequence.
ACCESSION   DATIKR010000584 DATIKR010000000
VERSION     DATIKR010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20429"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VLL76_09135"
     CDS             complement(<1..666)
                     /locus_tag="VLL76_09135"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HSV29713.1"
                     /translation="MKLLSALVAISLLLAAAGCDKATGDGVRTYPYRIVTTVGMVGDI
                     VRNVAGDEATVEGLLGEGVDPHLYKPTRDDVAALMRADAIFYSGLMLEGKMAEALASL
                     ARDGKPVYGVTERIDEQYLLRPADAEGHYDPHVWMDPAAWSKAVDAVAAALADLDKPN
                     AAYYKANAAAYNKQIAELDSYARRVTSSIPKPQRVLVTAHDAFSYFGRAYDFEVLGIQ
                     GLST"
     gene            779..1441
                     /locus_tag="VLL76_09140"
     CDS             779..1441
                     /locus_tag="VLL76_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013041991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HSV29714.1"
                     /translation="MPSSTVEDYIKQLWVEQQAAGAELVPMGRLAAAMGVVPGTATSM
                     VKTLADSGLVNYEPRSGARLTRGGEQLALHVLRRHRLLEVFLVKVLGMDWSEVHDEAE
                     HLEHVISDKVLERIDDLLGRPSVDPHGDPIPSPKGKMIAAPLLPLAEAPLNHRLRIAR
                     VTDQDAPFLQFLNRAGLMPDTQVTITSREPLADSITLKTAANPALTLGTAAAHKILVQ
                     GA"
     gene            complement(1450..>1930)
                     /locus_tag="VLL76_09145"
     CDS             complement(1450..>1930)
                     /locus_tag="VLL76_09145"
                     /inference="COORDINATES: protein motif:HMM:NF024985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4139 domain-containing protein"
                     /protein_id="HSV29715.1"
                     /translation="KYVILPGEATMYIGTDFVGRSALPLVAIGEQFTAGFGVDPQLQV
                     SRSLVDKTRNIQGGNQVQSFDYRIAISSYKAEPVKMQVWDRLPHGETESVNVTLVKSG
                     KDLSTDAAYLRDDRTKGLLRWDMTVQPGTSGEKAEVITYSFKMEYAREATISNLMSK"
BASE COUNT          330 a          679 c          583 g          338 t
ORIGIN      
        1 ggtgctcagg ccctggatgc ccagcacctc gaagtcgtac gcccgcccga aatagctgaa
       61 cgcatcgtgc gccgtcacca gcacgcgctg gggcttggga atcgagctgg tcacccgccg
      121 ggcgtaggag tcgagttccg cgatctgctt gttgtacgcc gccgcgttgg ccttgtagta
      181 ggcggcattg ggcttgtcga ggtcggcgag ggcggccgcc accgcatcca ccgccttcga
      241 ccaggcggcc ggatccatcc agacgtgcgg gtcgtaatgc ccctcggcat ccgccggccg
      301 gagcagatac tgctcatcga tccgctccgt gacgccatag accggcttgc catcccgcgc
      361 caggctcgcc agcgcctcgg ccatcttccc ttcgagcatc agcccggaat agaagatcgc
      421 gtccgcccgc ataagggcgg ccacatcgtc gcgcgtgggc ttgtacagat gcggatcgac
      481 gccctcgccc agcaacccct ccaccgtcgc ctcgtcgccc gcgacattgc ggacgatgtc
      541 gccgaccatg ccgacggtgg tgacgatgcg atagggatag gtgcggacgc cgtcgccggt
      601 cgccttgtcg cacccggccg ccgccagaag cagggaaatg gccacaaggg ccgaaagcaa
      661 tttcatatgc atatccatag cactctcagt cttgactttg attagtcaaa gtagatatta
      721 tgggcatcag aaggtttgtc aactggtatt tcgagatggc cctgacccgg cgggagtgat
      781 gccaagcagc acagtcgagg attacatcaa gcagctctgg gtcgaacagc aggcggccgg
      841 cgcggagctt gtgccgatgg gacgactggc ggccgcgatg ggtgtggtgc cgggtacggc
      901 cacctccatg gtcaaaaccc tcgccgactc ggggctggtg aattacgagc cgcgctccgg
      961 cgcgcgcctc acccgcggcg gcgagcagct tgcgctgcac gtgctgcgcc gccatcggct
     1021 gctggaggtc ttcctcgtca aggtgctggg aatggactgg tcggaggtcc acgacgaggc
     1081 cgagcacctg gagcacgtga tttccgacaa ggtgctcgag cgcatcgacg acctgctggg
     1141 ccgccccagc gtggaccccc acggcgatcc cattccatcg cccaagggca agatgatcgc
     1201 cgcccccctg ctgccgctgg ccgaagcgcc gttgaaccac cgcctgcgca tcgcccgcgt
     1261 cacggaccag gatgcgccct tcctccagtt cctcaaccgc gccggcctca tgcccgacac
     1321 gcaggtgacc atcacctcgc gcgagcccct cgccgactcc atcaccctca agaccgccgc
     1381 caaccccgcc ctcaccctcg gcaccgccgc cgcgcacaag atccttgtgc agggggcctg
     1441 aaacccatct cacttgctca tcaaattcga aatcgtcgcc tcgcgcgcat actccatctt
     1501 gaacgaatac gtgatcactt cggccttttc gccgctcgtg cccggctgca cggtcatatc
     1561 ccagcggagc aggcccttgg tgcggtcgtc gcgcaggtag gccgcgtcgg tgctgaggtc
     1621 cttgccgctc ttcacgagcg tgacattgac cgactccgtc tcgccgtgcg gcaggcggtc
     1681 ccacacctgc atcttcaccg gctcggcctt gtagctgctg atggcgatgc ggtagtcgaa
     1741 gctctgcacc tggttgccgc cctggatgtt gcgcgtcttg tccacgagcg accggctgac
     1801 ctggagctgc ggatcaacgc cgaaaccggc cgtgaactgc tcgccgatcg ccaccagcgg
     1861 caacgccgac cgccccacaa aatcggtgcc gatgtacatc gtcgcctcgc ccggcagaat
     1921 gacgtacttg
//
LOCUS       DATIKR010000585         3869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_154152, whole genome shotgun sequence.
ACCESSION   DATIKR010000585 DATIKR010000000
VERSION     DATIKR010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3869
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154152"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VLL76_09150"
     CDS             complement(<1..903)
                     /locus_tag="VLL76_09150"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tar ligand binding domain-containing protein"
                     /protein_id="HSV29716.1"
                     /translation="MMLSSVRIGTRLAVLVAVSLLSLGIIGAIGLASTASVNDMLALS
                     ESEAVTPIQRLSRINELSQVNFRQLYAATLHDTTLKAAGYHNHPVTMHTGAIEKNIEQ
                     IDAIWRDYRASEAGKLFEDVAGNFDKANQKLVADGFRPGIALGNAENYVELGVMVTTT
                     VLPLFNEANKQINDLLERHKQVSLELNLAAQRDYQRAKWTIILGGLGIAAALGLGALV
                     VVRSISRPIRSLTHVMDELAAGDHQIAVEGSDRGDELGAMARAVDVFKQGLIRADQMA
                     AAQRAEQESKERRAKVIDNLLKEFN"
     gene            1090..1335
                     /locus_tag="VLL76_09155"
     CDS             1090..1335
                     /locus_tag="VLL76_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29717.1"
                     /translation="MMHACSACRRPVPLTVDEIAILSGAARSPAGMPAADLSADALRA
                     LIRMGYLVKVANDDGGRSPRAMITERGRAWLSANLRP"
     gene            1429..2445
                     /locus_tag="VLL76_09160"
     CDS             1429..2445
                     /locus_tag="VLL76_09160"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSV29718.1"
                     /translation="MERVAVVETIVQLVAQNDRQFLEHVLTDTLCELLPRIGVRLVRI
                     EREGGECVVTLLSRSGEPDDLDIPTDACRCLAEACEPSADGACEMVPVPKGLPFTAAI
                     AVPVADEAGRTFVLISGRVLSKADRKLASGVATIFKNYVNLLGASQTDGLTRLFNRKT
                     FDEKLDSVIAEAANHHAGRPEERRTVHGEGTWLAVADIDHFKAVNDSFGHVFGDEVLL
                     IFSQLMRQTFRREDLLFRYGGEEFAIVLTQTDLAGAWAVLERFRETVAARLIPQVGHV
                     TCSIGFTRVGANEVPTALFGRADQALYYAKQNGRDQVRWHEDLVERGLLTRPGQAAEI
                     ELFA"
     gene            complement(2449..2967)
                     /locus_tag="VLL76_09165"
     CDS             complement(2449..2967)
                     /locus_tag="VLL76_09165"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HSV29719.1"
                     /translation="MTRHVWIIGLAALTAACGNNVEQSAASGGLGGAAVGALVGGPVG
                     AVVGAGIGAGAGTGVEYAQRNDVLDKMTQEGGDQSQAQASGPTNEEVRRAQMALQQQG
                     LYNGPIDGIAGPITRDGVAQFQQRQGLPQTAQLDDLTIDALVGGEQAQTAEVPPTRRQ
                     PAPPAPPPPAPR"
     gene            3135..3764
                     /locus_tag="VLL76_09170"
     CDS             3135..3764
                     /locus_tag="VLL76_09170"
                     /inference="COORDINATES: protein motif:HMM:NF021082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2383 domain-containing protein"
                     /protein_id="HSV29720.1"
                     /translation="MPDAQETLNHLVQIDLDAIRAYDQAIRSCADPSATGMLSGFRED
                     HRRHVDDLSAAIRAQGGEPPERASFSGFAIAGFTAVSASAGLVGTLTVMESNEVVTND
                     AYERALAADLPADTRQLVERNRADEQRHLNAIRARLESLPGGEMMSRAAAIHGTATSA
                     WMNTLRHNLPAALLLGAGAAWMLGGLLSRQRAESRRPEMDTGARSATRH"
     gene            complement(3758..3868)
                     /locus_tag="VLL76_09175"
     CDS             complement(3758..3868)
                     /locus_tag="VLL76_09175"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29721.1"
                     /translation="MAICRRVIERLGGRIWVEPNPEGGSRFTFTLPAADQ"
BASE COUNT          584 a         1301 c         1314 g          670 t
ORIGIN      
        1 gttgaattcc ttcagcaggt tgtcgatgac cttggcgcgc cgttccttgg attcctgctc
       61 ggcccgctgg gcggcggcca tctggtcggc cctgatcagg ccctgcttga acacgtcgac
      121 ggcgcgtgcc atggcgccca gttcgtcgcc ccggtcgctg ccctcgacgg cgatctggtg
      181 atcgccggcg gcaagctcgt ccatcacgtg ggtcagcgag cggatcggcc gcgagatcga
      241 gcgcaccacc accagcgcgc ccaggcccag ggcggcggcg atgccgaggc cacccaggat
      301 gatggtccac ttggcgcgct gataatcgcg ctgggccgcc aggttgagtt ccagcgacac
      361 ctgcttgtgg cgttccagca ggtcgttgat ctgcttgttg gcttcgttga acagcggcag
      421 cacggtggtg gtgaccatga cacccaattc tacgtagttt tcagcgttgc cgagcgcgat
      481 acccgggcgg aacccgtcgg ccaccagctt ctggttggcc ttgtcgaaat tgccggcaac
      541 gtcctcgaac agcttgccgg cctccgaggc gcggtagtcg cgccagatcg cgtcgatctg
      601 ctcgatattc ttctcgatgg ccccggtatg catggtgacc gggtggttgt ggtagccggc
      661 ggccttgagg gtggtgtcgt gcagggtggc ggcatagagc tggcggaaat tgacctggct
      721 cagctcgttg atccggctca ggcgctggat gggcgtgacc gcctcgcttt ccgagagggc
      781 cagcatgtcg ttcaccgagg cggtcgaggc cagcccgatg gcgccgatga tgcccaggga
      841 aagcagtgaa accgcgacaa gcacggccaa ccgagtgccg atcctgacac tgctgagcat
      901 catggtatcc cctgtgtttt gtctctctta ttggttggag accataatgt ggcatagaag
      961 ttggcagaag gttaataacc gattgatacg ttcgtatagg cgttggcggc gtcccttccg
     1021 tttcgtgcaa ccctgcccag cgttctggtg ggtggattcc gaggcgcggc ggggttattt
     1081 cagaaaacca tgatgcacgc ttgttcagcc tgccgtcgcc cggtcccgct cacggtcgac
     1141 gagatcgcca tcctcagcgg tgccgcccgg tcccccgccg gaatgccggc cgctgacctg
     1201 tcggcggacg cgctgcgcgc ccttatccga atgggttacc tggtcaaggt cgccaacgac
     1261 gacggcgggc gctcgccccg cgccatgatc accgaacgcg gccgcgcctg gctttccgca
     1321 aaccttcgcc cctaatgcaa agaccgcatg gcagtcggtt cgccccattg ggggtgcgcc
     1381 gcggcgggcc actgctataa ttgcgtatcg ggaagtggga gatgggcgat ggaacgggta
     1441 gccgtcgtcg agacgatcgt gcaattggtg gcgcagaatg accgccagtt ccttgaacat
     1501 gtgctgaccg acacgctgtg cgaattgctc ccgcgcatcg gcgtgcggtt ggttcgcatc
     1561 gagcgcgaag gcggcgaatg cgtggtcacg ctgctgtcgc gctcgggcga accggatgac
     1621 ttggacatac ccaccgatgc ctgccgctgc ctggccgagg cctgcgaacc gtccgccgac
     1681 ggcgcctgcg agatggtgcc ggtgcccaag ggccttccgt tcaccgccgc catcgccgtg
     1741 ccggtggccg acgaggccgg ccgcaccttc gtgctgatca gtggccgcgt gctcagcaag
     1801 gccgaccgca agctggccag cggcgtggcc accattttca agaactacgt caacctgctg
     1861 ggcgccagcc agaccgacgg cctgacccgg ctgttcaacc gcaagacctt cgacgagaag
     1921 ctggacagcg tgatcgccga ggcggccaac caccatgccg gccggcccga agagcggcgc
     1981 accgtccatg gcgaggggac gtggctggcg gtcgccgaca tcgaccattt caaggcggtc
     2041 aacgacagct tcggccacgt cttcggcgac gaggtgctgc tgatcttctc gcagctcatg
     2101 cgccagacct tccgccgcga ggatctgctg ttccgctatg gcggcgagga attcgccatc
     2161 gtgctgacgc agaccgatct ggccggcgcc tgggccgtgc tggaacgctt ccgcgagacg
     2221 gtggcggccc gcctcattcc gcaggtcggc catgtcacct gcagcatcgg cttcacccgc
     2281 gtgggcgcca acgaagtgcc caccgctctg ttcggccgcg ccgaccaggc gctgtattac
     2341 gccaagcaga acggccgtga ccaggtccgc tggcacgagg acctggtcga acgggggctg
     2401 ctgacccggc ccgggcaggc ggccgaaatc gaattgttcg cctgaacctc agcgcggagc
     2461 cggcggcggc ggagcgggcg gcgccggctg gcggcgggtt ggcggcacct cggcggtctg
     2521 ggcctgttcg ccgccgacca gggcgtcgat ggtgaggtcg tccaattgcg cggtctgcgg
     2581 caatccctgg cgctgctgga attgcgccac gccgtcgcgg gttatgggcc cggcgatgcc
     2641 gtcgatgggg ccgttgtaca ggccctgctg ctgcaacgcc atttgcgccc ggcgcacttc
     2701 ctcgttggtg gggccggatg cctgcgcctg gctctggtcg ccgccttcct gcgtcatctt
     2761 gtcgagcaca tcgtttcgtt gtgcgtactc gacgccggtg ccggctccgg caccgatgcc
     2821 ggcgccgacc accgcgccga ccgggccgcc caccagggcg ccgacggcgg cgccgcccag
     2881 ccctccggag gccgcgcttt gctcgacgtt gttgccgcag gcggcggtca acgccgcaag
     2941 accgatgatc cacacgtggc gagtcatggc gagctccgtg gcaaggggac tgtccccctg
     3001 gcaacaccgg ccacgtcccc tggttcttct ttcgctcggc tcttcgccgt ttgctccccc
     3061 ctggcggacc cgaaagggtg gaacccggtt ccgggcgaag tgttggttcg gcaatcgcca
     3121 gaacggaggt cccgatgccc gatgcccagg agacgctgaa ccacctggtc cagatcgacc
     3181 tcgacgccat ccgcgcctac gaccaagcca tccgctcctg cgccgatccc tcggccaccg
     3241 gcatgctgtc gggctttcgc gaagaccatc gccgtcacgt cgatgacctg tccgccgcca
     3301 tccgcgccca gggcggcgag ccgccggaac gggcgtcgtt cagcggcttc gccatcgccg
     3361 gcttcacggc ggtgtcggcc agcgccgggc tggtcggcac gctgacggtg atggaaagca
     3421 acgaggtggt caccaacgac gcctacgagc gcgccctggc cgccgacctg ccggccgaca
     3481 cccgtcaact ggtcgagcgc aaccgggccg atgaacagcg ccacctgaac gccattcggg
     3541 cccggctgga aagcctgccg ggtggcgaga tgatgagccg cgccgccgcc atccacggaa
     3601 ccgccacctc ggcctggatg aacacgttgc gccacaatct gccggcggcg ctgctgctgg
     3661 gggcgggggc ggcgtggatg ctgggcgggc tgttgtcacg gcaacgggcc gaaagccggc
     3721 gtcccgagat ggacaccggc gcgcgctcgg ccacgcgtca ctgatcggcg gcgggcaggg
     3781 tgaaggtgaa gcggctgccg ccctcggggt tcggttccac ccagatgcgg ccgcccaggc
     3841 gttcgatcac gcggcggcag atggccagg
//
LOCUS       DATIKR010000586         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_238486, whole genome shotgun sequence.
ACCESSION   DATIKR010000586 DATIKR010000000
VERSION     DATIKR010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238486"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1568
                     /locus_tag="VLL76_09180"
     CDS             27..1568
                     /locus_tag="VLL76_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV29722.1"
                     /translation="MGRYALSCFLGTKESAPYIEPLAQDSRFGSAEWQRFPFNVWHQS
                     FLFVEQWWHYATTGVRGVSKHHEAVVEFSARQLLDMLAPSNFPLTNPDVLKATLEQGG
                     QNLVRGFTNLVDDLINTLSGQKPAPAEFRVGGDIACTPGKVVFRNKLIELIQYEPTTD
                     KVHAEPILIVPAWIMKYYILDLSPHNSMVKWLVSQGHTVFMVSWRNPGADDRDLGMGD
                     YRRLGVMAALDAISAIMPKQKVHGVGYCLGGTLLSIAAAAMARAGDDRLASLTLLAAQ
                     TDFEDAGEILLFIDESQVIYLEDMMWDKGYLDTKQMAGAFQMLRSNDLIWSHLIRQYM
                     LGETDKLNDLMAWNMDATRMPYRMHAEYLRRLFVENQLAKGRYQVDGRPVALTDIRVP
                     ICAVGTTKDHVAPWKSVYKVGILTDTDVTFILCNGGHNAGIVSEPGHKHRSYQIATRA
                     DLEPYVDPDTWAEITPKHEGSWWEPWQKWLVQSGSGKQSTPPAMGAKDYPALMQAPGS
                     YVLIP"
     gene            1692..1958
                     /gene="fliN"
                     /locus_tag="VLL76_09185"
     CDS             1692..1958
                     /gene="fliN"
                     /locus_tag="VLL76_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HSV29723.1"
                     /translation="MADTMVGDKPQEAVYDVSVECYAVLGTATLPIAQLLKLGRGAVV
                     ELDRKVNDPVDLYVNRKRIAKAEVVVVEDHLAVTITEVIKRAAD"
BASE COUNT          391 a          689 c          622 g          350 t
ORIGIN      
        1 agaacgccgc cgccaagagc ctgccgctgg gccgctatgc cctgtcctgc ttcctgggca
       61 ccaaggaatc ggcgccctat atcgagccgc tggcccagga ttctcgcttc ggcagcgccg
      121 aatggcagcg cttccccttc aatgtctggc accaatcctt cctgttcgtc gagcaatggt
      181 ggcattacgc caccacgggc gtgcgcggcg tgtccaagca ccacgaggcg gtggtcgaat
      241 tctcggcccg ccagttgctg gacatgctgg cgcccagcaa tttcccgctg accaatcccg
      301 acgtgctgaa ggccacgctg gaacagggcg gccagaacct ggtgcgcggc ttcaccaatc
      361 tggtcgacga cctgatcaac accttgtcgg gccagaagcc cgcccccgcc gagttccgcg
      421 tcggcggcga catcgcctgc accccgggca aggtggtgtt ccgcaacaag ctgatcgagc
      481 tgatccagta cgagccgacc accgacaagg tccacgccga gccgatcctg atcgtgccgg
      541 cctggatcat gaagtattac atcctggacc tgtcgcccca caattccatg gtcaagtggc
      601 tggtgtcgca gggccacacg gtgttcatgg tgtcgtggcg caatcccggc gccgacgacc
      661 gcgacctggg catgggcgac tatcgccgcc tgggcgtgat ggcggcgctg gacgccatct
      721 cggccataat gcccaagcag aaggtccacg gcgtcggcta ttgcctgggc ggcaccctgc
      781 tgtccatcgc cgccgccgcc atggcgcggg ccggcgacga ccgcctggcg tcgctgaccc
      841 tgctggcggc ccagaccgat ttcgaggacg ccggcgagat ccttttgttc atcgacgaaa
      901 gccaggtgat ctacctggaa gacatgatgt gggacaaagg ctatctcgat accaaacaga
      961 tggccggcgc cttccagatg ctgcggtcca acgacctgat ctggtcgcac ctgatccgcc
     1021 aatacatgct gggcgagacc gacaagctca acgatctgat ggcgtggaac atggacgcca
     1081 cccgcatgcc ctatcgcatg catgccgagt atctgcgccg cctgttcgtc gagaaccagc
     1141 tcgccaaggg ccgctatcag gtggacggcc gccccgtcgc gctgaccgac atccgcgtcc
     1201 ccatctgcgc cgtcggcacc accaaggacc acgtggcgcc gtggaaatcg gtctacaagg
     1261 ttggcatcct gaccgacacc gacgtcacct tcatcctgtg caacggcggc cacaacgccg
     1321 gcatcgtctc ggagccgggc cacaagcacc gctcgtacca gatcgccacc cgcgccgacc
     1381 tggaacccta tgtcgatccc gacacctggg ccgaaatcac ccccaagcac gaggggtcgt
     1441 ggtgggagcc gtggcagaaa tggctggtgc agtccggctc gggcaagcaa tcgacaccgc
     1501 cggccatggg cgccaaggat tatccggcgc tgatgcaggc ccccggcagc tatgtgttga
     1561 taccctgaaa aaggtccagt cattcccgct ttccgcgggg atgacggggt tgcggaagat
     1621 tgggcgagtc taatgcctcg ttaaccattg tccgctaaag atagggtgac aacccttagg
     1681 gacgcggtgc gatggcagat accatggtcg gcgacaagcc gcaggaagcg gtctacgacg
     1741 tttccgtcga atgctatgcg gtactgggca ccgccacgct gcccatcgcc cagttgctga
     1801 aactgggccg tggcgccgtg gtggaactcg accgcaaggt caacgacccc gtcgacctct
     1861 acgtcaaccg caagcgcatc gccaaggccg aggtggtggt ggtcgaggac cacctggccg
     1921 tcaccatcac cgaggtgatc aagcgcgcgg cggactgacc cggtttttcg gtgttgaccc
     1981 cgccgcccag gtgggtaggc ttgcgccgcc aaaaaaccaa cccggggtca ccatcaaatg
     2041 aagttcttca tc
//
LOCUS       DATIKR010000587         4652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_93901, whole genome shotgun sequence.
ACCESSION   DATIKR010000587 DATIKR010000000
VERSION     DATIKR010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4652
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93901"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VLL76_09190"
     CDS             complement(<1..249)
                     /locus_tag="VLL76_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010143591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HSV29724.1"
                     /translation="MAAPSSESKDVTDRAAELKRMRLFATGLLVLMFAVFLASTAYAE
                     RWPWLVFVRAFSEAAMVGAVADWFAVVALFRRPFGLPIP"
     gene            287..1432
                     /locus_tag="VLL76_09195"
     CDS             287..1432
                     /locus_tag="VLL76_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV29725.1"
                     /translation="MPDGEDRLSVAVTTGIDAIDPADWDALAGTGNPFVAHAFLAALE
                     RSGSATADTGWLPRHLVVRDEAGKVAAAAPLYLKNHSYGEYVFDWGWAEAYQRAGGRY
                     YPKLQCAIPFTPVTGPRLLGEARLRPVLAAGMVELARQWGVSSVHVTFPTEAEADTLE
                     AAGFLRRLGFQYHWRNQGYRCFDDFLAALSSRKRKQIRKERAAIAAQDLTIATLVGAD
                     VKARHWDAFHRFHSQVVDRKWGSPYLTRAFFDELSASSLGERVVLVWVEQDGRPLAAA
                     FNMLGGDILYGRTWGTRAELPFLHFEACYYRALDFAIAHGLQRVEAGAQGEHKVSRGY
                     LPVATHSAHWIADGALRGPVSRFLVHERLMLAEEMAEQAEAGPFRRA"
     gene            1536..2153
                     /locus_tag="VLL76_09200"
     CDS             1536..2153
                     /locus_tag="VLL76_09200"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29726.1"
                     /translation="MDDFERMTILLVEPHQLVRRILRDILRVLGVGKVTAVDSIEMGY
                     RFVTDTHVDAIFTDWSGSTDAISLLRLLRAVDSPNPFVPVVVMTAFGDREHVREARDE
                     GANEYMLKPFAPHTVASRLKAVSCHPRMFVKCPSFFGPDRRRHSWLDFAGPERRRATK
                     YVDRRCQQAPFPGDDRRGTRAPLPPDRLVKDAFIADHHRTWGAAE"
     gene            2216..2770
                     /locus_tag="VLL76_09205"
     CDS             2216..2770
                     /locus_tag="VLL76_09205"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29727.1"
                     /translation="MIEADPSNRRLLGVVLGKLGVAAVETCSTAREAWEMLEDGLFNL
                     VFLDWSADIDAPVFLRRLRHIENRLRMLPVIVTTGYAEPRYLDRVIAAGANEFVLKPY
                     SRGIIAARLASILNEPRLFIRNDCYFGPDRRRRRAPVASDRRAHQNWAGPDRRRKALG
                     FDGPERRQGLPGFVPLERRSAPRA"
     gene            complement(2767..3591)
                     /locus_tag="VLL76_09210"
     CDS             complement(2767..3591)
                     /locus_tag="VLL76_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV29728.1"
                     /translation="MPAELMELLPFAALLLLAGAGAGIIAGLLGVGGGIVVVPVLYHL
                     FTHLGVDEAVRMKVAVGTSLATIVATAWSSASAHYRRGTVDRDFLTGYGPVIVAGVLL
                     GTAVAAWVRGPVLTGVFAVVALVVAVQIAFGSPDWKLGEKLPKGLPRIGIGTAIGALS
                     AMMGIGGGTMTVPVMTMYGYPVHRAVGTAAAMGFVIGVPGALGFVVGGWDVAGRPPGS
                     FGYVSLVGLALIAPTSMLMAPVGAKLAHKLDTKMLRRVFAVFLGFTSLRMFYGILF"
     gene            3682..4176
                     /locus_tag="VLL76_09215"
     CDS             3682..4176
                     /locus_tag="VLL76_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29729.1"
                     /translation="MPAEGPTPEQQADYLVRKLEQTIRDNRTVRGMSFATWQAIAREE
                     IVNAMRGAERRRLVHDRTVSRLVLVASSALVTVGFWGTVFVVDRSYGLPAALAALGAG
                     SALLFVLADWGIKRATTGWSKKARDERLGRIEDLDRRIKRMESDLKKKMDRLKDKMDE
                     VGPL"
     gene            4173..>4652
                     /locus_tag="VLL76_09220"
     CDS             4173..>4652
                     /locus_tag="VLL76_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV29730.1"
                     /translation="MRKLLIFLAILLAALFGLWRSNVIESALLLSDLGAGARPTLYKK
                     LTPAPERRQVGYAVAGRRHLADLYLPAEKAGAAIVLVPGAAKEGKDDPRLVALASSLA
                     RARFLVLVPDIPSLRALEVSAADREPIADAVRFLAEERKPPAIGIAAISYAAAPAILA
                     "
BASE COUNT          748 a         1695 c         1521 g          688 t
ORIGIN      
        1 cgggatgggc aggccgaacg gacggcggaa cagcgccacc accgcgaacc agtcggcgac
       61 ggcgccgacc atggcggcct cggagaaggc gcgcacgaaa accagccacg gccaccgctc
      121 tgcgtaggcc gtggaggcca ggaacacggc gaacatcagg accaagaggc cggtggcgaa
      181 caggcgcatg cgcttgagtt ccgccgcccg gtcggtcaca tccttggatt cactggacgg
      241 cgccgccatc tcatcctctg gggaacagcg acagggacaa cagcccatgc ccgacggaga
      301 agaccgcctg agcgtggcgg tgacgaccgg catcgacgcc atcgacccgg ccgactggga
      361 cgccctggcg ggaaccggca acccgttcgt cgcccacgcc ttcctggctg cgctggaacg
      421 gtcgggttcg gccaccgccg acaccggctg gcttccccgc catttggtgg tgcgcgacga
      481 ggccggcaag gtggcggctg cggcgccgct gtatctgaag aaccattcct acggcgaata
      541 cgtgttcgat tggggctggg cggaagccta tcagagggcg ggcggccgct actaccccaa
      601 gctccaatgc gccatcccct tcacccctgt caccggcccg cgcctgctgg gcgaggcgcg
      661 gctgcggccg gtgctggcgg cgggcatggt cgagctggcg cggcaatggg gcgtgtcgtc
      721 ggtccacgtc accttcccca ccgaggccga ggccgacacg ctggaggccg ccggcttcct
      781 gcgccggctg ggcttccagt atcattggcg gaaccagggc tatcgctgct tcgacgactt
      841 cctggccgcc ctgtcgtcgc gcaagcgcaa gcagatccgc aaggagcgcg ccgccatcgc
      901 cgcccaggac ctgaccatcg ccaccctggt gggcgccgac gtcaaggctc ggcactggga
      961 cgccttccac cgcttccatt cccaggtggt ggaccgcaaa tggggctcgc cctatctgac
     1021 ccgcgcgttc ttcgacgaat tgtcggcctc aagcttgggc gagcgcgtgg tgctggtctg
     1081 ggtcgagcag gacggccggc cgctggccgc cgcgttcaac atgctgggcg gcgacatcct
     1141 gtacggccgc acctggggca cccgcgccga gctgccgttc ctgcatttcg aggcctgcta
     1201 ttaccgcgcc ctcgacttcg ccatcgccca cggcctgcaa cgcgtcgagg ccggcgccca
     1261 gggcgagcac aaggtcagcc ggggctatct gccggtcgcc acccattccg cccattggat
     1321 cgcggatggc gccttgcgcg ggccggtgtc gcgcttcctc gtccatgaaa ggctcatgct
     1381 ggccgaggaa atggcggagc aggccgaggc cgggccgttc cgccgtgcct gatgcgcatt
     1441 gcgcacacct ctgatgcgcg tcaagaacat ggacggcgga cggccttaag gcgttaaaat
     1501 ttcctgtatg aagacgtcag gcacaggagc aggccatgga cgacttcgaa cgcatgacca
     1561 tcctgctggt ggaaccgcac cagttggtcc gccgaatcct ccgcgacatc ctgcgtgtgc
     1621 tgggcgtcgg caaggtgacg gcggtcgaca gcatcgagat gggttatcgg ttcgtcaccg
     1681 acacccatgt ggacgccatc ttcaccgact ggtcgggatc gaccgacgcc atcagcctgc
     1741 tgcgcctgct gcgcgcggtg gacagcccca acccgttcgt tcccgtggtg gtgatgaccg
     1801 ccttcggcga ccgcgagcat gtgcgcgagg cccgcgacga gggcgccaac gaatacatgc
     1861 tgaagccctt cgcgccgcac acggtggcca gccggctgaa ggcggtgtcc tgccatccgc
     1921 gcatgttcgt gaagtgcccc agcttcttcg gccccgaccg ccgccgccat tcgtggctgg
     1981 atttcgccgg ccccgagcgc cgccgcgcca ccaagtatgt ggaccgccgg tgccagcagg
     2041 cgccgttccc cggcgacgac cggcgcggga cccgggcgcc gttgccgccc gaccggctgg
     2101 tcaaggacgc cttcatcgcc gaccatcacc gtacctgggg agccgctgaa tgatgcccat
     2161 ggtcttgccg ccgccggctc ccgccacgcc tgccccgagt ggctgccgag ttctggtgat
     2221 cgaagccgat cccagcaacc gccgcctgct cggcgtcgtg ctgggcaagc tgggagtggc
     2281 ggcggtagag acctgctcca ccgcccgcga agcctgggaa atgctcgagg acgggctgtt
     2341 caacctggtc ttcctcgact ggtcggccga catcgacgcg cccgtcttcc tgcggcgact
     2401 gcgccacatc gagaaccgcc tgcgcatgct gccggtgatc gtcaccaccg gctatgccga
     2461 gccgcgctac ctggaccgcg tgatcgcggc cggcgccaac gagttcgtgc tcaagcccta
     2521 cagccggggc atcatcgccg cgcgactggc atcaatcctg aacgaaccgc gcctgttcat
     2581 ccgcaacgat tgctatttcg gccccgaccg ccgccgccgc cgcgcgccgg tggcaagcga
     2641 ccgccgcgcc caccagaact gggccggacc cgaccgccgc cgcaaggcgc tgggcttcga
     2701 cggcccggaa cgccgccagg gccttcccgg tttcgtgccg ctggaacgcc gctcggcacc
     2761 gagggcctaa aatagaatcc cgtagaacat ccgtagcgac gtgaacccca ggaacacggc
     2821 gaacacacgg cgtagcatct tggtatcgag cttgtgcgcc agctttgccc ccaccggagc
     2881 catcagcatc gaggtcggcg cgatcagggc cagccccacc agactgacat agccgaagct
     2941 gcccggcggc cgtcccgcca cgtcccagcc gccgaccaca aaccccagag cacccggcac
     3001 gccgatgacg aaacccatgg ccgccgccgt gcccaccgcc cggtgcaccg gatagccgta
     3061 catggtcatc accggcaccg tcatggtgcc gccgccgatg cccatcatgg ccgacagcgc
     3121 gccgatggcg gtgccgatgc cgatgcgggg caggcccttg gggagttttt cgcccagctt
     3181 ccaatccggg ctgccaaacg cgatctgcac cgccaccacg agcgccacca cggcgaacac
     3241 tccggtcagc accggccccc gcacccaggc cgccaccgcc gttcccagca gcacgccggc
     3301 gacgatgacg gggccatagc cggtcaggaa gtcgcggtcc accgtgcccc ggcggtaatg
     3361 ggccgaggcg gaagaccacg ctgtggcgac gatggtggcg agcgacgtgc cgaccgccac
     3421 cttcatgcgc accgcttcat cgacgccgag atgggtgaac aggtgataca gcaccggcac
     3481 caccacgata ccgccgccca cccccaacag cccggcgatg atccccgccc ccgctccggc
     3541 aagcagcagc aaggcggcga agggcaacag ctccatcaat tcggcgggca tggcggctcc
     3601 ggtggcaagg cgacacattc tgtatcagtc gccccggcaa tgctattgtc cgccttgtct
     3661 ttcgccttga gaggattcgc catgcccgcc gagggcccga cgcccgagca gcaggccgat
     3721 tatctggtgc gcaagctgga gcagaccatc cgcgacaacc ggacggtgcg cggcatgtcg
     3781 ttcgccacct ggcaggccat cgcccgcgag gagatcgtca acgccatgcg cggagccgag
     3841 cgccgccgat tggtgcacga ccgcaccgtc agccggctgg tgctggtggc gtcgtcggcg
     3901 ctggtgacgg tgggcttctg gggcacggtg ttcgtggtgg accgctccta tggcctgccc
     3961 gccgcgctgg ccgccctggg cgccggctcg gccctgcttt tcgtcctggc cgattggggc
     4021 atcaagcgcg ccaccaccgg gtggagcaag aaagcccgcg acgaacgcct gggccggatc
     4081 gaggacctcg accgccgcat caagcggatg gaaagcgacc tcaagaagaa gatggaccgg
     4141 ctgaaggaca agatggacga ggtggggccg ctatgaggaa gctcctcatc ttcctggcaa
     4201 tcctcctcgc cgccctgttc ggcctgtggc ggtccaacgt catcgagtcg gcgctgctgc
     4261 tgtcggacct tggcgccggc gcgcggccga ccctttataa gaagctgacg ccggcccccg
     4321 agcggcgcca ggtcggctat gccgtcgccg gccgccgcca tctggccgac ctctatctgc
     4381 cggccgagaa ggcaggtgcc gccatcgtgc tagtgcccgg cgccgccaag gaaggcaagg
     4441 acgatccccg gctggtcgcc ctggcctcgt cgctggcccg cgcccgtttc ctggtgctgg
     4501 tgcccgacat cccgtcgttg cgggcgctgg aggtgtcggc ggccgaccgc gagcccatcg
     4561 ccgacgccgt ccgcttcctg gccgaggaac gcaagccgcc cgccatcggc atcgccgcca
     4621 tctcctatgc cgccgccccc gccatcctgg cg
//
LOCUS       DATIKR010000588         4495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_166020, whole genome shotgun sequence.
ACCESSION   DATIKR010000588 DATIKR010000000
VERSION     DATIKR010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4495
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166020"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VLL76_09225"
     CDS             complement(<1..525)
                     /locus_tag="VLL76_09225"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003045603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29731.1"
                     /translation="MLEVRGLTVAYGAEPVLEKVDLDVPQGGFVSLVGPSGSGKSTVL
                     RAVTRLLKPAAGDIRLEVEPREVGFLFQDDALLPWRTARQNVALGLRIRGIATDKALG
                     MADEWLGRLSLAGLEGRYPRQLSGGQRKRVALAQVLALRPRLLLMDEPFASLDAIVRA
                     RITQDVLRWVEHEHL"
     gene            complement(525..1556)
                     /locus_tag="VLL76_09230"
     CDS             complement(525..1556)
                     /locus_tag="VLL76_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014510148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV29732.1"
                     /translation="MGCCDEPYLSHRIGPLGRRDLLKGIAGVTAFVVSRPALGQGAKL
                     KLAFCGQLLCVVPYEVTRERGHFKDEGLDVELVYTRGGNAAMQALVGGAVDYAGTSFD
                     VALQAFARGAPILRFASTGRLPLFALATAPGTAGSITSVKDLEGKVVAVSGLGNADHA
                     LVLFLMDKAGANPKTVKFATIGTNLYQALRLGQADAGMVQEPALTLLAQAGGRVLVNA
                     MDIEDARRHLGGPFEFMGVAVRKDERDRRLDEMRRLARALAKGLKDTQTIPVEEIIVA
                     LPKELVAGGEQAQLLDILKRYRASLWPDTVAIDKQAVQRVVDAQKAAELIPQSVDATG
                     LLDTTVVPG"
     gene            complement(1803..2222)
                     /locus_tag="VLL76_09235"
     CDS             complement(1803..2222)
                     /locus_tag="VLL76_09235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29733.1"
                     /translation="MHTPKNATAASSAIFSKMLSVKTSREYTEQQVKKTPSPNKIHKV
                     TLPKARDDLLAEGVKDPLSCRVRREHSLGQAVEIPHRKSPNPCARASNDCGSRWNWQG
                     MEKSGRYPGLDPGSICQAGHGSRLALRLAGMTAKSAG"
     gene            complement(2301..2630)
                     /locus_tag="VLL76_09240"
     CDS             complement(2301..2630)
                     /locus_tag="VLL76_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase inhibitor subunit zeta"
                     /protein_id="HSV29734.1"
                     /translation="MAFEDAMSSKGQVSQARFVHENETRFWVRARRNRLLAEWACDLT
                     DETSQAYLRLLLDEDFARRDSEGILLLKIKNDLAGFGVFLPIEEIKDMCDRFERQAWL
                     EMVDERR"
     gene            2899..4032
                     /locus_tag="VLL76_09245"
     CDS             2899..4032
                     /locus_tag="VLL76_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008901 - ferredoxin hydrogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HSV29735.1"
                     /translation="MYDDNIKAETDVEARFGVSRREFMTFCAGLAATMGLPKGADAQI
                     AEAITKKDRPSVIWLHHQECTGCSESLLRSEHPTLEKLILDIISLDYHETLFAAAGHQ
                     AEAARLAAMEKNKGKYILVVEGAIPMKDGGIYCKIGGKTSLELTKEVAAGAAAIISIG
                     SCASWGGMPSTPPNPTGAAGVREALGRTDIVTIPGCPPNPYNFLSTVVHFLTFGKLPA
                     LDKEGRPLFAYGRLIHENCERRAHFDAGRFAMEFGDEGHKKGYCLYKLGCKGPETYAN
                     CPSILFNDVGTGSWPVGTGHPCIGCTEKGIGFAKPIHALAELQNQRPPASYPRAVEEQ
                     GTGATLASSALLVGVAAAAAGAGYKLVGNLGRDEDEDDTSSQG"
     gene            4039..>4495
                     /locus_tag="VLL76_09250"
     CDS             4039..>4495
                     /locus_tag="VLL76_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV29736.1"
                     /translation="MTMKRRDFLRATATGSAAVAACATLAPSPAEARGNLPIPQNAVG
                     LLYDSTLCIGCKACMSACKEANQLPLEDNVGGGLWDTPLDLSGKTYTVIKMYQHGTME
                     HKDKAENGFAHIKRQCLHCADPSCVSACPVTAMTKNPETGIVEYNKDACI"
BASE COUNT          774 a         1560 c         1424 g          737 t
ORIGIN      
        1 cagatgctcg tgctcgaccc agcgcagcac gtcctgggtg atgcgggcgc gcacgatggc
       61 gtcgagcgag gcgaacggct cgtccatcag cagcaaccgg ggccgtagcg ccagcacttg
      121 ggccagggcc acgcgcttgc gctggccgcc cgacaattgc cggggatagc gcccttccag
      181 ccccgccagg ctgaggcgcc ccagccattc atcggccatg cccagcgcct tgtcggtggc
      241 gatgccgcgg atgcgcaggc caagggcgac gttctggcgc gccgtgcgcc acggcaacag
      301 cgcatcgtcc tggaacagga agccgacctc gcgcggttcg acctcaagcc ggatgtcgcc
      361 ggcggccggc ttcagcagcc tggtgaccgc acgcagcacg gtggacttgc ccgaccccga
      421 cgggcccaca agactgacga agccgccctg gggcacgtcc aggtcgacct tctccagcac
      481 cggttcggcg ccataggcga cggtcagccc gcgcacctcc agcatcagcc cggcaccacc
      541 gtggtatcga gcagcccggt ggcgtctacc gattgcggga tcagctcggc cgccttctgg
      601 gcatcgacca cccgctgcac cgcctgcttg tcaatggcca ccgtgtcggg ccacagcgac
      661 gcacggtagc gcttgaggat gtcgagcagc tgcgcctgct cgccgccggc caccaattcc
      721 ttgggcaggg cgacgatgat ctcctcgacc gggatggtct gggtgtcctt cagtcccttg
      781 gcgagggcac gcgccagtcg ccgcatctcg tcgaggcggc gatcgcgctc gtccttgcgc
      841 acggcgacac ccatgaactc gaacgggccg cccaggtggc gcctggcatc ctcgatgtcc
      901 atggcgttga ccagcacccg cccgcccgcc tgggcgagca gcgtcaacgc cggctcctgc
      961 accatgccgg cgtcggcctg gcccaggcgc aacgcttgat agaggttggt gccgatggtg
     1021 gcgaacttga ccgtcttggg attggccccg gccttgtcca tcaggaacag caccagcgca
     1081 tggtcggcgt tgccgaggcc cgagacggcg acgaccttgc cttccaggtc cttgacgctg
     1141 gtgatggatc cggcggttcc gggcgccgtc gccagcgcga acagcggcag ccggccggtc
     1201 gaggcgaagc gcaggatggg ggcgccgcgc gcgaaggcct gcagcgccac gtcgaacgac
     1261 gtgccggcat agtccaccgc gccgcccacc agcgcctgca tggcggcgtt gccgcccctg
     1321 gtgtagacca gttcgacgtc gaggccctcg tccttgaaat gcccgcgctc gcgggtgacc
     1381 tcatagggca ccacgcacag caactggccg cagaaggcga gcttgagctt ggccccctgc
     1441 cccaaggccg gccgcgacac cacgaacgcg gtgacgcccg cgatgccctt gagcaggtcg
     1501 cggcgaccga gcgggccgat ccggtggctg agataaggct cgtcgcagca ccccatggct
     1561 gcctcccatg accgtgtcgg acagcaggtg ggaagtgcgc gccgccaaat ccaatgggat
     1621 tagggggaat gtgccgccga gaccagttgg gccgtcatcc cggccaagcc cgcgtgcgaa
     1681 gcacgcattt agtcgtatgt cggctccgcc gacgtgcgag ccgggatcca tggtgccgcc
     1741 tgacagatgg atcccgggtc gagcccggga tgacgtcctg atttccagca gttccaccac
     1801 ctctagccag cactcttggc ggtcatcccg gccaagcgaa gcgcgagccg ggatccatgg
     1861 cccgcctgac agatggatcc cgggtcgagc ccgggataac gtcctgattt ctccatgcct
     1921 tgccaattcc agcgcgaacc gcaatcattg cttgctctgg cgcagggatt gggagactta
     1981 cgatggggta tttcgacggc ctggccgagg gaatgttctc gacggactcg gcaggacagc
     2041 ggatctttta ccccttcggc aagaaggtcg tcccgcgcct tcggcaaggt tactttgtgg
     2101 attttgttcg gacttggagt ttttttgacc tgttgttctg tatattccct acttgtcttc
     2161 acagaaagca tttttgaaaa aatcgcactg cttgccgccg tggcattctt tggtgtgtgc
     2221 actttgctcg cttggcggat ggcccgtcag gccggcgggc gcggccatcc gtcggcggat
     2281 gacgtgcggg gagaacacct ctaacgccgc tcgtccacca tctccagcca cgcctggcgt
     2341 tcgaagcggt cgcacatgtc cttgatctcc tcgatgggca ggaacacgcc gaagccggcc
     2401 aggtcgttct tgatcttcag cagcaggatg ccctcgctgt cgcggcgggc gaagtcctcg
     2461 tccagcagca ggcgcagata ggcctggctg gtttcgtcgg tcaggtcgca ggcccattcc
     2521 gccaacaggc ggttccgccg cgcccgcacc cagaagcgcg tctcgttctc gtgaacgaac
     2581 cgcgcctggg agacctgtcc cttgctggac atggcgtctt cgaaagccat tccccaatcc
     2641 tcgaccgcaa accgcgccgt tgctaacacg cccgcccgcc gctgtcgaat ggttagctga
     2701 cgaccacgac tggatagttt ctttccacag cgcaaacatg gatgcgaaag agagcatttc
     2761 caaaagtcgg cgcaacgcct cggattcgca agtcccctcc ccaggttatg ctgcactgca
     2821 cctacccgaa cggattggca cggcatttgc ggtattgcat gccagctaat caagaatgcc
     2881 ctggagaggt ggggagcgat gtacgacgac aacatcaaag ccgagaccga cgtggaagcc
     2941 cgtttcgggg tgtcgcgccg cgagttcatg acattctgcg ccggcctggc cgccaccatg
     3001 ggcctgccca agggcgccga cgcgcagatc gccgaggcga tcaccaagaa ggaccggccc
     3061 tcggtcatct ggctgcacca ccaggaatgc accggctgtt ccgagtcgct gctgcgctcc
     3121 gagcatccga cgctggagaa actgatcctc gacatcatct cgctggacta ccacgagacc
     3181 ctgttcgccg ccgccggcca ccaggccgag gccgcccggc tggcggccat ggagaagaac
     3241 aagggcaagt acatcctggt cgtcgagggc gccatcccca tgaaggacgg cggcatctac
     3301 tgcaagatcg gcggcaagac ctcgctggag ctgaccaagg aggtggccgc cggtgccgcc
     3361 gccatcatct cgatcggctc gtgcgcgtcg tggggcggca tgccctcgac cccgcccaac
     3421 ccgaccggcg ccgccggcgt gcgcgaggcc ctgggccgca ccgacatcgt caccatcccc
     3481 ggctgcccgc ccaacccgta caacttcctg tccaccgtcg tgcacttcct gaccttcggc
     3541 aagctgccgg cgctggacaa ggaaggccgc ccgctgttcg cctatggccg cctgatccac
     3601 gagaattgcg agcgccgcgc ccatttcgac gccggccgct tcgccatgga attcggcgac
     3661 gagggccaca agaagggcta ttgcctgtac aagctgggct gcaagggtcc cgagacctac
     3721 gccaactgcc cgtcgatcct gttcaacgac gtcggcaccg gctcgtggcc ggtgggcacc
     3781 ggccatccct gcatcggctg caccgaaaag ggcatcggtt tcgccaagcc catccacgcc
     3841 ctggccgaat tgcagaacca gcgcccgccc gcttcctatc cgcgcgcggt cgaggaacag
     3901 ggcaccggcg ccaccctcgc ctcgtcggcg ctgctggtgg gtgtcgcggc cgctgctgcc
     3961 ggcgccggct acaagctggt cggcaacctg ggccgcgacg aggacgaaga cgacacctcc
     4021 agccagggct aaggggccat gaccatgaag cgacgcgact ttttgcgcgc gacggccacg
     4081 ggcagtgcgg cggttgccgc ctgcgccacc ctggctccgt cgcccgccga ggcgcgcggc
     4141 aatctgccga tcccgcagaa cgccgtgggc ctgctgtacg attcgacgct gtgcatcggc
     4201 tgcaaggcct gcatgtccgc ctgcaaggag gccaaccagc ttccgctcga ggacaatgtg
     4261 ggcggcggcc tgtgggacac tccgctggac ctgtcgggca agacctacac ggtcatcaag
     4321 atgtaccagc acggcaccat ggagcataag gacaaggccg agaacggctt tgcccacatc
     4381 aagcgccagt gcctgcactg cgccgacccg tcctgcgtgt cggcctgccc ggtcacggcc
     4441 atgaccaaga acccggaaac cggcattgtc gagtacaaca aggacgcctg catcg
//
LOCUS       DATIKR010000589         2367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_8837, whole genome shotgun sequence.
ACCESSION   DATIKR010000589 DATIKR010000000
VERSION     DATIKR010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8837"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /gene="wecB"
                     /locus_tag="VLL76_09255"
     CDS             complement(<1..1061)
                     /gene="wecB"
                     /locus_tag="VLL76_09255"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012983903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HSV29737.1"
                     /translation="MASILCVVGARPNFMKIGPVIEALKAKGFEAPLLHTGQHYDEAM
                     NDQFFVDLGLPRPDVNLEVGSGTHATQTAEIMRRFEPVLDELKPNAVLVVGDVNSTIA
                     CALVAAKKGIKVIHVEAGLRSYDRDMPEEINRVLTDQISDFLFTTERSAQPNLAREGI
                     GADKVFFVGNVMIDTLLKNAARAIPAADTLKDHGLADGYTLVTLHRPSNVDEAEVLAR
                     LVGCLVEMAADTPVVFPIHPRTKARIEAAGLMDKLTAARVILLPPQGYLQMMGLMKSA
                     RVVVTDSGGLQEETTALGVPCLTVRENTERPITIAEGTNTLVGTDAGAIMAAFRDVLA
                     TGGKAGRIPEYWDGRAGER"
     gene            complement(1074..1694)
                     /locus_tag="VLL76_09260"
     CDS             complement(1074..1694)
                     /locus_tag="VLL76_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HSV29738.1"
                     /translation="MTFPDRPFDSIAEYFDAYADQLARAARSVPRDALDAAQALLADA
                     VAGDRCIYACGNGGSAAISNHLVCDHARGVSYDTGLRPRVHSLSATVEILTAIANDVA
                     YAEVFAEQLKLFARPGDVLITISSSGDSENVVRAVQWAKDNGVKTIAMTGFAGGRTAA
                     LADVNIHVAADNYGVVEDLHQSIMHALAQFIRMQRMPAGLVASRKF"
     gene            complement(1735..>2367)
                     /locus_tag="VLL76_09265"
     CDS             complement(1735..>2367)
                     /locus_tag="VLL76_09265"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSV29739.1"
                     /translation="PGLEQRAAELVAGLAPDLVVLTGDYQFRGEPAASETGRLLAPIL
                     AAARPRLGAVAVLGNHDGHAMVEVLEGLGVRVLVNERLTLELDGARLAITGVDDVHKF
                     HSPEAEAAIGDPGDGFRLALVHTPELAGLAAESGFDLYLCGHTHGGQICLPGGRAVFT
                     LVDRHPELAAGPWRLGRMAGYTSRGVGVGFPPLRFNCPGEVALLTLRRTP"
BASE COUNT          355 a          798 c          853 g          361 t
ORIGIN      
        1 atgcgctcgc cggcgcggcc gtcccaatat tccgggatgc ggccggcctt gccgccggtc
       61 gccagcacgt cgcggaaggc ggccatgatg gcgccggcat cggtgcccac cagggtgttg
      121 gtgccctcgg cgatggtgat cgggcgttcg gtgttctcgc gcacggtcag gcagggcacg
      181 cccagcgccg tggtctcttc ctgcagcccg cccgaatcgg tgaccaccac gcgggccgat
      241 ttcatcaggc ccatcatctg cagatagccc tgcggcggca acaggatgac gcgggcggcg
      301 gtcagcttgt ccatcagccc ggcggcctcg atgcgggcct tggtgcgcgg gtggatgggg
      361 aagaccaccg gggtgtcggc cgccatctcg accaggcagc cgaccagccg cgccagcacc
      421 tcggcctcgt ccacgttgga cgggcggtgc agggtgacca gggtgtagcc gtcggccagg
      481 ccgtggtcct tcagggtgtc ggccgccggg atggcgcggg cggcgttctt cagcagggtg
      541 tcgatcatca cgttgccgac gaagaacacc ttgtcggcgc cgatgccctc gcgcgccagg
      601 ttgggctggg cggaacgctc ggtggtgaac aggaagtccg agatctggtc ggtcagcacc
      661 cggttgatct cttccggcat gtcgcggtca tacgagcgca ggccggcctc gacgtggatg
      721 accttgatgc ccttcttggc ggcgaccagg gcgcaggcga tggtcgaatt gacgtcgccc
      781 accaccagca ccgcattggg cttcagctcg tccagcaccg gctcgaagcg gcgcatgatc
      841 tcggcggtct gggtggcgtg ggtgcccgag ccgacctcaa ggttcacgtc ggggcgcggc
      901 aggcccagat cgacgaagaa ctggtcgttc atggcctcgt cgtaatgctg gccggtatgc
      961 agcaacggcg cctcgaaccc cttggccttc agcgcctcga tcaccgggcc gatcttcatg
     1021 aagttcggcc gcgcgccgac cacgcacagg atgctcgcca tggggatgcc cttctagaac
     1081 ttgcgggacg cgaccagccc ggccggcatc cgctgcatgc ggatgaactg ggccaaggca
     1141 tgcatgatcg actggtgaag atcctcgacc acgccgtaat tgtcggccgc cacgtggatg
     1201 ttgacgtcgg ccagggcggc ggtgcggccg ccggcaaagc cggtcatggc gatggtcttg
     1261 acgccgttgt ccttggccca ttgcacggcg cggacgacgt tttccgaatc tcccgacgag
     1321 ctgatggtga tcagcacgtc gccggggcgg gcgaacagct tcagctgctc ggcgaacacc
     1381 tcggcatagg cgacgtcgtt ggcgatggcg gtcaggatct cgacggtggc cgacagcgag
     1441 tggacgcggg gcctgaggcc ggtgtcatag gacacgccgc gcgcatggtc gcacaccagg
     1501 tggttcgaga tcgcggccga gccgccgttg ccgcaggcat agatgcagcg gtcgccggcc
     1561 accgcgtcgg ccagcagcgc ctgggcggcg tcgagcgcgt cgcgcggcac cgaacgggcg
     1621 gcccgggcca gttggtcggc ataggcgtcg aagtattcgg cgatggaatc gaaggggcgg
     1681 tcgggaaatg tcatggaccg gattgttacc agattggtcc ggcgatccca agcgctatgg
     1741 tgtgcgccgc agcgtcagca gcgccacttc gcccgggcag ttgaacctga gcggcgggaa
     1801 gccgacgccc accccgcgcg aggtgtagcc ggccatgcgc cccagccgcc acggccccgc
     1861 cgccagctcg gggtggcggt ccaccagggt gaacaccgcg cggccgcccg gcaggcagat
     1921 ctggccgcca tgggtgtggc cgcacagata gaggtcgaag ccggactcgg ccgccaggcc
     1981 cgccagttcg ggcgtgtgca ccagcgccag gcggaagccg tcgccgggat cgccgatggc
     2041 ggcctcggcc tcgggcgaat ggaatttgtg gacgtcgtcc acgccggtga tggccagacg
     2101 cgcgccgtcc agctccagcg tcagccgctc gttgaccagc acgcgcacgc ccagcccttc
     2161 cagcacctcg accatggcgt ggccgtcatg gttgcccagc accgccacgg cgcccaggcg
     2221 cggccgcgcg gcggccagga tgggggcgag cagccggccg gtctcgcttg ccgccggctc
     2281 gccgcggaac tggtagtcgc cggtcagcac caccagatcg ggcgccaggc ccgccaccaa
     2341 ttcggcggcg cgctgctcaa gccccgg
//
LOCUS       DATIKR010000590         1686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_81894, whole genome shotgun sequence.
ACCESSION   DATIKR010000590 DATIKR010000000
VERSION     DATIKR010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81894"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VLL76_09270"
     CDS             <1..934
                     /locus_tag="VLL76_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV29740.1"
                     /translation="FGSIIVVNGDMTTGGLAACSLLAGRAMAPLQKALGVWTRFQTFI
                     LARERLEKLFAMPREAPPGMPKLPPARGALELRDVNFRYGEKMPWIIRDTSISIAEGE
                     CVAILGGNGGGKTTLLALMQGAIKPTSGNVLVDGADVAQFDPPSVRDQIAYLPQSGVL
                     FQGTILQNITMFRPEFDDIAVETAGLLGLDEVVATMAMGFDTPVGDGAYDSLPRGIKQ
                     RIAIARALISNPRIVLFDEANTAVDAAGDNFLRVWLERAKGKRTLVLVTHRPSLVKLA
                     DNVYDLEGGRLTRRVPEGEKVAPPQALLPQGGTA"
     gene            931..>1686
                     /locus_tag="VLL76_09275"
     CDS             931..>1686
                     /locus_tag="VLL76_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lantibiotic ABC transporter"
                     /protein_id="HSV29741.1"
                     /translation="MNAPVAQPAKASQQAIEHYEQQLQQNALGGFTAASDLAACLLPL
                     LKSLGWRGNPRHVAEALPHFANDLDLTGLRNVMAHLNFSSRPEKIVLAELDPRLTPCL
                     FLPDDGHALVVKAVADGKFEVFDSAQGATVTMDSPRMRGTVYFFSPIQADAQVQRVGW
                     FRTILDRFRPLFWQVFFVTLLLNIVSLGTPLFVMSIYDKVIGTGSMSMLASFSVGVCM
                     ALVFDGILRAVRARILAFIGARLDNIMGNNIFQH"
BASE COUNT          257 a          618 c          530 g          281 t
ORIGIN      
        1 ctttggcagc atcatcgtcg tcaacggcga catgaccacc ggcggcctgg cggcctgttc
       61 gctgctggcc ggccgcgcca tggcgccgct gcagaaggcc ctgggcgtgt ggacccgctt
      121 ccagaccttc atcctggcgc gcgagcggct ggagaagctg ttcgccatgc cgcgcgaggc
      181 cccgccgggc atgcccaagc tgccgcccgc ccgcggcgcg ctggaactgc gcgacgtcaa
      241 cttccgctat ggcgagaaga tgccgtggat catccgcgac acctcgatct ccatcgccga
      301 gggcgagtgc gtcgccattc tgggcggcaa cggcggcggc aagaccacgt tgctggcgtt
      361 gatgcagggc gccatcaagc cgacctcggg caatgtcctg gtggacggtg ccgacgtcgc
      421 ccagttcgat ccccccagcg tgcgcgacca gatcgcctat ctgccgcaat ctggcgtgct
      481 gttccagggc accatcctgc agaacatcac catgttccgc cccgaattcg acgacatcgc
      541 cgtcgagacc gccggcctgc tgggcctgga cgaagtggtg gcgaccatgg ccatgggctt
      601 cgacactccg gtgggcgacg gcgcctacga ctcgctgccg cgcggcatca agcagcgcat
      661 cgccatcgcc cgcgccctca tcagcaaccc caggatcgtg ctgttcgacg aggccaacac
      721 cgccgtcgac gccgccggcg acaacttcct gcgcgtatgg ctggagcgcg ccaagggcaa
      781 gcgcaccctg gtgctggtca cccatcgccc gtcgctggtc aagctggccg acaacgtcta
      841 cgacctcgaa ggcggccgcc tgacccgccg cgtgcccgag ggcgaaaagg tggcgccgcc
      901 ccaggccctg ctgccgcagg gagggacggc atgaacgctc ccgtcgccca gcccgccaag
      961 gcatcacagc aggccatcga gcattacgag cagcaactgc agcagaacgc cctgggcggc
     1021 ttcaccgccg cctcggacct ggccgcctgc ctgctgccgc tgctgaagtc gctgggctgg
     1081 cgcggcaacc ctcgccatgt ggccgaggcg ttgccgcatt tcgccaacga cctggacctg
     1141 accggcctgc gcaacgtcat ggcgcacctg aacttctcca gccggcccga gaagatcgtc
     1201 ctggccgagc tggatccgcg cctgacaccc tgcctgttcc tgcccgacga cggccatgcg
     1261 ctggtggtca aggcggtcgc cgacggcaag ttcgaggtgt tcgacagcgc ccagggcgcc
     1321 accgtcacca tggactcccc gcgcatgcgc ggcaccgtct atttcttttc gcccatccag
     1381 gccgacgccc aggtgcagcg tgtggggtgg ttccgcacca tcctcgaccg tttccgcccg
     1441 ctgttctggc aggtgttctt cgtcaccctg ctgctgaaca tcgtgtcgct gggcacgccg
     1501 ctgttcgtga tgtccatcta cgacaaggtg atcggcaccg gctcgatgtc catgctggcg
     1561 tcgttctcgg tgggcgtctg catggccctt gtgttcgacg gcatcctgcg ggcggtgcgc
     1621 gcccgcatcc tggcgttcat cggcgcccgc ctcgacaaca tcatgggcaa caacatcttc
     1681 cagcac
//
LOCUS       DATIKR010000591         1703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_45655, whole genome shotgun sequence.
ACCESSION   DATIKR010000591 DATIKR010000000
VERSION     DATIKR010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45655"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VLL76_09280"
     CDS             complement(<1..395)
                     /locus_tag="VLL76_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV29742.1"
                     /translation="MKILIADDHELFRDGLRHVLDQLGGSLTVVEASDFQQAVDTVER
                     ERDIDIVLLDLTMPGMPWNEGLPRLKELLPDNVPIIVLSASDDRRHVLQAVNMGAAGF
                     IPKTSSSRVMLSALKLVLSGGVYLPPALL"
     gene            846..1058
                     /locus_tag="VLL76_09285"
     CDS             846..1058
                     /locus_tag="VLL76_09285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29743.1"
                     /translation="MAKREVVTGQRYQPTDSSAVWEVREVVKDAEGISHARLTRVGDP
                     TAMKTISVAALRDNRLFRLLPDQPPA"
     gene            1175..>1703
                     /locus_tag="VLL76_09290"
     CDS             1175..>1703
                     /locus_tag="VLL76_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29744.1"
                     /translation="MARRRPRRGQQSWSIWFKLFKFVLFLGALGATGFYAYEVGQRLA
                     LEQVAGLRQEIERLTGAEAGHRDEVARLQSDLEATRKRADEFEAKYAAVAPSEETKEI
                     LAAVKAKLDSGLDAKRLAFVIQAAERPRRCGAEDNKRFMVKTARYDGNSTWVRFADLV
                     TVTAEGQGGNGGAEEW"
BASE COUNT          342 a          568 c          530 g          263 t
ORIGIN      
        1 tccaacagcg ccggcggcag gtagacgccg cccgacagca cgagcttgag cgccgacagc
       61 atcacgcggc tggacgaggt cttggggatg aagccggcgg cgcccatgtt gaccgcctgc
      121 agcacgtggc ggcgatcatc cgaagccgac agcacgatga tcggcacgtt gtcgggcaac
      181 agctccttga ggcgcggcag gccctcgttc cacggcatgc ccggcatggt caggtccagc
      241 agcacgatgt cgatgtcgcg ctcgcgctcg acggtgtcga ccgcctgctg gaagtcgctg
      301 gcctccacga ccgtgagcga tccgcccaac tggtcgagga cgtgccgcag gccgtcgcgg
      361 aaaagctcgt ggtcatcggc gatcaaaatc ttcatgttcc ccaccttgca attgtgcgga
      421 cagccccacg ggagaaaggg cggatcaatt tgcctaacgc gcccggcggg ccgagcacct
      481 gttgcgatgc atatgaaccc aaaagagcgc ttccgtcgct acgaaaaagg tttgtgggcc
      541 ttccgtaaga agcaacgcac caccttcttc gcacttgcaa aaatatccga tgacccttgg
      601 aatgcaatat gaaacccggt gattgaccag ccgacataca atgggcatag atactcaata
      661 catacgccca taaccttggt caaagacatt atccaaaagt cggtgatttc caatatcgtt
      721 ctatttgatt taaaaatgca ggagagcggc agggaccgtg gggccaccac ggaatttcgc
      781 tttccatgag gcgcgccatc gcctaaacag cgccctcccc cgaacgtgca caacagaggc
      841 gaagcatggc caagcgagag gtcgtcaccg gacaacgtta tcaaccgacc gattccagtg
      901 cggtatggga agtgcgcgag gtcgtcaagg acgccgaagg catctcgcac gcccgcctga
      961 cccgcgtcgg cgaccccacc gccatgaaga ccatttcggt cgccgccctg cgcgacaacc
     1021 gcctgttccg cctgctgccc gaccagccgc cggcctgata ccgggacccg agggcccgcc
     1081 cgggtgtgac actttcgggg tagtgcgccc gggcgcccca ttgccgccac aaaccggcct
     1141 tagggcaagg ggcgtcgtcg caagtggagg tgacatggcc cgccgcagac cccgccgcgg
     1201 ccagcaaagc tggtcgatct ggttcaagct tttcaaattc gtcctgttcc tgggcgccct
     1261 gggcgcgacc ggcttctacg cctacgaggt cggccaaagg ctggcgctcg agcaggtcgc
     1321 cggcctgcgc caggagatcg agcgcctgac cggcgccgag gccggccacc gcgacgaggt
     1381 cgcccgcctg cagtcggacc tggaggccac ccgcaagcgc gccgacgagt tcgaggcgaa
     1441 atacgccgcc gtggcgccca gcgaggagac caaggagatc ctggccgccg tcaaggccaa
     1501 gctggattcc ggcctggacg ccaagcgcct ggccttcgtc atccaggccg ccgagcgccc
     1561 gcgccgctgc ggcgccgagg acaacaagcg cttcatggtc aagaccgccc gctacgacgg
     1621 caattcgacc tgggtgcgct tcgccgacct ggtcaccgtc acggccgagg gccagggcgg
     1681 caatggcggc gccgaggaat ggt
//
LOCUS       DATIKR010000592         2185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_202238, whole genome shotgun sequence.
ACCESSION   DATIKR010000592 DATIKR010000000
VERSION     DATIKR010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202238"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..798)
                     /locus_tag="VLL76_09295"
     CDS             complement(64..798)
                     /locus_tag="VLL76_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSV29745.1"
                     /translation="MTALRSVLFVVLFYAWTLPLAVLYLPLLLAPRPVMMTFAKAWLR
                     GVLGLLRAVCGLTFEVRGTEHLPKGAAIVAAKHQSAFETFAFHLLLDDPAYVLKRELT
                     WIPFFGWYLAKTGVIAIDRSAGTKALKAMVKGGEDAKADNRPIIIFPEGTRTPPGERQ
                     PYHTGVAMLYGALDLPVVPVALNSGLFWRKRGFAKRAGIITLEFLPPMAPGMNRKAFM
                     AELESRVEAATDALVAEARGRFPALD"
     gene            complement(893..1552)
                     /locus_tag="VLL76_09300"
     CDS             complement(893..1552)
                     /locus_tag="VLL76_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSV29746.1"
                     /translation="MTDTPGRRSLSAVFKVLGFGAGAAGGLFALWCAGFLWFVATVPD
                     QVGDPATVTDAIVVLTGGSERLATGVQLLEDGRARKLFVSGVHKDVELADILKLGHAD
                     HGGLACCVVLGYSAPDTVGNAAETARWMAKERFRSLRLVTGAYHMPRSLLEFRRAMPD
                     AAIVPHPVFPDAVKSREWWRWPGTAALLATEYSKYLAAVVRHWFLPSGPPQTLGSQAS
                     G"
     gene            complement(1549..>2185)
                     /locus_tag="VLL76_09305"
     CDS             complement(1549..>2185)
                     /locus_tag="VLL76_09305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSV29747.1"
                     /translation="PGITAARALDKHQTLALLEPWLGSADVVRDLPLPRLVDVTVDAE
                     ARIDLGALSDRLGKAVPGATLDDHRVWLSRLIGLSRTVEWMALGIVVLIGSVTAGTVV
                     YATRTGMAVHHGVIEVLHLIGAHDDYIARQFADRAFTLGFAGGMLGLAMAVPALTAIG
                     WAAKRLEGGFVPSLSLPLFGYVAIGLLPLAAALLAMLTARLTVHGTLARMP"
BASE COUNT          371 a          728 c          799 g          287 t
ORIGIN      
        1 gtggggagtc gcgacgattc gcgaatgcac agacttgtcc acaggggtgg tatgacctgg
       61 gggtcagtcg agggcgggga aacggccgcg cgcctcggcc accagggcgt cggtggcggc
      121 ctcgacgcgg ctctccagct cggccatgaa ggccttgcgg ttcatgcccg gcgccatggg
      181 cggcaggaat tccagcgtga tgatgccggc ccgcttggcg aagccgcgct tgcgccagaa
      241 caggccggaa ttcagcgcca ccggcaccac cggcaggtcg agcgcgccgt acagcatggc
      301 gacaccggtg tgatagggct ggcgctcgcc cggcggggtg cgggtgccct cggggaagat
      361 gatgatgggg cggttgtccg ccttggcgtc ctcgccgccc ttgaccatgg ccttcagcgc
      421 cttggtgccg gccgagcggt cgatggcgat gacgccggtc ttggccaggt accagccgaa
      481 gaacggaatc caggtcagct cgcgcttcag cacataggcc gggtcgtcca gcagcaggtg
      541 gaaggcgaag gtctcgaacg ccgactggtg cttggcggcg acgatggcgg cgcccttggg
      601 cagatgctcg gtgccgcgca cctcgaaggt caggccgcac accgcccgca gcaatcccag
      661 cacgccgcgc agccaggcct tggcgaaggt catcatcacc ggccgcggcg ccagcagcag
      721 cggcagatag agcacggcca ggggtagcgt ccaggcatag aacaagacga cgaacaggac
      781 ggagcgcaga gcagtcaacg atcgaaaccc ttcccagtgg tgagaatctg acggaggtgt
      841 agggcaccat ccgtcagatt ctcaccacaa ttcgatatgt tggtgggcct ccttatccag
      901 acgcttggga cccaagcgtc tggggaggac cactaggcag gaaccagtgg cggaccaccg
      961 ctgccagata cttcgaatac tcggtggcaa gcaaggccgc cgtgccgggc cagcgccacc
     1021 attcgcggct tttcaccgcg tcggggaaca ccggatgggg cacgatggcc gcatcgggca
     1081 tggcgcgccg gaactccagc agcgagcgcg gcatgtggta ggcgccggtc accagccgca
     1141 gcgagcggaa gcgctccttg gccatccagc gcgccgtctc ggcggcgttg cccacggtgt
     1201 cgggggcgga atagccgagc accacgcagc atgccagtcc gccgtggtcg gcgtggccga
     1261 gcttcaggat gtcggccagc tcgacgtcct tgtgcacgcc cgacacgaac agcttgcggg
     1321 cgcggccgtc ctctagcaat tgcacgccgg tcgccaggcg ctcgctgccg ccggtcagca
     1381 ccacgatggc gtcggtgacg gtggcgggat cgccgacctg gtcgggcacg gtcgcgacga
     1441 accacaggaa gccggcgcac cacagcgcga acaggccgcc ggcggcgccg gccccgaagc
     1501 cgagcacctt gaacacggcg gacagcgagc ggcggccggg tgtatcggtc atggcatgcg
     1561 ggcgagtgtg ccgtggacgg tcaggcgcgc ggtcagcatg gccagcagcg ccgccgccag
     1621 cggcagcagg ccgatggcga cgtaaccgaa cagcggcagg ctgaggctgg gcacgaagcc
     1681 gccctccagg cgcttggcgg cccagccgat ggcggtcagc gccggcaccg ccatggcgag
     1741 gcccagcatg ccgccggcga agcccagggt gaaggcgcgg tcggcgaatt gccgggcgat
     1801 gtagtcgtcg tgggcgccga tcaggtgcag cacctcgatg acgccgtgat gcaccgccat
     1861 gccggtgcgg gtggcgtaga ccacggtgcc ggcggtgacc gagccgatca gcaccacgat
     1921 gccgagcgcc atccattcca ccgtgcgcga cagcccgatc aggcgcgaca gccagacccg
     1981 gtggtcgtcc agggtggcgc ccggcaccgc cttgcccagc cggtcggaca gcgcacccag
     2041 gtcgatgcgg gcctcggcat ccaccgtgac gtccaccagg cgcggcagcg gcaggtcgcg
     2101 caccacgtcg gcgctgccca gccacggctc cagcagtgcc agggtctggt gcttgtccag
     2161 ggcgcgggcg gcggtgatgc caggg
//
LOCUS       DATIKR010000593         1897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_178559, whole genome shotgun sequence.
ACCESSION   DATIKR010000593 DATIKR010000000
VERSION     DATIKR010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178559"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1432)
                     /locus_tag="VLL76_09310"
     CDS             complement(<1..1432)
                     /locus_tag="VLL76_09310"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV29748.1"
                     /translation="MMVWAVGLLVWESIQERRAIEQGMQSTVRALMDTIDQDFRLSIE
                     TLETISLSRLLAEGDYEGFHKRARQLVVRHPQWVNLTVIGHSGQMLVNSLLPYGQPLP
                     WLTDPGYEVPRQALLKVLETDKPAVSDVFLGPISGRHMVALAVPVSGFDGQTTHVLMA
                     GIAADQLAEGLKRFHASPDWVVGLLDGDQTMVARTIDHDRLVGKPALAWFQERSRGTS
                     EGVITGQAMHGPKFTFAYQKSELTGWTLVFGAPHDIFFASLGRTAALTGGVGLATLAL
                     SLALALWVASRILRPVQALNQVAAPFIDPAKPPSRLYPVRELDDLHRALDGLSEALAT
                     SESRFRRLFATAPVMLDVTDAEGRLVEVNDTWLRTLGYSRDHVLGHRPAEFQTPQSRA
                     YMEAVVLPELMRRGGIDDVALQFVTRWGDVRDVMLSSRVERLPDGGLRSIAALRDVTD
                     QRRIERALANAIEEAERANDAKSRFLA"
     gene            complement(1586..>1897)
                     /locus_tag="VLL76_09315"
     CDS             complement(1586..>1897)
                     /locus_tag="VLL76_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSV29749.1"
                     /translation="YMLTGERFDAREALRLGLVHGVVADDKLAAARDHLVEACLKGAP
                     KAQDSAKDLLRLVAETPMGPDLMRLSAIRLAEDLAGADGREGLAAAMSKRKPVWGAEP
                     Q"
BASE COUNT          316 a          659 c          634 g          288 t
ORIGIN      
        1 cggccaggaa gcggcttttg gcgtcgttgg cgcgctcggc ctcctcaatg gcgttggcga
       61 gcgcgcgttc gatgcggcgc tggtcggtga cgtccctcag cgcggcgatg ctgcgcagcc
      121 cgccatcggg caggcgctcg acccgcgacg acagcatcac gtcgcgcacg tcgccccagc
      181 gggtgacgaa ttgcagcgcg acgtcgtcga tgccgcccct gcgcatcaac tccggcagca
      241 ccaccgcctc catgtaggcg cgcgattgcg gcgtctggaa ctccgccggc cgatgcccca
      301 gcacgtggtc gcggctgtag cccagggtgc gcagccaggt gtcgttcacc tcgaccaggc
      361 ggccctcggc atccgtgacg tccagcatca ccggcgcggt ggcgaacaag cggcggaacc
      421 ggctttcgct ggtcgcgagg gcttccgaca ggccatcgag ggcacggtgg aggtcgtcga
      481 gttcacgcac cggatacagc cggctcggcg gcttggcggg atcgatgaaa ggagccgcca
      541 cttggttcaa cgcctggacc ggccgcagga tgcgcgacgc cacccacagc gccaacgcca
      601 gcgacaatgc cagcgtcgcc aggccgacac cgccggtcag cgccgccgtg cggcccagcg
      661 aggcgaagaa gatgtcgtgc ggcgcgccga acaccagcgt ccagcccgtc agctccgatt
      721 tctggtaggc gaaagtgaat ttaggaccgt gcatggcctg gccggtgatc acaccctcgg
      781 acgtgccgcg cgaacgttcc tggaaccaag ccaaggcggg tttgccgacc agcctgtcgt
      841 ggtcgatggt ccgcgccacc atggtctggt cgccgtccag caatccgacc acccaatcgg
      901 gcgacgcatg gaagcgcttc agcccctcgg ccagttggtc ggccgcgatc ccggccatca
      961 ggacatgggt ggtctggccg tcgaagccgc tgaccggcac cgccagcgcc accatgtggc
     1021 ggcccgagat cggcccgagg aacacatccg acaccgcagg cttgtcggtt tccaacacct
     1081 tgaggagggc ttggcgcggc acctcgtatc ccggatcggt caaccagggc agcggttgac
     1141 catacggcaa cagcgagttc accagcatct ggccggaatg gccgatcacg gtcaagttga
     1201 cccattgcgg gtggcggacg accagttggc gggcgcgctt gtggaagcct tcgtaatcgc
     1261 cctcggccag caaccgcgac aggctgatgg tttccaatgt ttcgatggac agccggaagt
     1321 cctgatcgat cgtatccatc aacgcacgca ccgtcgattg catgccctgt tcgatggcgc
     1381 gccgttcctg gatggactcc cacaccagga ggcccacggc ccagaccatc attggcgtca
     1441 gtgcgaccag gacgaggctg atcaggtgac tgcgaagccc gccccggaag cgcggtacgt
     1501 ggaagcccga aatgccgatt gctccgatcc agcgtgggta ttccccagat ggggacgccc
     1561 aagcccgggc gagtcggcga ttcccttatt gcggctcggc accccagacg ggcttgcgct
     1621 tggacatggc ggcggccagc ccctcgcggc catcggcgcc ggccaggtcc tcggccaggc
     1681 ggatggcgga cagccgcatc aggtccggcc ccatcggcgt ctcggccacc agccgcagca
     1741 ggtccttggc cgagtcctgg gccttggggg cgcccttcag gcaggcctcg accagatggt
     1801 cgcgggcggc ggcgagcttg tcgtcggcca ccacgccgtg gaccagcccc agccgcaacg
     1861 cctcgcgagc atcgaagcgc tcgccggtca gcatgta
//
LOCUS       DATIKR010000594         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_105669, whole genome shotgun sequence.
ACCESSION   DATIKR010000594 DATIKR010000000
VERSION     DATIKR010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105669"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1226
                     /locus_tag="VLL76_09320"
     CDS             <1..1226
                     /locus_tag="VLL76_09320"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSV29750.1"
                     /translation="MKHKLQMEPEKVLEKVKESVAFARSLTDDVEWSAEDGSRTEHDF
                     LCRCVEAAIAAGARTINIPDTVGYAVPDEYAALIAMLVNRVPNIDKAILSVHCHNDLG
                     LAVANSLAAVAAGARQIECTVNGLGERAGNAAMEEIVMGLRTRPDRLPFATGIKTELI
                     TRASRLVSAVTGFVVQPNKAIVGKNAFAHESGIHQDGVLKCAQTYEIMTPESVGLNRS
                     SLVMGKHSGRAAFKDKLKQLGYELGDNAIEDAFLRFKDLADRKKDIFDEDIVALVDDE
                     VLRENDRIRLRGLEVLCGTRHNPPKAELELEIDGEVKTVKATGDGPVDATFNAIKALF
                     PHEARLQLYQVHAVTQGTDAQAEVTVRLEESGKTVNGQSADTDTMVASARAYVNALNK
                     LLVKRQKTAPEALSA"
     gene            1317..>2212
                     /locus_tag="VLL76_09325"
     CDS             1317..>2212
                     /locus_tag="VLL76_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HSV29751.1"
                     /translation="MFSKLTGWMSADMAIDLGTANTLVYVKGRGIVLNEPSVVAIAEE
                     KGKKKVLAVGDEAKMMLGRTPGYISAIRPLRDGVIADFEVAEEMIKHFIRKVHNRRSF
                     ASPLVIVCVPSGSTAVERRAIQESAESAGARRVFLIEEPMAAAIGAGLPVTEPTGSMV
                     VDIGGGTTEVAVLSLGGIVYSRSVRVGGDKMDEAIIAYIRRNHNLLIGEGSAERIKKE
                     IGSACPPEDGEGRTMEIKGRDLMNGVPKELIVSERQIAESLAEPVGAIIEAVKVALEH
                     TAPELAADIVDKGIVLTGGGALL"
BASE COUNT          435 a          723 c          711 g          343 t
ORIGIN      
        1 acatgaagca caagcttcag atggagcccg aaaaggtgct ggagaaggtc aaggaatcgg
       61 tggccttcgc ccgctcgctg accgacgacg tggaatggtc ggccgaggac ggctcgcgca
      121 ccgagcacga cttcctgtgc cgctgtgtcg aggccgccat cgccgccggc gcgcgcacca
      181 tcaacatccc cgacaccgtc ggctatgcgg tgcccgacga atacgcggcg ctgatcgcca
      241 tgctggtcaa ccgcgtgccc aacatcgaca aggccatcct gtcggtccat tgccacaacg
      301 acctgggcct ggccgtcgcc aactcgctgg ccgccgtcgc cgccggcgcc cgccagatcg
      361 agtgcaccgt caacggcctg ggcgagcgcg ccggcaacgc cgccatggaa gagatcgtga
      421 tgggcctgcg cacccgtccc gaccgcctgc ccttcgccac cggcatcaag accgagctga
      481 tcacccgcgc ctcgcgcctg gtgtcggccg tcaccggctt cgtggtgcag cccaacaagg
      541 ccatcgtcgg caagaacgcc ttcgcccacg aatcggggat ccaccaggac ggcgtgctga
      601 aatgcgccca gacctacgag atcatgaccc ccgaatcggt gggcctgaac cgttccagcc
      661 tggtcatggg caagcattcc ggccgcgccg ccttcaagga caagctgaag cagcttggct
      721 atgagctggg cgacaacgcc atcgaagacg ccttcctgcg gttcaaggac ctggccgacc
      781 gcaaaaagga catattcgac gaagatatcg tggccctcgt cgacgacgag gtgctgcgtg
      841 aaaacgaccg catcaggctc cgtgggctcg aggtgttgtg cggcaccagg cacaatccgc
      901 cgaaggccga gctggagctg gaaatcgacg gcgaagtgaa gactgtcaag gcaacgggcg
      961 acggaccggt ggacgccacc ttcaatgcca tcaaggcact gtttcctcac gaagcgcggc
     1021 tgcagcttta ccaggtgcac gccgtgaccc agggcacaga tgcccaggcc gaagtaacgg
     1081 ttcgtttgga agaatctggc aagactgtca acgggcagag cgccgacacc gacaccatgg
     1141 tcgcttccgc ccgcgcgtat gtgaatgcct tgaacaaact tttggtgaag cggcaaaaaa
     1201 ccgctccgga ggcgctctcg gcctgatata aggccagcgc ccctgcaatg ggaaccggac
     1261 ccgggccact ggcggacggg tcgcacagtt caacgctgga tgttgagtga gggattatgt
     1321 tttcgaagct gacggggtgg atgtccgcgg acatggcgat cgacctgggg accgccaata
     1381 cgctggtcta tgtgaagggc cgcggtatcg tcctgaacga gccgtcagtg gtggcgatcg
     1441 ccgaggaaaa gggcaagaag aaggtcctgg ccgtcggtga cgaagccaag atgatgctgg
     1501 gccgcacgcc gggctacatc tcggccatcc gcccgctgcg cgacggcgtc atcgccgact
     1561 tcgaagtcgc ggaagagatg atcaagcact tcatccgcaa ggtccacaac cgccgttcct
     1621 tcgccagccc gctggtgatc gtgtgcgtgc cctccggctc caccgccgtc gagcgccgcg
     1681 ccatccagga atcggccgaa agtgccggcg cccgccgcgt gttcctgatc gaagagccta
     1741 tggccgccgc catcggcgcc ggccttccgg tcaccgaacc caccggcagc atggtggtgg
     1801 atatcggtgg cggtacgacc gaggttgccg tgctttcgct aggcggcatc gtctattctc
     1861 gctctgtccg cgtcggcggc gacaagatgg acgaagccat catcgcctat atccgccgca
     1921 accataacct gctgatcggc gaaggctcgg ccgagcggat caagaaggaa atcggttcgg
     1981 cctgcccgcc cgaggacggc gagggccgca ccatggagat caagggccgc gacctgatga
     2041 acggcgtgcc gaaggagctg atcgtttccg agcgccagat cgccgagagc ctggccgagc
     2101 cggtcggcgc catcatcgag gcggtcaagg tggcgctgga gcacaccgct ccggaactgg
     2161 ccgccgacat cgtcgacaag ggcatcgtgc tgaccggcgg cggcgcgctg ct
//
LOCUS       DATIKR010000595         2381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_129617, whole genome shotgun sequence.
ACCESSION   DATIKR010000595 DATIKR010000000
VERSION     DATIKR010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129617"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VLL76_09330"
     CDS             <1..598
                     /locus_tag="VLL76_09330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29752.1"
                     /translation="HHRNLVPLEMLAPLVIVAAMGALPLPRAARRGLATAVVAFVTAS
                     GTPAIGPRAPWGSVALVPPVENGTMVLLTGSEPVSFLIPAFPADTRFVRVEPQFGERF
                     AKLSADLLAAHPGPVLALFGAVEHQAASAAVAVHGLALGDCRTVSSPLAANAFSLCAA
                     ARPRPAAPVEEPGPPPAAEASPSAAGTSDGSAGSPAPR"
     gene            complement(489..1433)
                     /locus_tag="VLL76_09335"
     CDS             complement(489..1433)
                     /locus_tag="VLL76_09335"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV29753.1"
                     /translation="MTNPILTIGMPVHNGEAYLAAALDSVLAQTMGDIEVVISDNAST
                     DATRAIGESYARRDPRVRYTRTDANIGAGPNFNRVFGLCRTPFFKWMAHDDLLDPAWA
                     ERCLKVLAEDAGVVLAHTAITLVDETGRPLPVRQDGKVIDRAGRRHHDREPPHLAEGA
                     WAPDRFAEVLRRMNWCTAVFGMMRSDALRRTHLHGSYYEADRVLLAEMALLGRFCQLD
                     APLFIKRCHGGVSVLKTFREQARMIDPAVHPWPRGIRLRLGYLKTLGVGDLGVVERAA
                     CAVTVARVTLRNRLTYRLRTGMPRRRAGDPVPQRERPV"
     gene            1609..2127
                     /locus_tag="VLL76_09340"
     CDS             1609..2127
                     /locus_tag="VLL76_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HSV29754.1"
                     /translation="MFTRLRYPAWSPYVAGMIIGALQIPAFLLMNTALGASSSYVTVG
                     GWLASLADPAVAQIPYVAKHLEGAKNWWQVALVVGIALGAWLSARLAGTTRKGFSPAW
                     TQATGITSTRRRAAMGFAGGFLMLLGARIADGCTSGHGISGIAQLSVGSFIAVTAMFI
                     GAILVAMLMRRV"
     gene            2141..>2381
                     /locus_tag="VLL76_09345"
     CDS             2141..>2381
                     /locus_tag="VLL76_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29755.1"
                     /translation="MTVFPAILLGLAMGVVFGFTLEKSRVFEPGMILGQMQMRSFTML
                     KVFLSAVVTGLVILAVLSSLGLAKMHPKATLMAADV"
BASE COUNT          328 a          851 c          803 g          399 t
ORIGIN      
        1 gcatcatcgc aacctggtgc cgctggagat gctggcgccg ctggtgatcg tcgccgccat
       61 gggcgccctg cccttgccgc gcgccgcccg gcgcggcctc gccaccgccg tggtggcctt
      121 cgtcaccgcc tccggcacgc cggccatcgg cccgcgcgca ccttggggca gcgtcgcctt
      181 ggtgccgccc gtcgagaacg gcaccatggt gctgctgacg gggtccgagc cggtgtcgtt
      241 cctaatcccc gccttccccg ccgacacccg cttcgtgcgc gtggaaccgc aattcggcga
      301 gcgcttcgcc aagctgtcgg ccgatttgct ggccgcccat cccggccctg tgctggccct
      361 gttcggcgcc gtcgagcacc aggcggcaag cgcggcggtg gcggtccatg gcctcgcgct
      421 cggggactgc cgcaccgtct cgtcgccgct ggcggcgaac gcgttctcgc tgtgcgccgc
      481 cgcgcggcct agaccggccg ctcccgttga ggaaccgggt cccccgcccg ccgccgaggc
      541 atccccgtcc gcagccggta cgtcagacgg ttccgcaggg tcacccgcgc cacggtgacg
      601 gcgcacgccg cccgctccac cacgcccagg tcaccgacgc ccagcgtctt caaatagccg
      661 agccgcagcc ggattccgcg cggccatgga tgcaccgccg ggtcgatcat gcgcgcctgc
      721 tcgcggaagg tcttgagcac gctgacgccg ccatggcacc gcttgatgaa cagcggcgcg
      781 tccaattggc agaaccgccc cagcaacgcc atctcggcca gcagcacgcg gtcggcctcg
      841 taatagctgc cgtgcaggtg ggtgcgccgt aacgcgtcgg accgcatcat gccgaagacg
      901 gcggtgcacc aattcatccg ccgcagcacc tcggcgaagc ggtcgggcgc ccacgcgccc
      961 tcggccaggt ggggcggctc gcggtcgtgg tggcggcggc cggcgcggtc gatcaccttt
     1021 ccgtcctggc gcaccggcaa cggccgcccc gtctcgtcaa ccagggtgat ggcggtatgg
     1081 gccagcacca ccccggcatc ctcggccagc accttgaggc agcgctcggc ccaggcgggg
     1141 tcgagcaggt cgtcatgggc catccacttg aagaatggcg tgcggcacag gccgaaaacg
     1201 cggttgaagt tcggcccggc accgatgttg gcgtcggtgc gggtgtagcg caccctgggg
     1261 tcgcggcggg cataggactc gccgatggcg cgggtggcgt cggtcgaggc gttgtccgag
     1321 atcaccacct cgatgtcacc catggtctgc gccagcacgc tgtcgagggc ggcggccaga
     1381 taggcttcgc cgttatggac cggcatgccg atggtgagga tggggttggt catggcggct
     1441 ctcacctgcg ggaggacaca gccaatgtgg cgccccggcg cgacgacggg cagaacccct
     1501 ggtgggtaag cgggggcgca aagggggagc caaccccacc cggttcggcg gttgcctata
     1561 attagaaact tgtcatattc atgaaggatt acattcggag aacccgccat gttcacccgc
     1621 ctgcgctatc ccgcatggtc gccctatgtg gccggcatga tcatcggcgc cctgcaaatc
     1681 cccgccttcc tgctgatgaa cacggctttg ggcgcttcgt cgtcctatgt caccgtgggc
     1741 ggctggctgg cgtcgctggc cgatccggca gtggcccaga tcccctatgt cgccaagcat
     1801 ctggagggcg ccaagaactg gtggcaggtg gcgttggtgg tcggcatcgc gctgggggcg
     1861 tggctgtcgg cgcgcctggc gggcaccacc cgcaagggct tctcgcccgc ctggacccag
     1921 gcgaccggca tcacctcgac ccgccgccgc gccgccatgg gcttcgccgg cggctttctg
     1981 atgctgctgg gcgcccgcat cgccgacggc tgcacctcgg gtcacgggat ttcgggcatc
     2041 gcccaattgt cggtgggatc gttcatcgcg gtcaccgcca tgttcatcgg cgccatcctg
     2101 gtcgccatgc tgatgcgccg agtctagcga gggccgcccc atgaccgtct ttcccgccat
     2161 ccttttgggc ctcgccatgg gcgtggtgtt cggcttcacc ctggaaaaaa gccgcgtgtt
     2221 cgaacccggc atgatcctgg gccagatgca gatgcgcagc ttcaccatgc tgaaggtctt
     2281 cctcagcgcc gtcgtcaccg gcctggtcat cctggcggtg ctgtcgtcgc tgggactggc
     2341 caagatgcac cccaaggcca ccctgatggc cgccgacgtt a
//
LOCUS       DATIKR010000596         3928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_105689, whole genome shotgun sequence.
ACCESSION   DATIKR010000596 DATIKR010000000
VERSION     DATIKR010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3928
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105689"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..2151
                     /gene="tkt"
                     /locus_tag="VLL76_09350"
     CDS             157..2151
                     /gene="tkt"
                     /locus_tag="VLL76_09350"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HSV29756.1"
                     /translation="MTAQAPAATIAEMANAIRFLSMDAIEKAKSGHPGMPMGMADVAA
                     VLYTRFLKFDAKAPRWADRDRFILSAGHGSMLLYSLAYLTGYEDIDLDQVKNFRQLGA
                     RTAGHPEFGHVAIADTTTGPLGQGITNAVGFALAEAMQAARYGKDVVDHYTYVIAGDG
                     CLMEGISQEAITMAGHWRLNKLIVLWDDNHICIDGDTSLSTSDDQAKRFQAAGWNTLA
                     CDGHDPDAITKAIEAARKSDKPTMIACRTVIGKGAPNKCGSEKVHGAPLGAEEIAAAR
                     AAVNWPAEPFAVPDHVLAAWRAAGTRGAAERTAWEGRFAKLDAAKKAEFTRTNEGRLP
                     DGWQKAIIDFKKKMSAEQPKLATRKASQEVLEVVTAAIPEMIGGSADLTHSNLTDTKA
                     CKPSIKPGEFGGRYIHYGIREHGMAAVMNGLSLHGGFIPYGGTFMIFANYLWPALRMS
                     AMMDQRVLYVLTHDSIGLGEDGPTHQPIETLAALRATPNVLVFRPCDPIETAEAYECA
                     LLNDKGPSCFALSRQNLPTLRTEHTDENKTAKGAYVMSEAKGKRQVTIIATGSEVSLA
                     LDAQKLLQEKGVGAAVVSMPCWELFDRQPKEYRAAVLGEGSVRVAVEALGTFGWERYV
                     GTEGAVIGMPGFGASAPAEKLYEHFGITARAVADAALARL"
     gene            2357..3421
                     /gene="fba"
                     /locus_tag="VLL76_09355"
     CDS             2357..3421
                     /gene="fba"
                     /locus_tag="VLL76_09355"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017938607.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HSV29757.1"
                     /translation="MALVSMRQLLDHAAENGYGLPAFNVNNMEQVKAIMEAAQATNSP
                     VILQGSAGARKYAGEPFLRHLILAAIEAYPDIPVCMHQDHGTSPAVCARAIQSGFSSV
                     MMDGSLKEDGKTPSDWDYNVNTTLAVVKIAHACGVSVEGELGCLGSLETGQAGEEDGV
                     GAEGTLDHSQLLTDPNEAAEFVKLTQVDALAIAIGTSHGAYKFTKKPTGAVLRIDRIK
                     EIHARIPTTHLVMHGSSSVPQDWLEIINNYGGDMGQTYGVPVEEIVEGIKHGVRKVNI
                     DTDLRMASTGSIRKYLAENKKDFDPRKYYKVAQDAMVGICKARYEAFGAAGQAAKIKA
                     RSLETMFDMYAKGSLDQKIV"
     gene            3590..>3928
                     /locus_tag="VLL76_09360"
     CDS             3590..>3928
                     /locus_tag="VLL76_09360"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008612999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HSV29758.1"
                     /translation="MSVKIAPSILSADFARLGEEVKAIDEAGCDWVHIDVMDGHFVPN
                     LTFGPPIIKAIRPWTKKVFDVHLMIDPAQPYLEDYAKAGADYITIHAEADKHIDRSLQ
                     FIKSLGKKAGI"
BASE COUNT          742 a         1421 c         1212 g          553 t
ORIGIN      
        1 ggcccatcat ctccgcgcca agctaggaca gttcgtggac gaccaaaacc agccggccga
       61 aagccatccg ctggcgctgt cccagctgct cgtgacctat cacctcgtca aggccgcgct
      121 cggccactac gcaagatgaa ccaagaggaa ccgacgatga ccgctcaagc gcctgctgcc
      181 accattgccg agatggcgaa cgccatccgc ttcctgtcga tggacgccat cgaaaaggcg
      241 aagtccggtc accccggcat gcccatgggc atggccgacg tggccgccgt gctgtacacg
      301 cgcttcctca agttcgacgc caaggctccg cgctgggccg accgcgaccg cttcatcctg
      361 tcggccggcc acggttcgat gctgctgtac tcgctggcct acctgaccgg ctacgaggac
      421 atcgacctcg accaggtcaa gaacttccgc cagctgggcg cccgcaccgc cggccacccg
      481 gaattcggcc acgtcgccat cgccgacacc accaccggcc cgctgggcca gggcatcacc
      541 aacgccgtcg gcttcgcgct ggccgaggcg atgcaggccg cccgctacgg caaggacgtg
      601 gtcgaccact acacctacgt catcgccggc gacggctgcc tgatggaagg catcagccag
      661 gaagccatca ccatggccgg ccactggcgc ctcaacaagc tgatcgtgct gtgggacgac
      721 aaccacatct gcatcgacgg cgacaccagc ctgtccacct cggacgacca ggccaagcgc
      781 ttccaggccg ccggctggaa caccctggcc tgcgacggcc acgaccccga cgccatcacc
      841 aaggccatcg aggcggcccg caagtcggac aagccgacca tgatcgcctg ccgcaccgtc
      901 atcggtaagg gcgcccccaa caagtgcggt tcggaaaagg tccacggcgc gccgctgggt
      961 gccgaggaaa tcgccgccgc ccgcgccgcc gtcaactggc cggccgagcc cttcgccgtt
     1021 cccgaccacg tgctggccgc ctggcgcgcc gccggcaccc gcggcgccgc cgagcgcacc
     1081 gcctgggaag gccgcttcgc caagctggac gcggccaaga aggccgagtt cacccgcacc
     1141 aacgaaggcc gcctgcccga cggctggcag aaggcgatca tcgacttcaa gaagaagatg
     1201 tcggccgagc agcccaagct ggcgacccgc aaggccagcc aggaagtgct ggaagtcgtc
     1261 accgccgcca tccccgagat gatcggcggc tccgccgacc tgacccactc gaacctgacc
     1321 gacaccaagg cctgcaagcc ctcgatcaag ccgggcgagt tcggcggccg ctacatccac
     1381 tacggcatcc gcgagcacgg catggccgcg gtgatgaacg gcctcagcct gcacggcggc
     1441 ttcatcccct atggcggcac cttcatgatc ttcgccaact acctgtggcc ggcgttgcgc
     1501 atgagcgcca tgatggacca gcgcgtgctg tacgtgctga cccacgattc catcggcctg
     1561 ggcgaggacg gccccaccca ccagcccatc gagaccctgg ccgccctgcg cgccaccccg
     1621 aacgtgctgg tgttccgccc ctgcgatccg atcgagaccg ccgaggccta tgagtgcgcg
     1681 ttgctcaacg acaagggtcc gagctgcttc gccctgtcgc gccagaacct gccgacgctg
     1741 cgcaccgagc acaccgacga gaacaagacc gccaagggcg cctatgtgat gtcggaagcc
     1801 aagggcaagc gccaggtcac catcatcgcc accggctcgg aagtcagcct ggccctggac
     1861 gcccagaagc tgctgcagga aaagggcgtc ggcgccgccg tggtgtcgat gccgtgctgg
     1921 gagttgttcg accgccagcc gaaggagtat cgtgccgccg ttctgggtga aggttccgtg
     1981 cgcgtcgccg tcgaggcgct gggcaccttc ggctgggagc gttatgtcgg caccgagggg
     2041 gccgtgatcg gcatgcccgg tttcggcgcc tcggccccgg ccgagaagtt gtacgagcat
     2101 ttcggcatca ccgcccgcgc cgtcgccgac gcagccctcg cccggctgta agacgcgcgg
     2161 acggcaagaa cttatcgggg ctgacgcgga ccgccacccc tcaccgtcat ggccgggctt
     2221 gacccggcca tccacgccgg cgtcgccggc agacgaaagt cgcgggcttg gcccgcatgg
     2281 acccccgggt caagcccggg ggtgacggac gaggaggcag accgtttagc ccccgcaaca
     2341 agggagataa atcctcatgg ctctcgtttc tatgcgtcag ctgctggacc atgcggcgga
     2401 gaacggctac ggcctgccgg cgttcaacgt caacaacatg gagcaggtga aggcgatcat
     2461 ggaggccgcc caggccacca acagcccggt catcctccag ggctcggccg gcgcccgcaa
     2521 gtatgccggc gagcccttcc tgcgccacct gatcctggcg gcgatcgaag cctatcccga
     2581 catcccggtg tgcatgcacc aggaccacgg caccagcccg gccgtctgcg cccgcgccat
     2641 ccagtccggc ttctcgtcgg tcatgatgga cggctcgctc aaggaagacg gcaagacccc
     2701 gtccgattgg gactacaacg tcaacaccac cctggccgtg gtgaagatcg cccacgcctg
     2761 cggcgtgtcg gtcgagggtg agctgggctg cctgggttcg ctggaaaccg gccaggccgg
     2821 cgaggaagac ggtgtgggtg ccgaaggcac gctggaccac tcgcagctgc tgaccgaccc
     2881 caacgaggcc gccgagttcg tcaagctgac ccaggtggac gccctggcca tcgccatcgg
     2941 caccagccac ggcgcctaca agttcaccaa gaagccgacc ggcgcggtgc tgcgcatcga
     3001 ccgcatcaag gaaatccatg cccgcatccc caccacccac ctggtgatgc atggctcgtc
     3061 ctcggtgccg caggattggc tggagatcat caacaattac ggcggcgaca tgggccagac
     3121 ctatggcgtg ccggtggaag agatcgtcga gggcatcaag cacggcgtcc gcaaggtcaa
     3181 catcgacacc gacctgcgca tggcctcgac cggctcgatc cgcaagtacc tggcggagaa
     3241 caagaaggac ttcgatccgc gcaagtacta caaggtcgcc caggacgcca tggtcggcat
     3301 ctgcaaggcc cgctacgagg ccttcggcgc cgccggccag gccgccaaga tcaaggcgcg
     3361 ctcgctggag accatgttcg acatgtacgc caagggctcg ctcgatcaga agatcgtgtg
     3421 atcctgctta agccctctct cgccctgcgg gagagggtgg cgcgaagcgc cgggtgaggg
     3481 aaacgcggac tccgagttcg cggcgccctc accctcccgc ctccggcggg cccctccctc
     3541 tcccgcaggc gggcgagggc aatcaaagaa atctcgggag actcacgaaa tgtccgtcaa
     3601 gatcgccccc tccatcctgt ccgccgactt cgcccgcctg ggcgaggaag tcaaagccat
     3661 cgacgaagcg ggctgcgact gggtccacat cgacgtgatg gacggccatt tcgttcccaa
     3721 cctgaccttc ggcccgccga tcatcaaggc gatccgcccg tggaccaaga aggtgttcga
     3781 cgtccacctg atgatcgacc cggcgcagcc ctacctcgag gattacgcca aggccggcgc
     3841 cgactacatc accatccacg ccgaggccga caagcacatc gaccgctcgc tgcagttcat
     3901 caagagcctg ggcaagaagg ccggcatc
//
LOCUS       DATIKR010000597         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_154315, whole genome shotgun sequence.
ACCESSION   DATIKR010000597 DATIKR010000000
VERSION     DATIKR010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154315"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VLL76_09365"
     CDS             complement(<1..452)
                     /locus_tag="VLL76_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29759.1"
                     /translation="MNRPRRQQRFRHAAEGEGFLLEEFLGCPADPTVDPLESEAMPAG
                     RAHARSMGEDERRFVRLGQRQQLLAVVPRPPAAGESLHIVGNGLYDFWTFVPQMIAWA
                     GGRAEELYVSTWTAARPGVVELLELIDAGAIRKTAYLTGLYFKRRETAV"
     gene            complement(658..>1519)
                     /locus_tag="VLL76_09370"
     CDS             complement(658..>1519)
                     /locus_tag="VLL76_09370"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HSV29760.1"
                     /translation="DCRAPDVVGRLMDGQDAACVWTDPPYGVSYQAASGKHLAIRNDE
                     KTGDELAGSLLISAFVQGMLHSLPAAAWYIWHAAEAAEAFRFAIAAAGLQVLQTIVWT
                     KNNHVQGWADYHWAHEPCFYACRQGCRPTWHAGRDQTTAWRLAVDTSAEISAALGTGL
                     ELQDGAGNSLFLSPRPPGRTVRSFRLQEGQSMRVQSDSARADAWQVSRDHQVAHPTQK
                     PVELALRAIRNSTAPGAVVYDPFAGSGACILAAEQSGRLARCCELEPVHCDAIVQRWE
                     RMTGKTATRT"
BASE COUNT          195 a          544 c          546 g          234 t
ORIGIN      
        1 acggccgtct ctcgccgctt gaagtaaagc cccgtaaggt acgccgtctt gcggatcgcc
       61 ccggcgtcga tcagctccag cagctccacc acgcccggcc gggcggccgt ccaggtggag
      121 acgtagagct cctcggcccg cccgccggcc caggcgatca tctgggggac gaacgtccag
      181 aagtcataca ggccgttgcc gacgatatgc aaactctcgc ctgccgccgg cggccggggc
      241 acgacggcca aaagctgctg gcgctggccg aggcgcacga accgccgctc gtcctcgccc
      301 atcgatcggg cgtgagcgcg gcccgcgggc attgcctcgc tttccagcgg atcgacggtc
      361 gggtccgccg ggcagcccag gaattcctcc agcaggaacc cctcgccctc ggcggcatgg
      421 cggaaccgct gctggcggcg tggccggttc atattcgccc ccccccgatt tgtcggccga
      481 ctccagccgc gggccccatc cggccgatac cgtgtacgtc gttcatgcgt tttcgtcatt
      541 ccgtgatcgc ctttcggttt gtccgtccgg ttgtgtcggg tccctgccgt ggggcgcggt
      601 gttgcaacca ccgcggcggc cggccagcgt gatcgccgcc ggccgcgccc ggcctgttca
      661 tgttcgcgtc gcggtcttcc ccgtcatccg ctcccatcgc tgcacgatcg cgtcgcagtg
      721 cacgggctcc agctcgcagc agcgggccag ccggcccgac tgctcggccg ccaggatgca
      781 ggcgccgctg ccggcgaagg ggtcgtacac gacggccccg ggcgcggtgc tgttgcggat
      841 cgcccgcagt gccagctcga cgggtttctg cgtggggtgg gccacctggt ggtcgcgcga
      901 gacctgccag gcgtcggcgc gggccgagtc ggactggacc cgcatcgact ggccttcctg
      961 caggcggaag ctccgcacgg tccgccccgg cgggcggggc gagagaaaga gcgaattgcc
     1021 cgcgccgtcc tgcagctcca ggcccgtgcc aagggcggcg gagatctcag cggacgtgtc
     1081 cacggccagc cgccaggcgg tggtctggtc gcggccggcg tgccaggtgg gccggcagcc
     1141 ctggcggcat gcgtagaagc acggctcgtg ggcccagtgg tagtcggccc agccctggac
     1201 gtggttgttc ttcgtccaga cgatcgtctg caggacctgc aggccggcgg cggcgatggc
     1261 gaagcggaag gcctcggcgg cctcggccgc gtgccagatg taccaggcgg ccgccggcag
     1321 cgagtgcagc atcccctgca cgaaggcgga gatcagcagc gagccggcca gctcgtcgcc
     1381 ggtcttctcg tcgttgcgga tggccaggtg cttgccgctg gcggcctggt aggaaacgcc
     1441 gtagggcgga tcggtccaga cgcaggcggc gtcctggccg tccatcagcc ggccgacgac
     1501 gtcgggcgcc ctgcagtcg
//
LOCUS       DATIKR010000598         4072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_154385, whole genome shotgun sequence.
ACCESSION   DATIKR010000598 DATIKR010000000
VERSION     DATIKR010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4072
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154385"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1365
                     /locus_tag="VLL76_09375"
     CDS             <1..1365
                     /locus_tag="VLL76_09375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE3 domain-containing protein"
                     /protein_id="HSV29761.1"
                     /translation="DGQGLTPFKIGAEYTIITALAATMYLLHRKAADFDPRMRELLIL
                     CIGVKIASELAFTLYADPYGLSNFMGHIFKIVSSYLFLRAIVETGLRRPQAMIFGSLE
                     REKMLAEEVQRHATTLDAVLDASPDPVMMFDGDCRFRFASRAAETFFRRPAAELVGKT
                     WRENGLPEATMAPIEDLCRRVLAGGESATHEYSIVGRDGICCLEAQVSPVQRGGDSPT
                     AVVAVVRDISVRKSMEEDLKASLDDNRVLMMEVHHRVKNNLQIVSSILQMQGWRLHDP
                     EMRGQFEEACGRILSLAKVHEMLYKEDNASAVDFGRYIQTLSGELFAMYGVRPDWVSL
                     KLSGAGLFLSLDRAVPLALIVHELITNSIKHAFDEKGGELSIAIAEDGPDFARLVVSD
                     DGKGMVEAEIEGESSSLGMRMVAVLVKQIDGSITFDRAAGTTVTIRFPVAGVQTSAAE
                     LSVI"
     gene            complement(1372..2667)
                     /locus_tag="VLL76_09380"
     CDS             complement(1372..2667)
                     /locus_tag="VLL76_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV29762.1"
                     /translation="MTTTAAVPTALLAQAQKLAETQRLAEAVAVLAGSDHPECDYRRA
                     SLLMLLKRWPEAEAAYRRVLKTAPNHLDTALGLASALIEQDRAAEALPLLGAAARAQP
                     GSGRIRYLHGIALDEAGRATEAEAELRVARDLVIRPADARKLVPWEIYLQVSRRCNLR
                     CAMCGHEVWQSNSGFMEPDVFDRVLEQAKANGIDTLHILSGQGEPLLHPRIFEMLEQA
                     VAGGFKVGIVTNGTPLTPDRINRLAGLGLAYIQFSFAGWDKDSYEGVYVGARFEKVIE
                     NLKAMDAALPPGGKTSFAVKAVAAGDWKTTLEKTKGFLSGHGIERVYTVIANNFGGTV
                     QCGGFHEKHGVWSQKSIAHHRRMPCRVLLKAVGVFCDGTVTACGCYDSNAELKIGHIM
                     EQDLAAIRQGQAFRTILDAFRSGDLAGIPMCGKCDDPFG"
     gene            2752..>4072
                     /locus_tag="VLL76_09385"
     CDS             2752..>4072
                     /locus_tag="VLL76_09385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSV29763.1"
                     /translation="MHQPSQPESQAVPGQSTKRWRMGVRAQLLVAIVAIGVMTLGAAF
                     ATWRSYSEIEILLATVTRGNLPSVSSALKLSEATARLAAAAPALDVSQTQFQRQSNFI
                     ALQQQSERLRGLIESLEGNHVESGQLDELRGLMAAIGDNVLGRNALVDRRIVLAERMR
                     SMMAEVEEMDDDVHKVLERRHGDPSVASLVNAIDLMRSIMGVPTVDRLAAKRRAYDEE
                     ARKLVVLVEGSDRQIDDAARQAIGMGSGPENVFEVRAQQLLTESRLAAANEEGRDLVA
                     RTSSVVGRLVAAAESEASANEARAEDALTQGRRILLLIALGTFLGPLLFVWIYVGRNI
                     VVRMAGVAQSMHRIVAGDYATPIARSGNDEISDMADALVVFRDAMAQLRESSAALRSS
                     EQRLRTILDTSPLALAISRASDNRLLYVNPRWRETYGLGDAEAVGRDA"
BASE COUNT          637 a         1368 c         1386 g          681 t
ORIGIN      
        1 gatggccaag gcctgacgcc attcaagatc ggggccgaat acacgatcat caccgcgctg
       61 gcggcgacca tgtacctgct gcaccgcaag gccgccgatt tcgacccgcg catgcgcgag
      121 ctgctgatcc tgtgcatcgg cgtcaagatc gcctcggaac ttgccttcac gctgtatgcc
      181 gacccctatg gcctgtccaa cttcatgggc catattttca agatcgtttc cagctacctg
      241 tttctgcgcg ccatcgtcga gaccggcctg cgtcgccctc aggcgatgat cttcggttcg
      301 ctcgagcgcg agaagatgct ggccgaagag gtgcagcgcc acgccaccac gcttgacgcg
      361 gtgctggacg cgtcgcccga cccggtgatg atgttcgacg gcgattgccg cttccgcttc
      421 gccagccgcg ccgccgaaac cttcttccgc cgtccggccg ccgagttggt gggcaagacc
      481 tggcgcgaaa acggcctgcc cgaggcgacc atggcgccga tcgaggatct gtgccgccgc
      541 gtgctggccg gcggcgaatc ggcgacccac gaatattcca tcgtcggccg cgacggtatc
      601 tgctgcctcg aggcgcaggt gtcgccggtg cagcgcggcg gcgacagccc gacggcggtg
      661 gtcgcggtgg tgcgcgacat cagcgtgcgc aagtccatgg aagaggacct caaggcctcg
      721 ctggacgaca accgcgtgct gatgatggaa gtccaccacc gggtgaagaa caacctgcag
      781 atcgtgtcgt cgatcctgca gatgcagggc tggcgcctgc acgaccccga gatgcgcggc
      841 cagttcgagg aagcctgcgg ccgcatcctg tcgctcgcga aggtccacga gatgctctac
      901 aaggaggaca acgcctccgc cgtggatttc gggcgttaca tccagaccct gtccggcgag
      961 ctgttcgcca tgtacggcgt gcggcccgat tgggtgtcgc tgaagctgtc cggtgccggc
     1021 ctgttcctgt cgctggatcg cgccgtgccg ctggcgctga tcgtccatga attgatcacc
     1081 aattcgatca agcatgcctt cgacgaaaag ggcggcgagc tgtccatcgc catcgccgag
     1141 gacggtcccg atttcgcccg cttggttgtc tccgacgacg gcaagggcat ggtcgaggcc
     1201 gagatcgaag gtgaatccag ttcgctggga atgcgcatgg tcgcggtgct ggtcaagcag
     1261 atcgacggct ccattacctt cgaccgtgcc gccggcacca ccgtcaccat ccgcttcccg
     1321 gtcgcggggg tccagaccag cgcggcggaa ctgtcggtga tctgaaccct ctcagccgaa
     1381 cgggtcgtcg cactttccgc acatgggaat tcccgccagg tcgcccgagc ggaaggcgtc
     1441 gaggatggtc cggaacgcct ggccctggcg gattgcggcc aggtcctgct ccatgatgtg
     1501 gccgatcttc agttcggcgt tggaatcata gcagccgcag gcggtgacgg tgccgtcgca
     1561 gaacacgccg accgccttca agaggacgcg gcacggcatg cggcggtggt gggcgatgga
     1621 cttctgcgac cacacgccat gcttctcgtg gaagccgccg cattgcacgg tgccgccgaa
     1681 attgttggcg atgaccgtgt agacccgctc gatgccgtgg ccggacagga agcccttggt
     1741 cttttccagc gtggtcttcc agtcgccggc cgcgaccgcc ttgaccgcga agctggtctt
     1801 gccgcccggc ggcagggcag cgtccatggc cttgaggttc tcgatcacct tctcgaacct
     1861 ggcgccgaca tagacgcctt catagctgtc cttgtcccac cccgcgaacg agaactggat
     1921 gtaggccagg cccagcccgg ccagccgatt gatgcggtcg ggcgtcagcg gggtgccgtt
     1981 ggtgacgatg ccgaccttga agcctcccgc caccgcctgt tccagcatct cgaagatgcg
     2041 cggatgcagc agcggctcgc cctggccgga cagtatgtgc agggtgtcga tcccgttggc
     2101 cttggcctgc tccaggacgc ggtcgaacac gtcgggttcc atgaagccgg aattgctctg
     2161 ccacacctcg tggccgcaca tggcgcagcg caggttgcag cgccgcgaca cctgcagata
     2221 gatctcccac ggcaccagct tgcgggcgtc ggccggccgg atcaccaggt cgcgggcgac
     2281 gcgcagttca gcctcggcct cggtggcgcg gccggcctcg tccagggcga tgccgtgcag
     2341 atagcggatg cggccgctgc ccggctgggc gcgcgccgcc gcgccgagca aaggcagggc
     2401 ctcggcggca cggtcctgct cgatcagggc gctcgccagc cccagggcgg tgtccaggtg
     2461 gttgggcgcc gtcttgagca cgcggcgata ggccgcctcg gcctcgggcc agcgcttcag
     2521 aagcatcagc agcgaggcgc ggcggtagtc gcattcggga tggtcggagc ccgccaggac
     2581 ggcgacggct tcggccaggc gctgggtctc ggcaagcttc tgggcctggg cgagcagggc
     2641 ggtgggaacg gctgcggtgg tggtcatggc cggcacttta gcattcgacc gcgccattgt
     2701 cgcgcccgtg caagtgcggc atgatgcaac cgttattcga gggggacgtt cttgcatcag
     2761 ccatcgcagc cggaatccca ggccgttccg ggccaatcga ccaagcggtg gcgcatgggc
     2821 gtgcgggccc agttgctggt ggccatcgtc gccatcggcg tgatgaccct gggcgccgcc
     2881 ttcgccacct ggcgcagcta ttccgagatc gagatcctgc tggcgacggt gacccgcggc
     2941 aacctgccgt cggtgtcgag cgcgctcaag ctttccgagg ccaccgcccg gttggccgcc
     3001 gccgccccgg cgcttgacgt gtcgcagacc caattccagc gccagagcaa tttcatcgcc
     3061 ctgcagcagc agtcggaacg cctgcgcggc ctgatcgaat cgctggaggg caaccacgtc
     3121 gagagcggcc agttggacga attgcgcggc ctgatggcgg ccatcggcga caatgtgctt
     3181 ggccgcaacg ctttggtcga ccgccgcatc gtgctggccg agcgcatgcg ctcgatgatg
     3241 gccgaggtcg aggagatgga cgacgacgtc cacaaggtgc tggagcggcg ccacggcgac
     3301 ccgtcggtcg cctcgctggt caacgccatc gacctgatgc gctcgatcat gggcgtgccc
     3361 accgtcgacc gcctggccgc caagcgccgc gcctatgacg aggaggcgcg caagctggtg
     3421 gtgctggtcg aaggttccga ccgccagatc gacgacgcgg cgcgccaggc catcggcatg
     3481 ggcagcggtc ccgaaaacgt gttcgaggtc cgcgcccagc aattgctgac cgaaagccgg
     3541 ctggccgccg ccaacgagga agggcgcgac ctggtggcgc gcacctcgtc ggtggtgggc
     3601 cgcctggtgg cggcggcgga atccgaggcc tcggccaacg aggcccgggc ggaggacgcg
     3661 ctgacgcagg ggcgccgcat cctgctgctg atcgcgcttg gcaccttcct cgggccgttg
     3721 ctgttcgtct ggatctatgt cggccgcaac atcgtcgtcc gcatggccgg cgtcgcccag
     3781 tccatgcacc gcatcgtcgc cggcgactac gccactccca tcgcgcgcag cggcaacgac
     3841 gagatcagcg acatggccga cgccctggtg gtgttccgcg acgccatggc gcagttgcgt
     3901 gaatcctcgg cggcgctgag gtcgagcgag cagcgcctgc gcaccatcct cgacacctcg
     3961 ccgctggcgc tcgcgatcag ccgggcatcc gacaaccggt tgctctacgt caacccgcgc
     4021 tggcgcgaga cctacggcct gggcgatgcc gaggcggtcg ggcgcgacgc cg
//
LOCUS       DATIKR010000599         6939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_32588, whole genome shotgun sequence.
ACCESSION   DATIKR010000599 DATIKR010000000
VERSION     DATIKR010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 6939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6939
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32588"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1001)
                     /locus_tag="VLL76_09390"
     CDS             complement(<1..1001)
                     /locus_tag="VLL76_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29764.1"
                     /translation="MSELVNYDNGRPLVPAEVHPLPNLLELDAEGVLDAFRSSQRDDF
                     TRVVAEVERPGAPLHTLFAQLRDRVGPDNPFHRSALFTPGALQDMFLDLNDHVLSHPV
                     WRHPFFVRVFEGRITAAQVARFATQYFNQIKNTRQCVAMAIGRFHGLMDLPYGELNER
                     ISEITQISLAQLVADEYGVGSHTVEDYPDLGHLLLAQTHIVMYRQLFDGLGIPASSQD
                     VPMLPGVADNVLTQRLVASHPAFSPLEALSSVGLGMEWGVPEFFSLILGGLIRFSERE
                     KLTLTRKHLEVFIAHVRYDVLHAVSVMLVTSLHMKGADDLAVVKNACNTLMAARFGM"
     gene            complement(998..1858)
                     /locus_tag="VLL76_09395"
     CDS             complement(998..1858)
                     /locus_tag="VLL76_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HSV29765.1"
                     /translation="MGAITWSEMMSVGVPILDADHKTLVGLINDLHRSVGDDEEYATL
                     GSVLKALADYADYHFAREERVMEACRYPALNSHIVAHHKLAQQVRELKDRYDADRTAV
                     RAKDCLNFLNKWLIEHICSTDMDYRAYVGSNPAALAAAENVTMTGARPASRGGLDWKA
                     LRILVVDDNANFLQVMRTILEGVGVREIRTANDLDAAKAALGGMDFDLMVTDWHVGRQ
                     SGLDLVRWVRGQERLAKLPLVMLSGHERVSNRDIALDAGADEFMEKPISARGLLMCLA
                     RLMTRQEASA"
     gene            complement(1884..3740)
                     /gene="ilvD"
                     /locus_tag="VLL76_09400"
     CDS             complement(1884..3740)
                     /gene="ilvD"
                     /locus_tag="VLL76_09400"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSV29766.1"
                     /translation="MPEYRSRTSTHGRNMAGARGLWRATGMTDEDFGKPIIAIANSFT
                     QFVPGHVHLKDLGQMVAREIEKAGGVAKEFNTIAIDDGIAMGHAGMLYSLPSREVIAD
                     AVEYMVNAHCADALICISNCDKITPGMLMASLRLNIPTIFVSGGPMEAGKVNIKGETH
                     AVDLIDAMIKAADKNVSDEDVAEYERSSCPTCGSCSGMFTANSMNCLAEALGLALPGN
                     GTVVATHADRKEVFLEAGRRIVDITRRYYEKNDTSVLPRSVASFEAFENAMTLDIAMG
                     GSTNTVLHILAAAQEAGIDFTMADIDRLSRRVPCLCKVAPNIADVHIEDVHRAGGIMS
                     ILGQLEKAGLLHGQCSTVHAPTMTDALNAWDISRTNDPKVQEFYKAAPGGVRTTVAFS
                     QANRWKELDADRAKGVIRSAEHAFSKDGGLAVLFGNIALDGCIVKTAGVDESCLKFSG
                     PAVICESQDEAVAKILGGAVKAGDVVVVRYEGPKGGPGMQEMLYPTSYIKSMGLGKQC
                     ALITDGRFSGGTSGLSIGHASPEAAEGGAIGLVEAGDIIDIDIPNRSINVRVSDDELA
                     KRRAAMEAKGAKAWQPVDRDRPVSQALRAYAAMTTSAARGAVRDVSQLERRR"
     gene            3849..4391
                     /locus_tag="VLL76_09405"
     CDS             3849..4391
                     /locus_tag="VLL76_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29767.1"
                     /translation="MLLAPLPALALLALLAVLALTLSSWWWLPALAWMGWIAFDGWAR
                     GAPPGTITLPGRKPPPFADSTKARLPAYVIGDFLTVCGMGRRGAVLIATAEIAEIIGQ
                     CKRECRRVGHPRPPMVMAMECLEAHCAGCGLEYGPWLKQAWRDATAKGGTELTPGAVP
                     DGEGRCPRCGGTTALLVFDC"
     gene            complement(4547..6517)
                     /locus_tag="VLL76_09410"
     CDS             complement(4547..6517)
                     /locus_tag="VLL76_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSV29768.1"
                     /translation="MKVSTLALIIAAGLAVVAAPQASASPAAERDLTVRVFVAAKKDR
                     FDEAERIALAGKNRLLAKLVRWMAYTRPNSGASFAEITSFIESSPDWPLMGPLARRAE
                     EAITAATPDEQVLAWFKTREPETVDGGMALARALLASGQGDRALKVIKKTWTEGGFGA
                     MQERQFLTLFGEHLTDDDHWKRLDRLLWEKQDGPAQRMLMKVDAGRRVLAQARLALQD
                     GKANPEPLVAQVPKQLRDDPGLIYDRVRWRRQKDLDEDAIDLLSHPARNQVKPELWWQ
                     ERSILARRALQKGLVSRAYQTAADHGLEGNTNQVAEAEFLAGWIALRFLDDRETGLAH
                     FQRLWDMTTTPLSRSRAAYWAGRASEAMNNKAQAREWYTRGARFLTAYYGQLSAARLD
                     DHNWPLPKAPEPTLDDVKKFESREMVKAIRIMLDMGANEHLRAFFIRLNDVVDSPGER
                     TLVANLAAQGGRDDLAVTVARRADRDGVFLVEQGWPVPPIAAIDSPEKALVFSLIRQE
                     SGFINDAQSPVGARGLMQLMPATAKQVAKAINLKFNPRQLDEPDVNVRLGSAYLSDLI
                     SDFEGSYILAVAGYNAGPGRARKWIREYGDPRDPNTDVIDWIEMIPFTETRNYVQRVM
                     ESVNIYRRRLGKGGQSLEADLKRWARRSAEAQ"
     gene            6712..>6939
                     /locus_tag="VLL76_09415"
     CDS             6712..>6939
                     /locus_tag="VLL76_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSV29769.1"
                     /translation="MFKGSITALITPFQNGRVDEKAFQELVAWQIAEGTHGVVPCGTT
                     GESPTLSHDEHMRVIELCVEVAKGKIPVIAGT"
BASE COUNT         1047 a         2302 c         2402 g         1188 t
ORIGIN      
        1 atcatgccga agcgggccgc catcagggtg ttgcaggcgt tcttgaccac cgccagatcg
       61 tcagccccct tcatgtgcag gctggtcacc agcatcaccg acaccgcgtg cagcacgtcg
      121 tagcggacgt gggcgatgaa gacctccagg tgcttgcggg tcagggtcag cttctcgcgc
      181 tcggagaagc ggatcaggcc gcccaggatc aggctgaaga attccggcac gccccattcc
      241 atgcccaggc cgacgctgga cagcgcctca agcggcgaga aggcgggatg cgacgccacc
      301 aggcgctggg tcagcacgtt gtcggcgaca ccgggcagca tgggcacgtc ctggcttgag
      361 gcggggatgc ccaggccgtc gaacaattgg cggtacatga cgatgtgggt ctgggccagc
      421 agcagatggc cgaggtcggg gtagtcctcg accgtgtggc tgccgacgcc gtattcgtcg
      481 gcgaccaatt gcgccagcga aatctgggtg atttcggaaa tgcgctcgtt cagttcgcca
      541 tagggcaggt ccatcaggcc gtggaagcgg ccgatggcca tggcgacgca ttgccgcgtg
      601 ttcttgatct ggttgaagta ttgggtggcg aaacgggcga cctgcgcggc ggtgatgcgg
      661 ccctcgaaca cccgcacgaa gaacggatgg cgccacaccg gatggctcag cacatggtcg
      721 ttgagatcca ggaacatgtc ctgcagcgcg ccaggggtga acagcgccga gcgatggaac
      781 gggttgtcgg ggccgacgcg gtcgcgcaac tgggcgaaca gggtgtgcag cggcgccccg
      841 gggcgctcga cctcggccac cacgcgggtg aagtcgtcgc gctggctgga gcggaaggca
      901 tccagcacgc cctcggcgtc caactcaagc aggttcggca gcggatggac ctcggccggc
      961 accagcggac ggccgttgtc gtaattcacc agttcgctca cgccgaggcc tcctgccggg
     1021 tcatcagccg cgccaggcac atcagcaggc cgcgcgcgga aatgggtttt tccatgaatt
     1081 catcggcgcc ggcatccagc gcgatgtcgc ggttggacac ccgctcgtgg cccgacagca
     1141 tgaccagcgg cagcttcgcc aggcgctcct ggccgcgcac ccagcgcacc agatcgaggc
     1201 cgctttggcg gccgacatgc caatcggtga ccatcaggtc gaaatccatg ccgcccagcg
     1261 ccgccttggc cgcatcgagg tcgttggcgg tgcggatctc gcgcacgccg acgccctcca
     1321 ggatggtgcg catgacctgc aggaagttgg cgttgtcgtc caccaccagg atgcgcaacg
     1381 ctttccagtc cagcccgcca cggctggccg gacgggcgcc ggtcatggtg acgttctcgg
     1441 ccgccgccag cgccgccgga ttgctgccca cataggcgcg gtaatccatg tcggtcgagc
     1501 agatgtgctc gatcagccat ttgttcaaaa agttcaggca gtccttggcc cgcaccgcgg
     1561 tgcggtcggc atcgtagcgg tccttcagct cgcgcacctg ctgcgccagc ttgtggtggg
     1621 cgacgatgtg ggaattgagc gccggatagc ggcacgcctc catcacccgc tcctcgcggg
     1681 cgaaatggta gtcggcgtaa tcggccagcg ccttcagcac gctgcccagc gtggcgtatt
     1741 cctcgtcgtc gccgaccgag cggtgcaggt cgttgatcag gcccaccagc gtcttgtggt
     1801 cggcgtccag gatggggacg ccgacgctca tcatctcgct ccaggtgatg gcgcccatgc
     1861 gctccccttc ccggtccgcc gccttagcgg cggcgctcca gttggctgac gtcgcgtacc
     1921 gcgccacggg ccgcgctggt ggtcatggcg gcataggcgc gcagcgcctg gctgaccgga
     1981 cggtcgcggt ccaccggctg ccacgccttg gcgcccttgg cctccatggc ggcgcggcgc
     2041 ttggccaact cgtcgtcgga gacgcggacg ttgatgctgc ggttggggat gtcgatgtcg
     2101 atgatgtccc ccgcctcgac caggccgatg gcgccgccct cggccgcttc cggcgaggcg
     2161 tggccgatgg acaggcccga ggtgccgccc gagaagcggc cgtcggtgat cagggcgcat
     2221 tgcttgccca ggcccatcga cttgatgtag ctggtcgggt acagcatctc ctgcatgccg
     2281 gggccgccct tggggccttc gtagcgcacg accaccacgt cgcccgcctt gacggcgccg
     2341 ccaaggatct tggcgaccgc ctcgtcctgg ctttcgcaga tgaccgccgg acccgagaac
     2401 ttcaggcagc tctcgtccac gccggccgtc ttcacgatgc agccgtccag cgcgatgttg
     2461 ccgaacagca cggccaggcc gccgtccttc gagaaggcgt gctcggccga gcggatcacc
     2521 cccttggcgc ggtcggcatc cagctccttc cagcggttgg cctgcgagaa cgccaccgtg
     2581 gtgcgcacgc cgccgggagc ggccttgtag aattcctgca ccttgggatc gttggtgcgg
     2641 ctgatgtccc aggcgttcag cgcgtcggtc atggtcggcg cgtgcacggt cgagcactgg
     2701 ccgtgcagca ggcccgcctt ctccaactgg cccaggatcg acatgatgcc gccggcgcgg
     2761 tggacgtcct cgatgtggac gtcggcgatg ttgggggcga ccttgcacag gcagggcacg
     2821 cggcggctga ggcggtcgat gtcggccatg gtgaagtcga ttccggcttc ctgggcggcg
     2881 gccaggatgt gcagcacggt gttggttgag ccgcccatgg cgatgtcgag cgtcatggcg
     2941 ttctcgaatg cctcgaagct ggcgaccgag cgcggcagca cgctggtgtc gttcttctcg
     3001 taataacgcc gggtgatgtc gacgatgcgg cggccggcct ccaggaacac ttccttgcgg
     3061 tcggcatggg tggcgaccac ggtgccgttg ccgggcagcg ccaggcccag ggcctcggcc
     3121 aggcagttca tggaattggc ggtgaacatg cccgagcacg agccgcaggt cgggcagctc
     3181 gaccgctcat attccgccac gtcttcgtcc gacacgttct tgtcggcggc cttgatcatg
     3241 gcgtcgatca ggtcgacggc gtgagtctcg cccttgatgt tgaccttgcc ggcctccatc
     3301 gggccgcccg acacgaagat ggtcgggatg ttgaggcgca ggctggccat cagcatgccg
     3361 ggggtgatct tgtcgcagtt cgagatgcag atcagcgcgt cggcgcaatg ggcgttgacc
     3421 atgtactcga cggcgtcggc gatgacctcg cgcgagggca gcgagtacag catgccggca
     3481 tggcccatgg cgatgccgtc gtcgatggcg atggtgttga attccttcgc gacgccaccg
     3541 gccttttcga tctcgcgcgc caccatctgg cccaggtcct tgagatggac gtggcccggc
     3601 acgaattgag tgaaggaatt ggcgatcgcg atgatcggct tgccgaaatc ctcgtccgtc
     3661 atccccgtgg cgcgccacag gccgcgggcg ccggccatgt tgcggccgtg ggtggaggta
     3721 cgggagcgat attcaggcat ttgcttgaac cttcgacgcg gagggttgga aaggatgaag
     3781 atgaaaatag ccccgccgcc cgcctgtgcc tagccccttc gggctttttg gctccgattg
     3841 gtgagaccat gctgcttgcg ccgcttcccg ccctcgccct gctggccctg ctcgcggtct
     3901 tggccctgac gttgtcgtcg tggtggtggc tgccggccct ggcctggatg ggctggatcg
     3961 ccttcgacgg ctgggcgcgc ggcgccccgc ccggcaccat caccctgccc ggccgcaaac
     4021 cgccgccctt cgcagattcg acaaaggccc gcctgcccgc ctatgtgatc ggcgacttcc
     4081 tgaccgtctg cggcatgggc aggcgcgggg ccgtgctgat cgccaccgcc gagatcgccg
     4141 agatcatcgg ccaatgcaaa cgcgaatgcc gccgcgtcgg ccacccccgc ccgcccatgg
     4201 tgatggcgat ggaatgcctt gaggcccatt gcgccggttg cggcctggaa tacggcccct
     4261 ggctcaagca ggcctggcgc gacgccaccg ccaagggcgg cacggaacta acccccggcg
     4321 cggtgccgga cggcgagggc cgctgccccc gctgcggcgg cacgacggcg ctgctggtgt
     4381 tcgattgctg acgaaggggg atcgtcaccc cggccaagcg cagcgcgagc cggggtccat
     4441 ggcagtgcac atccatggat cccgggtctc gcgatgctcg cccgggatga cggaggccag
     4501 tagcttagcg cctcggccga ccgccgcgcc tttgcggccg aaaagcctac tgcgcctcgg
     4561 ccgaccgccg cgcccagcgc ttgaggtcgg cctccagcga ctggccgccc ttgcccaggc
     4621 ggcggcggta gatgttgacg ctttccatca cccgctggac gtagttgcgg gtttcggtga
     4681 acgggatcat ctcgatccag tcgatgacgt cggtgttggg gtcgcggggg tcgccgtatt
     4741 cccggatcca cttgcgggcg cgccccggtc cggcgttgta gcccgccacc gccaggatgt
     4801 acgagccctc gaaatccgag atcaggtccg acagataggc cgagccgagg cggacgttga
     4861 cgtcgggttc gtccaactgg cgcgggttga atttcaggtt aatggccttg gcgacctgct
     4921 tggcggtggc cggcatcagc tgcatcaggc cgcgcgcgcc caccggcgac tgggcgtcgt
     4981 tgatgaagcc gctttcctgg cggatcagtg agaacaccag cgccttttcc gggctgtcga
     5041 tggcggcgat gggcggcacc ggccagccct gctcgaccag aaacacgccg tcgcggtcgg
     5101 cgcggcgcgc caccgtcacc gccagatcgt cgcggccgcc ctgggcggcc aggttggcga
     5161 ccagggtgcg ttcgccgggg ctgtcgacca cgtcgttgag gcggatgaag aaggcgcgca
     5221 gatgttcgtt ggcgcccatg tccaacatga tgcggatggc cttgaccatc tcgcggcttt
     5281 cgaacttctt gacgtcgtcg agcgtcggct cgggcgcctt gggcagcggc caattgtggt
     5341 cgtcgaggcg ggccgccgac aactggccgt aataggcggt caggaagcgg gcaccgcggg
     5401 tgtaccactc gcgcgcctgc gccttgttgt tcatggcctc ggacgcgcgg ccggcccaat
     5461 aggcggcgcg cgagcgcgac agcggcgtgg tcgtcatgtc ccacaggcgc tggaaatggg
     5521 cgaggccggt ctcgcggtcg tcgaggaagc gcagcgcgat ccagccggcc aggaactcgg
     5581 cctcggccac ctggttggtg ttgccctcca ggccgtggtc ggcggcggtc tggtaggccc
     5641 gcgacaccag ccccttttgc agcgcgcggc gcgccaggat cgagcgttcc tgccaccaca
     5701 gctcaggctt gacctggttg cgggcgggat gggacagcag gtcgatggcg tcctcgtcca
     5761 ggtccttctg gcggcgccag cggacgcggt cgtagatcag gccgggatcg tcgcgcaatt
     5821 gcttggggac ctgcgccacc agcggctcgg gattggcctt gccgtcctgc agggccaggc
     5881 gcgcctgggc cagcacgcgg cggccggcat cgaccttcat cagcatgcgc tgcgccggcc
     5941 cgtcctgctt ttcccacaac agccggtcga gccgcttcca atgatcgtcg tcggtcagat
     6001 gttcgccgaa cagggtcagg aactggcgct cctgcatggc gccgaagccg ccctcggtcc
     6061 aggtcttctt gatgaccttg agcgcgcggt cgccctgccc gctggccagc agggcgcggg
     6121 ccagcgccat gccgccgtcc acggtctcgg gttcgcgggt cttgaaccac gccagcacct
     6181 gctcgtccgg cgtcgccgcc gtgatggcct cctcggcgcg gcgggccagc ggccccatca
     6241 gcggccagtc ggggctggat tcaatgaacg aggtgatctc ggcgaagctg gcgccggaat
     6301 tgggccgggt ataggccatc caccgcacca gcttggccag cagccggttc ttgcccgcca
     6361 gcgcgatgcg ctcggcctcg tcgaagcgat ccttcttggc cgcgacgaag acccggacgg
     6421 tgaggtcgcg ctcggcggcc gggctggccg aagcctgcgg cgccgccacg acggccaggc
     6481 cggcggcgat gatcaaggcg agggtggaaa ccttcacgcg gtgcccctga aacgcgaata
     6541 ccgaaaaccg gggccattgt agggaagcgt cgaaaggcca tgcaaggtga tcggccggtt
     6601 atccccaacg aattagggtt agcggcaatt cgttcgccgt cggcttgccc gccggcccgg
     6661 taaggggtaa tgtccccgtt ttccgcgaaa ctcctctttg ggaaaccggc catgttcaag
     6721 ggatcgatca ccgcgctcat caccccgttc cagaacgggc gcgtggacga gaaagccttt
     6781 caggagctgg tcgcgtggca gatcgccgag ggcacccacg gtgtggtccc ctgcggcacc
     6841 accggcgagt cccccaccct atcgcacgac gagcacatgc gcgtcatcga actgtgcgtc
     6901 gaggtggcga aaggcaagat ccccgtgatc gccggcacc
//
LOCUS       DATIKR010000600         2444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_142517, whole genome shotgun sequence.
ACCESSION   DATIKR010000600 DATIKR010000000
VERSION     DATIKR010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142517"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..840
                     /locus_tag="VLL76_09420"
     CDS             <1..840
                     /locus_tag="VLL76_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSV29770.1"
                     /translation="FFNLPQNIPPRDTRSAGSGVIVDAQRGLVLTNNHVVEEADIIEV
                     VLKDNRTYRAKLVGRDPLTDIAVLRIDAPDLVDVPLGNSDQLNVGDFVLAVGNPFGLG
                     QTVTSGIVSALGRSGLGIEGYEDFIQTDASINPGNSGGALVNFRGELIGINTAILAPG
                     GGNIGIGFAVPINMARAVMTQLVEHGEVLRGRVGVAIQDMENGRQGAAVVQVEPRSPA
                     ARAGLRQGDVIVAIDGSPVRGATEVRNRIGLTRAGNRIELTVERGGSERVIDVTVEAA
                     RRE"
     gene            complement(871..1650)
                     /locus_tag="VLL76_09425"
     CDS             complement(871..1650)
                     /locus_tag="VLL76_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV29771.1"
                     /translation="MDLMAKVAATQVAPGTMALWFLGQNGWLVKSPAGIVLAVDPYLT
                     DSCHPSRRGLDLRRRVPVPVAPAELAADLLACTHSHKDHADVETLTACAASGRIKRFM
                     GPAETQAVFAAAGVPEAARALAWPNQVTELGDLRLTGTFALPTDTTDLTHMGLLVEVV
                     GGPKLWITGDTQWCDLLADNGAQLAPDAMAVCINGGYANLSHWQAAELVARVNPRIAI
                     PCHWDMFADNSCDPRMFWSSLTVKGIGDKYRKLDSGEGMVI"
     gene            1814..2221
                     /locus_tag="VLL76_09430"
     CDS             1814..2221
                     /locus_tag="VLL76_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29772.1"
                     /translation="MRRALVVALPLVLATVPAAAEPADDPALLLRLVPVPVEERPAAV
                     LDWYPGTSGFRVTGGRQNAGRRNGFAPYIGLGWQGSLLDGRVLIGLDFGALYQGRPDV
                     RMLAHQEALAPEPEHQDDTPFKPFISLNLVYRF"
BASE COUNT          393 a          816 c          840 g          395 t
ORIGIN      
        1 ttcttcaatc ttccacagaa cattccgcca agagataccc gctcggcggg ttccggcgtg
       61 atcgtcgatg cccagcgcgg cctggtgctg accaacaacc atgtggtcga ggaggccgat
      121 atcatcgagg tggtgctgaa ggacaaccgc acctatcgcg ccaagctggt cggccgcgat
      181 ccgctgaccg acatcgccgt gctgcgcatc gacgctcccg atctggtgga cgtgcccttg
      241 ggcaattccg accagctcaa cgtcggcgat ttcgtgctgg cggtgggcaa tcccttcggc
      301 ctggggcaga cggtgacgtc gggcatcgtc tcggcgcttg gccggtcggg gctgggcatc
      361 gagggctacg aggatttcat ccagaccgac gcctcgatca accccggcaa ttccggcggc
      421 gccctggtca atttccgggg cgagctgatc ggcatcaaca ccgccatcct ggcccccggc
      481 ggcggcaaca tcggcatcgg cttcgcggtg ccgatcaaca tggcccgcgc ggtgatgacg
      541 caactggtcg agcatggcga ggtcctgcgc ggacgcgtcg gcgtcgccat ccaggacatg
      601 gagaacggcc gccagggcgc cgccgtggtt caggtcgagc cgcgctcgcc ggcggcccgg
      661 gcgggcctca ggcagggcga cgtcatcgtc gccatcgacg gcagcccggt gcgcggcgcc
      721 accgaggtcc gcaaccgcat cggcctgacc cgcgccggca accgcatcga actgacggtc
      781 gagcggggcg gcagcgaacg cgtgatcgac gtgacggtcg aggcggcgcg gcgggaatga
      841 ccggccgccg ctaatgggca gacaaaggcc tcagataacc atgccctcgc cgctgtccag
      901 cttgcggtat ttgtcgccga tgcccttgac cgtcagcgac gaccagaaca tgcgcgggtc
      961 acaggaattg tcggcgaaca tgtcccagtg gcaggggatg gcgatgcgcg ggttgacgcg
     1021 ggccaccagt tcggccgcct gccagtgcga caggttggcg tagccgccgt tgatgcacac
     1081 cgccatggcg tcgggggcca gttgggcgcc gttgtcggcc agcaggtcgc accattgagt
     1141 gtcgccggtg atccacagct tagggccgcc caccacctcg accagcaggc ccatatgggt
     1201 caggtcggtg gtgtcggtgg gcagggcgaa ggtaccggtc aggcgcaggt cgcccagttc
     1261 cgtcacctgg ttgggccagg ccagggcgcg ggcggcttcg ggcactccgg cggcggcgaa
     1321 taccgcctgg gtctcggccg gccccatgaa gcgcttgatc cggcccgagg cggcgcaggc
     1381 ggtcagggtc tcgacgtcgg cgtggtcctt gtggctgtgg gtgcaggcca gcaggtcggc
     1441 ggccagctcg gccggcgcca ccggcaccgg cacccgccgg cgcagatcga gcccacggcg
     1501 cgacgggtgg caggaatcgg tcaggtaggg atccaccgcc agcacgatgc cggcggggct
     1561 tttgaccagc caaccgttct ggcccaggaa ccacagggcc atggtgccgg gcgccacctg
     1621 ggtcgccgcg accttcgcca tcaaatccat gcccaagcct cccgtcagcg atccttcggc
     1681 cattggtacc ccagccggcc aagcccgcca agaacgatga ccttccgatg cgagccctaa
     1741 cccatattcg cgctgcccgt cgggcacgac cgcagccata tcccagtcat ggtgattggc
     1801 ggaggacctg tccatgcgtc gtgccctggt cgtcgcgttg ccccttgtcc ttgcgacggt
     1861 gcctgcggcc gccgagccgg ccgacgaccc ggcgctgctg ctgcggctgg tgccggtgcc
     1921 ggtcgaggaa cggccggccg ccgtgctgga ttggtacccc ggcacatcgg gcttccgcgt
     1981 caccggcggc cgccagaatg ccggccggcg caacggcttc gcgccctata tcggcctggg
     2041 atggcaaggc tcgctgctgg acgggagggt gctgatcggc ctggatttcg gcgccctgta
     2101 ccagggccgg cccgacgtcc gcatgctggc gcaccaagaa gccctggccc ccgaacccga
     2161 acaccaggac gacacgccgt tcaagccgtt cattagtcta aatctagtct accgtttttg
     2221 acgatatgtt ctggtcttaa atcagttaca tcaaatatgc tggaggaaac ggcgagagag
     2281 ggagagtgga catgactgtg tccctggagg gaaagctgga acgcatcctg gtcgcgaccg
     2341 atggctcgga tttcagcgac ggtgccgagc gcctggccct tgagatggcg cttcgaagcg
     2401 gtgccagcgt caccgccatg accgtggtcc ttggcagcga gccc
//
LOCUS       DATIKR010000601         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_166194, whole genome shotgun sequence.
ACCESSION   DATIKR010000601 DATIKR010000000
VERSION     DATIKR010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166194"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..576)
                     /locus_tag="VLL76_09435"
     CDS             complement(103..576)
                     /locus_tag="VLL76_09435"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HSV29773.1"
                     /translation="MVKVLFVCTGNICRSPTAEGVFRALVEREGLGQVVTVDSAGTHG
                     YHVGEPPDTRSCAAARQRGIELSALRARKVKPSDFEEFDLVLAMDRGHHQILSQLCPK
                     GQEERLYLFMDFAPHWGIRDVPDPYYGGGDGFEKVLDMIEQGSAALLDHIRRTKL"
     gene            657..1379
                     /gene="cobB"
                     /locus_tag="VLL76_09440"
     CDS             657..1379
                     /gene="cobB"
                     /locus_tag="VLL76_09440"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD+-dependent deacetylase"
                     /protein_id="HSV29774.1"
                     /translation="MHPIPRDGSIVILTGAGISKESGLDTFRCAGGIWSKVRLEDVAT
                     PEGFARDPDLVHDFYNARRASLLDPAIQPNAAHLALARLEREWPGKVTLVTQNIDDLH
                     ERAGSGNLIHMHGELLKIRCTHCAKPMAWDGDLDVDHPCPDCGRAGRLRPHVVWFGEL
                     PLEMERIYDELERCALFLSIGTSGNVYPAAGFVMAVRQAGRAHTVELNLDPSEGATLF
                     HETRYGKATDTVPAFVDHLLSS"
     gene            1449..>1649
                     /locus_tag="VLL76_09445"
     CDS             1449..>1649
                     /locus_tag="VLL76_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29775.1"
                     /translation="MFARLSITHRIVAINLLGTMLSTVAIVALVLAIVSSSLAEQAVE
                     SQKVNLRVFQQLLREKGGGGPHL"
BASE COUNT          281 a          567 c          536 g          265 t
ORIGIN      
        1 tggttaccag cagcacctcg ccgacgcagc cgcccgacaa cggacgggtg ccggcgacct
       61 tgcggccggt caggcgttca acctgggcgg ccgcgggctc tgtcacagct tggtccggcg
      121 gatgtggtcc agcagtgcgg ccgagccctg ctcgatcatg tcgagcacct tctcgaagcc
      181 gtcgccgccg ccgtaatagg gatcgggcac gtcgcggatg ccccaatggg gcgcgaaatc
      241 catgaacagg tacagccgct cctcctggcc cttggggcag agctggctga ggatctggtg
      301 gtggccgcga tccatggcca gcaccaggtc gaattcctcg aaatcggacg gcttgacctt
      361 gcgggcgcgc aaagccgaca gctcgatgcc gcgctggcgg gcagcggcgc aggaccgcgt
      421 gtcgggcggc tcgcccacgt ggtaaccatg ggtgccggcg gaatcgacgg tcaccacctg
      481 ccccaaaccc tcgcgttcga ccagggcgcg gaacacgccc tcggcggtgg gggaacggca
      541 gatgttgccg gtacagacga acaggacctt gaccacggcg cgttccttga ccaatgacgg
      601 ctctgccggg ataccggctt atgggcaggg acgcaagagc aagcgaagga ggcatcatgc
      661 accccatccc ccgcgacggc tccatcgtga tactgaccgg ggccggcatc tccaaggaat
      721 ccggcctcga caccttccgc tgcgccggcg gcatctggtc gaaggtgcgg ctcgaggacg
      781 tcgccacgcc ggaaggcttc gcccgcgacc ccgacctggt gcacgacttc tacaacgccc
      841 ggcgggcaag cctgctcgac ccggcgatcc agcccaacgc cgcccacttg gccctggccc
      901 ggctcgaacg ggaatggccg ggcaaggtaa ccctcgtcac ccagaacatc gacgacctgc
      961 acgagcgcgc cggctcgggc aacctgatcc acatgcacgg cgagttgctg aagatccgct
     1021 gcacccattg cgccaagccg atggcgtggg atggcgacct ggatgttgac catccctgcc
     1081 ccgattgcgg ccgagccggc cggctgcggc cgcacgtggt gtggttcggc gagttgccgc
     1141 tggagatgga gcgcatctac gacgagttgg aacgctgcgc gctgttcctg tccatcggca
     1201 cctcgggcaa cgtctatccc gccgccggct tcgtgatggc ggtgcgccag gccggccgcg
     1261 cccacacggt cgaactcaac ctcgatccca gcgaaggcgc gacgctgttc cacgagaccc
     1321 gctatggcaa ggcgaccgac accgtaccgg ctttcgtcga tcatttgctg tcctcatagg
     1381 tctattggct accaggacgt gtgatgctag gcttccttgg ctgcaatgca gcatcaacgg
     1441 aggtcgccat gttcgcccgg ttgtccatca cccaccgcat cgtcgcgatc aatctgctgg
     1501 gcaccatgct cagcaccgtc gccatcgtcg ccctggtcct cgccatcgtg tcgtccagcc
     1561 tggccgagca ggcggtggag agccagaagg tgaacctgcg cgtcttccag cagttgctgc
     1621 gggaaaaagg cggcggcggc ccgcatctg
//
LOCUS       DATIKR010000602         3609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_105808, whole genome shotgun sequence.
ACCESSION   DATIKR010000602 DATIKR010000000
VERSION     DATIKR010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105808"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..509)
                     /locus_tag="VLL76_09450"
     CDS             complement(45..509)
                     /locus_tag="VLL76_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HSV29776.1"
                     /translation="MPTHAEKRYLPYTVDQLFDMVADVERYPQFLPWCVASRIRKREG
                     DVFFADLVIGFKMIRERYTSKVSLDRPANRIDVVYTEGPFQYLNNHWIFEPAPDGGTT
                     IDFFVDFEFKSKILQKLMGALFNEAVRLMVHSFEKRAGQLYGPDGRLAAKGA"
     gene            complement(509..1450)
                     /gene="lipA"
                     /locus_tag="VLL76_09455"
     CDS             complement(509..1450)
                     /gene="lipA"
                     /locus_tag="VLL76_09455"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HSV29777.1"
                     /translation="MTEQAPPKVRHPEKAHRPDNPSPRKPDWIRVKAPTSEEAAEVRK
                     LMRQKNLHTVCEEAACPNIGECWKHKHATFMILGDTCTRACAFCNVKTGKPGAVDLME
                     PEHIAESVKSMGLRHVVITSVDRDDLADGGAFQFVACIEKIRALGTDCTIEILTPDFR
                     DKAGAIEAVARAKPDVFNHNLETVPRLYPTIRPGARYFESLRLLQKVKEVDPTIFTKS
                     GIMVGLGETRIEVLQVMDDMRAAGIDFITIGQYLQPTVKHAAIDRFVTPDEFEDYKAM
                     AKAKGFLMVAASPLTRSSHHADRDFAELKAARAKAAE"
     gene            complement(1603..2997)
                     /gene="lpdA"
                     /locus_tag="VLL76_09460"
     CDS             complement(1603..2997)
                     /gene="lpdA"
                     /locus_tag="VLL76_09460"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HSV29778.1"
                     /translation="MPENSFDLVVIGGGPGGYVAAIRAAQLGLKTAVVEREHLGGICL
                     NWGCIPTKALLRSADVYRNMAHAVSYGLSAGAIGFDLPAIVKRSRGVSAQLNAGVKGL
                     LKKNKVTVFDGHGKLAGRGKVQVEGKDAGVINAPHIILATGARARVLPGLEPDGKFVW
                     TYREALVPDTMPKRLLVIGSGAIGIEFASFFNALGSEVTVVEVMDRVLPVEDEEISAF
                     ARKAFEKQGMKILTSATVKGLKKNAADVAVQVEIAGKVQDIVVDRVISAVGIVPNSEK
                     LGLEGTKVKLERGHVVTNQWCETDEPGVYAIGDLTAPPWLAHKASHEGVICVEKIAGL
                     NHAHPLNIRNIPGCTYCHPQVASVGLSEAKAKEKGFEIRVGRFPFIGNGKAIALGEAE
                     GLVKTVFDAKTGELLGAHMIGAEVTEMIQGYTVAKTLETTEAELMHTVFPHPTLSEMM
                     HEAVLSAYGRAIHF"
     gene            complement(3132..>3609)
                     /locus_tag="VLL76_09465"
     CDS             complement(3132..>3609)
                     /locus_tag="VLL76_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29779.1"
                     /translation="IHFGEELKEIYADADRDRLAQRDPLTRFFVCRFRGMPKPADIAA
                     APPEAAFLMAFTAFPYLDALMDEMSVGDHVGFDEDGNWIVRRMIAGEDGGMVKAAKGP
                     VGWKFDLMPVYAAKASALADFIGVQYGGDFDAFLWRYVADHDLAFDLDQAWRPLAA"
BASE COUNT          593 a         1161 c         1197 g          658 t
ORIGIN      
        1 agaacgtccc ccattcccgg ctcccctgtt cccggtggcg gccgctaagc ccccttggcg
       61 gccaggcgtc cgtcggggcc gtagagctga ccggcgcgct tctcgaagga atgcaccatc
      121 aggcgcaccg cctcgttgaa cagcgccccc atcagctttt gcaggatctt cgacttgaac
      181 tcgaaatcca cgaagaagtc gatggtggtg ccgccgtcag gggccggctc gaagatccag
      241 tggttgttga ggtactggaa cggcccctcg gtgtagacca cgtcgatgcg gttggcgggg
      301 cgatccagcg acaccttcga cgtatagcgc tcgcggatca tcttgaagcc gatcaccaaa
      361 tcggcgaaga acacgtcgcc ttcgcgcttg cggatgcgcg acgccacgca ccacggcagg
      421 aattgcggat agcgctcgac gtcggcgacc atgtcgaaca actggtcgac cgtgtagggc
      481 agatagcgct tttccgcgtg cgtcggcatt actcggcggc cttggcgcgg gcggccttca
      541 actcggcgaa gtcgcggtcg gcatggtggg acgagcgggt cagcggcgac gccgccacca
      601 tcaggaagcc cttggccttg gccatggcct tgtaatcctc gaactcgtcg ggagtgacga
      661 agcggtcgat ggcggcgtgc ttcacggtcg gctgcaggta ctggccgatg gtgatgaagt
      721 cgatgccggc ggcgcgcatg tcgtccatca cctgcagcac ctcgatgcgg gtctcgccca
      781 gcccgaccat gatgccggac ttggtgaaga tcgttggatc gacctccttg accttctgca
      841 gcagccgcag ggattcgaaa tagcgggcgc ccggccggat ggtcgggtac aggcgcggca
      901 ccgtctcaag attatggttg aacacgtccg gcttggcacg ggccaccgct tcgatggcgc
      961 ccgccttgtc gcggaagtcg ggggtcagga tctcgattgt gcagtcggta cccagcgccc
     1021 ggatcttctc gatgcaggcg acgaactgga aggcgccgcc gtcggccaag tcgtcgcggt
     1081 ccaccgaggt gatgaccacg tgcctgaggc ccatggactt gacgctctcg gcgatgtgct
     1141 cgggttccat caggtcgacg gcgcccggct tgccggtctt gacgttgcag aacgcgcaag
     1201 cgcgcgtgca ggtgtcgccc aggatcatga aggtggcgtg cttgtgcttc cagcactcgc
     1261 cgatattggg gcaggccgcc tcttcgcaca ccgtgtgaag gttcttctgc cgcatcagct
     1321 tgcgcacttc cgccgcctct tccgaggtcg gcgccttgac gcgaatccag tcgggcttgc
     1381 gcgggctggg attgtccggg cggtgggcct tttcgggatg acggactttg ggcggagctt
     1441 gctcggtcat ggtctggata tcgtccaggg cgcgcgtggg gtcaaggaaa ttgaaagaat
     1501 gccgtcaccc cggccaagcg aagcgcgagc cggggtccat ggtggtgcac cgaacatgga
     1561 tcccgggtct cgcgatgctc gcccgggatg acggttcaca tgtcaaaaat ggatcgcccg
     1621 gccgtaagcc gacagcaccg cctcgtgcat catctcggac agggtcgggt gcgggaacac
     1681 cgtgtgcatc agctcggcct cggtggtttc cagcgtcttg gcgaccgtgt agccctggat
     1741 catttcggtc acttccgcgc cgatcatgtg ggcgcccagc aattcgccgg tcttggcgtc
     1801 gaacaccgtc ttgaccaggc cctcggcctc tcccagcgca atggccttgc cgttgccgat
     1861 gaaggggaag cggccgacgc ggatttcgaa gcccttctcc ttggccttcg cttccgacag
     1921 gccgaccgag gccacctgcg ggtggcaata ggtgcagccg gggatgttgc ggatgttgag
     1981 cgggtgggcg tggttgaggc cggcgatctt ttcgacgcag atcacgccct cgtggctggc
     2041 cttgtgcgcc agccacggcg gcgcggtcag gtcgccgatg gcatagacgc ccggctcgtc
     2101 ggtctcgcac cattggttgg tgacgacgtg gccgcgctcc agcttgacct tggtgccttc
     2161 cagcccgagc ttctcgctgt tggggacgat gcccaccgcc gagatgacgc ggtcgacgac
     2221 gatgtcctgg accttgccgg cgatttcgac ctgcacggcg acgtcggcgg cgttcttctt
     2281 caggcccttg acggtggccg aggtcaggat cttcattccc tgcttttcga acgccttacg
     2341 cgcgaaagcc gaaatctctt catcttccac tggaagaacc cgatccatca cttcaacgac
     2401 ggtaacctcg gaccccagcg cattgaagaa gctggcgaat tcgatgccga tggcgcccga
     2461 gccgatgacc agcaggcgct tgggcatggt gtcgggcacc agcgcctcgc gataggtcca
     2521 gacgaacttg ccgtcgggtt ccagccccgg cagcacgcgg gcgcgggcgc cggtggccag
     2581 gatgatgtgg ggcgcgttga tgacaccggc atccttgccc tcgacctgca ccttgccccg
     2641 gccggccagc ttgccgtggc cgtcgaacac ggtgaccttg ttcttcttca gcagcccctt
     2701 cacaccggca ttgagctgcg ccgagacgcc gcgcgagcgc ttgacgatgg ccggcaggtc
     2761 gaagccgatg gcccccgccg acaggccgta ggacacggca tgggccatgt tgcggtagac
     2821 gtcggcggag cgcagcagcg ccttggtcgg gatgcagccc cagttgaggc agatgccgcc
     2881 cagatgctcg cgctcgacca ccgccgtctt cagccccaac tgggccgcac ggatggcggc
     2941 gacatagccg ccgggaccgc cgccgatgac gaccaggtcg aagctgttct cgggcatctt
     3001 cttctccacg aagctcattc cgatccccct ttgccacccc attttcgtca tcgccgggct
     3061 tgacccggcg atccacgtcg aaggggcgca catggatgcc cggatcaagt ccgggcatga
     3121 cgaaagaaaa actaagcggc cagcggccgc caggcctggt ccaggtcgaa ggccagatcg
     3181 tgatcggcca cgtagcgcca caggaaggcg tcgaagtcgc cgccatactg gacgccgatg
     3241 aagtcggcca gggccgaggc cttggcggcg tagaccggca tcaggtcgaa cttccagccg
     3301 acggggccct tggccgcctt gaccatgccg ccgtcctcgc cggcgatcat gcggcgcacg
     3361 atccagttgc cgtcctcatc gaatcccaca tggtcgccca cgctcatctc gtccatcagg
     3421 gcatcgagat agggaaaggc ggtgaaggcc atcaggaagg ccgcctcggg cggcgcggcg
     3481 gcgatgtcgg ccggcttcgg catgccgcgg aagcggcaga cgaagaagcg agtcagcggg
     3541 tcgcgctggg ccagccggtc gcggtcggca tcggcgtaga tctccttcag ctcctcgccg
     3601 aagtggatg
//
LOCUS       DATIKR010000603         1957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_190244, whole genome shotgun sequence.
ACCESSION   DATIKR010000603 DATIKR010000000
VERSION     DATIKR010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190244"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1957)
                     /gene="glgX"
                     /locus_tag="VLL76_09470"
     CDS             complement(<1..>1957)
                     /gene="glgX"
                     /locus_tag="VLL76_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HSV29780.1"
                     /translation="LCLFDKRGAHEVERVELPEHTDEVWHGYLPEARPGLIYGYRVHG
                     PYDPMRGHRFNPHKLLLDPYARALAGRFTWHDSHFGFRLGTPKQDLILDRRDNARYMV
                     KSQVVDTAFSWHDDRRPHVPASETIVYELHVRGYTMKHPGVATQYRGTFLGLADPMVI
                     EHLVKLGVTTVELMPVHAFIDERHLVDKGLRNYWGYNPVNFFTADPRYYAESAHGDFK
                     TMVQRLHEAGLEVIMDVVYNHTAEGNHLGPTLSYKGIDNASYYRLVPGQERWYENYSG
                     CGNTLNLRHPRVLQMVMDSLRYWVTDMHVDGFRFDLAAALGREKAGFDPGSGFLDAVR
                     QDPVLSRVKLFAEPWDIGGDGYRLGGFPPGWSEWNGRYRDTVRRFWRGDGGLIGELAS
                     RVTGSSDLFGWGGRRPWTSLNFITCHDGFTLADLVSYERKHNEANHEGNRDGTDANYS
                     WNCGHEGTTQDPAVHRLRRQQMRNLIATLFLSQGTPMLLAGDEFARSQGGNNNAYCQD
                     SDVGWIDWNNIDTETLEFVRALIRLRRDHPVFRRPRFFEGRRVPGCSLKDITWVTPEG
                     SEMTQADWTLPYARSMGFILGGESCACDSPTGRQEPDDTFLVLMNAYTEIIFYTLPPA
                     VLSKGWEVVVDTARPQPVSPGEVVGAGQ"
BASE COUNT          317 a          628 c          685 g          327 t
ORIGIN      
        1 gttggcccgc ccccaccacc tcgccgggcg acaccggctg cggtcgcgcg gtgtcgacca
       61 ctacctccca gcccttggac aggacggccg gcggcagggt gtagaagatg atctcggtat
      121 aggcgttcat cagcaccagg aaggtgtcgt cgggttcctg ccggccggtc ggcgaatcgc
      181 aggcgcagga ttccccgcca aggatgaacc ccatcgagcg cgcatagggc aaggtccaat
      241 ccgcttgcgt catttcgctc ccctcgggcg tcacccaggt gatgtccttg agcgaacaac
      301 cgggcacccg gcgcccttcg aagaagcgcg gacggcggaa caccggatgg tcgcggcgca
      361 gccggatcag ggcgcgcacg aattccaacg tctcggtgtc gatgttgttc cagtcgatcc
      421 agccgacgtc gctgtcctgg caataggcgt tgttgttgcc gccctggctg cgcgcgaact
      481 cgtcgccggc cagcagcatg ggcgtgccct gggacaggaa cagggtggcg atcaggttgc
      541 gcatctgctg gcggcgcagg cggtgcaccg ccgggtcctg ggtggtgcct tcgtggccgc
      601 aattccacga gtaattggcg tcggtgccgt cgcggttgcc ctcgtggttg gcctcgttgt
      661 gcttgcgctc gtaggacacc aaatcggcca gggtgaagcc gtcgtggcag gtgatgaaat
      721 tgaggctggt ccacggccgc cgcccgcccc agccgaacag gtccgacgag ccggtgacgc
      781 ggctggccag ctcgccgatc aggccgccgt cgccgcgcca gaagcggcgc acggtgtcgc
      841 ggtagcggcc gttccattcc gaccatccgg gcgggaagcc gcccaggcga tagccgtcgc
      901 cgccgatgtc ccacggctcg gcgaacagct tgacgcgcga cagcaccggg tcctggcgca
      961 cggcatccaa aaagcccgag ccggggtcga agcccgcctt ctcgcgcccc agggccgccg
     1021 ccaggtcgaa gcggaagccg tccacatgca tgtcggtgac ccaataccgc aagctgtcca
     1081 tcaccatctg cagcacgcgc ggatggcgca ggttcagcgt attgccgcag ccggaataat
     1141 tctcgtacca gcgctcctgc cccggcacca ggcggtaata gctggcgttg tcgatgccct
     1201 tgtaggacag cgtcggcccc aggtggttgc cctcggcggt gtggttgtag accacgtcca
     1261 tgatgacttc gaggccggcc tcgtgcaggc gctggaccat ggtcttgaag tcgccgtggg
     1321 cgctttcggc gtaatagcgc gggtcggcgg tgaagaagtt gacggggttg tagccccagt
     1381 aattgcgcag gcccttgtcg accagatggc gctcgtcgat gaaggcgtgg accggcatca
     1441 gctcgacggt ggtgacgccc agcttgacca gatgctcgat caccatggga tcggccaggc
     1501 ccaggaaggt gccgcgatac tgggtcgcca cgccgggatg cttcatggtg tagccgcgca
     1561 cgtgcagctc gtagacgatg gtttccgacg cgggaacgtg cggccggcgg tcgtcgtgcc
     1621 acgagaaggc ggtgtccacc acctgcgact tgaccatgta gcgggcgttg tcgcgccggt
     1681 ccaggatcag gtcctgcttg ggcgtgccca ggcggaagcc gaaatgggaa tcatgccagg
     1741 tgaaccgccc cgccagggcg cgggcatagg ggtcgagcag cagcttgtgc gggttgaagc
     1801 ggtgcccgcg catggggtcg tagggaccat ggacgcgata gccgtagatc aggccggggc
     1861 gcgcctcggg cagatagccg tgccacacct cgtcggtatg ctcgggcagc tcgacccgct
     1921 cgacctcgtg ggcgccgcgc ttgtcgaaca ggcatag
//
LOCUS       DATIKR010000604         1790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_32685, whole genome shotgun sequence.
ACCESSION   DATIKR010000604 DATIKR010000000
VERSION     DATIKR010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32685"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VLL76_09475"
     CDS             complement(<1..378)
                     /locus_tag="VLL76_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV29781.1"
                     /translation="MMRVVLSLAKREFIRFIRQPQRVIGAVAQPLLFWLFLGAGLGGS
                     FKPPGMEQVTYLEYFYPGVMVMMMLFASIFSSITIIEDRDAGFLQGVLVAPVNRLGIV
                     LGKVLGGVSIAMVQVLIFTVAAPF"
     gene            complement(375..1340)
                     /locus_tag="VLL76_09480"
     CDS             complement(375..1340)
                     /locus_tag="VLL76_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29782.1"
                     /translation="MIVIDQLTHVYPGGRKTAPRKAIDNLSLEVREGEFAILSGPNGS
                     GKSTLFRILCGLALPSAGRISVAGHDLVTAAAKVRPILGVVFQSPAVDKHLTVAENLR
                     IHADLYGLPDFAARRDEALGWTDLAGRLDQKVDTLSGGLARQVELAKVLMTRPRVLLL
                     DEPTTGLDPASRRNFLAALLRLQRERGMTVLMTSHVFSEAENVDRVAIMSDGKLLAYD
                     TPQALKARIGTEMVVLQPAEPEAMAEKLRAEMGLAVRVHGDELRLEETENGEGLPLLE
                     RILERYRPDIRSISIKQPDLEDVFVHVTGRAVPDHAVSLEKVAGR"
     gene            complement(1401..>1790)
                     /locus_tag="VLL76_09485"
     CDS             complement(1401..>1790)
                     /locus_tag="VLL76_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29783.1"
                     /translation="ERREMVGVIPGDAVMHKRPQGRGYVRLRQTADFPWPDVEAGPGV
                     QPCHEFHHSRLENLEGEHPFAYEVIRGAGIGAKRDGIVVGNTLANYAHLRSVGPNGWA
                     ARFVAFVRQVRSTRVDGLKKLKVPVGA"
BASE COUNT          303 a          578 c          632 g          277 t
ORIGIN      
        1 gaagggtgcg gcgacggtga agatcagcac ttggaccatg gcgatggaca cgccgcccag
       61 caccttgccc agcacgatgc cgaggcggtt gacgggcgcg accagaacgc cctgcaggaa
      121 gccggcgtcg cggtcctcga tgatggtgat cgagctgaag atgctggcga acagcatcat
      181 catcaccatg acgcccggat agaaatattc caggtaggtc acctgctcca tgcccggcgg
      241 cttgaagctg ccgcctaggc cggcgcccag gaacagccag aacagcagcg gctgcgccac
      301 ggcgccgatg acgcgctggg gctggcggat gaaacggatg aactcgcgct tggcgaggga
      361 aagcacgacg cgcatcatcg gccggcgacc ttttccaaag aaaccgcatg atcgggcacg
      421 gcgcggccgg tgacgtggac aaacacgtcc tccaggtccg gctgcttgat cgagatcgag
      481 cggatgtcgg ggcgatagcg ctcgaggatg cgttccagca ggggcagacc ctcgccgttc
      541 tcggtttcct ccaggcgcag ctcgtcgccg tggacgcgca ccgcaaggcc catctcggcg
      601 cgcagctttt ccgccatggc ctcgggctcg gccggctgca gcaccaccat ctcggtgccg
      661 atgcgggcct tcagcgcctg gggcgtgtca taggccagca gcttgccgtc gctcatgatg
      721 gcgacgcgat cgacgttttc ggcttccgag aacacgtggc tggtcatcag cacggtcatg
      781 ccgcgctcgc gctgcaggcg cagcagggcg gccaggaagt tgcggcgcga ggcggggtcg
      841 aggccggtgg tcggctcgtc cagcaacagc acgcgcggcc gcgtcatcag caccttggcc
      901 aattccacct ggcgggccag gccgcccgac agggtgtcca ccttctggtc caggcggccg
      961 gccagatcgg tccagcccag ggcctcgtcg cggcgcgcgg cgaaatcggg caggccgtag
     1021 aggtcggcat gaatcctcag gttctcggcc acggtcagat gcttgtccac ggccgggctc
     1081 tggaacacca cgcccaggat cgggcggacc ttggcggcgg cggtgaccaa gtcgtggccg
     1141 gccaccgaaa tccggccggc gctgggcagc gctaggccgc acaggatgcg gaacagggtc
     1201 gatttgcccg aaccgttggg gccggacagg atggcgaact cgccttcgcg gacctccagg
     1261 gacaggttgt cgatggcctt gcgcggggcg gtcttgcggc cgcccgggta aacgtgggtg
     1321 agttggtcga tgacgatcat gcggtgagtt ttttccgtga ggcgccgcat cttccacggc
     1381 cggacgggca aggtaaagga tcaggcgccc acaggcacct taagtttctt caacccgtcc
     1441 acgcgcgtgg aacggacctg cctgacgaag gcgacaaagc gggcggccca gccattgggg
     1501 ccgacgctgc gcagatgggc gtagttggcg agcgtgttgc cgacaacgat gccgtcgcgc
     1561 ttggcaccga tgccggcgcc gcggatgacc tcataggcga agggatgctc gccctccagg
     1621 ttttccagcc gcgaatggtg gaattcgtga cagggctgca cgcccggtcc ggcctccacg
     1681 tcgggccacg ggaagtcggc ggtctggcgc aggcggacat agccgcgccc ctgcggccgc
     1741 ttgtgcatca ccgcgtcgcc ggggatgacg ccgaccatct cgcggcgctc
//
LOCUS       DATIKR010000605         3036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_166270, whole genome shotgun sequence.
ACCESSION   DATIKR010000605 DATIKR010000000
VERSION     DATIKR010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166270"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VLL76_09490"
     CDS             complement(<1..447)
                     /locus_tag="VLL76_09490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29784.1"
                     /translation="MKHDLSDLLDALEGTAYAVDTRARFIAVGARAWRRFALDNDAAE
                     LADPSVLLGCDLFDFILGDEVRQAYRQVMERARQGEPEVTLAMRCDAPDAARLMRLVV
                     SALTSKGRLAGYLFQCVLLDERARPPLGLFAFGTQGGRDQSWPTIAM"
     gene            complement(524..1141)
                     /locus_tag="VLL76_09495"
     CDS             complement(524..1141)
                     /locus_tag="VLL76_09495"
                     /inference="COORDINATES: protein motif:HMM:NF016807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HSV29785.1"
                     /translation="MLQLVYCSLATHPFSDHDLDGLLAQSRAVNGIRGITGLLVYEDG
                     AFFQVLEGPDDEVVDVMERIERDRRHGCVNVMSRTAIRRREFGDWNMALARAETNVGE
                     AVEFRVDFSMASSQTIKLLYMFQEGALRPPEKLAEVTEQVSVTIAPASHVHNRQAAQS
                     AYLVEFARAIALSMPDVAVKAAVGADGPISFNVRKAVDGGSVELF"
     gene            complement(1462..>3036)
                     /locus_tag="VLL76_09500"
     CDS             complement(1462..>3036)
                     /locus_tag="VLL76_09500"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSV29786.1"
                     /translation="VIALQADGPATILERLDTPSFAWASWRDEKSFFWTRRVEDLQAL
                     ELRAVEGGSSRIRIPCDTKGAGMAPIVSDDGNWLILLMYSPGVPGCRLFAAINSSAPD
                     FVEIDGFDSEDLNLAGWQSDGLVLVPRNGGGREIALADLTPLLNGGLPVLRLLHRDDT
                     GRLSSACALANGDVLLIDRADDGGNAFRHLSLDGKVEPVEAGAGLTWGDWTLDRNSGR
                     LLANLTRWDTPSHLVAYDPAAREFTPLRQPAAGLQLWTGRDEAIAEDGTCIPVTLLKP
                     KDMVNESDLPCLLWGYGGFGIGIRPHCMMGLEPWLAAGGMVAIAHGRGGGELGPAWHD
                     AGKGINKLNSFTDFIAVARWLAASGHTSARRLCLRGASAGGLLVLGSAVMAPDCCAAV
                     IAENPVTDMAKFTHYEDDGRYWTVEFGNPAADPDALAAIARWSPLHNLEQGRRYPATL
                     ITIARNDERVSPVHGRKMIAALQATGSAGPHLLLELDGAGHAGHATVTEDAESRATLL
                     RFAAWATGLNWQVVGK"
BASE COUNT          535 a         1015 c         1003 g          483 t
ORIGIN      
        1 catggcgatg gtcggccagg attggtcgcg accaccctga gtgccgaagg cgaacagccc
       61 cagcggcggc cgcgcccgct cgtccagcag cacgcattgg aacagatagc cggccagccg
      121 ccccttgctg gtcagcgccg acaccaccag ccgcatcaag cgcgcggcgt cgggcgcgtc
      181 gcagcgcatg gccagggtga cctcgggttc gccctgtcgc gcccgctcca tcacctggcg
      241 ataggcctgg cggacctcgt cacccaggat gaagtcgaac aggtcgcagc ccagcagcac
      301 cgacgggtcg gccagttcgg cggcgtcgtt gtcgagcgcg aagcgccgcc aggcgcgcgc
      361 acccacggcg atgaaccgcg ccctggtgtc caccgcatag gccgtgcctt ccaacgcatc
      421 caaaaggtcg ctcagatcgt gcttcatggg ttccgatatg aggcgcgacg tcgccgcccg
      481 aacccgtgga gtcgcggtat gccgatgggg gagtgacccc gcgtcagaac agctcgaccg
      541 aaccgccatc gacggccttg cggacattga agctgatggg gccgtcggcg ccgaccgccg
      601 ccttgaccgc cacgtcgggc atgctgagcg cgatggcgcg ggcgaattcc accagatagg
      661 cgctttgggc agcttggcgg ttgtggacgt ggctggcggg ggcgatggtg acgctgacct
      721 gctcggtcac ctcggccagc ttctcgggcg ggcgcaaggc gccttcctgg aacatgtaga
      781 gcagcttgat ggtctgcgac gacgccatcg agaaatccac ccggaactcg acggcctcgc
      841 ccacattggt ctcggcccgg gccaacgcca tgttccaatc gccgaattcg cggcggcgga
      901 tggcggtgcg cgacatcacg ttgacgcagc catgccgccg gtcacgctcg atccgctcca
      961 tgacgtccac cacctcgtcg tccggcccct ccagcacctg gaagaacgcc ccgtcctcgt
     1021 aaaccagcag ccccgtgatc cccctgatcc cgttgaccgc ccgcgactgc gccaacaggc
     1081 cgtcgaggtc gtggtcggag aacgggtggg tggcgaggct gcaatagacg agctgaagca
     1141 tggcgcggac cggaccgttg gaacatgggc cagcttatcc ttgccgtgtg aacgcgattg
     1201 cgggggcagg tgaacgggtg atgatgtgga aataaaaacg aggcgggtac cgctacccac
     1261 ctcgcttcat gcgcgtgtcc ggtgacggat atcttgcaat ccagcgtcag ccaacatgtt
     1321 gattcgactt gatgccggga cacgtatctc gcaaatgccc tgacccatat ggtgcaaaca
     1381 ttcggcgacc atcgacccaa aatctgcaaa ttggccagag gctggattcg ccgcttcctt
     1441 tcgctcggca aaacggtcct tttattttcc aaccacctgc caattgagcc cggtcgccca
     1501 agcggcaaac ctaaggagtg tcgcccggga ctcggcgtcc tccgtgacgg tggcgtggcc
     1561 ggcatggccg gcgccgtcca gttccagcag caggtgcggg ccggcggaac cggttgcctg
     1621 aagggccgca atcatcttgc gcccgtggac aggcgagacc cgttcgtcat tccgggcgat
     1681 cgtaatcagg gtggcgggat atctgcgccc ctgctccaga ttgtgaaggg gcgaccagcg
     1741 ggcgatggcg gcaagggcgt ccggatcggc ggcggggttg ccgaactcga ctgtccaata
     1801 gcggccatca tcctcgtagt gcgtgaactt ggccatgtcg gtgaccgggt tctcggcgat
     1861 caccgccgcg cagcaatcgg gagccatcac cgcgctgccc agcaccagca gccccccagc
     1921 gctggcgccc cgcaggcaca ggcgccgcgc ggaagtgtgg cccgacgcag ccagccagcg
     1981 cgccaccgcg atgaagtcgg tgaaggagtt cagcttgttg atgcccttgc cggcgtcgtg
     2041 ccaggcggga ccaagttcgc cgccgccgcg accatgggcg atggcgacca ttccgccggc
     2101 cgccagccac ggctccaggc ccatcatgca atgcggccgg atgccgatgc cgaaaccgcc
     2161 atagccccac agaaggcagg gcaggtcgct ctcgttcacc atgtccttgg gctttaggag
     2221 ggtgaccggt atgcaggtgc cgtcctcggc aatggcctcg tcccggcctg tccatagctg
     2281 gagacccgcc gccggttgcc ggagcggcgt aaattcccga gccgccggat cgtaggcgac
     2341 gagatgggaa ggggtatccc agcgcgtgag gttggcgagc aggcgcccgc tgttccggtc
     2401 aagggtccaa tccccccagg tgaggccggc tcccgcctcg acaggctcaa ccttcccatc
     2461 gagcgacagg tgccggaagg cgttgccgcc gtcgtcggca cggtcgatca acagcacatc
     2521 gccgttggcg agggcgcagg cgctgctcag cctgccggta tcgtcccggt gcaggagccg
     2581 gagtaccggg aggccgccgt tcagcagggg cgtcaggtcg gccagcgcga tctcgcgccc
     2641 ccctccgttc cgcggcacca gcacgaggcc atcggactgc cagccggcga gatttaagtc
     2701 ttcgctgtcg aagccgtcga tttcgacgaa gtccggggcg gaagaattga tggcggcgaa
     2761 caggcggcag ccgggcacgc cgggcgaata cataagcagg atcagccagt tgccgtcatc
     2821 gctgacgatc ggggccatgc cagcgccctt cgtgtcgcaa gggatcctga tacgggaact
     2881 gccgccctcg acagcccgta attcaagcgc ctggagatcc tcgacccgcc gagtccaaaa
     2941 gaacgatttc tcgtcacgcc acgatgccca ggcgaaggat ggcgtatcca ggcgctccag
     3001 gatggtggcg ggaccgtccg cctgcagggc gattac
//
LOCUS       DATIKR010000606         2210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_142627, whole genome shotgun sequence.
ACCESSION   DATIKR010000606 DATIKR010000000
VERSION     DATIKR010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142627"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VLL76_09505"
     CDS             complement(<1..852)
                     /locus_tag="VLL76_09505"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="von Willebrand factor type A domain-containing
                     protein"
                     /protein_id="HSV29787.1"
                     /translation="MPLHMVPAPGANDRFTEFESNRWIAVDEQPVSTFSADVDTASYA
                     FVRRSLREGRLPPVEAVRVEEMVNYFPYAYPLPDRAGEPFKATVTVAPSPWTDGAKLV
                     HIGVKGFDVARTARPRANLTFLIDTSGSMGPPDRLPLIKQAMNQLREGLHPDDSIAIV
                     TYAGDARVALEPTKGSDIAKIEAAVQSLGAAGGTHGAAGIHTAYQLAEQMFDKEAVNR
                     VILATDGDFNIGETNPKRLEEIVASKRKTGIYLTVLGVGIGNLNDGLMQRLAQTGNGQ
                     AAYLDSLL"
     gene            complement(1141..>2210)
                     /locus_tag="VLL76_09510"
     CDS             complement(1141..>2210)
                     /locus_tag="VLL76_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HSV29788.1"
                     /translation="LGETMNRVIEQVKAMARYVFQTQSGRILGVAGPASAAMEMAVAN
                     LVEPGTRVLSVCNGFFSQRLAEMSTRCGADVEVLDVGDAQTAIPENIEAAIKRFKPAI
                     LTIVQGETSNTVWNRHLPEICTICRAHDVLIVVDAVCTLSTMPIEMDAWGVDAVITGG
                     QKGLSSIPGVSLLAFSELAWKRIEGRNAGMAQWCLDARLADRFWNKNSYHYTAPVSGI
                     MAIHEALRLICNETLPARFHRHEMCSEALQAGIEAMGLELHVPKVARLNSVVGINIPE
                     GISGDDVRRHMSQVYRVEISGAFGLNILRIGQMGEQCRGHYIFRTLHAFGSSLLANGG
                     KIDLPAGVAALERVLTGANVS"
BASE COUNT          351 a          716 c          778 g          365 t
ORIGIN      
        1 cagcaggcta tcgaggtagg cggcctggcc gttgccggtc tgggccaggc gctgcatcaa
       61 cccgtcgttg agattgccaa tgccgacccc cagcacggtc agatagatgc cggtcttgcg
      121 cttcgaggcg acgatctctt ccagccgctt ggggttggtc tcgccgatgt tgaagtcgcc
      181 gtcggtggcc aggatgacgc ggttgacggc ttccttgtcg aacatctgtt cggccagttg
      241 ataggcggtg tggatgccgg cggcgccgtg ggtgccacct gcggctccca gcgactggac
      301 ggcagcctcg atcttggcga tgtcggaccc tttggtcggc tccagcgcca cccgggcgtc
      361 gccggcatag gtgacgatgg cgatgctgtc gtcggggtgc aggccctcgc gcaattggtt
      421 catcgcctgc ttgatcagcg gcaggcggtc gggcggaccc atggaacccg aggtgtcgat
      481 caggaaggtc aggttggcgc gcggccgcgc ggtgcgggcg acatcgaagc ccttgacgcc
      541 gatatggacc agcttggccc catcggtcca cggcgacggc gccacggtga cggtggcctt
      601 gaacggctcg ccggcccggt cgggcagcgg gtaggcatag gggaagtagt tgaccatctc
      661 ctcgacccgc accgcctcga ccggcggcag ccgcccctcc cgcaacgacc tgcggacgaa
      721 ggcgtaggac gcggtgtcga cgtcggccga gaaggtggat accggctgct cgtccaccgc
      781 gatccagcgg ttgctctcga actcggtgaa acggtcgttg gcgcccggtg ccggcaccat
      841 gtgcaggggc atggcagccc caggcaaaat gtgaccggcc ctggcggccg gcgccggtgc
      901 cgccatgccc actgcccgac tggggctggc catgatggca gcctcctccg gcgcgctctc
      961 gcagcccgcc accagcgtgg cggccgccag acagagcaat ccatatcgac gcataggccc
     1021 ctcccccctc tgggttgatg aataccccaa aagagttgaa caggatcgcg gcgacaaaat
     1081 ggcggggcga aggcgattgc ggggcgcctg ccgtggtcaa gcctcggagt tcaagagcgg
     1141 ctaggaaacg ttggccccgg tcagcacccg ctccagcgcc gcgacgccgg ccggcaggtc
     1201 gatcttgccg ccgttggcca gcaggctgga gccgaaggcg tgcagggtgc ggaagatgta
     1261 atgcccccgg cactgctcgc ccatctggcc gatgcgcagg atgttgaggc cgaaggcgcc
     1321 cgagatctcg acgcggtaga cctggctcat gtggcggcgg acatcgtcgc ccgagatgcc
     1381 ctcggggatg ttgattccga ccaccgaatt caggcgcgcc accttgggca cgtgcagttc
     1441 caggcccatg gcctcgatgc cggcctgaag ggcttccgag cacatctcgt ggcggtggaa
     1501 gcgggcgggc agggtctcgt tgcagatcag gcgcagcgcc tcgtggatcg ccatgatgcc
     1561 cgacaccggc gcggtgtagt ggtacgagtt cttgttccag aaccggtcgg ccaggcgggc
     1621 gtcgagacac cattgcgcca tgccggcatt gcggccctcg atgcgcttcc aggccagttc
     1681 cgaaaaggcc agcagcgaca cgccggggat cgacgacagg cccttctggc cgccggtgat
     1741 gacggcgtcg acgccccagg cgtccatctc gatgggcatg gtcgacagcg tgcacacggc
     1801 gtccaccacg atcagcacgt cgtgggcgcg gcagatggtg cagatttccg gcaggtgccg
     1861 gttccacacg gtgttcgagg tctcgccctg gacgatggtc agaatggcgg gcttgaagcg
     1921 cttgatggcg gcttcgatgt tctcggggat ggcggtctgg gcatcgccca cgtccagcac
     1981 ttccacgtcg gcgccgcagc gggtggacat ctcggccagg cgctggctga agaaaccgtt
     2041 gcacaccgac agcacgcggg tgcccggctc gaccaggttg gcgaccgcca tctccatggc
     2101 ggccgaggcc gggccggcga cgcccaggat gcgcccggac tgggtctgga agacatagcg
     2161 ggccatggcc ttcacctgct cgatgacccg attcatggtc tcgcccaggt
//
LOCUS       DATIKR010000607         2552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_105918, whole genome shotgun sequence.
ACCESSION   DATIKR010000607 DATIKR010000000
VERSION     DATIKR010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105918"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VLL76_09515"
     CDS             <1..414
                     /locus_tag="VLL76_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSV29789.1"
                     /translation="IMGVGFMAVMAAMLTGFPMPLIDAFLDFADPATAPVVAHAVTFL
                     AVAAIFQIADGAQVVGAGALRGLKDTKVPMMFAGLGYWLIAIPLGAVLAFAAGLDGLG
                     IWIGLAVGLGVVASLMLVRWVWRERLGLVPLQPHQ"
     gene            complement(397..2499)
                     /gene="glgX"
                     /locus_tag="VLL76_09520"
     CDS             complement(397..2499)
                     /gene="glgX"
                     /locus_tag="VLL76_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HSV29790.1"
                     /translation="MAVSRARIWPGSPHPLGATWDGAGANFALFSANAEKVELCLFDP
                     SGERETERIPLPEYTDEVWHGYVPDLLPGQLYGYRVHGPFEPRRGHRFNHHKLLLDPY
                     AKAIRGEVKWSDAHFAYRLGSPREDLSFDRRDNARGMPKCELVDTAFTWGEEKRPNTP
                     WPQTVIYEMHVRGLTMLHPDVPERRRGTFAGVAWPNVVEHLTGLGVTAVEFLPVHAFL
                     DDRTLVDKGLRNYWGYNSIGFFALEPRYSATGRVSEFKSMVRRLHDAGIEIILDVVYN
                     HTAEGNHLGPTLSFRGIDNASYYKLVPEDPRYYWDSTGCGNTLDLSHPRVLQMVLDSL
                     RHWVTEMHVDGFRFDLTASLAREGLHYDPGSAFFDAVRQDPVLSGVKLIAEPWDLGMG
                     GYQVGGFPPGWSEWNGRYRDVVRRYWKGDGGLVPELASRVTGSADIFGHRGRRPWASV
                     NFITAHDGFTLKDLVSFNEKHNEANQENNQDGANDNDSWNCGAEGEADDSAILALRAR
                     QQRNLLATLLLSQGTPMLLAGDEMGNSQGGNNNAYCQDNPIAWLKWDEADDELTAFVR
                     RLVGIRRRHPVFHRARFFRGRTEQGTDIVWLTPEGREKTDEDWEFTEARTLGLMLTGD
                     TGDFYYTTEGGLPQRDLVFLVLMNSFWETVPFILPGDGHRWEVWIDTSDDGRDGARYQ
                     SGDAYPLEDRSVALLVRL"
BASE COUNT          383 a          854 c          886 g          429 t
ORIGIN      
        1 atcatgggcg tcggcttcat ggcggtgatg gcggccatgc tgaccggctt tcccatgccg
       61 ctgatcgacg ccttcctcga cttcgcggac cccgccaccg cccccgtcgt ggcccacgcc
      121 gtcaccttcc tggcggtggc cgccatcttc cagatcgccg acggcgccca ggtggtcggg
      181 gccggcgcgc tgcgcggcct caaggacacc aaggtgccga tgatgttcgc cggcctgggc
      241 tattggctga tcgccatccc gctgggcgcg gtcctggcct tcgccgccgg gctggacggc
      301 ctgggcatct ggatcgggct ggcggtgggg ctgggcgtgg tggcctcgct gatgctggtg
      361 cgctgggtgt ggcgcgagcg gctgggtttg gtgccgctac agccgcacca atagcgccac
      421 cgaccggtcc tccagcggat aggcatcgcc ggactggtag cgggcgccgt cgcgcccgtc
      481 gtcgctggtg tcgatccaca cctcccagcg atggccgtcg ccgggcagga tgaacggcac
      541 cgtctcccag aacgaattca tcagcaccag gaacaccagg tcgcgctgcg gcaagccgcc
      601 ctcggtggtg taatagaaat cgccggtgtc gccggtcagc atcaggccca gggtgcgagc
      661 ctcggtgaat tcccaatcct cgtcggtctt ctcgcggccc tcgggggtca gccagacgat
      721 gtcggtgccc tgctcggtgc gcccccggaa gaagcgggcg cggtggaaca ccgggtggcg
      781 gcggcggatg ccgaccaggc ggcggacaaa ggccgtcagt tcgtcgtcgg cctcgtccca
      841 cttcagccag gcgatgggat tgtcctggca ataggcgttg ttgttgccgc cctgggaatt
      901 gcccatttcg tcgccggcca gcagcatggg cgtgccttgc gacagcagca aggtggccag
      961 caggttgcgc tgctggcggg cgcgcagggc caggatggcg gaatcgtcgg cctcgccctc
     1021 ggcgccgcaa ttccacgaat cgttgtcgtt ggcgccgtcc tggttgttct cctggttggc
     1081 ctcgttgtgc ttctcgttga acgacaccag gtcctttagc gtgaagccgt catgggcggt
     1141 gatgaagttg acgcttgccc acggccgccg gccgcgatgg ccgaagatgt cggccgagcc
     1201 ggtgacgcgc gacgccagct cgggcaccag gccgccgtcg cccttccagt atcggcgcac
     1261 cacgtcgcgg tagcggccgt tccattccga ccagccgggc gggaagccgc cgacctggta
     1321 gccgcccatg cccagatccc acggctcggc gatcagcttg acgccagaca gcaccgggtc
     1381 ctggcgcacc gcgtcgaaga aggcgctgcc ggggtcgtag tgcaggccct cgcgcgccag
     1441 gctggcggtc aggtcgaagc ggaagccgtc cacatgcatc tcggtgaccc agtggcgcag
     1501 cgaatccagc accatctgca gcacgcgcgg gtggctgagg tccagcgtgt tgccgcaccc
     1561 ggtggaatcc cagtaatagc gcgggtcctc gggcaccagc ttgtaataac tggcgttgtc
     1621 gatgccgcgg aacgacaggg tcggccccag gtggttgccc tcggcggtgt ggttgtagac
     1681 cacgtccagg atgatctcga tgccggcatc gtgcaggcgc cgcaccatgg acttgaattc
     1741 cgacacccgc ccggtggcgc tgtagcgcgg ctccagcgcg aagaaaccga tggaattgta
     1801 gccccagtaa ttgcgcaggc ccttgtccac cagcgtgcgg tcgtcgagga aggcgtgcac
     1861 cggcaggaat tcgaccgccg tcacgcccag gccggtcaga tgctcgacca cgttgggcca
     1921 cgccaccccg gcgaaggtgc cccgccgccg ctcggggacg tcggggtgca gcatggtcag
     1981 gccgcgcaca tgcatctcgt agatcaccgt ctgcggccac ggcgtgttgg gccgcttctc
     2041 ctcgccccaa gtgaaggcgg tgtccaccag ctcgcatttc ggcatgccgc gcgcgttgtc
     2101 gcggcggtcg aacgacagat cctcgcgcgg ggaacccaga cgatacgcaa aatgggcgtc
     2161 cgaccatttc acttcgcccc ggatggcctt ggcatagggg tcgagcaaca gcttgtggtg
     2221 attgaagcga tgcccccggc gcggctcgaa cgggccatgg acgcggtaac cgtagagctg
     2281 ccccggcagc aggtcgggga catagccgtg ccagacctcg tcggtgtatt cgggcagcgg
     2341 gatgcgttcg gtctcgcgct cgcccgaggg gtcgaacagg cacagctcga ccttttctgc
     2401 attagccgag aacaacgcga aattggcgcc cgccccgtcc caggtggcgc cgagcggatg
     2461 gggcgagccc ggccagatcc gggcgcggct gacggccaat ggaacctccc ttgcgcggtc
     2521 gctcccctca catgggggat cgaaccggcg gg
//
LOCUS       DATIKR010000608         2181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_154535, whole genome shotgun sequence.
ACCESSION   DATIKR010000608 DATIKR010000000
VERSION     DATIKR010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154535"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..455
                     /locus_tag="VLL76_09525"
     CDS             84..455
                     /locus_tag="VLL76_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29791.1"
                     /translation="MTDHAFYAQTLRFVAGKTERVDDRVAAMMDALTAAAADIEQSGA
                     VAVAPERIELTARAFAGVAGFLQKQILPEVVAHANQAGERQVRWSIDTSMDIVNRLLG
                     AVARGEAEATIKVELPPPPGQ"
     gene            581..844
                     /locus_tag="VLL76_09530"
     CDS             581..844
                     /locus_tag="VLL76_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29792.1"
                     /translation="MIVLGLLCAAALFLFRAIHRRGEAQLLASIGFYAGVVLFILKTS
                     PELLVPAIVLAILLASVGLVRQLASMSAAPVKAEARQAFFSDR"
     gene            complement(973..1866)
                     /locus_tag="VLL76_09535"
     CDS             complement(973..1866)
                     /locus_tag="VLL76_09535"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV29793.1"
                     /translation="MTDDIQPGNIRPEDVFAELTTFQHALADHVDWLQRWYSAIINKN
                     GADVPDPGASCCGFDRWCRDAAGPFAEFGGFAELKAQHDEVHARAAEITARSDAGTTV
                     TTSDYESLMHLLIAFGTAAQALEREAWKVLATVDPLTGLSNRQSMRDQMMRERDRTIR
                     MKQPCCVALVDVDHFKKINDAFGHPQGDRVLRAIAELLRETMRPYDMIYRYGGEEFLL
                     CLPGADLVVGAQVAERLRREIAALDIRTAKGERIPVTATIGLSAMCAELGVEDTVEQA
                     DKALYDGKRGGRNRVMVYGEG"
     gene            complement(1937..>2181)
                     /locus_tag="VLL76_09540"
     CDS             complement(1937..>2181)
                     /locus_tag="VLL76_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSV29794.1"
                     /translation="ASILMSLESTSSRCEQLARQLVVYGRPIPTAEVVEKVEAITGAD
                     VVRVAKRLFATTPTFAAIGPLDKVEGYEKVAERVKL"
BASE COUNT          313 a          737 c          745 g          386 t
ORIGIN      
        1 ctccaagccg gtggatttcg aggcgctgtc gggcatcatc gcgcggttgg cgcggccgtg
       61 agggggatga taaaagtccg gccatgaccg accatgcctt ctatgcccag accctgcgct
      121 tcgtcgccgg caagaccgaa cgggtggacg accgcgtcgc cgccatgatg gatgcgttga
      181 ccgccgccgc cgccgacatc gagcaatccg gtgccgtcgc cgtggcgccc gagcgcatcg
      241 agctgaccgc gcgcgccttc gccggcgtcg ccggcttcct gcaaaagcag atcctgcccg
      301 aggtggtggc gcacgccaac caggcgggcg agcggcaggt gcggtggtcc atcgacacct
      361 ccatggacat cgtcaaccgt ctgctgggcg cggtggcgcg cggcgaggcc gaagcgacca
      421 taaaggtgga gctgcctcct ccgcccggac aatgatcggg ctgacaccct aatacgattg
      481 ccccgcgccg tttggggtgt tcgccggatt gtcccaatgc ggcggcggga ctagcgtcga
      541 atcatgatcg caagggcggg ttgcccgcca ggaggggatc atgatcgtcc tcggtttgct
      601 gtgcgccgcc gcgctgttcc tgttccgcgc catccaccgg cggggcgagg cccagttgct
      661 ggcctcgatc gggttctatg ccggcgtcgt cctgttcatc ctcaagacct cccccgaatt
      721 gctggtgccc gccatcgtgc tcgcgatcct gcttgcttcg gtcggcctcg tccgccagtt
      781 ggcctcaatg tccgccgccc cggtgaaggc agaggcccgc caggcattct tctccgaccg
      841 atgaccggtt ttcccgcgcg gcccgtcccc ccgtcgggcc gcccctcccg tgactgcccc
      901 cggcctcaaa ccgggggctt ctttttggtg gacccgagtg gaccgtccgc ggaggcggga
      961 cgggcttgcc agtcagccct cgccgtacac catcacccgg ttgcggccgc cgcgcttgcc
     1021 gtcgtacagc gccttgtcgg cctgctcgac ggtgtcctcg acgcccagtt cggcgcacat
     1081 ggccgacagg ccgatggtgg cggtgaccgg gatgcgctcg cccttggcgg tgcggatgtc
     1141 cagcgcggcg atctcgcgcc gcagccgctc ggccacctgg gcgccgacaa ccaggtcggc
     1201 gccgggcagg cacagcagga actcctcgcc gccatagcga tagatcatgt cgtagggccg
     1261 catggtctcg cgcagcaatt cggcgatggc gcgcagcacg cggtcgcctt gcggatggcc
     1321 gaaggcgtcg ttgatcttct tgaagtgatc cacgtccacc agcgccacgc agcaaggctg
     1381 cttcatgcgg atggtgcggt cgcgctcgcg catcatctgg tcgcgcatgg attggcggtt
     1441 ggacaggccg gtcagcgggt cgacggtcgc cagcaccttc cacgcctcgc gctccagcgc
     1501 ctgcgcggcg gtgccgaagg cgatcagcaa atgcatcagc gattcgtagt cggacgtggt
     1561 gacggtggtg ccggcgtccg agcgtgcggt gatctcggcg gcgcgggcat ggacctcgtc
     1621 gtgctgcgcc ttcagttcgg cgaagccgcc gaattcggcg aaggggccgg ccgcgtcgcg
     1681 gcaccagcgg tcgaagccgc agcacgaggc gccggggtcg ggtacgtccg cgccgttctt
     1741 gttgatgatg gcgctgtacc agcgctgcag ccaatccaca tggtcggcca aggcatgctg
     1801 gaacgtcgtc agctcggcga aaacgtcttc gggccggata ttgcccggct ggatatcgtc
     1861 ggtcatcggc tcccatcccc cgataggtcg ggggaagagt ggcatatttg catgcggccg
     1921 gaaagaaacg ggtttgctac agcttcaccc gttccgccac cttctcgtag ccttccacct
     1981 tgtccagcgg gccgatggcg gcgaaggtcg gcgtggtggc gaacaggcgc ttggcgacgc
     2041 ggacaacgtc ggcgccggtg atggcctcga ccttctcgac cacctcggcg gtggggatgg
     2101 ggcggccata gaccaccaac tggcgcgcca gttgttcgca gcgcgagctg gtgctttcca
     2161 ggctcatcag gatcgacgcc t
//
LOCUS       DATIKR010000609         1790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_45964, whole genome shotgun sequence.
ACCESSION   DATIKR010000609 DATIKR010000000
VERSION     DATIKR010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45964"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VLL76_09545"
     CDS             complement(<1..487)
                     /locus_tag="VLL76_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HSV29795.1"
                     /translation="MTIVAIDGPAAAGKGTLARRLAAELGFDYLDTGLIYRAVGMNVA
                     RAGQDPADPAVAEAAAKALAPADLQASDLRNDDAAIAASKVAAIPAVRAQLLEFQRRF
                     AAQPPGGRGAVLDGRDIGTVVCPDAEAKLFVTASLEKRAERRLKELRDKGLDAIQETV
                     LA"
     gene            complement(484..>1790)
                     /gene="aroA"
                     /locus_tag="VLL76_09550"
     CDS             complement(484..>1790)
                     /gene="aroA"
                     /locus_tag="VLL76_09550"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HSV29796.1"
                     /translation="LSGAVRVPGDKSISHRALMFGALATGESIVEGLLEGDDVLRTAA
                     CMQALGAEVERLEDGRWRLFGRGVGGLMEPADVLDMGNSGTGARLLMGLVATHPFTTI
                     FTGDSSLRSRPMKRVSDPLSRMGARFFTRDGGRLPAAVVGTDKPLPITYELPVASAQV
                     KSAVLLAGLNTPGETTVIEREATRDHTELMLRHFGANVTVEHLEDGRRAITVTGFPEL
                     TGRHVRVPADPSSAAFPAVAALLVPGSEVRIEGVGMNPLRTGLYQTLREMGAQIHFDN
                     MREEGGEDVADLVVKGSSLRGVDVPAVRAPSMIDEYPILAVAASFAMGTTRMFGLSEL
                     RVKESDRFAATMRGLQACGVRVEEDGDTMIVHGTGAPPQGGATIAVNLDHRIAMSFLV
                     MGMASAEPVAVDDAEAIDTSFPGFVDLMNHLGAGIRGDENCP"
BASE COUNT          265 a          634 c          624 g          267 t
ORIGIN      
        1 ccgcaagaac ggtctcttgt atagcgtcga ggcccttgtc ccgcaactct ttcagccgtc
       61 tctcagccct tttttccagg cttgccgtga cgaacagctt ggcctcggca tcggggcaca
      121 ccaccgtgcc gatgtcgcgg ccgtcgagaa cggcgcccct gccgcccggc ggctgggcgg
      181 cgaagcggcg ctggaattcc agcaactggg cccgcaccgc cggaatcgcc gccaccttcg
      241 aggcggcgat ggcggcatcg tcgttgcgca gatcggacgc ctgcagatcg gccggcgcca
      301 acgccttggc cgccgcttcc gccaccgccg ggtcggcggg gtcctgcccc gcgcgggcga
      361 cgttcatgcc gacggcgcga tagatcaggc cggtgtcgag atagtcgaag cccagctcgg
      421 ccgccaggcg gcgcgcgagg gtgcccttac cggccgcggc ggggccgtcg atggcgacga
      481 tggtcatggg caattctcgt cgccccggat gccggcgccc aaatggttca tcaggtcgac
      541 gaagcccgga aagctggtgt ctatggcttc ggcgtcgtcc accgccaccg gctcggccga
      601 ggccatgccc atgaccagga agctcatggc gatgcggtgg tccaggttga cggcgatggt
      661 ggcgccgccc tggggcggtg cgccggtgcc atggacgatc atggtgtcgc cgtcctcttc
      721 gaccctgacg ccgcaagctt gcaggccgcg catggtggcg gcgaagcggt cactttcctt
      781 cacgcgtagc tcggacaggc cgaacatgcg ggtggtgccc atggcgaagg acgccgccac
      841 cgccaggatg gggtattcgt cgatcatcga gggcgcgcgc accgccggta catcgacgcc
      901 gcgcagggac gagcccttga ccaccaggtc ggccacgtcc tcgccgcctt cctcgcgcat
      961 gttgtcgaaa tggatctggg cgcccatctc gcgcagggtt tggtacaggc cggtgcgcag
     1021 cgggttcatg ccgacaccct cgatccgcac ctcggacccc ggcaccagca acgccgccac
     1081 cgccgggaac gccgccgagc tgggatcggc cggcacgcgc acatggcggc cggtcaattc
     1141 ggggaagccg gtcacggtga tggcgcggcg gccatcttcc aggtgctcga cggtcacgtt
     1201 ggcgccgaaa tggcgcagca tcagctcggt gtggtcgcgg gtggcctcgc gctcgatcac
     1261 cgtggtctcg cccggcgtgt tgaggccggc cagcagcacc gccgacttca cctgggccga
     1321 agccaccggc aattcgtagg tgatgggcaa aggcttgtcg gtgccgacca ccgccgccgg
     1381 caggcggccg ccgtcgcggg tgaagaagcg ggcgcccatg cgcgacagcg ggtcgctgac
     1441 ccgcttcatc ggccgcgagc gcaagctgga atcgccggtg aagatggtgg tgaaggggtg
     1501 ggtggcgacc aggcccatca gcaggcgggc gccggtgccg gaattgccca tgtcgagcac
     1561 gtcggccggt tccatcagcc cgccgacgcc gcgcccgaac aggcgccagc gcccgtcctc
     1621 gagccgctcg acctcggcgc ccagcgcctg catgcaggcc gccgtgcgca gcacgtcgtc
     1681 gccttccagc agaccctcga cgatgctttc gcccgtcgcc agcgcgccga acatcagcgc
     1741 gcgatgggaa atcgacttgt cgccgggcac ccgcaccgcg cccgaaagcg
//
LOCUS       DATIKR010000610         2724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_82327, whole genome shotgun sequence.
ACCESSION   DATIKR010000610 DATIKR010000000
VERSION     DATIKR010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82327"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1188)
                     /locus_tag="VLL76_09555"
     CDS             complement(<1..1188)
                     /locus_tag="VLL76_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HSV29797.1"
                     /translation="MTEASVVEGMYLGVLVLSGLVALSIFSSLLSFRIGAPLLLVFLG
                     VGLLAGEDGLGGIDFDDAGAAYLVGSVALAVVLFDSGFHTSFKAFRLAAVPAMVLASL
                     GVAVTAAIVALPAHFLLGVGWVEGLLLGAIVASTDAAAVFFLLRVGGITVRDRVRSLL
                     EIESGSNDPMAIFLAIILTQYLVDRSTHVGFGAVMAAEFARQYGLGIAAGLGGGFLIV
                     QALNRLGIERGLLPVAGLSLALVLFAATSLAGGSGFLAVYIAGLVAGNSRLTAPDTMR
                     RFQDGAIWLAQIAMFLTLGLLATPSEFVAVALPALAIAVVLTLVARPLAVWLCLLPFK
                     VRANETAFVSWVGLRGAVSILLSLLPMIHGMEDGRLYFNVTFLVVLVSLAVQGWTIGP
                     VARF"
     gene            1336..>2724
                     /locus_tag="VLL76_09560"
     CDS             1336..>2724
                     /locus_tag="VLL76_09560"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter-2 (CPA2)
                     family protein"
                     /protein_id="HSV29798.1"
                     /translation="MHHGIILDVIIFLAIAVVVTPLCHRLKVSPILGYLLAGSAVGPA
                     GLALIEDGEGTRSLAELGIVVLLFMIGLELSWERLKVIRHYIFGLGTAQVVVTGALAA
                     LVVNLAGMTGAGALVIGLALAFSSTAFVLQSLAERQELASQTGRVAVAVLILQDLAVV
                     PLLVLIPLVGHGDAASMAWAMALALGKAAAAMTAIFLAARLALRPIFHLVAGTRSPEA
                     FVAAALLAVIGTGFATEALGLSQALGAFLAGVMLASTEYRHQVEADLQPIRGLLMGLF
                     FLTVGMTIDLDAMILRLPEIVTGTVLLLAGKTIVLTALAVIFRFHIATALHLGLLLAQ
                     GGEFAFIVLARAGTNNLIDPANSELIASVVALSMATTPLLAMAGDWVARRHRLADARK
                     SAPGDGAADLTDHVILVGYGRVGRTVARVLEEQEIPYIAIDRDPRIVSEHRDQEEPVY
                     FGDVRKLDVLKAV"
BASE COUNT          453 a          960 c          925 g          386 t
ORIGIN      
        1 gaagcgagcc accgggccga tggtccagcc ctgcaccgcc agcgacacca gcaccaccag
       61 gaaggtgacg ttgaaataca ggcggccgtc ttccatgccg tggatcatcg gcagcaagga
      121 cagcaggatc gacaccgcgc cgcgcagtcc gacccacgac acgaaggcgg tctcgttggc
      181 cctgaccttg aacggcagca ggcacagcca caccgccagc ggccgcgcca ccagggtcag
      241 caccaccgcg atcgccagcg ccggcagcgc caccgcgacg aattccgacg gcgtcgccag
      301 caagcccagg gtcaggaaca tggcgatctg ggccagccag atggcgccgt cctggaagcg
      361 ccgcatggtg tcgggcgccg tcagccgcga atttcccgcc accagcccgg cgatgtagac
      421 ggccaggaag cccgagccgc cggccagcga ggtggcggcg aacagcacca gcgccagcga
      481 caggccggca accggcagca ggccgcgctc gatgcccagg cggttgagcg cctgcacgat
      541 caggaagccg ccgcccaggc cggccgcgat gccgaggccg tattggcggg cgaactcggc
      601 ggccatgacg gcgccgaagc cgacatgggt cgagcggtcg acgaggtatt gggtcaggat
      661 gatggccagg aagatcgcca tcgggtcgtt ggaacccgat tcgatctcca gcagcgagcg
      721 cacgcggtcg cgcaccgtga tgccgccgac ccgcagcagg aagaacacgg ccgccgcgtc
      781 ggtcgaggcg acgatggcgc ccagcagcaa tccttcgacc caccccacgc ccagcaggaa
      841 atgggcgggc aaggcgacga tggcggcggt gacggcgacg cccaggctgg cgagcaccat
      901 cgcaggcacg gcggccaggc ggaaggcctt gaagctggtg tggaagccgg aatcgaacag
      961 caccaccgcc agggcgacgc tgccgaccag ataggcggcg ccggcgtcgt cgaaatcgat
     1021 gccgcccagg ccgtcctcgc cggccagcag gccgacgccc aggaacacca gcagcagcgg
     1081 ggcgccgatg cggaacgaga gcaggctgct gaagatgctg agggcgacca ggcccgacag
     1141 caccagcacg cccagataca tgccctcgac cacacttgcc tccgtcatcc gcgtccctta
     1201 ccggtgtaag gaccgcaggc cgtcgtgtcc agcggactta ggcacgatga cacgacagaa
     1261 attacgcaga atcccgtatc ttccttagat ggcgcgagaa cgctagaacc ttcggggcca
     1321 ttggagcttt cacgagtgca tcacggcatc atcctcgacg tcatcatctt cctggccatc
     1381 gccgtggtgg tgacgccgct gtgccatcgc ctcaaggtca gcccgatcct cggctacctg
     1441 ctggccggca gcgccgtcgg gccggccggg ctcgccctga tcgaagacgg cgagggcaca
     1501 cgctcgctgg ccgaactggg catcgtggtg ctgctgttca tgatcggcct cgagctgtcg
     1561 tgggagcgcc tcaaggtcat ccgccattac atcttcggcc tgggcaccgc ccaggtggtg
     1621 gtcaccggcg cgttggcggc gctggtggtg aacctcgcgg ggatgaccgg cgccggcgcg
     1681 ctggtgatcg gcctcgcgct ggcgttctcg tccaccgcct tcgtgctgca aagcctggcc
     1741 gaacggcagg aactggcgag ccagaccggc cgcgtcgcgg tggcggtgct gatcctgcag
     1801 gatctggcgg tggtgccgct cctggtgctg atcccgctgg tggggcatgg cgacgccgcc
     1861 tcgatggcgt gggcgatggc gctggccctg ggcaaggcgg cggcggccat gacggcgatc
     1921 ttcctggcgg cgcgcctggc gctgcgcccg atcttccacc tggtggccgg cacccgctcg
     1981 cccgaggctt tcgtcgccgc cgcattgctc gcggtcatcg gcaccggctt cgccaccgag
     2041 gcgctgggcc tcagtcaggc cctgggcgcc ttcctggccg gcgtcatgct cgccagcacc
     2101 gaataccgcc accaggtcga ggccgacctg cagccgattc gcggcctgct gatgggtctg
     2161 ttttttctga ccgtcggcat gaccatcgac ctcgacgcca tgatcctgcg cctgcccgag
     2221 atcgtcaccg gcaccgttct gctgctggcc ggcaagacca tcgtgctgac ggcgctggcg
     2281 gtcatcttcc gcttccacat cgccaccgcc ctgcatctcg gcctgctgct ggcccagggc
     2341 ggcgagttcg ccttcatcgt gctggcgcgg gccggcacca acaacctgat cgacccggcc
     2401 aattccgagt tgatcgccag cgtggtggcg ctcagcatgg cgacgacgcc gctgctggcc
     2461 atggccgggg actgggtggc gcgccgccac cgactggccg acgcccgcaa gtcggccccc
     2521 ggcgacggtg ccgccgacct gaccgaccac gtcatcctgg tcggctacgg ccgcgtcggg
     2581 cgcaccgtgg cgcgggtgct ggaggaacag gagatcccct acatcgccat cgatcgcgat
     2641 ccccgcatcg tcagcgagca tcgcgaccag gaagagccgg tctatttcgg cgacgtgcgc
     2701 aaactggacg tgctcaaggc ggtg
//
LOCUS       DATIKR010000611         2906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_166487, whole genome shotgun sequence.
ACCESSION   DATIKR010000611 DATIKR010000000
VERSION     DATIKR010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166487"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1247)
                     /gene="nhaA"
                     /locus_tag="VLL76_09565"
     CDS             complement(72..1247)
                     /gene="nhaA"
                     /locus_tag="VLL76_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HSV29799.1"
                     /translation="MALTILSDALKRFLKLEASGGIVLVAAAAFAMLLANGPLAFFYT
                     ALLDLPVAVLVGALEIHKPLILWINDGLMAVFFLLVGLEIKREVAQGELSSIGQAALP
                     AIGAVGGMAVPALVYVLLNLGHPPNLAGWAIPSATDIAFALGVLALMGNRAPASLKLF
                     LLALAVMDDLGAIVIIALFYTADLSTTALALAGIAVAGLAALNMFGVRKLGPYLLVGV
                     FLWVCVLKSGVHATLAGVVVGLAIPLKGGTAGDLEHKLHPWVAYLILPVFAFANAGVP
                     LAGVTLGALLQPVPLGIMLGLFVGKQVGIFTTCWLAIRLGWAKLPEGATWLQFYGVGV
                     LAGIGFTMSLFIGTLAFPEEAGHGAGVRLGVLSGSLLSAVLGAGVLWLAGKPRVTQS"
     gene            1521..2882
                     /locus_tag="VLL76_09570"
     CDS             1521..2882
                     /locus_tag="VLL76_09570"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV29800.1"
                     /translation="MTIQFSDLGLIEPIQKAVAAEGYTTPTPIQAQAIPHLLEGRDVL
                     GIAQTGTGKTAAFALPILNRLASNPRRPDRKSARVLILTPTRELAVQIGEGFATYGAN
                     LKIRRHVIFGGVGQHPQVQALMSGLDVIVATPGRLLDLIQQGHCHLDSVEVFVLDEAD
                     RMLDMGFIHDVKKIASRLPKQRQTLLFSATMPEAIADLASGLLNQPVSVEVTPVSSTA
                     ERIDQRVLFVSREDKRNLLLDVLGDKGVSRAIVFTRTKHGANKIAEILQKGGVKADAI
                     HGNKSQNARQKALNDFRDGRIRALVATDIAARGIDVDGVTHVINFDLPNEPESYVHRI
                     GRTARAGAEGIALSFCDAEEVAYLRAIERTTKLAVPMDESHAFHAEGIAKIYQTKGRA
                     APRPSKPQQSRPHQGARPHGHSAAAKHAGGAKPKAAQGQASGARQGGGNGNGGQQARR
                     RSA"
BASE COUNT          548 a         1075 c          914 g          369 t
ORIGIN      
        1 cgcgtccccc gacgaattgc atgccgcccc ccaatccaag cggcatgttt accttaacgg
       61 gtactaattt atcaagattg cgtaacgcgc ggctttcccg ccagccacag cacccccgcg
      121 cccaaaaccg ccgacagcag cgagcccgac agcacgccca ggcgcacgcc ggcaccgtgg
      181 ccggcctctt cggggaaggc cagggtgccg atgaacaggc tcatggtgaa gccgatgccg
      241 gccagaacgc cgacgccata gaattgcagc caggtggcgc cttcgggcag cttggcccag
      301 cccaggcgga tcgccagcca gcacgtcgtg aagatgccca cctgcttgcc gacgaacagg
      361 cccagcatga tccccagcgg caccggctgc agcaacgcgc ccagggtgac gccggccagc
      421 ggcacgccgg cattggcgaa ggcgaacacc ggcaggatca aataggcgac ccacgggtgc
      481 agcttgtgtt cgaggtcgcc tgcggtgccg cccttcagcg gaatggcgag gccgaccacc
      541 acgccggcca gggtggcgtg gacgccggac ttcagcacgc acacccacag gaagacgccg
      601 accaatagat agggtccaag cttgcgcacc ccaaacatgt tcagtgccgc cagcccggcg
      661 acggcgatgc cggccagggc cagggcggtg gtggacaaat cggcggtgta gaacagggcg
      721 atgatgacga tggcgcccag gtcgtccatc accgccagcg ccagcaggaa cagcttcagc
      781 gaggccggcg cgcgattgcc catcagcgcc agcacgccca atgcaaaggc gatgtcggtg
      841 gcggacggga tggcccagcc ggccaggttg ggcggatggc ccaggttcag cagcacatag
      901 accagcgccg gcaccgccat gccgcccacc gcgccgatgg ccggcagcgc cgcctggccg
      961 atgctggaca gctcgccttg cgccacctcg cgcttgatct ccagcccgac cagcaggaag
     1021 aacaccgcca tcaggccgtc gttgatccac aggatcagcg gcttgtgtat ttcaagcgcc
     1081 ccgaccagca ccgccaccgg caggtccaac agggcggtgt agaagaacgc cagggggccg
     1141 ttggccagca gcatggcgaa ggcggcggca gccaccagca cgatgccgcc cgaggcttcg
     1201 agcttgagga aacgcttgag cgcgtcggac aggatggtga gtgccatcca cccagggtaa
     1261 gcacgccatc aggttgcgca agccagtatt aaccgaaata cgtggccgga ccgccggttc
     1321 tctgatatac actgcgccac gggccggctg gcccacggat ttttcccgga tcgcgcgagg
     1381 cgcccacggc gccctatccg agaactcccc aaaccttccc cattcccgct tggtcgcgcg
     1441 ccaaagggct gcacatccag ctcacgtcct tgccctgtca gggcgatgac gcgcgagccc
     1501 gttttgaaag accgcatcac ttgaccatcc aattctccga cctcggcctg atcgaaccca
     1561 tccagaaggc ggtcgccgcc gagggctaca ccacgcccac cccgatccag gcccaggcca
     1621 tcccgcatct gctggaaggc cgcgacgtgc tgggcatcgc ccagaccggc accggcaaga
     1681 ccgccgcctt cgcgctgccg atcctcaacc ggctggcgtc gaacccgcgc cgccccgacc
     1741 gcaagtcggc ccgcgtgctg atcctgaccc cgacccgcga gctggcggtg cagatcggcg
     1801 agggcttcgc cacctatggc gccaacctca agatccgccg ccatgtcatc ttcggcggcg
     1861 tcggccagca tccgcaggtc caggcgctga tgagcggcct cgacgtcatc gtcgccaccc
     1921 ccggccgcct gctcgacctg atccagcagg gccattgcca cctggactcg gtcgaggtgt
     1981 tcgtgctcga cgaagccgac cgcatgctgg acatgggctt catccacgac gtcaagaaga
     2041 tcgcctcgcg cctgcccaag cagcgccaga ccctgctgtt ctcggccacc atgccggaag
     2101 ccatcgccga tctggcctcg ggcctgctga accagccggt cagcgtcgaa gtcacgccgg
     2161 tgtcgtccac tgccgagcgc atcgaccagc gcgtgctgtt cgtgtcgcgc gaggacaagc
     2221 gcaacctgct gctggacgtg ctgggcgaca agggcgtcag ccgcgccatc gtcttcaccc
     2281 gcaccaagca cggcgccaac aagatcgccg agatcctgca gaagggcggc gtcaaggccg
     2341 acgccatcca cggcaacaag tcgcagaacg cgcgccagaa ggcgctgaac gacttccgcg
     2401 acggccgcat ccgcgccctg gtcgccaccg acatagcggc gcgcggcatc gacgtggacg
     2461 gcgtgaccca cgtcatcaac ttcgacctgc ccaacgagcc ggaaagctat gtccaccgca
     2521 tcggccgcac ggcgcgcgcc ggcgccgagg gcatcgccct gtcgttctgc gacgccgagg
     2581 aagtggccta tctgcgcgcc atcgagcgca ccaccaagct ggcggtgccc atggacgaga
     2641 gccacgcctt ccacgccgag ggcatcgcca agatctacca gaccaagggc cgcgccgccc
     2701 cgcgcccgag caagccgcag caatcgcggc cgcaccaggg cgcccgcccg cacggccatt
     2761 cggcggcggc caagcatgcc ggcggggcca agcccaaggc ggcccagggc caagccagcg
     2821 gcgcccgcca gggcggcggc aacggcaatg gcggccagca ggcccgtcgt cgcagcgcgt
     2881 gaccctggca tagggcgggg ccgccc
//
LOCUS       DATIKR010000612         2769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_70122, whole genome shotgun sequence.
ACCESSION   DATIKR010000612 DATIKR010000000
VERSION     DATIKR010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70122"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VLL76_09575"
     CDS             complement(<1..377)
                     /locus_tag="VLL76_09575"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HSV29801.1"
                     /translation="MTRSLRLGVNIDHVATIRNARGGRHPDPVRAAHMAEAAGADGIT
                     AHLREDRRHISDADIERLANEIQLPLNFEMAATDEMVAIALRHRPHAACIVPERREER
                     TTEGGLDVAGQMDRLRPMVARLT"
     gene            complement(389..2542)
                     /locus_tag="VLL76_09580"
     CDS             complement(389..2542)
                     /locus_tag="VLL76_09580"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HSV29802.1"
                     /translation="MMRQFELVERVKSYDPGADEDAINRAYVFAMKMHGSQLRASGDP
                     YFSHPIEVAGILTKYRLDSSTIITALLHDTIEDTPATLEDIEKLFGTEIGRLVDGVTK
                     LSRIEMQSDHAKQAENLRKLVLAMSEDIRVLLVKLADRVHNMRTLHYISKPEKRKRIA
                     METMEIYAPLAERIGMQEFKMELEDLAFAELHGDARASIIARLNFLREQGGDLIGRIL
                     AELNATLAENGVKAQVSGREKTPFSIWLKMQRKNVGFEQLSDIMAFRVVVESIEDCYR
                     ALGVIHSKYPMVPNRFKDYISTPKPNGYRSLHTGVFGPERHRIEVQIRTTEMHEMSEL
                     GVAAHWKYKSGGGGGKQTDGRQYRWLRELLDILEHASNPEEFLEHTKLEMFADQVFAF
                     TPKGDLVSLPQGATPVDFAYAVHSQVGDTCVGAKINGRIMPLRTQLQNGDQVDIITSK
                     AQTPNPTWERFVVTGKARARIRRFIRTQQRAQYVDLGRAILVRAFRQEGYDFTEKALE
                     GVLKIFKAPSVDDLVATVGEGTLTGREVVQAVFPELKAQAHRPDNVVALQRKSRQDGK
                     GKSNAVPIKGLIPGMAMHFAGCCHPLPGDRIVGIVTTGKGVTIHTIDCENLEQFADTP
                     ERWLDLSWDDSDGNAHLGRVDLVVANEPGALGSISTVIAKNLGNITNLKITNRTTDFF
                     EMIMDIEVRDVKHLTNIIAALRATPVINSVERARN"
BASE COUNT          406 a          853 c          978 g          532 t
ORIGIN      
        1 tcggtcagcc gcgccaccat gggccgcagc cggtccatct ggccggcgac gtcgaggccg
       61 ccctcggtgg tccgctcctc gcgccgctcg ggcacgatgc aggcggcgtg cgggcgatgg
      121 cgcagcgcga tggcgaccat ctcgtcggtg gcggccatct cgaagttcag cggcaactgg
      181 atctcgttgg ccagccgttc gatgtcggca tccgagatat ggcgccggtc ctcgcgcagg
      241 tgggcggtga tgccgtcggc cccggccgcc tcggccatgt gggcggcacg cacgggatcg
      301 ggatggcggc cgccgcgcgc gttgcggatg gtggcgacgt gatcgatgtt cacgccgagg
      361 cgaagggaac gggtcatggt tgtcgctctt agttgcgggc gcgctcgacc gagttgatca
      421 ccggcgtcgc gcgcagggcg gcgatgatgt tggtcaggtg cttcacgtcg cgcacctcga
      481 tgtccatgat catctcgaag aaatcggtgg tgcggttggt gatcttgagg ttggtgatgt
      541 tgcccaggtt cttggcgatc accgtcgaaa tcgagcccag ggcaccgggc tcgttcgcga
      601 ccaccagatc gacgcggccg agatgggcgt tgccgtcgct gtcgtcccac gacaggtcca
      661 gccagcgttc cggcgtgtcg gcgaactgct ccaggttctc gcagtcgatg gtgtggatgg
      721 tgacgccctt gccggtggtc acgatgccga cgatgcggtc gcccggcagc ggatggcagc
      781 agccggcgaa atgcatggcc atgcccggga tcaggccctt gatgggcacc gcgttggact
      841 tgcccttgcc gtcctgcctg gacttgcgct gcagcgccac cacgttgtcg ggccgatggg
      901 cctgggcctt cagctcgggg aagacggcct gcaccacctc gcggccggtc agggtgccct
      961 cgcccaccgt ggcgaccagg tcgtcgaccg acggcgcctt gaagatcttg aggacgcctt
     1021 ccagcgcctt ttcggtgaag tcgtagcctt cctggcggaa ggcgcgcacc aggatggcgc
     1081 ggcccagatc gacgtattgg gcgcgctgct gggtgcggat gaaacggcgg atgcgggcgc
     1141 gcgccttgcc ggtgacgacg aagcgttccc aggtcggatt gggcgtctgc gccttggacg
     1201 tgatgatgtc gacctggtcg ccgttctgca gttgggtgcg cagcggcatg atgcggccgt
     1261 tgatcttggc gccgacgcag gtgtcgccga cctgcgagtg gacggcatag gcgaagtcca
     1321 ccggcgtcgc gccctggggc aacgacacca aatcgccctt gggggtgaag gcgaagacct
     1381 ggtcggcgaa catctcgagc ttggtgtgct cgaggaattc ctcggggttg gaggcgtgct
     1441 cgaggatgtc gagcagctcg cgcagccagc gatactggcg gccgtcggtc tgcttgccgc
     1501 cgccaccgcc ggatttgtac ttccagtgcg cggcaacgcc cagttcggac atctcgtgca
     1561 tctcggtggt gcggatctgc acctcgatgc ggtgccgctc gggaccgaac acgccggtgt
     1621 gcagcgagcg gtagccgttg ggcttggggg tcgagatgta gtccttgaac cggttcggaa
     1681 ccatcggata cttggaatgg atcacgccca gcgcgcggta gcagtcctcg atggactcga
     1741 cgacgacgcg gaaggccatg atgtccgaca gctgctcgaa gccgacgttc ttgcgctgca
     1801 tcttcagcca gatcgagaac ggcgtcttct cgcggccgga aacctgggcc ttgaccccgt
     1861 tttcggccag ggtggcgttg agttccgcca ggatgcggcc gatcaggtcg ccgccctgtt
     1921 cgcgcaggaa gttcaggcgc gcgatgatcg aggcgcgggc gtcgccgtga agctcggcga
     1981 aggccaggtc ctcgagctcc atcttgaatt cctgcatgcc gatgcgttcg gccagcggcg
     2041 catagatctc catggtttcc atggcgatgc gcttgcgctt ttcaggcttc gagatgtagt
     2101 gcagcgtccg catgttgtgg acgcggtcgg ccagcttgac cagcaggacg cggatgtcct
     2161 cgctcatggc cagcaccagc ttgcgcaggt tctcggcctg cttggcatgg tccgactgca
     2221 tttcgatgcg cgacagcttg gtcacgccgt ccaccagccg cccgatctcg gtgccgaaca
     2281 gcttctcgat gtcctccagc gtcgccgggg tgtcctcgat ggtgtcgtgc agcagggcgg
     2341 tgatgatggt cgaggaatcc agccggtact tggtcaggat gccggcgact tcgatgggat
     2401 gcgagaaata ggggtcgccc gaggcgcgca attgcgagcc gtgcatcttc atggcgaaga
     2461 cgtaggcgcg gttgatcgca tcctcgtccg caccgggatc ataggatttg acgcgttcga
     2521 ccagttcgaa ttggcgcatc atgggcgcat gtccctcccc tgcgcccggg cgagggtgcg
     2581 gggcggcgca agcttcggca tgtgccgccc ctcaggcatc agtcctcgac gtcgggcatg
     2641 tcgccgccgg cgaagtcggc gtcgaaatcg acgccttcct cggacacggt catgccgtcc
     2701 tcggacagct cgtcctcgtt ggcggccatg ttctcgaacg cgatgtcgcg ctcgggcatg
     2761 aaggcctcc
//
LOCUS       DATIKR010000613         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_202716, whole genome shotgun sequence.
ACCESSION   DATIKR010000613 DATIKR010000000
VERSION     DATIKR010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202716"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1713
                     /locus_tag="VLL76_09585"
     CDS             <1..>1713
                     /locus_tag="VLL76_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29803.1"
                     /translation="DSSIGWSNMLFLQPQEMGGIMGAAFVPVALLWLVLAWLDRGRQV
                     RAVADELTQHLSRLTYPADGAEAKVKEVSESLRGQARALTEASSRAVAEGESVRAMLA
                     TQIEAMSSVVGRINGDARAAVEALRGEVDRLSQAADSATNRAREIEHLLRLQTQDLAT
                     VTDTAADKVREFGESMREHVEAIEETSTRAASRAESLSSQIQKHAEALDKVSRSAVDR
                     AENVAQMFADNAGKLAEAAEKAGTRTEDVAHTLSSRVESLDNLFTRQNTDLENSAERL
                     AENTNRISASLQQQATSLDQTTDRVLSRIKIVEEALSVQSRELNSASDQAMTRFREME
                     EVLGRHADALKVTADDASGQLGAVGEVFTQRRDDVDAAVEKAMARIREVAEAFQGQTR
                     GLSAASDQMQVRAREVSETLRLHIEDLGKGADKAASQAEAIRQTLRKQADELADAANV
                     VSTQSRLSEASLNQQSRHLISTSDQVMAKVKTIADTLRQNTNDLIAMSSRVGVELEAV
                     GENLRQRTSEVGVAAVKAIDETSSVAEILDKRSEQLATVAEQVSSRIRVTTDALRRQT
                     EQLVA"
BASE COUNT          306 a          618 c          576 g          213 t
ORIGIN      
        1 gattccagca tcggctggag caacatgctg ttcctgcagc cgcaggagat gggcggcatc
       61 atgggcgccg ccttcgtgcc ggtggcgctg ttgtggctgg tgctggcatg gctggaccgt
      121 ggccgccagg tgcgcgccgt cgccgacgag ctgacccagc acctgtcgcg cctgacctac
      181 ccggccgacg gcgccgaggc caaggtcaag gaagtgtccg aatcgctacg cggccaggcc
      241 cgcgccctga ccgaagcgtc gtcgcgcgcc gtggccgagg gtgaatcggt gcgcgccatg
      301 ctggcgaccc agatcgaggc gatgtcgagc gtggtcggcc gcatcaacgg cgacgcccgc
      361 gccgccgtcg aggccctgcg cggcgaggtc gatcgcctga gccaggccgc cgattccgcc
      421 accaaccggg cgcgcgagat cgagcatctg ctgcgcctgc agacccagga tttggccacc
      481 gtcaccgaca ccgccgccga caaggtgcgc gagttcggcg aatccatgcg cgagcacgtg
      541 gaagccatcg aggaaacctc gacccgcgcc gccagccgcg ccgaaagcct gtcgtcgcag
      601 atccagaagc acgccgaggc gttggacaag gtgtcgcggt cggccgtgga ccgcgccgag
      661 aacgtcgccc agatgttcgc cgacaacgcc ggcaagctgg ccgaagccgc cgagaaggcc
      721 ggcacccgca ccgaggacgt cgcccacacc ctgtcctcgc gcgtcgaatc gctggacaac
      781 ctgtttaccc gccagaacac cgacctggag aactcggccg aacgcctggc cgagaacacc
      841 aaccgcatca gcgcctcgct gcagcagcag gccaccagcc tggaccagac caccgaccgc
      901 gtgctgtcgc gcatcaagat cgtggaagag gccctgtcgg tccaatcgcg cgagctgaac
      961 tcggcctcgg accaggccat gacccgcttc cgcgagatgg aggaagtgct cggccgccat
     1021 gccgacgcgc tgaaggtcac cgccgacgac gcctcgggcc agttgggcgc ggtgggcgag
     1081 gtcttcaccc agcgccgcga cgacgtggac gcggcggtgg aaaaggccat ggcccgcatc
     1141 cgcgaggtcg ccgaggcctt ccagggccag acccgcggcc tgtcggcggc gtcggaccag
     1201 atgcaggtgc gcgcccgcga ggtttcggag acgctgcgcc tgcacatcga ggatctgggc
     1261 aagggcgccg acaaggcggc gtcgcaggcc gaggccatcc gccagacgct gcgcaagcag
     1321 gccgacgaac tggccgacgc cgccaacgtg gtgtcgaccc agtcgcgcct gtcggaagcg
     1381 tcgctgaacc agcagtcgcg ccacctgatc tcgacctcgg accaggtgat ggccaaggtc
     1441 aagaccatcg ccgacaccct gcgccagaac accaacgacc tgatcgccat gtccagccgc
     1501 gtcggcgtcg agctggaagc cgtgggcgag aacctgcgcc agcgcacctc cgaggtcggc
     1561 gtcgccgccg tcaaggccat cgacgagacc tcgtcggtcg ccgaaatcct cgacaagcgt
     1621 tcggagcaac tggcgaccgt cgccgagcag gtgtccagcc gcatccgcgt caccaccgac
     1681 gcgctgcgcc gtcagaccga acaactggtc gct
//
LOCUS       DATIKR010000614         5884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_142864, whole genome shotgun sequence.
ACCESSION   DATIKR010000614 DATIKR010000000
VERSION     DATIKR010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5884
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142864"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VLL76_09590"
     CDS             <1..855
                     /locus_tag="VLL76_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002966479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HSV29804.1"
                     /translation="KKQSDIVFAYDKGVRLYAFDSLCELEKLAESAPGSRVFCRILMT
                     CDGAEWPLSRKFGCEIEMAKDLLVKARELGLDPYGVSFHVGSQQTDLTQWDIALGKAA
                     MLFTALDEAGIELRMVNLGGGFPARYRSDVPAVERYADAVMDAMSKHFGNHLPAMIIE
                     PGRSLVGDAGILEAEVVLISQKSYDEDVRWVYLDIGKFGGLAETMDEAIKYRIETPRD
                     GDATGPVVLAGPTCDSADILYEKAGYEMPVTLKVGDKVRILSTGAYTTSYSAVNFNGF
                     APLKAYFI"
     gene            1443..2870
                     /locus_tag="VLL76_09595"
     CDS             1443..2870
                     /locus_tag="VLL76_09595"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HSV29805.1"
                     /translation="MLSETKAAPGGASGGLDIFTVRHTDRLHIQNQGAITATGLWSDL
                     AISGRGFFMVAPPNGTGAPTVGSTDDPNAVLYTRAGGFVQKAGADARNYFVNDSGHYL
                     LGWQADEYGNFDTGSLQPVYTEPQTVMAGRATTTAKIMASLPAHVPASGTYYEEAIDV
                     VDNAGNPQQVNFNWVRTGDNAYTVTANVVNAAAGAVSTTAPSVNTWAVTTDAYGNVTT
                     PTSFDFSIDWNLVAGGGSTAMTPAAGAVAPPRHVEKISLPVYDSALNAQTVTLAFERT
                     GTNTWNMHVGGGSGTTVPITFNGDGKIVSPQSTNLAVTFTDAGPPPTTTTGMVDLDLQ
                     SLSQYDSPQIYLGGVEQNGYGNGMMRVARFNAAGELEGSFDNGETRILFKVPVGTFIS
                     ENQLEAISGTMFRRTKDAGELTVTGVQEASGGSGYMSSSAVENSTVDIEDEFTRMIMT
                     QKAYSTNATVFKTADEMTTVARDLK"
     gene            complement(2889..3800)
                     /locus_tag="VLL76_09600"
     CDS             complement(2889..3800)
                     /locus_tag="VLL76_09600"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV29806.1"
                     /translation="MAQAYEHVRLVIADPNQLVRTGLRAALFSIGFRTIADTADFVRL
                     HDMLQNDEVDLLVASSELSDNDVGFLIQEMRNQRLGSNPFVLVIGLLANAEPDYVKRV
                     IDSGVDDLLLTPVVPDQLISRIEKLARTRKPFVVTHDYTGPDRRAKVRSFDSHSAPML
                     EVPNPLNARATGLETVKLMKQIRESGTTLNRIKIERHAVQIDWLVSHISASIRDGMGD
                     GPNLIPYTHRLVQVCEDMILRMKETAAEAFADPVRDLLAMAQALDEDTSKIAFPELEK
                     MLHQSRVIGRSLGNPTPAVATPVRMVG"
     gene            3974..4918
                     /locus_tag="VLL76_09605"
     CDS             3974..4918
                     /locus_tag="VLL76_09605"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HSV29807.1"
                     /translation="MTDARFNHRHLLGIQGLGPQEITTILDLADGYVDQNRSADKRKT
                     LLRGRTVTNLFFENSTRTRTSFELAAKRLGADVINMQVSASSVAKGETLIDTAMTLNA
                     MHLDVLVVRHGDSGAVQLLSEKVNCSVINAGDGSHEHPTQALLDALTIRRRKGRLAGL
                     TVAICGDVRHSRVARSNIYLLNAMGARVRVIGPRTLIPGQIDRMGVEVFHNMRDGLRD
                     VDVVMMLRIQNERMKGNFIPSIREYFHFFGLDYEKLALAKPDAVIMHPGPMNRGVEID
                     SDVADDVERSLIREQVEMGVAVRMACLDLLTRNLQGAQ"
     gene            4918..>5884
                     /locus_tag="VLL76_09610"
     CDS             4918..>5884
                     /locus_tag="VLL76_09610"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390939.1"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HSV29808.1"
                     /translation="MTGRPTDRKVAYVNARLLDPATGLDANGALLIEGETIADVGPAL
                     FQGGVPSGVEVVDCHGLCLAPGLVDMRVQVREPGEEHKETLKSAGESAVAGGVTSMVC
                     LPNTDPVIDDVASVEFVARRARKIGLAKVYPYAAATKNAEGKELSEMGMLYEAGALAF
                     TDGVHPIRNAQVMRRALTYAATYGALLVQHPEEPSLAEGGMMNEGEIATRLGLSGISP
                     MAEIIMLERDMRLVEATGGRYHAAHVSTGEGVEVIRRAKAKGLAVTCETAPPYFALNE
                     IAVGEYRTFAKLSPPLRSEADRQAIVAGLKDGTIDAIASDHCPQDQ"
BASE COUNT         1058 a         1959 c         1906 g          961 t
ORIGIN      
        1 aagaagcagt cggacatcgt cttcgcctat gacaagggcg tgcgcctgta cgccttcgac
       61 tcgctgtgcg agctggagaa gctggccgag tccgccccgg gttcgcgcgt gttctgccgc
      121 atcctgatga cctgcgacgg cgccgaatgg ccgctgtcgc gcaagttcgg ctgcgagatc
      181 gagatggcca aggacctgct ggtcaaggcc cgcgaactgg gcctcgaccc ctatggcgtg
      241 tcgttccacg tcggcagcca gcagaccgac ctgacccagt gggacatcgc gctcggcaag
      301 gccgccatgc tgttcactgc cctggacgag gccggcatcg agctacgcat ggtcaatctg
      361 ggcggcggct tcccggcccg ctaccgctcc gacgtgccgg cggtcgagcg ttacgccgac
      421 gcggtcatgg acgccatgag caagcatttc ggcaaccacc tgccggccat gatcatcgag
      481 ccgggccgct cgctggtggg cgacgccggc atcctcgagg ccgaggtcgt gctgatctcg
      541 cagaagtcct atgacgagga cgtgcgctgg gtctatctcg acatcggcaa gttcggcggc
      601 ctggccgaga ccatggacga ggccatcaag taccgcatcg agaccccgcg cgacggcgac
      661 gccaccggcc ccgtcgtgct ggccggcccg acctgcgatt ccgccgacat cctttacgag
      721 aaggccggct atgagatgcc ggtgaccctg aaggtgggcg acaaggtccg catcctgtcg
      781 accggcgcct acaccacctc gtactcggcg gtgaacttca acggcttcgc cccgctgaag
      841 gcctatttca tctgattttt gcacgcggac gaaaaagggc ggggagagat ccccgccctt
      901 ttttaatggt gggatttccc tcgcccgctt gcgggagagg gaggggcccg ttgcggagca
      961 atgggagggt gagggcctgg gtgcatgccg ggcggcacca gccctcacct ggttcgctgc
     1021 cgctcaccac ccttttgtca tcctgagcgc gagcgaagga tctttcactc gaagtggcta
     1081 ccgctcgtgc ctgaaagact cttcggctgc gcctcagagt gacaatcgct ctcccgcaag
     1141 cgggcgaggg tttgggcgtc gtcccggcaa aacctgccgc ccggcagcga ttgcggcagg
     1201 ttctgcccag cgcaacgcat ttaagccatt gaaaaacaac agccctcccc tggcacgctg
     1261 ttcgcatgga agcgagcgga agaataggca tgcgtgccac cggaggcgaa tatgctgtgg
     1321 ggtgctctta acaacgcgac gcaggcgatg atcgcgacga gctggcagat ggggtccatc
     1381 tcccagaaca tcgcgaacgt caacacggtc ggttacaaga acaaggagac cctgttcaag
     1441 acatgctgtc cgagacgaag gcggcaccgg gcggcgcgtc cgggggcttg gacatcttca
     1501 cggttcgcca taccgaccgc ctgcacatcc agaaccaggg cgccatcacg gcgaccggcc
     1561 tatggagcga cctggcgatc agcggccgcg gcttcttcat ggtggcgccg ccgaacggca
     1621 ccggggcgcc gacggtcggc tcgaccgacg atcccaacgc ggtgctgtac acccgcgccg
     1681 gcggcttcgt gcagaaggcc ggtgccgatg cccgcaacta cttcgtcaac gacagcggcc
     1741 attacctgtt gggctggcag gcggacgaat acggcaattt cgacaccggg tcgctgcagc
     1801 cggtctacac cgaaccgcag acggtgatgg ccggccgtgc caccaccacg gccaagatca
     1861 tggcgtcgct gccggcgcat gtgccagcca gcggcactta ttacgaagaa gcgatcgacg
     1921 tggtcgataa cgctggcaac ccgcagcagg tgaacttcaa ctgggtgcgc accggtgaca
     1981 atgcctatac cgtcaccgcc aatgtggtga acgccgcagc cggcgccgtc agcacgacgg
     2041 cgcccagcgt caacacttgg gcggtgacca ccgacgccta cggcaacgtc accacgccga
     2101 cctccttcga tttcagtatc gactggaacc tggtcgccgg cggcggctcg accgcgatga
     2161 cgccggccgc aggcgcggtg gcgccgccgc gccatgtgga aaagatcagc ctgccggtct
     2221 acgacagcgc gctgaacgcc cagaccgtga cgctggcctt cgagcgcacc ggcaccaaca
     2281 cctggaacat gcatgtcggc ggtggcagcg gcacgaccgt gccgatcacc ttcaacggcg
     2341 acggcaagat cgtgtcgccg caatcgacca atctggcggt gaccttcacc gacgccggac
     2401 cgccgccgac caccaccacc ggcatggtgg acctcgacct gcagtcgctc agccaatacg
     2461 actcgccgca gatctatctc ggtggcgtcg agcagaatgg ctatggcaac ggcatgatgc
     2521 gggtggcgcg gttcaacgcg gcgggcgaac tggaggggtc gttcgacaac ggcgagaccc
     2581 gtatcctgtt caaggtcccg gtcggcacct tcatatccga aaaccagttg gaagccatat
     2641 cgggcaccat gttccggcgc accaaggatg ccggcgagct gacggtgacc ggggtgcagg
     2701 aggcgtcggg cggcagcggc tacatgtcgt cgagcgcggt cgagaactcg accgtcgaca
     2761 tcgaggacga gttcacccgc atgatcatga cccagaaggc ctattccacc aacgcgacgg
     2821 tgttcaagac cgccgacgag atgaccacgg tggcgcggga cctcaagtaa ttccttgggg
     2881 ttccgccgtc accccaccat gcgcacgggc gtcgccacgg ccggggtggg attgcccagc
     2941 gagcggccga tgacgcgcga ctggtgcagc atcttttcca gctcggggaa ggcgatcttc
     3001 gaggtgtcct cgtccagggc ttgggccatg gccagcaggt cgcgcaccgg atcggcgaag
     3061 gcttcggccg ccgtttcctt catgcgcagg atcatgtcct cgcacacctg caccaggcgg
     3121 tgggtataag ggatcaggtt ggggccgtcg cccatgccgt cgcggatgga cgcgctgata
     3181 tggctgacca gccagtcgat ctgcaccgcg tggcgctcga tcttgatgcg gttcagcgtc
     3241 gtgccggatt cccggatctg cttcatcagc ttgaccgtct caaggccggt ggcgcgggcg
     3301 ttgagcgggt tgggaacctc gagcatgggg gccgagtggc tgtcgaagct gcgcaccttg
     3361 gcgcggcggt cggggccggt gtagtcgtgg gtgacgacga acggcttgcg ggtgcgggcc
     3421 agcttctcga tgcggctgat caactggtcg ggcaccaccg gggtcagcag caggtcgtcg
     3481 acgccggaat cgatcacgcg cttgacgtag tccggttctg cgttcgccaa caggccgatc
     3541 accagcacga acggattgct gcccaggcgc tggttgcgca tttcctggat caggaagccg
     3601 acgtcgttgt cgctcaattc gctggacgcc accagcaggt cgacctcgtc gttctgcagc
     3661 atgtcgtgca gccgcacgaa gtccgccgtg tcggcaatgg tgcggaaacc gatggaaaac
     3721 agggctgcgc gcaggccggt gcgaaccaac tggttggggt cggcgatgac caaacgaacg
     3781 tgctcgtatg cttgtgccac gttacccctt ccccacctgg gtgccgttta aaacccgttt
     3841 aaattcaatg gctagccatc aaacatacaa aacctatagc cattttcgta tgaggtcatc
     3901 acctgattcg tgcatggtcg catgcgccac ccgcttgcgg cctatcaggg gcacgcatat
     3961 agttcgcccc accatgacag acgcgcgctt caaccatcgt cacctcctcg gcatccaggg
     4021 gctggggccg caggaaatca ccaccatcct cgacctggcc gacggctacg tcgaccagaa
     4081 ccgctcggcc gacaagcgca agaccctgct gcgcggccgc acggtgacga acctgttctt
     4141 cgagaattcg acccgcaccc ggacatcgtt cgaactggcc gccaagcggc tgggcgccga
     4201 cgtcatcaac atgcaggtgt cggcctcgtc ggtcgccaag ggcgagaccc tgatcgacac
     4261 cgccatgacg ctgaacgcca tgcatctgga cgtgctggtg gtccgccacg gcgattcggg
     4321 cgcggtgcaa ttgctgtcgg aaaaggtcaa ttgctcggtg atcaacgccg gcgacggcag
     4381 ccacgagcac ccgacccagg cgctgctcga cgcgctgaca atccgccgcc gcaagggccg
     4441 gctggccggc ctgacggtgg cgatctgcgg cgacgtgcgg cattcgcggg tggcgcggtc
     4501 caacatctat ctgctcaacg ccatgggcgc gcgcgtccgc gtcatcggcc ccaggacgct
     4561 gatccccggc cagatcgacc gcatgggcgt cgaggtgttc cacaacatgc gcgacggcct
     4621 tagggacgtg gacgtggtga tgatgctgcg catccagaac gagcgcatga agggcaactt
     4681 catcccctcg atccgcgagt atttccactt cttcggcctg gattacgaaa agctggcgct
     4741 ggccaagccc gacgccgtca tcatgcatcc tggcccgatg aatcgcggcg tcgagatcga
     4801 ttccgacgtg gccgacgacg tcgaacgctc gctgatccgc gagcaggtgg aaatgggcgt
     4861 ggcggtgcgc atggcctgcc tcgacctgtt gacccgcaac ctgcaggggg cgcagtgatg
     4921 accggccgtc cgaccgaccg caaggtcgcc tacgtcaacg cccgcctgct cgaccccgcc
     4981 accggcctcg acgccaacgg cgcgctgctg atcgagggcg agaccatcgc cgatgtcggc
     5041 ccggccctgt tccagggcgg cgtgccgtcg ggcgtcgagg tggtggattg ccatggcctg
     5101 tgcctggccc ccggcctggt ggacatgcgc gtccaggtgc gcgagcccgg cgaagagcac
     5161 aaggagacgc tgaaatcggc cggtgaatcg gcggtggccg gcggcgtgac ctcgatggtc
     5221 tgcctgccca acaccgatcc ggtgatcgac gacgtcgcct cggtggaatt cgtcgcccgc
     5281 cgcgcccgca agatcggcct cgccaaggtc tatccctacg ccgcagccac caagaacgcc
     5341 gagggcaagg aactctcgga gatgggcatg ctgtacgagg ccggcgcgct ggccttcacc
     5401 gacggcgtcc accccatccg caacgcccag gtgatgcgcc gggcgctgac ctatgccgcc
     5461 acctacggcg ccctgctggt gcagcacccg gaggagccga gcctcgccga gggcggcatg
     5521 atgaacgaag gcgagatcgc cacccgcctg ggcttgtcgg gcatctcgcc catggcagag
     5581 atcatcatgc tggaacgcga catgcgcctg gtcgaggcca ccggcggccg ctatcacgcc
     5641 gcccacgtct cgaccggcga gggcgtcgag gtcatccgcc gcgccaaggc caagggcctg
     5701 gccgtcacct gcgagacggc gccgccctat ttcgcgttga acgagatcgc cgtcggcgag
     5761 taccgcacct tcgccaagct gtcgccgccg ctgcgttccg aggccgaccg ccaggccatc
     5821 gtcgccggcc tcaaggacgg caccatcgac gccatcgcgt ccgaccattg cccgcaggac
     5881 cagg
//
LOCUS       DATIKR010000615         2528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_57271, whole genome shotgun sequence.
ACCESSION   DATIKR010000615 DATIKR010000000
VERSION     DATIKR010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57271"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VLL76_09615"
     CDS             <1..218
                     /locus_tag="VLL76_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isoprenoid biosynthesis protein ElbB"
                     /protein_id="HSV29809.1"
                     /translation="GGVELTIGSDAGTAAALEQLGARHRNTGHAEVVVDRIHKVVTTP
                     CYMLDARISQVADGADAAVRALIELVR"
     gene            295..480
                     /locus_tag="VLL76_09620"
     CDS             295..480
                     /locus_tag="VLL76_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29810.1"
                     /translation="MGEKVKPTKTDPRDPGKKVPQYQSTAADDEIDQSSEDSFPASDP
                     PSYTPVHPGNPEHEKDK"
     gene            complement(589..1056)
                     /locus_tag="VLL76_09625"
     CDS             complement(589..1056)
                     /locus_tag="VLL76_09625"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HSV29811.1"
                     /translation="MKRLAVILPLLLAACAGSDDISSSQPVGFVKDARQVVDQADWSN
                     PQVVEIDMANYEFRPDEFTVRRGKPVKLVLRNVSTKDHTFVSKPFFKGIAVKQVVSNQ
                     GAVAGPYVEKIVVEENATKEVWFVPTRYGAYQFECDVTGHALLGMKGVVNVVE"
     gene            complement(1053..1478)
                     /locus_tag="VLL76_09630"
     CDS             complement(1053..1478)
                     /locus_tag="VLL76_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV29812.1"
                     /translation="MSDAAAIIARLGLQPHPEGGHYVETYRDRPEGGERGAATAIYYL
                     LRAGERSHWHRIDATEIWHWHAGGPLRLRISDDGKSVREIVLGGDVLAGQVPQAVVPP
                     HSWQAAVPMGDWVLVGCTVAPAFEFAGFEMAPEGWEPEQ"
     gene            complement(1475..2077)
                     /locus_tag="VLL76_09635"
     CDS             complement(1475..2077)
                     /locus_tag="VLL76_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014778370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HSV29813.1"
                     /translation="MKLRYSPTSPFVRKVLMVAHEAGLAGRIAMETTNAWDTATDLTR
                     DNPLCKVPALVTDGGESLFDSPVICEYLDSLHDGRKLFPATGGERWAQLRLQALADGI
                     LDAAVQIRIETAIRPAEFRWDGWQERQAGAINRGLDVLEQECGAWGDDFLIGQITTLA
                     ALEYLDFRGAVGEWRGSRPALAAWAARMGQRPSAVATAIK"
     gene            complement(2172..>2528)
                     /locus_tag="VLL76_09640"
     CDS             complement(2172..>2528)
                     /locus_tag="VLL76_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase C-terminal
                     domain-containing protein"
                     /protein_id="HSV29814.1"
                     /translation="GCGRNFEGTLAQLHHSLQRLAALPDDTQVYCAHEYTASNGRFAR
                     LLDRDNPALTAKIDKAARLVAAGKPSLPSTIGEERAANPFLRCDVPAIARAVGLEAGT
                     DPVAVFAELRRRKDVF"
BASE COUNT          431 a          858 c          855 g          384 t
ORIGIN      
        1 tgggcggggt cgaactgacc atcgggtccg acgccggcac cgccgccgcg ctggagcaac
       61 tgggcgcgcg ccaccgcaac accggccatg ccgaggtggt ggtggaccgc atccacaagg
      121 tggtcaccac gccgtgctac atgctcgacg cccgcatctc gcaggtcgcc gacggtgccg
      181 acgccgccgt gcgggcgctg atcgaattgg tgcgctgacg ctctcccatc ggcccaatgg
      241 cggccattcg cagtgccccc catgtagcgg gggcacaacg aaaggaatgc gcccatgggc
      301 gaaaaggtga agccgaccaa gaccgacccg cgcgatccgg gcaagaaggt gccgcaatac
      361 cagagcaccg ccgccgacga cgaaatcgac cagtcgagcg aggattcgtt ccccgccagc
      421 gacccgccgt cttatacccc agtccacccc ggcaatccgg agcacgagaa ggacaaatga
      481 cctgtcggag cctgaaagat gcttcgctgt gctcagcatg acaaaccagt ctgtcatcct
      541 gagccgcagg cgaaggatct ttcacccgag atgttcgcgg tggggccgtc actcgaccac
      601 gttgacgacg cccttcatgc ccagcaaggc gtggccggtg acgtcgcatt cgaactgata
      661 ggcgccatag cgggtgggca cgaaccacac ctccttggtg gcgttctcct cgaccacgat
      721 cttctccaca tagggaccgg cgacggcgcc ctggttcgac accacctgct tgaccgcgat
      781 gcccttgaag aacggcttgg acacgaaggt gtgatccttg gtcgaaacgt tgcgcagcac
      841 cagcttcacc ggcttgccgc gccgcacggt gaactcgtcg gggcggaact cgtaattcgc
      901 catgtcgatc tcgaccacct ggggattgga ccagtcggct tggtccacca cctggcgggc
      961 atccttgacg aagcccaccg gctgggacga gctgatgtcg tccgagccgg cgcaggcggc
     1021 cagcagcagg ggcaggatca cggcaagacg cttcattgtt caggctccca tccttccggc
     1081 gccatctcga agccggcgaa ttcgaacgcg ggtgcgacgg tgcagccgac cagcacccaa
     1141 tctcccatcg gcacggcggc ctgccaggaa tggggcggca ccaccgcctg cggcacctgg
     1201 ccggccagca cgtcgccacc aagcacgatc tcgcgcacgg acttgccgtc gtcgctgatc
     1261 cgtagcctca gcggaccgcc ggcatgccag tgccagatct cggtggcgtc gatacgatgc
     1321 cagtgcgagc gctcgcccgc ccgaagcaaa taatagatcg ccgtcgcggc accgcgctcc
     1381 ccgccttccg gccggtcgcg atatgtctcg acgtagtggc cgccctcggg atggggctgc
     1441 aggccaaggc gggcgatgat ggcggcggcg tcgctcactt gatcgccgtc gccaccgccg
     1501 acggacgctg gcccatgcgg gcggcccagg cggccagggc cgggcggctg ccgcgccatt
     1561 ccccgacggc gccccggaag tccaggtatt ccagcgcggc cagggtggtg atctggccga
     1621 tcaggaagtc gtcgccccag gcgccgcatt cctgctccag cacgtcgagg ccacggttga
     1681 tggcgccggc ctggcgctcc tgccagccgt cccagcggaa ctcggcgggg cggatggcgg
     1741 tctcgatgcg gatctgcacg gcggcgtcga ggatgccgtc ggccagcgcc tgcagccgca
     1801 actgcgccca gcgctcgccg cccgtggcgg ggaacagctt gcggccgtca tgcagcgaat
     1861 ccaggtactc gcagatcacc ggcgagtcga acaggctctc gccgccgtcc gtcaccagcg
     1921 ccggcacctt gcacagcggg ttgtcgcggg tcaggtcggt ggcggtgtcc caggcgttgg
     1981 tggtctccat cgcgatccgc ccggccaacc cagcctcgtg ggcgaccatc aggaccttgc
     2041 ggacgaaggg cgaggtgggg gaatagcgga gcttcatgga cggacctcgg cgagggcttg
     2101 agacacggat ggacacagat taacacggat gggcgaattg aaatccgcgt tcatccgtgt
     2161 ccatccgtgt ctcaaaacac atccttccgc cgccgcaatt ccgcgaacac cgccaccggg
     2221 tcggtgcccg cctcaaggcc gacggcgcgg gcgatggcgg ggacgtcgca gcgcaggaag
     2281 gggttggcgg cgcgttcctc gccgatggtg gatggcagcg acggcttgcc ggcggcgacc
     2341 aggcgggcgg ccttgtcgat cttcgccgtc agcgccgggt tgtcgcggtc cagcaggcgg
     2401 gcgaagcggc cgttcgaggc ggtgtattcg tgggcgcaat agacctgagt gtcgtcgggc
     2461 agggcggcca ggcgttgcag ggagtggtgc aattgggcga gcgttccctc gaaattgcgg
     2521 ccgcaacc
//
LOCUS       DATIKR010000616         3385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_239109, whole genome shotgun sequence.
ACCESSION   DATIKR010000616 DATIKR010000000
VERSION     DATIKR010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3385
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239109"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..155
                     /locus_tag="VLL76_09645"
     CDS             <1..155
                     /locus_tag="VLL76_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSV29815.1"
                     /translation="MPREAGMRLLQPPFQPSTYELQENGRSFPPNYLHQSWRDFLYWD
                     SELDQF"
     gene            complement(160..1059)
                     /locus_tag="VLL76_09650"
     CDS             complement(160..1059)
                     /locus_tag="VLL76_09650"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29816.1"
                     /translation="MTETKTDIQAFWKSLYDSLYEDVDQGLTRDALMGALDDLEDMFR
                     LRRHMAVVEMPLADLKGKRVLEVGPGAGGHSALFAKHGAVMTSVDLTFARARATNAKY
                     ALMGEAAQGCAALQGDAENLPFADATFDIVYSNGVLHHTLDTEKAIAEVHRVLKPGGQ
                     AVILLYCKSSWHYWINMFLPVGVLQGKLFADRNWLGKATEWGGKNRQTVANPITRCYT
                     RSGIETLFSAFRDVAMRKGEFYWYLVPKLGRLYRKYQIKKYGTHPGGVLVYGEPWPIQ
                     SPMELKLGELMGFAWYISARKPG"
     gene            1107..2795
                     /locus_tag="VLL76_09655"
     CDS             1107..2795
                     /locus_tag="VLL76_09655"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HSV29817.1"
                     /translation="MLDAILRKGRQLAEDPVLRRWLLARALGRTPAEPAFTAHRPPYL
                     GDGWSGLPLEHPQASLPVLPAGRPTGSLALTLAGARPTIAPGGEPALVRQRFADLETE
                     LSLHRFAWVPLMDADADPRWVGTVWQAWCDAHGNPDQSWAWHPYTAAERAVNLLTFAA
                     RHGLPEGAETVLAAHAPAIARGLEWFGDHHTSNHCANNGRGLYLLGLALGLKQATEAG
                     ARILLEEGRSIFRPSGVLREASTHYHLLLTRQWASVWLAARRHARPEAAEFGATLRAA
                     LAVLPLFDLPGRFPLVGDVSPDCPPDHLFGLLPGRPAQGWTALLDDADRAALLALAGD
                     AAPSAEGWLRADHGPWSGLWHAEPEGWSPMPGHGHQDCGGAEIHFGGVPVFIDPGRGS
                     YARAGEADPFVAGGSHGVLAVDGLDPYPQNRPYYDPAFRMAMAGPALLAPTESGVRLV
                     HHGYARIGLGAVERSWSFAPDRLVIDDWVQGNGRHRVERRLVTGLDARLADDVAILTA
                     ADGRRFRLGAEDCACTLAPTVAWAAYGEGRPAQVVTFSADIRLPWRGRITVEVL"
     gene            2795..>3385
                     /locus_tag="VLL76_09660"
     CDS             2795..>3385
                     /locus_tag="VLL76_09660"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29818.1"
                     /translation="MCGLAGLFLPKGAPAVTADLEAMLAAIRHRGPDGFGRFVSPDGR
                     FQAGFARLAIIDLATGDQPLVEPGGGRVFLGNGEIYNYRELRAELEGRGHVFSTSGDM
                     EPALKLLAEKGLDFVHDLNGMYGLAVWERDAGRLVLVRDRLGIKPVYWSRLPGGGIIF
                     ASEIKVLFASGLVAAEVDEAMVTPWLAHGYVPAPTTL"
BASE COUNT          454 a         1205 c         1159 g          567 t
ORIGIN      
        1 agatgccgcg cgaggccggc atgcggctgc tgcagccgcc gttccagccc tcgacctacg
       61 aattgcagga aaacggccgc tcgttcccgc ccaactacct gcaccaatcc tggcgcgact
      121 tcctgtattg ggattccgag ctggaccagt tctgatcctt cagcccggct tcctggccga
      181 gatgtaccag gcgaagccca tcaattcgcc cagcttcagc tccatgggcg actggatcgg
      241 ccacggctcg ccatagacca gcacgccgcc gggatgggtg ccgtatttct tgatctggta
      301 cttgcggtac agccggccca gcttgggcac caggtaccaa tagaactcac ccttgcgcat
      361 ggcgacgtcg cggaacgccg agaacaacgt ctcgataccg gaacgggtgt agcagcgggt
      421 gatcgggttg gcgacggtct ggcggttctt gccgccccat tcggtggcct tgcccagcca
      481 gttgcggtcg gcgaacagct tgccctgcag cacgcccacc ggcaggaaca tgttgatcca
      541 gtaatgccac gagctcttgc aatagagcag gatcaccgcc tggccgccgg gcttgagcac
      601 gcggtggacc tcggcgatgg ccttttcggt gtccagtgtg tggtgcagca cgccgttgga
      661 atagacgatg tcgaaggttg cgtcggcgaa gggcaggttc tcggcgtcgc cctgcagcgc
      721 ggcgcagcct tgggccgcct cgcccatcag ggcgtatttg gcgttggtgg cgcgggcgcg
      781 ggcgaaggtc aggtcgaccg aggtcatcac cgcgccatgc ttggcgaaca gcgccgaatg
      841 gccgccggcg ccgggaccga cttccagcac ccgcttgccc ttgaggtcgg ccagcggcat
      901 ctcgaccacg gccatgtggc ggcgcaggcg gaacatgtcc tcgaggtcgt cgagcgcgcc
      961 catcagcgcg tcgcgggtca ggccctggtc cacgtcctcg tagagcgaat cgtagaggga
     1021 cttccagaag gcctggatat cggtcttggt ctcggtcatc agtcctctat agccttggac
     1081 agggttaacc gctacaagct tttgccatgc tcgacgccat tctccgcaag ggccgccagc
     1141 tcgccgagga tccggtgctt cgccggtggc tgctggcgcg cgccctcggg cgcacgcccg
     1201 ccgagccggc cttcaccgcc caccgcccgc cctatctggg cgacggctgg tccggtctgc
     1261 cgctggagca cccgcaagcc tcgctgccgg tcctgccggc cggccggccc accggcagcc
     1321 tggccctgac cttggccggt gcccgcccga ccatcgcgcc gggaggtgaa ccggcgctgg
     1381 tgcggcagcg tttcgccgac ctcgagaccg agctgtcgct gcaccgcttc gcctgggtgc
     1441 cgctgatgga tgccgacgcc gacccccggt gggtggggac ggtgtggcag gcctggtgcg
     1501 acgcccacgg caatcccgac caatcctggg cctggcatcc ctataccgcc gccgagcggg
     1561 cggtgaacct gctgaccttc gccgcccgcc acggcctgcc cgagggcgcc gagaccgtgc
     1621 tggccgccca tgccccggcc atcgcgcgcg gcctggaatg gttcggcgac caccacacat
     1681 cgaaccattg cgccaacaac ggccgcggcc tctatctgct ggggctggcg ctgggcctca
     1741 agcaggccac cgaggccggc gcccgcatcc tgttggagga aggccgcagc atcttccgtc
     1801 cgtcgggcgt gctgcgcgag gcctcgaccc attaccacct gctgctgacc cggcaatggg
     1861 ccagcgtgtg gctggcggcc cgccgtcacg cccggcccga ggcggccgaa ttcggggcga
     1921 ccctgcgcgc cgccctcgcc gtgctgccgc ttttcgacct gcctggacgc tttccgctgg
     1981 tcggcgacgt gtcgcccgat tgcccgcccg accatctgtt cggcctgttg cccggccgcc
     2041 cggcccaggg ctggaccgcc ctgctggacg acgccgaccg cgccgccctg ctggccctgg
     2101 cgggagatgc cgccccgtcc gccgagggct ggctgcgggc cgatcatggc ccctggtcgg
     2161 gcctgtggca tgccgaaccc gagggttggt cgcccatgcc cggccacggc caccaggatt
     2221 gcggcggcgc cgaaatccat ttcggtggcg tgccggtttt catcgacccc ggccgggggt
     2281 cctatgcccg ggcgggcgag gccgatccgt tcgtggccgg cggcagccac ggcgtgctgg
     2341 cggtggacgg cctcgacccc tatccccaga accggcccta ttacgacccg gccttccgca
     2401 tggcgatggc cggcccggcc ttgttggcac cgaccgagtc cggcgtgcgg ctggtccatc
     2461 acggctatgc ccgcatcggc ctgggggcgg tggagcggag ctggagcttc gcgcccgacc
     2521 ggctggtgat cgacgattgg gttcagggga acggccggca tcgggtggaa cgccggttgg
     2581 tgaccggcct ggacgcccgc ctggccgacg acgtggcgat cctgaccgcc gccgacggcc
     2641 gccgcttccg cctgggagcc gaggattgcg cctgcaccct ggcgcccacc gtggcgtggg
     2701 ccgcctatgg cgaaggccgg cccgcccaag tggtgacctt ttccgccgac atccgcctgc
     2761 cgtggcgcgg ccgcatcacc gtcgaggtgc tgtgatgtgc ggcctggccg gtctgttcct
     2821 gcccaagggg gcgcccgccg tcacggccga tttggaggcc atgctggccg ccatccgcca
     2881 tcgcggtccc gacggcttcg gccgcttcgt cagtcccgac gggcgcttcc aggcggggtt
     2941 cgcgcggctt gccatcatcg atttggccac cggcgaccag cctctggtgg agccgggcgg
     3001 cggccgcgtc ttcctgggca atggcgagat ctacaattac cgcgaattgc gggccgagct
     3061 ggaagggcgc ggccacgtct tttccacctc aggcgacatg gagcctgcgc tcaaactgtt
     3121 ggctgaaaag ggcctggact tcgttcacga cctcaacggc atgtacggcc tggcggtgtg
     3181 ggagcgcgat gccggccggc tggtgctggt gcgcgaccgc ctgggcatca agccggtcta
     3241 ttggagccgc ctgcccggcg gcggcatcat tttcgcatcc gaaataaaag tgctgttcgc
     3301 ctcggggctg gtggccgccg aggtcgacga ggccatggtg acgccgtggc tggcccatgg
     3361 ctacgtgccg gcccccacca ccctg
//
LOCUS       DATIKR010000617         3035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_142929, whole genome shotgun sequence.
ACCESSION   DATIKR010000617 DATIKR010000000
VERSION     DATIKR010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142929"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1403
                     /locus_tag="VLL76_09665"
     CDS             <1..1403
                     /locus_tag="VLL76_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSV29819.1"
                     /translation="PSPMADFGYDVADYVDIDPLFGTLADFDALLAEAHQRGIRVLLD
                     FVPNHSSDRHPWFLASRSGRESLRRDWYIWHDPAPGGGPPNNWLGVFGGSAWTLDDAT
                     GQYYYHAFLPQQPDLNWRNPEVRVAMAEALRFWLDRCVDGFRVDVIWHLIKDDRFRDN
                     PVNPDWPPGGDPYAALCPLYTTDRPEVHEVIRDLRGLMDGYPDRVLIGEIYLPVERLV
                     AYYGVDLDGVHLPFNFQLLQAPWHARELDQLIREYEALLPQGGWPNWVLSNHDRPRIA
                     SRVGLAQARVAAMLLLTLRGTPTLYYGDEIGMEDVAAARGRDPAGRDPCRTPMQWDAS
                     PCAGFTAGTPWLPLAANWSEVNVATQVADPRSMLNLHRRLIGLRRQEPALSLGAYTPI
                     EAEGDLLAYVRRADGADDMLVVLNLGSEPRSLELPLDIGGSLALSTHLDRDGEAISRH
                     IALRADEGVIVRTPRR"
     gene            complement(1412..2290)
                     /locus_tag="VLL76_09670"
     CDS             complement(1412..2290)
                     /locus_tag="VLL76_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HSV29820.1"
                     /translation="MADKSYTPLAHRALLVVGGDDRRAFLQGLISNDTNKLAADRAIF
                     GAFLTPQGKFLHDLFLAERGDEFLIEAEADRIEDFRKKLSMYKLRSKVTVAMAEGLSV
                     FAAFGDGAASALDLPAEAGAARRIGDGVAFVDPRLAAAGLRAWLPDASALSGFAEAPF
                     AAWDQMRMELGLPDGSRDLPVEKAILLENGFDELNGVDFQKGCYMGQELTARTKHRGL
                     VRKRLMPVRIDGPVPEPGTPVIHGDAEAGEMRSVSGSVGLALIRLEHFRAGGPFTCGA
                     ATVTPSKPDWAVFPEE"
     gene            2401..>3035
                     /locus_tag="VLL76_09675"
     CDS             2401..>3035
                     /locus_tag="VLL76_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSV29821.1"
                     /translation="MHITLVDDSIPYDGYSASSRPLGGAEKAFSSLPGALSRRGHTVA
                     VFNRCRWSMFIEGAQWETFDGKKPLHTDLLIAFRKPQLLEFMRTARRRVLWHTGPGRM
                     LDKKATRALLDEHKPLILLVSEHQATEFSAKGLAVGLMPPAVRFDFLADKAMEPTTPP
                     RAIVTTHPLHGLSWLVDLWTAKIRPAVPDAEMHVFSMGLAKAAEGGGLEPGL"
BASE COUNT          467 a         1088 c         1016 g          464 t
ORIGIN      
        1 atccctcgcc catggccgat ttcggctatg acgtcgccga ctacgtcgat atcgatccgc
       61 tgttcggcac cttggccgat ttcgacgccc tgctggccga ggcccaccag cgcggcatcc
      121 gggtgctgct ggacttcgtg cccaaccaca gctcggaccg ccatccgtgg ttcctggcct
      181 cgcggtcggg gcgcgagtcg ctcaggcgcg attggtacat ctggcacgac ccggcgcccg
      241 gcggcggccc gcccaacaac tggctcggcg tgttcggcgg cagcgcctgg accctggacg
      301 acgccaccgg gcaatattac taccacgcct tcctgccgca gcagcccgac ctcaactggc
      361 gcaaccccga agtccgcgtc gccatggccg aggcgctgcg cttctggctg gatcgttgcg
      421 tcgacggctt ccgggtcgac gtcatctggc acctgatcaa ggacgaccgc ttccgcgaca
      481 acccggtcaa ccccgactgg ccgcccggcg gcgaccccta tgccgcgctg tgcccgctct
      541 acaccaccga ccgccccgag gtgcacgagg tcatccgcga cctgcgcggg ctgatggacg
      601 gctatcccga ccgcgtgctg atcggcgaga tctatctgcc ggtcgagcgg ctggtggcct
      661 attacggggt ggacctggac ggcgtccatc tgcctttcaa tttccaactg ctgcaagcgc
      721 cgtggcacgc ccgcgaactg gaccagttga tccgcgaata cgaggcgctg ctgccccagg
      781 gcggctggcc caattgggtg ctgtccaacc acgaccggcc gcgcatcgcc agccgggtcg
      841 ggctggccca ggcgcgcgtc gccgccatgc tgctgctgac gctgcgcggc acccccactt
      901 tgtattacgg cgacgagatc gggatggagg acgtggcggc ggcgcgcggc cgcgaccccg
      961 ccggccgcga cccctgccgc acgcccatgc aatgggatgc ctcgccctgc gcgggcttca
     1021 ccgccggcac accctggctg cccttggccg ccaactggtc cgaggtcaac gtcgccaccc
     1081 aggtggccga tccccgctcg atgctgaacc tgcaccgccg cctgatcggg ctgcgacggc
     1141 aggaaccggc gttgtcgctg ggggcctaca cccccatcga ggcggaaggc gacctgctgg
     1201 cctatgtccg ccgcgccgac ggcgccgacg acatgctggt ggtgctgaac ctgggaagcg
     1261 aaccgcgcag cctggaactg ccgctggaca tcggcggcag cctggccctt tcgacccacc
     1321 ttgaccgcga tggcgaggcc atcagccgcc acatcgccct gcgcgccgac gaaggcgtca
     1381 tcgtccgcac gccgcgacgg tgaatgggga ctcactcctc gggaaacacc gcccaatccg
     1441 gcttcgacgg cgtcacagtc gccgcgccgc aggtgaacgg accgccggcg cggaagtgtt
     1501 cgaggcggat cagcgccaag cccaccgagc cggaaacgct gcgcatctcc ccggcctcgg
     1561 catcgccatg tatcaccggg gtgccgggct cgggcacggg gccgtcgatg cgcaccggca
     1621 tcaggcgctt gcgcaccagg ccgcgatgct tggtgcgcgc ggtcagttcc tggcccatgt
     1681 agcagccctt ctggaagtcg acgccgttca gttcatcgaa gccgttttcc agcaggatgg
     1741 ccttttccac cggcaggtcg cggctgccgt cgggcaagcc cagctccatg cgcatctggt
     1801 cccaggcggc gaagggcgct tcggcgaagc cggacagggc cgaggcatcg ggcagccagg
     1861 cgcgcaggcc ggccgccgcc aggcgcggat cgacaaaggc cacgccgtcg ccgatgcggc
     1921 gggcggcacc ggcctcggcc ggcagatcca gcgccgacgc ggcgccgtca ccgaaggcgg
     1981 cgaacaccga caatccctcg gccatggcga cggtgacctt ggagcgcagc ttgtacatgg
     2041 acagcttctt gcggaaatcc tcgatccggt cggcttcggc ctcgatcagg aattcgtcgc
     2101 cgcgctcggc caggaacagg tcgtgcagga acttgccctg gggcgtcagg aaggcgccga
     2161 agatggcgcg gtcggcggcc agcttgttgg tgtcgttgga tatcagaccc tgcaggaagg
     2221 cgcggcggtc gtcgccgccc accaccaaaa gggcgcggtg cgccagcggg gtatagctct
     2281 tgtcggccat gtcgggtctc cgttgggggc ggacggaacc gcaaaaaggt ggggcaaagc
     2341 ggacggcttg gcaagggcca ccgcttggca gggccgacgg gggcacgtat aactgagccg
     2401 atgcacatca ctcttgttga cgattccatc ccctatgacg gctattcggc gtccagccgc
     2461 cccttgggcg gcgccgaaaa ggcgttctcg tccctgcccg gcgcgctgtc gcggcgcggc
     2521 cacacggtgg cggtgttcaa ccgctgccgc tggagcatgt tcatcgaggg cgcccagtgg
     2581 gagaccttcg acggcaagaa gccgctgcat accgatctgc tgatcgcctt ccgcaagccg
     2641 caattgctgg aattcatgcg caccgcgcgg cgccgcgtgc tgtggcatac cggccccggc
     2701 cgcatgctcg acaagaaggc gacccgcgcc ctgctggacg aacacaagcc actgatcctg
     2761 ctggtgtcgg agcaccaggc gaccgagttc agcgccaagg gcctggccgt cggcctgatg
     2821 ccgccggcgg tgcggttcga cttcctggcc gacaaggcga tggaaccgac caccccgccg
     2881 cgcgccatcg tcaccaccca tccgctgcac ggcctgtcct ggctggtgga tctgtggacc
     2941 gccaagatcc gcccggccgt gcccgacgcc gagatgcacg tcttctcgat ggggcttgcc
     3001 aaggcggccg agggcggcgg gttggaaccc ggcct
//
LOCUS       DATIKR010000618         5293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_21203, whole genome shotgun sequence.
ACCESSION   DATIKR010000618 DATIKR010000000
VERSION     DATIKR010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5293
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21203"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /locus_tag="VLL76_09680"
     CDS             <1..538
                     /locus_tag="VLL76_09680"
                     /inference="COORDINATES: protein motif:HMM:NF024584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HSV29822.1"
                     /translation="VLNADRLTRLFEAGLSTLLISVYDSKEDADRLGALCADAGLRPD
                     QYVIRHRYLPPEEDFGITLSNRAGMMDAAEFKLPTPAEPLTAPCYYPHYTFFMDYLGD
                     VLLCPHDWGKKRVVGNLRDQDFLDIWTGEAFSAARRRLAAGDRAFAPCGGCDVKGALM
                     GAKHSQLWVQLEAAKRGG"
     gene            538..1248
                     /locus_tag="VLL76_09685"
     CDS             538..1248
                     /locus_tag="VLL76_09685"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29823.1"
                     /translation="MRQVLVTGASSDIGLAVCRRFLDDDCRVVAHYRTPRPELAALEA
                     ERGVVPLALDLSDPEALEDGLARNRDLITRSDVLVHCVGMLQSAPFAQVTARQLVDHF
                     TVNTVSALALMRDVAPAMVQRGWGRIVLLSSIGVKFGGGSGSFAYALSKQALEYLPAD
                     HRAWAAANVLVNVVRVGLTDTRIHRQDPTKDMSRRVALVPCGRMAAPDEIAATVHWLG
                     SDLNTFTTGQTIGVAGGE"
     gene            1250..3058
                     /locus_tag="VLL76_09690"
     CDS             1250..3058
                     /locus_tag="VLL76_09690"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29824.1"
                     /translation="MGSGLIAKLLALPDRRGRRRIFALLPVMLTASLLELGGFGLLVS
                     LLNALLGAAPLEAGVMRWATGWIKDVDSWTFAIGVVMFFALKNLALLGLGYLTSRVAF
                     DSLADFLRRLYGHYLRQPYVTHLGRNSAEMLNHLASSAPIAFDSLRILLEIVLEAVLS
                     LATLALLLSVQPELTVAGMVGLFVVGFLFHKLTSPVFRRWGAEAYGHELQAMTLAKES
                     FGAIKEILVSGCQDNFAARFGATVQRRGRLQSLSGINLATARLFVETLMVVGIGGMVI
                     WARETGAPAAETASIVSMFGIAAMRLMPSANRILGNMAELKRRTTVIMALHAELAATE
                     TAAEAPPRPRPAGPVDPACALVLDGVRFRYPAAEQSSLTGVSLAIRRGEAVGLVGASG
                     AGKSTLVDVILGLLVPTDGSVAINGHPATCPAADHDVGYVPQHVVVIDDTLRRNVAFG
                     LDDDQIDEQAVWRALEQAHLDQVVRALPQGLDTRLGERGTRLSGGQRQRIGIARALYT
                     DPAILILDEATSALDSETEQGIVAAIDTLRGDKTVIVIAHRLSTVRDCDRLVFMADGA
                     IADIGTFDELQARVPRFRTMVELSEVRRPSAEEAAP"
     gene            3055..3873
                     /locus_tag="VLL76_09695"
     CDS             3055..3873
                     /locus_tag="VLL76_09695"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HSV29825.1"
                     /translation="MSRIAISNIGLPPLDHVGLLPAVAALGVRGVEVAPSRVWADTWH
                     GLSAAEVEAYRRALADAGLSVVGIHSLFFDRPHLGLFKPEARAETLDFLVHLSALCRD
                     LGGRTLIYGGGRHRRDLAPDAAMAECRSFLSELLPRVEAHGTTLCFEPLGPKDTDFLN
                     TAAECLALVEEFDHPALGHQLDAKALADNGEADAATFAAAKDRICHYHANDPGLVVVG
                     STGAVDHAALGGLLRGIGYDGWVSVEQRMLSPTDPLADLAASVAAVKACYGEAR"
     gene            3870..4643
                     /locus_tag="VLL76_09700"
     CDS             3870..4643
                     /locus_tag="VLL76_09700"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29826.1"
                     /translation="MTPFNRPGWVPRLEAGTRLLIAGASGGLGNALVSMLLEGSDGIV
                     IGAHGATKSVETDDPRVLKLIRPFDGAADCTALVDEFAAKAGGIDALVCLSGGIHFSG
                     HWKDMPAELWQKDMEVNLNQPFYLARAAMERMKAQGSGGRILLNGTESALHGGSAMSF
                     PYAIAKRGTECMVQGLAREGAPDGILVNGVRFGYITSGFHQRWHAKTPADMDARAQLV
                     PLKRGGHPDEAAALMIWMLSGWSQFVTGQMFALTGGDWL"
     gene            complement(4671..>5293)
                     /locus_tag="VLL76_09705"
     CDS             complement(4671..>5293)
                     /locus_tag="VLL76_09705"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29827.1"
                     /translation="KLINMDFEEALERLPELVGGRKVGVFLIDGAHDYRSQLMGLLLI
                     KPFLADNAVIIVDDANYPDVRQSTRDFLVSHPEFKMVFEAYSAGHPANLDKATLAGFE
                     ATWLNGVNVLVKDPDNILPAMLPPVPATRELYVNEWLVHRHRLAELAPDAMDLAQRAL
                     DGADLAPAIDKLKAGHAARKAEFDGRYPDRNVFSAGLTEGRFTDWG"
BASE COUNT          748 a         1906 c         1794 g          845 t
ORIGIN      
        1 cgtgctgaac gccgaccgcc tgacccgcct gttcgaggcc gggctgtcga ccttgctgat
       61 cagcgtctac gacagcaagg aggacgccga ccgcctgggc gctctgtgcg ccgatgccgg
      121 cctgcgcccc gaccagtacg tcatccgcca tcgctacctg ccgccggaag aggatttcgg
      181 catcaccctg tccaaccgcg ccggcatgat ggacgccgcc gagttcaagc tgccgacccc
      241 ggccgagccg ctgaccgcgc cgtgctatta tccgcactac accttcttca tggattatct
      301 cggcgacgtg ctgctgtgcc cgcatgattg gggcaagaag cgcgtggtcg gcaatctgcg
      361 cgaccaggac ttcctcgaca tctggaccgg cgaggcgttc tcggcggccc ggcgccgtct
      421 ggcggcgggc gaccgcgcct tcgcgccgtg cggcggctgc gacgtcaagg gcgccctgat
      481 gggggcgaag cattcccagt tgtgggtgca actggaggcc gcgaagcggg gtgggtgatg
      541 cgtcaggtcc tggtcaccgg ggctagctcg gacatcggtc tggcggtttg ccgccgcttt
      601 ctcgacgacg attgccgcgt cgtcgcccat taccgcacgc cgcgccccga gctggccgcc
      661 ctggaagccg agcgcggcgt ggtcccgctg gccctggacc tgtcggaccc cgaggcgctt
      721 gaggacgggc tggcccgcaa ccgggacctc atcacccggt ccgacgtgct ggtgcattgc
      781 gtcggcatgc tgcaatcggc gccgttcgcc caggtgaccg cccgccagct ggtggaccat
      841 ttcaccgtca acaccgtctc ggccctcgcc ctgatgcgcg acgtggcgcc ggccatggtg
      901 caacggggct ggggccgcat cgtgctgctg agcagcatcg gggtgaagtt cggcggaggc
      961 agcggcagct tcgcctatgc cctgagcaag caggcgctgg aatacctgcc ggccgaccac
     1021 cgcgcctggg cggcggccaa cgtgctggtc aacgtggtgc gggtcgggct gaccgacacc
     1081 cgcatccatc gccaggaccc gaccaaggac atgagccggc gcgtcgctct ggtgccgtgc
     1141 ggccgcatgg cggcccccga cgagatcgcc gccacggtgc actggctggg ctcggacctc
     1201 aacaccttca ccaccggcca gaccatcggc gtggcggggg gcgagtgacg tgggcagcgg
     1261 cctgatcgcc aagcttctgg ccctgcccga ccgccggggc cgccggcgca tcttcgcact
     1321 gctgccggtc atgctgaccg ccagcctgct ggaactgggc ggcttcggcc tgctggtcag
     1381 cctgctcaac gccctgctgg gcgccgcccc gctggaggcc ggcgtgatgc gctgggccac
     1441 cggctggatc aaggacgtcg attcctggac cttcgccatc ggcgtggtga tgttcttcgc
     1501 gctgaagaac ctggcgctgc tgggcctggg ctacctgacc agccgggtgg cgttcgattc
     1561 cctggccgac ttcctgcgcc ggctctacgg ccattacctg cgccagccct atgtcaccca
     1621 tctcggccgc aactcggccg agatgctgaa ccatctggcc agcagcgccc cgatcgcctt
     1681 cgactcgctg cgcatcctgc tcgagatcgt tctcgaggcg gtgctttcgc tggcgaccct
     1741 ggcgctgctg ctgtcggtcc agcccgagct gaccgtggcc ggcatggtcg gcctgttcgt
     1801 cgtcgggttc ctgttccaca agctgaccag cccggtcttc cgccgctggg gcgccgaggc
     1861 gtacggccac gagctgcagg cgatgacgct ggccaaggaa agcttcggcg ccatcaagga
     1921 gatcctggtc agcggctgcc aggacaattt cgccgcccgc ttcggcgcga ccgtgcagcg
     1981 ccgcggccgt ctgcaaagcc tgtcgggcat caatctcgcc accgcgcggc tgttcgtcga
     2041 aacgctgatg gtggtgggca tcggcggcat ggtgatctgg gcgcgcgaaa ccggcgcgcc
     2101 ggccgccgag accgcgtcca tcgtcagcat gttcggcatc gccgccatgc gcctgatgcc
     2161 gtcggccaac cgcattctcg gcaacatggc cgagctcaag cgccggacca cggtcatcat
     2221 ggcgctgcat gccgaactgg cggcgaccga gaccgccgcc gaggcgccgc cgcgcccgag
     2281 gccggccggc ccggtggatc ccgcctgcgc cctggtcctc gacggcgtgc ggttccgcta
     2341 tccggcggcc gagcaatcgt cgttgaccgg cgtgtcgctg gccatccggc ggggcgaggc
     2401 ggtgggcctg gtcggcgcct cgggggcggg caagtcgacc ctggtcgacg tcatcctggg
     2461 cctcttggtt cccaccgacg gcagtgtcgc catcaacggc catcccgcca cctgccccgc
     2521 cgccgaccat gacgtcggct acgtgccgca gcatgtggtg gtgatcgacg acaccctgcg
     2581 ccgcaatgtc gccttcggcc tcgacgacga ccagatcgac gaacaggcgg tgtggcgcgc
     2641 gctggagcag gcccatctcg accaggtggt gcgcgcgttg ccgcagggat tggacacccg
     2701 cctgggcgag cgcggcaccc ggctgtcggg cggccagcgc cagcgcatcg gcatcgcccg
     2761 cgccctttac accgaccccg ccatcctgat cctcgacgag gccacctcgg ccttggacag
     2821 cgagaccgaa cagggcatcg tggccgccat cgatacgctg cgcggcgaca agacggtgat
     2881 cgtcatcgcc caccgcctca gcaccgtgcg cgattgcgac cggctggtgt tcatggccga
     2941 cggcgccatc gccgacatcg gcaccttcga cgagttgcag gcccgggtgc cgcgcttccg
     3001 caccatggtc gagctgtccg aggtgcgccg tcccagcgcc gaggaggccg cgccatgagc
     3061 cgcatcgcca tctccaacat cggcctgccg ccgctggacc acgtcgggct gctgccggcc
     3121 gtcgccgctc tcggcgtgcg cggggtcgag gtggcgccca gccgggtgtg ggccgacacc
     3181 tggcatggcc tgtccgccgc cgaggtcgag gcctaccgcc gcgccctggc cgatgccggc
     3241 ctttcggtgg tggggatcca ttcgctgttc ttcgaccgcc cccatctggg cctgttcaaa
     3301 cccgaggcgc gcgccgagac gctggatttc ctggtccacc tgtcggcgct gtgccgcgac
     3361 ctgggcggcc gcaccctgat ctatggcggc ggacgccacc ggcgcgacct ggcccccgat
     3421 gccgccatgg ccgaatgccg gtcgttcctg tccgaactgc tgccgcgcgt cgaggcgcac
     3481 ggcaccacgt tgtgcttcga gccgctcggc cccaaggaca ccgacttcct caacacggcg
     3541 gccgaatgcc tggccctggt cgaggaattc gaccacccgg ccctgggcca tcaactggac
     3601 gccaaggcgc tggccgacaa tggcgaggcc gatgccgcca ccttcgccgc cgccaaggat
     3661 cgcatctgcc actaccacgc caacgatccc ggcctggtgg tggtcggttc gaccggcgcg
     3721 gtggaccatg ccgcgctcgg cggcctgctg cgcggcatcg gctatgacgg ctgggtgtcg
     3781 gtggaacagc gcatgctgtc gccaaccgac ccgctggccg atctcgccgc cagcgtcgcc
     3841 gccgtcaagg cttgctatgg agaagcccga tgaccccgtt caatcgcccc ggctgggtgc
     3901 cgcgcctgga ggcgggcact cgattgctga tcgccggcgc ctcgggcggg ctgggcaacg
     3961 ccctggtgtc catgctgctg gaaggctcgg acggcatcgt catcggcgcc cacggcgcca
     4021 ccaagagcgt cgaaaccgac gacccgcgcg tgctcaagct gatccgcccg ttcgacggcg
     4081 ccgccgattg caccgccctg gtggacgagt tcgccgccaa ggccggcggc atcgacgccc
     4141 tggtctgcct gtcgggcggc atccactttt ccggccattg gaaggacatg ccggccgagc
     4201 tgtggcagaa ggacatggag gtcaacctca accagccctt ctacctggcc cgcgccgcca
     4261 tggagcgcat gaaggcgcaa gggtcgggcg gccgcatcct gctgaacggc accgaatcgg
     4321 ccctgcacgg cggcagcgcc atgagctttc cctacgccat cgccaagcgc ggcaccgaat
     4381 gcatggtcca gggcctggcc cgcgagggcg cgcccgacgg catcctggtg aacggcgtgc
     4441 gcttcggcta catcacctcg ggcttccacc agcgctggca tgccaagacg ccggccgaca
     4501 tggacgcgcg cgcccaattg gtgccgctga agcgcggcgg ccaccccgac gaggcggccg
     4561 ccctgatgat ctggatgctg tccggctgga gccagttcgt caccggccag atgttcgccc
     4621 tgaccggcgg cgactggctt taagctgtca ccctgaggcg cagccgagcg tcagccccag
     4681 tcggtgaagc ggccctcggt caatcccgcc gagaacacgt tgcggtcggg atagcggccg
     4741 tcgaactcgg ccttgcgcgc ggcatggccg gccttcaact tgtcgatggc gggtgccaag
     4801 tcggcgccgt ccagcgcccg ctgcgccaag tccatcgcgt cgggggccag ctcggccagg
     4861 cgatggcggt gcaccagcca ttcgttgacg tacaattcgc gcgtcgccgg caccggcggc
     4921 agcatggccg gcaggatgtt gtcgggatcc ttgaccagca cattgacgcc gttgagccag
     4981 gtcgcctcga agccggccag ggtcgccttg tccagattgg cggggtggcc ggcggaatag
     5041 gcctcgaaca ccatcttgaa ttcggggtgc gacaccagga agtcgcgggt gctctggcgc
     5101 acgtcggggt aattggcgtc gtcgacgatg atcaccgcgt tgtcggccag gaacggcttg
     5161 atcagcagca gccccatcaa ctggctgcgg taatcgtggg cgccgtcgat caggaacacg
     5221 ccgaccttgc ggccgcccac cagctccggc aggcgctcga gcgcctcctc gaaatccatg
     5281 ttgatcagct tgg
//
LOCUS       DATIKR010000619         3131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_215350, whole genome shotgun sequence.
ACCESSION   DATIKR010000619 DATIKR010000000
VERSION     DATIKR010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215350"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="VLL76_09710"
     CDS             complement(<1..661)
                     /locus_tag="VLL76_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HSV29828.1"
                     /translation="MKKRILAVGATAIVLAIAATGFRWATEWRFVETTDDAYVEGDIT
                     NMAPKVAALVVAVEAGDNVAVKAGDVLVRLDDTDYRARVAEARALVAARDAQVAQLDE
                     RVAVQEAVAHQAAAGIAAAKADVTRSRADLLRTERLVKDDYVSRQRFDAQTAEAAKAD
                     AGFKGSNAQLAAARRQLAVLEAERAVVRAQADQARALLAQAESDLAATVIRAPVDGVI
                     GN"
     gene            815..901
                     /locus_tag="VLL76_09715"
     tRNA            815..901
                     /locus_tag="VLL76_09715"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:849..851,aa:Leu,seq:cag)
     gene            990..1601
                     /locus_tag="VLL76_09720"
     CDS             990..1601
                     /locus_tag="VLL76_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HSV29829.1"
                     /translation="MAIHYHVGDLPPGLDFGPVVAVDSETMGLNLHRDRLCVVQLSAG
                     DGDAHLVHFPEPHYHAPNLQRLFADQGVTKLFHYARFDLAMIRKYLGVRCTPVWCTKV
                     ASKLVRTNTDRHGLKDLCRDLAGIELSKQQQTSDWGAAELTAEQMAYAASDVLYLHQI
                     KTRMEALLDREGRRDLAEACFRFLPDRAELDLEGWGEEDIFSH"
     gene            1887..3089
                     /gene="coaBC"
                     /locus_tag="VLL76_09725"
     CDS             1887..3089
                     /gene="coaBC"
                     /locus_tag="VLL76_09725"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HSV29830.1"
                     /translation="MLDGRRILLVISGGIAAYKSLELIRRLRERGAGVRCILTKGGEQ
                     FVTPLSVAALSGDKVYQDLFSLTDEAEMGHIRLSREADLVVVAPATADLMARMAAGMA
                     DDLATTALLATDKPVLVAPAMNAFMWAHPATQANIRTLEGRGIRRVGPAAGELACGEV
                     GEGRMAEVSDIVAAIEAMLSSGPLKGMKALVTSGPTHEPIDPVRFIANRSSGKQGHAI
                     AAALHALGAQVTLVTGPVRLPDPAGIEVVHVETAREMLGACLGRLPVDIAVCAAAVAD
                     WTVSNASKEKRKKQPDGPPPAIELAPNPDILATLSEKGGARPRLVVGFAAETENLLAH
                     AKSKLARKGCDWIVANDVSPASGTFGGDFNSVHLITASGTEEWPRIAKADVAERLAWR
                     IVDALKGK"
BASE COUNT          485 a         1077 c         1075 g          494 t
ORIGIN      
        1 ggttgccgat gacaccgtcc accggggcgc ggatcacggt ggcggcgagg tcggattccg
       61 cctgggccag cagggcgcgg gcctggtcgg cctgggcgcg gaccacggcg cgttcggcct
      121 cgagcaccgc caactggcgg cgggcggcgg ccaactgggc gttcgagccc ttgaagccgg
      181 catcggcctt ggccgcctcg gcggtctggg cgtcgaagcg ctggcggctg acataatcgt
      241 ccttgaccag gcgttcggtg cgcagcaggt cggcgcggct gcgggtgacg tcggccttgg
      301 cggcggcgat gccggcggcg gcctggtgcg ccaccgcctc ctgcaccgcc acccgctcgt
      361 ccagttgcgc cacctgggcg tcgcgggcgg cgaccagggc gcgggcctcg gcgacgcggg
      421 cgcggtagtc ggtgtcgtcc aggcgcacca gcacgtcgcc cgccttgacg gcgacgttgt
      481 cgccggcctc gaccgccacc accaaggcgg ccaccttggg cgccatgttg gtgatgtcgc
      541 cttccacata ggcgtcgtcg gtggtctcga cgaagcgcca ttcggtggcc cagcggaagc
      601 ccgtggcggc gatcgccagg acgatggcgg tcgcgccgac ggcaaggatg cgcttcttca
      661 tgagcccccc ggctgaactg aacggttcag ttttagacga ccaacgcgcg aatggtcaag
      721 tcatccagat tttttccgca aaacagtgtt gacaccgccc cggcggtcgg atatccctct
      781 gcgcctcagc cggggctacc ccgctgaacc acctgcccag gtggcggaat tggtagacgc
      841 gcacggttca ggtccgtgtg gccgtgaggt catggaagtt cgagtcttct cctgggcacc
      901 atctcttccc caccaaggaa gagccctccg acgaggggtt tgatgcgaga gcggctcctc
      961 ggggacaccc ctaaggagcc gttcgcatta tggccatcca ctatcatgtc ggcgaccttc
     1021 cccccggcct ggatttcggc ccggtggtcg cggtcgattc cgagaccatg gggttgaacc
     1081 tgcaccgcga ccgcctgtgc gtggtgcaat tgtcggccgg cgacggcgac gcccatctgg
     1141 tgcatttccc cgagccgcat taccacgccc ccaatctgca gcggctgttc gccgaccagg
     1201 gcgtgaccaa gctgttccac tatgcccgct tcgaccttgc catgatccgc aagtatctcg
     1261 gcgtgcgctg caccccggtg tggtgcacca aggtggcgtc caagctggtg cgcacaaata
     1321 ccgaccgcca cggcctcaag gatttgtgcc gcgacctggc cggcatcgag ctgtcgaagc
     1381 agcagcagac ctcggattgg ggtgccgccg agctgaccgc cgagcagatg gcctatgccg
     1441 cctcggacgt gctctatctg catcagatca agacccggat ggaggctttg ctcgaccgcg
     1501 agggccgtcg cgacctggcc gaggcctgct tccgcttcct gcccgaccgc gccgagctgg
     1561 acctggaagg ctggggcgaa gaggacatct tctcgcatta gggagatcga ggggcgttcc
     1621 acacggggca atcgggtgaa gcccggctcg gcgggcgact ggcgcgttga gcgcccgtgg
     1681 agcgggcctg aagcgtagcg gaaggcgcct agcggaacgt agccaagcca ccggaggtgg
     1741 cgcccggcga atgggggcat gaacaaagca gggtaatcgg gttcacccga tagccctggc
     1801 gttccacatc gccgcttgcg caaatccatg gcggggatta ccttaaccac actctgtttt
     1861 cgtaatttcg tggtcgaggt ccccctttgc tcgacggacg gcgcatcctt ctcgtcattt
     1921 ccggcggcat cgccgcgtac aaatcgctgg agctgatccg gcggttgcgc gaacgcgggg
     1981 ccggcgtgcg ctgcatcctg accaagggcg gcgagcaatt cgtcacgccg ctgtcggtgg
     2041 cggcgctgtc gggcgacaag gtctaccagg acctgttttc gctgaccgac gaggccgaga
     2101 tgggccatat ccgcctgtcg cgcgaagccg atctggtggt ggtggcgccg gccacagccg
     2161 acctgatggc gcgcatggcc gccggcatgg ccgacgattt ggcgaccacg gcgctgctgg
     2221 ccaccgacaa gccggttctg gtcgcgccgg ccatgaacgc cttcatgtgg gctcaccccg
     2281 ccacccaggc caacatccgc accctggaag ggcgcggcat ccgccgggtc ggcccggccg
     2341 ccggcgagct ggcctgcggc gaggtcggcg agggccgcat ggccgaggtg tccgacatcg
     2401 tcgccgccat cgaggccatg ctgagcagcg gtccgctcaa gggcatgaag gcgctggtga
     2461 ccagcggccc gacccatgag cccatcgacc cggtgcgctt catcgccaac cgctcgtcgg
     2521 gcaagcaggg ccacgccatc gccgccgccc tgcatgccct gggcgcccag gtcacgctgg
     2581 tgaccggccc ggtgcggctg cccgatcccg ccgggatcga ggtggtccac gtcgagacgg
     2641 cgcgcgagat gctgggcgcc tgcctgggca ggctgccggt ggacatcgcc gtctgcgccg
     2701 ccgccgtcgc cgactggacg gtgtcgaacg ccagcaagga aaagcgcaag aagcagcccg
     2761 acggcccgcc gcccgccatc gagctggcgc ccaaccccga catcctggcg accctgtcgg
     2821 aaaagggcgg cgcgcggccg cgcctggtgg tcggcttcgc cgccgagacc gagaatctac
     2881 tggcccacgc caagtccaag ctggcgcgca agggctgcga ctggatcgtc gccaacgacg
     2941 tgtcgcccgc cagcggcacc ttcggcggcg acttcaacag cgtgcacctg atcaccgcat
     3001 ccggcaccga ggaatggccg cgaatcgcca aggccgacgt ggccgaacgc ctggcctggc
     3061 gcatcgtcga cgcgctgaag gggaaatgat gaagaccgtg cgcattccca tcctgcggct
     3121 gccccatgcc g
//
LOCUS       DATIKR010000620         1757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_94480, whole genome shotgun sequence.
ACCESSION   DATIKR010000620 DATIKR010000000
VERSION     DATIKR010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94480"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1096)
                     /gene="cysK"
                     /locus_tag="VLL76_09730"
     CDS             complement(149..1096)
                     /gene="cysK"
                     /locus_tag="VLL76_09730"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HSV29831.1"
                     /translation="MSTPEFRGRIYDSIIDTIGATPLVRIKRLGAESGSKADIVGKCE
                     FFNPLASVKDRIGFAMIEAAERDGRIKPGATLVEPTSGNTGIALAFVCAAKGYRLILT
                     MPESMSLERRKMLTHLGAEIVLTPAAKGMTGAVKEAERLVSEIPGAVMCQQFENPANP
                     AIHEKTTAEEIWKDTDGKVDAVIAGVGTGGTLSGIGRVLKSRKPSVRMIAVEPEDSPV
                     LSGGAPGPHKIQGIGAGFVPGNLDRAVVDEILQIGNETAFATARKAAKLEGLPVGISG
                     GAAIAAALEVASRDDMAGKLIVVILPSFAERYLSTALFE"
     gene            complement(1175..1630)
                     /locus_tag="VLL76_09735"
     CDS             complement(1175..1630)
                     /locus_tag="VLL76_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSV29832.1"
                     /translation="MIRPSKKMLFAIEAVLDIAYHAGGEPVQSREITRRQGIPRRYLE
                     QTLQQLVRSGILVGVRGPRGGYRLARERRRISVGEIVRVVRAMETAEDPFQDVPASQL
                     GKTVIRPMWGDLQEEMMAQLDAITVDDLCMRAYKTGIPSEAHQKLDFTI"
     gene            complement(1627..>1757)
                     /locus_tag="VLL76_09740"
     CDS             complement(1627..>1757)
                     /locus_tag="VLL76_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HSV29833.1"
                     /translation="IAQMVVAKVSQGIWVETAELSDSERGAGGFGSTGLAKQEAKA"
BASE COUNT          269 a          582 c          587 g          319 t
ORIGIN      
        1 cgctggatct gctgttccgt aaagtccatg tcccactcac cgtcatcccc gcgcaggcgg
       61 ggatccaggg gcgtttgcgg tcgtccaggc ggggccatgg acccccgcct gcgcgggggt
      121 gacggaaaat gaagccgtcg cctaaaacct attcaaacaa cgcggtcgaa agatagcgct
      181 cggcaaagct gggcaggatg acgacgatca acttgccggc catgtcgtcg cgcgacgcca
      241 cttccagcgc ggcggcgatg gcggcgccgc ccgagatgcc gaccggcagg ccttccagct
      301 tggccgcctt gcgggcggtg gcgaaggcgg tctcgttgcc gatctgcagg atctcgtcca
      361 ccacggcgcg gtccaggttg ccgggcacga agccggcgcc gatgccctga atcttgtgcg
      421 ggccgggggc gccgcccgac agcaccgggc tatcctcggg ctcgaccgcg atcatgcgga
      481 ccgacggctt gcggcttttc agcacgcggc cgatgcccga cagggtgccg ccggtgccga
      541 cgccggcgat caccgcatcg accttgccgt cggtatcctt ccagatttcc tcggcggtgg
      601 tcttctcgtg gatggcgggg ttggccgggt tctcgaattg ctggcacatc accgcgccgg
      661 ggatttccga caccaggcgc tcggcctcct tgaccgcgcc ggtcatgccc ttggcggcag
      721 gcgtcagcac gatctcggcg cccagatggg tcagcatctt gcggcgttcc agcgacatgc
      781 tttccggcat ggtcaggatc aggcgatagc ccttggcggc gcagacgaag gccagcgcga
      841 tgccggtgtt gcccgaggtc ggctcgacca gggtggcgcc gggcttgatg cggccgtcgc
      901 gttcggccgc ctcgatcatg gcgaagccga tgcggtcctt gacgctggcc agcggattga
      961 agaactcgca cttgccgaca atgtcggcct tggatcccga ttcggcgccc agccgcttga
     1021 tccgcaccaa cggagtggca ccgatggtgt cgatgatcga atcatagatg cggccgcgga
     1081 actcgggagt gctcatctgt atttacccca cactgaagtg tagttcgtaa tcgttctaca
     1141 gtttacacca tccaccgtgg cgggcaaccg cgctttagat ggtgaagtcc agcttctggt
     1201 gcgcctcgct gggaatgccg gtcttgtagg cgcgcatgca cagatcgtcg acggtgatgg
     1261 cgtcgagctg cgccatcatc tcttcctgca gatcgcccca catgggccgg atcacggtct
     1321 tgccgagctg cgaggcgggc acgtcctgga acgggtcctc ggcggtctcc atggcgcgca
     1381 ccacccgcac gatctcgccc accgagatgc ggcggcgttc gcgcgccagg cgatagccgc
     1441 cgcggggacc gcgcacaccg accaggatgc ccgagcgcac caattgctgc agcgtctgct
     1501 ccagatagcg gcgcgggatg ccctggcggc gggtgatctc gcggctttgc accggttcgc
     1561 cgccggcgtg gtaggcgatg tcgagcaccg cctcgatggc gaacagcatc ttcttggacg
     1621 gccggatcat gcttttgctt cctgcttggc gaggccggtc gagccgaagc cgccggcgcc
     1681 ccgttcgctg tcggacaatt cggcggtctc gacccagatg ccttgcgaca ccttggcgac
     1741 caccatctgg gcgatgc
//
LOCUS       DATIKR010000621         1791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_82528, whole genome shotgun sequence.
ACCESSION   DATIKR010000621 DATIKR010000000
VERSION     DATIKR010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82528"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..907)
                     /locus_tag="VLL76_09745"
     CDS             complement(62..907)
                     /locus_tag="VLL76_09745"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSV29834.1"
                     /translation="MARIVVVGSVASDEVVRLSERVREGAHLNGRPLGIRLGGGGANT
                     AVALAAAGHHVALVTAVGEDAAGRWQRDELAAAGVDVSAIATVPGPSTRSICLVDCDG
                     ERTIVNLGRAQEAAPPRRLLDLAADLFYVRTRATGLAPLLAELAERARVVAHVPPVEP
                     GVFPAQIILCSASDLDVAALADPVAMARSVAGDLLEWAVVTRGPKGAEALSQAGRRID
                     VPAPKVAPVDTVGAGDAFAAGLCHALAGGATMADALAVATRWGAAKVAQEGSALTAEA
                     VKRLI"
     gene            1173..>1791
                     /locus_tag="VLL76_09750"
     CDS             1173..>1791
                     /locus_tag="VLL76_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012522633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HSV29835.1"
                     /translation="MSELPMRASGAAPPEAEDFYAESLRQMKASGIPFLLGGTYAVCA
                     YTGITRQTKDIDMFCRAGDYPRVLAHFSRAGFRTSVEDERWIAKVHYGPYFFDLIFNS
                     TIAINPVTEQWFKEAHTARVCGIETKLIPPTELIWAKAFVQDRHKYDGADVAHLILRQ
                     HRQVDWRRLLGHFEQYWEVLLIHVLNFRFIYPTERECIPRWLLDEL"
BASE COUNT          278 a          674 c          574 g          265 t
ORIGIN      
        1 ccgtccatca ggtcagccac gcggtcacca agaccaagga agcagccgaa gtgctggcgc
       61 gctagatcag ccgcttcacc gcctcggcgg tgagggccga gccttcctgg gccaccttgg
      121 cggcgcccca gcgggtcgcg accgccaggg cgtccgccat cgtcgccccg cccgccaagg
      181 cgtggcacag gccggcggcg aaggcgtcgc ccgcccccac cgtgtccacc ggcgccacct
      241 tgggcgccgg cacgtcgatg cgccgaccgg cctgcgacag cgcctcggcg cccttggggc
      301 cgcgcgtcac caccgcccat tccagcagat cgccggccac cgatcgcgcc atcgccaccg
      361 ggtcggccag ggcggcgacg tccaggtcgg atgccgaaca caggatgatc tgggccggaa
      421 atacccccgg ctcgaccggc ggcacatgcg ccaccacccg cgcccgttcc gccagttcgg
      481 ccagcagcgg cgccaggccg gtggcgcggg tgcgcacata gaacaggtcg gcggccaggt
      541 cgagcagccg gcgcggcggc gcggcctcct gcgcgcggcc cagattgacg atggtgcgct
      601 cgccgtcgca atccaccagg cagatggacc gggtactggg accgggcacg gtggcgatgg
      661 ccgacacgtc cacgccggcc gccgccagtt cgtcgcgctg ccaacgcccg gccgcgtctt
      721 cgccgaccgc cgtcaccagc gccacgtgat ggccggcggc cgccagggcc accgccgtgt
      781 tggcgccgcc gccgcccagc cggatgccca gcggccggcc gttgagatgg gcgccttcgc
      841 gcacccgttc cgacagccgc accacctcgt ccgaggccac gctgcccacc accacgatcc
      901 gcgccatgga tcctccctcc cgtcgctcgg ccttagccta gcggagcgaa aggccgccgc
      961 aaaccgctca agcaggcagg atcatttcat ccggccctgc cccttgtagg gcttgtgctg
     1021 ccgcttggtg cgcttgttct tcgggcgggt gttgcgggaa ttgccgatcg aggtgacgcg
     1081 cttcgccatg ggggcctccg tctgtttccg ccaagggaac acccaagcgc cggccggtgt
     1141 tcgtgtcgtg ccaatcggag aaaacagcca gcatgtcgga acttcccatg cgcgcctcgg
     1201 gcgccgcccc gcctgaagcc gaggatttct acgccgagtc actgcgccag atgaaggcgt
     1261 cgggcatccc gttcctgctg ggcgggacct atgcggtctg cgcctatacc ggcatcaccc
     1321 ggcagaccaa ggacatcgac atgttctgcc gcgccggcga ctatccgcgg gtcctggccc
     1381 atttctcgcg cgccggcttc cgcaccagcg tcgaagacga gcgctggatc gccaaggtcc
     1441 attacggccc ctatttcttc gacctgatct tcaactcgac catcgccatc aacccggtga
     1501 ccgagcaatg gttcaaggaa gcccacaccg cgcgggtgtg cggcatcgag accaagctga
     1561 tcccgcccac cgagctgatc tgggccaagg ccttcgtgca ggaccgccac aaatacgacg
     1621 gcgccgacgt cgcccacctg atcctgcgcc agcaccggca ggtggattgg cggcggctgc
     1681 tgggccattt cgagcaatat tgggaagtgc tgctgatcca cgtgctgaac ttccgcttca
     1741 tctatccgac cgagcgcgaa tgcatcccgc gctggctgct ggacgagttg a
//
LOCUS       DATIKR010000622         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_33010, whole genome shotgun sequence.
ACCESSION   DATIKR010000622 DATIKR010000000
VERSION     DATIKR010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33010"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1508
                     /locus_tag="VLL76_09755"
     CDS             <1..>1508
                     /locus_tag="VLL76_09755"
                     /inference="COORDINATES: protein motif:HMM:NF012470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HSV29836.1"
                     /translation="TVALAAALASDAGAAEAKNVIIFISDGGGFNAYWSASYYQHGRL
                     GGQPYDSEAWLKYASLTASLNTMKKGASEDDDEPSYDPSKAWSMEGVYAMALAGGASF
                     KGYADLKSSPTDSAASGTAMAMGAKAYNGAVNYVPDYSQRIRAARGRTISELAKTKGK
                     ATGVVTSVYLSDATPSTFGGAHSSGRGSRRDIANQMFNSGTLDLIMGGGHPEYDRNGT
                     PVEPTKESDYDMVGGSFTWNMLTTGRHSQGWKLVQSKPEFEALMSGPTPARVLGIPRV
                     YQTLQQQRQTRDWDRDGRVDDADTRAAPVFGDPFIATVPTLATMTRGALNVLGKNPKG
                     FYVMIEGGAVDWAGHANQPARIIEEMIEFNAAVEAAQDWVNRNSSWDETLIIITSDHE
                     TGLLLGLNSDRMVFDPVINRGAGRMPGMYFNSGGHSNLLVPIMARGPGAELFDKHVKG
                     HDPVHGRYVDNTSIFEVMKAAMGASTSSGYDGNYGGSYAPGGELLYDSQPGG"
BASE COUNT          291 a          493 c          499 g          225 t
ORIGIN      
        1 gacagtcgcg cttgccgcgg cgctggcgtc tgacgccggc gcggccgaag cgaagaacgt
       61 cattattttc atcagcgacg gcggcgggtt caatgcctac tggtcggcca gctattacca
      121 gcacggccgg ctcggcgggc aaccgtacga cagcgaggcg tggctcaagt atgcctcgct
      181 cacggcgtcg ctgaacacca tgaagaaggg tgcgagcgag gatgacgacg agccgtcgta
      241 tgacccatcc aaggcatggt cgatggaggg tgtctacgcc atggcgctgg cgggcggggc
      301 atcgttcaaa ggctacgcgg atctgaagag ctcccccacc gactcggccg cctcgggcac
      361 cgccatggcc atgggcgcaa aggcttacaa cggcgcggtc aactacgtcc cggactacag
      421 ccagcgcatc cgggcggcgc gtggacggac catctccgaa ctggcgaaaa ccaagggcaa
      481 ggcaaccggc gtggtgacga gcgtttacct gtcggacgcc actccctcca ccttcggcgg
      541 cgcccacagt tccggccggg gcagcaggcg cgacatcgcc aaccagatgt tcaacagcgg
      601 cacgctcgac ctgatcatgg gcggcgggca tcccgagtac gacaggaacg gcacgccggt
      661 cgagccaacc aaggagagcg actacgacat ggtcggcggc tcgttcacat ggaacatgct
      721 gacgaccggc cgccattcgc agggctggaa gctggtgcag tccaagccgg agttcgaggc
      781 gctgatgagc ggaccgacgc ccgccagggt tctgggcatt ccccgggttt accagaccct
      841 ccagcagcag cggcagacgc gcgactggga ccgcgacggc cgggtggacg acgccgacac
      901 ccgcgcggcc ccggtcttcg gcgatccatt catcgccaca gtgcccacgc tcgccaccat
      961 gactcggggc gcgctcaacg tgctgggcaa gaatcccaag ggcttctacg tgatgattga
     1021 aggcggcgcg gtggactggg cgggccatgc caaccagccc gcccggatca tcgaggagat
     1081 gatcgagttc aacgccgccg tagaggccgc ccaggactgg gtcaaccgca acagcagttg
     1141 ggacgagaca ctcatcatca tcacctccga ccacgagacc gggctgctgc tggggctgaa
     1201 ctccgaccgg atggttttcg acccggtgat caaccgcggc gcggggcgca tgccgggcat
     1261 gtacttcaac tcgggcggcc actccaacct gctggtgccg atcatggccc gcggtccggg
     1321 tgccgagctg ttcgacaaac atgtgaaggg gcacgacccg gtccacggcc ggtatgtgga
     1381 caacacctcg atcttcgagg tcatgaaggc ggccatgggt gccagcacct ccagtggcta
     1441 tgatggaaac tacggcggct cttacgcccc cggcggagag ttgctctatg attcccagcc
     1501 cggcggct
//
LOCUS       DATIKR010000623         3068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_33014, whole genome shotgun sequence.
ACCESSION   DATIKR010000623 DATIKR010000000
VERSION     DATIKR010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33014"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..746
                     /locus_tag="VLL76_09760"
     CDS             63..746
                     /locus_tag="VLL76_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29837.1"
                     /translation="MSQPIVHLRGVSKHYGEGATRVDALHPLDLDIHAGSVVGLLGPS
                     GSGKSTLLNLIGAIADPDGGTIALDGETVFDGRWLRRDLRKLRLEKIGFIFQFHNLIP
                     FLNVSENIEVVLDLAGWPRGKARARAAELLDYLQVSERAQARPSELSGGQAQRVAIAR
                     ALANNPRIILADEPTAALDSDRAGIVMDLLRKVAEERGAAVIVVTHDDKIMSRFDAIH
                     RLRDGRLVA"
     gene            746..1336
                     /locus_tag="VLL76_09765"
     CDS             746..1336
                     /locus_tag="VLL76_09765"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV29838.1"
                     /translation="MALRKSRDERRLEIIEANMRLAAKLGPDRITAEAIAQDLGVTQP
                     AIFRHFPRKDDIWTATVEWLADSLGTLWGEAMAGAPPEERLTALVEAHLGFIEAHPAV
                     PLVLLSPELQARHASVRQATARMMGLFHAQLSRALDDGRQAGAFDSGLDVARAAWMMI
                     ALIQGIAIRWTASQGRFDIRAEGLALIGMAVRGIVR"
     gene            1370..1609
                     /locus_tag="VLL76_09770"
     CDS             1370..1609
                     /locus_tag="VLL76_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29839.1"
                     /translation="MAMLDPESRKRLVAYFYEAFDEDNAGSMEAFAQNFLHNGAVFDL
                     VADNFPKATMSAVKQAMMEAYGLWEKARAEEKEEG"
     gene            complement(1606..2067)
                     /locus_tag="VLL76_09775"
     CDS             complement(1606..2067)
                     /locus_tag="VLL76_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSV29840.1"
                     /translation="MIVALDTNILAYAEGANDAARQAKALDLIAALPTGGAILPVQVL
                     GELFRVLTAKVRRPVAEVRTAILSWRDAMPVHDTTDQAMLSAMDLVADHGLQIWDALI
                     LAVAADARCRLLLSEDLQDGFTWHGVTVVNPFAPTIHPLLAPVLTPAVAAG"
     gene            complement(2064..2309)
                     /locus_tag="VLL76_09780"
     CDS             complement(2064..2309)
                     /locus_tag="VLL76_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSV29841.1"
                     /translation="MRNISAADANRHFSRILRDVQAGETVTVTSRGNPVATIQPAASA
                     APDQNLAKGALLTRLRAQAPAGATWRRGELYDDGANG"
     gene            complement(2404..>3068)
                     /locus_tag="VLL76_09785"
     CDS             complement(2404..>3068)
                     /locus_tag="VLL76_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014187829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29842.1"
                     /translation="AVTITVEDTGIGIPAEHLERIWEEFHQVGNTERDRGQGIGLGLA
                     IVRRLAGLLNHPVEVQSVPGQGSSFRVTVPLGQALPAASTEARPGAEAGGRLVLLVDD
                     DAMVLLGLQTLFRNWGYRVMIAGSGDQALEQLNRTGEAPDMVVSDYRLRGGEVGTDVI
                     LRIRRRLGVAIPGIVLTGEAGREAELKAAELGLGFIHKPVTARQLSAALESGFALGRK
                     AS"
BASE COUNT          493 a         1071 c         1051 g          453 t
ORIGIN      
        1 cagcgtggcc ggcgtccgcc atgccctggg gatcgacccc gcccgcgcgc tgggaggctg
       61 acatgagcca gccgatcgtc cacctgcgcg gggtgtcgaa gcattacggc gagggcgcca
      121 cccgggtgga cgcgcttcac ccgctcgacc tcgacatcca cgccggcagc gtcgtcgggc
      181 tgctgggtcc cagcggctcg ggcaagagca ccctgctcaa cctgatcggc gccatcgccg
      241 accccgatgg cggcaccatc gccctggacg gcgagacggt gttcgacgga cgctggctgc
      301 gccgcgacct ccgcaagtta cggctggaaa agatcggctt catcttccag ttccacaacc
      361 tgatcccctt cctgaacgtc agcgagaaca tcgaagtggt gctggacctg gccggttggc
      421 cgcgcggcaa ggcccgcgcc cgcgccgccg aattgctgga ttatctgcag gtgtccgagc
      481 gcgcccaggc ccgcccctcc gagctgtcgg gcgggcaggc ccagcgcgtc gccatcgccc
      541 gcgcgctggc caacaatccc cgcatcatcc tggccgacga acccacggcg gcgctggatt
      601 cggaccgcgc cggcatcgtc atggacttgc tgcgcaaggt ggcggaggaa cggggcgcgg
      661 cggtgatcgt ggtgacccac gacgacaaga tcatgtcgcg cttcgacgcc atccaccgcc
      721 tgcgcgacgg ccggctggtg gcgtgatggc attgcgcaag agccgcgacg agcggcggct
      781 ggagatcatc gaggccaaca tgcggctggc cgccaagctc ggccccgacc gcatcaccgc
      841 cgaggccatc gcccaggatt tgggggtgac ccagcccgcc atcttccgcc atttcccgcg
      901 caaggacgac atctggacgg cgaccgtcga gtggctggcc gacagcctgg gaacgctgtg
      961 gggcgaggcc atggccggcg cgccgcccga ggagcggctg accgccctgg tcgaggccca
     1021 tctcggcttt atcgaggccc atccggcggt gccgctggtg ctgctgtcgc ccgaattgca
     1081 ggcccgccac gccagcgtcc gccaggccac cgcccgcatg atggggctgt tccatgccca
     1141 actgagccgc gccctcgacg acggccgcca ggccggcgcg ttcgattccg gcctcgacgt
     1201 cgcccgcgcc gcctggatga tgatcgccct gatccagggc atcgccatcc gctggaccgc
     1261 cagccagggc cgcttcgaca tccgcgcgga aggcttggcc ctgatcggca tggcggtgcg
     1321 cggcatcgtc cgctaaaacc atcgccagcc accaaccggg aatactgcca tggccatgct
     1381 cgaccccgag agccgcaagc ggctcgtcgc ctacttctac gaagccttcg acgaagacaa
     1441 cgccggcagc atggaggcct tcgcccagaa cttcctgcac aacggcgccg tgttcgacct
     1501 ggtcgccgac aatttcccca aggcgaccat gtcggccgtg aagcaggcga tgatggaagc
     1561 ctatggcctg tgggaaaagg cgcgggccga ggagaaggaa gagggttaac cggccgctac
     1621 ggcgggcgtc agcaccggcg ccaacaaggg atgaatggtc ggggcgaagg gattgaccac
     1681 ggtgacgcca tgccaggtaa agccgtcctg gagatcctcg gacagcagca ggcggcagcg
     1741 ggcatcggcg gccacggcca gaatcagggc atcccagatc tgcaaaccat ggtcggccac
     1801 cagatccatg gccgacagca tggcctgatc ggtggtgtcg tgcaccggca tggcgtcgcg
     1861 ccaggacaga atggcggtgc gcacctcggc caccggacgc ctcaccttgg cggtcagcac
     1921 ccggaacagc tcgcccagaa cctggaccgg cagtatggcg ccgcccgtgg gaagggcggc
     1981 gatcaaatcc agcgccttgg cttgacgggc ggcatcattg gccccttcgg cataggcgag
     2041 gatattggtg tcgagggcga cgatcacccg ttggctccgt catcgtacag ctcgccccgt
     2101 cgccaggtcg ctccggccgg cgcctgggcg cgcagccggg tcagaagggc gcccttggcc
     2161 aagttctgat cgggcgcggc cgatgccgcc ggctggatgg tggcaaccgg attaccccgc
     2221 gaggtcacgg tgaccgtctc gccagcctgc acatcgcgca ggatgcggga gaaatggcgg
     2281 ttggcgtctg cggccgagat attgcgcatg gcgggcctcg tgcgggttcc aatggcgcca
     2341 ttatcggtgt tgccggcggc tggggcaagt gggatgtagt gaaatcacta ctccttgacg
     2401 gattcaggac gccttgcgcc cgagcgcgaa gccgctttcc agcgctgccg agagctggcg
     2461 ggcggtgacc ggtttgtgga tgaagcccag tcccagttcg gccgccttga gttccgcctc
     2521 gcggccggcc tcgccggtca gcacgatgcc cgggatggcg acgcccagcc ggcggcgtat
     2581 ccgcaggatg acgtcggtgc cgacctcgcc gccgcgcagg cggtagtcgg acaccaccat
     2641 gtcgggcgcc tcgccggtgc ggttcagttg ctccagcgcc tggtcgcccg agccggcgat
     2701 catcacccga tagccccagt tgcggaacag cgtctgcagc cccagcagca ccatggcgtc
     2761 gtcgtccacc agcagcacga gccggccgcc ggcctcggct cccggcctgg cctcggtcga
     2821 ggcggcgggc aacgcttgcc ccagcggcac ggtcacgcgg aagctcgacc cctgccccgg
     2881 cacggattgg acctcgacgg gatggttcag caggccggcc agccggcgga cgatggccag
     2941 gcccaggccg atgccctggc cacggtcgcg ctcggtgttg ccgacctggt ggaactcctc
     3001 ccagatgcgc tccagatgtt cggccgggat gccgatgccg gtatcctcga cggtgatggt
     3061 gacggcat
//
LOCUS       DATIKR010000624         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_33040, whole genome shotgun sequence.
ACCESSION   DATIKR010000624 DATIKR010000000
VERSION     DATIKR010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33040"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..>1797
                     /locus_tag="VLL76_09790"
     CDS             253..>1797
                     /locus_tag="VLL76_09790"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HSV29843.1"
                     /translation="MAYLFVLACGVVALLYGAFAIKSVMASPAGTPRMQEIAGAIQEG
                     AKAYLNRQYTTIATVGVVIAIILGIWLGIYQAIGFVLGAVCSGLAGYIGMHVSVRANV
                     RTAEAARSGGMQQALDVAFKSGAITGMLVVGLGLLGVAGYFTVLRGVIPAEHQRELIE
                     ALVALSFGASLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGD
                     NVGDCAGMAADLFETYAVTMVGTMVLASIFFTGVAQEQMMLFPLVVGAVCILASVVGS
                     FFVKLDASGKIMKALYKGLIVTGALSAALIAGIIVVGFGGFGASFDMAGRAVTGGNLF
                     VCALIGLGVTGLMVWITEYYTGTDFRPVKSVAAASQTGHGTNVIQGLAVSMESTALPV
                     LVICVAILLSYAVAGLFGIAIAATTMLALAGMIVALDAYGPVTDNAGGIAEMADLPKE
                     VRKTTDALDAVGNTTKAVTKGYAIGSAGLAALVLFAAYTEDLKHYFPNVKITFSLEDP
                     FVVVGLF"
BASE COUNT          289 a          594 c          566 g          348 t
ORIGIN      
        1 ctgccgtcaa gtgacgacta tgccgtgatt tacggcggtg cagcattcag tttagaacga
       61 ttgttctatt agggtcctct gatactttcc ataaagaggt accatcgcga gcaattcatt
      121 gccaaccccc tgatcttctg gcaacttttc aaggcttcgt ccgtcttcga cattccgacg
      181 ggtcgccaaa cccccgaggg aattcaggcg cgacaaagaa aagaacgaag cagctcaggg
      241 gatcgtacaa aaatggcata cctcttcgtc ctcgcctgcg gcgtggtggc cttgctctat
      301 ggagcattcg ccatcaagtc ggtcatggcg tcacctgcgg gtacaccgcg gatgcaggaa
      361 atcgccggtg ccatccagga aggcgccaag gcttatctca accgccaata cacgaccatt
      421 gccaccgtcg gcgtggtgat tgccatcatc ctcggaattt ggctcggtat ctaccaggcg
      481 atcggcttcg tgctgggcgc cgtgtgttcg ggcctggccg gctacatcgg aatgcacgtt
      541 tcggtccgcg ccaacgtccg caccgccgag gccgcccgca gcggcggcat gcagcaggcc
      601 ctcgacgtgg ccttcaagtc gggcgccatc accggcatgc tggtggtcgg cctcggcctg
      661 ctgggcgtgg ccggctattt caccgtgctg cgcggcgtca tccccgccga gcaccagcgt
      721 gagctgatcg aggcgctggt ggcgctgtcg ttcggtgcct cgctgatctc catcttcgct
      781 cgactgggcg gcggcatctt caccaagggc gccgacgtcg gtgccgacct ggtcggcaag
      841 gtcgaggcgg gcatccccga ggacgatccc cgcaatccgg ccgtgatcgc cgacaacgtc
      901 ggcgacaacg tgggcgactg cgccggcatg gccgccgacc tgttcgagac ctacgccgtg
      961 accatggtcg gcaccatggt gctggcctcg atcttcttca ccggcgtcgc gcaggaacag
     1021 atgatgctgt tcccgctggt ggtgggcgcg gtctgcatcc tggcctcggt ggtcggctcg
     1081 ttcttcgtca agctcgacgc atccggcaag atcatgaagg cgctttacaa gggcctgatc
     1141 gtcaccggcg cgctgtcggc ggcactgatc gccggcatca tcgtggtcgg cttcggcggc
     1201 ttcggcgcct cgttcgacat ggcgggcagg gcggtcaccg gcggcaattt gttcgtctgc
     1261 gccctgatcg gcctgggcgt caccggcctg atggtgtgga tcaccgagta ttacaccggc
     1321 acggatttcc gtccggtgaa gtcggtggcc gccgcctcgc agaccggcca cggcaccaac
     1381 gtcatccagg gcctggcggt gtcgatggaa tcgacggcgc tgccggtgct ggtgatctgc
     1441 gtcgccatcc tgctgtccta cgccgtcgcc ggcctgttcg gcatcgccat cgcggcgacc
     1501 accatgctgg cgctggccgg catgatcgtc gcgctcgacg cctatggccc ggtcaccgac
     1561 aacgccggcg gcatcgccga gatggccgac ctgccgaagg aggtccgcaa gaccaccgac
     1621 gcgctggacg ccgtgggcaa caccaccaag gcggtcacca agggctacgc catcggctcg
     1681 gccggcctgg ccgcgctggt cctgttcgcc gcctacaccg aggacctcaa gcactatttc
     1741 cccaacgtca agatcacgtt cagcctggaa gacccgttcg tggtggtggg cctgttc
//
LOCUS       DATIKR010000625         2960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_46276, whole genome shotgun sequence.
ACCESSION   DATIKR010000625 DATIKR010000000
VERSION     DATIKR010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46276"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..153
                     /locus_tag="VLL76_09795"
     CDS             10..153
                     /locus_tag="VLL76_09795"
                     /inference="COORDINATES: protein motif:HMM:NF013589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HSV29844.1"
                     /translation="METTLRSFPRADVEALKDDDGKVVVTCEFCRAEYSFEDKDLEKV
                     YMP"
     gene            214..810
                     /locus_tag="VLL76_09800"
     CDS             214..810
                     /locus_tag="VLL76_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29845.1"
                     /translation="MFARSSRLVLAVAAVLALGACQTKPPVQKLPEISFADKRPISLN
                     VAELRIEPAYQPPLKEPNVEHLMPVSPEAATVRWAQDRLRPMGAVGSGAARVVINDAK
                     VVRVSLKTDKGFTGLFKEEQAERYEGSLDIAVQILDQRNLPIADVVARATRVKTVPEG
                     VSPNERDRVLHELTETLMRDVDAQMDGLIQSYLGRWVM"
     gene            complement(931..2379)
                     /locus_tag="VLL76_09805"
     CDS             complement(931..2379)
                     /locus_tag="VLL76_09805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HSV29846.1"
                     /translation="MIDLRPVLRIVGIVLCVLAVAMAVPMLADLAARNGDWQAFLISG
                     GITLFMGLALVLGAQTERRHLDVRQTFLATTLAWVIPAFFAGLPFILGATGLTITDAV
                     FEATSGITTTGSTVIAGLDRLPAGILLWRGLLQWMGGIGIIVMAVAVLPVLNIGGMQM
                     FRVEITSASERAAPRAARVGVVIVSVYAGLTMLLYSALWLVGMPSFDALVHAMSTIAT
                     GGFSTYDTSMAHFDSARIDLVVFVGMIIGGMPFLLFFQAANGNWRAVLRDQQVHWYLG
                     LLALGGLAVTLWLVNSRGYGFLTALRHGVFTVTSVMTGTGLTTVDYSDWAGMPLGILF
                     FLTFVGGCAGSTAAGIKVFRFQFLLANALVQVRHLLRPHAVLIPTFNRKPISDEVLRS
                     VMGFLFVYALAFAVLAMALSFLGLDFVTAISGAASAISNVGPGIGPTIGPDSTFAPLP
                     DLAKWLLAAGMVFGRLEMFTILVLFVPTFWRQ"
     gene            complement(2387..>2960)
                     /locus_tag="VLL76_09810"
     CDS             complement(2387..>2960)
                     /locus_tag="VLL76_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HSV29847.1"
                     /translation="NDMDPFAALTHATFNVVSVVTTTGFASTDYSLWGGFAQVVFFVL
                     TFIGGCTGSTSGGVKIFRWEVLFAMAGVHLRRLLHPHGIFVIDFNRQRISDSVVESVL
                     GFVVVYFLTFAVMALVLTVVGLDFVTALTGSATALSNVGPGLGDIIGPAGNFKPLPDS
                     AKWILSFEMLLGRLELFTVLVLFTRSFWRG"
BASE COUNT          585 a          977 c         1006 g          392 t
ORIGIN      
        1 cacgagcggg tggagaccac cctgcgctcg ttcccgcgcg ccgatgtcga ggcgctgaag
       61 gacgacgacg gcaaggtcgt cgtcacctgc gagttctgcc gtgccgaata ttccttcgag
      121 gacaaggacc tggagaaggt ctacatgcct tgacggacgg ctggcgcgtg ccaaaatggg
      181 ccgcgacctc tccggaagtg ggattgccct gacatgttcg ctcgttcctc ccgcctggta
      241 ctggccgttg cggccgtgct cgccctcggc gcctgccaga ccaagccgcc ggtccagaag
      301 cttcccgaga tcagcttcgc cgacaagcgg cccatcagcc tcaatgtcgc cgagctgcga
      361 atcgagccgg cctaccagcc gccgctgaag gaacccaacg tcgagcatct gatgccggtg
      421 tcgcccgagg ccgccaccgt gcgctgggcc caggaccgcc tgcgccccat gggcgccgtc
      481 ggctcgggcg ccgcccgcgt cgtcatcaac gacgccaagg tggtgcgcgt gtcgctgaag
      541 accgacaagg gcttcaccgg cctgttcaag gaagagcagg ccgagcgcta cgaaggttcg
      601 ctggacatcg ccgtccagat cctggaccag cgcaacctgc ccatcgccga cgtcgtcgcc
      661 cgcgccaccc gcgtcaagac cgtgccggaa ggcgtcagcc ccaacgagcg cgaccgcgtg
      721 ctgcacgaat tgaccgaaac gctgatgcgc gacgtcgatg cccagatgga cggcctgatc
      781 cagtcctatc tcggccgctg ggtgatgtag ggctgcggcc gtccgtgcct gaaggatgct
      841 tcgctgcgct cagcatgaca aaccgtcggt gtcatcctga agcgaagccg aaaggttttt
      901 cagccgaggt ggcggccgtt gcccgacaac ctactgccgc cagaaagtcg gcacgaacag
      961 caccaggatc gtgaacattt ccaggcggcc gaacaccatg ccggccgcca gcagccattt
     1021 ggccagatcg ggtagcggcg cgaaggtgct gtcggggccg atggtcgggc cgatgccggg
     1081 gcctacgttc gagatggccg aggccgcacc cgagatggcg gtcacgaagt cgaggcccag
     1141 gaaggacagg gccatggcca gcaccgcgaa agccagcgcg tagacgaaca ggaaccccat
     1201 caccgaccgc aatacctcgt cgctgatggg cttgcggttg aaggtgggga tgagcacggc
     1261 gtggggtcgc agcaggtggc gcacctgcac cagcgcgttg gccagcagga actggaagcg
     1321 gaacaccttg atgccggccg ccgtcgatcc ggcgcagccg cccacgaagg tcaggaagaa
     1381 caggatgccc aggggcatgc ccgcccagtc gctgtagtcg acggtggtca ggccggtgcc
     1441 ggtcatcacc gacgtcaccg tgaagacgcc gtggcgcagc gccgtcagga agccgtaccc
     1501 gcggctgttg accagccaca gcgtcaccgc caagccaccc agcgccagca ggcccaggta
     1561 ccagtggacc tgctggtcgc gcagcacggc gcgccaattg ccgttggcgg cctggaaaaa
     1621 cagcaggaac ggcatgccgc cgatgatcat gccgacgaac accaccaggt cgatgcgggc
     1681 gctgtcgaaa tgcgccatcg aagtgtcgta ggtggagaag ccgccggtgg cgatggtgct
     1741 catggcgtgg accagggcgt cgaacgacgg catgcccacc agccacagcg cgctgtacag
     1801 cagcatcgtc aggccggcat agaccgagac gatgaccacg ccgacacgcg ccgcgcgcgg
     1861 cgccgcccgt tccgacgccg aggtgatctc gacccggaac atctgcatgc cgccgatatt
     1921 cagcaccggc agcaccgcca ccgccatcac gatgatgccg atgccgccca tccattgcag
     1981 caggccgcgc cacaacagga tgccggcggg cagccggtcg aggccggcga tgacggtcga
     2041 gccggtggtg gtgatgccgc tggtggcctc gaacaccgcg tcggtgatgg tcaggccggt
     2101 ggcgcccagg atgaacggca gcccggcgaa gaacgccgga ataacccagg ccagggtagt
     2161 ggccaggaag gtctggcgga cgtcgagatg gcgccgttcg gtctgggcgc ccagcaccag
     2221 cgccaggccc atgaacagcg tgatgccgcc cgagatcagg aaggcctgcc agtcgccgtt
     2281 gcgggcggcc agatcggcca gcatgggcac cgccatcgcg acggcgagca cgcacaagac
     2341 gatgccgacg atgcgcagga cgggacgaag gtcgatcatg gccggctcat ccccgccaga
     2401 aggaacgcgt gaacagcacg agcaccgtga acaactcgag gcggccgagc agcatctcga
     2461 acgacaggat ccacttggcg ctgtcgggca gcggcttgaa attgccggcc gggccgatga
     2521 tgtcgcccag gccggggccg acgttggaca gcgccgtggc cgacccggtg agggcggtga
     2581 cgaagtcgag gccgaccacc gtcagcacca aggccatcac cgcgaaggtc aggaagtaca
     2641 ccaccacgaa gcccaacacc gattccacca ccgaatcgga aatgcgctgg cggttgaagt
     2701 cgatgacgaa gatgccgtgc gggtgcagca gacggcgcag atgcacgccg gccatggcga
     2761 acagcacttc ccagcggaag atcttgacgc cgcccgaggt cgagccggtg cagccgccga
     2821 tgaaggtcag cacgaagaac accacctggg caaagccgcc ccacaggctg tagtcggtgg
     2881 aggcgaagcc ggtggtggtc accaccgaga cgacgttgaa ggtggcgtgg gtgagcgcgg
     2941 cgaacgggtc catgtcgttg
//
LOCUS       DATIKR010000626         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_202893, whole genome shotgun sequence.
ACCESSION   DATIKR010000626 DATIKR010000000
VERSION     DATIKR010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202893"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VLL76_09815"
     CDS             complement(<1..778)
                     /locus_tag="VLL76_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HSV29848.1"
                     /translation="MANRLSGETSPYLLQHKDNPVHWWAWGPEALAEARTANKPILLS
                     VGYAACHWCHVMAHESFENDAIAARMNDLFINIKVDREERPDLDAIYQQALSMMGQHG
                     GWPLTMFLTPDGEPFWGGTYFPPNARYGRPGFPDVLAAVADAWANHPDKVRENVTALM
                     DGLEHEAATPGGAEITIGMLDVGARHLLGAVDTVHGGLQGAPKFPQPGLFDFLWRGYL
                     RTGDKSLRDAVTLTLERMSYGGIYDHLGGGFMRYSTDELWL"
     gene            871..1116
                     /locus_tag="VLL76_09820"
     CDS             871..1116
                     /locus_tag="VLL76_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6489 family protein"
                     /protein_id="HSV29849.1"
                     /translation="MKITVDVDCTPEEARTFLGLPDVKPMQDAVMAQVQDRMVSALNA
                     MDPETMVKTWLPAQVQGMEQLQKMFWSQFAGGGRREK"
     gene            1119..1478
                     /locus_tag="VLL76_09825"
     CDS             1119..1478
                     /locus_tag="VLL76_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HSV29850.1"
                     /translation="MTSLPGDPAPYFAIHVFACTNRRPEGHRRGSCAARGSEELRDYM
                     KARAKEMGVPDLRINSAGCLDRCELGPVMVIYPDGIWYRYASHDDVDEILRVHVAEGG
                     RVERLMLRPEDGPPKKG"
     gene            1602..>1838
                     /locus_tag="VLL76_09830"
     CDS             1602..>1838
                     /locus_tag="VLL76_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HSV29851.1"
                     /translation="MTDTIFALASGPGRAGVAVFRLSGPQAGHALRALSGRDLPAARK
                     AVRVRLTYRGELIDDGLALWFPAPASFTGEDVVEL"
BASE COUNT          302 a          583 c          643 g          310 t
ORIGIN      
        1 ccagccacag ctcgtcggtg gaatagcgca tgaagccgcc gcccagatgg tcgtagatgc
       61 cgccatagga catgcgctcc agcgtcagcg tcaccgcgtc gcgcagcgat ttgtcgccgg
      121 tgcgcaagta tccccgccac aggaaatcga acaggcccgg ctgcgggaat ttcggcgcgc
      181 cctgcaggcc gccatggacg gtgtcgacgg cgccgagcag atggcgggcg ccgacgtcga
      241 gcatgccgat ggtgatctcg gcgccgccgg gggtggcggc ctcgtgctcc aggccgtcca
      301 tcagcgcggt gacgttctcg cgcaccttgt cgggatggtt ggcccaggcg tcggcgacgg
      361 cggccagcac gtcgggaaag ccggggcggc catagcgggc gttgggcggg aaataggtgc
      421 cgccccagaa cggctcgccg tcgggggtca ggaacatggt cagcggccag ccgccgtgct
      481 ggcccatcat gctaagggcc tgctgataga tggcgtcgag atcggggcgt tcctcacggt
      541 cgaccttgat gttgatgaac aggtcgttca tgcgggcggc gatggcgtcg ttctcgaagc
      601 tctcatgcgc catcacgtgg caccagtggc aggcggcata gcccaccgac agcaggatgg
      661 gcttgttggc cgtcctagcc tcggccaggg cttcgggacc ccaggcccac caatggacgg
      721 ggttgtcctt gtgctgcagc agataggggc tggtttcgcc ggagaggcgg ttggccatgg
      781 ggggtattcc ctgtgtgtcg gcattgcgcg tggcgtgtca aaggcttagt ttggatcgcc
      841 gacgccgaaa cgcaagctgt ggggccaacg atgaagatca ccgtcgatgt tgactgcacc
      901 cccgaggaag cccgcacctt cctgggcttg cccgacgtca agcccatgca ggacgccgtg
      961 atggcccagg tgcaggatcg catggtcagc gcgctgaacg ccatggatcc cgagaccatg
     1021 gtcaagacct ggctgccggc ccaggtccag ggcatggagc aattgcagaa gatgttctgg
     1081 tcgcaattcg ccggcggcgg ccgacgggag aagtaagagt gaccagcctg ccgggcgatc
     1141 ccgcccccta tttcgccatc cacgtcttcg cctgcaccaa ccgccgcccc gaaggccacc
     1201 gccgtggctc gtgcgccgcc aggggttccg aggaattgcg cgactacatg aaggcccgcg
     1261 ccaaggaaat gggcgtgccg gatcttcgca tcaattcggc cggctgcctg gaccgctgcg
     1321 agctgggccc ggtgatggtg atctatcccg acggcatctg gtaccgctat gccagccacg
     1381 acgacgtcga cgagatcctg cgcgtccacg tcgccgaggg cggccgcgtc gagcgcctga
     1441 tgctgcgccc cgaggacggc ccgccgaaga agggctgaaa tttcaccacc aagacaccaa
     1501 gacaccaaga tgcccgaggc gtggcgaagg tcttgccacc cggccggtat cttggtgtcc
     1561 ttggtgtctt ggtggtttta aaccatggtc ggaaccgggt gatgactgac accattttcg
     1621 cattggcaag cgggccgggc cgggccggcg tggcggtatt ccggctgtcg gggccgcagg
     1681 cggggcacgc cctgagggcg ctgtcggggc gcgacctgcc ggccgcgcgc aaggccgtcc
     1741 gtgtccgcct cacctatcgc ggcgaattga tcgacgacgg cctggccctg tggttccccg
     1801 cgcccgccag tttcaccggc gaggatgtgg tcgaattg
//
LOCUS       DATIKR010000627         3672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_9609, whole genome shotgun sequence.
ACCESSION   DATIKR010000627 DATIKR010000000
VERSION     DATIKR010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9609"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            797..2821
                     /locus_tag="VLL76_09835"
     CDS             797..2821
                     /locus_tag="VLL76_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018208142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29852.1"
                     /translation="MGGLGGGITSAVNNWGALNLGTSTGLAPMAVTTGGEMVSIAGTM
                     TGPGGELLAVTTAGDIVPAAGTIAGSTGLTMMEWLGIGGIALGNILAWSQSPEMGMWT
                     TGGTAAGAAIGSIFPGVGTILGAGIGATAGSLLGGLFGGKSQPKEGRVPGAAWTNIGV
                     LDGKLVYGAGDAQMGNLQLGVAYASGDGGGPEISASVKTSAEQLIAAIEKAMQLLGLE
                     ADVSTNRALIGLGGGWLGNPNLQHYMGAVGGQANIYTEPEKALLAILRSDYVKADGSL
                     VSRAIDASKATTLDDFSADVEFAQGLQRAMDALDPAANTLQKQLQALRDAAEDSVLKG
                     IEPLLEALSRAKDLGMESEWRTVTEASIRRQFEDLAPAEELTNTEKLLAQIAGQFEGL
                     AEIVDRLDLSITQAELDGFKQAAIVKVREGFNTSIADQLLAITDPNALKLREWERWAD
                     ALRREAEASGADLVEVEELIAARRLAIVKDEQAAIERMGTSVKEWLERQLLGDTSTLS
                     VPAKLTEAQSQFAATVAAVRGGDDSAMGAITGKADALIGILQQMYGSTADYATQVDWV
                     RSTVSTLMHERGVPGFAIGTSSAPAGWAWVGEHGRELVRFRGGEEVIPAAASAALVGT
                     RSGGEIRALLRAQAEQGMEIRALRRDLRESGERQERALAAVERLARRQAA"
     gene            2818..>3672
                     /locus_tag="VLL76_09840"
     CDS             2818..>3672
                     /locus_tag="VLL76_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29853.1"
                     /translation="MIPGLTPSAVAAIATLPPGYSEAVGNPFRAVLSEPGAQLVYLVK
                     AMPRDPDARISVPGWPGPVAAGPVTGPAVYRGGGVAIYWGSQHYLTEPTDVPSSTLWR
                     GVLQQPYSAEMRLFGGTDPFGAAESGFGSVVALNGDGDYDAVTGYNWAGAAIEILVGG
                     AGRPLSDFAVVARPEGDGLGWDRERIELRLRDRLRILSRSVARRVYTGAGGVDGAAAI
                     AGQPAPLCYGQVRHAPLKMIDPVALLLQAHDGPIHAVAAVYERGLAFPPAVADYPTPA
                     ALLSADVPA"
BASE COUNT          588 a         1166 c         1360 g          558 t
ORIGIN      
        1 ggcggcgcgg cgcgcccagg ccgataccga gttgctgcag ggactgacgc aggaatggca
       61 ggcgacggtg cttctggccg acgcccaggg caagggcgcc gccgccatcg ccgaggccaa
      121 catccagtcg caggcggcgg cactggcgct gaaaggccac ggtcaggagg ccatcgccac
      181 ggcggtcgcc atcatgcgcc tgaccgaggc cgagcgggtg cgcggcaatc tggccgtcat
      241 cgaccgcaac caaagccgcg atctgcagca gctggagacc gaactgcgcc tggtcggcgc
      301 caccgtcgag cagcgggaat acgaattggc gctgctggag atgcgccacg agctggagga
      361 tgccggcgtc aaggacgtcg aggccgagct tgaggcgcgc aagtcggtgg cggccgccat
      421 cgccaccaag cgggccgagc tgaccaaggc ccaggaagct gccaaggaat ggcagcggct
      481 gtgggagcat gccggcgaga agatacagga cgcgttggcc ggcgcgttca agggggcgct
      541 gagcgggtcg ctcaacacct ttgccgactt ccgccgggcg gtggtcgacc tgatgatgga
      601 gatggcggcg cagatcgccg ccatgctggt gttccggccg gtggtcggtg gggtggtcaa
      661 cgcgctgggt ttcggggcgg cctcgggcgt cgcgggcgcc gtttccgggg ctggcggtgc
      721 cggtgggctg gcgggtgccg ccgccggcgg cgtgtcgccc atgcaggcgg gttcgctggg
      781 ctatcaactg ggcggcatgg gcgggctggg cggcggcatc acgagcgccg tcaacaattg
      841 gggcgcgctc aaccttggta cctccaccgg cctggcgccc atggcggtca ccaccggcgg
      901 agagatggtc agcattgccg gcaccatgac cggtcccgga ggcgagttgc tggccgtgac
      961 cacggccggc gacatcgtgc cggcggcggg caccatagcc ggctcgaccg gcttgaccat
     1021 gatggagtgg ctgggcattg gcggcatcgc cctgggaaac atcctggcgt ggtcgcagtc
     1081 acccgagatg ggcatgtgga ccacgggtgg cactgccgcc ggtgcggcca ttggctcgat
     1141 ttttccaggc gtcgggacga tcctcggcgc tggtattggc gcgaccgccg gcagcctgtt
     1201 ggggggcctg ttcggcggaa aaagccagcc aaaagaggga cgcgtaccgg gagccgcatg
     1261 gaccaacatt ggcgtcctcg acggcaagct tgtctatggc gccggcgacg cccagatggg
     1321 gaacctgcag cttggcgtgg cctatgcctc cggtgacggc ggtggacccg agatttcggc
     1381 cagtgtcaag acgtcggcgg agcaattgat cgcggccatc gagaaggcca tgcagttgct
     1441 ggggctcgaa gccgacgtca gcaccaaccg cgcattgatc gggcttggtg gtggctggct
     1501 gggcaatccc aacctgcaac attacatggg cgcggttggt ggccaggcca acatctacac
     1561 cgagccggaa aaggcgttgc tcgcaatcct gcgatccgat tacgtcaagg ctgacggatc
     1621 gctggtgtcg cgcgcgatcg atgccagcaa agccaccacg ttggatgact tctcggccga
     1681 cgtggagttc gcgcagggct tgcagcgcgc gatggatgct cttgatccgg cggcaaacac
     1741 cctgcagaag caattgcagg cgctgcgcga cgcggccgaa gactctgtcc tgaaaggcat
     1801 cgagcctttg cttgaagcgc tgtccagggc aaaggacctg ggcatggaaa gcgagtggcg
     1861 cacggtcacc gaggcaagca tccgacggca gttcgaggat ctggcgccgg cggaggagtt
     1921 gaccaacacc gaaaagctgc ttgcccagat agccgggcaa ttcgagggcc tggccgaaat
     1981 cgtcgatcgg cttgacctgt caatcaccca ggccgagctg gacggtttca agcaggccgc
     2041 catcgtcaag gttcgcgagg gcttcaacac atcgattgcg gaccaattgc tggccatcac
     2101 cgatcccaac gcgctgaagc tgcgcgagtg ggaacgatgg gcggacgccc tgcgccgcga
     2161 ggccgaggcc tccggcgccg acctggtgga ggttgaggag ctgatcgccg ctaggcggct
     2221 ggccatcgtc aaggacgaac aggcggccat cgaacgcatg ggcaccagcg tcaaggagtg
     2281 gctggaacgc cagttgcttg gcgatacctc cacattgtcg gtgcccgcga aactgaccga
     2341 ggcgcagtcg caattcgccg ccacggtggc ggcggtgcgc ggaggcgacg acagcgccat
     2401 gggcgccatc acaggcaagg ccgacgcgct gatcggcatc ctgcagcaga tgtacggctc
     2461 gaccgcagac tacgcgaccc aggtcgactg ggtgcggtcg acggtatcca ccctgatgca
     2521 cgaacgcggc gtccccggct tcgcgatcgg cacgtcgtcg gcgccggcgg ggtgggcctg
     2581 ggtcggcgag catggccgcg agctggtccg cttccgtggg ggcgaagagg tcatcccggc
     2641 cgctgcatcc gccgcccttg tcggaacgag gtccggcggc gaaatccgcg ccctattgcg
     2701 ggcacaggcc gaacagggca tggagatcag ggcgttgcgc cgggatctgc gcgaatccgg
     2761 cgagcgccag gagcgggcgc tggctgccgt cgagcgcttg gcccggaggc aggcggcatg
     2821 atccccggcc tgacaccgtc ggccgtcgcg gcgatcgcga cgctgccgcc cggctacagc
     2881 gaggcggtgg gcaacccgtt ccgcgcggtg ctgtccgaac ctggcgccca gttggtgtat
     2941 ctggtcaagg ctatgccgcg agaccccgat gccaggatca gcgtgccggg gtggcccggc
     3001 cccgtcgccg ccggccccgt caccggcccg gcagtctata ggggtggcgg cgtagcgatc
     3061 tattggggca gccagcatta cctgacagag ccgaccgacg tgccgtccag cacgctgtgg
     3121 cgcggggtgc tgcagcagcc ctattcggcg gagatgaggc tgttcggggg cacggacccg
     3181 ttcggcgccg ccgaatccgg tttcgggtcc gtcgtggctc tcaacggcga cggcgattac
     3241 gacgccgtga ccggctacaa ctgggcgggc gccgccattg agatcttggt gggcggtgcc
     3301 ggccgcccat tgtccgattt cgccgtggtg gcgcggccgg agggcgacgg ccttggctgg
     3361 gaccgcgagc gcatcgagct gcgcctgcgc gaccgcctgc ggatcctgtc gcgcagcgtg
     3421 gctcggcgcg tctacaccgg cgccggcggc gtcgatggtg ccgccgcaat tgccggccag
     3481 ccggcgccgc tgtgttatgg ccaggtgcgg catgcgcccc tgaagatgat cgaccccgtg
     3541 gcgctgctgc tgcaggcgca tgacggccca atccatgccg tggcggctgt ctacgagcgt
     3601 ggcttggcgt tcccgccggc ggtggcagat taccccacgc cggcggcgct gctgtccgcc
     3661 gacgtgccgg cc
//
LOCUS       DATIKR010000628         6583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_179244, whole genome shotgun sequence.
ACCESSION   DATIKR010000628 DATIKR010000000
VERSION     DATIKR010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 6583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6583
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179244"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..323
                     /locus_tag="VLL76_09845"
     CDS             129..323
                     /locus_tag="VLL76_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29854.1"
                     /translation="MDEAEFELEMARLGFTEQLDASTCLVAWYNPRLKIQKILSRPRN
                     MSDASRARFIEQLRKDLNLA"
     gene            397..687
                     /locus_tag="VLL76_09850"
     CDS             397..687
                     /locus_tag="VLL76_09850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29855.1"
                     /translation="MRSLLGVAAFVMGLLVALPAFAEWRFEFRNGPDPRMYRSYRAYD
                     PFGMPFGYMNQPRQRCWVEVRRDIFGYSEVRRCRPARGHGYGRPPGFMWDLD"
     gene            759..1607
                     /locus_tag="VLL76_09855"
     CDS             759..1607
                     /locus_tag="VLL76_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29856.1"
                     /translation="MDLNVVLEVAIGLTLMYLLLSLFVTVVNEAISRSLGIRASNLHD
                     GLDRIMGKETKQGFDEMPLVKSIAQASGTHLYDHLPKETYVQGVVQQLRAAGALVDGA
                     TDVISAGIDKLPDGNFKDVLSHAKTRAGTDVAAFEEHLGSWFDSAMAHVRAAYQRKLH
                     LVSLLVGIALATFLNADTFHVANVLWKDPTVRQSVVTTAEGVVAKPAVDDKGNVLIGP
                     DEIRANLTSLPIGWGPGAVARFKAAPFSTFFGWLFTGLALALGAPFWFGLLSKFINIR
                     ASANKS"
     gene            1736..3289
                     /gene="guaA"
                     /locus_tag="VLL76_09860"
     CDS             1736..3289
                     /gene="guaA"
                     /locus_tag="VLL76_09860"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HSV29857.1"
                     /translation="MTDRVLIIDFGSQVTQLIARRVRESGVYCEIHPFNRVTADSLKA
                     YGPKAIILSGGPASVADIGTPRAPDAVFTMGVPVLGICYGQQTMCDQLGGKVEPGDHR
                     EFGRAYVDVKDDCALFHGVWDKGGREQVWMSHGDRVTALPPGFRVVGTSEGAPFAAIA
                     NDDKRFYGVQFHPEVVHTPHGAQLLKNFTHAVAGCSGDWTMAAFKHQAIQAIRDQVGK
                     GRVICGLSGGVDSSVVAALIHEAIGDQLTCVYVDHGLMRLGESEQVVSVFRDRFNINL
                     VHRDASDLFLGRLAGMTDPEKKRKTIGALFIDVFEEEANKIGGADFLAQGTLYPDVIE
                     SVSFIGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELGLPDEMVGRH
                     PFPGPGLAIRIPGQEITREKLEILKKADSIYLEEIRNAGLYDAIWQAFTVLLPVRTVG
                     VMGDSRSYDYACALRAVTSTDGMTADFYHFDMEFLGRVANRIINEVKGINRVTYDITS
                     KPPGTIEWE"
     gene            complement(3451..5214)
                     /locus_tag="VLL76_09865"
     CDS             complement(3451..5214)
                     /locus_tag="VLL76_09865"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV29858.1"
                     /translation="MIRATDDHALAPEMICLVRMPAVESFRFATTSVTPPLGLAYVAA
                     AIEASGRKVCVIDAVAEAPTATRAYLRGYLIGLAVEDVVARVPAEAKVVGISVIFTHE
                     WPAAVRLISLLRAARPDVTIILGGEHVSAMPEFCLSTAPADIAVMGEGEETIVHLLDA
                     LDKGEDITAIPGTAARKGNRIVVNPRRPRRTDIDSIPWPAWHHFDLETYHRHRFVGGM
                     DSDHVTVPILATRGCPYQCTYCASVRMWSPRWIPRDPITVVDEIEHYVRKFGARNFPF
                     QDLTAILKKDWIIAFCQEVERRGLEITWLLPTGTRLEAVDREVAVLLKRSGMVSMAFA
                     PESGSDTTRRLVRKKMGADALYEAIGAAGSAGLNVALFLVVGFPHETPEHLAENYPFV
                     DRLRETPVNDLSVTSYMALPGTELFDNLYDSGKLAIDRGWFRHILDGNALMPSRTYSP
                     FVTPFDILRIKLGLYWRFYGRRRPGAPQKSLAVRIGEIVGGWGKRKHASRLQTAVMNG
                     MRGALTTMLVTFGKRWMPRAEEERMIAGWDAIFADIRRQKQAAGATEPAPADSAELHR
                     RNIVSLVRHEHEAAYEISLTR"
     gene            complement(5271..6545)
                     /locus_tag="VLL76_09870"
     CDS             complement(5271..6545)
                     /locus_tag="VLL76_09870"
                     /inference="COORDINATES: protein motif:HMM:NF019237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1566 domain-containing protein"
                     /protein_id="HSV29859.1"
                     /translation="MKTGVLSAIFLLSALPAWAGDRSYPIVDTSQNTCFDDRGRAACP
                     SAGAPFHGQDGQVAGTRPSYRDNGDGTVTDLVTGLMWQKDFSRTSWTDAPNLAAAART
                     GGHSDWRVPTIKELYSLMDFSGATGTMRGGFGGGAPSDARPYLDTSVFAFEYPRQGRF
                     IDAQYVSATDYRGIVMGRDRAFFGVNFADGRIKGYPQNGGPGGRLWYARLVRGNPDYG
                     RNDFADNRDGTVTDRATGLTWMQADSGKGMNWQQALAFCEGLDLAGHSDWRLPNAKEL
                     HSIVDYSRSPDATASAAIDPVFQITAISERDGSRNWPYFWTSTSHQDGPRPGDFGVYF
                     AFGKAMGNIGQGGGMGGPMMGGPPGMGRPPGPPGMGMQQQAGPLTLLDVHGAGAQRSS
                     PKSGDEASLPVGHGPQGDVLRIYNFARCVRGG"
BASE COUNT         1058 a         2190 c         2230 g         1105 t
ORIGIN      
        1 tggcctgccg ccttcgcctg catcaagagc ccaaggtcct gccgtcgctc cgccccggcc
       61 cggtgcaaca ggtcaacaac acgtgggtgc tccttttccg atcggcgcct gatttcggct
      121 gagccggcat ggacgaagcc gaattcgaac tggagatggc gcggctgggg ttcaccgaac
      181 aactggacgc atcgacctgt ttggtggctt ggtacaaccc ccgcctcaag atccagaaaa
      241 tcctgtccag gccccgcaac atgtccgatg ccagccgggc tcgtttcatc gagcaactgc
      301 gcaaggacct caatctcgct taaaatccgc cttcgattag ccacatgcgt gggcgaccat
      361 cccttctgac gatcttgtcg gcctcaggag aggatcatgc ggtcgctgtt gggtgtggct
      421 gctttcgtta tgggcctgct ggtggctttg ccggcttttg ccgagtggcg gttcgagttc
      481 cgcaacgggc cggacccgcg catgtaccgc tcataccggg cctacgatcc gttcgggatg
      541 ccgttcggat acatgaacca gccgcgtcaa agatgctggg tcgaggtgcg ccgcgacatc
      601 ttcggctaca gcgaggtccg ccgctgccgg ccggcgcgcg gccacggtta cgggcgcccg
      661 ccgggcttca tgtgggacct ggattagatt tcccgctccc attgtggaaa aaatgaaatt
      721 cgctaccatg caggctcatc ctttcagggg aggggggaat ggacctgaat gtcgtgctcg
      781 aggtcgccat cggcctcaca ttgatgtacc tgctgctcag cctgttcgtc acggtggtca
      841 acgaggccat cagccgtagc ctcggcatcc gcgccagcaa cctgcatgac ggcctggacc
      901 gcatcatggg caaggagacc aagcagggat tcgacgagat gccgctggtc aagtcgatcg
      961 cccaggccag cggcacccat ctttacgacc acctgccgaa ggagacctac gtccaggggg
     1021 tggtgcagca actgcgggcc gccggagccc tggtcgacgg cgccaccgac gtgatctcgg
     1081 ccggcatcga caagctgccg gacggcaatt tcaaggacgt gctgtcgcac gcaaaaaccc
     1141 gggccggcac cgacgtcgcc gctttcgagg aacatctcgg cagctggttc gattccgcca
     1201 tggcccacgt gcgggcggct tatcagcgca agctgcacct ggtgtccctg ctggtcggca
     1261 tcgccctggc gacctttctc aacgccgaca ccttccacgt cgccaacgtg ctgtggaagg
     1321 accccaccgt gcgccagtcg gtggtgacca ccgccgaagg cgtggtcgcc aagccggcgg
     1381 tggacgacaa gggcaatgtc ctgatcgggc ccgacgagat ccgtgccaac ctgacctcgc
     1441 tgcccatcgg ttggggaccg ggagcggtgg ccaggttcaa ggctgcgccg ttctccacct
     1501 tcttcggctg gctgttcacg ggcctcgccc tggccctggg ggcgccgttc tggttcggcc
     1561 tgctgtccaa gttcatcaac atccgcgcca gcgccaacaa gtcgtgacgc ggagaggcgg
     1621 cccccgggcg gggctgcctc tcccattttt cctatcgctt ccgggtgcgg cgaccttgcc
     1681 gctgggttaa gcgggcgtta aagtccgggc caatccttga agcctggggc atcccatgac
     1741 cgaccgcgtc ctcatcatcg atttcggttc gcaagtcact cagctgatcg ctcggcgcgt
     1801 ccgcgaaagc ggcgtctatt gcgagatcca tccgttcaac cgcgtcaccg ccgacagcct
     1861 caaggcctat ggccccaagg cgatcattct gtcgggcggc ccggcctcgg tggccgacat
     1921 cggcacgccg cgcgctcccg acgcggtgtt caccatgggc gtgccggtgc tgggcatctg
     1981 ctatggccag cagaccatgt gcgaccagtt gggcggcaag gtcgagccgg gcgaccatcg
     2041 cgagttcggc cgcgcctatg tggacgtcaa ggacgactgc gccctgttcc acggcgtgtg
     2101 ggacaagggc ggccgcgagc aggtgtggat gagccacggc gaccgcgtca ccgccctgcc
     2161 ccccggcttc cgcgtcgtcg gcacctccga gggcgcgccg ttcgccgcca tcgccaacga
     2221 cgacaagcgc ttctacggcg tccagttcca ccccgaggtg gtgcacaccc cgcacggcgc
     2281 ccagttgctg aagaacttca cccatgcggt ggccggctgt tccggcgact ggaccatggc
     2341 ggcgttcaag caccaggcga tccaggccat ccgcgaccag gtcggcaagg gccgggtgat
     2401 ctgcggcctg tcgggcggcg tcgattccag cgtggtcgcg gccctgatcc acgaggccat
     2461 cggcgaccag ctcacctgcg tctacgtcga tcacggcctg atgcgcctgg gcgagtcgga
     2521 gcaggtggtc agcgtcttcc gcgaccgctt caacatcaac ctggtgcatc gcgacgccag
     2581 cgacctgttc ctcggcaggc tggccggcat gaccgacccc gagaagaagc gcaagaccat
     2641 cggcgccctg ttcatcgacg tgttcgagga agaggcgaac aagatcggcg gcgccgactt
     2701 cctggcccag ggcacgctgt accccgacgt catcgaatcg gtgtcgttca tcggtggccc
     2761 cagcgtcacc atcaagagcc accacaatgt cggcggcctg cccgagcgca tgaacatgaa
     2821 gctggtcgag ccgctgcgcg aactgttcaa ggacgaggtc cgcgcgctcg gccgcgaact
     2881 cggcctgccc gacgagatgg tcggccgcca ccccttcccc ggccccggcc tcgccatccg
     2941 catccccggc caggagatca cccgcgagaa gctggagatc ctgaagaagg ccgattccat
     3001 ctatctggaa gagatccgca acgccggcct ctacgacgcc atctggcagg ccttcaccgt
     3061 cctgctgccg gtccgcaccg tgggcgtgat gggcgattcc cgctcctacg actacgcttg
     3121 cgcgctgcgc gccgtgacca gcaccgacgg catgacggcc gacttctacc acttcgacat
     3181 ggaattcctc ggccgggtgg cgaaccgcat catcaacgag gtcaagggca tcaaccgcgt
     3241 gacctacgac atcacctcga agccgccggg gaccatcgag tgggagtgac gtgatctacc
     3301 cctgtcccgc ttgtgggaga gcgtggcccg cagggccggg tgaggggccg cgcccgaggt
     3361 ggtgccggtt cgccctcacc ctcccattgc tgcgcaatgg gcccctccct ctcccgcaag
     3421 cgggcgaggg acaaaccaac ccctctcccg ctagcgggtg agggaaattt cgtaagcggc
     3481 ttcgtgttcg tgccgcacca ggctgacgat gttgcggcgg tggagttcgg cgctgtcggc
     3541 gggggccggt tcggtggcgc cggcggcttg tttctggcgg cggatgtcgg cgaagatggc
     3601 gtcccagccg gcgatcatcc gttcctcttc ggcgcgcggc atccagcgct tgccgaaggt
     3661 caccagcatg gtggtcaagg cgccgcgcat gccgttcatc accgccgtct gcagccgcga
     3721 cgcatgcttg cgcttgcccc agccgccgac gatctcgccg atacggacgg ccagggattt
     3781 ctgcggcgcg ccgggacggc ggcggccata gaagcgccag tacaggccca gcttgatgcg
     3841 caggatgtcg aacggcgtca cgaacgggct gtaggtgcgg ctgggcatca gcgcgttgcc
     3901 gtccaggatg tggcggaacc agccgcgatc gatggcgagc ttgcccgaat cgtagaggtt
     3961 gtcgaacagc tcggtgcccg gcagcgccat gtacgaggtc accgacaggt cgttgaccgg
     4021 ggtttcgcgc aagcggtcga cgaacgggta gttctcggcc aggtgttcgg gcgtctcgtg
     4081 cgggaagccg accactagga acaatgcgac gttcaagccg gcggagccgg cggcgccgat
     4141 ggcctcgtac agcgcgtcgg cgcccatctt cttgcgcacc agccggcggg tggtgtccga
     4201 gccggattcc ggcgcgaacg ccatgctgac catgcccgag cgcttcagca gcacggcgac
     4261 ctcgcggtcc accgcctcga ggcgggtgcc ggtgggcagc agccaggtga tttccagacc
     4321 ccggcgctcg acctcctggc agaaggcgat gatccagtcc ttcttcagga tggcggtcag
     4381 gtcctggaac gggaagttgc gggcgccgaa cttgcggacg taatgctcga tctcgtccac
     4441 cacggtgatg ggatcgcgcg ggatccagcg cggcgaccac atgcggaccg aggcgcaata
     4501 ggtgcattgg tacggacagc cgcgcgtcgc caggatgggc acggtgacgt ggtcgctgtc
     4561 catgccgccg acgaagcggt ggcggtgata ggtctccagg tcgaaatggt gccaagccgg
     4621 ccagggaatg gaatcgatgt cggtgcggcg cggacggcgg ggattgacca cgatccggtt
     4681 gcccttgcgg gcggcggtgc ccgggatcgc ggtgatgtcc tcgcccttgt ccagggcgtc
     4741 cagcagatgg acgatggtct cctcgccctc gcccatcacg gcgatgtcgg caggcgcggt
     4801 ggacaggcag aattccggca tggccgagac gtgctcgccg cccaggatga tcgtcacgtc
     4861 cggccgcgcc gcccgcagca acgagatcag ccgcaccgcc gccggccatt catgggtgaa
     4921 gatgacgctg atgccgacga ccttggcctc ggccgggacg cgtgcgacca cgtcctcgac
     4981 cgccaggccg atcaggtagc cgcgcagata ggcccgcgtc gcggtcggcg cctcggccac
     5041 cgcgtcgatc acgcacacct tgcgcccgct ggcctcgatg gcggccgcga cataggccag
     5101 gccgagcggc ggcgtgaccg acgtggtcgc gaaccggaag ctctccacgg cgggcatgcg
     5161 gacaagacaa atcatttcgg gggccagtgc gtgatcatcg gtggcccgga tcatcttgat
     5221 gcggccttcg gccgtcaata gctgaaacgg gcgccgctag gcccgctgaa tcagccccct
     5281 cgcacgcacc gtgcgaagtt gtaaatcctg agcacgtcgc cttgggggcc gtggcccacc
     5341 ggcaggctcg cctcgtcacc cgacttgggg ctggagcgtt gggcgccggc gccgtggaca
     5401 tcgagcaggg tcagcgggcc cgcctgctgc tgcattccca tgcccggcgg tcccggcggg
     5461 cggcccatac cgggagggcc tcccatcatc ggcccaccca tgccgccgcc ctggccgatg
     5521 ttgcccatgg ccttgccgaa ggcgaaataa accccgaagt caccggggcg ggggccgtcc
     5581 tggtggctgg tcgaggtcca gaaatagggc cagttgcggc tgccgtcgcg ttcgctgatg
     5641 gcggtgatct ggaacaccgg gtcgatggcg gcgctggcgg tggcgtcggg cgagcgggaa
     5701 taatcgacga tgctgtgcag ttccttggcg ttgggcaggc gccagtcgga atggccggcc
     5761 aggtccaggc cctcgcagaa agccagggcc tgctgccagt tcatgccctt gccgctgtcc
     5821 gcctgcatcc aggtcaggcc ggtggcgcgg tcggtgaccg tgccgtcgcg gttgtcggcg
     5881 aagtcgttgc ggccgtaatc ggggttgccg cgcaccaggc gggcatacca caggcggccg
     5941 ccgggaccgc cgttctgggg atagcccttg atgcggccgt cggcgaagtt gacgccgaag
     6001 aaggcgcggt cgcggcccat cacgatgccg cggtagtcgg tggcgctgac gtattgggcg
     6061 tcgatgaagc ggccctggcg ggggtattcg aaggcgaaca cgctggtgtc gagatagggc
     6121 cgcgcgtccg acggcgcccc gccgccgaag ccgccgcgca tggtgccggt ggcgcccgag
     6181 aagtccatca gcgaatacaa ttccttgatg gtcggcaccc gccagtcgga atgcccgccg
     6241 gtacgggcgg ccgccgccag attgggggcg tcggtccaac tggtgcggct gaagtccttt
     6301 tgccacatca ggccggtgac caaatcggtc acggtgccgt cgccgttgtc gcggtagctg
     6361 ggccgggtgc cggcgacctg gccgtcctgg ccgtggaacg gggcgccggc cgacgggcag
     6421 gccgcccggc cgcgatcgtc gaagcaggtg ttctggctgg tatcgacgat gggatagctg
     6481 cggtcgccgg cccaggcggg caatgcagac agcaggaaaa tggcgctcag gaccccggtc
     6541 ttcatgatcc cctccccgaa aggcgttgga ggggatgcta cac
//
LOCUS       DATIKR010000629         4425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_143024, whole genome shotgun sequence.
ACCESSION   DATIKR010000629 DATIKR010000000
VERSION     DATIKR010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143024"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VLL76_09875"
     CDS             <1..380
                     /locus_tag="VLL76_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HSV29860.1"
                     /translation="GRNVHISGGAGIGGVLEPLQAGPVIIEDNVFIGARAEVAEGVIV
                     EEGAVLSMGVYIGKSTKIVDRATGEVYYGRVPAYSVVVSGTMPGKPLPNGEPGPNLYC
                     AVIVKRVDEKTRSKVSINELLRD"
     gene            480..1622
                     /gene="dapE"
                     /locus_tag="VLL76_09880"
     CDS             480..1622
                     /gene="dapE"
                     /locus_tag="VLL76_09880"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HSV29861.1"
                     /translation="MSDLKNPVPFAADLIRCPSVTPEDAGAIGTLARALESLGFTCHL
                     IASATGGPTIQNLYARLGDAGPNVCFAGHTDVVPPGQGWTVDPFGAQIIDGKLFGRGA
                     VDMKGAIASFVAAVARFLADGKPAGSISFLITGDEEGPAVDGTVKVLEWLAAKGETLN
                     CCIVGEPTNPRRLGEAMKIGRRGSMNTRLTVFGTQGHAAYPHLADNPIPRLMEILRRL
                     TEKPLDLGSAHFEASTLALTTVDVGNPATNVIPASARAGFNIRFNDLHTGAKVQQWIR
                     DIVASVGGETELAFEVSGESFLTQPGPLSEAVADAIKAVTGLDAELSTSGGTSDARFI
                     KNACPVIEFGLVNQTMHKSDEHVPVDHLEQLAEIYRAALDRLVGRA"
     gene            1619..2179
                     /locus_tag="VLL76_09885"
     CDS             1619..2179
                     /locus_tag="VLL76_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29862.1"
                     /translation="MSMVAEAASGIYGAWRLARRDPDGLKWFNATPQGFWRSFLAAVL
                     VLPAVLGLEVLDGSLAADNFTGRKLAVELIAYVIQWTAFPLVMGYVADGLDRGRNYIR
                     FVVAYNWSQVIQMAAFLPVSVAVMLVPNPAIALLSLIVMVMLLAYQAFVAHKALDVPV
                     MPAIGVVILDMLLGGLVARAAGSMAG"
     gene            complement(2176..2613)
                     /locus_tag="VLL76_09890"
     CDS             complement(2176..2613)
                     /locus_tag="VLL76_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HSV29863.1"
                     /translation="MALSGGFSADFPRFTREQLFAIATDVERYPAFIPWCKSARVLMD
                     DGGLREVDNHYGAGPADLAFRSRAVATPPDRLEITSTDGPFRRFSLTWTFTDLEQGCR
                     VRADYVVDFRSGLLQGLARLTIREVERRVLKRFRDRAAELYGR"
     gene            complement(2613..2954)
                     /locus_tag="VLL76_09895"
     CDS             complement(2613..2954)
                     /locus_tag="VLL76_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV29864.1"
                     /translation="MMQQGKVLERKVFYAGQKVFKEGDRGDRAYLIQDGTVEIVKNGM
                     TLASLSKGELFGEMALVDDQPRMASAIALTDVAVVVISRDVFREKLAKADPFIRGLLN
                     IFVRNIRNLTR"
     gene            3049..3555
                     /locus_tag="VLL76_09900"
     CDS             3049..3555
                     /locus_tag="VLL76_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29865.1"
                     /translation="MTAAAALRPDVRARLLARLRALMARTVANGATEQEELVAARMVA
                     KMIGQLDEAPAPPPRAEPPPNWAQAERDSQEYKQLLAKNTTEALLKAAVQELALNHIN
                     TVSPPRRRLDGEPVERVTTRELLEPYLAMMLAPGGTQLAGQIIRQTIDELVYDGALPP
                     WLDLPLTD"
     gene            3587..3931
                     /locus_tag="VLL76_09905"
     CDS             3587..3931
                     /locus_tag="VLL76_09905"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV29866.1"
                     /translation="MDLKKHIGLKVKAARQRKGITQEQLAEAVEKAVETISNIERGHA
                     LTGLDTLERVGTVLDQPLVYFFEDYGGPRATSRRRLAAERTIMATVQELSDDDAELAA
                     ALLDGMARHRQG"
     gene            complement(3943..>4425)
                     /locus_tag="VLL76_09910"
     CDS             complement(3943..>4425)
                     /locus_tag="VLL76_09910"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HSV29867.1"
                     /translation="EQADMTAICKELAQAGHSVRVVSPKKQAARSWDNTRWNGDMPVD
                     VAAVEAEARDFDALVLPGGLLSADTLRSDDFIIRLARDAAAQGKPVAALGHAPWVLVE
                     AGLVKGRAVTSHPAIRTDLANAGGQWRDEAFVADDGVITGRHSHDAVAFVSGLLQALR
                     "
BASE COUNT          717 a         1546 c         1456 g          706 t
ORIGIN      
        1 tcggccgcaa cgtccacata tcgggcggcg ccggcatcgg cggcgtgctc gagccgctgc
       61 aggccggccc ggtcatcatc gaggacaacg tcttcatcgg cgcccgcgcc gaagtggccg
      121 agggcgtgat cgtcgaggaa ggcgccgtgc tgtccatggg cgtctacatc ggcaagtcca
      181 ccaagatcgt cgaccgcgcc accggcgaag tctattacgg ccgcgtgccg gcctattcgg
      241 tggtggtctc gggcaccatg cccggcaagc ccctgcccaa cggcgagccc ggccccaacc
      301 tgtactgcgc cgtcatcgtc aagcgcgtgg acgagaagac ccgctccaag gtctcgatca
      361 acgagctgct gcgcgactga ccgtatcgtg gatgcccgga tcaagtccgg gcatgacggc
      421 ttttttcttc gtcatggccg ggcttgaccc ggccatccac gcaggcccag caggattgca
      481 tgtccgatct caagaacccc gtccccttcg ccgccgacct gatccgctgc cccagcgtca
      541 cgcccgagga tgctggcgcc atcggcaccc ttgcccgtgc cctggaaagc ctgggcttca
      601 cctgccacct gatcgcctcg gccaccggcg gccccaccat ccagaacctg tacgcccgcc
      661 tgggtgatgc cggccccaac gtctgcttcg ccggccatac cgacgtggtg ccgcccggcc
      721 agggctggac ggtcgatccg ttcggggcgc agatcatcga cggcaagctg ttcgggcgcg
      781 gcgcggtgga catgaagggc gccatcgcct cgttcgtcgc ggcggtggcg cgcttcctcg
      841 ccgacggcaa gccggccggc tcgatctcgt tcctgatcac cggcgacgag gaaggcccgg
      901 ccgtggacgg caccgtcaag gtgctggaat ggctggcggc caagggcgag acgctgaatt
      961 gctgcatcgt cggcgagccc accaatcccc gccgcctcgg cgaggccatg aagatcggcc
     1021 ggcgcggcag catgaacacc aggctgacgg tgttcgggac gcaaggccac gccgcctatc
     1081 cccatctggc cgacaacccc atcccgcgcc tgatggaaat cctgcgccgt ctgaccgaga
     1141 agccgctgga tttgggcagc gcccatttcg aggcctcgac cctggcgttg accacggtgg
     1201 acgtgggcaa cccggccacc aacgtgatcc cggccagcgc ccgggccggc ttcaacatcc
     1261 gcttcaacga cctgcacacc ggcgccaagg tgcagcaatg gatccgcgac atcgtcgcct
     1321 cggtgggcgg cgagaccgag cttgcgttcg aggtctcggg cgaaagcttc ctgacccagc
     1381 cggggccgct gtcggaggcc gtcgccgacg ccatcaaggc cgtgaccggc cttgatgccg
     1441 aattgtccac ctcgggcggc acctcggacg cgcgcttcat caagaacgcc tgtccggtga
     1501 tcgaattcgg cctggtcaac cagaccatgc acaaatccga cgagcacgtg ccggtcgatc
     1561 atctcgagca attggccgaa atctaccgcg ccgccctgga ccggctcgtg ggccgggcat
     1621 gagcatggtg gccgaagccg cctcgggcat ctacggcgcc tggcgcttgg cgcggcgcga
     1681 ccccgacggg ctgaaatggt tcaacgccac gccgcagggc ttctggcgct cgttcctggc
     1741 ggcggtgctg gtgctgccgg cggtgctggg actcgaggtg ctcgacggct cgctggccgc
     1801 cgacaatttc accggccgca agctggccgt cgaactgatc gcctacgtca tccagtggac
     1861 cgccttcccg ctggtcatgg gctatgtcgc cgacggcctg gatcgcggcc gcaactacat
     1921 ccgcttcgtg gtcgcctaca actggtcgca ggtcatccag atggccgcgt tcctaccggt
     1981 gtcggtggcg gtgatgctgg tgcccaaccc ggccatcgcg ctgttgagcc tgatcgtcat
     2041 ggtcatgctg ctggcctatc aggccttcgt cgcccacaag gcgctggacg tgccggtgat
     2101 gccggccatc ggcgtggtca tcctcgacat gctgctgggc ggcctggtcg cccgcgcggc
     2161 cggcagcatg gcgggctagc ggccatacag ctccgccgcc cggtcgcgga agcgcttcag
     2221 cacccggcgc tcgacctcgc ggatggtcag gcgggccagg ccctgcagca ggcccgagcg
     2281 gaaatccacc acgtaatcgg cgcgcacccg gcaaccctgc tccagatcgg tgaaggtcca
     2341 ggtcaggctg aagcggcgga acgggccgtc ggtcgaggtg atctccagcc ggtcgggcgg
     2401 cgttgcgacg gcgcggctgc ggaaagccag gtcggcgggg ccggcgccgt aatggttgtc
     2461 gacctcgcgc aggcctccgt cgtccatcag cacgcgggcg gatttgcacc agggaatgaa
     2521 ggcgggatag cgttcgacgt cggtggcgat ggcgaacagt tgttcgcgtg tgaaacgggg
     2581 aaagtcggcg gaaaagcccc cgctcaacgc catcagcggg tcaggttgcg gatgttgcgg
     2641 acgaagatgt tgagcaggcc gcggatgaac gggtcggcct tggccagctt ctcgcggaac
     2701 acgtcgcggc tgatcaccac caccgccacg tcggtcaggg cgatggcgct ggccatgcgc
     2761 ggctggtcgt ccaccagggc catctcgccg aacaattcgc ccttgctgag cgaggccagg
     2821 gtcatgccgt tcttgacgat ctcgacggtg ccgtcctgga tcagataggc acggtcgccc
     2881 cggtcgcctt ccttgaagac cttctggccg gcgtagaaaa ccttgcgttc gagaactttg
     2941 ccctgctgca tcatcggcgc gaaccccttc cctgccgtca actttatgca caacaggggc
     3001 gcgagtcatc ttttccgttg atgcgcgccg ctttacactc gccgcaccat gaccgccgcc
     3061 gccgcccttc gccccgatgt ccgcgcccga ttgctggcgc gcctgcgggc gttgatggcg
     3121 cgcacggtcg ccaacggcgc caccgagcag gaagagctgg tcgccgcccg catggtcgcc
     3181 aagatgatcg gccagctcga cgaagcgccc gccccgccgc cccgcgccga accacccccg
     3241 aactgggccc aggccgagcg cgattcccag gaatacaagc agctcctggc caagaacacc
     3301 accgaggcgc tgctgaaggc cgccgtgcag gaactggcgc tcaaccacat caacaccgtg
     3361 tcgccgccgc gccgccggct ggacggcgag ccggtcgagc gggtgaccac ccgcgaattg
     3421 ctggaaccct atctcgccat gatgctggcc cccggcggca cccaactggc cggccaaatc
     3481 atccgccaga ccatcgacga actggtctac gacggcgccc tgccgccgtg gctggacctg
     3541 ccgttgaccg attgaaggct tttcgccgct tggcctatgg gctgccatgg atttgaaaaa
     3601 acacatcggg cttaaggtga aggcggcgcg gcagcgcaag ggcatcaccc aggagcaact
     3661 cgccgaagcg gtcgaaaagg ccgtcgagac catttccaat atcgagcgcg gtcacgcact
     3721 gaccgggctg gatacgttgg agcgcgtcgg cacggtgctg gaccagccgc tggtgtattt
     3781 cttcgaggat tacgggggac cccgcgcgac gtcacggaga cgattggcgg cggaacgcac
     3841 catcatggcc acggttcagg aattgtcgga tgacgatgcg gaactggcag cggccctcct
     3901 tgatggcatg gcccgccatc ggcagggctg agtatacgat agtcaccgca gtgcctgcag
     3961 caacccgctg acgaaagcca ccgcgtcgtg gctgtgacgg ccggtaatca ccccgtcgtc
     4021 ggcgacgaag gcctcgtcgc gccattgccc gccggcattg gcgaggtcgg tgcggatggc
     4081 cgggtgcgag gtgacggcgc ggcccttgac caaccccgcc tcgaccagca cccacggcgc
     4141 atggcccagc gccgctaccg gcttgccctg ggcggcggcg tcgcgcgcca ggcggatgat
     4201 gaagtcgtcg gaccgcaagg tgtcggccga cagcaggccg ccgggcagga ccagggcgtc
     4261 gaaatccctg gcctcggcct ccaccgccgc cacgtccacc ggcatgtcgc cgttccagcg
     4321 ggtgttgtcc cacgaccgcg ccgcctgctt cttgggcgac accacccgca cgctgtggcc
     4381 ggcctgggcc aattccttgc agatggcggt catgtcggcc tgctc
//
LOCUS       DATIKR010000630         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_57495, whole genome shotgun sequence.
ACCESSION   DATIKR010000630 DATIKR010000000
VERSION     DATIKR010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57495"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..686
                     /locus_tag="VLL76_09915"
     CDS             <1..686
                     /locus_tag="VLL76_09915"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HSV29868.1"
                     /translation="GGLALELAHRADVEVVGVTLSREQLNAARRRAADAGLSARVRFE
                     LLDWRHVEGRYDRIVSVGMFEHVGATHYREFFEHVRDLLAPDGAALLHSIGRSNGPGD
                     TNPWMRKYIFPGGYSPALSEVLSAVEASGLFATDIEILRGHYARTIAEWQRRFQANRG
                     EIAKLYNERFCRMWEFYLTGAEMAFRHQGHMVFQLQLTRDPEAVPLTRDYMVEAERGM
                     AMEEQRAAE"
     gene            886..>1591
                     /locus_tag="VLL76_09920"
     CDS             886..>1591
                     /locus_tag="VLL76_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /protein_id="HSV29869.1"
                     /translation="MSSLSPNPGQSEGLTFRTPPHNFEAEQALLGAILLNNRSLEKVA
                     EFLRPEHFADPVHGRIFAACAKLIDKGQIANPVTLKTYFEQDGGLAEIGGTQYLAQLA
                     NSVVSIINAEDYGKLVHDLHLRRELIDLGETLVNEAHEPSIDRSAMDQIGGAEAKLYD
                     LATTGQTEGGFESFGTVLVEAIKLAEAAHKRAGKLSGVPTGLIDMDTRLGGLHPSDLL
                     ILAGRPSMGKTSLATNI"
BASE COUNT          272 a          565 c          497 g          257 t
ORIGIN      
        1 ggggcgggct ggcgctggaa ctggcgcacc gggccgacgt cgaggtggtg ggcgtgacgc
       61 tgtcgcgcga gcagttgaac gccgcccgcc gccgcgccgc cgatgccggg ctgtccgccc
      121 gcgtccgctt cgaactgctg gactggcgcc atgtcgaggg ccgctacgac cgcatcgtct
      181 cggtcggcat gttcgagcat gtcggcgcca cccattaccg cgagttcttc gagcacgtcc
      241 gcgacctgct ggcgcccgac ggcgcagcgc tgctgcattc catcggccgc tccaacggcc
      301 ccggcgacac caacccatgg atgcgcaaat acatcttccc cggcggctat tcccctgccc
      361 tgtccgaggt gctgtccgcc gtcgaggcct cgggcctgtt cgccaccgac atcgagatcc
      421 tgcgcggcca ttacgcccgc accatcgccg aatggcaacg ccgcttccag gccaaccgcg
      481 gcgagatcgc caagctctac aacgagcgct tctgccgcat gtgggaattc tacctgaccg
      541 gcgcggagat ggccttccgc caccagggcc acatggtgtt ccaactgcaa ttgacccgcg
      601 accccgaggc ggtgccgctg acacgcgact acatggtcga ggcggaacgg gggatggcga
      661 tggaggaaca gcgggcggcg gagtaatgct tttcacagcc gcccgtgcct gaaagactct
      721 tcggctgcgc ctcagagtga caaccctttg tgtgtcatgc tgagcgccag cgaagcatct
      781 ttcacccaag atggtttccg cccctcgggg gctgtccacg ggttccacag gctgtggata
      841 aattcgtcgc ttcccggacc cggccgatct gctagcatcc cggccatgtc gtccctgtcg
      901 cccaatcccg gccagtccga aggtctgacc ttccgcacgc cgcctcacaa tttcgaggcc
      961 gagcaggcgc tgctgggcgc aatcctgctc aacaaccgct cgctggaaaa ggtggccgag
     1021 ttcctgcggc ccgagcattt cgccgatccg gtccacgggc gcatcttcgc cgcctgcgcc
     1081 aagctgatcg acaagggcca gatcgccaac ccggtcacgc tgaagacgta tttcgagcag
     1141 gacggcggcc tggccgagat cggcggcacg caatacctgg cgcagctcgc caactcggtg
     1201 gtgtcgatca tcaacgccga ggattacggc aagctggtgc acgacctgca cctgcgccgc
     1261 gagctgatcg acctgggcga aaccctggtc aacgaggcgc acgagcccag catcgaccgc
     1321 tcggccatgg accagatcgg cggcgccgaa gccaagctgt acgaccttgc caccaccggc
     1381 cagaccgagg gcggcttcga atccttcggc accgtgctgg tcgaggccat caagctggcg
     1441 gaagcggccc acaagcgcgc cggcaagctg tcgggcgtgc ccaccggcct gatcgacatg
     1501 gacacccgcc tgggcggcct tcacccgtcg gatctgctga tcctggcggg acgcccgtca
     1561 atgggaaaga cttcgctggc caccaacatc g
//
LOCUS       DATIKR010000631         2631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_179342, whole genome shotgun sequence.
ACCESSION   DATIKR010000631 DATIKR010000000
VERSION     DATIKR010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179342"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..2354)
                     /locus_tag="VLL76_09925"
     CDS             complement(63..2354)
                     /locus_tag="VLL76_09925"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HSV29870.1"
                     /translation="MTNQKGLDHGASAQANLERETLLMHASGRPGKIEVVPTKPLTTQ
                     RDLSLAYSPGVAFPCLHIAKDPALAYDYTAKGNLVAVISNGTAVLGLGDLGALASKPV
                     MEGKAVLFKRFADVDAIDLEVDTRDVDEFINAVRFLGPSFGGINLEDIKAPECFIIES
                     RLREMMDIPVFHDDQHGTAIIAAAGLINAADLTGRRLADIKVVVNGAGAAGIACIELI
                     KAMGVRHDNVLLCDTKGVVYQGRKEGMNQWKSAHAVPTEARTLEQAMAGADMFLGLSV
                     KGAVTPEMVASMAPKPIIFAMANPDPEITPEEVRQVRDDAIVATGRSDYANQINNVLG
                     FPYIFRGALDVRARTINEAMKIAAAHAIAQLAREDVPDEVDAAYAGRRLRYGPEYIIP
                     VPFDPRLIAAIPPAVAKAAMESGVARRPIVDIDGYRKELSARLDPTAASLQAISEKVR
                     ANPRRVVFAEGEEEKSIRAALAFRNAGYGTPILLGREERIRDTMRAIGLPYGDGLEIV
                     NARISDKREHYTEVLYKRLQRKGALIRDVQRLVNQERNVWGSLMVAEGDADAMVTGLT
                     RNYWQAFDEIKRVVDPAPGELLFGLTILVARGRTVFLGDTTVHETPTPAQLADIAIQT
                     ARKARQMGHEPRVALLSYSTFGNPASDRAERVREAVAILDARQVDFEYDGEMAADVAL
                     DPELLAHYPFARLSGPANVLVMPGLYSANISWKLMQKLGGGTVIGPVLMGLSKPIQIT
                     SMDATVNDMVNMAVLACYDAARS"
     gene            complement(2367..>2631)
                     /locus_tag="VLL76_09930"
     CDS             complement(2367..>2631)
                     /locus_tag="VLL76_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29871.1"
                     /translation="GMIALFAGPVGASAAALVAAGVGGMAAKELLDEISAIPESDDFA
                     RALAAGSVILWVIVRDQLQEERAKAVLVEKGGANVHVFERNAA"
BASE COUNT          380 a          872 c          944 g          435 t
ORIGIN      
        1 gacatgatgc cggtggcggc ggcaaggcgg ccggtggaaa cggggcggcg cggcacgaga
       61 ccctagctcc gcgccgcgtc gtagcaggcc agcaccgcca tgttgaccat gtcgttgacg
      121 gtggcgtcca tgctggtgat ctggatgggc ttggacagcc ccatcagcac cggcccgatc
      181 accgtgccgc cgcccagctt ctgcatcagc ttccacgaga tgttggcgga atacagcccc
      241 ggcatcacca gcacgttggc cggccccgac aggcgggcga acgggtaatg cgccagcagc
      301 tcgggatcca gcgccacgtc ggcagccatc tcgccgtcat attcgaaatc gacctggcgg
      361 gcgtcgagaa tggccaccgc ctcgcgcacc cgctcggccc ggtccgaggc cgggttgccg
      421 aaggtggaat aggacagcag cgccaccctt ggctcgtggc ccatctggcg ggccttgcgg
      481 gcggtctgga tggcgatgtc ggccagttgc gcaggcgtcg gcgtctcgtg cacggtggtg
      541 tcgcccagga acaccgtgcg gccgcgcgcc accaggatgg tcaggccgaa cagcaattcg
      601 ccgggggcgg ggtccaccac ccgcttgatc tcgtcgaagg cctgccagta attgcgggtc
      661 aggccggtga ccatggcgtc ggcgtcgccc tcggccacca tcagcgagcc ccacacgttg
      721 cgttcctggt tgaccaggcg ctggacgtcg cggatcaggg cgcccttgcg ctgcaggcgc
      781 ttgtacagca cctcggtgta atgctcgcgc ttgtccgaga tgcgggcgtt gacgatctcc
      841 agaccgtcgc catagggcag gccgatggcg cgcatggtgt cgcggatgcg ctcctcgcgg
      901 cccagcagga tgggggtgcc gtagccggcg ttgcggaagg ccagcgcggc gcggatggac
      961 ttctcctcct cgccttcggc gaacaccacc cggcgcgggt tggcccgcac cttttccgag
     1021 atcgcctgca gcgacgccgc cgtggggtcg aggcgggccg acagctcctt gcggtagccg
     1081 tcgatgtcga cgatgggcct gcgcgccacc ccggattcca tggccgcctt ggcgacggcg
     1141 ggcgggatgg cggcgatcag gcgggggtcg aacggcaccg ggatgatgta ttccgggcca
     1201 tagcgcaggc ggcggccggc ataggcggca tcgacctcgt cgggcacgtc ctcgcgcgcc
     1261 aattgggcga tggcgtgggc ggcggcgatc ttcatggcct cgttgatggt gcgcgcccgc
     1321 acgtcgagcg cgccccggaa gatgtagggg aagcccagca cgttgttgat ctggttggcg
     1381 tagtccgacc gcccggtggc gacgatggcg tcgtcgcgga cctggcgcac ctcttccggc
     1441 gtgatctcgg ggtcggggtt ggccatggcg aagatgatcg gcttgggcgc catcgacgcc
     1501 accatctcgg gcgtcaccgc gcccttgacc gacaggccca ggaacatgtc ggcgccggcc
     1561 atggcctgtt ccagcgtgcg cgcctcggtc ggcaccgcgt gggccgactt ccactggttc
     1621 atgccttcct tgcggccctg gtagacgacg cccttggtgt cgcacagcag gacgttgtca
     1681 tggcgcacgc ccatggcctt gatcagctcg atgcaggcga tgccggcggc gccggcgccg
     1741 ttgaccacca ccttgatgtc ggccaggcgc cgcccggtca aatcggcggc attgataagg
     1801 ccggcggcgg cgatgatggc ggtgccgtgc tggtcgtcgt ggaagacggg gatgtccatc
     1861 atctcgcgca ggcggctctc gatgatgaag cactcgggcg ccttgatgtc ttcaaggttg
     1921 atgccgccga agctggggcc caggaagcgc acggcgttga tgaactcgtc gacgtcgcgg
     1981 gtgtcgacct cgaggtcgat ggcgtcgacg tcggcgaagc gcttgaacag caccgccttg
     2041 ccttccatca ccggcttgga cgccagcgcc cccagatcgc cgaggcccag caccgccgtg
     2101 ccgttggaga tgaccgccac cagattgccc ttggcggtgt agtcgtaggc cagcgccggg
     2161 tccttggcga tgtgcaggca gggaaaggcg acgcccgggg aataggccag cgacaggtcg
     2221 cgctgggtgg tcagcggctt ggtcggcacc acctcgatct tgccggggcg gcccgaggcg
     2281 tgcatcagca gcgtctcgcg ctcgaggttg gcctgcgcgc ttgccccgtg gtcgaggccc
     2341 ttctggttgg tcatcgcatg gaatccttag gccgcgttcc tctcgaacac atggacattg
     2401 gcgccgccct tctccaccag gacggccttg gcgcgctcct cctgcaactg gtcgcgcacg
     2461 atcacccaca ggatgacgct gccggcggcc aaggcgcggg cgaaatcgtc ggattccggg
     2521 atggcgctga tctcgtcgag cagttccttg gcggccatgc cgccgacgcc ggcggcgacc
     2581 agggcggcgg ccgaggcgcc gaccgggccg gcgaacaggg cgatcatgcc g
//
LOCUS       DATIKR010000632         3822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_21403, whole genome shotgun sequence.
ACCESSION   DATIKR010000632 DATIKR010000000
VERSION     DATIKR010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21403"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VLL76_09935"
     CDS             complement(<1..557)
                     /locus_tag="VLL76_09935"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HSV29872.1"
                     /translation="MLETLRQATKTWIVKLLLGIVALSFVAFGGDFISGGLFGRGPAI
                     EVGGTEIPAAEVNNEFKRAVDRLQPMFGGKLTADDARKMGILDRTIDQIVTRSLIDEA
                     GRRLGLIASEEAVVAQIAADPTFKNELGQFDRDRLRAALGRIGMSEAELVRMERQNLV
                     RGQIGDALSGGVAAPAALVDQLVRQ"
     gene            830..1231
                     /locus_tag="VLL76_09940"
     CDS             830..1231
                     /locus_tag="VLL76_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29873.1"
                     /translation="MASKPLFIMLCSGEHEKIQLAAMTASVAAVSDTPVEVFVTMDAI
                     LAFQKGLTPEQRYRGGHFHELFMTHKVPDAIELFEQGKMLGEMKMWACAMVLDLKHWD
                     TEKDLVEGLFDGPAGLAKFLADAEQGELITI"
     gene            1263..1493
                     /locus_tag="VLL76_09945"
     CDS             1263..1493
                     /locus_tag="VLL76_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HSV29874.1"
                     /translation="MAERQTIDARGAFCPGPLMELIAALKLASIGDEVEVLSSDKGSA
                     SDIPAWVAKVGHEYVNTTEHDGYWSVVVRKAK"
     gene            1556..2695
                     /locus_tag="VLL76_09950"
     CDS             1556..2695
                     /locus_tag="VLL76_09950"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HSV29875.1"
                     /translation="MSKAILIVGGGLSGTIVANGLCRQLGNELRKGEVTITMIGNTDQ
                     HLYQPGLLYVPFGRIREAELFRDQRRVLDRRVNLFIDPAKHVDVDAQVVSTEAGRSFK
                     YDYLVLATGSRCMPQNIPGMKEGAHWFYELDAARKLRDALNDFKGGKIVVNVNAPHKC
                     PVAPLELTLMLHEFLQNKGLRDKSEIVYTYPIGRLHSLEPVAHWAGPVFDQMGIKSET
                     FFNTESVDPEKKTITSMEGVELGYDLLITVPPHEGAQVITDSNLGKGGWVPTNTKTLH
                     REGSTNVFVVGDTTNIPISKAGSTAHFEADVLIDNLVSLCTEGRWAREYDGKAFCFIE
                     TGFHSGTYVWFNYTTPPSVAPPSQMLHWFKLAYNRLYWLSARGLL"
     gene            2705..3256
                     /locus_tag="VLL76_09955"
     CDS             2705..3256
                     /locus_tag="VLL76_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29876.1"
                     /translation="MTDLTPPTAPPPVLDELAQLAQGARNALCDSMVERLTSTAGNVM
                     EVADKLNDPDVRDGLVTLLDGIAEMQRNGALDTLLQVVQVVHAMRRASTDSMVERAFA
                     FMEHMASNLATEDLATLAHEAKAAMEDAIDHCNIPGGGGGMLGTLKMISNPETQEALR
                     FMLAFSCSLRKRAVVIAKSPPVL"
     gene            3400..>3822
                     /locus_tag="VLL76_09960"
     CDS             3400..>3822
                     /locus_tag="VLL76_09960"
                     /EC_number="5.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HSV29877.1"
                     /translation="MTRRPLIAGNWKMNMLKADGVALASGVAAKRKAEANVACDVLVC
                     PPFTLISEVAKAVEGSGIAVGGQDCHAKTSGAHTGDTSPAMLKDLGCAYVILGHSERR
                     TDHKETDAEVKAKAAAAHAAGLKAIICVGETLAQRDAGE"
BASE COUNT          701 a         1284 c         1235 g          602 t
ORIGIN      
        1 tgctggcgga ccaactggtc gaccagcgcc gccggggcgg ccacgccgcc cgacagggcg
       61 tcgccgatct ggccgcgtac caggttctgg cgttccatgc gcaccagttc ggcctcggac
      121 atgccgatgc ggccgagcgc cgcgcgcagg cggtcgcggt cgaactggcc cagttcgttc
      181 ttgaaggtcg gatcggcggc gatctgcgcc accaccgctt cctcggacgc gatcaggccc
      241 aggcggcggc cggcctcgtc gatcagcgag cgggtgacga tctggtcgat ggtgcggtcc
      301 aggatgccca tcttgcgggc gtcgtcggcg gtcagcttgc cgccgaacat gggctgcagg
      361 cgatcgacgg cacgcttgaa ctcgttgttg acctcggcgg cggggatctc ggtgccgccc
      421 acctcgatgg ccgggccgcg gccgaacagg ccgccgctga tgaagtcgcc gccgaaggcg
      481 acgaagctca acgccacgat tcccagcagg agcttgacga tccaggtctt ggtggcttgg
      541 cggagggtct cgagcatgtc gctttccgag gggagatggg aaacgcccgg ccgggcgccc
      601 ggcataataa gagggggggc aaggccccgc aacccagaat cggccggcct tgggggtgtc
      661 gaaggccctg gccggcaacc ttctttcgga gaaggtttca taccttcggg cgggaggttc
      721 agaaatcttc ttgcgccaaa accctacggc cggtgtatat aatcattttc gaaggtaagc
      781 gccttctaac aaacgaaatt gagaatactt cgcaagagga aacgccccca tggcctccaa
      841 gcccctgttc atcatgcttt gctccggcga gcacgagaag attcagcttg ccgctatgac
      901 cgcctcggtc gccgccgtct ccgacacccc ggtcgaggtg ttcgtgacca tggacgccat
      961 cctggcgttc cagaagggcc tgacccccga gcagcgctac cgtggcggcc atttccacga
     1021 gctgttcatg acccacaagg tgccggacgc catcgagctg ttcgagcagg gcaagatgct
     1081 gggcgagatg aagatgtggg cttgcgccat ggtgctcgat ctcaaacact gggataccga
     1141 aaaggacctg gtcgagggcc tgttcgacgg ccccgccggc ctcgccaagt tcctcgccga
     1201 cgccgagcag ggcgaactca tcaccatctg acccttggtt agcacgtaga aggaagaaca
     1261 ccatggccga acgccagacc atcgacgccc gcggcgcctt ttgccccggt cccctgatgg
     1321 aactcatcgc cgccctcaag ctcgcctcga tcggcgacga agtcgaagtg ctgtcctccg
     1381 acaagggctc ggccagtgac atccccgcct gggtcgccaa ggtcgggcat gagtacgtca
     1441 acaccaccga gcacgacggt tactggagcg tggtggtccg caaggcgaag taaaggtaga
     1501 gttgccgcaa acggccgcga cagacggccg tggctaacca agggaggctt cattcatgtc
     1561 caaggcgatt ctgatcgtcg gtggcggcct gtcgggcacc atcgtcgcga acggcctgtg
     1621 ccgccagctc gggaacgagc tgcgcaaggg cgaggtcacc atcaccatga tcggcaacac
     1681 cgatcagcac ctgtaccagc ccggcctgct gtacgtgccg ttcggccgca tccgcgaggc
     1741 cgagctgttc cgcgaccagc gccgcgtgct cgatcgccgc gtcaacctgt tcatcgaccc
     1801 ggccaagcac gtggacgtgg acgcccaggt ggtctcgacc gaggccggcc gcagcttcaa
     1861 gtacgactac ctggtgctgg ccaccggctc gcgctgcatg ccgcagaaca tccccggcat
     1921 gaaggaaggc gcccactggt tctatgagtt ggacgccgcc cgcaagctgc gcgacgcgct
     1981 caacgacttc aagggcggca agatcgtcgt caacgtcaac gccccgcaca aatgcccggt
     2041 ggcgccgctc gagctgaccc tgatgctgca cgaattcctg cagaacaagg gcctgcgcga
     2101 caagtccgag atcgtctaca cctatcccat cggccgcctg cactcgctgg agccggtggc
     2161 gcactgggcc ggcccggtgt tcgaccagat gggcatcaag tccgagacgt tcttcaacac
     2221 cgagtcggtg gacccggaga agaagaccat cacctcgatg gaaggcgtcg agctgggcta
     2281 cgacctgctg atcaccgtgc cgccgcacga gggcgcgcag gtcatcaccg actcgaacct
     2341 gggcaagggc ggctgggtgc cgaccaacac caagacgctg caccgcgagg gttcgaccaa
     2401 cgtgttcgtg gtcggcgaca ccaccaacat cccgatctcg aaggccggct cgaccgccca
     2461 tttcgaggcc gacgtgctga tcgacaacct ggtgtcgctg tgcaccgagg gccgctgggc
     2521 gcgcgaatac gacggcaagg ccttctgctt catcgagacc ggcttccact ccggcaccta
     2581 cgtgtggttc aactacacca cgccgccgtc ggtggctccg ccgtcgcaga tgctgcactg
     2641 gttcaagctc gcctataacc gcttgtactg gctgtccgcc cgcggcctgc tgtaggaggc
     2701 gtcaatgacc gatctcactc cgccgaccgc accgccgccg gtgctggacg aactggccca
     2761 actggcccag ggcgcccgca acgcgctgtg cgacagcatg gtcgagcgtc tgacctcgac
     2821 cgccggcaac gtcatggaag tggccgacaa gctgaacgac cccgacgtgc gcgacggcct
     2881 ggttacgctg ctcgacggca tcgccgagat gcagcgcaac ggggcgctcg acaccctgct
     2941 gcaggtggtc caggtggtgc acgccatgcg ccgcgccagc accgacagca tggtggagcg
     3001 cgccttcgcg ttcatggagc acatggccag caacctggcg accgaggatc tggcgaccct
     3061 ggcccacgag gccaaggccg ccatggagga cgccatcgac cactgcaaca tcccgggcgg
     3121 tggcggcggc atgctgggca cgctgaagat gatctcgaac cccgagaccc aagaggccct
     3181 gcgcttcatg ctggcgttct cgtgttccct gcgcaaacgc gccgtggtca tcgccaagtc
     3241 gccgccggtg ctgtaagctg gcgtcgccct ggcacgaggg acgaaaaggg gcggggacgc
     3301 ggtggcgtgc ccgccttttt ttcttgagga ttttgacaag acggacgggg ggagccaatg
     3361 gtatacgccc cgccggaaac cacgagggag gagaacgaaa tgaccagacg gcccctgatc
     3421 gccggtaact ggaagatgaa catgctgaag gccgatggcg tcgccctggc ctcgggcgtc
     3481 gccgccaagc gcaaggccga ggcgaatgtc gcctgcgacg tgctggtgtg cccgcccttt
     3541 accctgattt ccgaggtcgc caaggcggtc gaggggtcgg gcatcgcggt cggcggccag
     3601 gattgccatg ccaagacctc gggcgcccat accggcgaca cctcgccggc catgctcaag
     3661 gacctgggct gcgcctacgt catcctgggc cattccgagc gccgcaccga ccacaaggag
     3721 accgacgccg aggtcaaggc caaggccgcc gccgcccatg ccgccggcct caaggccatc
     3781 atctgcgtcg gcgagaccct ggcccagcgc gacgccggcg ag
//
LOCUS       DATIKR010000633         5851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_57535, whole genome shotgun sequence.
ACCESSION   DATIKR010000633 DATIKR010000000
VERSION     DATIKR010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5851
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57535"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VLL76_09965"
     CDS             <1..539
                     /locus_tag="VLL76_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="homocitrate synthase"
                     /protein_id="HSV29878.1"
                     /translation="AHDDLGLATANSLAAIRGGATHVSTTVNGLGERAGNAPLEEVVM
                     ALDHLHGIDTGIAKARLAEVSRLVAAASGRPVPVNKSIVGDAVFTHESGIHVSGLLRD
                     RANYQAIDPGELGRDHVLVLGKHSGVSAVMHACGELGLKPTEKQARAVLARVRAHAVA
                     TKRPPLPDELRGFVQDLN"
     gene            551..859
                     /locus_tag="VLL76_09970"
     CDS             551..859
                     /locus_tag="VLL76_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogenase-stabilizing/protective protein NifW"
                     /protein_id="HSV29879.1"
                     /translation="MCNPLDRLARLSSAEQFFMTLGIDFDPHVLNVHRLHILKRFNEL
                     LDIKSLDGLDNDAIEARCTQSLAQAYAEFAGGTGAKTFKVFQQQQTGFVPLTAILPNQ
                     "
     gene            910..1188
                     /locus_tag="VLL76_09975"
     CDS             910..1188
                     /locus_tag="VLL76_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29880.1"
                     /translation="MADKGDKIPVIDPAAAPLDTDAEVAGTPTPRAAVKSSLAACLKS
                     LRNRPRPDTFGGMRQADMAHQQRLGRMLFVWVAVLVVLGIAAGWWGLA"
     gene            complement(1221..2237)
                     /locus_tag="VLL76_09980"
     CDS             complement(1221..2237)
                     /locus_tag="VLL76_09980"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HSV29881.1"
                     /translation="MPYKRITLTHYLLQEQRRLGRSGTFTALMSDIITACKMVSHEVN
                     RGALVGNHGVAGSENIQGEEQKKLDVLANDIFLHMNALGGNYASMASEELEDVHAVTG
                     SADGRYLLLFDPLDGSSNIDVNISVGSIFSILRFPEGSDPNSAQPFLQPGVEQVAAGY
                     ALYGSSTMLVLTTGNGVNGFTLDRDVGMFFLTHPNMTVTPDTKEFAINASRSRFWEPP
                     VKRYVDECLAGKEGPREKDFNMRWVASMVAEVHRILVRGGVFMYPMDTANAKTGGKLR
                     LMYEANPMAMIIEQAGGAATTGRQRIMEVKPNGLHQRVPVILGSKNEVERIAAYHAEY
                     DAKK"
     gene            2396..2839
                     /gene="hybE"
                     /locus_tag="VLL76_09985"
     CDS             2396..2839
                     /gene="hybE"
                     /locus_tag="VLL76_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[NiFe]-hydrogenase assembly chaperone HybE"
                     /protein_id="HSV29882.1"
                     /translation="MTTLAADDLARVDRLVEQFTRIGDERMRDLGLYNPALRVEAIGF
                     RRWEGWLAGVLVTPWFMNFMLLPTAAEQLAGFAVGTKRRIEMPKGEVVFTIGEVEEIG
                     PYAANSLHSPMGEFGDHLNAAARAWALVETFFQEPKDEATTPCGR"
     gene            2904..3419
                     /locus_tag="VLL76_09990"
     CDS             2904..3419
                     /locus_tag="VLL76_09990"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HSV29883.1"
                     /translation="MADTKEILVDWLRDAHAMERASIDNLQRQVSHLEHYPDIRAKFQ
                     EQLELTKRQEERIDQQLQAMGADASAIKDAITRFAGQAQAMMGSLAPDEVVKQAVTTL
                     AYEEWEIANFRALATAAEHEGESTMATMFEEMADEKADMADWLSEAIPDITRRYLDMR
                     AGGAPAGMAKS"
     gene            3476..4066
                     /gene="mobA"
                     /locus_tag="VLL76_09995"
     CDS             3476..4066
                     /gene="mobA"
                     /locus_tag="VLL76_09995"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HSV29884.1"
                     /translation="MEKPPIAGLILAGGLSRRMGGGDKALSDFNGAPLIAAIIDRLAP
                     QVGPLVLNANGDPARFAFTGLPVVADVVPHHIGPLAGLLTGFDWIARNAPECRWLATV
                     PSDSPLFPADLVERLAAARADVAVARSGRHAHPVFSLWNVDLAERLRAMVAAGERRMG
                     AALDRFDAAEVEWPDHPTDPFFNVNTPEDLAALRSL"
     gene            complement(4063..4506)
                     /locus_tag="VLL76_10000"
     CDS             complement(4063..4506)
                     /locus_tag="VLL76_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HSV29885.1"
                     /translation="MRGNVSSYLAGLLFGAGIMLSGMADPANVLGFFDVFGAWNPTLG
                     FVMAGGLMVSFVGYRYCMSRPGPVCAAVYQIPSRQDVDRRLVAGAALFGIGWGMAGYC
                     PGPAMIAAGGGFTEAASFTAAMAVGMLAWRMVEQSLDRSRAAQAA"
     gene            complement(4511..4936)
                     /locus_tag="VLL76_10005"
     CDS             complement(4511..4936)
                     /locus_tag="VLL76_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HSV29886.1"
                     /translation="MTDFSPVSAVAGGVLIGLGAVVLLLANGRIAGIAGILGSVLSDP
                     AARDSRWRLAFLAGMVTPAVALGAVGRFEIQGAGLSLPLLLAAGFLVGFGTRMGNGCT
                     SGHGICGLARLSKRSAAAVATFMAAATVTVFVMRHVVGG"
     gene            5090..>5851
                     /locus_tag="VLL76_10010"
     CDS             5090..>5851
                     /locus_tag="VLL76_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV29887.1"
                     /translation="MSKAIPKVGIVSLGCAKALVDSERILTKLRAEGYDISATYDGAD
                     VVIVNTCGFLDSARAESLEAIGEAMAENGKVIVTGCMGNEEKAIREIHPGVLSVTGPH
                     QYEAVVEAVHHVVPPVHDPFTDLVPPEGLRLTPRHYAYLKISEGCNHSCSFCIIPNIR
                     GDLVSRPAGDVLEEAERLAMAGVKELLVISQDTGAYGLDLKHAESNWHGRPVKSRLTE
                     LADALGDLGIWVRLHYVYPYPHVDEVIGLMAEGRLL"
BASE COUNT          995 a         2032 c         1938 g          886 t
ORIGIN      
        1 acgcccatga cgatctgggc ctcgccaccg ccaattccct ggccgccatc cgcggtggcg
       61 ccacccacgt ctcaaccacg gtcaacggcc tgggcgagcg cgccggcaac gcgccgctgg
      121 aagaggtggt gatggcgctc gaccacctgc acggcatcga caccggcatc gccaaggccc
      181 gcctggccga ggtgtcgcgg ctggtcgccg ccgcctcggg gcgaccggtg ccggtcaaca
      241 agagcatcgt cggcgacgcg gtgttcaccc acgaatccgg catccatgtg tccggcctgt
      301 tgcgcgaccg cgccaattac caggccatcg accccggcga gctggggcgc gaccacgtcc
      361 tggtgctggg caagcattcc ggcgtttcgg cggtgatgca cgcctgcggc gagcttggcc
      421 tgaagccgac cgaaaagcag gcccgcgccg tgctggcccg tgtccgcgcc cacgccgtcg
      481 ccaccaagcg cccccccctg cccgacgaac tgcgcggctt cgtgcaggat ctgaactgac
      541 ggagaccatc atgtgcaatc ccctcgaccg cctcgcccgc ctgtcctcgg ccgaacaatt
      601 cttcatgacg ctggggatcg acttcgaccc gcatgtgctg aacgtccacc gcctgcacat
      661 cctgaagcgg ttcaacgagc tgctggacat caagtcgctg gacggcctcg acaacgacgc
      721 catcgaggcg cgctgcaccc agtcgctggc gcaggcctat gccgaattcg ccggcggcac
      781 cggcgccaag accttcaagg tgttccagca gcagcagacg ggattcgtgc cgctgaccgc
      841 catcctgccc aaccagtgac ggaacccggg cgcgcccttc gccgtttcct ccggtgaagg
      901 gagggcgcca tggcagacaa gggtgacaag atcccggtga tcgacccggc cgccgcaccg
      961 ctggataccg acgccgaagt cgccggcacg ccgaccccgc gtgcggccgt caagtcgtcg
     1021 ctggccgcct gcctcaaaag tctgaggaac cgcccccgcc cggacacctt cggcggcatg
     1081 cgccaggccg acatggcgca tcagcagcgg ttgggccgca tgctgtttgt ttgggtcgcg
     1141 gttctggtgg tgttggggat cgccgccggc tggtgggggc tggcgtagaa aggccgggca
     1201 ccaggcccgg ccatcctcac ttacttcttg gcgtcgtatt cggcgtggta ggccgcgatg
     1261 cgctcgactt cgttcttcga gcccaggatc accggcacgc gctggtgcaa gccgttgggc
     1321 ttgacttcca tgatgcgctg gcggccggtg gtggcggcgc cgccggcctg ctcgatgatc
     1381 atggccatcg ggttggcctc gtacatcagg cgcagcttgc cgccggtctt ggcgttggcg
     1441 gtgtccatcg gatacatgaa cacgccgccg cgcaccagga tgcgatgcac ctcggccacc
     1501 atcgaggcga cccagcgcat gttgaaatcc ttttcgcgcg ggccttcctt gccggccagg
     1561 cattcgtcga cataacgctt caccggcggc tcccagaacc gcgagcgcga ggcgttgatg
     1621 gcgaattcct tggtgtccgg cgtcaccgtc atgttcgggt gggtcaggaa gaacatgccc
     1681 acgtcacggt ccagggtgaa gccgttgacg ccgttgccgg tggtcagcac cagcatggtg
     1741 gacgaaccat agagcgcgta gccggcggcc acctgctcga cgccgggctg caggaagggc
     1801 tgggccgagt tggggtcgga gccctcgggg aagcgcagga tcgagaagat cgagccgacc
     1861 gagatgttga cgtcgatgtt ggacgagccg tccagcgggt cgaacagcag caggtagcgg
     1921 ccgtcggccg aaccggtcac ggcgtggacg tcctcgagct cctcggacgc catcgaggcg
     1981 tagttgccgc cgagcgcgtt catgtgcagg aagatgtcgt tggccagcac gtcgagcttc
     2041 ttctgctctt cgccctggat gttctcgctg ccggcgacgc cgtggttgcc gaccagagca
     2101 ccgcggttga cctcgtgcga gaccatcttg cacgcggtga tgatgtcgct catcagcgcg
     2161 gtgaaggtgc cggaacggcc gagacgacgc tgctcctgca gcagatagtg ggttagcgtg
     2221 atccgcttat agggcatttt cccccgctct cctgttcttg gtgcgcgccc gcgcgaacac
     2281 agtggtagcc cactcccacc cccgatgcaa tggccggata cctcgatttc gtgggcctcg
     2341 cgccaacggg tggcggtgcg ctacactccg cctcccaccc cttttcggag ccgtcatgac
     2401 caccctcgcc gccgacgatc tcgcccgtgt cgaccgcctg gtcgagcaat tcacccgcat
     2461 cggcgacgag cgcatgcgcg acctcggcct ctacaacccc gccctgcggg tcgaggccat
     2521 cgggttccgc cgctgggagg gctggctggc cggcgtgctg gtgacgccgt ggttcatgaa
     2581 cttcatgctg ctgcccaccg ccgccgagca actggccggc ttcgccgtgg gcaccaagcg
     2641 ccgcatcgag atgcccaagg gcgaggtcgt gttcaccatc ggcgaggtcg aggagatcgg
     2701 cccgtatgcc gccaactcgc tgcattcgcc catgggcgag ttcggcgacc acctcaacgc
     2761 cgccgcccgc gcctgggcgc tggtcgagac cttcttccag gaaccgaagg acgaagcgac
     2821 cacgccctgc gggcggtagc tccagggaac gcgggcttgg cgccgcttgt tgccttgggg
     2881 caaggcttca tgaggagggc gagatggccg acaccaagga gatcctggtc gactggcttc
     2941 gcgatgcgca cgccatggaa cgggcgtcca tcgacaacct tcagcgccag gtcagccacc
     3001 tggagcacta tcccgacatc cgcgccaagt tccaggaaca gttggaactc accaagcgcc
     3061 aggaagagcg catcgaccag caattgcagg ccatgggcgc cgacgcctcg gccatcaagg
     3121 acgccatcac ccgcttcgcc ggccaggccc aggcgatgat gggcagcctg gcgcccgacg
     3181 aggtggtcaa gcaggcggtc accaccctgg cctacgagga atgggagatc gccaacttcc
     3241 gcgccctggc gacggccgcc gaacacgagg gcgaatcgac catggcgacc atgttcgagg
     3301 agatggccga cgaaaaagcc gacatggccg actggctgtc cgaggcgatt cccgacatca
     3361 cccggcgcta cctggacatg cgggccggcg gggccccggc cgggatggcg aagagctgac
     3421 cgaagggccg ggccgcatat tgccaatggc ccggcccttc cctatcctgc cgggcatgga
     3481 aaaaccaccc atcgcgggcc tgatcctcgc cggtggcctg tcgcgccgca tgggcggcgg
     3541 cgacaaggcg ttgagcgatt tcaacggcgc gcccctgatc gccgccatca tcgaccgcct
     3601 ggccccccag gtcgggccgc tggtgctgaa cgccaacggc gaccccgccc gcttcgcctt
     3661 cacgggcctg ccggtcgtgg ccgacgtggt gccgcatcac atcggcccgc tggccggatt
     3721 gctgaccggt ttcgactgga tcgcgcgcaa tgcgcccgaa tgccgctggc tggcgacggt
     3781 gcccagcgat tcgccactgt tccccgccga cctggtggaa aggctggcgg cggccagggc
     3841 cgacgtggcg gtggcgcgct cgggccgcca tgcccacccg gtgttctcgc tgtggaatgt
     3901 ggatcttgcg gagcgcctgc gcgccatggt ggcggcgggc gagcggcgca tgggcgccgc
     3961 attggaccgt ttcgacgcgg ccgaggtgga atggcccgac catcccaccg acccgttctt
     4021 caacgtcaac acccccgagg atctggcggc cttgcgctcg ctttaggccg cctgggcggc
     4081 gcgggagcgg tccaggctct gttccaccat ccgccacgcc agcatgccga ccgccatggc
     4141 ggcggtgaac gaggccgcct cggtgaagcc gccgccggcg gcgatcatgg ccgggccagg
     4201 gcaatagccg gccattcccc agccgatgcc gaacagagcg gcgcccgcga ccagacggcg
     4261 gtcgacgtcc tggcgggacg ggatctggta gacggcggcg cagaccgggc cgggccggct
     4321 catgcaatag cgatagccga cgaacgacac catcaggccg ccggccatca cgaagcccaa
     4381 agtgggattc cacgccccga acacgtcgaa gaagcccagc acgttggcgg gatcggccat
     4441 gcccgacagc atgatgccgg cgccgaacag caggccggcg agataggacg aaacattgcc
     4501 gcgcatggcc tcagccccca accacgtgac gcatgacgaa gacggtgacc gtcgccgccg
     4561 ccatgaaggt ggcgaccgcc gcggccgagc gtttggacag ccgcgccagg ccgcagatgc
     4621 cgtggcccga ggtgcagccg ttgcccatgc gcgtgccgaa gccgaccagg aagccggcgg
     4681 cgagcaacag cggcagcgac agcccggcgc cctggatctc gaaccggccc acggccccca
     4741 gcgccaccgc cggggtgacc atgccggcga ggaaggccag ccgccagcgc gaatcccggg
     4801 cggcgggatc cgacagcacc gaccccaaaa tgccggcaat gccggcgatg cggccattgg
     4861 ccaacagcag cacgaccgcc cccaggccga tcagcacgcc gccggcgaca gcggaaacag
     4921 gcgaaaagtc ggtcattccc ctccaaccgt cccattgtat tcaatcgcgc taaactagcg
     4981 gcaaggcgcc cacggtcaag agccgtcttc gcggttgcag catgggcggc ggagatcgca
     5041 tcctcgcggc gcttgaaaca gacgggaaat gcgcgtactt cacgccccca tgagcaaagc
     5101 aatcccgaaa gtcggcatcg tcagcctggg ctgcgccaag gcgctggtgg attccgaacg
     5161 catcctcacc aagctgcggg ccgagggcta cgacatctcg gcgacctatg acggcgccga
     5221 cgtggtcatc gtcaacacct gcggcttcct cgacagtgcg cgcgccgaat cgctggaggc
     5281 gatcggcgag gccatggccg agaacggcaa ggtcatcgtc accggttgca tgggcaacga
     5341 ggaaaaggcg atccgcgaga tccaccccgg cgtgctgtcg gtcaccgggc cgcaccagta
     5401 cgaggcggtg gtcgaggcgg tgcaccatgt ggtgccgccg gtgcatgatc cctttaccga
     5461 cctggtgccg cccgagggcc tgcgcctgac cccgcgccac tatgcttatc taaagatttc
     5521 agaaggttgc aaccattcct gcagcttctg catcatcccc aacatccgtg gcgacctggt
     5581 cagccgaccg gccggcgacg tgctggagga agccgagcgc ctagccatgg cgggcgtcaa
     5641 ggaattgctg gtgatctcgc aggacaccgg cgcctacggc cttgacctca agcatgcgga
     5701 aagcaattgg cacggccgcc cggtcaaatc ccggttgacg gaactggccg acgccctggg
     5761 cgatttgggc atctgggtgc gcctgcacta cgtctacccc tacccgcacg tcgacgaggt
     5821 gatcgggctg atggccgagg gccggctgct g
//
LOCUS       DATIKR010000634         4241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_239368, whole genome shotgun sequence.
ACCESSION   DATIKR010000634 DATIKR010000000
VERSION     DATIKR010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4241
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239368"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VLL76_10015"
     CDS             <1..213
                     /locus_tag="VLL76_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase WbuB"
                     /protein_id="HSV29888.1"
                     /translation="GLWVEAAQPGALAEAARKLCHDPALRDDLAARSLAAAPLHSREH
                     QAERFIRVLELVKAGQGPTQAGTVES"
     gene            256..2169
                     /locus_tag="VLL76_10020"
     CDS             256..2169
                     /locus_tag="VLL76_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar
                     epimerase/dehydratase"
                     /protein_id="HSV29889.1"
                     /translation="MKVKPSLNRAHVAFAHDLVMAAVSFLAAINLRMGDAGIPGWDGA
                     TLAVATATFTAIAAAAFLSARMYKGVWRYASVNDLVTLTRGATITIVAFYLLMFLVTR
                     LQDLPRTVLIINWFVLLALLGGPRFLYRSFKDRRLAAKIAADDKRIPVLLVGAGDEAE
                     LFIRATRAPDAEYGAVGLVSERGARVGRNIHGIDVLGSIDELEAVVADLKAKGRAPQR
                     LIITDHRLDGGVVRFLFETADRLGLALARIPRLTDLKDGVEDKVVIRPIAVEDLLGRP
                     QAVLDRAGMEALIKGRRVLVTGAGGSIGSELVRQISDYGPDRLVLFENCEYNLYAIDL
                     ELAGRCPDLDRRPVLGDIRDAARVRAAMAEHRPDLVFHAAALKHVPMVEWNPDEGVLT
                     NAVGTRIVADACVEAGVQVMVQISTDKAVNPTNVMGASKRVAEMYTQALDLAGISGGT
                     RFVTVRFGNVLGSTGSVVPLFQKQLAQGGPLTVTHPDMTRYFMTVREAVELVLQASAF
                     GVESPTYRGKIFVLDMGEPVKIVDLARQMIRLAGLRPEIDVAIAFTGLRPGEKLFEEI
                     FHGAEPPLPTERKGILFAAPRSVDAEELGRALSELEAGCRAHSAETVLAIVRRLVPEY
                     APPAEARVPELTP"
     gene            2166..4217
                     /locus_tag="VLL76_10025"
     CDS             2166..4217
                     /locus_tag="VLL76_10025"
                     /inference="COORDINATES: protein motif:HMM:NF028199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HSV29890.1"
                     /translation="MSLSHLIRHALSMPPHVVAAKGARMAGRILRDRLVAALMKNQTT
                     YPPPSQAAGGLARRFRPLDPAVLAPIADDLRRWAAEARAHRFDLLGSGPVRVVRGERF
                     GRYGMAARTATDWRAAIAAELWRGNRATAHSILLLIDDDNYQPIDWQADFRSGWRWSV
                     RTWGTGIAYAHKDGIDVKVPWELARLQHLPRLALAHALDGDRALAREFRNQALDFMGS
                     NPPGWGVNWACAMDVAIRAVNLIVAHDLFRANGVAFDAEFEDELALNLLAHGRHIAAH
                     LEWSERHRGNHYLADIVGLAFIAATLARSPETDVWLALAAQEIEAEILRQFLPDGGNF
                     EASTTYHRLSAEMALWGAALLLGLPEDRRAALRDYDAALWRRMPKLRPAPLPPLSEMS
                     LERLARALRFAADTVKPSGEIVQIGDNDSGRLVTLDPWSPLDVSHLLAAGAGLFGEPA
                     SVEALLVAQLACFTRRAPAPPAANAIAPVEETGPAERATRVVIAADGALDGLEPLAYP
                     DFGLFIWKNARAFVSVRCGPVGQNGQGGHAHNDQLAVEIEIDGIHWTRDPGSFTYTAD
                     LAARNRYRSVLAHFAPRDGTSEPARMLSPFSLEDLANARALAFDKGMFLGTHAGFGRP
                     VYRRVLVGDGAIVVEDLWGGPDIGPATRIAEHHVGSPAELAALWGLSVPFSPGYGLVK
                     K"
BASE COUNT          583 a         1588 c         1421 g          649 t
ORIGIN      
        1 ggcctgtggg tcgaggcggc ccagcccggc gccctggccg aggccgcccg caagctgtgc
       61 cacgatcccg ccctgcgcga cgatctggcc gcgcgcagcc tggccgccgc gccgctgcac
      121 tcgcgcgagc accaggccga acgcttcatc cgcgtgctgg aactggtcaa ggcgggccaa
      181 ggcccgaccc aggccggcac cgtcgaatcg tgatcccctt ggacttgccg ggccaacttc
      241 gctaatcatg ccgccatgaa ggtcaagccc tcgctcaacc gcgcccacgt cgccttcgcc
      301 catgacctgg tcatggcggc ggtgtcgttc ctggccgcga tcaacctgcg catgggcgat
      361 gccggcatcc ccggctggga cggcgccacg ctggccgtgg cgacggccac cttcaccgcc
      421 atcgccgccg ccgccttcct gtcggcgcgc atgtacaagg gcgtgtggcg ctatgcctcg
      481 gtcaacgacc tggtgacgct gacccgcggc gccaccatca ccatcgtggc gttctatctg
      541 ctgatgttcc tggtgacgcg cctgcaggac ctgccgcgca ccgtgctgat catcaattgg
      601 ttcgtgctgc tggcgctgct gggcgggccg cgcttcctct atcgcagctt caaggaccgc
      661 cgcctggccg ccaagatcgc cgccgacgac aagcgcatcc cggtgctgct ggtgggtgcc
      721 ggcgacgagg ccgagttgtt catccgcgcc acccgcgccc ccgacgccga atacggtgcc
      781 gtcggcctgg tcagcgagcg cggcgcccgg gtggggcgca acatccacgg catcgacgtg
      841 ctgggctcca tcgacgagct ggaagccgtg gtcgccgacc tcaaggccaa gggccgcgcg
      901 ccgcagcgcc tgatcatcac cgaccaccgc ctggacggcg gcgtggtgcg cttcctgttc
      961 gagaccgccg accgcctggg cttggccctg gctcgcatcc cgcgcctgac cgacctcaag
     1021 gacggcgtcg aggacaaggt ggtgatccgc cccatagcgg tcgaggattt gctgggccgg
     1081 ccgcaggcgg tgctggaccg cgccggcatg gaggcgctga tcaagggccg ccgcgtgctg
     1141 gtcaccggcg ccggcggttc catcgggtcc gagctggtgc gccagatctc ggattacggc
     1201 cccgaccgcc tcgtgctgtt cgagaattgt gaatacaacc tctacgccat cgacctggaa
     1261 ctggcgggcc gctgccccga tctcgaccgc cgcccggtac tgggcgacat ccgcgatgcc
     1321 gcccgcgtgc gcgccgccat ggccgagcac cgccccgatt tggtgttcca cgccgccgcc
     1381 ctcaagcacg tgcccatggt ggaatggaac ccggacgagg gcgtgctgac caatgcggtc
     1441 ggcacccgca tcgtcgccga tgcctgcgtc gaggccggcg tccaggtgat ggtgcagatc
     1501 tccaccgaca aggcggtcaa ccccaccaac gtcatgggcg ccagcaagcg cgtcgccgag
     1561 atgtacaccc aggcgctgga tctggccggc atctcgggcg gcacccgctt cgtcaccgtg
     1621 cgcttcggca acgtgctggg ctcgaccggc tcggtggtgc cgctgttcca gaagcagctt
     1681 gcccagggcg gcccgctgac cgtcacccat cccgacatga cccgctattt catgacggtg
     1741 cgcgaagcgg tcgagttggt gctgcaggcc tcggccttcg gggtggaaag ccccacctat
     1801 cgcggcaaga tcttcgttct cgacatgggg gagccggtca agatcgtcga cctggcgcgc
     1861 cagatgatcc ggctggccgg tctgcgcccc gagatcgacg tcgcgatcgc cttcaccggc
     1921 ctgcgccccg gcgagaagct gttcgaggaa atcttccacg gcgccgagcc gccgctgccg
     1981 accgagcgca agggcatcct gttcgcggcg ccgcgttcgg tggatgccga agaactgggc
     2041 cgcgccctgt cggaactcga ggccggctgc cgcgcccaca gcgccgagac ggtgctggcc
     2101 atcgtccgcc ggctggtgcc ggaatacgcc ccgcccgccg aggcgcgggt gcccgagctg
     2161 accccttgag cctgtcccac ctgatccgcc acgcgctgtc catgccgccc cacgtggtgg
     2221 cggccaaggg cgcccgcatg gccgggcgca tcctgcgcga ccgcctggtg gcggcgctga
     2281 tgaagaacca gaccacctat ccgccgccca gccaggccgc cggcggattg gcccgccgct
     2341 tccggccgct cgacccggcg gtgctggcgc ccatcgccga tgacctgcgc cgctgggccg
     2401 ccgaggcgcg cgcccaccgc ttcgacctgc tggggtcggg gccggtgcgg gtggtgcgcg
     2461 gcgagcgctt cggccgctat ggcatggccg cgcgcaccgc caccgactgg cgggctgcca
     2521 tcgctgcgga attgtggcgc ggcaaccgcg ccaccgcgca ttccatcctg ctgctgatcg
     2581 acgacgataa ctaccagccc atcgactggc aggccgattt ccgctcgggc tggcggtggt
     2641 cggtgcgcac ctggggcacc ggcatcgcct atgcccacaa ggacggcatc gacgtcaagg
     2701 tgccgtggga gttggcccgc ctgcagcacc tgccgcgcct cgccctggcc cacgcgctcg
     2761 acggcgaccg cgccctggcg cgcgagttcc gcaaccaggc actggacttc atgggttcga
     2821 acccgccggg ttggggcgtc aactgggcct gcgccatgga cgtcgccatc cgcgccgtca
     2881 acctgatcgt cgcccatgac ctgttccgcg ccaacggcgt cgccttcgac gccgagttcg
     2941 aggacgagct ggcgctgaac ctgctggccc acggccgcca catcgccgcc catctggaat
     3001 ggagcgagcg ccatcgcggc aaccactatc tcgccgacat cgtcggcctg gccttcatcg
     3061 ccgccacctt ggcccgctcg cccgagaccg acgtctggct ggcgctggcg gcccaggaga
     3121 tcgaggccga gatcctgcgc cagttcctgc ccgacggcgg caatttcgag gcctccacca
     3181 cctatcaccg cctgtcggcg gagatggccc tgtggggcgc cgccctgctc ctcggcctgc
     3241 ccgaggaccg ccgcgccgcc ctgcgggact acgatgccgc gctgtggcgc cgcatgccca
     3301 aactgcggcc ggcgccgctg ccgccgctgt cggaaatgtc gttggagcgt ttggcccgcg
     3361 cgctgcgctt cgccgccgac accgtcaagc cgtcgggcga gatcgtccag atcggcgaca
     3421 atgattccgg ccggctggtc acgctggacc catggtcgcc gctggacgtg tcgcatctgc
     3481 tcgccgccgg cgccggcctg ttcggcgagc cggcttcggt cgaggcgctg ctggtggcgc
     3541 aactggcctg cttcacccgc cgcgcgcccg ccccacccgc cgccaacgcc atcgcgccgg
     3601 tggaggaaac cggcccggcc gagcgcgcca cccgggtggt gatcgccgcc gacggcgcgt
     3661 tggacgggct ggaaccactc gcctatcccg atttcggcct gttcatctgg aagaacgccc
     3721 gcgctttcgt gtcggtgcgc tgcggccccg tcggccagaa cggccagggc ggccatgccc
     3781 ataacgacca gttggcggtg gagatcgaga tcgacggcat ccattggacc cgcgaccccg
     3841 gcagtttcac ctacaccgcc gatctggcgg cgcggaaccg ctaccgctcg gtgctggccc
     3901 atttcgcgcc gcgcgacggc accagcgagc cggcccgcat gctgtcgccc ttcagcctgg
     3961 aagacctcgc caacgcccgc gccctggcct tcgacaaagg catgttcctg gggacgcacg
     4021 cgggcttcgg ccggccggtc tatcgccgcg tcctggtggg cgacggcgcc atcgtggtcg
     4081 aggatctgtg gggcggcccc gacatcggcc ccgccacccg gatcgcggag catcacgtcg
     4141 gctcgcccgc cgaactggcg gccttgtggg gcctgagcgt gccgttctcg ccggggtatg
     4201 ggcttgtaaa aaaataggtt aaccacagag acacagaggc a
//
LOCUS       DATIKR010000635         4037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_130386, whole genome shotgun sequence.
ACCESSION   DATIKR010000635 DATIKR010000000
VERSION     DATIKR010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4037
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130386"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VLL76_10030"
     CDS             <1..209
                     /locus_tag="VLL76_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV29891.1"
                     /translation="DISACFHAGAAYPVSRDDCMRTLKLLHAFYRSDEAGGGAVAVDT
                     DDQSVRLGRPDEAISNLYRIPEAR"
     gene            209..1258
                     /locus_tag="VLL76_10035"
     CDS             209..1258
                     /locus_tag="VLL76_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV29892.1"
                     /translation="MAKLRVGIAGYGVVGQRRRQFIDKRDDMVTVAVCDQRLDGEGTY
                     ADGVRHYTHYRRLLESEQLDVLFVCLTNDVAPEVTIAGLELGLHVFCEKPPGRDVADI
                     ARVIACEKRHPGLKLKYGFNHRYHDSVRDALALVQSGELGRVLNLRGVYGKSAIIDFR
                     SPTHWRTKREIAGGGILLDQGIHMVDLIRLFGGEFDQIHSIVSNDFWHHDVEDNAYAL
                     MRSSTGVVAMLHSSATQWRHRFNLEITLSKGTIVLSGILSGSKSYGAETMTVAWAADN
                     DGGDPKEQTTRYNRDPSWKDEIAEFAESVLTGAPIANGSSDEALRTMHMVYRIYCADP
                     AWKERWGLDDTIPEC"
     gene            1261..2331
                     /locus_tag="VLL76_10040"
     CDS             1261..2331
                     /locus_tag="VLL76_10040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29893.1"
                     /translation="MHRRRKSRPGIAGNLVALVLGLVASLAVFEGMSRVAFPAWRDFH
                     SGRFMTRTIVPGYPILAVGVAGFDGGFAHNDGDFNVRIRLNDLGLRNDEPTSAAGDRI
                     WVIGDSFMFGWGVERDDMLSSQLAAVGGRPTFNLASPGEGLCGYQALVARMPKELRPS
                     AMVVGITIENDTGIIECKPATAAELPPEEANWSKTGIKRMLSAYFASYNVVSVTTKRI
                     APLRDVLVSLGVVERENQSHYNFDPARVEESVASMVGEIAKLRALAPDVPFVALMIPA
                     RTDLIDQDPVYRAVRERLGDALRQAGHPVADPFARLAAEGLGRVHFTHDGHWSPLGHR
                     IAAEAVAETLAPLFAATQEPAP"
     gene            2328..3092
                     /locus_tag="VLL76_10045"
     CDS             2328..3092
                     /locus_tag="VLL76_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HSV29894.1"
                     /translation="MKIVGLVPARMAASRFPGKPMFKLSGRPMVEHCFLRAAKYPKWD
                     LLALCTCDSEIADFGTSKGWPVIWTKDTHTRALDRVAEAATKCGVELADDDVVVCVQG
                     DEPMLRPEMIEAVVSPFETDPSVKGTMLGVHITDEEMWRNPDIVKIVHDLAGNVLYTS
                     RAPIPYAKTFSPDLGARRVGGIFGFRWKFLRWFTETPESPLEKKEACDSNRIPDNGFF
                     QRVAPFPATTYFSVDSPSDADLVENAMKADPLWGSY"
     gene            3092..3748
                     /gene="gph"
                     /locus_tag="VLL76_10050"
     CDS             3092..3748
                     /gene="gph"
                     /locus_tag="VLL76_10050"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01449.2"
                     /note="PGP is an essential enzyme in the glycolate salvage
                     pathway in higher organisms (photorespiration in plants).
                     Phosphoglycolate results from the oxidase activity of
                     RubisCO in the Calvin cycle when concentrations of carbon
                     dioxide are low relative to oxygen. This enzyme is a
                     member of the Haloacid Dehalogenase (HAD) superfamily of
                     aspartate-nucleophile hydrolase enzymes (PF00702); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA];
                     GO_process: GO:0009853 - photorespiration [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HSV29895.1"
                     /translation="MARAVVFDLDGTLIDSAPDVAHALNRLLAEEGRRQLALPEVQEL
                     VGEGAGALIERAFAATGAPAAEVPPLVARYLAFYRQAPADHTVVYDGVRDELARLRAA
                     GVKVGICTNKPHAMTLVVLDALGLAPMFDAVLGGDFPRRKPDGEHIRETLRLMAAEGA
                     SAVYVGDSITDVRAARDAGLPVVAVDWGYARMPVERLGADRLISHYRELPAMLEELWP
                     "
     gene            3745..>4037
                     /locus_tag="VLL76_10055"
     CDS             3745..>4037
                     /locus_tag="VLL76_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HSV29896.1"
                     /translation="MKVAVASRSFSRHPVLRAELLARHPDVTFNETGASLSGAALVDF
                     LSGHDAAITALERVDDALLAALPDLKVIGKYGVGLDMLDLDAIRRRGIRLGWTG"
BASE COUNT          631 a         1451 c         1313 g          642 t
ORIGIN      
        1 gcgacatctc ggcctgcttc cacgccggcg ccgcctatcc ggtcagccgc gacgattgca
       61 tgcgcacgct gaagctgctg cacgccttct accgctcgga cgaggccggc ggcggcgccg
      121 tcgcggtgga caccgacgac cagtcggtgc gcctgggccg gccggacgag gcgatctcga
      181 acctctatcg cattccggag gcccgctgat ggccaagttg cgcgtcggca tcgccggcta
      241 cggcgtggtc ggccagcgcc gccgccagtt catcgacaag cgcgacgaca tggtgacggt
      301 cgcggtgtgc gaccagcggc tggacggcga gggcacctat gccgacggcg tgcgccacta
      361 cacccactac cgccgcctgc tggaatccga gcaactggac gttctgttcg tctgcctgac
      421 caacgacgtc gcgcccgagg tcaccatcgc cggcctggaa ctgggcctgc acgtcttctg
      481 cgagaagccg ccgggccgcg acgtcgccga catcgcccgc gtcatcgcat gcgagaagcg
      541 ccatcccggc ctcaagctga aatacggctt caaccaccgc taccacgatt cggtgcgcga
      601 cgcgctggcg ctggtgcagt cgggcgagct gggccgcgtg ctgaacctgc gtggcgtcta
      661 cggcaagtcg gcgatcatcg acttccgctc gcccacccat tggcgcacca agcgcgaaat
      721 cgccggtggc ggcatcctgc tcgaccaggg catccacatg gtcgacctga tccgtctgtt
      781 cggcggcgag ttcgaccaga tccattccat cgtgtccaac gacttctggc atcacgacgt
      841 cgaggacaac gcctatgccc tgatgcgctc gtccaccggc gtggtggcca tgctgcattc
      901 gtcggcgacc cagtggcggc accgcttcaa cctggaaatc accctgtcca agggcaccat
      961 cgtgctgtcg ggcatcctgt cgggctcgaa atcctatggc gccgagacca tgaccgtggc
     1021 ctgggccgcc gacaacgacg gcggcgatcc caaggaacag accacccgct acaaccgcga
     1081 ccccagttgg aaagacgaga tcgccgaatt cgccgaatcc gtgctgaccg gcgcgcccat
     1141 cgccaacgga tcgtccgacg aggcgctgag gaccatgcac atggtctacc gcatctattg
     1201 cgccgacccc gcctggaaag agcgctgggg cctcgacgac accatcccgg agtgctgacg
     1261 atgcatcgcc gcaggaagtc gcgccccggc atcgccggca acctggtcgc cctggtgttg
     1321 gggcttgtcg cctcgctggc ggtgttcgag ggcatgtcgc gcgtcgcctt cccggcctgg
     1381 cgcgatttcc attccggccg tttcatgacc cgaaccatcg ttcccggcta tccgatcctc
     1441 gcggtcggcg tcgccggctt cgacggcggc ttcgcccaca acgacggcga tttcaacgtc
     1501 cgaatccgcc tcaacgacct ggggctgcgc aacgacgaac ccacttcggc ggcgggcgac
     1561 cgcatctggg tgatcggcga ttccttcatg ttcggatggg gggttgagcg cgacgacatg
     1621 ctgtcgtccc aactggcggc cgtcggcggc cgcccgacct tcaacctcgc cagccccggc
     1681 gagggcctgt gcggctatca ggctctcgtg gcgcgcatgc ccaaggagct gcggccgtcg
     1741 gcgatggtcg tcggcatcac catcgagaac gacaccggca tcatcgagtg caagccggcg
     1801 accgcggccg agttgccgcc cgaggaggcc aactggtcca agaccggcat caagcgcatg
     1861 ctgtcggcct atttcgcgtc ctacaacgtg gtcagcgtca ccaccaagcg gatcgcgcca
     1921 ttgcgcgatg tcctggtgtc gctgggggtg gtcgagcgcg agaaccaatc ccactacaat
     1981 ttcgatcccg cccgggtcga ggaatcggtc gccagcatgg tcggcgagat cgccaagctg
     2041 cgcgcgctgg ctcccgacgt gccgttcgtg gcgctgatga tccccgcccg caccgacctg
     2101 atcgaccagg acccggtcta ccgggcggtg cgcgaacggc tgggcgacgc gctgcgccag
     2161 gccggccatc cggtcgccga ccccttcgcg cgcctggccg ccgagggatt gggccgcgtc
     2221 cacttcaccc atgacggcca ctggtcgccg ctcggacacc gcatcgcggc cgaggcggtg
     2281 gccgagaccc tggccccgct gttcgccgcc acccaggaac ccgcaccatg aagatcgtcg
     2341 gtctcgtccc cgcccgcatg gccgccagcc gctttcccgg caagcccatg ttcaagctgt
     2401 ccggccgtcc catggtcgag cattgcttcc tgcgcgccgc caaatacccc aagtgggatc
     2461 tgctggcgct gtgcacctgc gacagcgaga tcgccgattt cggcacgtcc aagggctggc
     2521 cggtgatctg gaccaaggac acccacaccc gcgcgctcga tcgcgtcgcc gaggcggcga
     2581 ccaaatgcgg cgtcgagctg gccgacgacg acgtggtggt ctgcgtccag ggcgacgagc
     2641 ccatgctgcg gcccgagatg atcgaggcgg tggtgtcgcc gttcgagacc gacccgagcg
     2701 tcaaaggcac catgctgggc gtgcacatca ccgacgagga gatgtggcgc aatcccgaca
     2761 tcgtgaagat cgtccacgat ctggccggca acgtgctgta cacctcgcgc gcgccaatcc
     2821 cctacgccaa gacgttttcg ccggacctgg gggcgcggcg cgtcggcggc atcttcggct
     2881 tccgctggaa gttcctgcgt tggttcacgg aaacccccga atcgccgctg gagaagaagg
     2941 aagcctgcga ctccaaccgc atccccgaca acggcttctt ccagcgcgtg gcgcccttcc
     3001 cggccaccac gtatttctcg gtggacagcc cgtccgacgc cgatttggtc gagaacgcca
     3061 tgaaggccga cccgctgtgg ggcagctatt gatggccagg gccgtcgtct tcgacctgga
     3121 cggcaccctg atcgacagcg ctcccgacgt cgcccacgcg ctgaaccgcc tgctggccga
     3181 ggaaggccgc cgccagctgg ctctgcccga ggtccaggaa ctggtgggcg aaggcgccgg
     3241 cgcattgatc gaacgcgcct tcgccgccac cggcgcgccc gccgccgagg tgccgccgct
     3301 ggtggcgcgc tatctcgcct tctaccgcca ggctccggcc gaccacacgg tggtctacga
     3361 cggcgtgcgc gacgagctgg cgcgcctcag ggccgccggg gtcaaggtgg gcatctgcac
     3421 caacaagccg cacgccatga ccctggtggt gctcgacgcc ctggggctgg cgccgatgtt
     3481 cgacgccgtg ctgggcggcg atttcccccg ccgcaagccc gatggcgagc acatccgcga
     3541 gactctgagg ctgatggcgg ccgagggggc gtcggcggtc tatgtcggcg attccatcac
     3601 cgacgtgcgc gccgcgcgcg acgccggcct gccggtggtg gcggtggatt ggggctatgc
     3661 ccgcatgccg gtcgagcgat tgggcgccga ccggctgatc tcgcattacc gcgaattacc
     3721 cgcaatgctc gaggagcttt ggccatgaag gtcgccgtcg cgtcgcgctc gttttcgcgc
     3781 cacccggtgc tgcgcgccga attgctggcg cgccacccgg acgtcacctt caacgagacc
     3841 ggcgccagcc tcagcggagc cgcgctggtg gatttcctgt ccggccacga cgccgccatc
     3901 accgcgctgg agcgggtgga cgacgccctg ctggcggcgc tgccggacct caaagtgatc
     3961 ggcaaatacg gcgtcggcct cgacatgctc gacctcgacg ccatccgccg gcgcggcatc
     4021 cgcctgggct ggaccgg
//
LOCUS       DATIKR010000636         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_106557, whole genome shotgun sequence.
ACCESSION   DATIKR010000636 DATIKR010000000
VERSION     DATIKR010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106557"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VLL76_10060"
     CDS             <1..625
                     /locus_tag="VLL76_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV29897.1"
                     /translation="TGAILLWADTAASLARLGLGLAVATAGGLVVGIANGLLPYVRAG
                     LSPLVAVVSLVPPMAILPILFIVFGLDELSKVVLIVIGIAPFLMRDLQARVEEMPREQ
                     LIKAQTLGASSWQIVLRVVLPQMLPRLIDSLRLSLGPAWLFLISAEAIAAEVGLGYRI
                     FLVRRYLAMDVILPYVAWITLLAFLADLALRAVNRRLFPWLEAGKGA"
     gene            627..1400
                     /locus_tag="VLL76_10065"
     CDS             627..1400
                     /locus_tag="VLL76_10065"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018606940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV29898.1"
                     /translation="MTQVTIRQVWKEYDGAVVLERVNLDIEPHSFVSIVGPSGCGKST
                     FLRMLLSQETPSRGFIRIDGEDLSPEPTEERGVVFQRYSVFPHLTALENVAFGLEVAR
                     APFLGRLFGSRRKAVLEESHEALASVGLDHAAGKYPAQMSGGMQQRLAIAQALIKRPK
                     VLLLDEPFGALDPGIRADMHRLMLKLFDETGMTVFMVTHDLKEAFHLGTRLVAFDRTK
                     TRPEEIGAYGATITLDMPLDRVTARERSEAMADLAARTE"
     gene            1485..2210
                     /locus_tag="VLL76_10070"
     CDS             1485..2210
                     /locus_tag="VLL76_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea amidolyase associated protein UAAP1"
                     /protein_id="HSV29899.1"
                     /translation="MSVLYEDRLDGGKHWSMVVKRGIALKLVDIEGGANVGMMFYSPA
                     NPLERYNAPDTLKCQHTFKLTRGNCLYSDMGRIFCSIVEDSVGWHDTVCGNTTKAMVA
                     AKWGLKDYQTHRNGWTLNGHDSFLVEGGKYGLGRRDIAANVNWFSKVAVADDGAMVFD
                     PANSKAGDHVTLRFEMDTLVLLHTCPHPLNPAAGYPRKPVAYQLLKADPVAEDDYCRT
                     FRPENGRGFENNRIFHLCCGGEG"
     gene            2215..>2698
                     /locus_tag="VLL76_10075"
     CDS             2215..>2698
                     /locus_tag="VLL76_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009705079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1989 domain-containing protein"
                     /protein_id="HSV29900.1"
                     /translation="MIKHSPLNPADATTRATIPAGDYWMQVVRKGEILRIVDTDGNQA
                     ADTLFYAAADPAERYSASDTIREQGNVYLGVGSKLLSQECNVMLEITADTVGRHDTLG
                     GACATESNTVRYALDKKTMHACRDSYLLALAENDQYGLTKRDLAHNINFFMNVPITPD
                     G"
BASE COUNT          465 a          933 c          860 g          440 t
ORIGIN      
        1 caccggcgcc atcctgttgt gggccgacac cgccgccagc ctcgcccgtc tgggactggg
       61 gctggcggtg gccaccgccg gcgggctggt ggtgggcatc gccaacggtc ttttgcccta
      121 cgtgcgggcg gggctgtccc cgctggtggc ggtggtctcg ctggtaccgc caatggcgat
      181 cctgcccatc ctgttcatcg tgttcggact ggacgaactg tccaaggtgg tgctgatcgt
      241 catcggcatc gcgcccttcc tgatgcgcga cctgcaggcg cgggtcgagg aaatgccgcg
      301 cgagcagttg atcaaggccc agaccctggg cgccagttcc tggcagatcg tgctgcgggt
      361 ggtgttgccc cagatgttgc cgcgcctgat cgattccctg cggctttcgc tgggtccggc
      421 ctggctgttc ctgatctcgg ccgaggccat cgccgccgag gtcggcctgg gctaccgcat
      481 cttcctggtt cggcgctatc tggccatgga tgtgatcctg ccctatgtgg cctggatcac
      541 cctgctggcc ttcctggccg acctggccct gcgggcggtc aatcgccgcc tgttcccgtg
      601 gcttgaagcc ggaaaggggg cgtgacatga cccaggtcac catccggcag gtgtggaagg
      661 aatatgacgg cgcggtggtg ctggaacgcg tcaacctgga catcgaaccc cattccttcg
      721 tctccattgt cgggccctcg ggctgcggca agtccacctt cctgcgcatg ctgctcagcc
      781 aggaaacccc atcgcgcggc ttcatccgaa tcgacggcga ggacctgtcg cccgaaccca
      841 ccgaggaacg cggcgtcgta ttccagcgct attcggtgtt cccgcacctc acggcgctgg
      901 aaaacgtcgc gttcggactg gaagtggcgc gcgcgccctt cctgggccgc ctgttcggca
      961 gccggcgcaa ggcggtgctg gaggaaagcc acgaggccct ggcctcggtg gggctggacc
     1021 acgccgccgg caagtatcct gcccagatgt cgggtggcat gcagcagcgc ctggccatcg
     1081 cccaggccct gatcaagagg cccaaggtgc tgctgctgga cgagccgttc ggcgccctgg
     1141 accccggcat ccgcgccgac atgcaccggc tgatgctgaa gctgttcgac gagaccggca
     1201 tgaccgtctt catggtcacc cacgacttga aggaggcgtt ccacctgggc acccgcctgg
     1261 tcgccttcga ccgcaccaag acccggccgg aagagatcgg cgcctatggc gccaccatca
     1321 ccctggatat gccgctggac cgcgtcaccg cccgcgaacg cagcgaggcg atggccgatc
     1381 tggccgccag gaccgaatag aaccaacccg ccccggccgg gacgacccgg cccacgcaaa
     1441 aggggccttt tcggaccggg acgacccggc cagaggaggc agcaatgtcc gtgctgtacg
     1501 aagaccgcct ggacggcggc aagcactggt cgatggtggt caagcgcggg atcgcgctga
     1561 agctggtcga catcgaaggc ggcgccaacg tgggcatgat gttctacagc cccgccaacc
     1621 cgctggaacg ctacaacgcg cccgacacgc tgaagtgcca gcacaccttc aagctgacgc
     1681 gcggaaactg cctgtattcc gacatggggc gcatcttctg ttccatcgtc gaggacagcg
     1741 tcggctggca cgacaccgtg tgcggcaaca ccaccaaggc catggtggcg gcgaagtggg
     1801 gcctcaagga ctaccagacc caccgcaacg ggtggacgct gaacggccat gattccttcc
     1861 tggtggaggg cggcaagtac ggcctgggcc ggcgcgacat cgccgccaac gtcaactggt
     1921 tcagcaaagt ggcggtggcc gacgacggcg cgatggtgtt cgacccggcc aattccaagg
     1981 ccggcgacca cgtcaccctg cggttcgaga tggacacgct agtgctgctc cacacctgcc
     2041 cgcatccgct gaacccggcg gccgggtatc cccgcaagcc ggtggcttat cagttgctga
     2101 aggcggaccc ggtggccgag gacgattatt gccgcacctt ccggcccgag aacgggcgcg
     2161 gcttcgagaa caaccgcatc ttccacctgt gctgcggcgg ggagggctga acccatgatc
     2221 aagcacagcc ccctcaaccc cgccgacgcc accactcgcg ccaccatccc ggccggcgat
     2281 tactggatgc aggtggtccg taagggcgag atcctgcgca tcgtcgatac cgacggcaac
     2341 caggcggccg acactctgtt ctatgccgcc gccgacccgg ccgaacgcta ttccgccagc
     2401 gacaccatcc gcgaacaggg caacgtctat ctgggcgtgg gcagcaagct tctgtcccag
     2461 gaatgcaacg tgatgctgga gatcaccgcc gacacggtcg gccgccacga caccctgggc
     2521 ggcgcctgcg ccaccgaatc caacacggtg cgctatgccc tggacaagaa gaccatgcac
     2581 gcctgccgcg attcctacct tttggcgctg gccgagaacg accagtacgg cctgaccaaa
     2641 cgcgacctgg cccacaacat caacttcttc atgaacgtgc ccatcacccc cgacggcg
//
LOCUS       DATIKR010000637         2223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_21485, whole genome shotgun sequence.
ACCESSION   DATIKR010000637 DATIKR010000000
VERSION     DATIKR010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21485"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1122
                     /locus_tag="VLL76_10080"
     CDS             <1..1122
                     /locus_tag="VLL76_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29901.1"
                     /translation="DAEAGMAERVAGCQVVINAAGLVRGRGANTLEAVHAEGAERLFH
                     ACVRAGVPRLIHISALGASSAGITAYQRTKGRAEDALAKIKGLDWCVLRPSVVVGRGG
                     ASTTVLAALAALPLPPRIGPGTWRVQPVHVDDLAALVVRLVEQDGPLPRSLDVVGPEP
                     MTTDGLTAALRAWLGLQPRPFLLVPEALLGVAAAVGERLMDGPMNREIVTMLKGGNVS
                     NPASVTAALGRPPRRMEEALARHPATEADRWHARLFFLRPLLRWSLGLLWVATGLLSF
                     GLYPVADSHRMLAEVGLSGLPADAALYGAAAVDLALGALLLARWRPVAVGTAMLATMA
                     AFSLIALGLPAEYWLHPFAPLLKNLPIAAATLVMMALEA"
     gene            1126..1593
                     /locus_tag="VLL76_10085"
     CDS             1126..1593
                     /locus_tag="VLL76_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009148185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2269 domain-containing protein"
                     /protein_id="HSV29902.1"
                     /translation="MDALTLKLIHILSAILLFGTGLGTAFHGMASNLSKDVRAIAVAN
                     RNVVLADWLFTTPTVIIQPVTGIWLAVEQGWPLTTGWIVVSLVLYALAGACWLPVVWL
                     QLRMRRIADKAVATGTDLPPLYHRYFRIWFALGWPAFAAMVAIVGLMVFKPEI"
     gene            1608..1943
                     /locus_tag="VLL76_10090"
     CDS             1608..1943
                     /locus_tag="VLL76_10090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HSV29903.1"
                     /translation="MTITTPFQRLLGAAFDHLPAPVRRFHGLSSAMATAGVAEITAAS
                     NPAAWLLCKVAGLPKPGSDIPVTVSFHPDGAGREFWDRHFASRRYASTMEAGQGADEG
                     LLIEHFGPG"
     gene            complement(1936..2181)
                     /locus_tag="VLL76_10095"
                     /pseudo
     CDS             complement(1936..2181)
                     /locus_tag="VLL76_10095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          295 a          782 c          730 g          416 t
ORIGIN      
        1 gacgccgagg ccggcatggc cgaacgcgtc gccggctgcc aggtcgttat caatgccgcc
       61 gggctggtgc gcggccgggg cgccaacacg ctggaggccg tccacgccga aggggcggag
      121 cggctgttcc atgcctgcgt ccgtgccggg gtgcctcggc tgatccatat atccgctttg
      181 ggggcgtcct cggccggcat caccgcgtac cagcgcacca aaggccgggc cgaagacgcg
      241 ttagccaaga tcaaggggct ggactggtgc gtattgcggc cctcggtggt ggtcgggcgt
      301 ggcggggcca gcacgacggt gctcgccgcc ctggcggccc tgccgctgcc gccccgcatc
      361 ggccccggca cttggcgggt ccagccggtg catgtggacg accttgcggc gctggtggtt
      421 cgtctggtcg agcaagacgg gccactgcct cggtcgctcg acgtggtcgg ccccgagccg
      481 atgaccaccg acggtttgac ggctgccctg cgggcatggc tggggctgca gccgcgcccg
      541 tttctgctgg tgccggaggc gctcttgggt gttgccgcgg cggtgggcga gcggttgatg
      601 gacggtccca tgaaccgcga gatcgtcacc atgctgaaag gcggcaacgt ctcgaatccg
      661 gcatcggtca ccgccgccct ggggcgcccg cctcgccgga tggaagaggc gttggcgcgc
      721 catccggcca ccgaggccga tcgctggcat gcgcgcctgt tcttcctgcg cccgctgctg
      781 cgttggagtc tcggtttgct gtgggtggcc accgggttgc tgtcgttcgg cctttatccg
      841 gtcgccgaca gccaccgcat gttggccgag gtcggactat ccgggctgcc ggcggatgcc
      901 gcgctgtacg gcgccgccgc cgtcgatctt gccctgggag cgctgttgct cgcccgttgg
      961 cggccggtcg cggtcggcac ggccatgctt gcgaccatgg ccgccttcag cctgatcgcg
     1021 ctcggcctgc ccgccgaata ctggctgcac cctttcgccc ccttgctcaa gaacctgccc
     1081 atcgccgccg cgacgctggt gatgatggcg ctggaggctt gatccatgga cgccttgacg
     1141 ctcaagctga tccacatcct gtccgccatc ctgctgttcg gcaccggcct gggcaccgcc
     1201 ttccatggca tggccagcaa cctgtccaag gatgtgcggg ccatcgcggt ggcaaaccgc
     1261 aacgtggtcc tggccgactg gctgttcacc accccgaccg tgatcattca gccggtcacc
     1321 ggcatctggc tggccgtcga acagggttgg ccgctgacca ccggctggat cgtggtctcg
     1381 ctggtgcttt atgccctggc cggggcgtgc tggctcccgg tggtctggct gcagctccgc
     1441 atgcgccgga tcgccgacaa agccgtcgcc accggcaccg acctgccgcc gctctatcac
     1501 cgctatttcc gcatctggtt cgcactgggc tggccggcct tcgccgccat ggtcgccatc
     1561 gtgggcctga tggtgttcaa gccagaaatc tgagagggag accgaccatg accatcacca
     1621 ccccgttcca gcgcctgctc ggcgccgcct tcgaccactt gcccgcgccg gtgcgcaggt
     1681 ttcacggcct ttcgtcagcg atggccaccg ccggtgttgc cgagatcacc gccgcttcca
     1741 atcccgccgc ctggctgctg tgcaaggtcg ccggcctgcc caagcccggt tcggacattc
     1801 ccgtgaccgt ctcgttccat ccggatgggg caggccggga attctgggat cggcacttcg
     1861 ccagccggcg ctacgccagc accatggaag ccggccaggg cgccgacgag ggcctgttga
     1921 tcgagcattt cggcccaggc tgaggtcggc cacaaggcgc ttcagcttga gattctcctc
     1981 ctcaagctga cgcagcttac gcagctcaga cggccccagt ccgccgtatt tctgcttcca
     2041 gcggaagcag gtcgcctccg acacgcccat cttccggcag acctccgcta ccggcgtgcc
     2101 aaggtccgct tggcgtagcg caaacgcgat ttgctcctcg gtgaacttcg atttctcatc
     2161 gacaagatcc ccctgcttca ggtttcaaat cttgccggaa aactctcctt ttcgccggag
     2221 gag
//
LOCUS       DATIKR010000638         3205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_9866, whole genome shotgun sequence.
ACCESSION   DATIKR010000638 DATIKR010000000
VERSION     DATIKR010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9866"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VLL76_10100"
     CDS             complement(<1..291)
                     /locus_tag="VLL76_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29904.1"
                     /translation="MSVQWTRHGQRLEAELAVAFEMGYRRLVRARSPGQLDQAITYNL
                     RLWRAARRLALTGRTAGVREDVPDTADLVASLLVAAPKACPDPRDMDFIAGRD"
     gene            complement(447..1028)
                     /locus_tag="VLL76_10105"
     CDS             complement(447..1028)
                     /locus_tag="VLL76_10105"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV29905.1"
                     /translation="MTGLHHTPLPVVIRDATEADMAQVQSIYTFYVTRTAASFEEEPP
                     GVDEMIRRRAATLERGLPFLVAEEKGEVLGYTYAGPFRSRSAYRYTVEDSIYVAPFVV
                     RRGIGRQLLGGLIDRCTALGYRQMIGVIGDSANQGSIALHRALGFRQEGVLRGVGLKF
                     GRWVDVVIMHRELHGDDRPLPDGRIAPPLPKMP"
     gene            complement(1025..1912)
                     /locus_tag="VLL76_10110"
     CDS             complement(1025..1912)
                     /locus_tag="VLL76_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HSV29906.1"
                     /translation="MDSTPLPTFDDSRVLTVLAPPEQTVPLVFASPHSGRDYPAEFVQ
                     ASKLDAAALRRSEDSFVDELFACAPGHGAPLLAALFPRAYCDPNREPYELDPGMFSGQ
                     LPSYANTRSPRVAAGLGTIARVVASGAEIYRERLPVAEAEHRVAQFYRPYHARLRSLV
                     DRTKDKFGWSLLVDCHSMPSVGGPMDRDMGLSRVDVVLGDSFGAACAPGITQTVEDAF
                     RARGYRVVRNTPYAGGFTTRHYGQPRNGSHALQIELNRALYMDEARHAKTAGFDALAA
                     DLERVVGALAELTREQAVP"
     gene            2072..2146
                     /locus_tag="VLL76_10115"
     tRNA            2072..2146
                     /locus_tag="VLL76_10115"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2104..2106,aa:Val,seq:gac)
     gene            complement(2192..>3205)
                     /locus_tag="VLL76_10120"
     CDS             complement(2192..>3205)
                     /locus_tag="VLL76_10120"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV29907.1"
                     /translation="RVTAWARVALDRRDDIANLRRTLFEGLFYILTAIVFGTVCALWI
                     AKRLTADFKHLGEAVDQLRRGNRDIPPLDQPAQEIARVESAFVAMAETIWNREDDLRH
                     TINRLAASNTDLERFAYIASHDLQEPLRNVVSFSQLLEKRYKGKLDPDADQFIDFIVE
                     GGKRMSLQVQGLLDFSRVDSKGHAFENVPMAQVVQSALNNLAEAVAQSGAELDIPDLP
                     VVHGDEIQLMLLFQNLIGNAIKFRRPEQKPRITLRWAPVGALLEFRVCDNGIGVDPAL
                     ADDIFMIFRRLHTPGQYTGRGIGLAICRRIAQRHGGTIHCEPNPTGGACFVVTLPAAV
                     GEG"
BASE COUNT          515 a         1051 c         1135 g          504 t
ORIGIN      
        1 gtcgcggccg gcgatgaaat ccatgtcgcg gggatcgggg caggccttgg gcgccgccac
       61 cagcaggctg gcgaccaggt cggcggtgtc ggggacgtcc tcgcgcacgc cggcggtgcg
      121 gccggtcagg gccagccggc gcgcggcgcg ccacaggcgc aggttatagg tgatggcctg
      181 gtcgagctgg ccgggcgagc gcgcccgcac caaacgccta taccccatct cgaaggcgac
      241 cgccaactcc gcttccagcc gctggccatg cctggtccat tgcacgctca tggcgtcctc
      301 ctccctggtc gacggttcct ggtcttggtc cggagtttct acaaccggtt gccgtcgagc
      361 ttaatacgga aggggtccag ttcggtcagg cgcggaggcc tatacccatt tggtggtggt
      421 ggctatgatt tcagcccgct cgccgttcaa ggcatcttcg gcagcggcgg cgcgatgcgg
      481 ccgtcgggca gcgggcggtc gtcgccgtgc aattcgcggt gcatgatcac cacgtcgacc
      541 cagcggccga acttcagtcc gacgccgcgc agcacgcctt cctggcggaa gcccagcgcg
      601 cggtgcagcg cgatcgagcc ctggttggcg gaatcgccga tgacgccgat catctggcgg
      661 tagcccaagg cggtgcagcg gtcgatcagg ccgcccagca actggcggcc gatgccccgg
      721 cgcaccacga acggcgccac ataaatggaa tcctcgaccg tatagcgata ggccgagcgc
      781 gagcggaacg ggccggcata ggtgtagccc agcacctcgc ccttctcttc ggccaccaga
      841 aagggcagcc cgcgttccag cgtggcggcg cggcggcgga tcatctcgtc cacgccgggc
      901 ggctcctcct cgaacgaggc ggcggtgcgg gtgacgtaga acgtatagat cgactgcacc
      961 tgggccatgt cggcctcggt ggcgtcgcgg atcacgacgg gcagcggggt atggtgcaat
     1021 ccggtcatgg cacggcctgc tcgcgcgtca gttccgccag ggcgcccacc acccgctcga
     1081 gatcggccgc cagggcgtcg aagccggccg tcttggcgtg gcgggcctcg tccatgtaaa
     1141 gggcgcggtt cagttcgatc tgcagcgcat ggctgccgtt gcgcggctgg ccgtaatggc
     1201 gggtggtgaa gccgccggca tagggggtgt tgcgcaccac ccggtagccc cgcgcgcgaa
     1261 acgcgtcctc caccgtctgg gtgatgcccg gggcacaggc ggcgccgaac gaatcgccca
     1321 gcaccacgtc cacccgcgac agccccatgt cgcggtccat cggcccgccg accgacggca
     1381 tggaatggca atccaccagc agcgaccagc cgaacttgtc cttggtccgg tcgaccaggg
     1441 accgcaggcg ggcgtggtag ggccgataga attgagcgac gcggtgctcg gcctcggcca
     1501 ccggcaggcg ctcgcgatag atctcggcgc cgctggcgac cacccgggcg atggtgccca
     1561 ggccggcggc gacgcgcggg ctgcgggtgt tggcatagga cggcaactgg ccgctgaaca
     1621 tgccggggtc cagctcgtac ggctcacggt tgggatcgca ataggcgcgc gggaacagcg
     1681 ccgccagaag cggcgcgccg tggccgggcg cacaggcgaa cagctcgtcc acgaaactgt
     1741 cctcggaccg ccgcagcgcg gccgcatcca gtttcgacgc ctggacgaat tcggccggat
     1801 agtcgcggcc cgaatgcggc gaggcgaaga cgagcggcac cgtctgttcc ggcggagcta
     1861 agaccgtgag gacccggctg tcgtcgaagg tcggaagcgg cgtgctgtcc atgccagagg
     1921 tattagcagg ttgcaggccc gctgtcacac ggcctgttcc acccctccca catggcgccg
     1981 ccgcaagttt tttggagacc atgcaaaagt gcttgccaag ggtcggagaa ggagttacat
     2041 acggcgccct cgacgccgct tacggcgcga cgggcggtta gctcagcggg agagcactac
     2101 gttgacatcg taggggtcac tggttcaatc ccagtaccgc ccaccatcga aggccccagg
     2161 gaaacctggg gccttcgtcc gttttgcccc cctacccctc ccccaccgcc gccggcaggg
     2221 tcaccacgaa gcaggcgccg cccgtggggt tgggctcgca gtggatggtg ccgccgtggc
     2281 gttgggcgat gcggcggcag atggccaggc cgatgcctcg gccggtatat tgcccggggg
     2341 tgtgcagccg gcggaagatc atgaagatgt cgtcggccag ggcgggatcg acgccgatgc
     2401 cgttgtcgca gacgcggaat tccagcaacg cccccaccgg cgcccagcgc agggtgatgc
     2461 gcggcttttg ctcggggcgg cggaacttga tggcgttgcc gatcaggttc tggaacagca
     2521 gcatcaattg gatctcgtcg ccgtgcacga ccggcaggtc ggggatgtcc agttcggctc
     2581 ccgactgggc caccgcctcg gccaaattgt tcagggccga ctgcaccacc tgcgccatgg
     2641 ggacgttctc gaacgcgtgg cccttggaat cgacgcgcga gaagtccagc aggccctgca
     2701 cctgcagcga catgcgcttg ccgccctcga cgatgaagtc gatgaactgg tcggcgtcgg
     2761 ggtcgagctt gcccttgtag cgcttctcca gaagctgcga gaagctgacc acgttgcgca
     2821 acggttcctg caggtcgtgc gaggcgatgt aggcgaagcg ctcgaggtcg gtgttggacg
     2881 ccgccagccg gttgatggtg tggcgcagat cgtcctcgcg gttccagatg gtttcggcca
     2941 tggcgacgaa ggcgctctcg acgcgggcga tttcctgggc cggctggtcc agcggcggga
     3001 tgtcgcggtt gccccggcgc aactggtcga cggcctcgcc caaatgcttg aaatcggccg
     3061 tcagccgctt ggcgatccac aaggcgcaga cggtgccgaa cacgatggcc gtcaggatgt
     3121 agaacagccc ctcgaacagg gtgcggcgca aattggcgat gtcgtcgcgg cggtccagcg
     3181 cgacgcgagc ccaggcggtg acgcg
//
LOCUS       DATIKR010000639         3138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_203045, whole genome shotgun sequence.
ACCESSION   DATIKR010000639 DATIKR010000000
VERSION     DATIKR010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203045"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1577)
                     /locus_tag="VLL76_10125"
     CDS             complement(<1..1577)
                     /locus_tag="VLL76_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSV29908.1"
                     /translation="MTQGSTPEAKAPTREKPWLFRTYSGHSSAAESNKLFRTNLTKGQ
                     TGLSIAFDLPTQTGYDSDHALARGEVGKVGVPVCHIGDMQTLFEGIPLEKMNTSMTIN
                     APAPWLLSLYIATAEKQGAARASLNGTTQNDIIKEYLSRGTYIFAPQPSLKLTSDVIA
                     FTYREVPKWNPMNVCSYHLQEAGATPEQELAYALATAIAVLDTVRPTVPAEDFPVVVS
                     RISFFVNAGIRFVTELCKMRSFTYLWDQICRERYGITDEKARRFRYGVQVNSLGLTEP
                     QPENNVYRILLEMLAVVLSKDARARAVQLPAWNEALGLPRPWDQQWSLRLQQIVAYET
                     DLLEFGDIFNGSHEIQRKVDELMAGAMDELKRIDEMGGAVAAVESSYMKQKLVESNAR
                     RIAGIESGEQIVVGVNKWTETEPSPLTTGDGSILTVDHRAEAEQIERLKAFRDGRDQK
                     AVDKALTDLKAAAQEGRNVMEPSIAAAHAGVTTGEWAQTLREVFGEYRAPTGVARAAA
                     QSKGEKIAEVRQRVDAVS"
     gene            1821..3107
                     /gene="ccrA"
                     /locus_tag="VLL76_10130"
     CDS             1821..3107
                     /gene="ccrA"
                     /locus_tag="VLL76_10130"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HSV29909.1"
                     /translation="MSDAAKMAEIRPGQVVKDLYEIGEIPPLGHVPKQMYAWCIRKER
                     HGNPDTAMLVEVVDTPEIDPHEVLIMVMAAGVNYNGVWAALGKPISPFDYHKAPYHIA
                     GSDASGVVWAVGSKVKRWKVGDEVVVHCNQTDGDDEECNGGDPMNSPTQRIWGYETPD
                     GSFAQFTRVQAQQLMHRPKHLSWEESACYTLTLATAYRMLFGHRPHVLRPGHNVLVWG
                     AAGGLGSMAIQLIAVSGANAIGVISEEDKRDFVLGLGAKGVINRKDFDCWGQLPDVDG
                     DQDVFKDYMKKVREFGKAIWDITGKGNDVDFVFEHPGEATFPVSCNVVKRGGMVVFCA
                     GTTGFNLTFDARFVWMRQKRIQGSHFANLLQASQANQLVIERRIDPCMSECYAWDEIP
                     AAHMKMLRNQHKPGNMAVLVQALKPGRHTIEDCIEG"
BASE COUNT          543 a         1005 c         1044 g          546 t
ORIGIN      
        1 gacaccgcat cgacccgctg gcgcacctcg gcgatcttct cgcccttgga ctgggcggcg
       61 gcgcgcgcca cgccggtggg ggcgcggtat tccccgaaca cctcgcgcag ggtctgggcc
      121 cattcgccgg tggtgacgcc ggcatgggcg gcggcgatgg acggctccat cacgttgcgg
      181 ccttcctggg cggccgcctt gaggtcggta agcgccttgt ccaccgcctt ctggtcgcgg
      241 ccgtcgcgga acgccttcag gcgctcgatc tgctcggcct cggcacgatg gtccacggtc
      301 aggatcgagc cgtcgccggt ggtgagcgga gacggctcgg tctcggtcca cttgttgacg
      361 ccgaccacga tctgctcgcc cgattcgatg ccggcgatgc ggcgcgcgtt ggattccacc
      421 agcttctgct tcatgtagct ggattccacc gccgccacgg cgccgcccat ctcgtcgatg
      481 cgcttgagtt cgtccatggc gccggccatc agctcgtcca ccttgcgctg gatttcgtgc
      541 gagccgttga agatgtcgcc gaattccagc aggtcggtct cataggcgac gatctgctgc
      601 aggcgcagcg accattgctg gtcccacggg cgcggcaggc ccagcgcctc gttccaggcc
      661 ggcaattgga cggcgcgggc gcgggcgtcc ttggacagca ccaccgccag catttccagc
      721 aggatgcgat agacgttgtt ctcgggctgc ggctcggtca ggcccaggct gttgacctgc
      781 acgccatagc ggaagcggcg cgccttttcg tcggtgatgc catagcgttc gcggcagatc
      841 tggtcccaca gataggtgaa ggaccgcatc ttgcacaatt cggtgacgaa gcggatgccg
      901 gcgttgacga agaacgagat gcggctgacc accaccggga agtcctcggc cggcacggtc
      961 gggcgcacgg tgtcgagcac cgcgatggcg gtggccaggg cataggccag ttcctgctcg
     1021 ggcgtcgcgc cggcttcctg caggtggtac gagcacacgt tcatggggtt ccacttggga
     1081 acctcgcgat aggtgaaggc gatgacgtcg ctggtcagct tcaaggacgg ctgcggcgca
     1141 aagatatagg tgccgcgcga caggtattcc ttgatgatgt cgttctgggt ggtgccgttg
     1201 aggctggcac gcgccgcgcc ctgcttctcg gcggtggcga tgtagagcga cagcagccac
     1261 ggcgccggag cgttgatggt catcgacgtg ttcatctttt caagaggaat tccctcgaaa
     1321 agggtctgca tgtcgccgat gtggcagacc gggacgccga ccttgccgac ctcgccgcgc
     1381 gccagcgcgt gatccgagtc gtagccggtc tgggtcggca ggtcgaaggc gatggacagg
     1441 ccggtctggc ccttggtgag gttggtgcgg aacagcttgt tggattcggc ggccgaggaa
     1501 tggcccgaat aggtgcggaa cagccagggc ttctcgcggg taggggcctt ggcctcgggc
     1561 gtgcttcctt gcgtcattcc gtaatcaccc tcacatcttg cgttgcagca tcatccttcc
     1621 gcggccggaa ggccttacga cgtaaaattt ctcgacatca ttgcctgacg aaacaaacta
     1681 tcattttgtg cattgcgaag aaagacgcaa aacgctaaaa cccgagaaga aggtgacccc
     1741 ggaaagcgac cgcctcgccc aaccgggtag aacgccccac cccggtggga ttggcccccg
     1801 aattgaagga gtttgctggc atgagcgacg cggcgaagat ggcggagatc cggcccggcc
     1861 aggtggttaa ggacctctac gagatcggtg agatcccgcc gctcggccac gtgccgaagc
     1921 agatgtacgc ctggtgcatc cgcaaggagc gtcacggcaa ccccgacacc gccatgctgg
     1981 tcgaggtggt cgacaccccc gagatcgatc cgcacgaggt gctgatcatg gtgatggccg
     2041 ccggcgtcaa ctacaacggc gtgtgggccg cgctcggcaa gcccatcagc ccgttcgact
     2101 accacaaggc gccgtaccac atcgccggtt cggatgcctc gggcgtcgtg tgggcggtgg
     2161 gctcgaaggt gaagcgctgg aaggtcggcg acgaggtcgt ggtccactgc aaccagaccg
     2221 acggcgacga cgaggagtgc aacggcggcg acccgatgaa ctcgccgacc cagcgcatct
     2281 ggggctacga gacccccgat ggttcgttcg cgcagttcac ccgcgtccag gcgcagcagc
     2341 tgatgcaccg tcccaagcac ctgagctggg aagagagcgc ctgctacacc ctgaccctgg
     2401 cgaccgccta tcgcatgctg ttcggccacc gtccgcacgt gctgcgtccc ggccataacg
     2461 tgctggtgtg gggcgccgcc ggcggcctgg gctccatggc catccagttg atcgccgtgt
     2521 cgggcgccaa tgccatcggc gtgatctcgg aagaagacaa gcgcgacttc gtcctcggcc
     2581 tgggcgccaa gggcgtcatc aaccgcaagg acttcgattg ctggggccag ttgcccgacg
     2641 tggacggcga ccaggacgtc ttcaaggact acatgaagaa ggtccgcgag ttcggcaagg
     2701 ccatctggga catcaccggc aagggcaacg acgtcgactt cgtgttcgag catcccggcg
     2761 aggccacctt cccggtgtcg tgcaacgtgg tcaagcgcgg cggcatggtc gtgttctgcg
     2821 ccggcaccac cggcttcaac ctgaccttcg acgcccgctt cgtgtggatg cgccagaagc
     2881 gcatccaggg cagccacttc gccaacctgc tgcaggccag ccaggccaac cagctggtga
     2941 tcgagcgtcg catcgacccg tgcatgtcgg aatgctacgc ctgggacgag atcccggcgg
     3001 cgcacatgaa gatgctgcgc aaccagcaca agcccggcaa catggcggtc ctggtccagg
     3061 ccctgaagcc cggccgccac accatcgagg actgcatcga aggctgagaa cgccttaccg
     3121 tgatggcccg ccggcaac
//
LOCUS       DATIKR010000640         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_203052, whole genome shotgun sequence.
ACCESSION   DATIKR010000640 DATIKR010000000
VERSION     DATIKR010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203052"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VLL76_10135"
     CDS             <1..329
                     /locus_tag="VLL76_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29910.1"
                     /translation="HMVEQNPINGDVKHFLDSIWRRFGQYSTDQLTKRVAEHSPVAEA
                     MAKGPGEEIAFDVMVKFYSSEAAARKGAPSVDNVVRPRVLRSQTGKPVSVTSWRPKAV
                     PVKKDG"
     gene            477..>1542
                     /locus_tag="VLL76_10140"
     CDS             477..>1542
                     /locus_tag="VLL76_10140"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSV29911.1"
                     /translation="MVDRDRTLVRGTAQIEATVRLIADHSARAIEASDALLRRMADMA
                     EDWDLRDPGEGLRIWSRLVEHIDNSAPVGSAWIVDADGNLVLENWGFPPSRPGNFAHR
                     DYFTAHLVPGAGLFVGDGQIGTATGKQRFTISRAARNPDGSLRAVVVAGVFADQMAGV
                     LDQTAFGPKVVAGLLRGDGKVMVLRPGSDPALLARLSGQSGQVVVDGTDYVVVTRKVA
                     GYSATVVVGVPLAAVLGQWRSRAMLTTGIAIVASVCFGLLIVAGLASARREAAAMTAL
                     EEQKRTLEQRVAERTGDLARALEAARTAGQAKDLFLATVSHDLRQPLQAMSLLAGVVS
                     ATASDDRARRLADQVAASLTY"
BASE COUNT          234 a          507 c          562 g          239 t
ORIGIN      
        1 cgcacatggt cgagcagaat cccatcaacg gcgacgtgaa gcatttcctc gacagcatct
       61 ggcgccgctt cgggcagtac agcaccgacc agctgaccaa gcgggtggcc gagcattctc
      121 cggtcgccga ggccatggcc aagggtccgg gcgaggagat cgccttcgac gtgatggtga
      181 agttctattc cagcgaggcg gccgcccgca aaggcgcgcc gtcggtggac aacgtggtgc
      241 ggccgcgcgt cctgcgctcg cagaccggca agccggtcag cgtcacgagc tggcggccca
      301 aggcggtgcc ggtcaagaag gacggctgac agacttgcgc cataggccac taggccgttt
      361 atccagtggg caaatgtcac aggacccggc attcctgggg gatgcaacgc aaggtcctat
      421 gggcggctct gctgcttttc gtcgtggtct gcaacggaac cttgggatgg tccgtgatgg
      481 tggaccgcga ccgcacgctg gtgcgcggca ccgcccagat cgaagcgacc gtccgcctga
      541 tcgccgacca ttccgcccgc gccatcgagg ccagcgacgc cctgctgcgg cgcatggccg
      601 acatggccga ggattgggat ttgcgcgacc cgggcgaggg cctgcgcatc tggtcgcggc
      661 tggtcgagca catcgacaac agcgcgccgg tcggatcggc ctggatcgtc gatgccgacg
      721 gcaaccttgt actggagaat tgggggttcc ctccgtcacg ccccggcaac ttcgcccacc
      781 gcgactattt cacggcccat ctggtcccag gggccggcct gttcgtcggc gacggccaga
      841 tcggcaccgc caccggcaag cagcgcttca ccatcagccg ggcggcgcgc aacccggacg
      901 gatcgttgcg ggcggtggtg gtggccggcg tgttcgccga ccagatggcc ggcgtgctcg
      961 accagaccgc gttcggcccc aaggtcgtgg ccggattgct gcgcggcgac ggcaaggtga
     1021 tggtgctgcg cccgggaagc gatccggcgc tgctcgcgcg gttgagcgga caatccgggc
     1081 aagtggtggt ggacggaacc gactacgtgg tggtgacgcg caaggtcgcg ggctattcgg
     1141 ccacggttgt ggtgggggtg ccgctggcgg ccgtgctggg gcaatggcgg tcccgcgcca
     1201 tgctgaccac cggcatcgca atcgtcgcca gtgtctgctt cggcctgctg atcgtcgccg
     1261 gcctggcctc ggcacggcgc gaggcggcgg cgatgacggc gctggaggag cagaagcgga
     1321 ccctggagca gcgtgtggcc gaacgcaccg gcgacctggc acgggcgctg gaggcggcgc
     1381 gcaccgccgg ccaggccaag gatttgttcc tcgccaccgt cagccacgat ctccgccagc
     1441 cgctccaggc gatgtcgctg ctggcggggg tggtgtcggc gaccgcctcc gacgaccgtg
     1501 cccgccggct ggccgaccag gtggcggcgt cgctgactta tg
//
LOCUS       DATIKR010000641         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_106612, whole genome shotgun sequence.
ACCESSION   DATIKR010000641 DATIKR010000000
VERSION     DATIKR010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106612"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VLL76_10145"
     CDS             <1..240
                     /locus_tag="VLL76_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV29912.1"
                     /translation="TQAEKGLNNLALARLAGVYPSMITRMHKVGRIRVDNLAKIAAVL
                     GLDLASLVIESPAAVDSAASAALRSNSSSPQEAAA"
     gene            708..962
                     /locus_tag="VLL76_10150"
     CDS             708..962
                     /locus_tag="VLL76_10150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29913.1"
                     /translation="MVKALNMRAAEVADALGVCETASSRKIEAAEELLETILRAPTKW
                     SRRPDLARSAVAARLRTLTAIVATHPEALEPWLEAVQGGK"
     gene            1111..1533
                     /locus_tag="VLL76_10155"
     CDS             1111..1533
                     /locus_tag="VLL76_10155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29914.1"
                     /translation="MTPRQQAEQFFGTAVAESPRPLPPPKQQGVRTAEINQRRASQEH
                     INRRGYSAWVVYPPAERIAVNGCSRHCGGTAVGGCLRFTRNGGACPGLVPTFSDLVPP
                     VCHSIYDEHPLVVRDEQVRDGYSDRERDLAAAMAEDVI"
     gene            1530..>1807
                     /locus_tag="VLL76_10160"
     CDS             1530..>1807
                     /locus_tag="VLL76_10160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29915.1"
                     /translation="MTHAAHCQPAPIEMPPPTKREYLSVSQAAAAAPIPCNGQTVVRW
                     IMHGVLAPSGGRGLRLRVFLHAKKCGGRWAIARADLHAFFEATTAVPAG"
BASE COUNT          307 a          619 c          638 g          243 t
ORIGIN      
        1 acccaggcgg agaaggggct gaacaacctc gccctcgccc gcctggccgg ggtgtaccca
       61 tcgatgatca cgcggatgca caaggtcgga cgaattcgcg tggacaacct ggccaagatc
      121 gcggccgtcc tgggccttga cctggcgtcg ctggtcatcg aatcgccggc ggcggtcgac
      181 tctgcggcct ctgcggctct gcggtcaaat tcttccagcc cacaggaggc cgccgcatga
      241 attctcgatg ccagatctgc cagaaccgcg aagcggggct ctgcggcggg accgccgggc
      301 cggcgacgcc gtgcttcgag ccgcccgagg cggcgcgggg gcagttcgac cccgccagcg
      361 gcgaggaagt cgcccatcaa atcatagtcc ccggcaacct cggccgtggg ccgggcggcg
      421 gaagcgagca ccgccgtcaa caggccgggc aggcggtctc ccccttccgc cgcccggcga
      481 ttgtcaactc cccggcccca acggccggta gccattcctg cctgcgtcat agccaggcag
      541 catagacgga gcgaactgcg tggatggagc cgaaaccatt acggccttag cgcccgtgag
      601 cggagcgaaa ggcagcaggc ggcagacggc aggcagcaga aaatctttag cgcccgtacc
      661 ccatggggcg ctaaacctgc ccgcggccgg ctggccgggg gcgagcgatg gtcaaggcat
      721 tgaatatgcg ggcggccgag gtcgccgacg ccctgggcgt ctgcgagacg gccagcagcc
      781 gcaaaatcga ggcggccgag gaactgctgg aaaccatttt gcgcgcgcca acaaaatggt
      841 cgcggcggcc ggacctggcc cgctcggccg ttgcggcccg gctgcgaacg ctgacggcga
      901 tcgtggcgac gcaccccgag gccctggagc cgtggctgga ggcggtacag ggagggaaat
      961 agcggagaag acggataccg gataccgggg accggagacc gtcggaaccg ggactccggt
     1021 atccggtatc cggtatccgt ccctgacggt cctcttgcgg actccggtat ccggtatccg
     1081 gtatccgtcc ctgatgatcg ggggtgccgc atgacgcccc gccagcaagc cgagcaattc
     1141 ttcggcacgg ccgtggccga gtcgcccagg ccgctgccgc cgcccaagca gcagggggtc
     1201 cgcacggcgg aaatcaatca gcggcgggcg agccaggagc atatcaaccg ccgcgggtac
     1261 agcgcctggg tggtctaccc gccggcggag cggatcgccg taaacggctg cagcaggcac
     1321 tgcggcggga ccgccgtcgg cggctgcctg cggttcacgc gcaacggcgg ggcatgcccc
     1381 ggcctggtcc ccacgttcag cgatctggtc ccgcccgtct gccacagcat ctacgacgag
     1441 catccgctgg tggttcgcga cgaacaggtc cgcgatggct acagcgaccg cgagcgggac
     1501 ctggccgccg cgatggcgga ggatgtgata tgacccacgc cgcccattgc cagcccgcgc
     1561 cgatcgagat gccgccgcca acgaaacgcg agtacctgtc ggtctcccag gcggcggccg
     1621 ccgcgccgat cccatgcaac ggccagacgg tggtccgctg gatcatgcac ggcgttctgg
     1681 ccccctcggg cggccggggg cttcggctgc gggtattcct ccacgccaaa aaatgcggcg
     1741 ggcgatgggc gatcgcacgg gcggacctgc acgcgttctt tgaggcgacg acggccgtac
     1801 cggcggg
//
LOCUS       DATIKR010000642         2512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_9905, whole genome shotgun sequence.
ACCESSION   DATIKR010000642 DATIKR010000000
VERSION     DATIKR010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9905"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..911
                     /locus_tag="VLL76_10165"
     CDS             189..911
                     /locus_tag="VLL76_10165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29916.1"
                     /translation="MSLARRLSIAGLIGLSLAACTTARPVPVGHETKTQQELHSLSHW
                     KVLAGNLADRVAARSTEEVRAGGVFVEPIDDQVEFTRVLHSELTGALTSRGTVVTMAR
                     GGSRARLVTSVEVVEHSHPWDVPPGAIALIGGVLWAAKELDAQAVTTGAWAERAGDAM
                     RVGLLDAAVSGLASARKRLAEVVVTTTLVDDSQIFARDSAVYYIAHDDIPIYKTNRPA
                     APLMVRGGTDNQPMPVRGFAIK"
     gene            923..1516
                     /locus_tag="VLL76_10170"
     CDS             923..1516
                     /locus_tag="VLL76_10170"
                     /inference="COORDINATES: protein motif:HMM:NF036774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlgO family outer membrane protein"
                     /protein_id="HSV29917.1"
                     /translation="MTRHSALALVLAVPLLLGGCISDPTAPKANVTPSQSLIAHSYGA
                     TDRLLAEMKSGIDPAQPILVTTLADNDDLTASSSFGRLVSEQMASRLVASGLTVHEVK
                     LANRLMVREGTGQLILSRDVTQLGKSSGAQAVIAGTYTVADDVVFVNTKFMRATDGKV
                     LAAYDYTLALDANLRKLIGSVETERLYVAPKARASND"
     gene            complement(1417..2154)
                     /locus_tag="VLL76_10175"
     CDS             complement(1417..2154)
                     /locus_tag="VLL76_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 domain-containing protein"
                     /protein_id="HSV29918.1"
                     /translation="MITPAARAFLAELGANNEKAWFEPRKDEYRRLLLEPLRDLVAAL
                     APVMQAIDPGFDCDPKGGAISRIRRDTRFSRDKSPYRVNQWIAFKVKGDGWQDRPAFF
                     MEFGPEGWRYGLGFYAASPATMKAVRGRILARPSTFADAHRQATEAGFVLEGEPYKRP
                     KLPEDAPVAEWWALKTAYYVANRRPDDVLEHALAAHLADKFTALAPMYDSWPDQSFEA
                     RAFGATYSRSVSTEPISLRRLASSAKV"
     gene            complement(2151..>2512)
                     /locus_tag="VLL76_10180"
     CDS             complement(2151..>2512)
                     /locus_tag="VLL76_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HSV29919.1"
                     /translation="WEKELAYGDMQRLGFARLLLHRPDWIFIEEATDAIDPDGEREMM
                     RLLRDDFPGSTVITVGNHPALEDFHDRKLVLSRSNDGMVLVNEARLLRKANSERPHWL
                     GRFLTPLVKRKIKNPVP"
BASE COUNT          380 a          871 c          871 g          390 t
ORIGIN      
        1 caggatgaca gcgggattgt catgctgagc gtcagcgaag catctttcag gcacgggcgg
       61 cggccatccg gcgttgcggg cggccgtcat cccggccgcc cgtgacaact gccccgcccc
      121 gcttaacagc gcccggccgg cgtgttatcg ttcggcaggg atgcaggtat tccattcggg
      181 ggttcatcat gtcgttggcg cgccgtcttt ccatcgcggg gctgatcggc ctgtcgcttg
      241 ccgcctgcac cactgcgcgg ccggtgccgg tcgggcatga gaccaagacg cagcaggagc
      301 tgcattcgct gtcgcactgg aaggtgctgg ccggcaacct ggccgaccgc gtcgccgccc
      361 gcagcacgga agaggttcgg gccggcggcg tgttcgtcga gcccatcgac gaccaggtcg
      421 agttcacccg cgtgctgcat tccgagttga ccggcgccct gacgtcgcgc ggcacggtgg
      481 tgaccatggc gcgcggcggt tcgcgcgccc gcctggtgac ctcggtcgag gtggtcgagc
      541 acagccatcc gtgggacgtg ccgcccggcg ccatcgccct gatcggcggc gtgctgtggg
      601 ccgccaagga actggacgcc caggccgtca ccaccggcgc ctgggccgag cgcgccggcg
      661 atgccatgag ggtcgggctg ctcgacgccg ccgtgtctgg cctcgccagc gcccgcaagc
      721 gcctggccga ggtggtggtg accaccaccc tggtggacga cagccagatc ttcgcgcgcg
      781 acagcgccgt ctattacatc gcccacgacg acatcccgat ctacaagacc aaccgcccgg
      841 cggcgccctt gatggtgcgc ggcggcaccg acaaccagcc gatgcccgtg cgcggcttcg
      901 ccatcaagta ggagaccgcg cgatgacccg gcattccgcc ctcgccctcg tcctggccgt
      961 cccgctgctg ctgggcggct gcatctccga cccgaccgcg cccaaggcca acgtcacgcc
     1021 gtcgcaatcg ctgatcgccc acagctacgg cgccaccgac cgcctgctgg cggaaatgaa
     1081 gtcgggcatc gacccggccc agccgatcct ggtcaccacc ctggccgaca acgacgacct
     1141 gacggcgtcg tcgtccttcg gccggctggt gtcggaacag atggcctcgc gcctggtggc
     1201 cagcggcctg accgtgcacg aggtcaagct ggccaaccgc ctgatggtgc gcgagggcac
     1261 cggccagttg atcctgtcgc gcgacgtcac ccagttgggc aagtccagcg gcgcccaggc
     1321 ggtgatcgcc ggcacctaca cggtggccga cgacgtggtg ttcgtgaaca ccaagttcat
     1381 gcgcgccacc gacggcaagg tcctggccgc ctatgactac accttggcgc tggacgccaa
     1441 cctgcgcaag ctgatcggct cggtcgagac cgagcggctg tacgtggcgc cgaaggcgcg
     1501 ggcctcgaac gactgatcag gccaggaatc gtacatcggc gccagcgccg tgaacttgtc
     1561 ggccagatgg gcggcaaggg cgtgttccag cacgtcgtcg gggcggcggt tggcgacgta
     1621 ataggcggtc ttcagcgccc accattccgc caccggcgcg tcctcgggca atttggggcg
     1681 cttgtagggc tcgccctcca gcacgaaacc ggcctcggtc gcctggcgat gggcatccgc
     1741 gaaggtggag ggccgtgcca ggatgcggcc acgcacggcc ttcatggtcg ccgggctggc
     1801 ggcatagaag cccaggccgt agcgccagcc ctcggggccg aattccatga agaaggcggg
     1861 gcggtcctgc cagccgtcgc ccttgacctt gaaggcgatc cactggttga cgcgataggg
     1921 cgacttgtcg cgcgagaacc gggtgtcgcg gcggatgcgc gagatggcgc cgcccttggg
     1981 atcgcagtcg aagccgggat cgatggcctg catgacgggc gccagcgccg ccaccaggtc
     2041 gcgcaacggt tccagcagca ggcggcgata ttcgtccttg cgcggctcga accacgcctt
     2101 ctcgttgttg gcgcccaact cggccaggaa ggcgcgcgcg gcgggggtga tcacggcacc
     2161 gggttcttga tcttgcgctt gaccagcggc gtgaggaagc gccccagcca gtgcggccgc
     2221 tcggaattgg ccttgcgcag caggcgagcc tcgttgacca gcaccatgcc gtcgttggag
     2281 cggctcagca ccagcttgcg gtcgtggaaa tcctccagcg ccgggtggtt gccgacggtg
     2341 atgacggtgg agccggggaa gtcgtcgcgc agcagccgca tcatctcgcg ctcgccatcg
     2401 gggtcgatgg cgtcggtggc ctcctcgatg aagatccagt ccggccggtg cagcagcagc
     2461 cgcgcgaagc ccaggcgctg catgtcgcca taggccagct ccttctccca cg
//
LOCUS       DATIKR010000643         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_190811, whole genome shotgun sequence.
ACCESSION   DATIKR010000643 DATIKR010000000
VERSION     DATIKR010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190811"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VLL76_10185"
     CDS             <1..796
                     /locus_tag="VLL76_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV29920.1"
                     /translation="GLALIFGLLNIINFTHGAQYMMGAFVAWLILTYGGMSYWVALVV
                     APLVVAALGIVIERTMLSRLYKLDHLYGLLLTFGLALIIEGAFRQLYGISGMPYAVPA
                     ELAGGWKLGFMYLPIYRGWVVVASLVLCLGTWYAIEKTKLGAYLRAGTENPTLVQAFG
                     VNVPLMVTATYGFGVALAAIAGVMAAPIYSVNPLMGSNLIIVVFAVVVIGGMGSILGS
                     VITGFMLGLLEGLTKVFYPEAASTVIFVVMAIVLLIKPAGLFGKAA"
     gene            798..1769
                     /locus_tag="VLL76_10190"
     CDS             798..1769
                     /locus_tag="VLL76_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007006881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV29921.1"
                     /translation="MAKTLDLPMNRQGFASRQTIFVGALLAFAIAAPFGIYPVFLMKA
                     LCFALFASAFNLLLGYVGLLSFGHAVFFGWSAYVTAHAAREWGWNPEFAILLGMALAT
                     VLGAAVGWLAIRRQGIYFAMITLALAQLMFFLAVQAPFTHGEDGIQGVPRGKLFGLVD
                     LSLTMNMYWFVLAVFVLALLALYRVVHSPFGQVLKAIRDNEPRAVSLGYHVDRYKLIA
                     FVISAALSGLAGSLKSLVFQLASLADVHWHASGEVVLMTLLGGVGTIFGPTVGAFVVV
                     TIQNYFSEVGSWVTIIQGLIFVICVLAFRHGIVGVFAPWFKKRGISV"
BASE COUNT          241 a          623 c          635 g          418 t
ORIGIN      
        1 tggcctggcg ctgatcttcg gcctgctgaa catcatcaac ttcacccatg gcgcccagta
       61 catgatgggc gccttcgtcg cgtggctgat cctgacctat ggcggcatga gctattgggt
      121 ggcgctggtg gtggctcccc tcgtcgtcgc cgcgctgggc atcgtcatcg agcgcaccat
      181 gctgtcgcgg ctctacaagc tcgaccatct ctacggcctt ttgctgacct ttggcttggc
      241 gctgatcatc gagggcgcgt tccgccagct ctacggcatc tcgggcatgc cctatgccgt
      301 tccggccgaa ctggcgggcg gctggaagct gggcttcatg tacctgccga tctatcgcgg
      361 ctgggtggtt gtggcgtcgc tggtgctgtg cctgggcacc tggtacgcca tcgagaagac
      421 caagctgggc gcctatttgc gtgccggcac cgagaacccc accctggtcc aggcgttcgg
      481 cgtcaacgtg ccgctgatgg tcaccgccac ctacggcttc ggcgtcgccc tggcggccat
      541 cgccggcgtg atggcggcgc ccatctattc cgtcaatccg ctgatgggat cgaacctgat
      601 catcgtggtg ttcgccgtgg tggtgatcgg cggcatgggc tcgatcctgg gctcggtgat
      661 caccggcttc atgctgggcc tgctggaggg cctgaccaag gtgttctatc ccgaggcggc
      721 cagcaccgtg atcttcgtcg tcatggccat cgtcctgctg atcaagccgg ccggcctgtt
      781 cggaaaggct gcctgacatg gcgaaaaccc tcgacctccc catgaaccgg cagggcttcg
      841 cctcgcgcca gaccatcttc gtgggcgcgc tgctggcctt cgccatcgcg gcgccgttcg
      901 gcatctatcc cgtcttcctg atgaaggcgc tgtgcttcgc gctgttcgcc tcggccttca
      961 acctgctgct gggctatgtc ggcctgctgt cgttcggcca cgcggtgttc ttcggctggt
     1021 cggcctatgt caccgcccat gcggcgcgcg aatggggctg gaacccggaa ttcgccatcc
     1081 tgctgggcat ggcgctggcg accgtgctgg gggcggcggt gggctggctg gcgatccgcc
     1141 gccagggcat ctatttcgcc atgatcactc tggcgctggc gcagttgatg ttcttcctgg
     1201 cggtgcaggc gccgttcacc catggcgagg acggcatcca gggcgtgccg cgcggcaagc
     1261 tgttcgggct ggtcgacctg tccttgacca tgaacatgta ctggttcgtg ctggcggtgt
     1321 tcgtgctggc gctgctggcg ctgtaccgcg tcgtccattc gccgttcggc caggtgctga
     1381 aggccattcg cgacaacgag ccgcgcgcgg tgtcgctggg ctaccacgtc gaccgctaca
     1441 agctgatcgc cttcgtcatc tcggcggcgc tgtcggggct ggccggctcg ctgaaaagcc
     1501 tggtgttcca gttggcctca ctggcggacg tgcattggca cgcctcgggc gaggtggtgc
     1561 tgatgaccct gctgggcggc gtcggaacca tcttcggccc gaccgtgggg gcgttcgtgg
     1621 tggtgaccat tcagaactac ttctcggaag tcggttcctg ggtcaccatc atccagggct
     1681 tgatcttcgt gatctgcgtg ctggccttcc gtcacggcat cgtcggcgtg ttcgccccgt
     1741 ggttcaagaa gcgcggcatc tcggtttagg agggggagcc atggcgttca aggacatcct
     1801 ggtccatctc gacggcggcg accgcgaccc gttgcgcatc aaggccacac tggacctggc
     1861 ccggcgttcc ggcgcccgcg tcaccggcct gttcgcccgc gccgagcatt tcggccc
//
LOCUS       DATIKR010000644         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_106642, whole genome shotgun sequence.
ACCESSION   DATIKR010000644 DATIKR010000000
VERSION     DATIKR010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106642"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..563
                     /locus_tag="VLL76_10195"
     CDS             117..563
                     /locus_tag="VLL76_10195"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV29922.1"
                     /translation="MRPLAASEIAAVAAQLAAMDPWLTLGFGAEALARYLGRDDPALR
                     RMVLERDGLPAGLLALRAPWLRGPYVELLAVLPGHQGGGLGRAMVEWAAAQAAGAHNL
                     WACVSSFNVAARDFYRKAGFTEVSPLPDLVADGFDEILLRRRLAAQ"
     gene            complement(557..901)
                     /locus_tag="VLL76_10200"
     CDS             complement(557..901)
                     /locus_tag="VLL76_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV29923.1"
                     /translation="MKSSSNDRRFDDRHPGTGLVANIGDEQVEVLDVSIGGMKVPVPK
                     GVKTYRGDMVEFVVQSTHWPDMKSVAGKGVVRAMAQGWMALQFERPSYDLMKLVSRHV
                     AGLVWGDKPYGY"
     gene            complement(975..>1833)
                     /locus_tag="VLL76_10205"
     CDS             complement(975..>1833)
                     /locus_tag="VLL76_10205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="haloacid dehalogenase"
                     /protein_id="HSV29924.1"
                     /translation="PDMRLRLDDIAVFRANWDNKADNIRTIAETLDIGLDSMVFVDDN
                     PAERALVRRELPMVTVVELPEDPSHYVRAVHGARLFETLTFSAEDRKRADYYRANASR
                     QEERKRFTDLAEYQRSLEMQATARAIDDFSLPRAAQLINKSNQFHLTGTRYSEGDIRV
                     MLERPDWCGRVFTLKDRFGDNGLISVVLLHVAEGVGTIDTWVMSCRVLGRGMEEFIVN
                     DLVAQARALGCHSLAARYVPSKKNKLVAGLYARMGFAAAAADAADGTTFWRLDLAQAT
                     PLTTQIAAA"
BASE COUNT          266 a          615 c          635 g          317 t
ORIGIN      
        1 ctgatcttcc acatcaacgg ccgcgccccc gccaccggcc gggcgctgcc cgacatggtc
       61 gcggagttgc ggcgcaaggg cttccgcttc gcccgcctcg acgagatggt gaaataatgc
      121 gtccgctggc cgcttccgag atcgccgccg tcgccgccca actggcggcc atggacccgt
      181 ggctgacgct gggcttcggc gccgaggcgc tggcccgcta tctcggccgc gacgacccgg
      241 ctttgcgccg catggtgctg gaacgcgacg gcctgcccgc cgggctgctg gcgctgcgcg
      301 cgccgtggct gcgcggcccc tatgtggaat tgctggcggt gctgcccggc catcagggcg
      361 gcggattggg ccgcgccatg gtggaatggg cggcggccca ggcggcgggc gcccacaatc
      421 tgtgggcctg cgtatcaagc ttcaacgtcg cggccaggga cttctatcgc aaggccggct
      481 tcaccgaggt ctcgccgctg cccgacctgg tggccgacgg tttcgacgag atcctgttgc
      541 gccggcgcct ggcggctcag tagccgtagg gcttgtcgcc ccacaccagc ccggcgacgt
      601 ggcggctgac cagcttcatc aggtcatagg acgggcgctc gaactgcagc gccatccagc
      661 cctgcgccat ggcgcgcacc acgcccttgc cggccaccga cttcatgtcg ggccaatggg
      721 tggactggac cacgaattcg accatgtcgc cgcgataggt cttcacgccc ttgggcaccg
      781 gcaccttcat gccgccgatg gacacatcca gcacctcgac ctgttcgtcg ccgatattgg
      841 cgaccaggcc ggtgccggga tggcggtcgt cgaagcgacg gtcgttgctg ctgctcttca
      901 tcgcggtccc accacgtcca ctatcccttt ggcattacca cagggcgtcg gccgggggaa
      961 ggggatgcgc gggatcatgc ggcagcgatc tgggtggtga gcggcgtggc ctgggccagg
     1021 tcgagccgcc agaacgtcgt tccatccgcc gcgtcggcag cggcggcggc gaaccccatg
     1081 cgggcgtaaa ggccggcgac cagcttgttc ttcttcgacg gaacgtagcg ggccgccaag
     1141 ctgtggcacc ccagcgcgcg cgcctgtgcc accaggtcgt tgacgatgaa ttcctccatg
     1201 ccgcggccga gcacccggca cgacatgacc caggtgtcga tggtgccgac gccctcggcg
     1261 acgtgcagca gcaccaccga tatcaagccg ttgtcgccga accgatcctt gagcgtgaac
     1321 acccggccgc accaatcggg gcgttccagc atcacccgga tgtcgccttc gctgtagcgc
     1381 gttccggtca ggtggaactg gttgctcttg ttgatgagct gggcggcgcg cggtagcgag
     1441 aaatcgtcga tggcgcgggc ggtggcctgc atctcgaggc tgcgctgata ctcggccagg
     1501 tcggtgaagc gcttgcgttc ttcctggcgt gacgcgttgg cgcgataata atcggcgcgc
     1561 ttgcggtcct cggccgagaa ggtcagcgtt tcgaacaggc gggcgccgtg cacggcgcgg
     1621 acgtaatggc tggggtcttc cggcagctcg accaccgtca ccatgggcag ctcgcgccgg
     1681 accaacgccc gttcggcagg gttgtcgtcg acgaagacca tggaatcgag gccgatgtcg
     1741 agggtctcgg cgatggtgcg gatgttgtcg gccttgttgt cccaattggc gcggaagacg
     1801 gcgatgtcgt ccagccgcag ccgcatgtcg gga
//
LOCUS       DATIKR010000645         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_46643, whole genome shotgun sequence.
ACCESSION   DATIKR010000645 DATIKR010000000
VERSION     DATIKR010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46643"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VLL76_10210"
     CDS             <1..183
                     /locus_tag="VLL76_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29925.1"
                     /translation="PNKPAVNKGGNWRKLVDDSKEERRAKEAAAKEAALAAAKAAAEA
                     EKPAEAKPDEETKASA"
     gene            180..1256
                     /locus_tag="VLL76_10215"
     CDS             180..1256
                     /locus_tag="VLL76_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit D"
                     /protein_id="HSV29926.1"
                     /translation="MTVLIDKSGPYAHAATSVQRTMTLVLAALAPATLFNVWLFGWPA
                     LNLFLVTLAAALATEALCLRLANRPLNPTLWDGSAVLTGWLLAMSLPPWAPWWIGAVG
                     GFVAIALGKHVFGGIGQNLFNPAMVARVALLISFPVPMTAFTAPAPIGSADAIGFAQG
                     LAITFGGTPIPDAVSAASALGLVKTELSRGVPVSESMAHAPQMIDLALGMVPGSFGET
                     SALLILLGGLFLIAKRIITWHIPVAMMATVFGLGWLFHAIDPARYADGIFHLLSGATL
                     LGAFFIATDYVTSPVSKQGQLVFGIGIGLLTWVIRTYAGYPEGVAFAVLLMNSLSPLI
                     DRGFRPRVFGRTRKGEPLPAKGGK"
     gene            1253..1855
                     /gene="rsxG"
                     /locus_tag="VLL76_10220"
     CDS             1253..1855
                     /gene="rsxG"
                     /locus_tag="VLL76_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009204978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HSV29927.1"
                     /translation="MITRDTLIHAVVLGGFSMAAAALLASSNLFTADEIKARAVEDLQ
                     ASLTQVIPASIHDNSPVADAIQMKAPGGKDMTVYRAIKGGKVTGVAFESSGNGYAGEI
                     RVIMGVDADGKILGVRVVKHNETPGLGDKIEVAKNDWITKFNGLFLGDPPVAQWAVKK
                     DGGRFDQFAGATITPRGTVNAIRDGLKYFAANKAQMLEVR"
     gene            1855..2532
                     /locus_tag="VLL76_10225"
     CDS             1855..2532
                     /locus_tag="VLL76_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018295160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HSV29928.1"
                     /translation="MAQYRTLVRQGIWDNNVVFGQMLSLCPTLAVTSSATNGLGMGMA
                     TLAVVTMSNILVSALKRFITPEVRIPAFVLIIATLVTIVDMAMNAWVHELYKVLGLFI
                     PLIVVNCLILGRAESFAAKNSVVASAVDGIAMGIGFTLALVVLGGVREVLGTGTLFAN
                     ASGLLGPAFTFLELKLVPADYPGVLVAILPPGGFIGLGLLIAGKRLIDRRAAKAAATG
                     AACHAAE"
     gene            2538..>2656
                     /locus_tag="VLL76_10230"
     CDS             2538..>2656
                     /locus_tag="VLL76_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HSV29929.1"
                     /translation="MKVGIAYATPAKQAWLTIEVPDGATVQQAIDKSGILKQFP"
BASE COUNT          411 a          951 c          868 g          426 t
ORIGIN      
        1 cccaacaagc cggccgtcaa caaaggcggc aactggcgca agctcgtcga tgactcgaaa
       61 gaggagcgcc gtgccaaaga ggccgcagcc aaagaagcag cactcgccgc cgccaaggcc
      121 gccgccgagg ccgagaaacc cgccgaggcc aagcccgacg aagagacgaa ggccagcgca
      181 tgaccgtcct gatcgacaag agcgggcctt acgcccacgc cgccaccagc gtgcagcgga
      241 ccatgacgct ggtgctggcg gccctggcgc ccgccaccct gttcaatgtc tggctgttcg
      301 gctggccggc gctgaacctg ttcctggtca ccctggctgc cgccctggcg accgaggcgc
      361 tgtgcctgcg cctggccaac cggccgctga acccgaccct gtgggacggc tcggcggtgc
      421 tgaccggctg gctgttggcc atgagcctgc cgccatgggc gccgtggtgg atcggcgcgg
      481 tcggcggctt cgtcgccatc gcgctgggca agcacgtgtt cggcggcatc ggccagaacc
      541 tgttcaatcc cgccatggtc gcgcgcgtcg cgctgctgat ctcgttcccg gtgccgatga
      601 cggcgttcac cgcgccggcc cccatcggct cggccgacgc catcggcttc gcccagggcc
      661 tcgccatcac cttcggcggc acacccatcc ccgacgcggt gtccgccgcc tccgccctgg
      721 gcctggtcaa gaccgaactc agccgcggcg tgccggtgag cgagagcatg gcgcacgcgc
      781 cgcagatgat cgacctggcg ctgggcatgg tgccggggtc gttcggcgag acctcggcgc
      841 tgctgatcct gcttggcggc cttttcctga tcgccaagcg catcatcacc tggcacatcc
      901 cggtggccat gatggcgacg gtgttcggcc tgggctggct gttccacgcc atcgacccgg
      961 cgcgctatgc cgacggcatc ttccacctgc tgtcgggcgc caccctgctg ggtgcgttct
     1021 tcatcgccac cgactacgtc acctcgccgg tgtccaagca gggccagttg gtgttcggca
     1081 tcggcatcgg cctgctgacc tgggtgattc gcacctatgc cggctatccc gagggcgtcg
     1141 ccttcgccgt gctgctgatg aacagcctgt cgccgctgat cgatcgcggc ttccgtccgc
     1201 gcgtcttcgg ccgcacccgc aagggcgagc cgctgccggc caaggggggc aaatgattac
     1261 ccgtgacacc ctgatccacg ccgtggtgct gggcggcttc tccatggccg ccgccgctct
     1321 gctggccagc agcaacctgt tcaccgccga cgagatcaag gcccgcgcgg tcgaggatct
     1381 gcaggcgtcg ctgacccagg tcatcccggc gtccatccac gacaacagcc cggtcgccga
     1441 cgccatccag atgaaggcgc cgggcggcaa ggacatgacc gtctatcgcg ccatcaaggg
     1501 cggcaaggtc accggcgtcg ccttcgagag ttcgggcaac ggctatgccg gcgagatccg
     1561 ggtcatcatg ggcgtcgacg ccgacggcaa gatcctgggc gtgcgcgtgg tcaagcacaa
     1621 cgagacgccc ggcctgggcg acaagatcga ggtcgccaag aacgactgga tcaccaagtt
     1681 caacggcttg ttcctgggcg acccgcccgt ggcgcaatgg gccgtcaaga aggacggcgg
     1741 ccgcttcgac cagttcgccg gcgccaccat cacgccgcgc ggtacggtca acgccatccg
     1801 cgacggcctg aagtacttcg ccgccaacaa ggcgcagatg ctggaggtcc gctgatggcc
     1861 caataccgca ccctcgtccg ccagggcatc tgggacaaca acgtggtgtt cgggcagatg
     1921 ctgtcgctgt gcccgacgct ggcggtcacg tcgtcggcca ccaacggcct gggcatgggc
     1981 atggcgaccc tggccgtggt caccatgtcc aacatcctgg tgtcggcgct gaagcgcttc
     2041 atcacgcccg aggttcgcat cccggccttc gtgctgatca tcgccaccct ggtgaccatc
     2101 gtcgacatgg ccatgaacgc ctgggtgcac gagctctaca aggtgctggg cctgttcatc
     2161 ccgctgatcg tggtgaactg cctgatcctg ggccgcgccg aaagcttcgc tgccaagaac
     2221 agcgtcgtcg cttcggcggt ggatggcatc gccatgggca tcggcttcac cctcgccctg
     2281 gtggtgctgg gcggcgtgcg cgaggtgctg ggcaccggca cgctgttcgc caacgcctcg
     2341 ggcctgctgg ggccggcctt caccttcctg gaactgaagc tggtgccggc cgactatccg
     2401 ggcgtgctgg tcgccatcct gccgccgggc ggcttcatcg gccttggcct gctgatcgcc
     2461 ggcaagcgcc tgatcgaccg ccgcgcggcc aaggccgccg ccaccggcgc cgcctgccac
     2521 gccgcggagt gagcgacatg aaagtcggaa tcgcctatgc cacccccgcc aagcaagcct
     2581 ggctgaccat cgaggtgccg gacggcgcca cggtgcagca ggccatcgac aagtcgggca
     2641 tcctgaagca attccc
//
LOCUS       DATIKR010000646         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_143134, whole genome shotgun sequence.
ACCESSION   DATIKR010000646 DATIKR010000000
VERSION     DATIKR010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143134"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="VLL76_10235"
     CDS             complement(<1..550)
                     /locus_tag="VLL76_10235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV29930.1"
                     /translation="MAENGGEMRPENDKADAFAGEVLEKVEALSLEVADISGTIDGLA
                     KFVKHQEELFANLKDIAHAMAEAIRRIDQAGRDTRDVTAQAGHQSSESLRTIEEALTD
                     INELVGSVQGIENRLEGLEGALGEVSSMSRNIQKIARQTNLLALNATIEAARAGEAGK
                     GFAVVANEIKTLAQQTNSATDDI"
     gene            complement(681..839)
                     /locus_tag="VLL76_10240"
     CDS             complement(681..839)
                     /locus_tag="VLL76_10240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29931.1"
                     /translation="MLEQNLAEFEALAVDLLEDAALMGCDVEQVRGVLRERIDGVEVR
                     YSTTRDVE"
     gene            complement(985..>1569)
                     /locus_tag="VLL76_10245"
     CDS             complement(985..>1569)
                     /locus_tag="VLL76_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSV29932.1"
                     /translation="WLDRLGQPGAEGLRADAARAKQAFNARFWNPRAGHLNDVVDGED
                     GGDDATLRPNQVFALSLTHPVLDQGHWVAVVDTIHSRLLTPLGLRSLPVDHPGYQPTF
                     RGDQRARDAAYHQGTVWGFLIGPFVDAWLRVYPDRRAEARAFLEGFLPHLGEFGLGSI
                     AEVFEAGPPHAPRGCVSQAWSVAEWLRAWAKVLG"
BASE COUNT          245 a          546 c          492 g          286 t
ORIGIN      
        1 tgatgtcgtc ggtggcgctg ttggtctgct gggccagggt tttgatctcg ttggcgacca
       61 cagcgaaccc cttgccggcc tcgccggcgc gggccgcctc gatggtggcg ttcaaggcca
      121 gcagattggt ctggcgggcg atcttctgga tgttgcgcga catcgagctg acctcgccca
      181 gcgcgccttc cagcccttcc agccggttct cgatgccctg gaccgaaccc accaattcgt
      241 tgatgtcggt cagcgcttcc tcgatggtgc gcagggattc cgacgattgg tggcccgcct
      301 gggcggtgac gtcgcgggtg tcgcggccgg cctggtcgat gcggcggatc gcctcggcca
      361 tggcgtgggc gatgtccttc aaattggcga acagctcttc ctgatgcttc acgaacttcg
      421 ccagtccgtc gatggtgccg gaaatgtcgg cgacctcgag gctcagtgcc tcgaccttct
      481 cgagcacttc ccccgcgaac gcatcggcct tgtcgttttc aggacgcatt tcgcccccgt
      541 tttcggccat cgccatatct cccggcgtca tttcttcttt ccccgaaggc ccgattcgtt
      601 gccgggtcct tccacctttg caatcaagta aaaccgtttc agcaatgccc cgtcaatctc
      661 tacagacaga taccaaaatt ctattccaca tcccttgtgg tggaatatct gacctcgacc
      721 ccatcgatgc gctcgcgcag cacgccccgc acctgttcga catcgcagcc catcaacgcc
      781 gcgtcttcca gcagatcgac cgccagggcc tcgaactcgg caaggttctg ttcaagcacc
      841 tttagcttct cgctgcacga gacaggctgc ccctcgggag tccgccagac ccggacacgg
      901 ttcatcggcc atcgatccca ctcgttgcgc acaacgccac tgtgcccgac cgacggcccc
      961 gctgtccacc gtcacatagg gtcgttaccc gaggaccttg gcccaggcgc gtagccattc
     1021 agccacactc cacgcctgcg acacgcagcc gcgcggcgcg tgcggcgggc cggcctcgaa
     1081 cacctcggcg atggacccca ggccgaactc gccgagatgg ggcaggaagc cttccaggaa
     1141 ggcgcgcgcc tcggcccggc ggtcgggata gacccgcagc caggcgtcga cgaacgggcc
     1201 gatcaggaag ccccataccg tgccctggtg ataggcggca tcgcgggcgc gctggtcgcc
     1261 gcggaaggtg ggctgatagc cgggatggtc gacgggcagc gagcgcagcc ccagcggcgt
     1321 cagcaggcgc gagtggatgg tgtcgaccac cgccacccaa tggccctggt cgagcaccgg
     1381 atgggtcagc gacagggcga agacctggtt cggccgcagg gtcgcgtcgt cgccgccatc
     1441 ctcgccatcc accacgtcgt tgagatggcc ggcccggggg ttccagaagc gggcgttgaa
     1501 cgcctgcttg gcgcgcgcgg cgtcggcgcg caggccttcg gcgcccggct ggccgaggcg
     1561 gtcgagcca
//
LOCUS       DATIKR010000647         5589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_46717, whole genome shotgun sequence.
ACCESSION   DATIKR010000647 DATIKR010000000
VERSION     DATIKR010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5589
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46717"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VLL76_10250"
     CDS             <1..629
                     /locus_tag="VLL76_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV29933.1"
                     /translation="PHKPAEPAPLLDFRPVLRDRPVLGYVLGYAAHMWELFALRSWMV
                     AFLAFAALSGGAGPAPTEAAMLASLVAMAGSIGGAALAVRFDRRSVCQAAALLSAVVA
                     AGIGFTGGWPYGLVVGLMVAYNGLVQLDSAALTTGAVLETDPARRGATIAVHSLTGFA
                     AAFVGPLAFGWVLDLAGGQSSVTGWGLAFLSVALVGVLGVPALRWSRP"
     gene            complement(618..1460)
                     /locus_tag="VLL76_10255"
     CDS             complement(618..1460)
                     /locus_tag="VLL76_10255"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV29934.1"
                     /translation="MDKRFFLFGLGFSGRVIARELVARGWRVAGTTRSGEAVDLPGVE
                     IFPFDRDHPLPAHALAGTTHLLSSVPPDAAGDPVLDVMGEALKALPIAWAGYLSTTGV
                     YGDCGGAWVDETAPTNPTLDRSRRRVMAERQWLASGLPVHLFRLAGIYGPGRSALDNA
                     RDGSGRRIVKPGQVFSRIHVEDIARTVLASMDRPNPGAAYNVCDDDPAPPQEVVAHAY
                     ALLGKMPPPEIPWDEAKATLSPMALSFYADNKRVRNDRMKTELGVALKYPSYREGLAA
                     ILGA"
     gene            1530..2312
                     /locus_tag="VLL76_10260"
     CDS             1530..2312
                     /locus_tag="VLL76_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29935.1"
                     /translation="MIRIASVSVLLAALALPAAAQTFDGPKAYEACLIIAKKSPEQGW
                     EEAIAWQSLGGGEAARHCAAVALIGLKKYGEAATRLETLANESKRDDATRAEMLAQAA
                     QAWLLEGNTMRADAAQRAALTLAPGHPEILMDHAVLLAGLNHFSEVVEVLSSVLRRQP
                     NRVEALVLRASAFRYLDNLPGAEDDVAKAISLDPEFADALLERGMLRRLKGEDAGARE
                     DWLKVIALQPEGVAADTARRNLEMLDVKDKDAEPTRLRDRRR"
     gene            2275..2691
                     /locus_tag="VLL76_10265"
     CDS             2275..2691
                     /locus_tag="VLL76_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29936.1"
                     /translation="MQNRPAYEIAAGSFVAAMLDGRRTLCLKAERLGKEHTNHFLVPL
                     DPVDDRARLALLYIDPNQELVQVDGVHLDFQDGPSETAPVVGDAFINDSGTMLKLLDD
                     PHSQRLHCYVDLTTGMVRARMERQIRRLLSWSVGRV"
     gene            complement(2693..3016)
                     /locus_tag="VLL76_10270"
     CDS             complement(2693..3016)
                     /locus_tag="VLL76_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005860908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HSV29937.1"
                     /translation="MIVTTTDAIEGAAIAQYLGIVSGDAVMGANIFRDLFASVRDVVG
                     GRAGSYESLLQQAKETALAEMTERARALGADAIVAVDLDYEVIGGDNKTMLMVSANGT
                     AVKLR"
     gene            complement(3031..3657)
                     /locus_tag="VLL76_10275"
     CDS             complement(3031..3657)
                     /locus_tag="VLL76_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015174601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV29938.1"
                     /translation="MSDSMTLVIGTKRYSSWSLRPWLALKKAGAEFDEVEIALRQPDT
                     KAEILKWSPSGKVPLLVHGDLRIWDSLAICEYVAETFPEAELWPAEREARAVARAISA
                     EMHAGFPNLRNTCAMDVCVRTPLAEIPTDVMVEVERIKAIWNECRHRFGADGPFLFGR
                     FSIADAMYAPVVTRFTTFAIKLDRVSKAYCDAVWDLPAMQEWKHNACA"
     gene            3797..5188
                     /locus_tag="VLL76_10280"
     CDS             3797..5188
                     /locus_tag="VLL76_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HSV29939.1"
                     /translation="MVEHLVDADAQSIELVALRKSGLTQWLAGQPEATRRWVEANGFA
                     AEAAALLPLPAADGGIARMLAGLGEDDDPWAFAALAAKLPAAHSYRLTEAMESKAASW
                     AALSWQLASYSFGRYKTRPARDWPRLEWPQGADRGWVERGATATRLVRDLINTPAADM
                     GPAELAGAAETLAANHGAGVRVIVGEGLLAENYPAIHTVGRAAAHHRQPRLIDLVWGD
                     DKAPRVTLVGKGVCFDSGGLDLKASSNMKLMKKDMGGAAHVLGLASMIMAAKLPVRLR
                     VLIPAVENSVSGDAMRPLDVIKTRKGVTVEIGNTDAEGRLILCDALFEAARDKPDLLI
                     DMATLTGAARTALGTDLPALFSNNDLLAGDLLRAGEAESDPMWRLPLHKPYRRMLDSK
                     VADLGNVSDGPYAGAITAALFLQEFVPATTPWAHLDIMAWNTASRPGRPDGGEAMALR
                     AIYSVIEQRFHKN"
     gene            5248..>5589
                     /locus_tag="VLL76_10285"
     CDS             5248..>5589
                     /locus_tag="VLL76_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV29940.1"
                     /translation="MGFQLKAVQALDLWRGAIVESVRRDGPDLSARQMALLLTVYLTP
                     PPHTVRGLALTLNISKPAITRALDRLSELGLVKRKTDDNDRRSVLVQRTVKGSVFLRE
                     FGDLIVAAAQTA"
BASE COUNT          833 a         1935 c         1942 g          879 t
ORIGIN      
        1 cgccgcacaa gccggccgag ccggcgccgc tgctggattt ccgcccggtg ctgcgcgacc
       61 gcccggtgct gggctacgtg ctgggctatg ccgcccacat gtgggaattg ttcgccctgc
      121 gcagttggat ggtggccttc cttgccttcg ccgccctgtc cgggggagcg gggccggcgc
      181 cgaccgaggc ggccatgctg gcatcgctgg tcgccatggc cggcagcatc ggcggcgccg
      241 ccctggcggt gcggttcgac cgccggtcgg tgtgccaggc ggcggccctg ctgtcggctg
      301 tggtcgcggc cggcatcggc ttcactggcg gctggcccta tgggctcgtg gtggggctga
      361 tggtggccta taacgggctg gtgcaactgg attcggcggc gctgaccacc ggcgcggtgc
      421 tcgaaaccga cccggcccgg cgcggcgcca ccatcgccgt gcattccctg accggcttcg
      481 ccgccgcctt cgtcggcccg ctggccttcg gctgggtgct cgacctcgcc ggcggccaat
      541 ccagcgtcac cggctggggc ctggccttcc tgtcggtggc attggtcggt gtgctggggg
      601 tgccggcgct gcgttggtca cgcccctagg atcgccgcca ggccctcgcg gtagctgggg
      661 tatttcagcg ccacccccag ttccgtcttc atgcggtcgt tccgcacccg cttgttgtcg
      721 gcatagaagg acagcgccat gggcgacagg gtggccttgg cctcgtccca cgggatctcg
      781 ggcggcggca tcttgcccag cagggcgtag gcgtgggcga ccacctcctg cggcggggcg
      841 gggtcgtcgt cgcagacatt gtaggcggcg ccgggattgg ggcggtccat cgaggccagc
      901 acggtgcggg cgatgtcttc cacgtggatg cggctgaaca cctggcccgg cttgacgatg
      961 cgccggccgc tgccgtcgcg ggcgttgtcc agggccgaac ggccgggacc gtaaatgccg
     1021 gccaggcgga acaggtggac tggcaggccg ctggccagcc attgccgttc cgccatgacg
     1081 cggcggcgcg agcggtcgag cgtcgggttg gtcggcgcgg tctcgtcgac ccaggcgccg
     1141 ccgcaatcgc cgtacacgcc ggtggtggac agatagccgg cccaggcgat gggcagcgcc
     1201 ttcaacgcct cgcccatgac gtcgagcacc gggtcgccgg ccgcgtcggg cggcaccgac
     1261 gacagcagat gggtggtgcc ggccagggca tgggcgggca ggggatggtc gcggtcgaac
     1321 gggaagattt cgacgccggg caggtccacc gcctcgccgg accgcgtggt gcccgccacc
     1381 cgccagccgc gcgccaccag ctcgcgggcg atcacgcgac ccgaaaagcc caatccgaac
     1441 aggaagaacc gcttgtccat cgcgtatccc ttgccttgca tgccgatccc gtcacactaa
     1501 tgtcgctttg tcgtgcttcc aaggtctcca tgatccgcat cgcatccgtt tccgtcctgc
     1561 tggccgctct ggccctgccg gccgccgccc agaccttcga cggccccaag gcctatgaag
     1621 cctgcctgat catcgccaag aagagtccgg aacagggctg ggaagaggcc atcgcctggc
     1681 aatcgcttgg cggcggcgag gccgcgcgcc attgcgccgc cgtggcgctg atcggcctca
     1741 agaaatacgg cgaggcggcg acgcggctgg agacgctggc caacgaaagc aagcgcgacg
     1801 atgccacccg cgccgagatg ctggcccagg cggcccaggc ctggctgctg gagggcaaca
     1861 ccatgcgcgc cgacgccgcc cagcgggcgg cgctgacgct ggcaccgggc catcccgaaa
     1921 tcctgatgga ccacgccgtg ctgctggccg gcctcaacca tttctccgag gtggtcgagg
     1981 tgttgagctc ggtgctgcgg cgccagccca accgggtcga ggcgttggtg ctgcgggcta
     2041 gcgcgttccg ctatctcgac aacctgccgg gagccgagga tgatgtcgcc aaggccatct
     2101 ccctggaccc cgagttcgcc gacgccctgc tggagcgcgg catgctgcgg cggctcaagg
     2161 gcgaggatgc cggcgcccgc gaggactggc tgaaggtgat cgccctgcag ccagagggcg
     2221 tcgccgccga caccgcgcgg cgcaacctgg aaatgctgga cgtgaaggac aaggatgcag
     2281 aaccgacccg cctacgagat cgccgccggt agcttcgtcg ccgccatgct ggacggccgc
     2341 cgcaccctgt gcctgaaggc cgaacggctg ggcaaggagc acaccaacca tttcctggtg
     2401 ccgctggacc cggtggacga ccgcgcgcgg ctggcgctgc tctacatcga ccccaaccag
     2461 gaactggtcc aggtggacgg cgtccacctg gatttccagg acggccccag cgaaaccgcg
     2521 cccgtggtcg gcgacgcctt tatcaacgac agcggcacca tgctgaagct gctggacgac
     2581 ccccattccc agcgcctgca ctgctatgtc gacctgacca ccggcatggt ccgcgcccgc
     2641 atggaacgcc agatccgccg attgctgagc tggtcggtag gacgggttta aatcaccgca
     2701 gcttgaccgc cgtgccgttg gcgctgacca tcagcatggt cttgttgtcg ccgccgatga
     2761 cctcgtaatc caggtcgacg gcgacgatgg cgtcggcgcc cagggcgcgg gcgcgctcgg
     2821 tcatctcggc caaagcggtt tccttggcct gctgcagcag gctttcatac gacccggcgc
     2881 ggccgccgac cacgtcgcgc acgctggcga acaggtcgcg gaagatgttg gcgcccatca
     2941 cggcgtcgcc cgacacgatg ccgagatact gggcgatggc ggcgccctcg atggcgtcgg
     3001 tggtggtcac gatcatggcg gttctccctc tcaggcgcag gcgttgtgct tccattcctg
     3061 catggccggc aggtcccaga cggcgtcgca ataggccttc gacacccggt ccagcttgat
     3121 ggcgaaggtg gtgaagcggg tcaccaccgg ggcatacatg gcgtcggcga tcgagaagcg
     3181 gccgaacagg aacgggccgt cggcgccgaa gcggtggcgg cattcgttcc agatggcctt
     3241 gatgcgctcg acctcgacca tgacgtcggt ggggatctcg gccagcggcg tgcgcacgca
     3301 cacgtccatg gcgcaggtgt tgcgcagatt ggggaagccg gcatgcatct cggccgagat
     3361 ggcgcgggcg acggcgcggg cctcgcgctc ggccggccac aattccgcct cggggaaggt
     3421 ctcggccacg tattcgcaga tggccagcga gtcccatatc ctcagatcac cgtgcaccag
     3481 cagcggcacc ttgcccgacg gcgaccattt caggatctcg gccttggtgt cgggctggcg
     3541 cagggcgatc tcgacctcgt cgaattcggc gccggccttc ttcagcgcca gccacgggcg
     3601 cagcgaccaa gacgaatagc gcttggtgcc gatgaccagg gtcatggaat cggacatggg
     3661 tcgggcctcc ggacgacagg ggcggccatg atcgcctgca tctcgtccgg ccgcaagacg
     3721 cccccttggg gggcttttct aaacggggca catgggccat ccttggcggc tccggcagca
     3781 ggaaaggaag gcagccttgg tcgagcatct ggttgacgcg gacgcgcagt ccatcgagct
     3841 ggtcgccttg cgcaagtccg gcctgacgca gtggctggcc ggccagcccg aggccacccg
     3901 ccgttgggtc gaggccaacg gctttgccgc cgaggccgcc gccctgttgc cgctgccggc
     3961 cgccgacggc ggtatcgcgc gcatgctggc cggcctgggc gaggacgacg acccctgggc
     4021 cttcgccgcc ctggccgcca agctgcccgc cgcccacagc tatcgcctga ccgaagccat
     4081 ggaatccaag gctgcgtcgt gggcggcgct gtcgtggcaa ttggcgagct attccttcgg
     4141 ccgttacaag acccggccgg cccgcgactg gccccggctg gaatggcccc agggtgccga
     4201 ccggggctgg gtcgagcgcg gcgccaccgc cacccgcctg gtgcgcgacc tcatcaatac
     4261 ccccgccgcc gacatggggc cggccgaact ggccggcgcc gccgagaccc tggccgccaa
     4321 ccatggcgcc ggggtgcggg tgatcgtcgg cgagggcctg ctggccgaga attatcccgc
     4381 catccacacc gtcggccgcg ccgccgccca ccatcgccag ccccggctga tcgacctggt
     4441 gtggggcgac gacaaggcgc cgcgcgtgac cctggtgggc aagggcgtgt gcttcgattc
     4501 cggcggcctc gacctcaagg cttcgtccaa catgaagctg atgaagaagg acatgggcgg
     4561 cgccgcccac gtcctcggcc tcgcctccat gatcatggcg gccaagctgc cggtgcgcct
     4621 gcgcgtgctg atcccggcgg tcgagaattc ggtgtcgggc gacgccatgc ggccgctcga
     4681 cgtcatcaag accaggaagg gcgtcaccgt cgagatcggc aacaccgacg ccgagggccg
     4741 cctcatcctg tgcgacgccc tgttcgaggc ggcgcgcgac aagcccgatc tgctgatcga
     4801 catggcgacc ctgaccggcg ccgcccgcac cgcgctgggc accgatctgc cggcgctgtt
     4861 ctcgaacaac gatttgctgg ccggcgattt gttgcgggcg ggcgaggcgg aaagcgatcc
     4921 catgtggcgg ctgccgctgc acaagcccta tcgccgcatg ctcgacagca aggtggccga
     4981 tctcggcaac gtctcggacg gcccctatgc cggcgccatc acggcggctt tgttcctgca
     5041 ggaattcgtg ccggcgacga cgccgtgggc gcatctcgac atcatggcgt ggaacaccgc
     5101 gtcgcgcccc ggacgccccg atggcggcga ggccatggcg ctgcgtgcga tttattcggt
     5161 gatcgaacag agattccaca agaactgatt gccgtaacga ttgccgtggg ctaaaaaatt
     5221 tcgtcggcgg aacgaacagg gcgggtcatg ggctttcaac tcaaggcggt tcaggcgctc
     5281 gatttgtggc gaggcgccat cgtcgaaagc gtgcggcggg acggccccga tctgtcggcg
     5341 cgccagatgg cgctgctgct caccgtctat ttgacgccgc cgccccacac cgtgcgcggc
     5401 ctggcgctga cgctcaacat ttcgaagcca gccatcaccc gcgccctcga ccgcctgtcg
     5461 gaactgggtc tggtcaagcg caagaccgac gacaacgacc gtcgcagcgt gctggtccag
     5521 cgcaccgtca agggctcggt cttcctgcgc gaattcggcg acctgatcgt cgccgccgcc
     5581 cagaccgcc
//
LOCUS       DATIKR010000648         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_118556, whole genome shotgun sequence.
ACCESSION   DATIKR010000648 DATIKR010000000
VERSION     DATIKR010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118556"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /locus_tag="VLL76_10290"
     CDS             complement(<1..985)
                     /locus_tag="VLL76_10290"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HSV29941.1"
                     /translation="MPALCRDCCVPFKSGPDCPRCGSTRVVEHPDLFALDIAHVDCDA
                     FYASVEKRDRPELADRPVIVGHPGGRGVVTTACYVARKFGPRSAMPMFKALELCPQAV
                     VIPPDMAKYKGVSAAIRVLFERATPLVEPVSLDEAYLDLSDGVRLVDKPAAIVLARLA
                     RAIERRVGITVSVGLSYNKFLAKMASDLNKPRGFSVIGRGEAVGFLAPRPVTAIHGIG
                     PATARRMAELGIDTVAELQGLAEAELVARFGKWGRELFGLVRGEDRRKVTPDRPAKSV
                     SNETTFARDIRDPAALAETLAALAAKVAGRLDRAGLAGGTVVLKLKTADFKV"
     gene            complement(1018..1224)
                     /locus_tag="VLL76_10295"
     CDS             complement(1018..1224)
                     /locus_tag="VLL76_10295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29942.1"
                     /translation="MSGFRTHDGQHSDRMPIKRSLDEKKRLLVQLKEQQAALKPWAAD
                     AIKQALAKRIADLETDLRAAAKRA"
     gene            1383..1459
                     /locus_tag="VLL76_10300"
     tRNA            1383..1459
                     /locus_tag="VLL76_10300"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1417..1419,aa:Arg,seq:cct)
BASE COUNT          272 a          570 c          530 g          239 t
ORIGIN      
        1 gcaccttgaa gtcggcggtc ttgagcttca gcaccacggt gccgccggcc aacccggcgc
       61 ggtccagccg gcccgccacc ttggccgcca gcgccgccag cgtctcggcc agggcggcgg
      121 gatcgcggat gtcgcgggcg aaggtggtct cgttggacac gcttttggcc gggcggtcgg
      181 gcgtgacctt gcggcgatcc tcgccgcgca ccagcccgaa cagctcgcgc ccccacttgc
      241 cgaagcgcgc caccagttcg gcctcggcca gcccctgcag ttcggccacc gtgtcgatgc
      301 ccagctcggc catgcgccgc gccgtggccg ggccgatgcc gtggatggcg gtgaccggcc
      361 ggggcgccag gaagcccacc gcctcgcccc gcccgatcac cgagaagccg cgcggcttgt
      421 tcaggtcgct ggccatcttg gcgaggaact tgttgtagga cagcccgacc gacacggtga
      481 tgccgacccg ccgctcgatg gcgcgggcca ggcgcgccag cacgatggcc gccggcttgt
      541 ccaccaggcg gacgccgtcc gacaggtcga gataggcttc gtcgaggctg accggctcga
      601 ccaacggggt ggcgcgctcg aacaggacgc ggatggcggc cgagacgcct ttgtacttcg
      661 ccatgtcggg cgggatcacc accgcctgcg ggcacagctc cagcgccttg aacatgggca
      721 tggccgagcg cggcccgaat ttgcgcgcca catagcaggc ggtggtgacc acgccgcgcc
      781 cgccgggatg gccgacgatt accgggcggt cggccagctc gggccggtcg cgcttttcca
      841 ccgaggcgta gaaggcgtcg caatccacat gggcgatgtc gagcgcgaac aggtcgggat
      901 gctcgaccac gcgggtcgag ccgcaacggg gacaatcggg tcccgacttg aacgggacac
      961 agcaatcgcg gcacagggcg ggcatgcggg gatgatagcg cccgccctgc gcggttgcta
     1021 ggcgcgcttg gcggcggctc gcaggtcggt ctccaggtcg gcgatgcgct tggccaaagc
     1081 ctgcttgatg gcatcggccg cccacggctt caaggccgcc tgctgctcct tgagctgcac
     1141 cagcaaacgc ttcttctcgt ccagcgaccg cttgatgggc atgcgatcgg aatgctggcc
     1201 gtcatgggtg cgaaagccgc tcatggtcct cctccctgct gaaatggggg ccggaacatg
     1261 accgaacgtc cccgcacgcg caagaggcaa aacaacgcca cccaccccac caccagagcc
     1321 gtttgcgcca cgcccccgag atgctataac caaaccccgc gcccaaaaca gcgcgaccca
     1381 gcgtcccggt agctcagcag gatagagcaa cggtttccta aaccgtaggt caggggttcg
     1441 aatcccttcc gggacgccat ttccttcccc acggaaccgt ctgaaaagac taccttattc
     1501 ccgcttcggg gtccagccca acactgcgca tggtcaagga acacggaaaa ggggatgccg
     1561 gctgcgccgg cagcctgtca gatcaactcc agcacctcat cgcgcgtctt t
//
LOCUS       DATIKR010000649         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_228171, whole genome shotgun sequence.
ACCESSION   DATIKR010000649 DATIKR010000000
VERSION     DATIKR010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228171"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VLL76_10305"
     CDS             <1..802
                     /locus_tag="VLL76_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29943.1"
                     /translation="LALAALLAAAPALAQHENHGAPPPSPNGWTTLPIVEARLKGRMG
                     VELSAPNGAARTMVVTPPKGEKATLDAPGGKASFKPVDGNYHLVTAVDACDVHVATAT
                     TAVYFPNPGAAPTKILKQPAEGLTVVPDKLPREHASYRAGETWVFHVAKDGQPFPGAK
                     VRLETGNGTKAELVSDMEGKVAVTFPEDFPPRDQRPPEAHGRPLQSPFVVAAIVQTGS
                     LQHIGAFNHVYRPGAYDGMSVWAGAGFGLVGMALAAPFVRRRRTGAAP"
     gene            799..1827
                     /locus_tag="VLL76_10310"
     CDS             799..1827
                     /locus_tag="VLL76_10310"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSV29944.1"
                     /translation="MNAFTMMRLRPWVQGASLLTLVYGAGAVGHYMAEKLSNALPALS
                     CAYDKENAGYCVLIPLQHQLHHRLGEGLVKMQAVTAGMVMPLVFTMLTFLAFFIVLNK
                     AFCGWICPLGTVQEWIYKAGRLLGLTTHHVPEARRRRVSSIKWAVLVLLVLVLPLVSG
                     MGFLPHAFRDPWCQICPSRIVTTLLTADAEQVAMPFKGDWSETVFAAIRNLVFGFGAV
                     FALTFRQPFCRICPMLSLHALFRRFAPLRLAKKASSRCDRCGLCAKACPMDIKEVQTE
                     VGAKAFHEDCTLCGRCVAFCPEDGTLSLALGPLPLVRSSKEAFARMTRKESPEGDAKR
                     AKARRVVS"
BASE COUNT          253 a          691 c          604 g          291 t
ORIGIN      
        1 cctcgccctc gccgccctgc tggccgccgc gccggccctg gcccagcacg agaaccacgg
       61 cgccccgccg cccagcccca acggctggac caccctgccc atcgtcgagg ccaggctgaa
      121 gggccgcatg ggcgtcgagc tgtcggcgcc caacggcgcc gcccgcacca tggtggtcac
      181 gccccccaag ggcgagaagg ccacgctcga cgcgcccggc ggcaaggcgt ccttcaagcc
      241 ggtggacggc aattaccacc tggtcacggc ggtggatgcc tgcgacgtcc acgtcgccac
      301 cgccaccacc gccgtctatt tccccaatcc cggcgccgcc cccaccaaga tcctgaagca
      361 gcccgccgag gggctgacgg tggtgccgga caagctgccg cgcgagcatg cctcgtaccg
      421 ggccggcgag acctgggtct tccacgtcgc caaggacggc cagcccttcc ccggcgccaa
      481 ggtgcggctg gagaccggca acggcaccaa ggccgagctg gtgtcggaca tggagggcaa
      541 ggtggccgtc accttccccg aggacttccc gccgcgcgac cagcgcccgc ccgaggccca
      601 cggccggccg ctgcaaagcc cgttcgtggt cgccgccatc gtccagaccg gctcgctgca
      661 acacatcggc gccttcaacc atgtctaccg ccccggcgcc tatgacggca tgtcggtgtg
      721 ggccggcgcc ggcttcggcc tcgtcggcat ggccctggcc gcccccttcg tccgccgtcg
      781 ccgcaccgga gccgcgccat gaacgccttc accatgatgc gcctgcgccc ctgggtgcag
      841 ggcgccagcc tgctgaccct ggtctacggc gccggagcgg tcggccatta catggccgag
      901 aagctgtcga acgccctgcc cgccttgtcc tgcgcctatg acaaggagaa tgccggctat
      961 tgcgtgctga tcccgctgca gcatcagttg caccatcgtt tgggcgaggg cctggtcaag
     1021 atgcaggcgg tcaccgccgg catggtgatg ccgctggtgt tcaccatgct gaccttcctg
     1081 gccttcttca tcgtgctgaa caaggcgttc tgcggctgga tctgcccgct gggcacggtg
     1141 caggaatgga tctacaaggc cggccgcctg ctgggcctga ccacccacca tgtgcccgag
     1201 gcgcggcgcc ggcgggtgtc gtcgatcaaa tgggcggtcc tggtcctgtt ggtgctggtg
     1261 ctgcccctgg tctccggcat gggcttcctg ccccacgcct tccgcgaccc gtggtgccaa
     1321 atctgtccgt cgcgcatcgt caccaccttg ctgaccgccg acgccgagca ggtggcgatg
     1381 ccgttcaagg gcgactggtc ggaaacggtg ttcgccgcca tccgcaacct ggtgttcggc
     1441 ttcggggcgg tgttcgccct gaccttccgc cagccgttct gccgcatctg ccccatgctg
     1501 tcgctgcacg ccctgttccg ccgcttcgcg cccctgcgcc tggccaagaa ggcgagttcg
     1561 cgctgcgatc gctgcggcct gtgcgccaag gcctgcccca tggacatcaa ggaggtgcag
     1621 accgaggtgg gcgccaaggc gttccacgag gattgcaccc tgtgcggccg ctgcgtcgcc
     1681 ttctgccccg aggacggcac gctgtccttg gcgctggggc cgttgccgct ggtgcggtcg
     1741 tcgaaggagg cgttcgcccg catgacccgc aaggaaagcc ccgagggcga tgccaagcgg
     1801 gccaaggccc ggcgggtggt gtcatgaccc ccgacgcgg
//
LOCUS       DATIKR010000650         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_130656, whole genome shotgun sequence.
ACCESSION   DATIKR010000650 DATIKR010000000
VERSION     DATIKR010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130656"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(104..193)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     regulatory      complement(195..286)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            490..>1600
                     /locus_tag="VLL76_10315"
     CDS             490..>1600
                     /locus_tag="VLL76_10315"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HSV29945.1"
                     /translation="MSIVQMSDDERRRFLPHYPDDYFTLGAPVGPGQPNRREDVLKVE
                     TILGNLGRHDLDRTAGPLGWWGQAHETAVKGWQGDNGLKVDGVLKPGGPTIGSLRKVA
                     GGLLGGFTPPSPAQVDKHHTRLHQGEAGLLNTRPARLSLPKPEAPLELDEQSQAFNAD
                     TARALTRTSVDGDVPSIYANFLKQAGTDGHATLFDLAEQIESSSGRDRADRVLHGIVG
                     RLPGEGAKALLGGAPPAKRPLGVLAAELPDDDKVPLFRAAAGPKMQAMATAQASKPGS
                     DDVLTVPASGPAEPGAQAPDPQKPVQTAWVGPAAQAVRTIGPYLLPLVGGAIQTMQGQ
                     QEKKPEGQQTTVADPEAGKPQALPGPNVTQPQPKPS"
BASE COUNT          276 a          573 c          526 g          225 t
ORIGIN      
        1 cggcgtggtc agcagcgggg cgtcggattg agtcaacggt tcctcctgaa cccgcgtggc
       61 gcgggcgaga ttcggggcgc ggttgtggcg ttgccacgtg cccccctctg tctcggaacc
      121 tgaaagattc accgccagaa agcggcttac atcgtcggtg aagccgggca ttcccggcct
      181 gctttccaga gagtcatccc cccgcggtcc ttttgcctga gagtttccag gggcggttgc
      241 tccttcggcg ccgccccaaa ggacggtctc tcccggcggg gatcatctgt gccggtgagt
      301 ttacggatgc cgccgcccga gtcaacgccg ttagcgaagc gttaacaatt cgacgccgat
      361 taggaacagc gcctcggcac atcggtatat tttcctttac agccacaggt ggatgtgctt
      421 tcctgtgggc caaccagggc gagtccatca cggtccgccc cattttttgg agacgcagga
      481 gaacaaatca tgtccatcgt gcagatgtcc gacgacgagc ggcgccggtt cctcccccat
      541 taccccgacg actacttcac cctcggcgcc ccggtcggcc ccggccagcc caaccgccgc
      601 gaggatgtgc tcaaggtcga gacgatcctg ggcaatctcg gccgccatga cctggaccgc
      661 accgccggcc cgctgggctg gtggggccag gcgcacgaga cggccgtcaa gggctggcag
      721 ggcgacaacg ggctcaaggt ggacggcgtg ctcaagccgg gcggcccgac catcggcagc
      781 ctcaggaagg tggcgggcgg cctgttgggc gggttcacgc cgccgagtcc ggctcaggtg
      841 gacaagcatc acacccgcct gcaccagggc gaggccgggc tgctcaacac ccgtccggcg
      901 cggctgtcgc tgcccaagcc cgaggcgccg ctggagctgg acgagcagag ccaggccttc
      961 aacgccgaca ccgcccgcgc cctgacccgg accagcgtcg acggcgacgt gccgtcgatc
     1021 tacgccaatt tcctcaagca ggccggcacc gacggccatg ccacattgtt cgacctggcc
     1081 gagcagatcg aatccagctc gggccgcgac cgcgccgacc gggtgctgca cggcatcgtc
     1141 ggccgattgc cgggcgaagg cgccaaggcc ctgctgggcg gcgccccgcc cgccaagcgc
     1201 cccctcggcg tgctggccgc cgaactgccc gacgacgaca aggtgccgct gttccgggcg
     1261 gcggcggggc cgaagatgca ggcgatggcc accgcgcagg catctaaacc cggcagcgac
     1321 gacgtgctga ccgtcccggc ttccgggccg gccgagccag gggcgcaggc ccccgacccg
     1381 caaaagccgg tgcagacagc ctgggtgggg ccggccgccc aagcggtacg gaccatcggc
     1441 ccctatcttc tgcctctcgt gggcggtgcg atccaaacaa tgcaaggaca gcaggagaaa
     1501 aagccggagg gccagcaaac caccgtcgcc gaccccgagg ccggcaagcc gcaggcactc
     1561 cccggcccga atgtcaccca accccaaccc aagccgagca
//
LOCUS       DATIKR010000651         2083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_82938, whole genome shotgun sequence.
ACCESSION   DATIKR010000651 DATIKR010000000
VERSION     DATIKR010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82938"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VLL76_10320"
     CDS             <1..430
                     /locus_tag="VLL76_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29946.1"
                     /translation="AREVTLAAAESERRKKDDESFVDALIADGKLRPTEKTDVLAELA
                     ALDDGAPTIELAAGDDGQKVKLNPRQAYRRRLSAAPKLVELGKHGDPGGPGVEPVVEF
                     AAPDGYQVDHTQLDLHARAQAYQRAHPGTPYLAAVKAVSK"
     gene            443..793
                     /locus_tag="VLL76_10325"
     CDS             443..793
                     /locus_tag="VLL76_10325"
                     /inference="COORDINATES: protein motif:HMM:NF021473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid cement protein"
                     /protein_id="HSV29947.1"
                     /translation="MTQPMSMAIYTRSVLAVGAVTQRRAVKASGAQATVQGEKVLGIA
                     QYNAPDKGDLALDVLGTAVAEAGAAVAADDDLITDAQGRLIPATGAGGEIVCARALSA
                     ASGAGKLLEVLLKP"
     gene            807..1778
                     /locus_tag="VLL76_10330"
     CDS             807..1778
                     /locus_tag="VLL76_10330"
                     /inference="COORDINATES: protein motif:HMM:NF015802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HSV29948.1"
                     /translation="MPPLPPAAGPHTVRMVDPVLTTVAQGYRNAKSVGNALFPSVPVF
                     ARAGIILKFGDESFRLYNLRRAPGGPVLEVQFGYDGGQYSIKQNALSAKIPVEIQAEA
                     QNVHNVDLGAGAMAMTMQIQDLAMEYEQAGLARNAANYDADHKIALGAGTEWSDPDSN
                     PLTQISTGKEAISDTTGEDANTFVLSPKAWKGVRENPHVVERFKYTTSGPVTLQQFAA
                     LIEVDNVAIGRKRYVDDDGAFQPVWGNDAILAWVAPGARSTEAAPNPLQRAMPSYGYT
                     YTLQGSPVAEQPYYDNDTRSWKYPTIHEAQPQLTGMLAGYLFQGAGG"
     gene            1781..>2083
                     /locus_tag="VLL76_10335"
     CDS             1781..>2083
                     /locus_tag="VLL76_10335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29949.1"
                     /translation="MAHYIVITPLLRPGGKTLAPGTPVELSDDQGEKLERSGAVAKVV
                     DGSAVPVPGTVGDHVVGEIAVILAGVEGLPKGRTIVAAVEWLVDTLAARTIELAEIK"
BASE COUNT          363 a          770 c          669 g          281 t
ORIGIN      
        1 ggcccgcgag gtcacgctgg cggccgccga aagcgagcgc cgcaagaagg acgacgaaag
       61 cttcgtcgat gccctgatcg ccgatggcaa gctgcgcccg accgaaaaga cggacgtgct
      121 ggccgagctg gcggcgctgg acgatggcgc tcccaccatc gagctcgccg ccggcgacga
      181 tggccagaag gtcaagctca acccccgcca ggcctaccgc cgccgcctgt cggccgcgcc
      241 caagctggtc gagctcggca agcatggcga tccgggcggc cccggcgtcg agccggtcgt
      301 cgagttcgcg gcgcccgacg gataccaggt cgaccacacc cagctggatc tgcacgcccg
      361 ggcgcaagcc taccagcgtg cccacccggg cacgccctac ctggccgccg tcaaggccgt
      421 gagcaagtaa ggagtcccgt ttatgaccca acccatgtcc atggccatct acacccgctc
      481 ggtgctggcc gtcggcgccg tcacccagcg ccgcgcggtc aaggccagcg gtgcccaggc
      541 gaccgtccag ggcgaaaagg tgctgggtat cgcccagtat aacgcccccg acaaaggcga
      601 cctggcgctt gacgtgctgg ggaccgccgt ggccgaggcc ggcgccgccg tcgcggctga
      661 tgacgacctg atcaccgacg cccagggccg tctgattccc gccaccggcg ccggtggcga
      721 gatcgtctgc gcccgtgccc tgtcggccgc ctccggcgcc ggcaaactgc tcgaagtcct
      781 gctgaagccc taaggagacg cagctcatgc ccccgcttcc ccctgccgcc ggcccgcata
      841 ccgtccggat ggtcgatccg gtcctgacca cggtcgccca gggctaccgc aacgccaaga
      901 gcgtcggcaa cgccctgttc ccgtccgtgc ccgtcttcgc ccgcgccggc atcatcctga
      961 agttcggcga cgaatccttc cgcctgtaca acctgcgccg cgcccccggc ggcccggtgc
     1021 tggaagtgca gttcggttat gacggcggcc agtacagcat caagcagaac gccctgtccg
     1081 ccaagatccc ggtggagatc caggccgagg cgcagaacgt ccacaacgtc gacttgggcg
     1141 ccggcgccat ggccatgacc atgcagatcc aggatctggc catggaatac gagcaagcgg
     1201 gcctggcccg caacgccgcg aattacgacg ccgaccacaa gatcgcgctg ggcgccggca
     1261 ccgaatggtc cgaccccgac tccaacccgc tgacccaaat ttccaccggc aaggaggcca
     1321 tcagcgacac caccggcgaa gacgccaaca ccttcgtgct gtcgcccaag gcgtggaagg
     1381 gtgtgcgtga aaacccgcat gtggtcgagc gtttcaagta caccacttcg ggccccgtca
     1441 ccctgcagca atttgccgcg ctgatcgagg tcgacaacgt ggcgatcggc cgcaagcgct
     1501 acgtcgatga cgacggcgcc ttccagccgg tgtggggcaa cgacgccatc ctggcatggg
     1561 tcgcgccggg tgcccgcagc acggaagccg cgcccaaccc gctgcagcgg gccatgccgt
     1621 cctatggtta cacctacacg ctgcagggtt ccccggtcgc cgagcagccc tactacgaca
     1681 acgacacccg gtcgtggaag tacccgacca tccacgaggc gcagccccag ctgaccggca
     1741 tgctggccgg ctacctgttc cagggcgccg ggggttgacc atggcgcact acatcgtcat
     1801 cacccccctc ctgcggccgg gcggcaagac gcttgccccc ggcacgccag tcgaactgtc
     1861 cgacgaccag ggcgagaagc tggaacgctc gggcgcggtg gccaaggtgg tggacggctc
     1921 ggccgtcccg gtgcccggca ccgttggcga ccacgtcgtc ggagagatcg ccgtcatcct
     1981 cgccggcgtc gaggggctgc ccaagggccg aacgatcgtc gcggcggtgg aatggctggt
     2041 cgacaccctt gcggcccgca ccatcgagct ggcggagatc aag
//
LOCUS       DATIKR010000652         4988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_215897, whole genome shotgun sequence.
ACCESSION   DATIKR010000652 DATIKR010000000
VERSION     DATIKR010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4988
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215897"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..740
                     /locus_tag="VLL76_10340"
     CDS             99..740
                     /locus_tag="VLL76_10340"
                     /inference="COORDINATES: protein motif:HMM:NF012659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T2"
                     /protein_id="HSV29950.1"
                     /translation="MIRLTQIATLLFLFTLPAWAQQKAEPGRFDYYVLSLSWSPTWCA
                     SKAGREDFEQCGGLRRHGFVVHGLWPQYAKGGFPAQCATPTPLPGKLVEDMLPLMPSR
                     KLIEHEWAKHGTCAGGDAQSYFAATRAARDKLRIPAPFAAPDRPVSVPVAEVERMFIA
                     ENPGLTPEAIAVTCRGRHAAEIRVCLTRDLKFRDCGRDIRDRCRDGANFPPDR"
     gene            918..1319
                     /locus_tag="VLL76_10345"
     CDS             918..1319
                     /locus_tag="VLL76_10345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSV29951.1"
                     /translation="MLVAWNDEHALGYDVIDAGHRLVIDAINRLNQCTGHHADRPVVG
                     EVLQMLDGQLARQFHHEEALMMVSRSRRLEAQRHEHRRMMDTLAHLRASFEAGQQVSS
                     LLLLNLVAFLKSHLRGSDVEEFRDAPVRYAA"
     gene            complement(1382..1621)
                     /locus_tag="VLL76_10350"
     CDS             complement(1382..1621)
                     /locus_tag="VLL76_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HSV29952.1"
                     /translation="MALKITDDCTSCDACVPVCPNEAITAGDVIYVIDEDKCTECVGA
                     DDTPQCQLVCPADCIVEGKSETQEELQAKYAKLHG"
     gene            1887..3614
                     /locus_tag="VLL76_10355"
     CDS             1887..3614
                     /locus_tag="VLL76_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HSV29953.1"
                     /translation="MTLAAFDSVSVALCGSGGSGVMTAANMLLDAAAASGYYALFGRS
                     SGPQIRGGEAAGMLRLSPRQVTSVDDVTDILLAIDWQNVQRFAAELPLAPSSLIVADP
                     AAGDIPEALARSGARVAHLPMKDLAKQVPDGRANMVAVGAMAALVGLPINALADVLGK
                     SLKKKHADALDASLAAARLGAEAAAALGPAKRLAPPCPAAGRWTITGNQAVGLGAVKG
                     GIRFVAAYPITPATEVLEWLSSALPKIGGAFVQAEDELASINMCLGASFGGVPALTAT
                     SGPGLALMIEALGLSVASETPVVVVDVQRGGPSTGIPTKSEQADLDIAIHGLHGDAPH
                     LVVAPQSTADCLFTTQWAVHLAETLQAPCLVLSDQALGQARAIIDAPPDTTFAGGRRL
                     AEGGEAYRRYAVTESGVSPMALPGMEGLQYTADGLEHSETGTPSSQAADHAAQLDKRN
                     RKLAEHDYGDPWAVVEGDGEIAVVTWGSCTGAAREAVERARAQGVAARLVALRLLSPA
                     LPAAMARALAGVKSVLVVEQSHSGQFHKYLRAEYDLPARVDSLHRPGPLPIRPAEVVA
                     RLLALGGAA"
     gene            3611..4441
                     /locus_tag="VLL76_10360"
     CDS             3611..4441
                     /locus_tag="VLL76_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HSV29954.1"
                     /translation="MTTYQPKDFKSEVKPVWCPGCGDFGVLSSFTKAFADLGLAPHEV
                     AVVSGIGCSSRIPAYTHCYGFHGIHGRALPIGAGLKLARPELTVVVTGGDGDGFSIGG
                     NHFLHACRRNVDMAYVVMDNRVYGMTKGQPSPTTEDDWDNSAMAPPGGTGVAPFNPLA
                     IAVAAGANFVARGFSGDPNGTAALIAEAIRHPGFSVVVVLSPCVTFREEERGWKETVR
                     PCPEPPTADPAEAARRLMTDDGFNVGVVYKGSRPPYRPYQAEARGLDGLAAAFAVTPS
                     "
     gene            complement(4428..>4988)
                     /locus_tag="VLL76_10365"
     CDS             complement(4428..>4988)
                     /locus_tag="VLL76_10365"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV29955.1"
                     /translation="GAHVLGVECSPRQLKKAWAADKVADEEIVEGVGQALPVPDASAD
                     VVVFFNSLHHVPAEFMAKSLEEAARVLKPGGLVYISEPLAEGVFYQVCRPIDDEATVR
                     AQAYDALKAAPGFAQAQEFRYIHTVAMKSYEAFRDRIISANSEREAKFERMDAEMRDL
                     FAAKAMMRDGSFCFDQPMRVNVLRKV"
BASE COUNT          775 a         1763 c         1630 g          820 t
ORIGIN      
        1 cacaacggtc ggcggtccgt aacgcatcat ttttccctag attcggagaa ggcgggcagc
       61 atacagagga tcgaagctct actccagtcc ccaccgtgat gatccgcctt actcagatcg
      121 caaccctgct tttccttttc accctaccgg cttgggcaca gcagaaagcc gagccgggcc
      181 gattcgacta ttacgtcctg tcgctgtcat ggtcgccgac atggtgcgca agcaaggcgg
      241 gccgcgagga tttcgagcaa tgcggcggat tgcggcgcca tggcttcgtg gtgcacgggc
      301 tgtggccgca atatgccaag ggcggtttcc ccgcccaatg cgcgacgccc accccactgc
      361 cgggcaagct ggtcgaggac atgctgcccc tgatgcccag ccgcaagctg atcgagcacg
      421 aatgggccaa gcacggcacc tgcgccggcg gcgacgccca aagctatttc gccgccaccc
      481 gcgccgcccg cgacaagctc cgtattccgg ccccgttcgc cgccccggac cggccggtct
      541 cggtgccggt ggccgaggtc gaacgcatgt tcatcgccga gaatcccggc ctcacccccg
      601 aagccatcgc cgtcacctgc cgcggccgcc acgccgccga aatccgcgtc tgcctgaccc
      661 gcgacctcaa gttccgcgat tgcggccgcg acatccgtga tcggtgccgg gatggagcga
      721 attttccacc ggaccgatag cgatctggtc tacggcatcc accccaccgc ctaaggcctc
      781 cacccgacaa gtagcgcgaa gtattgatcg caaagcgcga aaaatacggt tcgcacctga
      841 ttgtctacgg gtgtcgtccg gcgcattgtc ccgaccacag tgattggggt ttgggacgac
      901 cgcgaggata tcgagccatg ttggttgctt ggaatgacga acatgcattg ggttatgatg
      961 ttatcgacgc cggccatcgc ctggtgatcg acgccatcaa ccgcttgaac caatgcaccg
     1021 gccatcacgc cgaccgtccg gtggtgggcg aagtgctgca gatgctggac ggccagttgg
     1081 cgcgccagtt ccaccatgaa gaggcgttga tgatggtgtc gcgctcgcgc cgcctggagg
     1141 cgcagcgcca cgagcaccgc cgcatgatgg acaccctggc ccacctgcgc gcctcgttcg
     1201 aggccggcca gcaggtcagc agcctgctgc tgctgaatct ggtggccttc ttgaagtcgc
     1261 acctgcgcgg ctcggacgtc gaggaattca gggacgcgcc ggtccgctac gcggcgtaat
     1321 gctcaccgca acgaaaaacc cccggcgctt ggggcgccgg gggtttttgc tgggatagat
     1381 ctcagccgtg cagcttggcg tacttcgcct gcagctcttc ctgagtctcg gacttgcctt
     1441 cgacgatgca gtcggccggg cacaccagct ggcactgggg cgtatcgtcg gcgccgacgc
     1501 attcggtgca cttgtcctca tcgatcacgt agatgacgtc gccggcggtg atcgcctcgt
     1561 tcgggcacac cggcacgcag gcgtcgcagc tggtgcagtc gtcggtaatc ttgagagcca
     1621 tctttctttt tcctctctta cattccccgt cggagtgccc gcccaggttt gcggctgcta
     1681 tcccgttcgc aacaggcccc gatgcaaagg gcgtatatcg atttgtgggg catgttgaca
     1741 atcaaaattc acaaatcgct tatgcattga aagaatatga cccgaccgaa cgggtagcat
     1801 ccccctaatt gcgcgcccaa atcgcgctcg ccggggctag cgggcgggga tatcatgtct
     1861 ttcagacata cgcgggagcc gcgatcatga ccctggccgc cttcgactcg gtatccgtcg
     1921 ccctgtgcgg cagcggcggc agcggggtga tgaccgccgc caacatgctg ctcgatgccg
     1981 ccgccgcgtc cggctattac gccctgttcg gccgctcgtc ggggccgcag atccggggcg
     2041 gcgaggcggc gggcatgctt cggctgtcgc cccgccaggt gacctcggtg gacgacgtca
     2101 ccgacatcct gctggccatc gactggcaga acgtgcagcg cttcgccgcc gaactgccgc
     2161 tcgccccctc cagcctgatc gtcgccgacc cggcggccgg cgacatccca gaggctttgg
     2221 cgcgatccgg ggcgcgcgtc gcccatctgc ccatgaagga cctggccaag caggtgccag
     2281 acggccgcgc caacatggtg gcggtcggag ccatggcggc cttggtcggc ctgcccatca
     2341 acgcgctggc cgacgtgctg ggcaagagcc tcaagaagaa gcacgccgac gccctcgacg
     2401 cctcgctggc cgccgcccgc ctgggcgccg aagccgccgc cgcgctgggg ccggccaagc
     2461 gcctggcccc gccctgcccc gccgccgggc gttggaccat caccggcaac caggcggtcg
     2521 ggctgggcgc ggtcaagggc ggcatccgct tcgtcgccgc ctatcccata acccccgcca
     2581 ccgaagtgct ggaatggctg tcctctgccc tgcccaagat cggcggtgcc ttcgtccagg
     2641 ccgaggacga actggcctcc atcaacatgt gcctgggcgc cagcttcggc ggcgtgccgg
     2701 cgctgaccgc cacctcgggg ccgggcctgg cgctgatgat cgaggcgctg ggcctgtcgg
     2761 tggcgtccga gacgccggtg gtggtggtgg acgtccagcg cggcggcccc tcgaccggaa
     2821 tccccaccaa gtcggaacag gccgacctgg acatcgccat ccacggcctg cacggcgacg
     2881 cgccccatct ggtggtggcg ccgcaatcca cagcagactg cctgttcacc acgcaatggg
     2941 cggtgcatct ggccgagacc ctgcaggcgc cctgcctggt gctgtcggac caggctttgg
     3001 gccaggcccg cgccatcatc gacgcgccgc ccgacaccac cttcgccggc ggccgccgac
     3061 tggccgaggg gggcgaggcc tatcgccgct atgccgtgac cgaatccggt gtgtcgccca
     3121 tggcgctgcc gggcatggag gggctgcaat acaccgccga cgggctggag cattccgaga
     3181 ccggcacacc gtcgagccag gcggccgacc acgcggcgca attggacaag cgcaaccgca
     3241 agctggcgga acatgactac ggcgatccct gggccgtcgt cgagggcgac ggcgagatcg
     3301 cggtggtgac ctgggggtcg tgcaccggcg ccgcccgcga ggccgtcgag cgcgcccgtg
     3361 cccaaggcgt ggcggcgcgg ctggtggcgc tgcgactgct gtcgccggcc ttgcccgccg
     3421 ccatggcccg cgcgctcgcc ggggtgaaat ccgtgctggt ggtggagcaa agccattccg
     3481 gccagttcca caaatacctg cgggccgaat acgacctgcc ggcgcgggtg gactcgctgc
     3541 accgccccgg cccgctgccc atccgtcccg ccgaggtcgt cgcgcgcctg ctggcgctgg
     3601 gaggtgccgc atgaccacct atcaacccaa ggacttcaag tccgaggtca agccggtgtg
     3661 gtgccccggc tgcggcgatt tcggcgtgct gtcgtccttc accaaggcct tcgccgatct
     3721 gggcctggcg ccgcacgagg tcgcggtggt gtcgggcatc ggctgctcgt cgcgcatccc
     3781 cgcctacacc cattgctacg gcttccacgg catccacggc cgggcgctgc ccatcggcgc
     3841 cggactgaag ctggcgcggc ccgagttgac ggtggtggtc accggcggcg acggcgacgg
     3901 cttttccatc ggcggcaacc acttcctgca cgcctgccgc cgcaacgtcg acatggccta
     3961 tgtggtgatg gacaaccgcg tctacggcat gaccaagggc cagccctcgc ccaccaccga
     4021 ggacgattgg gacaattccg ccatggcgcc gcccggcggc accggggtgg cgccgttcaa
     4081 cccgctggcc atcgcggtgg cggccggcgc caatttcgtg gcgcgcggct tttcgggcga
     4141 ccccaacggc acggcggcgc tgatcgccga ggcgatccgc catcccggct tctcggtggt
     4201 ggtggtcttg agcccctgcg tcaccttccg cgaggaggaa cgcggctgga aggaaaccgt
     4261 ccgcccctgc cccgagccgc ccaccgccga cccggccgag gccgcccgcc gcctgatgac
     4321 ggacgacggc ttcaatgtcg gcgtggtcta caagggatcg cggccgccct atcgcccgta
     4381 tcaggccgaa gcgcgcggct tggacggatt ggcggcggcg ttcgccgtca caccttcctg
     4441 aggacgttca cccgcatcgg ctggtcgaag cagaagctgc cgtcgcgcat catcgccttg
     4501 gcggcgaaca ggtcgcgcat ttcggcatcc atgcgctcga acttggcctc gcgctcgctg
     4561 ttggccgaaa tgatgcggtc gcggaaggcc tcgtaggact tcatcgccac cgtgtggatg
     4621 tagcggaatt cctgggcctg ggcgaagccc ggcgccgcct tcagggcgtc gtaggcctgg
     4681 gcccgcacgg tggcctcgtc gtcgatggga cggcagacct gatagaacac gccctcggcc
     4741 aacggctccg agatgtagac cagccccccc ggcttgagca cgcgggcggc ctcctccagc
     4801 gacttggcca tgaactccgc cggcacgtgg tgcagcgagt tgaagaacac caccacgtcg
     4861 gcactggcat cggggaccgg cagcgcctgg ccgacgccct cgacgatctc ctcgtccgcc
     4921 accttgtcgg cggcccaggc cttcttcaac tggcgcgggc tgcattcgac gcccagcaca
     4981 tgggcgcc
//
LOCUS       DATIKR010000653         3279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_155255, whole genome shotgun sequence.
ACCESSION   DATIKR010000653 DATIKR010000000
VERSION     DATIKR010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155255"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VLL76_10370"
     CDS             complement(<1..737)
                     /locus_tag="VLL76_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSV29956.1"
                     /translation="MRLLIIGTLDGQIGAASQIAMARGAKVSIAEDVEQGLDVLRNQG
                     ADLVMVDVKRDIKTLMESIEAERIVVPVIACGIASDASAAVRAIKAGAKEYIPLPPDA
                     ELIAAVLSAVTEESHSIIFKDPRMMQAMKMAEQVAGSHASILITGESGTGKELMARFI
                     HNKSPRAKNRFVAVNCAAIPENLLESELFGHEKGAFTGAVGARKGRFEMADGGTLFLD
                     EISEIDASLQVMLLRVLEERTFERVGG"
     gene            complement(770..1093)
                     /gene="fliN"
                     /locus_tag="VLL76_10375"
     CDS             complement(770..1093)
                     /gene="fliN"
                     /locus_tag="VLL76_10375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HSV29957.1"
                     /translation="MADFELNDFKADDDGGAGDIPEVPRSARDLEAVYDIPVQVSAVL
                     GKATMQVNQLLKLGRGAVVELDRKVGEAIDIYVNNRLVARGEVVVVEDRLGVTMTEII
                     KTDRG"
     gene            complement(1231..1941)
                     /locus_tag="VLL76_10380"
     CDS             complement(1231..1941)
                     /locus_tag="VLL76_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HSV29958.1"
                     /translation="MTKPRKYMFDLDFDHPNGAPKAVEPAAAPAVEELPPEPEPEPPP
                     MFSEEELAIARDSAFEEGRQAGLAEAAEATERMIAQALGTIAGQMDAIFRAQEEANDD
                     NARTAARVGLAVVKKMLPAACAKHAFDEVAQVVEEVIGHILDEPRIIVRVGDGLVEPV
                     RERLEAVAQSHGFEGRVVVQADPRLVAGDCRVEWTDGGAERDQARLMQEIEAAVERAL
                     APAEAGFGGGGDGEFAGT"
     gene            complement(1943..2962)
                     /gene="fliG"
                     /locus_tag="VLL76_10385"
     CDS             complement(1943..2962)
                     /gene="fliG"
                     /locus_tag="VLL76_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HSV29959.1"
                     /translation="MARIKEDYRSLTGPQKAAIMMLSLGEDHSARLFGMMADDEIKEL
                     SQIMANLGTVSSNIVERLFVEFADQISSTGSLVGSQESTERLLLKALPKDRVSSIMEE
                     IRGPAGRTMWDKLGNVNEQVLANYLKNEYPQTVAVVMTKIKADHAARVLALLPENFSM
                     EVIMRMLRMEAVQKEVLDGVEKTLRTEFMSNLARTQRRDAHELMADIFNNLDRNAENR
                     FMSALEERNRESAERIKSLMFTFEDLTRIDAAGIQTLLRQVEKDKLGMALKGGSDAVK
                     DLFFKNMSERAGKMLREDMEAMGPVRLRDVDQAQSAIVAIAKELAASGQIVISEGREE
                     DELVY"
     gene            complement(3074..>3279)
                     /locus_tag="VLL76_10390"
     CDS             complement(3074..>3279)
                     /locus_tag="VLL76_10390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29960.1"
                     /translation="LLEGQPHLVGEFGLAEPPQRPHQAELLADMDIDGMGIAALGLAT
                     AFGPACLHGILALIALNERISRE"
BASE COUNT          507 a         1124 c         1014 g          634 t
ORIGIN      
        1 ttccccccca cgcgctcgaa cgtccgctcc tccagcacgc gcagcagcat cacctggagc
       61 gaggcgtcga tctccgagat ttcgtcgagg aacagcgtgc cgccgtcggc catctcgaag
      121 cggcccttgc gcgcgccgac ggcgccggtg aaggcgccct tctcgtggcc gaacaactcg
      181 gattccagca ggttttccgg aatggcggcg cagttgacgg cgacgaagcg gttcttggcg
      241 cgcggcgact tgttgtggat gaagcgggcc atcagctcct tgccggtgcc cgattcgcca
      301 gtgatcagaa tcgaggcgtg cgagcccgcc acctgttccg ccatcttcat ggcctgcatc
      361 atgcgcgggt ccttgaagat gatggaatgg ctttcctcgg tcaccgccga cagcacggcg
      421 gcgatcagct cggcgtcggg cggcagcggg atgtattcct tggcgccggc cttgatggcg
      481 cgcacggcgg ccgaggcgtc cgacgcgatg ccgcaggcga tgaccggcac cacgatgcgc
      541 tcggcctcga tgctttccat cagggtcttg atgtcgcgct tgacgtcgac catcaccagg
      601 tcggcgccct ggttgcgcag cacgtccagg ccctgttcca cgtcctcggc gatgctgacc
      661 ttggcgccgc gtgccatggc gatctggctg gccgcgccga tctgtccgtc aagggtgccg
      721 atgatcagta atcgcatcgc ttgtctctcc gtcctcgaag ccggtcagcc tagccgcggt
      781 cggtcttgat gatttccgtc atggtcacgc ccaggcggtc ttcgaccacc accacttcgc
      841 cgcgggcgac caggcggttg ttgacgtaga tgtcgatggc ctcgccgacc ttgcggtcca
      901 gctccaccac cgcgccgcgt cccagcttca gcaactggtt cacctgcatg gtggccttgc
      961 ccagcacggc cgagacctgc accgggatgt cgtagaccgc ttcgaggtcg cgcgccgacc
     1021 gcggaacctc ggggatgtcg ccggcgccgc cgtcgtcgtc cgccttgaag tcgttcagtt
     1081 cgaaatcggc catcacattc tcctttagac ccagtccagg cctgagccga aaccggtcta
     1141 gcttaccaag gtacgcccgc acatccgtgc gggcttaggc tcaaacgccg ctcgggcttg
     1201 tcgcgtgtcc acgctctgcg tgaacccgct ctaggtcccg gcgaactcgc cgtcgccgcc
     1261 accgccgaag ccggcctcgg ccggcgccag ggcgcgttcg accgcggcct cgatttcctg
     1321 catcagccgc gcctggtcgc gttcggcgcc accgtcggtc cattccaccc ggcaatcgcc
     1381 ggccaccagc cggggatccg cctgcaccac cacgcggccc tcgaaaccgt gggattgggc
     1441 caccgcttca aggcgctcgc gcaccggctc gaccaagccg tcgccgaccc gcacgatgat
     1501 gcgcggctcg tccaggatgt ggccgatcac ctcttccacc acctgcgcca cctcgtcgaa
     1561 ggcatgcttg gcgcaagccg caggcagcat cttcttgacc accgccaggc cgacgcgggc
     1621 ggcggtgcgg gcattgtcgt cgttggcctc ttcctgcgcc cggaaaatgg catccatttg
     1681 gccggcgatg gttcccagcg cctgcgcgat catgcgttcg gtcgcctcgg cggcctcggc
     1741 cagaccggcc tggcggccct cctcgaaggc ggaatcgcgg gcgatggcca gctcttcctc
     1801 cgagaacatg ggcggcggct ccggctcggg ctcgggcggc agttcctcga ccgccggcgc
     1861 ggcggccggc tccacggcct tcggcgcccc gttggggtgg tcgaagtcga ggtcgaacat
     1921 gtacttcctg ggcttggtca tctcagtaca ccagctcgtc ttcctcgcgg ccctcggaga
     1981 tgacgatctg gcccgaggcg gccagttcct tggcgatggc gacgatggcc gactgcgcct
     2041 ggtcgacgtc gcgcaggcgc accgggccca tggcctccat gtcttcgcgc agcatcttgc
     2101 cggcgcgttc cgacatgttc ttgaagaaca ggtccttgac cgcgtccgag ccgcccttga
     2161 gcgccatgcc cagcttgtcc ttctcgacct ggcgcagcag ggtctggatg ccggcggcgt
     2221 cgatgcgggt caggtcctcg aaggtgaaca tcaggctctt gatgcgctcg gccgattcgc
     2281 ggttgcgctc ttccagggcc gacatgaagc ggttctcggc gttgcggtcg aggttgttga
     2341 agatgtcggc catcagttcg tgggcgtcgc ggcgctgggt gcgggccagg ttgctcatga
     2401 actcggtgcg cagcgtcttt tccacgccgt ccagcacttc cttctgcacc gcctccatgc
     2461 gcagcatgcg catgatgact tccatcgaga aattctcggg cagcagcgcc agcacccgcg
     2521 cggcgtggtc ggccttgatc ttggtcatca ccacggccac ggtctgcggg tactcgttct
     2581 tcagataatt cgccagcacc tgctcgttca cattgccgag cttgtcccac atggtgcggc
     2641 cggcggggcc gcggatttct tccatgatcg agctgacgcg gtccttgggc agggccttca
     2701 gcagcaggcg ttcggtgctt tcctgcgaac ccaccagcga gccggtagac gagatctggt
     2761 cggcgaactc gacgaacagg cgctccacga tgttcgagga caccgtgccc agattcgcca
     2821 tgatctgtga caattccttg atttcatcgt cggccatcat gccgaacaat cgggccgaat
     2881 ggtcctcgcc caggctcagc atcatgatgg ccgccttttg cggtccggtc agcgaacggt
     2941 agtcttcctt gattcgggcc atatgtcgcg actctgaacg ctattggcag caggttactc
     3001 gcggcgcccc ggaacgcaag cgcggaaaat cgttcacact cgcatacatt cttgcataca
     3061 atttgaaccc gacctattct ctcgaaattc gttcattgag agcaatcaaa gcgagtatcc
     3121 catgcagaca ggccggacca aacgccgtgg caagaccgag agcggcgatc cccatcccgt
     3181 cgatatccat gtcggcgaga agctccgcct gatgcggacg ttgcgggggt tcagccaaac
     3241 cgaactcgcc aacaaggtgg ggctgacctt ccaacaggt
//
LOCUS       DATIKR010000654         2694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_239723, whole genome shotgun sequence.
ACCESSION   DATIKR010000654 DATIKR010000000
VERSION     DATIKR010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239723"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VLL76_10395"
     CDS             complement(<1..685)
                     /locus_tag="VLL76_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HSV29961.1"
                     /translation="MRLPDPVVVTTIIRETAEAEILPRFRNLKASQIREKKPNQLVTE
                     ADIEAEKVLARRLTELLPSAVVGEESVEHDPEMMSALERPGAVWVIDPVDGTGNFAQG
                     RPRFAVAVALVVDGVTLAGWIHDPVPNRTVIAVKGQGCWRDESERLMLKVAHEVPLAE
                     MTGSVKKKGAVNDAVLHVARRGSAAHDYLDLVTGRLHFAHFKKLMPWDHAAGVLMHAE
                     AGGYGAMMDG"
     gene            complement(682..1950)
                     /gene="hflX"
                     /locus_tag="VLL76_10400"
     CDS             complement(682..1950)
                     /gene="hflX"
                     /locus_tag="VLL76_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HSV29962.1"
                     /translation="MVVHPAMKAGEGTIRMPEGRLEEAVGLAQAIALDIVLAEIVPVG
                     KKRPATLLGKGAVERLAIEVADKEIQVAVVDGHLSPVQQRNLEREWKCKVIDRTGLIL
                     EIFGDRARTREGTLQVELAALSYQRSRLVRSWTHLERQRGGFGFLGGPGETQIEADRR
                     MIGERIVKLKRELEEVKRTRELHRSARRRVPYPIVALVGYTNAGKSTLFNRMTRAEVL
                     AKDMLFATLDPTMRGLKLPSGRNVILSDTVGFVSDLPHELVAAFRATLEEVLEADVIV
                     HVRDVSHTDTDAQAADVEAVLRDLGIAEMVDAGLVEAHNKIDRMDAAGREVAINVAAR
                     RPDTVALSAVTGEGVDTLLATLDRRLASGRQMMDVQMPLADGAGIAWLYRHGEVVARR
                     DDEQVAYMRVRLDPADAQRFHQRQAEGRRN"
     gene            complement(1999..2250)
                     /gene="hfq"
                     /locus_tag="VLL76_10405"
     CDS             complement(1999..2250)
                     /gene="hfq"
                     /locus_tag="VLL76_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HSV29963.1"
                     /translation="MSAEKSQNVQDVFLNYIRKNKTPVTIFLVNGVKLQGIVTWFDNF
                     SVLLRRDGHTQLVYKHAISTVMPSNPIQLFEPNKESGEE"
     gene            complement(2336..>2694)
                     /locus_tag="VLL76_10410"
     CDS             complement(2336..>2694)
                     /locus_tag="VLL76_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HSV29964.1"
                     /translation="VSNKRGGFLRTEADTLGWTPLFGGLVGANDAEADKPHPAPVHLA
                     LSGSGIGPSSDVWFVGDSAIDMHCGLASGCVPVLLRPEPPRPGEFDAHPPVCHLTCCD
                     AIVALVRELSVPISPI"
BASE COUNT          429 a          895 c          901 g          469 t
ORIGIN      
        1 tgccgtccat catggcgccg tagccccccg cctcggcgtg catcagcacc ccggcggcat
       61 ggtcccacgg catcagcttc ttgaaatggg cgaaatgcag ccggccggtg acgaggtcga
      121 ggtaatcgtg ggcggcgctg ccgcgacggg ccacatgcag cacggcgtcg ttgaccgccc
      181 ccttcttctt gaccgagccg gtcatctcgg ccagcggcac ctcgtgggcc accttcagca
      241 tcaggcgctc gctctcgtcc cgccagcacc cctgcccctt caccgcgatg acggtgcggt
      301 tggggacggg atcatggatc cagccggcca gggtgacgcc gtccaccacc agcgccaccg
      361 ccaccgcgaa gcgcggccgg ccctgggcga aattgccggt gccgtccacc ggatcgatca
      421 cccagacggc gccgggccgt tccaaagcgg acatcatttc gggatcgtgt tcgaccgatt
      481 cctcgccgac cacggccgaa ggcagcaatt cggtcaggcg gcgggccagc accttttcgg
      541 cctcgatgtc ggcctcggtg accaactggt tgggcttctt ctcgcggatc tgcgacgcct
      601 tcaggttcct gaaccgaggc aggatctcgg cctcggcggt ctcgcggatg atggtggtga
      661 cgacgaccgg atcgggcagc ctcaattgcg cctcccttcc gcctggcgct ggtggaaccg
      721 ctgggcgtcg gccgggtcga gccggacgcg catataggcc acctgttcgt cgtcgcgtcg
      781 cgccaccact tcgccgtgac ggtacagcca ggcgatgccg gcgccgtcgg ccagcggcat
      841 ctgcacgtcc atcatctggc ggccggaggc gaggcggcgg tccaaggtgg caagcagggt
      901 gtcgaccccc tcgcccgtca ccgccgacag cgccacggtg tcgggccggc gagcggcgac
      961 gttgatggcg acctcgcggc cggccgcatc catgcgatcg atcttgttgt gggcttcgac
     1021 aaggcccgca tccaccatct cggcgatgcc caggtcgcgc agcaccgcct cgacgtcggc
     1081 cgcctgggcg tcggtgtcgg tgtgggacac gtcgcgcacg tgcacgatga cgtcggcctc
     1141 cagcacctcc tcaagggtgg cgcggaaggc ggcgaccagc tcgtgcggca ggtcggacac
     1201 gaagcccacg gtgtcggaca ggatgacgtt gcgccccgac ggcagcttga ggccgcgcat
     1261 ggtggggtcc agcgtcgcga acagcatgtc cttggccagc acttcggcgc gggtcatgcg
     1321 gttgaacagg gtggatttgc cggcgttggt gtagccgacc agggcgacga tgggataggg
     1381 cacgcggcgc cgggccgagc gatgcagttc gcgcgtccgc ttcacctctt ccaactcgcg
     1441 cttcagcttg acgatgcgct cgccgatcat gcggcggtcg gcctcgatct gggtctcgcc
     1501 ggggccgccg aggaagccga agccgccgcg ctggcgctcc aggtgagtcc acgaccgcac
     1561 cagccgcgag cgctggtagg acagggccgc cagctcgacc tgcagggtgc cttcacgggt
     1621 gcgggcgcgg tcgccgaaga tttccaggat caggccggtg cggtcgatga ccttgcactt
     1681 ccattcccgt tccaggttgc gctgctgcac gggcgaaaga tggccatcaa cgaccgccac
     1741 ctggatttcc ttgtcggcga cctcgatggc aaggcgctcg acggcgccct tgcccagcaa
     1801 ggtggccggc cgcttcttgc ccacgggcac gatctcggcc agcacgatgt cgagcgcgat
     1861 ggcctgcgcc aggccgaccg cttcctccag ccgcccttcc ggcatgcgaa tggtgccctc
     1921 ccccgctttc atcgcggggt ggaccaccat ggcgcgctgg gggggcgact gggtccgttc
     1981 ggcctgtccg cttgccactt actcttcgcc gctttccttg ttcggctcga acaactggat
     2041 aggattcgac ggcatcacgg tcgaaatggc gtgcttgtag accagttgag tgtggccgtc
     2101 acggcgcagc agaaccgaga agttgtcgaa ccaggtaacg atgccctgaa gcttgacccc
     2161 gttgaccagg aagatggtaa ccggggtctt gttcttgcgg atgtagttga gaaacacatc
     2221 ctgcacgttt tgggactttt ctgcggacat ggtagtaatc cgttcttatt tgcccgagat
     2281 gcttattggt gggtctttgg agaaaggtcc tcccctaaga cccctttcgt taccatcaaa
     2341 tcggggatat gggaaccgat agttcgcgaa caagagcgac tatcgcatcg caacatgtca
     2401 ggtggcatac cggcgggtgg gcatcgaact cgcccggacg gggaggttcg ggtcgcaaca
     2461 gcaccggaac gcagcccgag gccaggccgc aatgcatgtc gatggccgaa tcgccgacga
     2521 accatacatc ggaagacggg ccgatgccgc tgcccgacag ggccaagtgc accggcgccg
     2581 gatggggctt gtcggcctcg gcgtcgttgg cgccgaccag gccgccgaac agaggcgtcc
     2641 aaccaagggt gtcggcctcg gtgcgcagga agccgccgcg cttgttgctg acca
//
LOCUS       DATIKR010000655         1888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_33505, whole genome shotgun sequence.
ACCESSION   DATIKR010000655 DATIKR010000000
VERSION     DATIKR010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33505"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VLL76_10415"
     CDS             <1..408
                     /locus_tag="VLL76_10415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar acetyltransferase"
                     /protein_id="HSV29965.1"
                     /translation="RQAVFDAWTARGWRFAAIVDPHAIVGPEVDVADGAVVMAGAIVQ
                     PGSRLGANAIVNTGARIDHDCVIGAHVHVAPGATLSGGVTVAAGAHVGTGATVIQGIA
                     IGAGALVAAGAVVVADVAPGVVVTGVPARPRGI"
     gene            411..1478
                     /gene="neuB"
                     /locus_tag="VLL76_10420"
     CDS             411..1478
                     /gene="neuB"
                     /locus_tag="VLL76_10420"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005004893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HSV29966.1"
                     /translation="MAVTIIAEAGVNHNGDVAMALDLVDAAAAAGADAVKFQTFRAEA
                     IISRNAAKADYQKRATDPGESQLDMVRRLELDEAAHRALIRRCADRRIAFLSTPFDPG
                     SVELLARLGLDTLKIPSGEVTNPLLLLAAARSGRKVILSTGMCDLADVERALGVLAFG
                     YLGGERPGRDAFARAFASPEGKAALAAKVTILHCTTEYPAPFADVNLRAMDTLRDAFG
                     LPVGLSDHTPGISVALAAAARGAAIVEKHFTLDRTLPGPDHKASLEPAELAAMVTGIR
                     EVEAALGSGVKAPAPSERANMAIARKCLVALAPVKAGEVFTEANLGAKRADGDISPDC
                     YWDWLGRPANRDYDADQAIRP"
     gene            1522..>1888
                     /locus_tag="VLL76_10425"
     CDS             1522..>1888
                     /locus_tag="VLL76_10425"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV29967.1"
                     /translation="MSASAPLSEAVAIIDKSGAQICLVVDECDRLLGTITDGDVRRAI
                     LRSLPLTTPATAVMNPRPTTVDPGQPREAVLDLMRERRIHQVPMVEADGRVVGLVLLD
                     NLLAAVPTPVPNWVVLMAGG"
BASE COUNT          256 a          699 c          673 g          260 t
ORIGIN      
        1 cgccaggcgg tgttcgacgc ctggaccgcg cgcggctggc gcttcgccgc catcgtcgat
       61 ccccatgcca tcgtcggccc cgaggtggac gtcgccgacg gcgccgtggt gatggcgggc
      121 gccatcgtgc agccgggcag ccgcctgggc gccaacgcca tcgtcaacac cggcgcgcgg
      181 atcgaccatg attgcgtcat cggcgcccac gtccacgtcg cccccggcgc caccctgtcg
      241 ggcggcgtga cggtggcggc gggcgcccat gtcggcaccg gcgcgacggt gatccagggc
      301 atcgccatcg gtgccggcgc cttggtggcg gcgggcgcgg tggtggtggc cgacgtggcg
      361 ccgggcgtcg tggtgacggg cgttcccgcc cgccccaggg ggatttgagc atggccgtga
      421 ccatcatcgc cgaggccggc gtcaaccata acggcgacgt cgccatggcg ctggatctgg
      481 tggacgcggc ggcggcggcc ggcgccgacg ccgtcaagtt ccagaccttc cgcgccgagg
      541 cgatcatcag ccgcaacgcc gccaaggccg attaccagaa gcgcgccacc gatcccggcg
      601 aaagccagct cgacatggtg cgccggctgg agctggacga ggccgcccac cgcgcgctga
      661 tccggcgttg cgccgaccgg cggatcgcct tcctgtccac cccgttcgat cccggcagcg
      721 tcgagctgct ggcgcggctg gggctggaca ccctgaagat cccctcgggc gaggtcacca
      781 acccgctgct gctgctggcc gccgcgcgat cgggccgcaa ggtcatcctg tccaccggca
      841 tgtgcgacct ggccgacgtc gagcgggcgt tgggggtgct ggcgttcggc tacctgggcg
      901 gcgagcgtcc cggccgcgac gccttcgccc gcgccttcgc ctcgcccgag ggcaaggcgg
      961 cgctggccgc caaggtgacc atcctgcact gcaccacgga atatccggcg cccttcgccg
     1021 acgtcaacct gcgcgccatg gacaccctgc gcgacgcctt cggcctgccg gtcgggctgt
     1081 ccgaccacac gcccggcatc agcgtcgccc tggcggcggc ggcgcgcggc gcggccatcg
     1141 tggaaaagca tttcaccctc gaccgcaccc tgcccggacc cgaccacaag gcgtcgctgg
     1201 agccggccga gctggccgcc atggtcacgg gcatccgcga ggtcgaggcg gctctgggct
     1261 ccggcgtcaa ggctccggcg ccgtccgagc gcgccaacat ggccatcgcc cgcaaatgcc
     1321 tggtggcgct ggcacccgtc aaggcgggcg aggtcttcac cgaggccaac ctgggcgcca
     1381 agcgcgccga cggcgacatt tcgcccgatt gctattggga ttggctgggc cgtccggcca
     1441 acagggacta cgatgcagac caggccatcc ggccttgacg gtcaagggga tgctgtgacg
     1501 accaattggc gaaagaccat cgtgagcgcc tcggcgccgc tgtccgaggc ggtggccatc
     1561 atcgacaagt cgggcgccca gatctgcctg gtggtggacg aatgcgaccg cctgctgggc
     1621 accatcaccg acggcgacgt gcgccgcgcc atcctgcgct cgctgccgct gacgaccccg
     1681 gccacggcgg tgatgaatcc gcgcccgacc acggtcgatc ccggccagcc gcgcgaagcg
     1741 gtgctcgacc tgatgcgcga acgccgcatc caccaggtgc cgatggtcga ggccgacggc
     1801 cgcgtggtgg ggctggtgct gctcgacaac ctgctggccg ccgtccccac gccggtgccc
     1861 aactgggtgg tgctgatggc cggcggcc
//
LOCUS       DATIKR010000656         1665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_95134, whole genome shotgun sequence.
ACCESSION   DATIKR010000656 DATIKR010000000
VERSION     DATIKR010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95134"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..501)
                     /gene="dksA"
                     /locus_tag="VLL76_10430"
     CDS             complement(85..501)
                     /gene="dksA"
                     /locus_tag="VLL76_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HSV29968.1"
                     /translation="MTVTLPPDYRPSEDEPFMNDTMKEYFRQKLLDWRAELLRESDET
                     LQHLQEGGLQEPDIADRASAETDRALELRTRDRERKLIAKIDAALERIIDGSYGYCEE
                     TGEPIAIRRLEARPIATLSIEAQERHERMERTHRDD"
     gene            complement(626..1060)
                     /locus_tag="VLL76_10435"
     CDS             complement(626..1060)
                     /locus_tag="VLL76_10435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliX"
                     /protein_id="HSV29969.1"
                     /translation="MKVSGVGSGSSASGAKRVDKSDGKKGEFKKALVEAMDTMEEVHA
                     VETASGIGAVDALLVVQSVGDTTERESRRRLISRGEDILDRLEEIRHGLLLGVVPKEK
                     LVQLAQMVRNKRENCADPRLGALLDEIELRAEVEIAKLSRDA"
     gene            1326..>1665
                     /locus_tag="VLL76_10440"
     CDS             1326..>1665
                     /locus_tag="VLL76_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HSV29970.1"
                     /translation="MNRAATVKASFATGMRAFLLAALLAAGTIAMMPQAAFGASRIKD
                     IADFEGVRDNLLVGYGIVVGLNGTGDSLNNIPFTKESLVGMLERLGVNIRGAGGTIPS
                     LQPKNVAAVMV"
BASE COUNT          267 a          561 c          528 g          309 t
ORIGIN      
        1 ctcctgacct tcaggatagc agagcccgtg ccaacaaaaa gccccgccgt tgccggcggg
       61 gctttgtctg gtcccaggcg gcgatcagtc gtcgcggtgg gtgcgttcca tgcgctcgtg
      121 acgctcttgc gcctcgatcg acagggtggc gatggggcgg gcttccaggc ggcggatggc
      181 gatgggttcg ccggtttcct cgcaatagcc gtaggagccg tcgatgatgc gctcgagcgc
      241 ggcgtcgatc ttggcgatca gcttgcgctc gcggtcgcgg gtgcgcagct ccagggcgcg
      301 gtcggtctcg gccgaggcgc ggtcggcgat gtccggctct tgcagcccgc cttcctgaag
      361 gtgctgaagg gtttcatcgg attcacgcag cagctcggcg cgccagtcca acaatttctg
      421 acggaaatat tccttcatgg tgtcattcat gaagggctcg tcctcggacg ggcgataatc
      481 cggcggcaga gtgacggtca tccagtcccc cgatgcaacg gtcggtccaa attcgcagcg
      541 gaatatatgg ggtgagaggc ttggccgcaa ggggagacgt tcaccttgcg attacatagc
      601 cgggcgggag aattgataag gggtgtcacg cgtcgcgcga caacttggcg atctcgacct
      661 cggcccgcag ctcgatctcg tcgagcaggg cgccaagtcg gggatcggcg cagttttccc
      721 gcttgttgcg caccatctgc gccaactgca ccagcttttc cttgggcacc acgcccagca
      781 gcaagccgtg gcggatttcc tcgagccggt cgaggatgtc ctcgccgcgc gaaatcaggc
      841 gccggcgcga ttcgcgctcg gtggtgtcgc cgaccgattg gacgacaagc agcgcatcca
      901 cggccccgat gccggaggcc gtctcgacgg cgtgcacctc ctccatcgtg tccatggctt
      961 cgacgagggc tttcttgaac tcccccttct tgccgtcgga tttgtcgacg cgcttggccc
     1021 cgcttgcgct ggagccggag ccgacaccgg aaaccttcat gcgaacccga ttcttcggtg
     1081 tgccaatgac ggcgccattc tagcggctgt gcccccgaac gcaaagccgc tattttcctg
     1141 gccttccagc ccgcccggca cccggcagga tttgccgggc aatgggcgaa actgccgggc
     1201 cggcaccgcc cccgagccca cggccggccg gcgcaagtcg ttgatattcc tcaacccccc
     1261 gtctggcacg atgttcgcat cggtcttgcc gcaacgagtg tgacctttgg gacaccgagg
     1321 acgacatgaa ccgagccgcc accgtcaaag cctccttcgc caccggaatg cgggccttcc
     1381 tgctcgccgc cctgctggcc gccggcacca tcgccatgat gccgcaggcc gcgttcggcg
     1441 cgtcgcgcat caaggacatc gccgacttcg aaggcgttcg cgacaacctg ctggtcggct
     1501 acggcatcgt ggtcggcctc aacggcaccg gcgactcgct gaacaacatc ccgttcacca
     1561 aggaatccct ggtcggcatg ctcgagcgcc tcggcgtcaa catccgtggc gccggcggca
     1621 ccatcccctc gctgcagccc aagaacgtgg cggccgtcat ggtca
//
LOCUS       DATIKR010000657         2230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_82998, whole genome shotgun sequence.
ACCESSION   DATIKR010000657 DATIKR010000000
VERSION     DATIKR010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82998"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VLL76_10445"
     CDS             <1..406
                     /locus_tag="VLL76_10445"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HSV29971.1"
                     /translation="ARDEGGKPGATALANPFELGMAMKFAALLAVVILASKLLQKWVG
                     SAGLYLLSAFAGLADVDAIALSMAQMGGRDVALSVAATSITIAAFVNTGVKVGLVGML
                     CGGEMTRRTAYVMAGVIAAGAAGLAARLMGWV"
     gene            complement(530..769)
                     /locus_tag="VLL76_10450"
     CDS             complement(530..769)
                     /locus_tag="VLL76_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSV29972.1"
                     /translation="MQTIFVMMKCELGRSYEVADEAVDIEQVSEVHSISGQYDLMVKC
                     FLEDGHDIGQFVVEKLQMLPGVRDTFTLIAYKAFG"
     gene            complement(791..>2230)
                     /locus_tag="VLL76_10455"
     CDS             complement(791..>2230)
                     /locus_tag="VLL76_10455"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008612979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV29973.1"
                     /translation="EQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIEILAAGRAKARM
                     PRSLILAPTRELAAQVAENFDKYGKYHKLNKALIIGGESMSDQVALLDRGVDVLIATP
                     GRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVERIVAVLPKIRQTLFFSATIS
                     PEIKRLADAFLMNPKAITVSAPSSTATTVEQFLAVVEEIDKRETLRHIIRTENVKNAF
                     IFCNRKRDVDILFRSLSKHHLAAVQWHGDMAQTARNEALAKFKSGEAKLMVCSDVAAR
                     GIDIKGVSHVFNFDVPIHAEDYVHRIGRTGRAGETGRAFSIASPDDGKFVAAIEKLIG
                     KEIPRIEVEGVPALDLDMTARKGRGGKSSGRGKGKDEERPRRKDKEEREERKAERTEE
                     PRREEARREEPRRAEEPRREERRDDRRDRGRKDERGYDRGRRRGRIDELGIGEMTHSD
                     GVIGFGEHVPDFILREVPVFSKSKSADED"
BASE COUNT          325 a          721 c          761 g          423 t
ORIGIN      
        1 ggcccgcgac gagggcggca agcccggcgc caccgcgctt gccaacccgt tcgaactggg
       61 catggcgatg aaattcgccg ccttgctggc ggtcgtcatc ctggcgtcca agctgctgca
      121 gaaatgggtg ggctcggccg gcctttatct gctgtcggcc ttcgccggcc tggccgacgt
      181 ggacgccatc gccttgtcca tggcccagat gggcggccgc gacgtcgccc tgtcggtcgc
      241 cgccacctcc atcaccatcg cggccttcgt caacaccggc gtcaaggtcg gcctggtcgg
      301 catgctgtgc ggcggcgaga tgacccggcg caccgcctat gtcatggccg gcgtcatcgc
      361 cgccggcgcc gccggattgg cggcgcggct gatggggtgg gtgtgagggg cgcgtggcga
      421 gcttcttcgc ctgaaagacc catcggcttc gcctcagggt gacaacacgg acctgtcatc
      481 ctgagcaaag cgaaggatct ttcaccccgg atgacagccg gattgtgcct tacccgaacg
      541 ccttgtaggc gatcagggtg aaggtgtcgc ggacgccggg cagcatctgc agcttttcga
      601 ccacgaactg gccgatgtcg tggccgtctt ccaggaagca cttcaccatc aggtcgtatt
      661 ggcccgagat ggagtggacc tccgacacct gttcgatgtc gacggcctcg tcggcgacct
      721 cgtaggaacg gcccaactcg cacttcatca tgacgaagat ggtctgcatg ctggtcctcc
      781 cggctgggaa tcagtcctcg tcggccgact tgctcttcga aaacaccggc acttcacgca
      841 ggatgaagtc ggggacgtgc tcgccgaagc cgatcacgcc gtcggaatgg gtcatctcgc
      901 cgatgcccaa ttcgtcgatg cggccacggc ggcggccacg gtcgtagccg cgctcgtcct
      961 tgcggccgcg atcgcgacga tcgtcgcggc gctcttcccg gcggggttcc tccgcgcgac
     1021 gcggttcctc gcggcgggct tcttcccggc ggggttcctc ggtgcgttcg gccttgcgct
     1081 cctcgcgctc ttccttgtcc ttgcggcgcg gacgctcctc gtccttgccc ttgccacggc
     1141 cggacgactt gccgccacgg cccttgcgcg ccgtcatgtc gaggtccaag gcggggacgc
     1201 cttcgacttc gatgcggggg atctccttgc cgatcagctt ttcgatggcg gcaacgaact
     1261 tgccgtcgtc ggggctggcg atggagaagg cgcggccggt ctcaccggcg cggccggtgc
     1321 ggccgatgcg gtggacgtaa tcctcggcgt ggatcggcac gtcgaaattg aagacgtggc
     1381 tgacgccctt gatgtcgatg ccgcgcgcgg cgacgtccga gcacaccatc agcttggcct
     1441 cgcccgactt gaacttggcc agggcctcgt tgcgggcggt ctgggccatg tcgccgtgcc
     1501 actgcacggc agccaggtgg tgcttggaca gcgagcggaa caggatgtcc acgtcgcgct
     1561 tgcggttgca gaagatgaac gcgttcttga cgttctcggt gcggatgatg tggcgcaggg
     1621 tctcgcgctt gtcgatttcc tcgaccaccg ccaggaactg ctcgaccgtg gtcgccgtcg
     1681 aggacggcgc cgacacggtg atggctttgg ggttcatcag gaaggcgtcg gccagccgct
     1741 tgatttcggg gctgatggtg gccgagaaga acagggtctg gcggatcttc ggcagcaccg
     1801 cgacgatgcg ctcgacgtcc gggatgaagc ccatgtccag catgcggtcg gcttcgtcga
     1861 tcaccaggac cttgacgtcg ttgagcagga tgcggccgcg ctcgaacatg tccagcaggc
     1921 ggccgggcgt cgcgatcagc acgtcgacgc cgcgatcaag cagggcgacc tggtcgctca
     1981 tggactcgcc gccgatgatc agcgccttgt tgagcttgtg gtacttgccg tacttgtcga
     2041 agttctcggc gacctgggcg gccagttcgc gggtgggggc caggatcaga gagcgcggca
     2101 tgcgcgcctt ggcccggccg gcggccagga tctcgatcat cggcagagtg aacgacgcgg
     2161 tcttaccggt tccggtctga gcgcagccca ggacatcccg ccccatcagt acgacgggga
     2221 tggcttgttc
//
LOCUS       DATIKR010000658         4848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_95151, whole genome shotgun sequence.
ACCESSION   DATIKR010000658 DATIKR010000000
VERSION     DATIKR010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4848
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95151"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..433)
                     /locus_tag="VLL76_10460"
     CDS             complement(<1..433)
                     /locus_tag="VLL76_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HSV29974.1"
                     /translation="MSLFRSIATVGGFTMLSRVTGLAREMMIANYMGAGAIADAFFVA
                     FRFPNLFRSLFAEGAFNAAFVPLFTGKLTAEGEQEARSFAEQALAGMALVLTVFVALM
                     ELIMPWAMIVLAPGFDDVPGKLELTTELSRICFPYLLFISLT"
     gene            complement(566..3325)
                     /locus_tag="VLL76_10465"
     CDS             complement(566..3325)
                     /locus_tag="VLL76_10465"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HSV29975.1"
                     /translation="MTKISDQRTILDRRILIDRLAEVAASDLPKHKRRSQVLATFKDA
                     LTTGRAEVRRRFDEHGHGEQTVRENCFLIDQLIRTVHDFAAEHEFPQGIRTSGEAMSL
                     VAVGGYGRGELSPQSDIDLLFLTPYKRMPWHEQIVEYILYMLWDMGLKVGHATRTADE
                     CVRQGKADLTIRTALLEARWLWGDQNLFFDLQNRFRNEIVAGTTEEFIEAKLAERDTR
                     HGQMGDTRYVLEPNVKEGKGGLRDLHTLYWLAKYLYRVKEVRELVDMGVISRDAANRF
                     VKAQNFLWTVRCHLHYLTGRPEDRLTFDVQPEIARRMNYADRAGSRGVERFMKHFFLV
                     AKDVGDLTRLFCAVAEEQQKRKPKLRLGKLLFLKRSNIAGFTMDGDRLSVASNDQFAK
                     DPVALIRLFHTAMEHDLDIHPRALDLVHRNLKRVDASLRDSPEANRLFIAMLTSRKNP
                     EVALRLMNESGVLGRLVPDFGRVVAQMQYDMYHVYTVDEHTTQAIGILHAIERGELKE
                     EAPVASEVIGKVASRAVLYLAVFLHDIAKGRNGDHSVLGAEVALKLGPRFGLTDAETE
                     TVAWLVREHLTMSRIAFKRDIDDPKTIADFVALVQSPERLRLLLCLTVADIRAVGPSV
                     WNGWKAGLLRELYLRAEEVMLGGMADTRESRVAAAQAALRDELGKAKWPAAEIDAHMA
                     RGYPNYWTTFDTATHLRHARLVREAEAAHAPLTVDSRVDAKRCVTEITVYTGDHPGLF
                     SQIAGAMAVSGANIVDAKIVTLANGMALDTFWIQDSDGGAFDSPPKLAKLSATIEQVL
                     SGRMRLDKELAARRSKLPSRASVFKVPPRVLVDNQASNAHTLIEVNGRDRPGLLYDIT
                     AAMTRVGVQISSAHISTYGERVVDVFYVKDVFGLKINHERKLDQVREELLRAIEDPAA
                     AKAAE"
     gene            3515..4036
                     /gene="def"
                     /locus_tag="VLL76_10470"
     CDS             3515..4036
                     /gene="def"
                     /locus_tag="VLL76_10470"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HSV29976.1"
                     /translation="MALRPILTAPDPRLKQKAAAVGAVDDAIRALMDDMLETMYAAPG
                     IGLAAPQIGIGKRVIVVDIGTDETDRQPIRMANPEIVWVSDDDKSYEEGCLSVPEHYA
                     AVVRPAAIKVRYLDHQNEIREMDADGLLATVLQHEMDHLDGILFIDHLSSLKRNMILR
                     KLLKSKKEAVAVR"
     gene            4033..>4848
                     /gene="fmt"
                     /locus_tag="VLL76_10475"
     CDS             4033..>4848
                     /gene="fmt"
                     /locus_tag="VLL76_10475"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HSV29977.1"
                     /translation="MRLSFMGTPDFSVPILAALIDAGHDVVCVYSQPPRPAGRGHKEQ
                     LTPVHAYAQARGIEVRHPKSLKSAEEQQAFRDLDLDCAVVAAYGLILPKAILEAPRLG
                     CLNVHASLLPRWRGAAPIQRAILAGDAETGVTIMQMDEGLDTGGMLQIETLPITAETT
                     ASSLHDALSEMGARMIVPALEGVASGRLAAVPQPAEGVTYASKLAKDEGRIDWTRPAL
                     ELERQVRGLTPWPGVWCELAGERLKVLAASVTAGNGTPGTVLDDALTVACGDGA"
BASE COUNT          788 a         1593 c         1670 g          797 t
ORIGIN      
        1 aggtcagcga gatgaacagc agatagggaa agcagatgcg cgacagctcg gtggtcagct
       61 cgagcttgcc gggcacgtcg tcgaagcccg gcgccagcac gatcatggcc cagggcatga
      121 tcaattccat cagcgcaacg aacaccgtca gaaccagcgc catgccggcc agggcctgct
      181 cggcgaagct gcgcgcctcc tgctcgccct cggcggtcag cttgccggtg aacagcggca
      241 cgaaggcggc gttgaaggcg ccctcggcga acagcgagcg gaacaggttg gggaagcgga
      301 aggcgacgaa gaaggcgtcg gcgatggccc ccgcgcccat gtaattggcg atcatcatct
      361 cgcgcgccag gccggtgacg cgcgaaagca tggtgaagcc gccgacggtg gcgatggagc
      421 ggaagagcga catggaaccg ggtatagcgc gggaacggtt aattcaccac aaaggcgctg
      481 ccgtgtcatc tgccacggca tcgggcgccc cggcttgtca tgctgagcgc agcgaagcat
      541 ctttcaggca cagcggccgg gcgagttatt ccgccgcctt ggccgccgcc gggtcctcga
      601 tggcgcgcag caactcctcg cgcacctggt cgagcttgcg ctcgtggttg atcttcaggc
      661 cgaacacgtc cttgacgtag aacacgtcca ccacccgctc gccataggtc gagatgtggg
      721 ccgagctgat ctgcacgccg acgcgggtca tggcggcggt gatgtcgtag agcaggccgg
      781 ggcggtcgcg gccgttgacc tcgatcaggg tgtgggcgtt ggaggcctgg ttgtccacca
      841 gcacgcgcgg cggcaccttg aacacgctgg cgcggctggg cagctttgac cggcgcgccg
      901 ccagttcctt gtccagccgc atgcggcccg acagcacctg ctcgatggtg gccgacagct
      961 tggccagctt gggcgggctg tcgaaggcgc cgccgtcgga atcctggatc cagaaggtgt
     1021 cgagcgccat gccgttggcc agcgtcacga tcttggcatc gacgatgttg gcccccgaca
     1081 ccgccatggc gccggcgatc tgcgagaata ggccgggatg atcgccggtg tagacggtga
     1141 tttcggttac gcaacgcttg gcgtcgacgc ggctgtccac cgtgagaggc gcgtgggcgg
     1201 cctcggcctc gcgcaccagg cgggcgtggc gcagatgggt ggcggtgtcg aaggtggtcc
     1261 agtaattggg atagccgcgc gccatgtggg cgtcgatctc ggcggccggc catttggcct
     1321 tgcccagttc gtcgcgcaac gccgcctgcg ccgccgccac ccgcgactcg cgggtatcgg
     1381 ccatgccgcc cagcatcact tcctcggcgc gcaggtacaa ttcgcgcaac aggccggcct
     1441 tccagccgtt ccacacgctg gggccgacgg cgcggatgtc ggccaccgtc aggcacagca
     1501 gcaggcgcag ccgctcgggc gactgcacca gggcgacgaa gtcggcgatg gtcttggggt
     1561 cgtcgatgtc gcgcttgaag gcgatgcggc tcatggtcag gtgctcgcgg accagccagg
     1621 cgaccgtttc ggtctcggcg tcggtcagcc cgaagcgcgg ccccagcttc agcgccacct
     1681 cggcgcccag aaccgaatgg tcgccgttgc ggcccttggc gatgtcgtgc aggaacacgg
     1741 cgagatacag cacggcgcgg ctggcgacct tgccgatgac ttcggaggcg acgggggcct
     1801 cctccttcag ctcgccgcgc tcgatggcgt gcaggatgcc gatggcctgc gtcgtgtgct
     1861 cgtccacggt gtagacgtgg tacatgtcgt attgcatctg cgccacgacc cggccgaaat
     1921 ccggcaccag ccgccccagc acgcccgatt cgttcatcag ccgcagcgcc acttccgggt
     1981 tcttgcggct ggtcagcatg gcgatgaaca ggcggttggc ctcgggcgag tcgcgcaagg
     2041 acgcatccac ccgtttgaga ttgcggtgca ccaggtcgag cgcgcgggga tggatgtcga
     2101 gatcgtgttc catggcggtg tggaacagcc ggatcagcgc caccgggtcc ttggcgaact
     2161 ggtcgttcga cgccaccgac aggcggtcgc cgtccatggt gaagccggcg atgttcgacc
     2221 gcttgaggaa caaaagcttg cccagccgca gcttgggctt gcgcttctgc tgctcctcgg
     2281 cgacggcgca gaacagccgg gtcaggtcgc ccacgtcctt ggcgaccagg aagaagtgct
     2341 tcatgaaacg ctcgacgccg cgcgacccgg cgcggtcggc gtagttcatc cgccgcgcga
     2401 tctcgggctg gacgtcgaag gtcagacggt cctcggggcg cccggtcagg taatgcaggt
     2461 ggcagcgcac cgtccacagg aagttctggg ccttgacgaa acgattggcg gcatcgcgcg
     2521 agatcacccc catgtccacc agctcgcgca cctccttgac ccggtacagg tacttggcga
     2581 gccaatagag ggtgtggagg tccctgaggc cgcccttgcc ttccttgacg ttgggctcca
     2641 gcacatagcg ggtgtcgccc atctggccgt ggcgggtgtc gcgctcggcc agcttggcct
     2701 cgatgaattc ctcggtggtg ccggcgacga tttcattacg gaaacggttt tgcaggtcga
     2761 agaacaggtt ctggtcgccc cacagccagc gcgcttccag cagcgcggtg cggatggtga
     2821 ggtcggcctt gccctggcgc acgcattcgt cggcggtgcg ggtggcgtgg ccgaccttca
     2881 gacccatgtc ccacagcatg tagaggatgt attcgacgat ctgttcgtgc cacggcatgc
     2941 gcttgtaggg cgtcaggaac agcaggtcga tgtccgattg cgggctgagt tcgccacggc
     3001 cgtagccgcc caccgccacc aggctcatgg cctcgcccga ggtgcggatg ccttgcggga
     3061 attcgtgctc ggcggcgaag tcgtggaccg tgcggatcag ctggtcgatc aggaagcagt
     3121 tctcgcgcac ggtctgctcg ccgtggccgt gctcgtcgaa gcggcggcga acctcggcgc
     3181 ggccggtggt cagcgcgtcc ttgaaggtcg ccagcacctg cgaccgacgt ttgtgcttcg
     3241 gcaggtccga cgccgccacc tccgccagcc ggtcgatgag aatgcggcgg tcgaggatgg
     3301 tgcgctggtc actgatcttg gtcatgggaa ggggtaccgg aaacgaggct tgttcaaggg
     3361 attatgggga gcttccgggg tcgccgccac acgtttccgc tttgcacaag atggcggcaa
     3421 tcgctgccca aggatcgggc ggccgccgtt ccgcttgacc tgccggtcat cccgccatat
     3481 ctcacggacg gaatacgatg aaaggcttcc gtccatggcg ctgcgcccca tccttaccgc
     3541 tcccgatccc cggctgaagc agaaggccgc cgccgtcggc gccgtcgacg acgccatccg
     3601 cgccctgatg gacgacatgc tggaaaccat gtacgccgcc cccggcatcg gcctggcggc
     3661 gccgcagatc gggatcggca agcgcgtcat cgtggtggac atcggcaccg acgagaccga
     3721 ccgccagccc atccgcatgg ccaatcccga aatcgtgtgg gtgtcggacg acgacaaatc
     3781 ctacgaggag ggctgcctgt cggtgcccga gcattacgcc gccgtggtgc gccccgccgc
     3841 catcaaggtg cgctatctcg accaccagaa cgagatccgc gagatggacg ccgacggcct
     3901 gctggccacc gtgctgcagc acgagatgga tcatctcgac ggcatcctgt tcatcgacca
     3961 tttgtcgtcg ctgaagcgca acatgatcct gcgcaagctg ctgaagtcga agaaagaggc
     4021 ggtcgccgtc cgatgagact ctccttcatg gggacgccgg acttctcggt ccccatcctc
     4081 gccgccctga tcgatgccgg ccatgacgtg gtgtgcgtct attcccagcc gccgcgcccc
     4141 gccggccgcg gccacaagga acagctgacg ccggtgcacg cctatgccca agcgcgcggc
     4201 atcgaggtgc gccatcccaa gtcgctgaaa tcggccgagg agcagcaggc gttccgcgac
     4261 ctggacctgg attgcgcggt ggtcgccgcc tatggcctga tcctgcccaa ggcgatcctg
     4321 gaggcgccgc gcctgggttg cctcaacgtc catgcctcgc tgctgccgcg ctggcgcggc
     4381 gccgcgccca tccagcgcgc catcctggcc ggcgatgccg agacgggcgt caccatcatg
     4441 cagatggacg agggcctcga caccggcggc atgctgcaga tcgaaaccct gccgatcacc
     4501 gccgaaacca ccgcgtcgag cctgcacgat gccctgtcgg aaatgggcgc gcggatgatt
     4561 gttccggccc tggaaggagt ggcctcgggc cgcctggcgg cggtgccgca accggccgag
     4621 ggcgtgacct atgccagcaa gctggccaag gacgagggcc gcatcgactg gacccgcccg
     4681 gcgttggagc tggaacgcca ggtgcgcggc ctgaccccgt ggcccggcgt gtggtgcgaa
     4741 ctggccggcg agcgcctgaa ggtgctggcc gccagcgtga cggcgggcaa cggcaccccc
     4801 ggcaccgtgc tggacgatgc cctgaccgtg gcttgcggcg acggggcg
//
LOCUS       DATIKR010000659         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_33527, whole genome shotgun sequence.
ACCESSION   DATIKR010000659 DATIKR010000000
VERSION     DATIKR010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33527"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..97)
                     /locus_tag="VLL76_10480"
     CDS             complement(<1..97)
                     /locus_tag="VLL76_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019872348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HSV29978.1"
                     /translation="MKIVSLQSAVAYGHVGNSAAVFPLQRLGFDVW"
     gene            202..1089
                     /locus_tag="VLL76_10485"
     CDS             202..1089
                     /locus_tag="VLL76_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HSV29979.1"
                     /translation="MATVSRPRRSVLYMPGSNARALEKARTLAADALILDLEDAVSPD
                     AKEEARRQVCEAVKAGGYGNRELLVRVNGLGTPWGHADVAAAASCGADAILIPKVESA
                     DAVRQVEAIMAANGAPESMAIWCMMETPRGILKAEEIAQASPRMGGFVMGTSDLAKDL
                     HCLHTRERLPMITSLGICLLAARAYGLAIVDGVYLDLNDDEGFAYSCQQGLELGFDGK
                     TLIHPKTIDAANRVFAPGEKEIEWSKKIIAAHAEAAAEGKGVVVVDGKLIENLHVENA
                     RRIVALSEQIAALQADLAK"
     gene            1287..>1563
                     /locus_tag="VLL76_10490"
     CDS             1287..>1563
                     /locus_tag="VLL76_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29980.1"
                     /translation="MTKTNPGNFFEDFRLGQEIRHATPRTVTEGDVALYTALYGPRFA
                     VNSSAEFAKAIGFPRAPLDDFAAFHVVFGKTVPDVSLNAVANLGYAGG"
BASE COUNT          278 a          547 c          494 g          244 t
ORIGIN      
        1 gccagacgtc gaatcccagc cgctgaagcg ggaacaccgc cgccgagttg ccgacatgac
       61 cgtacgcgac ggccgactgg agcgaaacaa tcttcatgtc cgaccgggtt tatccgaagg
      121 aatgttgcgc tgcaaccttg cttcgcgttt gcacacttgc taggctccgc accctacacc
      181 gaaagggagg taatgaacac catggcgacc gtctctcgtc cccgccgcag cgtgctgtac
      241 atgcccggct cgaacgcgcg ggcgctggaa aaggcccgca ccctggccgc cgacgccctg
      301 atcctcgacc tcgaggacgc cgtgtcgccc gacgccaagg aagaggcccg gcgccaggtg
      361 tgcgaggccg tcaaggccgg cggttatggt aaccgcgagt tgctggtgcg cgtcaacggc
      421 ctgggcaccc cctggggcca tgccgacgtg gccgccgccg cctcgtgcgg cgccgacgcc
      481 atcctgatcc ccaaggtcga aagcgccgac gcggtccgtc aggtcgaggc catcatggcc
      541 gccaacggcg cccccgagtc catggcgatc tggtgcatga tggaaacccc gcgcggcatc
      601 ctgaaggcgg aagagatcgc ccaggccagc ccgcgcatgg gcggcttcgt catgggcacc
      661 tcggacctgg ccaaggacct gcactgcctg cacacccgcg agcgcctgcc gatgatcacc
      721 agtctgggca tctgcctgct ggcggcccgc gcctatggcc tggccatcgt cgacggcgtc
      781 tatctcgacc tcaacgacga cgagggtttc gcctattcct gccagcaggg gctggagctg
      841 ggcttcgacg gcaagaccct gatccacccc aagaccatcg acgccgccaa ccgcgtgttc
      901 gctcccggcg aaaaggagat cgagtggtcg aagaagatca tcgccgccca cgccgaggcc
      961 gccgccgagg gcaagggcgt ggtggtggtg gacggcaagt tgatcgagaa cctgcacgtc
     1021 gagaacgcgc gccgcatcgt ggctttgagc gagcagatcg cggcgctgca agccgatctg
     1081 gcgaagtagg gaattcacca cggagacacg gaggcacgga gacgaaaccc gcatgccgtc
     1141 atgcccggac ttgatccggg catccacaag gcgaagccgt cttcggcagc gtggatcgcc
     1201 gggtcaagcc cggcgatgac gatcaaggga gtgtctccat ctccgtgtct ccgtgcctcc
     1261 gtggttcatt cttaggggcc tcacccatga ccaagaccaa tcccggcaac ttcttcgagg
     1321 atttccgcct cggccaggaa atccgccacg ccaccccgcg caccgtgacc gagggcgacg
     1381 tcgcccttta caccgcgctc tacggcccgc gcttcgccgt caattcctcg gccgagttcg
     1441 ccaaggccat cggcttcccg cgtgcgccgc tggacgactt cgccgccttc cacgtggtgt
     1501 tcggcaagac cgtgcccgac gtgtcgctga acgcggtggc gaacctgggt tatgccggcg
     1561 gcc
//
LOCUS       DATIKR010000660         3481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_167141, whole genome shotgun sequence.
ACCESSION   DATIKR010000660 DATIKR010000000
VERSION     DATIKR010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3481
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167141"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VLL76_10495"
     CDS             <1..412
                     /locus_tag="VLL76_10495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSV29981.1"
                     /translation="HAPSGRAITVEATPLPPVWGDPKLLKLAFNNLIGNAIKYSQPNT
                     PVTVRAWADDDGIWVAVSDYGIGIPETDLPRIFDRFHRAANADGIAGSGIGLHMVRQI
                     VELHGGAITVDSAEGHGSTFTARLRPAPAQGAAK"
     gene            409..1170
                     /locus_tag="VLL76_10500"
     CDS             409..1170
                     /locus_tag="VLL76_10500"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV29982.1"
                     /translation="MRRLLVATVLALSSTSAQSAEIVMAVGRSLPPYVIPGEWKGLEY
                     DVVREALALEGHVVRPRLTTFARLVKELESGLVDAAMTMRRDSGADACYSDTHITYHN
                     VAVTLARRDLRIDSPADLAGKAVLAFQNAGLYLGEAYRTATANNPAYREEAKQSLQPL
                     LLFAQRTDVVVADRFIFGWFAASPEVTNKVDTSQRVRLHAIFPPTDYHVAFHDKALCE
                     SFNRGLKRLKESGGYARITARYTPTLAVEEGGLSR"
     gene            1217..1768
                     /locus_tag="VLL76_10505"
     CDS             1217..1768
                     /locus_tag="VLL76_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SiaB family protein kinase"
                     /protein_id="HSV29983.1"
                     /translation="MLAQCYRSFKRNLDEKGIIFSFSGYMSEGILFSLGDAMRQKMVL
                     EDTDLTTIKKVFSVFVEQAQNIIRYSAEKVQSGDAKAVELSSGMVTIGMEGGRFFIVC
                     ANTVMADDMPRLRDRLERLRGMDKDEIKAYYKEQLREAPEENSRGATIGLIEIARRAS
                     QPIEFDFEAIDAEKSFFVLKVCI"
     gene            1777..2169
                     /locus_tag="VLL76_10510"
     CDS             1777..2169
                     /locus_tag="VLL76_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1987 domain-containing protein"
                     /protein_id="HSV29984.1"
                     /translation="MENLKTAATERSPEVDFDFERGILALKGESYPEDASTVFGPIFS
                     ALERFLDETPLTEIRFRFELIYFNSSSAKALMNMFQSLERAASAGKKIVVDWVFAPDD
                     ETMKEFGEDFSEDLAHVTFNLVATEQVD"
     gene            2170..3216
                     /locus_tag="VLL76_10515"
     CDS             2170..3216
                     /locus_tag="VLL76_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV29985.1"
                     /translation="MTGKAGAFNLFDAEERILEQSEALAGRLADAPADVRDGVAALVE
                     SYRRAIREQRRLVKVSDRLQAQLGTVNQELARRKAEAETALAQLQEAQDHLVQTEKLA
                     SLGALVGGVAHEINTPIGIALSCASHLSDATTAMRKLFEADDIGVDDFERYMATATDT
                     STLILSNCERAASLIRSFKQVAVDRTSAERREFELGAYIRETLAALGPRLRQANLLVS
                     IDCPDDLRVDGYPGALSQVLTNFVMNSVVHGYDEGQSGRIAITVTRPDPDTVRLVYAD
                     DGKGIPEEHRNRIFDPFFTTKRGSGGTGLGLHIVYNLVRASLGGVLSVDSVVGRGTTF
                     TLDFPRVAADDLTP"
     gene            complement(3206..>3481)
                     /gene="trkD"
                     /locus_tag="VLL76_10520"
     CDS             complement(3206..>3481)
                     /gene="trkD"
                     /locus_tag="VLL76_10520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Responsible for the low-affinity transport of
                     potassium into the cell; involved in potassium ion uptake
                     under hyper-osmotic stress at a low pH; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HSV29986.1"
                     /translation="GIHSLYLRYGFLEEADVPGTLVAHGYLKDRRDLMRVSFFVSREN
                     LIPSEDPSLPPWQERLFVLLTNGSLSATDFFCLPPDRVVEMGTLLRV"
BASE COUNT          615 a         1215 c         1109 g          542 t
ORIGIN      
        1 ccacgcgccg tccggccgag ccatcaccgt cgaggcgacg ccgctgccgc cggtatgggg
       61 cgatcccaag ctgctgaagc tggcgttcaa caacctgatc ggcaacgcca tcaaatactc
      121 gcagccgaac accccggtga cggttcgcgc ctgggcggac gacgacggca tctgggtcgc
      181 cgtcagcgat tacggcatcg gcatccccga gaccgacctg ccgcgcatct tcgaccgctt
      241 ccaccgcgcc gccaacgcgg acggcatcgc cggttcgggc atcgggctgc acatggtgcg
      301 ccagatcgtc gaattgcacg gcggcgccat cacggtggac agcgccgagg ggcacggctc
      361 gaccttcacc gcccggctgc gcccggcgcc ggcacaaggc gcggcgaaat gaggcggttg
      421 ctggtcgcca cggtgctggc cctgtcgtcc acgtcggccc agtcggccga gatcgtcatg
      481 gcggtgggcc gctcgctgcc gccctatgtc atccccggcg aatggaaggg cctggaatac
      541 gacgtggtgc gcgaagcgct ggcgctggag ggccacgtgg tgcggccgcg cctgaccacc
      601 ttcgcccggc tggtcaagga actggaatcc gggctggtcg acgccgccat gaccatgcgc
      661 cgcgattccg gcgccgatgc ctgttattcc gacacccaca tcacctatca caacgtcgcc
      721 gtcaccttgg ccaggcgcga cctgcgcatc gactcgccgg ccgacctggc gggcaaggcg
      781 gtgctggcgt tccagaatgc cgggctgtac ctgggcgagg cctaccgcac cgccaccgcc
      841 aacaacccgg cctatcgcga ggaggccaag cagtcgctgc agccgctgct gctgttcgcg
      901 cagcggaccg acgtggtggt ggccgaccgc ttcatcttcg gctggttcgc cgcctccccc
      961 gaggtcacca acaaggtgga caccagccag cgggtgcgtc tgcacgccat cttcccgccc
     1021 accgactacc acgtagcctt ccacgacaag gctttgtgcg agtcgttcaa ccggggtttg
     1081 aagcggctga aggaaagcgg cggctatgcc cgcatcaccg cgcgctacac ccccactctg
     1141 gccgtcgaag agggcggctt gagccgctga cggccggctg ttaacatcat cgccgccagt
     1201 ccaacgggag ccgcagatgc ttgcgcaatg ctaccgatcc ttcaaacgga acctcgacga
     1261 gaaggggatc atcttctcgt tctcggggta catgtccgag ggcattctgt tctcgctggg
     1321 cgacgccatg cgccagaaga tggtgctgga agacaccgac ctgaccacca tcaagaaggt
     1381 gttctcggtg ttcgtcgagc aggcccagaa catcatccgc tattccgccg aaaaggtgca
     1441 aagcggcgac gccaaggcgg tcgagctgtc gtcgggcatg gtcaccatcg gcatggaggg
     1501 cggccgcttc ttcatcgtct gcgccaacac cgtgatggcc gacgacatgc cgcgcctgcg
     1561 cgaccggctg gaacggctgc gcggcatgga caaggacgag atcaaggcct attacaagga
     1621 acagttgcgc gaggcgccgg aggagaacag ccggggcgcc accatcggcc tgatcgagat
     1681 cgcacgccgc gccagtcagc cgatcgagtt cgatttcgag gccatcgacg ccgaaaagtc
     1741 gtttttcgtg ctcaaagttt gtatctgagg ggcgccatgg aaaacctgaa gaccgccgcg
     1801 accgagcgct ctcccgaagt cgatttcgat ttcgagcgcg gcatcctggc gctgaaaggc
     1861 gagtcctatc ccgaggacgc ctcgaccgta ttcgggccga tcttctcggc gctcgaacgc
     1921 ttcctcgacg agacgccgct caccgagatc cgcttccgct tcgagctgat ctacttcaac
     1981 agctccagcg ccaaggcgct gatgaacatg ttccagtcgc tggaacgcgc cgcctccgcc
     2041 ggcaagaaga tcgtggtgga ctgggtgttc gcccccgacg acgagaccat gaaggaattc
     2101 ggcgaggact tctcggaaga cctggcacac gtcaccttca acctggtcgc caccgagcag
     2161 gtcgattaag tgaccggcaa ggccggcgcc ttcaacctgt tcgacgccga ggagcgcatc
     2221 ctcgaacaat ccgaggcgct ggccggccgg ctggccgacg caccggccga cgtgcgggac
     2281 ggcgtcgccg ccctggtcga atcctatcgc cgcgccatcc gcgagcagcg ccggctggtc
     2341 aaggtcagcg accgcctgca ggcccagttg ggcaccgtca accaggagct ggcgcgccgc
     2401 aaggccgagg cggagaccgc cctggcgcag ttgcaggaag cccaggacca tctggtgcag
     2461 accgagaagc tggcgtcgct gggcgccctg gtcggcggcg tcgcccacga gatcaacacc
     2521 cccatcggca tcgccctgtc ctgcgcctcg cacctctccg acgccaccac cgccatgcgc
     2581 aagctgttcg aggccgacga catcggggtg gacgatttcg agcgctacat ggcgaccgcc
     2641 accgacacct cgaccctgat cctgtccaat tgcgaacgcg ccgcctcgct gatccgcagc
     2701 ttcaagcagg tggcggtgga ccgcacctcg gcggaacgtc gcgagttcga gcttggagcg
     2761 tatatccgcg aaaccctggc cgcgctcggg ccgcgcctgc gccaggccaa cctcctcgtc
     2821 agcatcgact gccccgacga cctgcgggtg gacggctatc ccggcgcgct gagccaggtg
     2881 ttgaccaact tcgtgatgaa ttccgtggtg cacggctatg acgagggcca gtccggccgc
     2941 atcgccatca ccgtcacccg gcccgatccc gacacggtgc ggctggtcta cgccgacgac
     3001 ggcaaaggca tccccgagga acaccgcaac cgcatcttcg acccgttctt caccaccaaa
     3061 cgggggtcgg gcggcaccgg gctggggctg cacatcgtct acaatctggt gcgcgcctcg
     3121 ctgggcggcg tgctgtcggt ggacagcgtg gtcgggcgcg gcaccacctt caccctggac
     3181 ttcccccgcg tcgccgccga cgacctcaca ccctgagcag ggttcccatc tcgaccacgc
     3241 ggtccggcgg caggcagaag aagtcggtgg ccgacagcga accgttggtc agcagcacga
     3301 acagccgctc ctgccacggc ggcagcgacg ggtcttccga cgggatcagg ttctcgcgcg
     3361 acacgaagaa gctcactcgc atcaggtcgc ggcggtcctt gaggtagccg tgcgccacca
     3421 gggtgccggg cacgtcggcc tcttccagga agccgtagcg caggtacagg ctgtggatgc
     3481 c
//
LOCUS       DATIKR010000661         4401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_155306, whole genome shotgun sequence.
ACCESSION   DATIKR010000661 DATIKR010000000
VERSION     DATIKR010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4401
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155306"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /gene="elbB"
                     /locus_tag="VLL76_10525"
     CDS             complement(<1..412)
                     /gene="elbB"
                     /locus_tag="VLL76_10525"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009395662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HSV29987.1"
                     /translation="MSKPSFAVVLSGCGVFDGSEIHEAVLTLLAIDRAGGGYQCFAPD
                     IAQRDVVNHLTQQQMAESRNVLVEAARIARGRIKPLSAFDASQFDVLIFPGGFGAAKN
                     LSSFAVDGPDCSVDPEVERAVKAMAAAKKPIGALC"
     gene            533..2029
                     /locus_tag="VLL76_10530"
     CDS             533..2029
                     /locus_tag="VLL76_10530"
                     /EC_number="3.4.17.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HSV29988.1"
                     /translation="MVEQRAYTRLEEIFRKASILGDTLSVLHWDMSTMMPDGGAEARS
                     DQLALLKTMAHELVTAPEIADLLDRAEGEVADEWERANLREMRRDWVHAAAVPADLVE
                     ALAKAESACEMVWREARPKADFKMVLPSLRNVLKLVREAGQAKADKLGVGIYDALLDQ
                     YEPDGRSAEIDAVFADLETFVPGFIGQALEAQARRPAPKLPPGPFPADRQKALGLEMM
                     TTLGFDFTRGRLDTSFHPFCGGYPEDVRITTRYDEADFTSAMMGVMHETGHALYDFGL
                     PGGRWRHQPVGRARGMQVHESQSLLIEMQAGRSREFVSHAAPRMAAAFGASGPEWEAD
                     NLYRLGIRVERGFIRVDADEVTYPAHVIIRYRLEKALVEGAMELDDLPEAWNDGYRRL
                     LGITPPDDRLGCLQDIHWYGGSWGYFPTYTLGAMTAAQLFDAAKTADPAILPAIGNGD
                     FRPLLAWLKTNVHRKGSSLSTRDLLVEATGRPLDAAVFKAHLERRYLA"
     gene            complement(2082..2420)
                     /locus_tag="VLL76_10535"
     CDS             complement(2082..2420)
                     /locus_tag="VLL76_10535"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HSV29989.1"
                     /translation="MTYAPDCGDIVWIDLSPQAGHELRGRQAALVLTPLAFSVATGLA
                     LIVPMTTKAKGSPFEVPMRGARQAKGVVLAHELRTVDYMARNTQKFDTCPPPVLEEVR
                     AIAEALVRPE"
     gene            complement(2417..2662)
                     /locus_tag="VLL76_10540"
     CDS             complement(2417..2662)
                     /locus_tag="VLL76_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005003530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HSV29990.1"
                     /translation="MKAALVPIGNSQGVRIPKAILDQCGLRDEVEMTVEGEALVIRPF
                     KPKKKLSDLLAAFDPGKHRHGADERPWDDAPAGSETL"
     gene            2788..4191
                     /gene="thrC"
                     /locus_tag="VLL76_10545"
     CDS             2788..4191
                     /gene="thrC"
                     /locus_tag="VLL76_10545"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSV29991.1"
                     /translation="MKYVSTRGQAPVLDFDDVLLAGLGRDGGLYLPETWPSFTADEIR
                     AMRGLRYDEIATRVMAPFVAGCMTEAELGEMVRDAYAGFTHPAVAPLKQLGHNQWVLE
                     LFHGPTLAFKDYALQLVGRLFDHVLKKKGQRVVIVGATSGDTGSAAIEACRDREAVDI
                     VILHPKGRTSEVQRRQMTTVMSANVRNLAVEGTFDDCQDIVKALFNDHEFRDSFNLSA
                     VNSINWARVMAQIAYYFAGAVALGAPDVSISFAVPTGNFGNVFAGYCARRMGLPIDRL
                     VVGSNRNDILTRFFEAGVMTADGVVPTLSPSMDIQVSSNFERLIWEYVGREGAAVDKL
                     LTEFRKTGSMHMPQGAFDAMSELFEGFRFDDDATLELMRCLHATTGEVLDPHSAIGVG
                     AGLKAKLKAASPMVALATAHPAKFPDAVEKATGARPPLPPHMADLFERPERLDVIAND
                     VALVRDYVSAFAKGRRA"
     gene            4188..>4401
                     /locus_tag="VLL76_10550"
     CDS             4188..>4401
                     /locus_tag="VLL76_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSV29992.1"
                     /translation="MTIRETRLSNGLRVVTDPMDTVESVSIGVWVDAGTRHEAPEVNG
                     ISHLLEHMAFKGTERRSARDIAEEMDA"
BASE COUNT          708 a         1538 c         1455 g          700 t
ORIGIN      
        1 tgcacagggc gccgatgggc ttcttggccg ccgccatcgc cttgacggcg cgctcgacct
       61 cgggatcgac gctgcaatcg gggccgtcca ccgcgaagga cgacaggttc ttggcggcac
      121 cgaagccgcc ggggaagatc agcacatcga actggctggc gtcgaaggcc gaaagcggct
      181 tgatgcggcc gcgcgcgatg cgggccgctt ccaccagcac gttgcggctt tcggccatct
      241 gctgctgggt caggtggttg accacgtcgc gctgggcaat gtcgggggcg aagcattggt
      301 agccgccgcc ggcacggtcg atggccagca gggtcagcac cgcctcgtgg atctcggacc
      361 cgtcgaacac gccgcaaccg gacagcacaa cggcgaagct tggcttggac atcggacgtc
      421 acccctcgat tgatctaggc gcgcgcgaat catagcccgg aaaaccggtt ttcaccatcc
      481 ggggcggtgg tctatggtcg ccggatgccg cacacatggg gattgtcaga ctatggttga
      541 acagcgcgca tatacccgtc tggaagagat attccgcaag gcgagcatcc tgggcgacac
      601 tttgtcggtg ctgcactggg acatgtccac catgatgccc gacggcggcg ccgaggcgcg
      661 ctcggaccag ttggcgctgc tgaagaccat ggcccacgaa ctggtcaccg cccccgagat
      721 cgccgatctg ctggaccgcg ccgagggcga ggtcgccgac gaatgggaac gcgccaacct
      781 gcgcgagatg cgccgcgact gggtgcatgc cgccgccgtc cccgccgacc tggtcgaggc
      841 cctggccaag gcggaaagcg cctgcgagat ggtgtggcgc gaggcgcggc ccaaggccga
      901 tttcaagatg gtgctgccgt cgttgcgaaa tgtgctgaag ctggtgcgcg aggccggcca
      961 ggccaaggcc gacaagctgg gcgtcggcat ctatgacgcg ctgctggacc agtacgagcc
     1021 cgacggccgc tcggccgaga tcgacgcggt gttcgccgac ctggaaacct tcgtgcccgg
     1081 tttcatcgga caggcgctgg aggcgcaggc ccgccgcccg gcccccaagc tgccgcccgg
     1141 ccccttcccc gccgaccgcc agaaggcgct ggggctggag atgatgacca cgctgggctt
     1201 cgacttcacg cgcggccggc tggacaccag cttccacccc ttctgcggcg gctatcccga
     1261 ggacgtccgc attaccaccc gctacgacga ggccgatttc acctcggcca tgatgggggt
     1321 gatgcacgag accggccacg ccctctacga cttcggcctg cccggcggcc gctggcgcca
     1381 ccagccggtg ggccgggcgc gcggcatgca ggtgcatgaa agccagtcgc tgctgatcga
     1441 gatgcaggcc ggccgctcgc gcgaattcgt gtcccatgcc gcgccgcgca tggcggcggc
     1501 cttcggcgcc tcgggaccgg aatgggaggc cgacaacctc taccgcctgg gcatccgggt
     1561 cgagcgcggc ttcatccggg tggacgccga cgaggtcacc tatcccgccc acgtcatcat
     1621 ccgctatcgc ctggaaaagg cgctggtgga aggcgccatg gaactggacg acctgccgga
     1681 agcgtggaac gacggctacc gccgcctgct cggcatcacc ccgcccgacg accgcttggg
     1741 ctgcctgcag gacatccact ggtacggcgg ctcgtggggc tatttcccca cctacacgct
     1801 gggtgccatg accgccgccc aattgttcga cgccgccaag acggccgacc ccgccatcct
     1861 gcccgccatc ggaaacggcg acttccgccc gctgctggcg tggctgaaga ccaacgtcca
     1921 ccgcaagggc agcagcctgt ccacccgcga cctgttggtg gaagccaccg gccggccgct
     1981 ggacgcggcg gtgttcaagg cgcatctgga gcggcgatat ttggcttaag gccaatactc
     2041 ccacccccgg cgcagccggg ggagggtcgg ggtgggggca attattccgg acgcaccagc
     2101 gcttccgcga tggcgcgtac ctcctccagc accggcggcg ggcaggtgtc gaatttctgg
     2161 gtgttgcgcg ccatgtaatc gaccgtgcgc agctcgtgcg ccagcaccac gcccttggcc
     2221 tggcgggcgc cgcgcatcgg cacctcgaac gggctgccct tggccttggt ggtcatcggc
     2281 acgatcaagg ccagtccggt ggcgacgctg aaggccagcg gcgtcagcac cagcgccgct
     2341 tggcggccgc gcaactcgtg cccagcctgc gggctgaggt cgatccagac gatgtcgccg
     2401 caatcgggcg cgtaggtcac agcgtctcgc ttccggccgg ggcgtcgtcc cacgggcgtt
     2461 cgtcggcccc atggcggtgc ttgccgggat cgaatgccgc caggagatcc gacagcttct
     2521 tcttcggctt gaacggacgg atgaccagtg cctcgccttc gaccgtcatc tcgacctcgt
     2581 cacgcaggcc gcactggtcg aggatggcct tggggatgcg gacaccctgg ctgttgccga
     2641 tggggacgag cgcggctttc atggcggcct ccgtggatgg tgattacaat gtaattactt
     2701 gctgccatgg gagcaagcgc cagccttgcc ccccatgccc tacgccgcta aggtggcgcc
     2761 aaccttggaa ccaagctgga ttgatccgtg aagtacgtca gcacccgggg gcaagcgccc
     2821 gtcctcgatt tcgacgatgt cctgttggcc ggcctgggcc gcgacggcgg gctttacctg
     2881 cccgagacct ggcccagctt caccgccgac gagatccgcg ccatgcgcgg cctgcgctac
     2941 gacgagatcg ccacccgcgt gatggcgccc ttcgtcgccg gctgcatgac cgaggcggaa
     3001 ctgggcgaga tggtgcgcga tgcctatgcc ggcttcaccc accccgccgt ggcgccgctg
     3061 aagcagctcg gccataacca gtgggtgctg gagctgttcc acggcccgac gctggcgttc
     3121 aaggattacg cgctgcaact ggtcggccgc ctgttcgacc acgtgctgaa gaagaagggc
     3181 cagcgcgtcg tcatcgtcgg cgccacctcg ggcgacaccg gctcggccgc catcgaggcc
     3241 tgccgcgacc gcgaggcggt cgacatcgtc atcctgcacc ccaagggccg cacctcggag
     3301 gtgcagcggc ggcagatgac cacggtgatg tcggccaacg tccgcaacct ggcggtcgag
     3361 ggcacgttcg acgactgcca ggacatcgtc aaggcgctgt tcaacgacca cgaattccgc
     3421 gacagcttca acctgtcggc ggtcaattcc atcaactggg cccgcgtcat ggcccagatc
     3481 gcctattact tcgccggtgc cgtcgctttg ggcgcgcccg acgtctcgat cagcttcgcc
     3541 gtgcccaccg gcaatttcgg caacgtcttc gccggctatt gcgcccgccg catgggcctg
     3601 cccatcgacc gcctggtggt cggctcgaac cgcaacgaca tcctgacccg cttcttcgag
     3661 gccggggtga tgacggcgga cggcgtcgtc cccaccttgt ctcccagcat ggacatccag
     3721 gtgtcgtcca acttcgaacg tctgatctgg gaatatgtcg gccgcgaggg cgcggctgtg
     3781 gacaagctgc tgaccgaatt ccgcaagacc ggctccatgc acatgcccca gggcgccttt
     3841 gacgccatga gcgagctgtt cgagggcttc cgcttcgacg acgacgccac gctggagctg
     3901 atgcgctgcc tgcacgccac gaccggcgag gtgctcgacc cccattccgc catcggcgtg
     3961 ggcgccggcc tcaaggccaa gctgaaggcc gccagcccca tggtggcctt ggccaccgcc
     4021 cacccggcca agttccccga cgcggtggaa aaggccaccg gcgcccgccc gccgctgccg
     4081 ccccacatgg ccgatctgtt cgagcggccc gaacggctgg acgtcatcgc caacgacgtg
     4141 gctttggtgc gcgactacgt gtccgccttc gccaaggggc gccgcgcatg acgatccgcg
     4201 agacccggct ttccaacggt cttcgcgtcg tcaccgatcc catggacacg gtcgagagcg
     4261 tctcgatcgg cgtgtgggtc gatgccggca cccgccacga ggcgcccgag gtcaacggca
     4321 tctcgcacct gctcgaacac atggcgttca agggcaccga gcgccgcagc gcccgcgaca
     4381 tcgccgaaga gatggacgcc g
//
LOCUS       DATIKR010000662         1959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_228328, whole genome shotgun sequence.
ACCESSION   DATIKR010000662 DATIKR010000000
VERSION     DATIKR010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228328"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..1029
                     /gene="rpsB"
                     /locus_tag="VLL76_10555"
     CDS             247..1029
                     /gene="rpsB"
                     /locus_tag="VLL76_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HSV29993.1"
                     /translation="MALPSFSMRQLVEAGVHFGHNTRRWNPKMAPYLFGIRNGIHIID
                     LQQTVPMLHAGMNAVRNVVAGNGRVLFVGTKRAASEIVADAAKKCGQYYVNHRWLGGM
                     LTNWKTISQSIKRLRELDEQLASGALAGLTKKEQLVLSREKEKLDRALGGIKDMGGLP
                     DILVIIDTNKESLAVQEANKLGIPVVAILDSNSDPAGIQFPIPGNDDAIRAIQTYCDL
                     MVGSVLDGIQASITRSGGDVGAAAEAPVEVIEAPAEGEAAQA"
     gene            1119..>1959
                     /gene="tsf"
                     /locus_tag="VLL76_10560"
     CDS             1119..>1959
                     /gene="tsf"
                     /locus_tag="VLL76_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HSV29994.1"
                     /translation="MAEITAALVKELREKTGAGMMDCKKALGETAGDLEAAVDWLRKK
                     GLAAAAKKAGRVAAEGLVGVAAAGTKGVAVEVNAETDFVARNDKFQAFVAAAAKVALD
                     GNGTVEALAAAAYPGAGKSVSEELTALIATIGENMNLRRVAKLEVSQGVVANYVHSAI
                     APGLGKIGVLVALESAGDTAKLEALGKQIAMHVAAANPLFLDPSAVDQGALDREKAVL
                     TEQAQASGKPAAVIEKMVEGRIRKYYEEVCLLEQVFVIDQENKISKVVENAAKDVGAP
                     VKLV"
BASE COUNT          359 a          683 c          629 g          288 t
ORIGIN      
        1 gcccaaccat cgccgcccgg tgctgccggc ggcatgcggt ccgctgctga agcagggcga
       61 cgtccacgaa gcgtcggtac gctgacaacg cttgccaaaa cccccgcgag gggttatgta
      121 cccggcgcat caaaccacac gcgggttcgc ggcggcgtgc cgacaacgca ccaccgtcgc
      181 tccggtgtcg ggaattcccg acgacacccg cggaggctca accggagaag taaaggattc
      241 tctgacatgg ctttgccgtc gttctccatg cgtcagctcg tcgaggctgg cgtccacttc
      301 ggtcacaaca cccgccgctg gaacccgaag atggctccgt acctcttcgg catccgtaat
      361 ggcatccaca tcatcgacct gcagcagacc gttccgatgc tgcacgccgg catgaacgcc
      421 gtgcgcaacg tcgtcgccgg caacggccgc gtcctgttcg tcggcaccaa gcgcgccgcg
      481 tccgagatcg tcgccgacgc cgccaagaag tgcggccagt actacgtgaa ccaccgctgg
      541 ctgggcggca tgctgaccaa ctggaagacc atctcccagt cgatcaagcg cctgcgcgag
      601 ctggacgagc agctggcttc cggcgccctg gccggcctga ccaagaagga acagctggtc
      661 ctgtcccgcg agaaggagaa gctggaccgc gctctcggcg gcatcaagga catgggcggc
      721 ctgcccgaca tcctggtgat catcgacacc aacaaggaat cgctggccgt tcaggaagcc
      781 aacaagctgg gcatcccggt cgtcgccatc ctggactcca actcggatcc ggccggcatc
      841 cagttcccga tccccggcaa cgacgacgcc atccgcgcca tccagaccta ttgcgatctg
      901 atggtcggtt cggtgctcga cggcatccag gcgtcgatca cccgctcggg tggtgacgtc
      961 ggcgccgccg ccgaggcccc ggtcgaggtg atcgaggctc cggccgaggg cgaagccgcc
     1021 caggcctaag cctgcacacg ctgttgcgat ggcggcgact ttcgtcgccg ccatttgctt
     1081 aagtaccgtt cggacaagat attcgagagg aagaccccat ggccgagatt accgctgcgc
     1141 ttgtcaagga gctgcgcgaa aagactggcg ccggcatgat ggactgcaag aaggcgctgg
     1201 gcgagaccgc cggcgacctg gaagccgccg tcgattggct gcgcaagaag ggcctggccg
     1261 ccgccgccaa gaaggccggc cgcgtcgccg ccgagggcct ggtcggcgtt gccgccgccg
     1321 gcaccaaggg cgtcgccgtc gaggtgaacg ccgagaccga cttcgtcgcc cgcaacgaca
     1381 agttccaggc tttcgtggcc gccgccgcca aggtcgccct tgacggcaac ggcaccgtcg
     1441 aggctctggc cgccgccgcc tatccgggcg ccggcaagtc ggtgtccgag gagctgaccg
     1501 ccctgatcgc caccatcggc gagaacatga acctgcgccg cgtcgccaag ctggaagtca
     1561 gccagggcgt cgtcgccaac tacgtccact cggccatcgc ccccggcctg ggcaagatcg
     1621 gcgtgctggt cgccctggaa tcggccggcg acaccgccaa gctggaagcc ctgggcaagc
     1681 agatcgccat gcacgtggcc gccgccaacc cgctgttcct cgacccgtcg gccgtcgatc
     1741 agggcgcgct ggaccgcgag aaggccgtgc tgaccgagca ggcccaggct tcgggcaagc
     1801 ccgccgccgt catcgagaag atggtcgaag gccgcatccg caagtactac gaggaagtct
     1861 gcctgctcga gcaggtgttc gtgatcgacc aggagaacaa gatctccaag gtcgtcgaga
     1921 acgccgccaa ggacgtcggc gctccggtca agctggtgg
//
LOCUS       DATIKR010000663         2718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_167153, whole genome shotgun sequence.
ACCESSION   DATIKR010000663 DATIKR010000000
VERSION     DATIKR010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167153"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VLL76_10565"
     CDS             complement(<1..243)
                     /locus_tag="VLL76_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymethylenebutenolidase"
                     /protein_id="HSV29995.1"
                     /translation="MDDDIKSLSAKIDLTRRAFVGTALAATGFAMAAGPARAGAITTD
                     DKGLEAGAVMIPARDRQLPAYAARPKGNAPAPTILVV"
     gene            1006..1209
                     /locus_tag="VLL76_10570"
     CDS             1006..1209
                     /locus_tag="VLL76_10570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29996.1"
                     /translation="MRFLPYILVLAMGAPVFVWFLVSMSLKGSANEFGSGDMTVLVSL
                     GVMMLVAFGLLATWMDKLIRKTN"
     gene            1338..1496
                     /locus_tag="VLL76_10575"
     CDS             1338..1496
                     /locus_tag="VLL76_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29997.1"
                     /translation="MIDNRHPLYLLALSQLSVPEPPRREPRCEPAPAKVPEVPRAPSC
                     APQPAGGQ"
     gene            1630..2091
                     /locus_tag="VLL76_10580"
     CDS             1630..2091
                     /locus_tag="VLL76_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV29998.1"
                     /translation="MNRLTISAALTVLLLGACAAEPEAPQVVAAPAEPVAEAPPPPPA
                     PAPAPEPVAAPAPAPEPAKAEAPAPAPDKRTLVYLASYKTEATAMRGWKILAKASPVL
                     AKQTPVTTKVDLGKKGKFVRLYGMAADEAERASICKQVGKRVDECGARNRE"
     gene            2127..>2718
                     /locus_tag="VLL76_10585"
     CDS             2127..>2718
                     /locus_tag="VLL76_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV29999.1"
                     /translation="MAPPPLLSLRDVRLTFGGNPLFEGVTTWVGRGEKTCLVGRNGSG
                     KSTLLKVLAGQIEPDSGERFVQPGTSVAYLPQDPAMTGASVHDYVALGLPEAERDQLY
                     RVDAMLDAVGIRGDLDPKTLSGGEGRRAALARALVGNPDALLLDEPTNHLDLPTILWL
                     EEWLKAYPGALVVISHDRRFLETISKQTLWLERGVVR"
BASE COUNT          416 a          937 c          892 g          473 t
ORIGIN      
        1 caccaccagg atcgtggggg ccggggcgtt gcccttgggc cgcgccgcat aggccggcaa
       61 ctggcggtcg cgcgccggga tcatcaccgc gccggcctcc aggcccttgt cgtcggtggt
      121 gatggcgccc gcccgcgccg gaccggccgc catggcgaag ccggtcgccg ccagggcggt
      181 gccgacgaag gcgcggcggg tcaggtcgat cttcgcggac aggctcttga tgtcgtcgtc
      241 catggggcgg tcctccaggc ttgccggcga catcctagaa cagccggggg cggttgtcag
      301 gtcaaccgga tggcggggtt tcgggcgcgg cgggctcgtc ctcgtggacg tggaagcaaa
      361 cttggcacca atagaccgcc actccgttga ccatgtggac caagtgtgtc gtcaccgtgc
      421 gacaatgcgg gcatatccgt tcgaccgtca tggcaccgcc catggggaat tttgctgacc
      481 gatggtaaca ggtgccgctt gcccgaccag atatacggag ggggagcgct gctgcgcaat
      541 cgaactatat tgtaaacagg gcgtgaatag cgggcagaca ttcaaaaaaa gcccctcggc
      601 tccttgctga gcggaggggc ttcttccttg tcgccctccc gaggcggaga ggcatggagg
      661 ggccggcggt ccggcctggc ggcttgttgt tcttctcgtt cttcttcttc ttggtgggcc
      721 ggctaggttg ttcttgcctt gttggtgggg gccggccccg gccgcccgat ggtccatcca
      781 tgccccttcg accagggacg tcgtgccggg acatcatcgc cgaatccgcc ctgcgatcaa
      841 tcgggccgga cgacagagac cggtcggcca ggggactgga cttaggtccg gcacggtgcc
      901 cgccggcaaa agttgtactt gtcgcacatc attattgact tggccgccag cctgtgtata
      961 ttcaccacct ctcatatgcg acatattctt attcaaggag cccccatgcg tttcctgccc
     1021 tacatcctgg tgctcgccat gggcgccccg gtcttcgtct ggttcctggt cagcatgtcg
     1081 ctgaagggct cggccaatga attcggcagc ggcgacatga ccgtgctggt gtcgctgggc
     1141 gtgatgatgc tggtcgcgtt cggcctgctg gcgacctgga tggacaagct gatccgcaag
     1201 accaactgag ttgggcaaat ctttcccgcc cggcgcttgc tgcctagtgg cgccggcggg
     1261 aaagtggcgg tatcccttgg gtttcgcctg gcaaggcggt tgcatggctt gacgggagac
     1321 gttccggagc ccgtgccatg atcgacaacc gccacccgct ttacctgctg gccctgtccc
     1381 agctttcggt ccccgaaccg ccccgccgcg agccgcgatg cgaacccgcc ccggccaagg
     1441 tgcccgaggt cccgcgcgct ccctcttgcg cgccgcaacc ggccggcgga caataggccc
     1501 cttgctgcac gtggtcagat ccagacaaaa ggttcatcgg catgaacctt ttgtctggtg
     1561 aatctgccca ccaaccgatg aattgtgcag tgggtcatcc gaatgaccca ctgcactggg
     1621 gggacctgca tgaaccgcct gaccatttcc gccgccctga ccgtcctgct gctgggcgcc
     1681 tgcgccgccg agcccgaggc gccgcaggtc gtcgccgcgc cggccgagcc ggtggccgag
     1741 gcgccgccgc ctccccccgc tcccgctccc gcgcccgagc cggtcgccgc ccctgccccg
     1801 gcacccgagc ctgccaaggc cgaggcgccc gccccggccc ccgacaagcg caccctggtc
     1861 tatctggcgt cgtacaagac cgaagccacc gccatgcgcg gctggaagat cctggccaag
     1921 gcgtcgccgg tgctggccaa gcagacgccc gtcaccacca aggtcgatct gggcaagaag
     1981 ggcaagttcg tgcgcttgta cggcatggcc gccgacgagg ccgagcgcgc atccatctgc
     2041 aagcaggtgg gcaagcgcgt ggacgaatgc ggagcccgta accgcgagta gcttgaaccg
     2101 agtcgcgcgg cggtgtaggt gaaggcatgg ctccgccccc ccttctctcg ctgcgcgacg
     2161 ttcggctcac cttcggcggc aatccgctgt tcgagggcgt gaccacctgg gtcggccgcg
     2221 gcgaaaaaac ctgcctggtc ggccgcaacg gctcgggcaa gtccaccctg ctcaaggtcc
     2281 tggccggcca gatcgagccc gattcgggcg agcgcttcgt ccagcccggc accagcgtcg
     2341 cctatctgcc gcaggacccg gcgatgaccg gggccagcgt gcacgactat gtcgccctgg
     2401 gcctgcccga ggccgagcgc gaccagctct atcgcgtcga tgccatgctg gatgccgtcg
     2461 gcattcgcgg tgacctcgac cccaagacgc tgtccggcgg cgagggccgc cgcgccgccc
     2521 tggcccgggc gctggtcggc aaccccgacg ccctgctgct ggacgagccc accaaccacc
     2581 tcgacctgcc caccatcctg tggctggagg aatggctgaa ggcctatccg ggcgcgctgg
     2641 tggtgatcag ccacgaccgc cgcttcctgg aaaccatctc gaagcagacc ttgtggctgg
     2701 aacgcggcgt ggtgcgcc
//
LOCUS       DATIKR010000664         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191126, whole genome shotgun sequence.
ACCESSION   DATIKR010000664 DATIKR010000000
VERSION     DATIKR010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191126"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1654
                     /gene="hscA"
                     /locus_tag="VLL76_10590"
     CDS             <1..1654
                     /gene="hscA"
                     /locus_tag="VLL76_10590"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HSV30000.1"
                     /translation="VVSSIKRLMGRGLEDVKSLAGTLPYTVEPSPEGGMVRLRVAGRV
                     MTPVEISADILRAVKERVSEATGKPADRAVVTVPAYFDDAARTATKDAARLAGLEVLR
                     LVNEPTAAALAYGLDNSVEGLYAVYDLGGGTFDISVLKMEKGVFQVKATGGDAALGGD
                     DIDHAIAEYFLADRATTLGEQTITAGEAKQALMAGRVAKECLTARAEGEWMIEVDGKS
                     SRHHLSRENLETLAAPFVERTIDICRAVCEDAGIDVADIHGVVLVGGSTRMPLVRKRV
                     AEFFGKQPLADINPDEVVAVGAALQAEALTVGSDTLLLDVTPLSLGIETMGGIVEKVI
                     PRNTPIPVAMAQEFTTYQDGQSAMSIHVVQGEREMVDQCRSLARFVLHGIPPMTAGAA
                     RIRVTFQVDADGLLTVSAQELTTGVEQNVAVKPSYGLDEDEMANMLRDALEHGREDMT
                     QRLFAEAVVEAKRSVLAVRSALKVDSDLLSDDERQAIDAAIERVEQATRGSDRDAVNA
                     SVEELELATKGFAEKRMDRGIRQALAGVSVERLDDALGGGDQ"
     gene            1741..>1851
                     /locus_tag="VLL76_10595"
     CDS             1741..>1851
                     /locus_tag="VLL76_10595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016737833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin"
                     /protein_id="HSV30001.1"
                     /translation="MPKMTFIEPDGSRKEVEAPEGLSVLEIAHRNKIELEG"
BASE COUNT          320 a          636 c          635 g          260 t
ORIGIN      
        1 tgtggtcagc tcgatcaagc gcctgatggg ccgcggcctc gaggacgtca agtcgctggc
       61 cggcacgctg ccctacacgg tcgagccgtc gcccgagggc ggcatggtcc gcctgcgcgt
      121 cgccggccgg gtgatgacgc cggtcgagat ttcggccgac atcctgcgcg ccgtcaagga
      181 gcgggtgtcc gaagccaccg gcaagccggc cgaccgcgcc gtggtcaccg ttcccgccta
      241 tttcgacgac gccgcccgca ccgccaccaa ggatgccgcc cgcctggccg ggctggaggt
      301 gctgcggctg gtcaacgagc cgacggcggc cgccctggcc tatggcctgg acaactcggt
      361 cgagggcctg tacgcggtct acgatttggg cggcggaacc ttcgacatct cggtgctgaa
      421 gatggaaaag ggcgtgttcc aggtcaaagc caccggcggc gacgccgccc tgggcggcga
      481 cgacatcgac cacgccatcg ccgaatactt cctggccgac cgcgccacca ccctgggcga
      541 acagaccatc accgccggcg aggccaagca ggcgctgatg gccggccgcg tcgccaagga
      601 atgcctgacc gcgcgggccg agggcgagtg gatgatcgag gtggacggca agtcgtcgcg
      661 ccaccatctc agccgtgaga acctggaaac cctggcagcg cccttcgtcg agcgcaccat
      721 cgacatctgc cgcgccgtct gcgaggacgc cggcatcgac gtcgccgaca tccacggcgt
      781 ggtgctggtc ggcggctcga cccgcatgcc gctggtgcgc aagcgcgtgg ccgagttctt
      841 cggcaagcag ccgctggccg acatcaaccc cgacgaggtg gtggcggtgg gcgccgccct
      901 gcaggccgag gcgctgacgg tcgggtcgga caccctgctg ctcgacgtca ccccgctgtc
      961 gctcggcatc gagaccatgg gcggcatcgt cgagaaggtg atcccgcgca acaccccgat
     1021 cccggtcgcc atggcgcagg aattcaccac ctatcaggac ggccagtcgg ccatgtccat
     1081 ccacgtggtt cagggcgagc gcgagatggt cgaccagtgc cgcagcctgg cccgcttcgt
     1141 gctgcacggc atcccgccca tgacggcggg cgccgcccgg atccgcgtca ccttccaggt
     1201 ggacgccgac ggcctgctga cggtgtcggc gcaggaactg accaccggcg tggaacagaa
     1261 cgtcgcggtc aagccgtcct atggcctgga cgaggacgaa atggccaaca tgctgcgcga
     1321 cgccctggag cacggccgcg aagacatgac ccagcgactg ttcgccgagg ccgtcgtcga
     1381 ggccaagcga tcggtgctgg cggtgcgatc cgcgctgaaa gtcgattcgg acctcttgtc
     1441 ggatgacgag cgacaggcta tcgatgctgc catcgagcgc gtcgaacagg cgacccgtgg
     1501 ttccgaccgc gatgccgtca acgcctcggt cgaggaattg gagcttgcca ccaagggctt
     1561 cgccgagaag cgcatggatc gcggcatccg ccaggccctc gccggggtca gcgtcgaacg
     1621 gcttgacgac gccctggggg gcggcgatca gtaatcgttg gggtcgaaca ctccccgcgc
     1681 gcgtaccgac gacaccaatc ccgcgcgccg ggaccaaggg aagcaagaaa ggcctttagc
     1741 atgcccaaga tgacgttcat tgagccggac ggcagccgca aggaagtcga ggcccccgag
     1801 ggcctgtccg tgctggagat cgcccaccgc aataagatcg agctggaagg c
//
LOCUS       DATIKR010000665         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83048, whole genome shotgun sequence.
ACCESSION   DATIKR010000665 DATIKR010000000
VERSION     DATIKR010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83048"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1947
                     /locus_tag="VLL76_10600"
     CDS             <1..1947
                     /locus_tag="VLL76_10600"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HSV30002.1"
                     /translation="GGIREIEFFAQTQQLIWGGREPEVRTSRTVDALFALAKAGHVKD
                     EVARDLEVSYRYLRTLEHRLQMVDDKQTQTLPENPDRLAELAAFMGHADIDDFSAVLT
                     GHLQTVEGHYARLFEDSPALGVHGNLVFTGGENDPDTVRTIQEMGFVSADTVCSTIRG
                     WHHGRIRATRSTRARELLTELTPALLSAMATTANPDDAFLRFDEFLTRLPAGVPVFSL
                     FYSNPSLLDLVAEIMGNAPLLAEHLARHANLLDSVLSPAFFEPPPPAEVLEVELDKCF
                     IQAGDDFQEILDISRRWVNDRKFQVGVQTLRNMLTPDAAARAFSDIADAVLTRLAPRV
                     EEEFARAHGRIPGGEWCILAMGKMGGREMTVTSDLDLILIYDAPEDAEESDGPRPLGA
                     TTWFARLTQRIVNAITAKTAEGALYEVDMRLRPSGNSGPIASSFQSFERYQVESAWTW
                     EHMALTRARVVTGDPALSDRVRAVIAGVLTRDRDPDKLVVDVADMRERMAKEHKADTH
                     WEVKHLRGGLVDIEFTAQYLQLRHGRAHPAILKTNTRAALEAAEAAGLLARGDLDSLI
                     EAWRLWSAVQLVLRQTIAGKFDEKTAPQGLKDVLVRAAGLTDFKTLVDRMDDCAREAL
                     DVFRRIVDAPAAQVRPKLTEGQTP"
     gene            1944..2405
                     /locus_tag="VLL76_10605"
     CDS             1944..2405
                     /locus_tag="VLL76_10605"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV30003.1"
                     /translation="MTVTIGQPAPAFAVETDEGPRTLDSYKGKRLVLYFYPKDDTSGC
                     TSEAQQLRDAIDRFKDANTEILGASKDSIASHQKFRAKHALPFALASDTDGTLCAAFD
                     VWKEKSMYGKKYMGIERSTFLIDEAGLVRAVWRKVKVTGHAEDVLKAIAAL"
     gene            2402..3193
                     /locus_tag="VLL76_10610"
     CDS             2402..3193
                     /locus_tag="VLL76_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSV30004.1"
                     /translation="MTTLAQAAIEVLTTADPAEKCRLTRQHAEAWFSGAIRERGDTLP
                     PDRPARPERPELLAPKDMPKRAYGGDRGRIALVHALAHIELNAIDLAWDIVCRFPGDD
                     MPKGFIDDWVQVAVDEAEHFEVLERLLNRWGAAYGDLPAHDGLWQAAEKTADDLLARF
                     TVVPMTLEARGLDTTPATMAKLARNGDTETPPALDVIYHDEIKHVAAGVRWFVHMAEK
                     RGLDPLETFHRIHAERFPGGLKPPFNHEARAEAGFPREWYEALAR"
BASE COUNT          567 a         1179 c         1117 g          519 t
ORIGIN      
        1 ggcggcatcc gcgagatcga gttcttcgcc cagacccagc aattgatctg gggcggccgc
       61 gagccggagg tgcggacctc gcgcacggtg gacgcgctgt tcgcgttggc gaaggccggc
      121 catgtgaagg acgaggtcgc ccgcgacctg gaggtgtcgt accgctacct gcgcacgctg
      181 gagcaccggc tgcagatggt ggacgacaag cagacccaga cgctgcccga aaatcccgac
      241 cgcctggccg agcttgccgc cttcatgggc catgccgaca tcgacgattt ctcggcggtg
      301 ctgaccggcc acctgcaaac cgtcgagggc cattacgccc gcctgttcga ggattccccg
      361 gcgctgggcg tccacggcaa cctggtgttc accggcggtg agaacgaccc cgacaccgtg
      421 cgcaccatcc aggagatggg gttcgtctcg gccgacaccg tgtgttcgac cattcgtggc
      481 tggcaccacg gccgcatccg ggccacccgc tcgacccggg cgcgcgagct gctgaccgag
      541 ctgaccccgg cgctgctgtc ggccatggcg accaccgcca accccgacga cgccttcctg
      601 cgcttcgacg agtttctgac ccggctgccg gcgggcgtgc cggtgttctc gctgttctac
      661 tccaacccgt cgctgctgga tctggtcgcc gagatcatgg gcaacgcgcc gctgctggcc
      721 gagcatctgg cgcgccacgc caacctgctc gacagcgtgc tgtcgcccgc tttcttcgag
      781 ccgccgccgc ccgccgaggt gttggaggtc gaactggaca agtgcttcat ccaggccggc
      841 gacgacttcc aggaaatcct cgacatcagc cgccgctggg tcaacgaccg caagttccag
      901 gtgggcgtcc agacgctgcg caacatgctg acacccgacg ccgccgcgcg cgccttttcg
      961 gacatcgccg acgcggtgct gacccggctg gcgcctcgcg tcgaggaaga gtttgcccgc
     1021 gcccacggcc gcattcccgg cggcgaatgg tgcatcctgg ccatgggcaa gatgggcggc
     1081 cgcgagatga cggtgacgtc cgatctggac ctgatcctga tctacgacgc ccccgaggat
     1141 gccgaggaat ccgacgggcc gcgcccgctg ggcgccacca cttggttcgc ccgcctgacc
     1201 cagcgcatcg tcaacgccat caccgccaag acggcggaag gcgcgctgta cgaggtggac
     1261 atgcgccttc gtccgtcggg caattccggc cccatcgcgt ccagcttcca gtcgttcgag
     1321 cgctatcagg tggaatcggc ctggacgtgg gagcacatgg cgctgacccg cgcccgcgtc
     1381 gtcaccggcg acccggccct gtccgaccgc gtgcgggcgg tgatcgccgg cgtgctgacg
     1441 cgcgatcgcg acccggacaa gctggtggtg gacgtggccg acatgcgcga gcgcatggcc
     1501 aaggagcaca aggccgacac tcactgggag gtcaagcacc tgcgtggcgg cctggtggac
     1561 atcgagttca ccgcccaata cctgcaactg cgccacggcc gcgcccatcc cgccatcctc
     1621 aagaccaaca cccgcgccgc tttggaagcg gccgaggcgg ccggattgct ggcgcgcggc
     1681 gacctggatt cgctgatcga ggcgtggcgg ctgtggtctg ccgtgcaatt ggtgctgcgc
     1741 cagaccatcg ccggcaagtt cgatgagaag acggcgccgc agggactcaa ggacgtgctg
     1801 gtgcgcgccg ccggcctgac cgatttcaag accctggtgg accgcatgga cgactgcgcc
     1861 cgcgaggcgc tggacgtgtt ccgccgcatc gtggatgctc ccgccgccca ggtccgcccg
     1921 aaactgactg aaggacaaac cccatgaccg tgacgatcgg ccagcccgcc cccgcctttg
     1981 ccgtcgagac cgacgaggga ccgcgtaccc tggacagcta caagggcaag cggctggtgc
     2041 tgtatttcta tcccaaggac gacacctcgg gctgcacctc cgaggcgcag caactgcgcg
     2101 acgccatcga ccgcttcaag gatgccaaca ccgagatcct gggcgcctcc aaggacagca
     2161 tcgccagcca ccagaagttc cgcgccaagc atgcgctgcc cttcgcgctg gcctcggaca
     2221 ccgacggcac gctgtgcgcg gccttcgacg tgtggaagga aaagtccatg tacggcaaga
     2281 agtacatggg catcgaacgc tcgaccttcc tgatcgacga ggccggattg gtgcgggcgg
     2341 tgtggcgcaa ggtcaaggtc accggccatg ccgaggatgt gctgaaggcg atcgccgcgc
     2401 tgtgaccacg ctcgcccaag ccgccatcga ggtcctgacc accgccgacc cggccgaaaa
     2461 gtgccgtttg acccgccagc atgccgaggc gtggttcagc ggagcgatcc gcgagcgcgg
     2521 cgacaccttg ccgcccgacc gcccggcccg ccccgagcgg cccgagttgc tggcgcccaa
     2581 ggacatgccc aagcgcgcct atggcggcga ccgcggccgc atcgccttgg tccacgcctt
     2641 ggctcatatc gagttgaacg ccatcgacct ggcctgggac atcgtctgcc gctttccggg
     2701 cgacgacatg cccaagggct tcatcgacga ttgggtccag gtggcggtgg acgaggccga
     2761 gcatttcgag gtgctggagc ggctgttgaa ccggtggggc gccgcctatg gcgacctgcc
     2821 ggcccatgac ggcctgtggc aggcggcgga aaagaccgcc gacgatctgc tggcgcgctt
     2881 caccgtggtg ccgatgacgc tggaggcgcg cggcctcgac accacgccgg ccaccatggc
     2941 gaagctggct cgcaacggcg acaccgagac gccgccggcg ctggacgtca tctaccatga
     3001 cgagatcaag cacgtggcgg cgggggtgcg gtggttcgtg catatggccg agaagcgcgg
     3061 cctggacccg ctggaaacct tccaccgcat ccacgccgaa cgcttccccg gcggcctcaa
     3121 gccccccttc aaccatgaag cccgcgccga ggcgggcttc ccaagggaat ggtacgaggc
     3181 gctggcccgt tagtgcttgt gcggctcagg ctgattcgcc gatccgttac cgctccctct
     3241 tcgtcatccc cgcgaaagcg gggagatgga ctcacatttc aagcgcgaca ccgaggttca
     3301 cgtctatgcc gaggaaagcc tccaggggtg tccggaagtt gaggcaccgc ctgggggtaa
     3361 ggttgtagtc caagatcagg tc
//
LOCUS       DATIKR010000666         2677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_70995, whole genome shotgun sequence.
ACCESSION   DATIKR010000666 DATIKR010000000
VERSION     DATIKR010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70995"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="VLL76_10615"
     CDS             <1..808
                     /locus_tag="VLL76_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HSV30005.1"
                     /translation="NSFVAQYQDGVHVAYQRTGSKLRNTVRIENNVVGATTTFQKMGK
                     GTASTKARHGKVAPMNVDHSSVTCTLYDYYAADWVDKLDLQKIKHDEKTVLQQAGANA
                     LGRKTDELIITELGKSTNYALDGTTGLTKDKVLTAMEMLGDADVPDDGERYAIVGWRQ
                     WSQLLDIPEFKDADYVGADDLPWKARPSEMKRWLGTVWMPHSGLTKAGNIRNCFWYHK
                     TAIGHAIGSDVTSDITWHGDHVAWFINNMMSQGSVLIDGSGVVSLRCLEA"
     gene            820..1089
                     /locus_tag="VLL76_10620"
     CDS             820..1089
                     /locus_tag="VLL76_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30006.1"
                     /translation="MAFIPKDLELLAGGAAICLWGYTTNDTAATVDTEGYFNAASHML
                     KVGDRIHVNADMDGTPAFGLMVVTSNAAGVVDVADLVNLAGTDTD"
     gene            1176..1625
                     /locus_tag="VLL76_10625"
     CDS             1176..1625
                     /locus_tag="VLL76_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019558490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RyR domain-containing protein"
                     /protein_id="HSV30007.1"
                     /translation="MANRVRRFRPNRVTFVTKGAIAPIPSKSEPAMKIIDIARVCHDV
                     NRAYCAAIGDTSQPAWDDAPDWQKQSAIAGVEFTLANPDVGPSASHESWMAEKERDGW
                     KFGPVKDPEKKEHPCFVPYDELPGEQKAKDYLFQGVVRALAPMLTKG"
     gene            1629..2192
                     /locus_tag="VLL76_10630"
     CDS             1629..2192
                     /locus_tag="VLL76_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30008.1"
                     /translation="MLSAIALCSRALLKIGAGTIASFDEGTAESEVAANLYDSTRDAL
                     LSAYPWNFATGQATLPRLAATPVADYDHAYQLPSDFLRAISAGEEAGSGLNYRIAESR
                     LHTNAPAVVLTYVFRPAEEDFPPFFDQALIARLAADFCLPLTESASRADLLYRLAEDE
                     YRKAKLTDAQQDVPSAITHFPLVDVRG"
     gene            2194..>2677
                     /locus_tag="VLL76_10635"
     CDS             2194..>2677
                     /locus_tag="VLL76_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30009.1"
                     /translation="MAKALAQVHSFTSGKLDRLLAGRRDLKAFYSGALEMRNVVPLQL
                     GGFSTRPGLRRVAEIPEAAAGARLARFEQSTEAVYLLVLLHQAVKVFHEDVVVATPPA
                     PWTAAQLPDLDWTQSLDTMILVHPDLEYRKLVRQGNHATWAFSTLALTNIPTHKFDGS
                     T"
BASE COUNT          498 a          950 c          819 g          410 t
ORIGIN      
        1 caattccttc gtcgcgcagt atcaggacgg cgttcacgtc gcctatcagc gcaccggttc
       61 caagctgcgc aacaccgtgc gcatcgagaa caacgtcgtc ggcgccacca ccacgttcca
      121 gaaaatgggc aagggcaccg cctcgaccaa ggcgcgccac ggcaaggtcg cgccgatgaa
      181 cgtcgaccat tccagcgtca cctgcaccct gtacgactat tacgccgccg actgggtcga
      241 caagctggac ctgcagaaga tcaagcacga cgaaaagacc gtgctgcagc aggccggcgc
      301 caatgcgctc ggtcgcaaga ccgacgaact gatcatcacc gaactgggca agtccaccaa
      361 ttacgccctc gacggcacca ccggcctgac caaggacaag gtgctgaccg ccatggagat
      421 gttgggcgat gccgacgtgc ccgacgacgg cgaacgctat gccatcgtcg gctggcgcca
      481 gtggtcccag ctgctggaca tccccgagtt caaggacgcc gactacgtcg gcgccgacga
      541 cctgccgtgg aaggcgcggc cgtcggaaat gaagcgctgg ctgggcacgg tctggatgcc
      601 ccattccggc ctgaccaagg ccggcaacat ccgcaattgc ttctggtacc acaagaccgc
      661 catcggccac gccatcggct cggacgtcac ctcggacatc acctggcacg gcgaccacgt
      721 cgcctggttc atcaacaaca tgatgagcca gggttcggtg ctgatcgatg gatcgggcgt
      781 cgtctcgctg cgctgcctgg aagcctaagg agaaccgaca tggcctttat ccccaaggac
      841 ctggagctgt tggccggcgg cgccgccatc tgcctctggg gctacaccac caacgacacc
      901 gccgccacgg tcgataccga gggctatttc aacgccgcca gccacatgct gaaggtgggc
      961 gaccgcatcc acgtcaacgc cgacatggac ggcaccccgg ccttcggcct gatggtggtc
     1021 acgtcgaacg ccgccggcgt ggtggacgtc gccgacctgg tcaacctggc cggcacggat
     1081 accgattaat ggcgggccgt gaccgcaagc ccccggcgga agccgggggc acccctccca
     1141 aggccccggc ggcgactgcg ccggcggctg aggatttggc gaaccgcgtt cgccgcttcc
     1201 gccccaaccg agtcaccttc gtcaccaagg gcgcaatcgc cccgatcccc agcaagagtg
     1261 agcctgccat gaagatcatc gacatcgcgc gcgtgtgcca tgacgtgaac cgcgcctatt
     1321 gcgccgctat cggcgacacc agtcagccgg cgtgggatga cgccccggac tggcagaagc
     1381 aaagcgccat cgccggcgtc gaattcaccc tcgccaaccc ggatgtgggg cccagcgcca
     1441 gccacgagtc gtggatggcc gaaaaggaac gtgacggctg gaaattcggc ccggtcaagg
     1501 atccggaaaa gaaggaacat ccgtgtttcg tcccgtatga cgaactgccc ggcgagcaga
     1561 aggccaagga ttacctgttc caaggcgtcg tccgcgcctt ggccccgatg ctgaccaagg
     1621 gctaggccat gctgtccgcc atcgcgctgt gttcgcgcgc cctgctgaag atcggcgccg
     1681 gcaccatcgc cagcttcgac gaaggcaccg ccgaatccga ggtggcggcc aacctctatg
     1741 acagcacgcg cgacgcgttg ctgtcggcct atccctggaa tttcgccacc ggccaggcca
     1801 ccctgccccg cctggcggcc acgccggtgg cggattacga ccatgcctac caattgccgt
     1861 ccgacttcct gcgggcgatt tccgccggcg aggaagccgg atccggcctg aactaccgca
     1921 tcgccgaatc ccggctgcac accaacgcgc cggccgtcgt gctgacctat gtgttccggc
     1981 cggcggaaga ggacttcccg cccttcttcg accaggcgct gatcgcgcgt ctggccgccg
     2041 atttctgcct gcccctgacc gaaagcgcca gccgggccga cctgctgtac cgcctggccg
     2101 aggatgaata ccgcaaggcc aagctcaccg acgcgcaaca ggacgtgccg tcggccatca
     2161 cccatttccc gctggtggac gtgaggggct gacatggcca aggcgttggc gcaggtccat
     2221 tcgttcacgt ccggcaagct ggaccggctg ctggccggcc gccgcgacct caaggcgttc
     2281 tattcgggcg cgctggaaat gcgcaacgtg gtgccgctgc aattgggcgg cttctccacc
     2341 cgcccgggcc tgcgtcgggt ggccgagatc cccgaggcgg ccgccggcgc ccgcctggcc
     2401 aggttcgagc aatcgaccga ggcggtctat ctgctggtcc tgctgcacca ggccgtcaag
     2461 gtgttccacg aagacgtggt cgtcgccacc ccgccggcgc cgtggacggc cgcgcaattg
     2521 cccgacctcg actggaccca gtcgctggac accatgatcc tggtccatcc cgatttggag
     2581 taccgcaagc tggtgcgcca gggcaatcac gccacctggg cattctcgac gctggcgctc
     2641 accaacatcc ccacccacaa attcgacggc agcacgg
//
LOCUS       DATIKR010000667         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83098, whole genome shotgun sequence.
ACCESSION   DATIKR010000667 DATIKR010000000
VERSION     DATIKR010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83098"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VLL76_10640"
     CDS             complement(<1..317)
                     /locus_tag="VLL76_10640"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV30010.1"
                     /translation="MDVAGKTILVVEDDGMVLMGLSMILESWGMTVLAAEDMPQVVQK
                     LGDQRPQAILSDLRLRDGVSGFDVVDEVRALVGEKLPAVILSGETAKAEVAEGERRNL
                     TFLT"
     gene            complement(387..1316)
                     /locus_tag="VLL76_10645"
     CDS             complement(387..1316)
                     /locus_tag="VLL76_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV30011.1"
                     /translation="MDLLDCLVVGGGPAGLTAAIYLARYRRRFVVVDGGQARAATIPV
                     SHNCPGWPDGIPGPELLDRMRSQAERYGASLRQGLVIGIRRDGDGFSAMLADGERLWA
                     ATILLATGVVDIEPALPGVEGAIQRGLVRHCPICDGFEASDQNIGVLGFGAAAATEAL
                     FIRNWSDRVTLLTLGHAMDLAEDERIRLDRAGIRVIDQPIARVDVDAGRIAALALDTG
                     RELAFDTLYSALGARVRSELAVGLGAESDGTGCLIVDDHQRCSVPGLYAAGDVVASLN
                     QIPVAMAQAAVAATAIHRARPWPWAHDAPLSHV"
     gene            1479..1898
                     /locus_tag="VLL76_10650"
     CDS             1479..1898
                     /locus_tag="VLL76_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSV30012.1"
                     /translation="MSKTASYRKHHEEIRDIVAKLRPQLTVAQVGSSPEAVAEVVRLL
                     FGKFSIHLALEDNSLYPRCLSHADATVRAAAQRFQSEMGGLGQQFEDYKRAWPGPLAI
                     ARDPAEFIAQTKRVLDLLTARVEMEELHFYSVIDRAA"
BASE COUNT          355 a          681 c          621 g          304 t
ORIGIN      
        1 gtcaggaagg tgaggttgcg gcgttcgcct tcggcgactt cggccttggc ggtctcgccg
       61 ctcaggatca ccgccggcag cttctcgccc accagggcgc gcacctcgtc caccacgtcg
      121 aagccgctga cgccgtcacg caatcgaagg tcggaaagga tggcctgggg ccgctggtcg
      181 cccagcttct gcaccacctg gggcatgtcc tccgccgcca ggacggtcat gccccagctt
      241 tcgagaatca tgctgaggcc catgagcacc atgccgtcgt cctcgacgac gagaatggtc
      301 ttgcctgcaa cgtccatacg gttctcctgg tcgccgcccg accacccatt tgctgcaaga
      361 gtaaacctat tcacaataat tcgtaatcat acatgcgaca gaggcgcatc atgcgcccaa
      421 ggccagggcc gggcacgatg aatggcggtg gcggccaccg ccgcctgggc cattgcgacc
      481 ggaatctggt tgagcgacgc caccacgtcg ccggcggcgt aaaggccggg aaccgagcag
      541 cgctgatggt cgtcgacgat caggcagccg gtgccgtcgc tctcggcccc cagtccgacc
      601 gccagttccg agcgcacccg cgcccccaag gcggaataca gggtgtcgaa cgccagttcc
      661 cgcccggtgt cgagcgccag ggcggcgatg cggccggcat cgacgtccac ccgggcgatg
      721 ggctggtcga tcacgcggat gccggcgcgg tccaggcgga tgcgttcgtc ttcggccaga
      781 tccatggcgt ggcccagggt cagcagcgtg acccggtcgc tccagttgcg gatgaacagc
      841 gcctcggtcg ccgccgccgc gccgaagccg agcacgccga tattctggtc ggacgcctcg
      901 aagccatcgc agatcgggca gtggcgcacc agcccgcgct ggatggcgcc ctcgaccccg
      961 ggcagcgccg gctcgatgtc caccacgccg gtcgccagca ggatcgtggc ggcccacagc
     1021 cgctcgccgt cggccagcat ggcggaaaag ccgtcgccgt cgcggcggat gccgatgacc
     1081 agaccctgcc gtagcgacgc gccatagcgc tcggcctggc tgcgcatgcg gtcgagcaac
     1141 tcgggaccgg ggatgccgtc gggccagccg gggcagttgt gcgacaccgg aatggtcgcg
     1201 gcgcgcgcct ggcccccgtc caccaccacg aagcggcggc ggtagcgggc aaggtagatg
     1261 gccgcggtca ggccggcggg gccgccaccg accacaagac aatccaggag atccatgcaa
     1321 tctgaacaga cggatggcgc agcggttccc cacttggcgc gtcggccttc agatcgccgg
     1381 cttgccaatg attcatctgc aatcggtcat gaccatcgtc aattacccga ctaatttaat
     1441 cacctattaa cacccaacca cgccgttgga ggacgaccat gagcaagact gcatcctacc
     1501 gcaagcacca cgaggagatc cgcgacattg tcgccaagct aagaccccaa ttgaccgtcg
     1561 cccaggtcgg atcgtcaccc gaggcggtcg ccgaggtggt gcgcctattg ttcggcaagt
     1621 tctcgatcca cttggcgttg gaagacaaca gcctgtaccc ccgctgcctg tcccacgccg
     1681 acgcgaccgt gcgcgccgcc gcgcaacgct tccagagtga gatgggcggt cttggccaac
     1741 aattcgagga ttacaagcgc gcctggcccg gtccgctggc catcgcccgc gacccagccg
     1801 aattcatcgc ccagaccaaa agggtgcttg atctgctgac ggcgcgtgtg gagatggagg
     1861 aattgcattt ctacagcgtg atcgatcgcg cggcctaaaa gccgctttcc cggatcagca
     1921 cggcggcaac cacgtcgatc atccgcccca gcacggtgcg g
//
LOCUS       DATIKR010000668         1920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_228363, whole genome shotgun sequence.
ACCESSION   DATIKR010000668 DATIKR010000000
VERSION     DATIKR010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228363"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1252)
                     /locus_tag="VLL76_10655"
     CDS             complement(<1..1252)
                     /locus_tag="VLL76_10655"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HSV30013.1"
                     /translation="MPQTFDLLIKNGTTVTPNGTGKADIGVVGGKIAAIGDLGAASAA
                     ETVDATGLHVLPGVVDSQVHFREPGLEHKEDLSTGTAGAALGGVVAIFEMPNTKPSTT
                     TADAIRDKLKRAEGRAWTDHAFFIGAAADNVDHLAEWERIPGCAGIKIFMGSSTGSLL
                     VADDDTLAKVLAQGYRRIAVHCEDEARLEERKHIAAEGAHPRVHHVWRDAETALRATQ
                     RLVRLAEAAKRRVHVLHVTTAEEMAFLAGHKDLVTVETTPQHLTLAAPECYEELGTYA
                     QMNPPIREAHHREALWRAIADGVVDVLGSDHAPHTRDEKDKPYPQSPSGMTGVQTLVP
                     IMLDHVNAGRLTLERFIDLTSAGPARIYNMAGKGRVALGYDADFTIVDMKAERTITNQ
                     WIASRCGWTPFDGKRVTGWPIATIV"
     gene            complement(1351..1842)
                     /locus_tag="VLL76_10660"
                     /pseudo
     CDS             complement(1351..1842)
                     /locus_tag="VLL76_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383678.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
BASE COUNT          268 a          627 c          700 g          325 t
ORIGIN      
        1 gcacgatggt ggcgatgggc cagccggtga cgcgcttgcc gtcgaacggg gtccagccgc
       61 agcggctggc gatccactgg ttggtgatgg tgcgctcggc cttcatgtcc acgatggtga
      121 agtcggcgtc gtagcccaag gcgacgcggc ccttgccggc catgttgtag atgcgcgccg
      181 gccccgccga ggtcaggtcg atgaagcgtt ccagcgtcag gcggccggca ttgacgtggt
      241 ccagcatgat ggggaccagg gtctgcaccc cggtcatgcc cgacgggctt tgcggatagg
      301 gcttgtcctt ctcgtcgcgg gtgtgcggcg cgtggtccga gcccagcacg tccaccacgc
      361 catcggcgat ggcgcgccac agcgcctcgc ggtgatgcgc ctcgcggatg ggcgggttca
      421 tctgggcata ggtgcccagt tcctcgtagc attcgggggc ggccagggtc aggtgctgcg
      481 gcgtcgtctc caccgtcacc agatccttgt ggccggccag gaacgccatt tcctcggcgg
      541 tggtgacgtg cagcacgtgg acgcggcgct tggcggcctc ggccagtcgg accagacgtt
      601 gggtggcgcg cagcgcggtc tcggcgtcgc gccagacgtg gtggacgcgg ggatgggcgc
      661 cctcggcggc gatgtgcttg cgctcctcca gccgcgcctc gtcctcgcaa tgcacggcga
      721 tgcggcgata gccctgggcc agcaccttgg ccagtgtgtc gtcgtcggcc accagcagcg
      781 agccggtgct cgaccccatg aagatcttga tgccggcaca gccggggatg cgctcccact
      841 cggccaggtg atcgacgttg tcggcggcgg cgccgatgaa gaaggcgtgg tcggtccagg
      901 cccggccctc ggcccgcttc agcttgtcgc ggatggcgtc ggcggtggtg gtgctgggct
      961 tggtgttggg catctcgaaa atggcaacca cgccgcccag ggccgcgccg gcggtgccgg
     1021 tggacaggtc ttccttgtgc tccagccccg gctcgcggaa atgcacctgg ctgtcgacca
     1081 cgcccggcag cacgtgcagg ccggtggcat cgaccgtctc ggccgccgaa gccgcaccca
     1141 aatcgccgat ggcggcaatc ttgccgccca ccacgccgat atcggccttg ccggtgccgt
     1201 tgggggtgac ggtggtgccg ttcttgatga gaaggtcgaa ggtctggggc atggtgttca
     1261 gtcctcgatt tcgtcgccgg gcagcggcgg agtgtccttc accttcgcca tcacccgggc
     1321 gaaggcggtg aaatcggcgc gggcggcgcg ttcgctcagc atctcgaaca catcgccctc
     1381 cgcctgatgc cccatcacat gccgctggtg ccaaagcgca tagaacagca gggtccaggc
     1441 ggcgaagccg gtcttcttgt ccatatgggc gaacaggcgc tcgaccgcat cggggggggc
     1501 gatttcggcg atgccgggct ggcgggcgac cagttggccc acctcgggcc gcgtggcgat
     1561 ccattccgcc accggcacgg tgaagccgcg cttggggctg aacggcttgg cggcgggcag
     1621 ggccttgtcc agccacaggc gcagcagcca cttgcccatc cccttgtgca ccttcaggcg
     1681 gtcgggcagg cgataggcga aggcggccac caccggatcg aggaacggca cgcggccctc
     1741 gatgccgttg gccatcaggc agcgatcggc cttggtcagc aggtcgttgg gcagccagtc
     1801 ggcaacatcc acggcttgcg cgatctgcag gcgggtccgg cctgcacgtg ctgccgggcg
     1861 tggtcgacag ccaggtgcat ttccgcgagc cggggctgga gcacaaggaa gacctgtcca
//
LOCUS       DATIKR010000669         3329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_10266, whole genome shotgun sequence.
ACCESSION   DATIKR010000669 DATIKR010000000
VERSION     DATIKR010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3329
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10266"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VLL76_10665"
     CDS             complement(<1..333)
                     /locus_tag="VLL76_10665"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HSV30014.1"
                     /translation="MMNVIRAKLHGIRVTSADLNYHGSITLDPEQCALAGIYPMEFVE
                     IWNKNSGARISTYVIFGKPGSRCCILNGAAARTCQIGDEVIIAASEYIQGPQDLYTLK
                     PRILTFLPD"
     gene            complement(403..1695)
                     /locus_tag="VLL76_10670"
     CDS             complement(403..1695)
                     /locus_tag="VLL76_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HSV30015.1"
                     /translation="MTVKPPRTEPTGQLPPQDWLSAPETQAVVDALVAEGAEVRFVGG
                     CVRDAILRRPIKDVDIATHDPPERVMELLTKAGIHVIPTGIAHGTVTAVIGKAHYEIT
                     TLREDVETFGRHARVTFTDDWAADAARRDFTMNAMFADRDGRVYDPFNGLADLGAGRV
                     RFVGDPMKRIEEDVLRLLRFFRFFAHYGRPPMDRRAVAACRKMAPKLVTLSGERVAGE
                     LIRLMQAPDPAAVLLVMHGEHILEHVLPEAAEFGRLRVLTWLETRAMRRPGVAPDPMR
                     RLGAVLRTDEAGVRQLGERLKLSNAQAAHIAAIAAPRVAVTADMDPRAVRRALRKVGA
                     DTFRDLVLVAWAGARAQSGRPDSAETRKWMAMLDAAESWVPVELPVRGADCIAMGVPR
                     GPEIGRVLAEVERWWEDEDYRPGREECLERLRRLVAGE"
     gene            complement(1692..2291)
                     /locus_tag="VLL76_10675"
     CDS             complement(1692..2291)
                     /locus_tag="VLL76_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSV30016.1"
                     /translation="MLARAPKPAHRGDAALEALLAGEPAPGTNLLDHEPRPAAVLVPL
                     VERDHGLTVLLTQRTAHLAHHPGQISFPGGRLEDCDQGDAVACALRETEEEIGLSRGF
                     VTIVGRLDQYVTGTGFSVTPVVGLVSPPFELTLDAFEVADVFEVPLDFLVDTGNHRLH
                     RREVAGRARPFWAMTWEERLIWGATAGILVNLSEVLSNP"
     gene            complement(2312..2866)
                     /locus_tag="VLL76_10680"
     CDS             complement(2312..2866)
                     /locus_tag="VLL76_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1285 domain-containing protein"
                     /protein_id="HSV30017.1"
                     /translation="MERDPEDDLLVNPPLPADEALVDDCGNLGIRIDRSGRWFYHGSP
                     IPRKEMVCLFASLMERRDDGSYWLVTPDEKGRIEVDDVPFIAVEMFTCGCGRELVVSF
                     RTNVDECVTVDDEHPLRVVECPETGELLPYVMVRDGLEARLSRPVYYELVAHGFEEKV
                     GEDDLYGLWSSGTFFPLGRLTDPD"
     gene            2998..>3329
                     /locus_tag="VLL76_10685"
     CDS             2998..>3329
                     /locus_tag="VLL76_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV30018.1"
                     /translation="MAEARAVISRVIFGQGRVIDESLITLLAGGHALLIGVPGLAKTR
                     LVQTLGVVLGLDDKRVQFTPDLMPADILGSEVLEETAGGARSFRFIQGPVFCQLLMAD
                     EINRASPRT"
BASE COUNT          510 a         1119 c         1176 g          524 t
ORIGIN      
        1 gtcgggcagg aaggtcagga tgcgcggctt cagcgtgtac aggtcctggg gaccctggat
       61 gtattcgcta gcggcgatga tgacctcgtc gccgatctgg caggtgcggg cggcggcgcc
      121 gttgaggatg cagcagcgcg agcccggctt gccgaagatc acgtaggtcg agatgcgggc
      181 gcccgagttc ttgttccaga tctcgacgaa ttccatggga tagatgccgg ccagggcgca
      241 ctgctcgggg tcgagcgtga tcgagccgtg atagttgagg tccgcgctgg tgacgcggat
      301 gccatgcagc ttggcccgaa tgacgttcat catgggagac gacctggaac ggtgggggac
      361 gcggacttct gcgtagcgcc tgcggtgccg cagtgcaaca gattattcac cggcgaccag
      421 acggcgcagg cgttccaggc attcctcgcg ccccgggcga tagtcctcgt cttcccacca
      481 gcgctcgacc tcggccagca cgcggccgat ttcggggccg cgcggcacgc ccatggcgat
      541 gcaatcggcg ccgcgcaccg gcagttcgac cggcacccag gactcggcgg catccagcat
      601 cgccatccac ttgcgggtct cggcgctgtc cggccgtccc gattgcgccc gcgccccggc
      661 ccatgccacc agcacgaggt cgcggaaggt gtcggccccc accttgcgca gcgcccggcg
      721 cacggcgcgg ggatccatgt cggcggtgac ggcgacccgt ggggcggcga tggcggcgat
      781 gtgggcggcc tgggcgttcg acagcttcag gcgctcgccc aactggcgca cgccggcctc
      841 gtcggtgcgc agcacggcac ccagccgccg catgggatct ggcgccacgc cgggccgccg
      901 catggcgcgg gtctccagcc aggtcagcac gcgcaggcgg ccgaactcgg cggcctcggg
      961 cagcacgtgc tccaggatgt gctcgccgtg catcaccagc agcacggcgg cggggtcggg
     1021 ggcctgcatc agccggatca gctcgcccgc cacccgctcg cccgacagcg tcaccagctt
     1081 gggcgccatc ttgcggcagg ccgccaccgc cctgcggtcc atgggcggac ggccgtaatg
     1141 ggcgaagaag cggaagaagc gcagcaggcg cagcacgtcc tcctcgatgc gcttcatggg
     1201 gtcgccgacg aagcgcaccc gcccggcgcc cagatcggcc aggccgttga acgggtcgta
     1261 cacccggccg tcgcggtcgg cgaacatggc gttcatggtg aagtcgcgcc gcgccgcgtc
     1321 ggccgcccag tcgtcggtga aggtgacgcg ggcatggcgg ccgaaggtct cgacgtcttc
     1381 gcgcagcgtc gtgatctcgt aatgggcctt gccgatgacg gcggtcactg tgccgtgggc
     1441 gatgccggtg gggatgacgt ggatgccggc cttggtcagc aattccatca cccgctcggg
     1501 cggatcgtgg gtggcgatgt ccacgtcctt gatcggccgc ctcaggatgg cgtcgcgcac
     1561 gcagccgccg acgaagcgca cctcggcgcc ctcggccacc agggcgtcga cgacggcctg
     1621 ggtctcgggc gcgctcaacc agtcctgcgg cggcaactgg ccggtcggct cggtgcgggg
     1681 cggtttgacg gtcacgggtt cgacagcact tccgacaggt tgaccaggat gccggcggtg
     1741 gcgccccaga tcagccgttc ctcccaggtc atcgcccaga acggccgcgc ccggcccgcc
     1801 acctcgcggc ggtgcaggcg atggttgccg gtgtcgacca ggaagtccag cggcacttcg
     1861 aacacgtcgg ccacctcgaa ggcgtccagc gtcagctcga agggcggcga caccagcccg
     1921 accaccgggg tgacggaaaa gccggtgccg gtgacgtatt ggtccagccg gccgacgatg
     1981 gtgacgaagc cgcgcgacag gccgatctct tcctcggtct cgcgcagcgc gcaggccacc
     2041 gcgtcgccct ggtcgcaatc ctccagccgg ccgccgggga agctgatctg gccgggatgg
     2101 tgggcaaggt gggcggtgcg ctgggtcagc agcacggtca ggccgtggtc gcgctcgacc
     2161 agcggcacca gcacggcggc gggacggggt tcgtggtcga gcaggttggt gccgggcgcc
     2221 ggctcccccg cgagcaaggc ttcaagcgcg gcgtcgccgc ggtgggcggg cttgggcgcg
     2281 cgcgccagca cgcgcgccac cgcgtcgcgg gtcagtcggg atcggtcagt cgtcccaggg
     2341 gaaagaatgt gccgctgctc catagtccgt acagatcgtc ctcgcccacc ttttcctcga
     2401 agccgtgggc caccagttca tagtacaccg gtcgggacag ccgcgcctcc aatccgtcac
     2461 gaaccatgac gtaaggcagc agctccccgg tttccgggca ttcgaccacg cgcaaggggt
     2521 gctcgtcatc gaccgtcacg cactcgtcca cgttggtgcg gaagctgacc accagctcgc
     2581 ggccgcatcc acaggtgaac atctcgaccg cgatgaaggg gacgtcgtcc acttcgatcc
     2641 ggcccttttc gtcgggcgtg accagccagt acgagccgtc gtcacgccgt tccatcagcg
     2701 aggcgaacag gcagaccatc tctttgcggg gaatcggcga gccgtggtaa aaccatcggc
     2761 cgcttctatc gatgcggatg cccaggttgc cgcaatcgtc gacaagggct tcatcggccg
     2821 gcaggggcgg gttgaccaaa agatcgtcct ccgggtcgcg ttccatgacc agcaaatccg
     2881 tcaagttgga gggtgccttc cgtgaagacc atgtccggga tcgagaccag gggcctgtcg
     2941 gacgcgcgcc ccgacatgga tgacgtagtc cgccgggtag aactcctcaa tgcccgcatg
     3001 gctgaagccc gggcggtgat ctctcgcgtg atcttcggcc aagggcgggt catcgacgaa
     3061 agtcttatca cgctgctggc ggggggtcac gccctgttga tcggcgtgcc cggccttgcc
     3121 aagactcggc tggtccagac gcttggcgtc gtacttgggc tggacgacaa gcgggttcaa
     3181 ttcactcccg atctgatgcc ggccgatatt ctgggttcgg aggtgctgga ggagacggcg
     3241 ggcggcgccc gctcgttccg cttcatccag gggccggtgt tctgccagtt gctgatggcc
     3301 gacgagatca accgcgccag cccgcgcac
//
LOCUS       DATIKR010000670         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_228393, whole genome shotgun sequence.
ACCESSION   DATIKR010000670 DATIKR010000000
VERSION     DATIKR010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228393"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..980)
                     /locus_tag="VLL76_10690"
     CDS             complement(96..980)
                     /locus_tag="VLL76_10690"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HSV30019.1"
                     /translation="MADGNSAPVLGIIGGSGVYDIDGLTNKQWRRVDSPFGQASDELL
                     FGELDGQKLVFLPRHGRGHKIPPSELNFRANIDAMKRAGVTEIVSVSAVGSLKEELPP
                     GTFVIVDQFVDRTFARTKSFFETGLVAHVSMAHPVCGRLGDAIEQAAEEVGIRAVRGG
                     TYLVMEGPQFSTQAESNLYRQWGCDVIGMTNMPEAKLAREAEMCYATVAMVTDYDCWH
                     PDHDAVTVDQVIKVLLANADNARALVKAIAPKLRDRQGACKKGCHTALDHAIITHPDA
                     RDPAVAGKLEAVAGRVLK"
     gene            complement(1098..>1561)
                     /locus_tag="VLL76_10695"
     CDS             complement(1098..>1561)
                     /locus_tag="VLL76_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HSV30020.1"
                     /translation="VLKRPGRASDRYISPFPNDKAAAAANGGALPPDLSLMAKARIGG
                     PNYIYSLMLGYEDTPPEGANIPEGKFYNHYFPGNAISMPPQMMDDLVTYADGTKATKE
                     QIAHDISTFLNWAAEPELNERKSMGAKVLIFLAFFTILLYALKRQIWKDVH"
BASE COUNT          237 a          471 c          564 g          289 t
ORIGIN      
        1 caattcatgc ggcagccggg tctggtcgat gatctcgacg ccccaggaat ccgaggccag
       61 ccagatggtg cgcgtggggg tgccgttgat tttcattact tgagcacccg tccggccacc
      121 gcttccagct tgccggcgac ggcggggtcg cgggcgtcgg ggtgggtgat gatggcgtgg
      181 tcgagtgcgg tgtggcagcc cttcttgcag gcgccctggc ggtcgcgcag cttgggggcg
      241 atggccttga ccagggcgcg ggcgttgtcg gcgttggcca gcagcacctt gatgacctgg
      301 tccaccgtca ccgcgtcgtg gtcggggtgc cagcaatcat agtcggtgac catggcgacg
      361 gtggcgtagc acatctcggc ctcgcgggcc aatttggcct cgggcatgtt ggtcatgccg
      421 atgacgtcgc agccccattg gcggtacagg ttgctctcgg cctgggtgct gaactgcggg
      481 ccttccatca ccaggtaggt gccgccgcgc acggcgcgga tgcccacctc ctcggcggcc
      541 tgctcgatgg cgtcgcccag gcggccgcaa accggatggg ccatggagac gtgggccacc
      601 aggccggtct cgaagaagct cttggtgcgg gcgaaggtgc ggtcgacgaa ctggtcgacg
      661 atgacgaagg tgccgggcgg cagctcttcc ttcaggctgc cgacggccga caccgacacg
      721 atctcggtga cgccggcgcg cttcatggcg tcgatgttgg cgcggaagtt cagctccgac
      781 ggcgggatct tgtggccgcg gccgtggcgc ggcaggaaca ccagcttctg gccgtccagc
      841 tcgccgaaca gcaattcgtc ggacgcctgg ccgaacgggc tgtcgacgcg gcgccattgc
      901 ttgttggtca gcccgtcgat gtcatagacg cccgagccgc cgatgatgcc cagcacggga
      961 gccgaattgc cgtccgccat gtcctgcctc caaaaagcgt ggtgactggg tgttaaaaca
     1021 aaaaggccgc catcgcaagg atggcggcca gtttggtcga tcgaccggac gcgggcggcc
     1081 cggcggaagc ggcgtcctta gtggacgtcc ttccagatct ggcgcttcag ggcgtacagc
     1141 aggatggtga agaaggccag gaagatcagc accttggcac ccatgctctt acgctcgttc
     1201 agctcgggct cggcggccca gttcaggaac gtcgagatgt cgtgggcgat ctgttccttg
     1261 gtggccttgg tgccgtcggc ataggtcacc agatcgtcca tcatctgcgg cggcatgctg
     1321 atggcgttgc cggggaagta gtggttgtag aacttccctt cggggatgtt cgcaccttcc
     1381 ggcggcgtgt cctcgtagcc gagcatcagc gagtagatgt agttcgggcc gccgatgcgg
     1441 gccttggcca tcaacgacag gtccggcggc agggcgccgc cgttggcggc agccgcggcc
     1501 ttgtcgttgg ggaagggcga gatgtaccgg tcggacgcac ggccggggcg cttgagcacc
     1561 a
//
LOCUS       DATIKR010000671         1947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_10294, whole genome shotgun sequence.
ACCESSION   DATIKR010000671 DATIKR010000000
VERSION     DATIKR010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10294"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /locus_tag="VLL76_10700"
     CDS             <1..371
                     /locus_tag="VLL76_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HSV30021.1"
                     /translation="EAIRKATEQAKRNMIKVPLREGRTLHHDVNGHFGAGRVVLRAAP
                     PGTGIIAGGPMRAVFETMGVADVVAKCLGTSNPHNMIKATFAALESLASPRSIAAKRG
                     KKVGDIIGRRDGAAAAASAA"
     gene            386..589
                     /gene="rpmD"
                     /locus_tag="VLL76_10705"
     CDS             386..589
                     /gene="rpmD"
                     /locus_tag="VLL76_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HSV30022.1"
                     /translation="MAAKKATAATKTVRVTQIHSPIGRTADQRGTLIGLGLNKMHRTR
                     ELEDTPSVRGMINKVKHLVRVEE"
     gene            638..1114
                     /gene="rplO"
                     /locus_tag="VLL76_10710"
     CDS             638..1114
                     /gene="rplO"
                     /locus_tag="VLL76_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HSV30023.1"
                     /translation="MTKLNDLRDNPGARYQSKRVGRGIGSGKGKTSGRGVKGQGSRTG
                     VSLHGFEGGQMPIYRRLPKRGFHNPNAKTFEVVNIGRLQVAIDAGKIDASKPITVVEL
                     QAAGVVGKVTDGVRLLARGEIKAKVTIEVSGASAAAIAAVEKAGGSVKLPAVAAEA"
     gene            1278..>1947
                     /locus_tag="VLL76_10715"
     CDS             1278..>1947
                     /locus_tag="VLL76_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA];
                     GO_process: GO:0065002 - intracellular protein
                     transmembrane transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HSV30024.1"
                     /translation="MASAAEQLAANLNFGVLAKATDLKKRIWFTIAALVVYRLGTWIP
                     IPGVNPSVMADLFQQSGGGVLGMFDMLAGGALQRMTIFALNIMPYISASIIIQLMTTV
                     VPSLEAIKKEGELGRKKINQYTRYLTVVIAVFQAWGIAVGLQTMTGTGGPAVMMDNVM
                     LFRLSTVVTLVGGTMFLMWLGEQITARGIGQGTSLIIFAGIVAELPRALVGTLELGRT
                     GALPV"
BASE COUNT          338 a          659 c          638 g          312 t
ORIGIN      
        1 cggaagcgat ccgcaaggcg accgagcagg ccaagcgcaa catgatcaag gtgccgctcc
       61 gcgagggccg caccctgcat cacgacgtca acggtcactt cggtgccggc cgcgtcgtgc
      121 tgcgcgcggc tccgcccggc accggcatca tcgccggcgg cccgatgcgc gccgtgttcg
      181 agaccatggg tgtggccgac gtggttgcca agtgccttgg cacctcgaac ccgcacaaca
      241 tgatcaaggc gaccttcgcc gctctggaga gcctggcctc cccgcgttcg atcgcggcca
      301 agcgtggcaa gaaggtcggc gacatcatcg gtcgtcgcga cggcgctgcc gccgccgcgt
      361 cggccgcgta aggagggttg gaccgatggc tgccaagaag gcgaccgccg ccaccaagac
      421 cgtccgcgtg acgcagatcc acagcccgat cggccgtacc gccgatcagc gcggcaccct
      481 gatcggtctt ggcctgaaca agatgcatcg gacccgcgag ctcgaggata ccccctcggt
      541 tcgtggcatg atcaacaagg tcaagcacct ggtccgcgtc gaggagtagt cgggaccggg
      601 gggaaacccc cgggctccgg ccagaaggaa aaagacaatg acgaagctca acgaccttcg
      661 tgacaacccg ggcgcgcgct accagtccaa gcgcgtcggc cgtggtatcg gttccggcaa
      721 gggcaagacc tcgggccgtg gcgtcaaggg ccagggatcg cgcaccggcg tcagcctgca
      781 cggtttcgaa ggcggtcaga tgcccatcta ccgtcgtctg cccaagcgcg ggttccacaa
      841 cccgaacgcc aagacgttcg aggtggtcaa catcggccgc ctgcaggtgg ccatcgacgc
      901 cggcaagatc gacgcttcca agccgatcac cgttgtcgag ctccaggccg ccggcgtcgt
      961 cggcaaggtg accgacggcg tgcgtctgct ggcgcgcggc gagatcaagg ccaaggtgac
     1021 catcgaggtt tccggcgctt ccgccgcggc gatcgccgcg gtcgaaaagg ccggcggctc
     1081 ggtcaagctg cccgccgtcg ccgccgaggc ctaaggctct cagcacctct tgtgcgcgtg
     1141 gcgccggccg atgacccgca aggtcatggg ttggcgccac gccgcaattg ctttaaaagc
     1201 tggtgttccc gatcggccgt cccgcgaagg cggatcggca acatcagtgt ccaatcgcta
     1261 cagacccgga gaagggcatg gcctctgccg ccgagcagct tgccgcgaac ttgaactttg
     1321 gcgttctggc caaggcgacc gacctcaaga agaggatctg gttcaccatc gcagccttgg
     1381 tcgtctatcg actgggcacc tggattccca tccccggcgt caacccgtcc gtcatggccg
     1441 acctgttcca gcagtcgggc ggcggcgtgt tgggcatgtt cgacatgctg gccggcggtg
     1501 cgcttcagcg tatgaccatc ttcgcgctga acatcatgcc gtacatctcg gcgtcgatca
     1561 tcatccagct catgaccacc gtggtgccct ctctggaggc catcaagaag gaaggcgagc
     1621 tgggccgcaa gaagatcaac cagtacaccc gctatctgac cgtggtcatc gccgtgttcc
     1681 aggcctgggg catcgcggtc ggcctgcaga ccatgacggg caccggcggt ccggcggtga
     1741 tgatggacaa cgtcatgctg ttccggctgt cgacggtggt gacgctggtc ggcggcacca
     1801 tgttcctgat gtggctgggc gagcagatca ccgcccgcgg catcggccag ggcacctcgc
     1861 tgatcatctt cgccggcatc gtcgccgagc tgccgcgtgc cctggtcggc accctggagc
     1921 tgggccgcac cggcgcgctg ccggtcc
//
LOCUS       DATIKR010000672         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_118823, whole genome shotgun sequence.
ACCESSION   DATIKR010000672 DATIKR010000000
VERSION     DATIKR010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118823"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..531
                     /locus_tag="VLL76_10720"
     CDS             28..531
                     /locus_tag="VLL76_10720"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin family protein"
                     /protein_id="HSV30025.1"
                     /translation="MSIAWRDAMDVGEPSIDADHKHLVAMINEFEAAISGRIDHRGVA
                     VILLKLFEYTAEHFTREEEIQLRVRYPYFESHRRSHRDVLKKLTDLVQTYTKAEGAVR
                     DNMIRTMAGFLKEWLVDHIIQSDLRMKPYIARHHAEMVEAEKRKRAAIAQSEHMAGVA
                     PKPQAVR"
     gene            complement(658..1395)
                     /gene="truA"
                     /locus_tag="VLL76_10725"
     CDS             complement(658..1395)
                     /gene="truA"
                     /locus_tag="VLL76_10725"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HSV30026.1"
                     /translation="MPRYKLTIEYDGTPFCGWQRQDNGESVQGVIEQACLRFCQAEVT
                     IVAAGRTDSGVHATGQVIHVDLPKDFAADRVRDGLNHHLKPHPVAVRAAEAVDDDFHA
                     RFSATGRAYLYRIVNRRAPLALDRDRAWRVPVALDCDAMQQAANHLLGHHDFTTFRAS
                     ECQAKSPMKTLDVLQVTRQGDDIAVVTAARSFLHHQVRNMVGTLKLVGEGKWSPDDVR
                     RALEARDRAAGGPTAPAGGLYLTGVRY"
BASE COUNT          276 a          518 c          532 g          249 t
ORIGIN      
        1 ggggaacagt gtccggggga gtgacgcatg tccatagctt ggcgcgatgc gatggacgtt
       61 ggcgagccgt ccatcgatgc cgaccacaag cacttggtcg ccatgatcaa cgagttcgag
      121 gcggccattt ccggccgtat cgaccaccgc ggcgtcgcgg tgatcctgct gaagctgttc
      181 gaatacaccg ccgagcattt cacgcgcgag gaagagatcc agctgcgcgt gcgctatccc
      241 tatttcgaat cccaccgtcg cagccaccgc gacgtgctga agaagttgac cgacctggta
      301 cagacctaca ccaaggccga gggcgccgtg cgcgacaaca tgatccgcac catggcgggc
      361 ttcctcaagg aatggctggt cgaccacatc atccagtccg acctgcgcat gaagccctat
      421 atcgcccgcc accacgccga gatggtcgaa gccgaaaagc gcaagcgtgc cgccatcgcc
      481 caaagcgagc acatggccgg cgtcgccccc aagccccagg cggtccgcta gagtagcgct
      541 caaagccgtc acccccgcga aggcgggggt ccatgtttcg gcgataatcc aatctcgacg
      601 cggaatatgg cgcgctgagg catggattcc cgcctgcgcg ggaatgacga aaaggttcta
      661 ataccgtacg ccggtcaggt acaggccgcc ggccggggcg gtggggccgc cggcggcgcg
      721 gtcgcgcgcc tccagcgccc ggcgcacgtc gtcgggcgac cacttgccct cgcccaccag
      781 cttcagcgtg cccaccatgt tgcggacctg atggtgcagg aacgagcgcg ccgccgtcac
      841 caccgcgatg tcgtcgccct gccgggtgac ctgcaagacg tccagcgtct tcatcgggct
      901 tttggcctgg cattcgctgg cgcggaaggt ggtgaagtcg tggtggccca gcaggtggtt
      961 ggcggcctgc tgcatggcgt cgcaatccag cgccaccggc acccgccagg cgcggtcgcg
     1021 gtccagcgcc agcggggcgc ggcggttgac gatgcggtag agataggcgc ggccggtggc
     1081 cgagaagcgg gcgtggaagt cgtcgtccac cgcctcggcg gcccgcaccg ccaccggatg
     1141 gggcttgagg tggtggttga ggccgtcgcg cacccggtcg gccgcgaagt ccttgggcag
     1201 gtcgacgtgg atgacctggc cggtggcatg caccccggaa tcggtgcggc cggcggcgac
     1261 gatggtcacc tcggcctggc agaagcgcag gcaggcctgc tcgatcaccc cttgcaccga
     1321 ctcgccgttg tcctggcgct gccagccgca gaacggcgtg ccgtcatatt cgatggtgag
     1381 cttgtagcgg ggcatgcgaa ccgtctgaga agacacggat gaacacagat aaacacggat
     1441 gatcggcggg gcgaagccca tccgggttca tccgtgtcca tccgtgtcct aattaagaac
     1501 gctgcccttc ggcaccgcaa agccgcgcag catctcggcg gcggtcatcg gggccttgcc
     1561 ggcgcgctgg acatt
//
LOCUS       DATIKR010000673         3219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83179, whole genome shotgun sequence.
ACCESSION   DATIKR010000673 DATIKR010000000
VERSION     DATIKR010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83179"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VLL76_10730"
     CDS             <1..256
                     /locus_tag="VLL76_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30027.1"
                     /translation="ARLAGLPPQVVARAEEVLSALEKGEQGSAVAKLADDLPLFAALA
                     TPKPKAAEVSAVEQKLKDVSVDDLTPRQALEVLYALKGLL"
     gene            complement(497..1630)
                     /gene="rmuC"
                     /locus_tag="VLL76_10735"
     CDS             complement(497..1630)
                     /gene="rmuC"
                     /locus_tag="VLL76_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HSV30028.1"
                     /translation="MDASVVMMGLALVVVLALAGFMVLRAQGDRPRAEALTRAVETVA
                     QAQGALTGRLAQLAESQAAAQAQLAERMQAQERALSKAVEERLAELAKRMDDGMQAQS
                     HRQATTLHDLRERLAVIDAAQKNITELSAQVVGLQDILSNKQARGAFGEIQLADLVKG
                     VLPPFAYEFQAAIGDGRRVDCLLKLPNPPGAIAVDAKFPLESYHLLRNAKDDAERVAA
                     GRAFGTAILKHVRDISEKYIVPGETAESALMFLPSEAIYAELHANFPDVVEKSFRAKV
                     WIVSPTTLMATLNTVRAVLKDARMREQAGVIQKEVRSLLDDVGRLDDRVAALDKHFGQ
                     AAEDIRQIRISTDKVVKRADKIEAVQLGETEVVAEVAAPKALV"
     gene            1710..3041
                     /locus_tag="VLL76_10740"
     CDS             1710..3041
                     /locus_tag="VLL76_10740"
                     /inference="COORDINATES: protein motif:HMM:NF024985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4139 domain-containing protein"
                     /protein_id="HSV30029.1"
                     /translation="MSRHLLPLAVVLMPLLAQAQTVSTPADRLGLQLTVTQGDLATVR
                     DRRSISLDKGALDLTIEGVAREARIGTATLVAPGVSVREQGFVADTLAADTLLARSLG
                     REVAVVWRDGDKEERAKVLAAGPVPVFQIGNRVVAGQPARLLFDALPTGLGALPSWRA
                     AIASEAAGKREAELTYLTGGLSWQADYAAELGDDKLTLSAWATIMNQSGADYPAAQLR
                     VVAGNANQAPGLRRDAKVMMAAMAEPAREAAGIHHLYTIPQPVTLLAGESRQVALLPP
                     AQVAVEKVLVLDPQPPHVWRSPWGEPDVRHPQQQLRFRNNLGKPLPAGIVRVMAQGVL
                     QGEDRLAATPDGAPARLTLGEALDLTARRSQTDFQRVAPEISEAAWEVRLANGGDKPA
                     KVQVREAFGGEWLVIDESDKHLRDGAQGAAWTVSVPAKGETVLKYRVRVKG"
BASE COUNT          476 a         1106 c         1138 g          499 t
ORIGIN      
        1 cgcccgcctg gccggcctgc cgccccaggt cgttgcgcgc gcggaagagg tgctgtcggc
       61 gctggaaaag ggcgagcagg gcagcgccgt ggccaagctg gccgacgacc tgccgctgtt
      121 cgcggccctg gccacgccca agcccaaggc ggccgaggtg tcggccgtcg agcagaagct
      181 gaaggacgtc agcgtcgacg acctgacccc gcgccaggcg ctggaggtgt tgtacgcgtt
      241 gaaggggctg ctttaacggg gtgagaaagc gcgcgcggcc cgcctcggct cgacggcctg
      301 cgcatggtca agcaacactg agaaccgtct tctttccggg tgcctgccgc tctacaccat
      361 cgtcatggcc gggcctgacc cggccatcca cgcctctccg cctagttttg cttcgacgca
      421 gacttcgcgg ctgccacgtg gatcgccggg tcgagcccgg cgatgacggg aagcgggcag
      481 gcagcaaaag cggcagtcaa accagcgcct tgggcgccgc cacttcggcc accacctcgg
      541 tctcgcccaa ctgcaccgcc tcgatcttgt cggcacgctt gaccaccttg tcggtggaaa
      601 tgcggatctg gcggatgtcc tcggcggcct ggccgaaatg cttgtccagc gcggcgacgc
      661 ggtcgtcgag gcggccaacg tcgtcgagca gcgagcgcac ctccttttgg atcaccccgg
      721 cctgctcgcg catgcgggcg tccttgagca cggcccgcac ggtgttgagc gtcgccatca
      781 gggtggtggg cgacacgatc cacaccttgg cgcggaagct cttttccacc acgtcgggga
      841 aattggcgtg cagctcggcg tagatggcct ccgacggaag gaacatcagc gccgattcgg
      901 cggtctcgcc ggggacgatg tatttctcgg aaatgtcgcg cacgtgcttg aggatggcgg
      961 tgccgaatgc gcggccggcg gcgacgcgct cggcatcgtc cttggcgttg cgcagcaggt
     1021 gataggattc cagcgggaat ttggcgtcca ccgcgatggc gccgggcggg ttgggcaact
     1081 tcagcaggca atcgacccgg cggccgtcgc cgatggcggc ctggaactcg taggcgaagg
     1141 gcggcagcac gcccttgacc agatcggcca actggatctc gccgaaggcg ccgcgcgcct
     1201 gcttgttgga caggatgtcc tgcaatccca ccacctgggc cgacagctcg gtgatgttct
     1261 tctgcgccgc gtcgatcacg gcgaggcgct cgcgcaaatc atgcagggtg gtggcctggc
     1321 ggtgggattg ggcctgcatg ccgtcgtcca tgcgcttggc cagctcggcc aggcgttcct
     1381 cgaccgcctt ggacagcgcc cgttcctgcg cctgcatgcg ttccgccagt tgcgcctgtg
     1441 cggcggcctg gctttcggca agctgggcga ggcggccggt cagggcgcct tgcgcctgcg
     1501 ccaccgtctc gaccgcgcgg gtcagggcct cggcgcgtgg gcggtcgccc tgggcccgca
     1561 gcaccatgaa gccggccagg gccagcacca ccaccagggc gaggcccatc atcaccaccg
     1621 acgcgtccac gctttccccc ttcgatgcca tggatccgcc ggattcatag catagacagg
     1681 ggatggttcg cacacccgga gaccttgcca tgagccggca ccttcttccc ctggccgtcg
     1741 tcctgatgcc gctgctggcg caggcccaga ccgtttccac cccggccgac cggctggggc
     1801 tgcaactgac cgtgacccag ggggacctgg ccaccgtgcg cgaccgccgc agcatcagcc
     1861 tggacaaggg cgcgctggac ctgaccatcg agggcgtggc gcgcgaggcc cgcatcggca
     1921 ccgccacgct ggtggcgccg ggcgtcagcg tgcgcgagca gggcttcgtg gccgacaccc
     1981 tggccgccga caccctgctg gcgcgctcgc tgggccgcga ggtcgcggtg gtgtggcgcg
     2041 acggcgacaa ggaggagcgc gccaaggtgc tggccgcagg ccccgtgccg gtgtttcaga
     2101 tcggcaaccg ggtggtggcg ggccagccgg cgcgcctgct gttcgacgcg ctgccgaccg
     2161 gcctgggcgc cctgccgtcg tggcgcgccg ccatcgcctc ggaagccgcc ggcaagcgcg
     2221 aggccgagct gacctatctg accggcggcc tgagctggca ggccgattat gccgccgagc
     2281 tgggcgacga caagctgacg ctgtcggcct gggccaccat catgaaccag tcgggcgccg
     2341 attaccccgc cgcccagttg cgggtggtgg cgggcaatgc caaccaggcg cccgggctgc
     2401 gccgcgacgc caaggtgatg atggcggcca tggccgagcc ggcgcgcgag gctgccggca
     2461 tccaccattt gtatacaatc cctcagcccg tcaccctgct ggccggtgaa agccgccagg
     2521 tggcgctgtt gccgcccgcc caggtggcgg tggaaaaggt gctggtgctc gacccgcagc
     2581 cgccgcatgt ctggcgcagc ccctggggcg agccggatgt ccgccatccg cagcagcaat
     2641 tgcgcttcag gaacaatctc ggcaagccgc tgccggcggg aatcgtgcga gtgatggcgc
     2701 aaggcgtgct gcagggcgag gaccgcctgg ccgccacccc cgacggcgcc cccgcccgcc
     2761 tgaccctggg cgaggcgctc gacctcacgg cacggcgcag ccagaccgat ttccagcgcg
     2821 tcgcccccga aatcagcgag gcggcgtggg aggtgcggct ggccaatggc ggcgacaagc
     2881 cggccaaggt gcaggtgcgc gaggcgttcg gcggcgaatg gctggtgatc gacgaaagcg
     2941 acaagcacct gcgcgacggc gcccagggcg cggcctggac ggtgtccgtg ccggccaagg
     3001 gcgagaccgt gctgaaatac cgggtgcggg tgaagggtta aaatctgcgc atgtctgcag
     3061 gggctgttgg tggggattac cacctaatac ggccgtcatg cgcggacttg atccactgct
     3121 gtccggttta gatttttcat gaagtgcagc ttcgctgcct gcccccttcc cgtcatcgcc
     3181 gggcttgccc cggcgatcca cgtgagagcc gcgatctcc
//
LOCUS       DATIKR010000674         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47080, whole genome shotgun sequence.
ACCESSION   DATIKR010000674 DATIKR010000000
VERSION     DATIKR010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47080"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VLL76_10745"
     CDS             complement(<1..285)
                     /locus_tag="VLL76_10745"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541620.1"
                     /note="with component II, the glutamine amidotransferase,
                     catalyzes the formation of anthranilate from chorismate
                     and glutamine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HSV30030.1"
                     /translation="MTAHPDFAAFRATYEAGRPQVVWRTMVADLETPVSAFLKLANST
                     PHSFLLESVEGGAVRGRYSVLGMKPDLIWKCVGNEAWINRAPRTAPDAFEP"
     gene            complement(289..>1532)
                     /locus_tag="VLL76_10750"
     CDS             complement(289..>1532)
                     /locus_tag="VLL76_10750"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSV30031.1"
                     /translation="AELEQWYKERAQSFMAPEYRALTVMLMRPADVAAEVEVTEQMIA
                     DAYQQRGDEFHTPERRTVSQVVLPDQASADKAAEMVANGRDLAAIAKELGQQVIDLGA
                     IERADLPEELGQAVFQQAKGSVAAPVRTALGWHVAKVSQVTPERTRPLAEVKGALEAD
                     LRRDLATEKLSELASKVEDALGGGASVEETAKRFNLPLVKVPAIDAKGMSPNGKPAAD
                     APRTEAFLDVAFHTDQGTESQLTENENDGYFLLRVDQVTPPQPKPFADIKAQVLAAWQ
                     AERRHELAGQRATNIAEQIKKGDSVNKAALNFGLATTTTQPFTRDGVEASKLPPAVTA
                     ELFAAQPGGVAVGATQNGWVVARLASVVPFDPAANAAVTAEAGRRVADGISGDLIDQY
                     IAALHADFGVKVDRSQLAREE"
BASE COUNT          197 a          500 c          569 g          266 t
ORIGIN      
        1 gggctcgaag gcgtcgggag cggtgcgtgg cgcgcggttg atccaggcct cgttgccgac
       61 gcacttccag atcagatcgg gcttcatgcc cagcaccgaa tagcggccgc gcacggcgcc
      121 gccttcgacc gattccagca ggaaagagtg cggcgtcgaa ttcgccagct tgaggaaggc
      181 cgagaccggc gtttccagat cggccaccat ggtgcgccac accacctggg gcctgcccgc
      241 ttcataggtg gcgcggaagg cggcgaaatc cgggtgggcg gtcatggctt attcttcgcg
      301 ggcgagttgg ctgcggtcaa ccttgacgcc gaaatcggca tgcagggcgg cgatgtactg
      361 gtcgatcagg tcgccgctga tgccgtcggc gacgcggcgg ccggcctcgg ctgtgacggc
      421 ggcgttggcg gccgggtcga acggcaccac gctggcgagg cgggcgacca cccatccgtt
      481 ctgggtcgcg ccgacggcga cgccacccgg ctgggccgcg aacaattcgg cggtgaccgc
      541 cggcggcagc ttggacgcct cgacgccgtc gcgggtgaag ggctgggtgg tggtggtggc
      601 gaggccgaaa ttcagcgccg ccttgttgac cgaatcgccc ttcttgatct gctcggcgat
      661 gttggtggcg cgctggccgg ccagctcatg gcggcgttcg gcctgccagg cggccagcac
      721 ctgggccttg atgtcggcga acggcttggg ctggggcggc gtgacctggt cgacgcgcag
      781 caggaaatag ccgtcgttct cgttctcggt gagctggctc tcggtgccct ggtcggtgtg
      841 gaaggcaacg tccaggaacg cctcggtgcg cggagcgtcg gcggcgggct tgccgttggg
      901 agacatgccc ttggcgtcga tggccggcac cttgaccagc ggcaggttga agcgcttggc
      961 ggtctcctcg accgacgcgc cgccacccag ggcgtcctcg accttgctgg ccagctcgga
     1021 cagcttctcg gtcgccaggt cgcggcgcag gtcggcttcc agggcaccct tgacctcggc
     1081 cagcgggcgg gtgcgctcgg gggtgacttg gctcaccttg gcgacgtgcc agcccagcgc
     1141 cgtgcgcacc ggggcggcaa cgctgccctt ggcctgctgg aacaccgcct ggcccagttc
     1201 ctcgggcaaa tcggcgcgtt cgatggcgcc caggtcgatg acctgctggc ccagttcctt
     1261 ggcgatggcg gccaggtcgc ggccattggc gaccatctct gcagccttgt cggcgcttgc
     1321 ctggtcgggc agcaccacct gcgacaccgt gcggcgctcg ggcgtgtgga attcgtcgcc
     1381 gcgctgctgg taggcgtcgg cgatcatctg ctcggtgacc tcgacctcgg cggccacgtc
     1441 ggcggggcgc atcagcatga cggtcagggc gcggtattcc ggcgccatga agctctgggc
     1501 gcgctccttg taccattgct ccagctcggc gg
//
LOCUS       DATIKR010000675         4050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_179866, whole genome shotgun sequence.
ACCESSION   DATIKR010000675 DATIKR010000000
VERSION     DATIKR010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4050
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179866"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..793
                     /locus_tag="VLL76_10755"
     CDS             167..793
                     /locus_tag="VLL76_10755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30032.1"
                     /translation="MRPLRFASLVAAVGLLAACAEGPFIDRPLEGKVRKPSDAIIERG
                     RVNVCYASAGEFAAAEKIAVDTCGAYGLQARLEFHDRYQCRLSTPHLATFQCYDPDMT
                     DRFGQYINPFNEQAVAEWRKRTGGKKGPTVPRATIIPGVPSAGATATAPKPAEPTPVP
                     PPPTAAPAPTPAPAPAAPEPAPPAPPPPNIDGGFTLHPGSWGDAFDQQ"
     gene            complement(803..3124)
                     /locus_tag="VLL76_10760"
     CDS             complement(803..3124)
                     /locus_tag="VLL76_10760"
                     /inference="COORDINATES: protein motif:HMM:NF026177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30033.1"
                     /translation="MHFGIAARFGLGLVAVSLATAMVIAVAVNQYFDGLIRHAEEREL
                     MGRYEQFADAIDASARQAEAMAAVVAGLPDVGHKVASGERDALEAMFVPGFAILRDKY
                     QAEQFQFHLPPATSFLRVHQPAKFGDDLSSIRQTVVRTNQTKGPTRGLEFGRAGLGVR
                     GIVPLLDKGAHVGSVEFGMSFGKPFFDAFKQSYDVDVTLHLPDADGFKAVGTVAGAGL
                     LKTDEIRTAFGGTKLVKAVDLGGKRVAVLARTIKDYGGHPLGVIEIAMDASRYEAELT
                     GARNTIFGLAVGAVVLASVLGAFIARGVTGPIRSVTGAMDRIARREFDFEMPDVDPKG
                     EIGAMLRAVVVLRENAAALSRMEEAQGRAMADLESRQEDLNASMHEQLVGVVEAAIQS
                     NEASVVLAHMSGDVRKAATESQTIAAAIEEMVASVNTIAQNADVAAREAVDAEAAAKE
                     GVGAAHQVEGAMDALLVTVGDVGGKIDALSEASGQIGEIIDQIEAIASQTNLLALNAT
                     IEAARAGEAGKGFAVVAAEVKGLANQTARATDTIRTRIDGLRTDMAAATRAMEQSREA
                     AEQGRASVDLVTGRLDAIAGRVDAVTGRMRDIAAILTQQTAASQEVSAGAGRIASLSH
                     GNYAEITEVLEAMNRASKVLDARVEGFAGAGTPEAVIEIAKNDHIRFKRSIIDRIMDR
                     TDLTADRLADHHTCRLGRWYDAVQSPKLRNQPAFARLLDPHQRVHAHGKRALELHALG
                     KTDEVLAEIELLNGASREVIDLLTELGRAVAEG"
     gene            3236..3496
                     /locus_tag="VLL76_10765"
     CDS             3236..3496
                     /locus_tag="VLL76_10765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PGPGW domain-containing protein"
                     /protein_id="HSV30034.1"
                     /translation="MTANTKKTLKIAAGILFLVLGVAGLALPFLQGVLFLAVGLVILA
                     PHWPWAGRQVARLRRRWPHRADQMDALVKRVKATIRRATRRR"
     gene            3512..>4050
                     /locus_tag="VLL76_10770"
     CDS             3512..>4050
                     /locus_tag="VLL76_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV30035.1"
                     /translation="MPVVLALCLAEVLTMAAVFAFPALLPQFMAAWGLSNTDAGWISG
                     IYFAGYAVAVPVLSALTDRIDAKRVWLGGAAITALSGLGFAVAADGFWSAMLFRALGG
                     IGLAGTYMPGLKALVDRTHGPQQPKWMSWYTASFSLGTSTSFLFAGWAAGLWGWRAAF
                     AVSGAAAVAALALVALALTP"
BASE COUNT          541 a         1444 c         1406 g          659 t
ORIGIN      
        1 cttcttgcct tcggacatcg atactctccc ttcccgcccc atttgtggcg ccgaaggata
       61 gcccactcgc gccttgggtg acaacgccgg aagcgggttc gccaccgcct cttcctctcg
      121 acccacgggt gggttaaaca agggggcaca tcatcaggga aagcccatgc gcccgctccg
      181 tttcgccagc ctggtggccg ccgtcggcct gcttgccgcc tgcgccgagg gaccgttcat
      241 cgaccgtccg ctcgagggca aggtccgcaa gccgtccgac gccatcatcg aacgcggccg
      301 cgtcaacgtg tgctacgcca gcgccggcga attcgccgct gccgaaaaga tcgcggtgga
      361 cacctgcggc gcctacggcc tgcaggcgcg gctggaattc cacgaccgct accagtgccg
      421 gctgagcacg ccgcatctgg cgacgttcca gtgctacgac cccgacatga ccgaccgctt
      481 cggccagtac atcaacccgt tcaacgagca ggcggtggcg gaatggcgga agcgcaccgg
      541 cggcaagaag gggccgacgg tgccgcgggc caccatcatc cccggcgtgc cgtccgccgg
      601 cgccaccgcg acggcgccga agccggccga gccgaccccg gtcccgccgc cgcccaccgc
      661 cgcgccggca cccactccgg cccccgctcc ggccgcgccc gagccggctc cgccggcgcc
      721 accgccgccc aacatcgacg gcggcttcac cctgcatccc ggcagctggg gcgacgcctt
      781 cgaccagcaa taggggcgat catcacccct cggccacggc cctgcccagt tcggtcagca
      841 ggtcgatgac ctcgcggctg gcgccgttga gcagctcgat ctcggccagc acctcgtcgg
      901 tcttgcccaa ggcgtgcagt tccagggcgc gcttgccgtg ggcgtggacc cgctggtggg
      961 ggtcgagcag gcgggcgaag gcgggctgat tgcgcagctt ggggctttgc accgcgtcgt
     1021 accaccggcc caggcggcag gtgtggtggt cggccaggcg gtcggccgtc aggtcggtgc
     1081 ggtccatgat gcggtcgatg atgctgcgct tgaagcggat gtggtcgttc ttggcgatct
     1141 cgatcaccgc ctcgggcgtg ccggcgccgg cgaagccctc gacgcgggcg tccagcacct
     1201 tgctggcgcg gttcatggcc tccagcacct cggtgatttc cgcataattg ccgtgcgaca
     1261 ggctggcgat gcgcccggcg ccggccgaca cctcctggct ggcggcggtc tgctgggtca
     1321 ggatggcggc gatgtcgcgc atgcggccgg tgacggcgtc gacccggccg gcgatggcgt
     1381 ccagccggcc ggtcaccagg tcgaccgacg cgcggccctg ctcggcggcc tcgcggcttt
     1441 gctccatggc gcgggtggcg gcggccatgt cggtgcgcag gccgtcgatg cgggtgcgga
     1501 tggtgtcggt ggcccgcgcc gtctggttgg ccaggccctt gacctcggcg gcgaccacgg
     1561 cgaagccctt gccggcctcg ccggcgcgcg ccgcctcgat ggtggcgttg agcgccagca
     1621 ggttggtctg ggacgcgatg gcctcgatct ggtcgatgat ctcgccgatc tggcccgaag
     1681 cctcggacag cgcgtcgatc ttgccgccga catcgccgac ggtgaccagc agggcgtcca
     1741 tggcgccctc gacctgatgg gcggcgccga cgccttcctt cgcggccgcc tcggcgtcca
     1801 ccgcctcgcg ggcggcgacg tcggcgttct gcgcgatggt gttgaccgag gccaccatct
     1861 cctcgatggc cgccgcgatg gtctggcttt cggtcgcggc cttgcgcacg tcgccgctca
     1921 tgtgggccag caccacgctg gcctcgttgc tctggatggc ggcctcgacg acgccgacca
     1981 attgctcgtg catgctggcg ttgaggtcct cctggcggct ttcaaggtcc gccatggcac
     2041 ggccctgggc ctcttccatg cggctcagcg ccgcggcgtt ctcgcgcagc acgacgacgg
     2101 cacgcagcat ggcgccgatc tcgcccttgg gatcgacgtc gggcatttcg aagtcgaact
     2161 cgcgccgggc gatgcggtcc atggcgccgg tgacggaacg gatggggccg gtgacgccgc
     2221 gcgcgatgaa cgcacccagc accgaggcca gcaccacggc gcccaccgcc aggccgaaga
     2281 tggtgttgcg ggcgccggtc agctcggcct cgtagcgcga ggcgtccatg gcgatctcga
     2341 tcacgcccag cgggtggccg ccgtaatcct tgatggtgcg ggccagaacg gcgacgcgct
     2401 tgccgcccag gtccacggcc ttgaccagct tggtgccgcc gaacgcggtg cggatctcgt
     2461 cggtcttcag caggccggcg ccggcgacgg tgccgaccgc cttgaagccg tcggcatccg
     2521 gcaggtgcag cgtcacgtcc acgtcatagg actgcttgaa ggcgtcgaag aacggcttgc
     2581 cgaacgacat gccgaattcc accgagccca catgcgcgcc cttgtccagc agcggcacga
     2641 tgccgcgcac gcccaggccg gcgcggccga attccaggcc gcgggtcggc cccttggtct
     2701 ggttggtgcg caccacggtc tggcggatcg acgacaggtc gtcgccgaac ttggccggct
     2761 ggtgcacccg caggaacgag gtcgccgggg gcagatggaa ctggaactgt tccgcctggt
     2821 acttgtcgcg caggatcgcg aagccgggca cgaacatggc ttccagcgcg tcccgctcgc
     2881 cgctcgccac cttgtggccg acgtccggca ggccggcgac cacggcggcc atggcctcgg
     2941 cctgacgcgc cgaggcgtcg atggcgtcgg cgaattgttc gtagcggccc atcagctcgc
     3001 gctcttcggc gtggcggatc aggccgtcga aatactggtt gacggcgacg gcgataacca
     3061 tggcggtcgc aagcgaaacg gcgaccaacc ccagcccgaa gcgggccgcg attccaaaat
     3121 gcatcaatgc tccccccgta gggcgttctt ccccagccgc tcgcgtatac cgtggattga
     3181 atgtgcgaaa aaagtggttt cttgcagcgc tatccaaaac acccatttgc cggggatgac
     3241 cgccaacacc aagaagaccc tgaagatcgc cgccggcatc ctgttcctgg tgcttggggt
     3301 cgccggattg gccctgccgt tcctgcaggg tgtgctgttc ctggcggtcg ggctcgtcat
     3361 cctggcgccc cactggccgt gggcgggacg gcaggtcgcc cgcctgcgcc ggcgctggcc
     3421 gcatcgggcg gaccagatgg acgccctggt caagcgggtg aaggccacga tccgccgtgc
     3481 cacccgccgc cggtgatgct aagactcgcg catgcccgtc gtgctcgccc tctgccttgc
     3541 cgaggtcctg accatggcgg cggtgttcgc cttccccgcc ctgctgcccc agttcatggc
     3601 cgcgtggggc ctcagcaaca ccgacgcagg ctggatctcg ggcatctatt tcgccggcta
     3661 cgccgtggcg gtgccggtgc tgtcggcgct gaccgaccgc atcgacgcca agcgggtgtg
     3721 gctgggcggt gccgccatca ccgcgctgtc gggcttggga tttgccgtgg cggccgacgg
     3781 cttctggtct gccatgctgt tccgcgccct gggcggcatc ggcctggccg gcacctacat
     3841 gccgggactg aaggcgctgg tcgaccgcac ccatgggccg cagcagccga aatggatgag
     3901 ctggtacacc gccagcttct cactgggcac cagcacctct ttcctgttcg ccggctgggc
     3961 cgccgggctg tgggggtggc gtgccgcctt cgcggtgtcg ggcgcggcgg ccgtggcagc
     4021 cctcgctttg gtggcgctgg cgctgacgcc
//
LOCUS       DATIKR010000676         2453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_107181, whole genome shotgun sequence.
ACCESSION   DATIKR010000676 DATIKR010000000
VERSION     DATIKR010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107181"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1075)
                     /locus_tag="VLL76_10775"
     CDS             complement(<1..1075)
                     /locus_tag="VLL76_10775"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV30036.1"
                     /translation="MSDRSLMLRNPTAFAFAVIGAMLAWRLAFLAFAAPNLSFDEAQY
                     WAWAQTLQLGYYSKPPMVAWAIAATTSVCGEGAGCVKAGSAFAQAGTAIVLFFLGRAL
                     FGPRVGAWASALWATMPAVSLSSVMITTDPFLLFFWALALLCLVRAAEAGPGVNRWWV
                     ALGLAMGLGLLAKYAMALFAASIALWLVWSRERRALAKAPGLWLAAGLALLVYAPNAV
                     WNAANGFVSYAHTKDNAHLGGDLFHFDKLAEFVGGQFGVFGPIAMAALLVALAGAARR
                     PEDDRFRLLAAFTLPVLALMTAESFLSRANANWSAPAYVAGTVLAAAFMARRWPRLLV
                     AALALNLAAAGVMYNMDAVRAGLG"
     gene            complement(1090..1806)
                     /locus_tag="VLL76_10780"
     CDS             complement(1090..1806)
                     /locus_tag="VLL76_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007675051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HSV30037.1"
                     /translation="MTSDPALDPRRLGLGHVEAWVFDLDNTLYPASSSLFPQIDVRMR
                     GFIAERLGLPLDEAFALQKRYYREFGTTLRGLMLVHGIEPGAFLDYVHDIDHSVLAAA
                     PLLDQALERLPGRKLIFTNGSERHAEKVVARLGIGRHFEAIFDIAAADYIPKPQPETY
                     AMMVERFGVDPRGSAMVEDIHRNLVPACAIGMTTVWVREDHHPDWQVVTQDDSDLGHV
                     HHITDDLVSWLARIAPPRAT"
     gene            1922..>2453
                     /locus_tag="VLL76_10785"
     CDS             1922..>2453
                     /locus_tag="VLL76_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV30038.1"
                     /translation="MSAPVEKQRGANQSIRRSVTFGPLALAAYPGPVVVLDADGAVLS
                     ANPRGESLAAAILDGRLAHLDTLLAAAQGEVQAVVETLSAANGGSGGLILELIGIPTQ
                     DGQIAVLGRDVTLERNLRSALVESRQRYKDLVEISSDFAWEVGEDGRFVFVSPKGALG
                     YSADELVGRHPSEFVAQ"
BASE COUNT          417 a          829 c          891 g          316 t
ORIGIN      
        1 ggcccaggcc ggcgcgcacc gcgtccatgt tgtacatcac cccggccgcc gccaggttga
       61 gtgccagcgc cgccaccagc aggcgcggcc agcgccgtgc catgaaggcg gcagccagca
      121 cggtgccggc cacataggcg ggcgccgacc agttggcgtt ggcgcgcgac aggaagctct
      181 ccgccgtcat cagcgccagc accggcaggg tgaaggcggc cagcaggcgg aagcggtcgt
      241 cctcgggccg ccgcgccgcg ccggccaagg cgaccagcag cgccgccatg gcgatggggc
      301 cgaacacgcc gaactggccg ccgacgaact cggccagctt gtcgaagtgg aacaggtcgc
      361 cgccgagatg ggcgttgtcc ttggtgtggg cgtaggacac gaagccgttg gcggcgttcc
      421 acacggcgtt gggggcgtag accaggagcg ccaggccggc ggccagccac aggccgggcg
      481 ccttggccag ggcgcggcgc tcgcggctcc acaccagcca cagggcgatg gaggcggcga
      541 acagcgccat ggcgtatttg gcgagcaggc ccaggcccat ggcgaggccc agcgccaccc
      601 accagcgatt gacccccggc cccgcctcgg cggcgcgcac caggcacagc agcgccagcg
      661 cccagaagaa cagcaggaac gggtcggtgg tgatcatcac gctcgacagc gacaccgccg
      721 gcatggtcgc ccacaaggcc gaagcccagg cgccgacgcg cgggccgaac agggcgcggc
      781 ccaggaagaa caggacgatg gcggtgccgg cctgggcgaa ggccgagccg gccttgacgc
      841 agccggcacc ctcgccgcag accgaggtgg tggcggcgat ggcccaggcc accatgggcg
      901 gcttggagta atagccgagt tgcagcgtct gcgcccacgc ccagtattgc gcctcgtcga
      961 acgacaggtt gggcgcggcg aaggccagga acgccagccg ccatgccagc atggcgccga
     1021 tcacggcgaa cgcgaaggcg gtggggttgc ggagcatcag gctgcggtcg gacatgcggc
     1081 cacgaagtat caggtcgcgc gcgggggcgc aatccgcgcc agccacgaca ccaggtcgtc
     1141 ggtgatgtgg tggacgtggc ccaggtcgct gtcgtcctgg gtcaccacct gccagtcggg
     1201 gtgatgatcc tcgcgcaccc acaccgtcgt catgccgatg gcgcaggccg gcaccaggtt
     1261 gcggtggatg tcctcgacca tggccgagcc gcgcggatcg acgccgaacc gctcgaccat
     1321 catggcatag gtctcgggct gcggcttggg gatgtaatcg gcggcggcga tgtcgaagat
     1381 ggcctcgaaa tggcggccga tgcccaggcg cgcgacgacc ttctcggcgt ggcgctcgga
     1441 accgttggtg aagatcagct tgcgccccgg cagccgctcc agcgcctggt ccagcagcgg
     1501 cgccgccgcc agcaccgaat ggtcgatgtc gtggacatag tcgaggaagg cgccgggctc
     1561 gatgccgtgc accagcatca ggccgcgcag ggtggtgccg aattcgcggt agtagcgctt
     1621 ctgcagcgcg aacgcctcgt ccagcggcag gcccaggcgc tcggcgatga agccgcgcat
     1681 gcgcacgtcg atttgcggga acaggctgga cgacgccgga tacagggtgt tgtccaggtc
     1741 gaacacccag gcctcgacat ggcccaggcc caagcggcgc ggatcaaggg cgggatcgct
     1801 cgtcatgccc aagctctagc ccccggaggg gagaaaggca agctttggga gatcgttaac
     1861 cttcgccact tatggtaaga gtgtcgtgca aagggggcca agtggggcgg aacggaagag
     1921 catgagcgcg ccggtcgaga agcaacgggg ggcgaaccag tccatccgac ggtcggtcac
     1981 cttcggcccg ttggccctgg cggcctatcc cgggccggtg gtggtgctgg acgccgacgg
     2041 cgccgtcctg tccgccaatc cacgcggcga atccctggcc gccgccatcc tggacggccg
     2101 tctggcccat ctcgacaccc tgctggccgc cgcccagggc gaggtccagg cggtggtgga
     2161 aaccctcagt gccgccaatg gcggcagcgg cggcctgatc ctggaactga tcggcatccc
     2221 cacccaggac ggccagatcg ccgtgctcgg ccgcgacgtc accctggaac gcaatttgcg
     2281 ctcggcgctg gtcgaatcgc gccagcgcta caaggacctg gtcgagatca gctcggactt
     2341 cgcctgggaa gtgggcgagg acggccgctt cgtgttcgtc agccccaagg gagccttggg
     2401 ctattccgcc gacgaactgg tcggccgcca tcccagcgag ttcgtggccc agg
//
LOCUS       DATIKR010000677         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47140, whole genome shotgun sequence.
ACCESSION   DATIKR010000677 DATIKR010000000
VERSION     DATIKR010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47140"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VLL76_10790"
     CDS             complement(<1..786)
                     /locus_tag="VLL76_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011311883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30039.1"
                     /translation="MALVPRSAAIALALLLTAGPSAARDELGPYGQLPGGAAASPSEA
                     PPLMEGLGNRSFPIATSDPRAQAYFDQGLRWSYGFNHGEAARAFRAAQRLDPACALCA
                     WGEALVLGPNINKPMDPADLPTARAALDRARALAATAPPKEQALIAALSQRYGEDGPR
                     DAAYAEAMADVARRFPDDHDIQALTAEAMMDTQPWDYWEADKTTPKGYTEAVVATLER
                     VLRADPDHPGAIHLYIHTVEASATPERALPYAQRLAAQMPAAGH"
     gene            918..1841
                     /locus_tag="VLL76_10795"
     CDS             918..1841
                     /locus_tag="VLL76_10795"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV30040.1"
                     /translation="MGGSRLLCAALALFAAWVSPVRAADRVVVGFAQDTLANDWRAAQ
                     VRHFIAALSGHPEIEVVVTNAGGSTAQQIMDVENLTAQGVKVLVTSPRDGDALAPAIA
                     AAHAKGIPVVLLTRRAATESYTTFIGPDDHAIGRHAAEFLNTRLGGRGRILVLTGVPT
                     ASTAIARTTGFVAALTAYPGLDIVAMRPGNYLRADALNATEDAVLSGLAFDAIYAQSD
                     SMASGARLALKGNGIAPASKPTIGIDYIREARDAIRAGEQEASFLYPTCAREGAEIVL
                     KLLKGQKVPREIVVPSELVTRENVDDVAPIF"
     gene            1819..>2082
                     /locus_tag="VLL76_10800"
     CDS             1819..>2082
                     /locus_tag="VLL76_10800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30041.1"
                     /translation="MTSLRSFDPSRLRGRLRHKLLALWLGSVLVVLLLVGLVMAALME
                     DFQQREARRDIGGAVAQFRHALVGASAELLRHGDLLAERRQVVA"
BASE COUNT          285 a          722 c          758 g          317 t
ORIGIN      
        1 gtgccctgcc gccggcatct gggccgccag ccgctgggcg tagggcaggg cgcgttcggg
       61 cgttgccgag gcctcgaccg tgtggatgta gaggtggatg gcgccgggat ggtcgggatc
      121 ggcccgcagc acccgttcca gcgtggcgac caccgcctcg gtgtagccct tgggcgtggt
      181 cttgtcggcc tcccagtaat cccacggctg ggtgtccatc atggcctcgg ccgtcagcgc
      241 ctggatgtcg tggtcgtcgg gaaagcgccg cgccacgtcg gccatggcct cggcataggc
      301 ggcatccctg gggccgtcct cgccgtaacg ctgggacagc gccgcgatca gcgcctgttc
      361 cttggggggc gcggtcgcgg ccagcgcgcg ggcgcggtcg agcgcggcgc gggcggtggg
      421 caggtcggcc gggtccatgg gcttgttgat gttgggacca agcaccagcg cctcgcccca
      481 ggcgcatagc gcgcaggccg ggtcgagccg ttgcgccgcg cggaaggcgc gcgcggcctc
      541 gccgtggttg aagccgtagg accaacgcag gccctggtcg aaataggcct gggcacgcgg
      601 gtccgaggtg gcgattggga acgaccggtt gcccaagccc tccatcaggg gaggggcctc
      661 ggacggcgat gcggcggctc cgccgggcaa ttgcccatac ggccctaatt cgtcgcgcgc
      721 ggcggacggc ccggccgtca gcagcaaagc cagcgcgatg gcggcggatc gcgggaccag
      781 ggccatggca gcctcccctg tgcctgaagt gacggttgaa caccgcccgc gatgcttggt
      841 tccaacgaga tttggcggtt gcggccggtg tgcgcttcgc ggacaatcgg cgtggttggg
      901 ataggttggg aaagccgatg ggcggatcgc gcctgctgtg tgccgcgctg gccctgttcg
      961 ccgcatgggt gtcgcccgtg cgcgcggcgg atcgtgtcgt ggtcggcttt gcccaggaca
     1021 ccctggccaa cgactggcgg gcggcgcagg tgcgccattt catcgccgcc ctgtccggcc
     1081 atcccgagat cgaggtggtg gtcaccaacg ccggcggcag caccgcccag cagatcatgg
     1141 acgtcgagaa tctgacggcc cagggcgtca aggtgctggt gacgtcgccg cgcgacggcg
     1201 atgccctggc cccggccatc gccgccgccc atgccaaggg catcccggtg gtgctgctga
     1261 cccgacgtgc cgccaccgaa agctacacca ccttcatcgg ccccgacgac cacgccatcg
     1321 gccgccatgc cgccgaattc ctcaacaccc gcctgggcgg gcgcggccgt atcctggtgc
     1381 tgaccggggt gccgaccgcg tccaccgcca tcgcccgcac caccggcttc gtggcggccc
     1441 tgaccgccta tcccggcctc gacatcgtgg cgatgcggcc gggcaactac ctgcgggccg
     1501 acgcgctgaa cgcgaccgag gacgctgtgc tgagcggact ggccttcgac gccatctacg
     1561 cccagagcga cagcatggcg agcggtgccc ggctggcgct gaaaggcaac ggcatcgccc
     1621 cggccagcaa gccgaccatc ggcatcgact acatccgcga ggcgcgcgac gccatccgcg
     1681 ccggcgagca ggaggccagc ttcctctatc ccacctgcgc ccgcgagggt gccgagatcg
     1741 tcctcaaact cctcaaaggc cagaaggtgc cgcgcgaaat cgtggtgccg tcggaactgg
     1801 tcacccggga aaacgtcgat gacgtcgctc cgatcttttg atcccagccg cctgcgcggc
     1861 cgcctgcgcc ataaattgct ggcgctgtgg ctggggtccg tgctggtggt gctgctgctg
     1921 gtcgggctgg tgatggcggc gctgatggag gacttccagc agcgcgaggc ccgccgcgac
     1981 atcggcggtg ccgtcgccca gttccgtcac gcgctggtcg gcgcgtcggc cgaattgctg
     2041 cgccacggcg acctgctggc cgagcgccgg caggtggtcg cc
//
LOCUS       DATIKR010000678         3258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_22139, whole genome shotgun sequence.
ACCESSION   DATIKR010000678 DATIKR010000000
VERSION     DATIKR010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22139"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VLL76_10805"
     CDS             complement(<1..349)
                     /locus_tag="VLL76_10805"
                     /inference="COORDINATES: protein motif:HMM:NF017020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEPN domain-containing protein"
                     /protein_id="HSV30042.1"
                     /translation="MNVDERVAAFMALAEEEASAAQALIAGFPRQAAYQLQQAAEKMV
                     RAILAAEGIAHGTGHNLGQMAAALPLDHPWRPRAMRLDKHSPAATRWRYPAPGGRLPP
                     PPSQETLRRDLDEL"
     gene            complement(346..825)
                     /locus_tag="VLL76_10810"
     CDS             complement(346..825)
                     /locus_tag="VLL76_10810"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HSV30043.1"
                     /translation="MPTPVVSLRASPKDADLLRRAARALKADHAVAARIEAAIAGRAM
                     PGGGGLHNYGPFGDEATALAFLRDRLVAALAPLEIRLFGSRGRGEGRPDSDFDLLVVL
                     PDGAEVDYDRAYAPLLGCGIGCDVVPCSLADWRAERDIPGTLCHAAAQGRPVYRREG"
     gene            947..1081
                     /gene="rpmH"
                     /locus_tag="VLL76_10815"
     CDS             947..1081
                     /gene="rpmH"
                     /locus_tag="VLL76_10815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSV30044.1"
                     /translation="MKRTYQPSKLVRARRHGFRSRMATVGGRRVINSRRGKGRKRLSA
                     "
     gene            1096..1509
                     /gene="rnpA"
                     /locus_tag="VLL76_10820"
     CDS             1096..1509
                     /gene="rnpA"
                     /locus_tag="VLL76_10820"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HSV30045.1"
                     /translation="MPTLARLKKRADFLRVAAQRRKWAAPGLILQAAPADVPLTKADS
                     TIDVVRVGFTVSKKVGNSVERNRARRRLKAAAAEILPLCAATGLDLVVIGRRESLTRP
                     YSLLLQDLRTALKRVGALRPGDDPQAAAPREAGKQ"
     gene            1506..1775
                     /gene="yidD"
                     /locus_tag="VLL76_10825"
     CDS             1506..1775
                     /gene="yidD"
                     /locus_tag="VLL76_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HSV30046.1"
                     /translation="MNPAGMALRGLIRGYQLFISPVLPASCRFAPSCSSYALEAVAKH
                     GPVTGSWLAARRICRCHPWNDGGFDPVPEPKNKAERGNAPSRHPD"
     gene            1782..>3258
                     /gene="yidC"
                     /locus_tag="VLL76_10830"
     CDS             1782..>3258
                     /gene="yidC"
                     /locus_tag="VLL76_10830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSV30047.1"
                     /translation="MNEQRNLILAIVLSAAILFGFQYFFPTTPTPRTDVAQGPVAGAP
                     PVPQGGDAAAPVAAAKPSPAESRAAAVGASRRIPVKTPALHGSVNLKGAVIDDLTLVR
                     YHETPDPSSPEITLLSPAGSPQAYFAEFGWVPADAAVKTPRPDSMWTPAAGSPAELGA
                     GGSLSLTWDNGEGLRFVRTYSVDENYMFSVNQRVENYGNKPVTLHPYGLVARGGTPKT
                     EGMYILHEGPLGVLDGTLKEISYEDLAKDGQVRDKTTGGWLGITDKYWLTALVPDQKE
                     EVTGRFVHQRLETGERYQVDFTGAPRVVQPGASAEAGSHFFAGAKQVALLDAYGDKLG
                     IERFSYAIDFGWFWFLTKPFFYLLQMLHAMMGNMGLAILGITVILKALMFPLANKSYV
                     AMTKMKKLQPQVQALQARYGDDKMRLQQEMMAIYKREKVNPVSGCLPILIQIPVFFAL
                     YKVLFVTIEMRHAPFVGWIKDLSAPDPTTIFNLFGIIPWDPP"
BASE COUNT          523 a         1158 c         1066 g          511 t
ORIGIN      
        1 gcaattcatc gaggtcgcgc cgcagcgtct cttggctggg cggtggcggc aatcgtccac
       61 ccggcgcggg ataacgccag cgggtcgcgg cgggggaatg cttgtccagc cgcatggcac
      121 gcggtcgcca cggatgatca agcggcagcg ccgctgccat ctggccgaga ttgtggccgg
      181 tgccgtgggc aatgccctcg gcggcgagga tggcgcgcac catcttctcg gccgcctgct
      241 ggagctgata ggccgcctgg cggggaaagc cggcgatcaa ggcctgggcg gcagaagcct
      301 cttcctccgc caacgccatg aaggccgcca cccgctcgtc cacgttcatc cctcccgccg
      361 gtagaccggc cgcccctggg cggcggcgtg gcacagggtg ccggggatgt cgcgttcggc
      421 ccgccagtcg gcaagactgc acggcaccac gtcgcagccg atgccgcagc ccagcagcgg
      481 ggcataggcg cggtcgtaat ccacctcggc gccatcgggc agcaccacca gcaggtcgaa
      541 gtcgctgtcg ggccggccct cgccgcgccc gcgcgatccg aacaggcgga tttccaacgg
      601 ggcgagcgcc gccaccaggc ggtcgcgcag gaaggccagg gcggtggcct cgtcgccgaa
      661 ggggccgtaa ttatggagcc cccctccgcc aggcatggcc cgcccggcga tggccgcctc
      721 gatgcgggcg gcgaccgcat ggtcggcctt cagcgcgcgt gcggcccggc gcagcaggtc
      781 ggcgtccttg gggctggcgc gaagcgacac aacgggcgtg ggcatgacga tccctgtatt
      841 acgaagccgt attacagtac cccgactcca atgattgact caaggcgtcg cccggcatat
      901 aaacccgcct tcgatttttg aacgaccgtt cgttggagta ccagacgtga agcgcactta
      961 ccagccgagc aagctcgtcc gcgcccgccg ccacggcttc cgcagccgca tggccaccgt
     1021 tggcggccgc cgggtcatca acagccgccg tggcaagggc cgcaagcgcc tgtcggccta
     1081 accagcgacg ggttgatgcc cacgctggcg aggctgaaga agcgggcgga ttttctccgt
     1141 gtcgcggcgc agcgtcgcaa atgggctgct ccgggactga tcctgcaagc agccccggcg
     1201 gatgtgcctt tgacgaaagc cgacagcacc attgacgtgg tgcgcgtcgg cttcaccgtt
     1261 tccaaaaagg tcggcaattc tgtcgagcgc aatcgcgcgc gccggcgcct gaaggcggcg
     1321 gctgccgaga ttctgccgct ctgcgcggcc accgggctcg acctggtggt gatcggccgg
     1381 cgggaatccc tgacccgacc ctattctctg ctgttgcagg atttgcgaac cgcgctaaaa
     1441 cgtgtcggcg cgttgcggcc gggggacgat ccccaggcgg cggcgcccag ggaggcggga
     1501 aagcagtgaa cccggccggc atggcgttgc gcggtttgat ccgcggctat cagcttttca
     1561 tctcaccggt tctgccggcg agttgccgct tcgcgccgtc gtgctccagc tacgccctcg
     1621 aggcggtggc gaagcacggc cccgtcaccg gttcgtggct cgcggctcgc cgcatctgcc
     1681 gctgccatcc ctggaacgac ggcgggttcg accccgtccc cgaaccgaag aacaaggccg
     1741 aacgcggcaa tgcgccgtcc cggcacccgg actaggatgt catgaacgaa cagcgcaatc
     1801 tgatccttgc catcgtcctg tcggccgcaa tcctgttcgg ctttcagtac ttcttcccga
     1861 cgaccccgac gccgcgcacc gatgtcgccc agggtcccgt cgccggcgct ccgccggtgc
     1921 cgcagggcgg cgacgccgcc gcgccggtgg ccgccgccaa gccaagcccg gccgaaagcc
     1981 gcgccgccgc cgtcggcgcc agccgccgca tcccggtcaa gaccccggcg ctgcacggct
     2041 cggtcaacct caagggcgcg gtcatcgatg acctgaccct ggtgcgctac cacgagaccc
     2101 ccgaccccag cagccccgag atcacgctgc tgtcgccggc cggctcgccg caggcctatt
     2161 tcgccgagtt cggctgggtg ccggccgatg ccgccgtcaa gaccccgcgc cccgattcca
     2221 tgtggacgcc cgccgccggc tcgccggccg aactgggcgc cggcggctcg ctgagcctga
     2281 cctgggacaa cggcgaaggc ctgcgcttcg tgcgcaccta ttcggtcgac gagaactaca
     2341 tgttctcggt caaccagcgg gtcgagaatt acggcaacaa gcccgtcacc ctgcacccct
     2401 acggcctggt ggcgcgcggc ggcacgccca agaccgaggg catgtacatc ctgcacgagg
     2461 ggcccttggg cgttctcgac ggcacgctca aggaaatctc gtacgaggat ctggccaagg
     2521 acggccaggt ccgcgacaag accaccggcg gctggctggg catcaccgac aagtactggc
     2581 tgaccgccct ggtccccgac cagaaggaag aggtcaccgg ccgcttcgtg caccagcgct
     2641 tggagactgg cgagcgctac caggtcgatt tcaccggcgc gccgcgcgtg gtgcagcccg
     2701 gtgcctcggc cgaggccggc tcgcacttct tcgccggcgc caagcaggtc gcgctgctgg
     2761 acgcctatgg cgacaagctg ggcatcgagc gcttctccta cgccatcgat ttcggctggt
     2821 tctggttcct gaccaagccg ttcttctatc tgctgcagat gctgcacgcc atgatgggca
     2881 acatgggcct ggccatcctg ggcatcaccg tcatcctgaa ggcgctgatg ttcccgctgg
     2941 cgaacaagtc ctatgtcgcc atgacgaaga tgaagaagct gcagccgcag gtccaggcgc
     3001 tgcaggcccg ctacggcgac gacaagatgc gcctgcagca ggagatgatg gccatctaca
     3061 agcgcgagaa ggtcaacccc gtctcgggct gcctgcccat cctgatccag atcccggtgt
     3121 tcttcgcgct ctacaaggtg ctgttcgtca ccatcgagat gcgccacgcg ccgttcgtcg
     3181 gctggatcaa ggacctgtcg gctcccgatc cgaccaccat cttcaacctg ttcggcatca
     3241 tcccgtggga tccgccca
//
LOCUS       DATIKR010000679         1788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_143600, whole genome shotgun sequence.
ACCESSION   DATIKR010000679 DATIKR010000000
VERSION     DATIKR010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143600"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VLL76_10835"
     CDS             <1..254
                     /locus_tag="VLL76_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30048.1"
                     /translation="DDVLFGGDGLDRFVFAAGCGDDRVMDFAAGDLLDLTAFALTWAQ
                     VSAATTNAAAETVVDLSAHGGGRVTLVGVPSLTEAAVLV"
     gene            complement(246..>1788)
                     /locus_tag="VLL76_10840"
     CDS             complement(246..>1788)
                     /locus_tag="VLL76_10840"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSV30049.1"
                     /translation="LECQGPLLPLLEGVDGIDEVVVKGEPRPEYDLCLSILSLPRFFT
                     HDLADLSGAAYLRAPAGRGRKFAELFDTPALKIGIVWSGSVTFKGNRTRAVNLPMLLR
                     AVDKVPGVKLYSLQKGPPEVELKRMGGHGAHITDLSPLLEDFGDTAAVLDQLDLVVMT
                     DSSVAHLAGAMGRPVWVLLGSGSHWLWLNDRADCPWYDSVRFIRQKRPGDWPELMDRV
                     RLELQQAAAAKLGAKLPEMPRQRPDILSQRMNAVAPSREGVLLYNRFDRYVGRSIAAY
                     REYGLGEQALLRRFILPGDTVLDVGANIGAHTLFFARAVGPAGRVHAFEPQRVVFQSL
                     CANMALNDITWAHCHWKAVGAAPGIASIPPVDYASTENFGGMALAAGGNGEPVEVATI
                     DSMNLPACRMMKVDVEGMEQQVLLGAAETIRRCKPILYLENDRRQNSPELIRLITGMG
                     YRMWWHLPRLFEPGNIAGNPFDIFGNIVSVNVLCCPPGVEPGQVVQTHHLREVTGPDD
                     WWRSN"
BASE COUNT          270 a          612 c          627 g          279 t
ORIGIN      
        1 gtgacgacgt gctgttcggc ggcgacggtc tcgaccgctt cgtcttcgcc gccggctgcg
       61 gcgacgaccg tgtcatggat ttcgcggccg gcgacctgct cgacctgacg gccttcgccc
      121 tgacctgggc gcaggtgtcg gcggcgacca ccaatgccgc cgccgaaacc gtggtggacc
      181 tgtcggccca tggcggcggc cgcgtcaccc tggtgggtgt gccgtcgctg accgaagccg
      241 cggtcctagt ttgatcgcca ccaatcgtcg gggccggtga cctcgcgcag gtggtgggtc
      301 tgcaccacct gccccggctc gacgcccggc gggcagcaca gtacgttgac cgacacgatg
      361 ttgccgaaga tgtcgaacgg gttgccggcg atgttgcccg gttcgaacag gcgcggcagg
      421 tgccaccaca tgcgatagcc catgccggtg atcagcctga tcagctcggg cgaattctgg
      481 cggcggtcgt tttccaggta caggatgggt ttgcagcgcc ggatggtctc ggccgcgccc
      541 agcagcacct gctgctccat cccttccacg tccaccttca tcatgcggca ggccggcagg
      601 ttcatggaat cgatggtggc gacctcgacc ggctctccgt tgccgccggc ggccagggcc
      661 atgccgccga aattctcggt cgaggcatag tccaccggcg gaatcgaggc gatgcccggc
      721 gcggcgccga ccgccttcca atggcaatgg gcccaggtga tgtcgttcaa cgccatgttg
      781 gcgcacagcg actggaacac cacgcgctgc ggctcgaagg cgtggacgcg ccccgccggc
      841 cccaccgcgc gggcgaagaa cagggtgtgg gcgccgatgt tggcgccgac gtccagcacg
      901 gtgtcgcccg gcaggatgaa gcggcgcagc aacgcctgct cgcccaggcc gtattcgcga
      961 taggcggcga tggagcggcc gacatagcgg tcgaagcggt tgtagagcag cacgccctcg
     1021 cggctggggg cgacggcgtt catgcgctgc gacaggatgt cggggcgctg gcgcggcatc
     1081 tcgggcagct tggcacccag cttggcggcg gccgcctgct gcagttccaa ccgcacccgg
     1141 tccatcaact cgggccagtc gccgggccgc ttctggcgga tgaaccgcac cgaatcgtac
     1201 cacgggcaat cggcgcggtc gttcagccac agccagtggc tgccgctgcc cagcagcacc
     1261 cacaccggcc gccccatggc gccggccaga tgggccaccg acgaatcggt catcaccacc
     1321 aggtcgagct ggtcgagcac ggcggcggtg tcgccgaaat cctcgagcag cggcgacagg
     1381 tcggtgatgt gggcgccgtg gccgcccatg cgcttgagtt cgacctcggg cgggcctttc
     1441 tgcaggctgt agagcttgac ccccggcacc ttgtccaccg cccgcaacag catgggcagg
     1501 ttgacggcgc gggtgcggtt gcccttgaag gtgacgctgc ccgaccacac gatgccgatc
     1561 ttgagggcgg gcgtgtcgaa caattcggcg aacttgcggc ctcgcccggc gggggcgcgc
     1621 agataggcgg cgccgctgag gtcggccagg tcgtgggtga agaagcgcgg caggctgagg
     1681 atcgacaggc acagatcgta ttccggccgg ggttcgccct tgaccaccac ctcgtcgatg
     1741 ccgtccacgc cctccagcag cggcagcagc ggcccctggc actccagc
//
LOCUS       DATIKR010000680         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_95449, whole genome shotgun sequence.
ACCESSION   DATIKR010000680 DATIKR010000000
VERSION     DATIKR010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95449"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..797
                     /locus_tag="VLL76_10845"
     CDS             <1..797
                     /locus_tag="VLL76_10845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV30050.1"
                     /translation="MLFPVATVPYPTTWDGDPDPAAKEQQALAALDKVLGPKVAAVIV
                     EPLIQGAGGMRMCRPEFLRALEARCREAGALLIFDEVMTGFGRTGEHFACVKAGVTPD
                     MVCLSKGLTGGFLPLSMTVCREEIYEAFLGLEIERAFLHGHSYTANPLGCAAGLASID
                     LLEAPDCQQRIRAIEAIHRQRLHGIAARHKVARPRLCGTVAAFDVEGEAGYGGGVGAV
                     LKKAFMERGLLFRPLGNVLYMLPPYCITDVELHRAWDAVDGVLAHL"
     gene            860..1411
                     /locus_tag="VLL76_10850"
     CDS             860..1411
                     /locus_tag="VLL76_10850"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HSV30051.1"
                     /translation="MKHLYALAVVAALGAGPALAQGATPDQAVERQYLAEIQQQLKQS
                     GYYQGQVDGVFGTQTSQALSQWQRDQGLPATGQIDGDTIAALEGGTATTQQAEVPESR
                     TEEQSVIEQQRQDETLRQVEPDQQAEVPQQSDQDTPSDLQSLREEHMSAPNIQGETVP
                     ERPGTGTPAPGASPDTLESPPRD"
BASE COUNT          257 a          586 c          501 g          214 t
ORIGIN      
        1 gcatgctgtt cccggtcgcc accgttccct atcccaccac ctgggacggc gaccccgacc
       61 ccgccgccaa ggaacagcag gcgctggcgg cgctggacaa ggtgctcgga cccaaggtcg
      121 cggccgtgat cgtcgagccg ctgatccagg gcgccggcgg catgcgcatg tgccgcccgg
      181 agttcctgcg cgcgctggag gctcgctgcc gcgaggccgg cgcgctgctg atcttcgacg
      241 aggtgatgac cggcttcggc cgcaccggcg agcatttcgc ctgcgtcaag gcgggggtca
      301 cgcccgacat ggtctgcctg tccaaggggc tgaccggcgg cttcctcccg ctgtccatga
      361 cggtctgccg cgaggagatc tacgaggcct tcctgggcct ggagatcgag cgcgccttcc
      421 tgcacggcca ttcctacacc gccaatccgc tgggctgcgc cgccggcctg gcctccatcg
      481 acctgctgga agcgcccgac tgccagcagc gcatccgcgc catcgaggcc atccaccgcc
      541 agcgcctgca tggtatcgcc gcccgccaca aggtggcgcg gccgcgcctg tgcggcaccg
      601 tcgccgcctt cgacgtcgag ggcgaggccg gctatggcgg cggcgtgggc gccgtgctga
      661 agaaggcctt catggagcgc ggcctgctgt tccggcccct gggcaacgtg ctctacatgc
      721 tgccgcccta ttgcatcacc gacgtcgaat tgcaccgcgc ctgggacgcg gtggacgggg
      781 tgctggccca cctctaggga accccgcggc ctccttcggc atttaccaag ggccaacagc
      841 ccttccgagg aggtcacgga tgaagcacct atatgcattg gcggtggtcg ccgcccttgg
      901 cgccggcccc gccttggcgc aaggcgccac acccgaccag gcggtcgaac gccagtacct
      961 ggccgaaatc cagcaacagc tcaagcaatc cggctattac cagggccagg tcgacggcgt
     1021 gttcggcacc cagaccagcc aggccctgtc ccagtggcag cgcgaccagg gcctgcccgc
     1081 caccggccag atcgacggcg acaccatcgc cgccctggaa ggcggcaccg ccaccaccca
     1141 gcaggcggaa gttcccgaaa gccgcaccga agagcaatcc gtcatcgagc agcagcgcca
     1201 ggacgagacg ttgcgccagg ttgaacccga ccagcaggcg gaagtcccgc agcaatccga
     1261 ccaggatacc ccgtccgacc tgcaaagcct gcgcgaagag cacatgagcg cgcccaacat
     1321 ccagggcgag accgtgcccg agcggcccgg caccggcacg ccggcccccg gcgcctcgcc
     1381 cgataccctg gaatcgccgc cgcgcgattg acggccacat tttgccccgg ccgccttggg
     1441 gaaccaattc cgcgaacagg cattgacccc gcagcgcgac cttgtagagg aggattgaga
     1501 tgaagacagc catcgccctt gccgtgctcg gcgccctggc ggtcaccccg gccctggc
//
LOCUS       DATIKR010000681         1870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191416, whole genome shotgun sequence.
ACCESSION   DATIKR010000681 DATIKR010000000
VERSION     DATIKR010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191416"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VLL76_10855"
     CDS             <1..536
                     /locus_tag="VLL76_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV30052.1"
                     /translation="GRRIRDLVDMGTGTGRVLEVLAPHVERAVGIDLSREMLAVARAN
                     LERAGLRHCMVRQGDITQLPLPAASADAVTLHQVLHYAAEPALLVAEAARVLKPDGLL
                     VVVDFAPHDQETLRDQHAHRRLGFADDEVTRWFAAAGLVPDGVTRLPGKPLTVVLWRA
                     RRLPETAKTIENQGASA"
     gene            533..1411
                     /gene="metF"
                     /locus_tag="VLL76_10860"
     CDS             533..1411
                     /gene="metF"
                     /locus_tag="VLL76_10860"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HSV30053.1"
                     /translation="MTPELPIAAATKRPVSVSFEFFPPKTEKMQETLWECIKRLEPLA
                     PQFVSVTYGAGGSTRERTHDTVVRIARETGLKPAAHLTCVGHQKGEVDDIARRYWDEG
                     IRHIVALRGDMPEGGKYEPTPGGYPYAVDLVHALKKIADFEISVAAYPEMHPDAPSAQ
                     FDIENLKRKIDAGATRAITQYFFDADVYRRFVDKARAAGITVPIVPGILPVTNFAQVQ
                     KFSAACGASVPAWMADLFEGLDGDPETRKLVAATVAAEQCRALAADGVEEFHFYTLNR
                     ADLAYAISHILGVRPK"
     gene            1469..>1870
                     /locus_tag="VLL76_10865"
     CDS             1469..>1870
                     /locus_tag="VLL76_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HSV30054.1"
                     /translation="MVTWKPKSDIDRARRLRTERATEAEKLLWSKLRSRQMDGVKFRR
                     QHPVGPYVLDFVCIERSLAVEVDGGQHADPAQAEYDRRRTDFLAAEGFEVLRFWNNDV
                     LGNIEGVWDTICARLAQRPSPPGPLSRKRARG"
BASE COUNT          299 a          665 c          625 g          281 t
ORIGIN      
        1 ccggccgccg catccgcgac ctggtggaca tgggcaccgg caccggccgc gtgctggaag
       61 tgctggcgcc ccatgtggag cgcgccgtcg gcatcgacct gtcgcgcgag atgctggcgg
      121 tggcccgcgc caacctcgag cgcgccggcc tgcgccattg catggtgcgc cagggcgaca
      181 tcacccaatt gccgctgccg gccgcctcgg ccgacgcggt gactttgcac caggtgctgc
      241 attacgccgc cgagccggcg ctgctggtgg ccgaggcggc gcgggtgctc aagcccgacg
      301 gcctgctggt ggtggtggac ttcgcccccc atgatcagga aacattgcgc gaccagcacg
      361 cccatcgccg cctcggcttc gccgacgacg aggtgacgcg ctggttcgcc gccgccgggc
      421 tggtccccga cggcgtcacc cgcctgcccg gcaagcccct gacggtggtg ctgtggcgcg
      481 cccgccgcct gcccgagacg gccaagacga tcgaaaacca aggagcctcc gcgtgacccc
      541 cgaacttccc atcgccgccg ccaccaagcg tccggtcagc gtctcgttcg aattcttccc
      601 gcccaagacc gagaagatgc aggagaccct gtgggaatgc atcaagcggc tggagccctt
      661 ggccccgcaa ttcgtgtcgg tcacctatgg cgccggcggc tcgacgcgtg agcgcaccca
      721 cgacaccgtc gtccgcatcg cccgcgagac cggcctgaag cctgccgccc acctgacctg
      781 cgtcggccac cagaagggcg aggtggacga catcgcccgg cgctattggg acgagggcat
      841 ccgccacatc gtcgccctgc gcggcgacat gcccgagggt ggcaagtacg agcccacgcc
      901 cggcggctat ccctatgccg tcgatctggt gcacgcgctg aagaagatcg ccgatttcga
      961 gatctcggtc gccgcctatc ccgagatgca tcccgacgcc cccagcgccc agttcgacat
     1021 cgagaatctg aagcgcaaga tcgatgccgg cgccacccgc gccatcaccc agtatttctt
     1081 cgacgccgac gtctatcgcc gcttcgtcga caaggcccgc gccgccggca tcaccgtgcc
     1141 gatcgtgccc ggcatcctgc cggtgaccaa tttcgcccag gtccagaagt tctcggccgc
     1201 ctgcggcgcc agcgtgccgg cgtggatggc cgacctgttc gagggcctcg acggcgatcc
     1261 cgaaacccgc aagctggtcg ccgccacggt ggctgccgag caatgccgcg cgctggcggc
     1321 ggacggggtg gaggagttcc atttctacac gctgaaccgc gccgacctgg cctacgccat
     1381 cagccacatc ctgggtgtgc ggccgaaatg aggaacccct cgcccgcttg cgggagaggg
     1441 gcaggggtga gggcctggga ggttccgctt ggtaacctgg aagccgaaat ccgacatcga
     1501 ccgggcgcgc cggctcagga ctgaacgcgc gaccgaggcc gagaagctgc tgtggtcgaa
     1561 attgcggtcg cgccaaatgg acggcgtgaa gttccggcgc cagcatcccg tcggccccta
     1621 cgtgcttgat ttcgtctgca tcgagcggag tctggcggtg gaagtggacg gcggccagca
     1681 tgccgatccg gcccaggcgg aatatgatcg ccgccggacc gactttttgg cggcggaggg
     1741 tttcgaggtc ctcaggttct ggaacaacga cgtattggga aacatcgagg gagtgtggga
     1801 tacgatctgc gcgcggctgg cgcagcggcc ctcacccccc ggccccctct cccgcaagcg
     1861 ggcgagggga
//
LOCUS       DATIKR010000682         4593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83311, whole genome shotgun sequence.
ACCESSION   DATIKR010000682 DATIKR010000000
VERSION     DATIKR010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4593
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83311"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..664
                     /locus_tag="VLL76_10870"
     CDS             <1..664
                     /locus_tag="VLL76_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013045934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV30055.1"
                     /translation="PLAAQAGSDIVLPCDVSDEASIDAVFETLKAKWGKLDFVVHAIG
                     YSDKEQLRGRYADTTLDNFTNTMHISVFSFTSVARRAADMMPDGGSLLTLTYYGAERV
                     MPHYNVMGVAKAALEASVRYLAVDLGGQNIRVNSLSAGPMKTLAASGIGDFRYILKWN
                     EYNSPLKRNVTLGDVGGAGLYLLSDLSSGVTGETHHVDSGYHVVGMKAVDAPDITVAA
                     KD"
     gene            672..1763
                     /gene="aroC"
                     /locus_tag="VLL76_10875"
     CDS             672..1763
                     /gene="aroC"
                     /locus_tag="VLL76_10875"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HSV30056.1"
                     /translation="MSGNGFGQVFRFSTFGESHGPAIGCVVDGVPSLLPLTEADIQPW
                     LDKRKPGQNRFTTQRREADEVRILSGVFEGKTTGTSIGLLIENTDQRSKDYGEIKDTF
                     RPGHADWVYQQKYGIRDYRGGGRSSARETAMRVAAGAVARVVLDHLVKGGVTIRGRMV
                     QMGPHKVSKRRSKWEVVDQNPFWCPDPVAAEQWEGYLDTIRKDGSSIGGVVEVVASGV
                     PVGLGEPVYDKLDADIAKAMMSINAVKGVEIGEGFGAAALRGEDNADEMVPGRKKGSV
                     RFLSNRAGGILGGISTGQDVVVRLAVKPTSSILIPKKSIDVHGNAIDVITKGRHDPCV
                     AIRAVPVAEAMLACVLADHLLRLRAFRGN"
     gene            complement(1916..2395)
                     /locus_tag="VLL76_10880"
     CDS             complement(1916..2395)
                     /locus_tag="VLL76_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30057.1"
                     /translation="MRKMIAALMLCLAAALPAQAQEVVGYVGQVPMLKLPEGNHPDIE
                     ALASKLWKAYWRGAGEHGFGPADLRVGRFDLDADGIAELFLMIDRDEWLSDHGKPLVV
                     ASWHKKAWVPVGWSWSDEDAVFVTQDRKDGWFGLDTGKHLMAWNAKKGYLLTEKPAP"
     gene            2662..2991
                     /locus_tag="VLL76_10885"
     CDS             2662..2991
                     /locus_tag="VLL76_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008622000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV30058.1"
                     /translation="MSTVEIGLIELEPEAVAAMLQSGEAVLVDVREEEEFAVERIAGS
                     HLVPMSDFEVETWPSFPGKTVIISCLGGVRSAAVARKLMASGQPWATHLKGGLNAWKD
                     AGLPTES"
     gene            3144..3440
                     /locus_tag="VLL76_10890"
     CDS             3144..3440
                     /locus_tag="VLL76_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HSV30059.1"
                     /translation="MLHTRPNIHPGEILREEFLKPAGVDVDRLARDIKLPKDRLDQLV
                     GGSGAVCVDTALRLSRYFGTSERFWLEMQMSYDLERARRAKSTIENEIDPLDAA"
     gene            3516..>4593
                     /locus_tag="VLL76_10895"
     CDS             3516..>4593
                     /locus_tag="VLL76_10895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HSV30060.1"
                     /translation="MRRLGRYLMGFLAVIGLLTISIIGLIIWGVASHEGRPALPSQMV
                     LTLDLEAEFNEASASDPLAKLTGDKTYALREVVRAIDAAAADQRVAGLFATMGQSKLG
                     LAAAQEVRDAVARFKASGKPAVVFAETMGEFGNGTLEYYLASGFGQVWLQPSGDVGLT
                     GFMAESPFFKGTFDMLGIQAQFGARHEYKSAIETFTEKSFSPQHKESLTTLLDSWMAQ
                     TVSGIAAARNMPAEKVRALVGNPLLANEALSAGLVDKLGYRDEALTAAQGGNGRKEVD
                     VRDYAAHAPAAKGTTVAVITGAGAIKRGEAEDRFGDQEFASATIAKAFRDAVDNPQVK
                     AILFRVDSPGGSYVASDTVWHEVRR"
BASE COUNT          788 a         1534 c         1541 g          730 t
ORIGIN      
        1 tccgctcgcc gctcaggccg gctcagacat cgtgctgccg tgcgacgtct cggacgaagc
       61 ctcgatcgac gcggtgttcg agaccctgaa ggccaagtgg ggcaagctcg acttcgtggt
      121 gcacgccatc ggctattccg acaaggagca gctgcgcggc cgctacgccg acaccacgct
      181 cgacaacttc accaatacca tgcacatctc ggtgttctcg ttcacgtccg tcgcgcggcg
      241 cgccgccgac atgatgccgg acggcggctc gctcttgacg ctgacctatt acggcgccga
      301 gcgcgtgatg ccccattaca acgtgatggg cgtcgccaag gccgcgctgg aagccagcgt
      361 gcgctacctg gcggtggatc tgggcggcca gaacatccgc gtcaactcgc tgtcggccgg
      421 tccgatgaag accctggcgg catcgggcat cggcgatttc cgctatatcc tgaagtggaa
      481 cgaatacaac agcccgctca agcgcaacgt caccctcggc gacgtcggcg gcgccggcct
      541 gtacctgctg tccgacctgt cgtcgggcgt gacgggcgaa acccaccacg tcgacagcgg
      601 ctatcacgtc gtcggcatga aggcggtgga cgcccccgac atcaccgtcg ccgccaagga
      661 ctgatccggt cgtgtcgggc aacggtttcg gccaggtctt ccgcttttcc accttcggcg
      721 aaagccacgg gccggccatc ggctgcgtgg tcgatggcgt gccgtcgctg ctgccgctga
      781 cggaagccga catccagccg tggctggaca agcgcaagcc gggccagaac cgtttcacca
      841 cccagcggcg cgaggcggac gaggtcagga tcctgtccgg cgtgttcgag ggcaagacca
      901 ccggcacctc catcgggctg ctgatcgaga acaccgacca gcggtccaag gattacggcg
      961 agatcaagga caccttccgt cccggccacg ccgattgggt ctatcagcag aaatacggca
     1021 tccgcgacta tcgcggcggc ggccgctcca gcgcgcggga aaccgccatg cgggtggcgg
     1081 ccggcgcggt ggcgcgcgtg gtgctggatc atctggtcaa gggcggcgtc accatccgtg
     1141 gccgcatggt ccagatgggg ccgcacaagg tgtcgaagcg ccgctccaag tgggaggtgg
     1201 tggaccagaa tccgttctgg tgccccgatc cggtggccgc cgagcaatgg gaaggttacc
     1261 tcgacaccat ccgcaaggac ggctcgtcca tcggcggagt ggtcgaggtg gtggcgtcgg
     1321 gcgtgccggt tggcctgggc gagccggtct acgacaagct ggacgccgac atcgccaagg
     1381 cgatgatgag catcaacgcg gtcaagggcg tcgagatcgg cgagggcttc ggcgccgccg
     1441 ccctgcgcgg cgaggacaat gccgacgaga tggtgccggg ccgcaagaag ggctcggtgc
     1501 gcttcctgtc caaccgggcc ggcggcatcc tgggcggcat ctcgaccggc caggacgtgg
     1561 tggtgcgcct ggcggtcaag ccgaccagtt cgatccttat cccgaagaaa agcatcgatg
     1621 tgcatggcaa cgccatcgac gttatcacca agggtcgcca cgacccctgc gtcgccatcc
     1681 gcgccgtgcc ggtggccgag gccatgctgg cctgcgtgct ggccgaccac ctgctgcggc
     1741 tgcgggcgtt ccgaggaaat taaggcagct cttcagccct tttccgtcat ggccggactt
     1801 gatccggcca tccacgcggc tggttcacac gcgctgccgg acggccccac gtggatacgc
     1861 gggtcaagcc cgcgcatgac ggcggactgg cggggacctc acggttcggt gacgcctaag
     1921 gcgccggctt ttccgtcagc aggtagccct tcttggcgtt ccacgccatc aggtgcttgc
     1981 cggtatccag tccgaaccag ccgtccttgc ggtcctgggt gacgaagacc gcgtcctcgt
     2041 cgctccacga ccagccgacc ggcacccacg ccttcttgtg ccacgacgcg acgaccagcg
     2101 gcttgccgtg gtcggacagc cattcgtcgc ggtcgatcat caggaacagt tcggcgattc
     2161 cgtcggcatc caaatcgaag cggccgaccc gcaggtcggc ggggccgaag ccatgctcgc
     2221 cggcaccgcg ccaataggcc ttccacagct tggacgccag cgcctcgatg tcgggatggt
     2281 tgccctcggg cagcttgagc atcggcacct ggccgacata gccgacaacc tcctgcgcct
     2341 gggcgggcag ggcggcggca aggcagagca tcaaggcggc gatcattttg cgcatggcgg
     2401 cgcggagcat agggagggcg gggggagagg tcaacaaaat gcccccgtcg gcccgtcatc
     2461 ccgggcgagc atcgcgagac ccgggatcca tggcggtgca cttccatgga ccccggctcg
     2521 cgctttgctt ggccggggtg acgggataaa aacacataga agatgtacaa tgcacattca
     2581 acaccaaaca tttgtgttga atcattcccc gatttcgcgc tatctccata accgtgcagt
     2641 tgatgcccgg agaaacacac catgagcacc gttgaaatcg gcctgatcga actcgaaccc
     2701 gaagcggtcg ccgccatgct gcagtccggc gaggccgtgc tggtggacgt gcgcgaggag
     2761 gaagagttcg ccgtcgagcg tatcgccggc tcgcatctgg tgcccatgag cgacttcgag
     2821 gtcgagacct ggcccagctt tcccggcaag acggtgatca tctcgtgcct gggcggcgtg
     2881 cgctcggccg ccgtggcgcg caagctgatg gcgtcgggcc aaccctgggc gacccatctc
     2941 aagggcggcc tcaatgcctg gaaggatgcc ggcctgccga ccgaaagtta aggggggccc
     3001 cctccctccg ggataccctg aacgcccgcg attaccgcag acggtctgtt gagagcggcg
     3061 gtcgtttcag cgatggtgcg caccccggaa cgcggtcggc ggaccacggt tccgggggca
     3121 gtcaccgggg aggaggagat cgaatgctgc atacccgccc aaacatccat ccgggcgaga
     3181 tcctgcgtga ggaattcttg aagccggcgg gcgtcgatgt cgatcggctg gcccgcgaca
     3241 tcaagctgcc caaggaccgg ctggaccagt tggtcggcgg cagcggcgcg gtatgcgtcg
     3301 acacggcgct acgactgtcg cgttatttcg gcacctccga gcggttctgg ctcgagatgc
     3361 agatgtccta tgacctcgag cgcgcgcggc gcgccaagtc caccatcgag aacgaaatcg
     3421 atccgctcga cgcggcgtga tccgccgggg ggtgcttgac ccgcaccccc cgtgcgtcta
     3481 tcaccgaggc agggcaccca acacgagtga atgccatgcg ccgcctcggc cgttatctga
     3541 tgggcttcct ggccgtgatc ggcctgctca ccatctccat catcggattg atcatctggg
     3601 gcgtcgccag ccacgagggc cggccggcgc tgccgtcgca gatggtgctg acgctggacc
     3661 tggaggccga gttcaacgag gcctcggcct cggacccgct ggcgaagctg accggcgaca
     3721 agacctatgc cctgcgcgag gtggtgcgcg ccatcgatgc cgccgctgcc gaccagcgcg
     3781 ttgccggcct gttcgccacg atgggccagt ccaagctggg cctcgcggcg gcccaggaag
     3841 tgcgcgacgc ggtcgcccgc ttcaaggcca gcggcaagcc ggcggtggtg ttcgccgaga
     3901 ccatgggcga gttcggcaac ggtacgctgg aatattacct ggcctcgggc ttcggccagg
     3961 tgtggctgca gccctcgggc gatgtcgggc tgaccggctt catggccgaa agcccgttct
     4021 tcaagggcac cttcgacatg ctgggcatcc aggcccagtt cggcgcccgc catgaataca
     4081 agagcgccat cgagaccttc accgagaaga gcttctcgcc gcagcacaag gaaagcctga
     4141 ccacgctgct ggattcgtgg atggcgcaga ccgtctcggg catcgccgcc gcccgcaaca
     4201 tgccggccga gaaggtgcgc gccctggtcg gcaacccgct gctggccaac gaggcgctgt
     4261 cggccgggct ggtggacaag ctgggctatc gcgacgaggc gttgacggcg gcccagggcg
     4321 gcaacgggcg caaggaagtg gacgtgcgcg actacgccgc ccacgccccc gccgccaagg
     4381 gcacaacggt cgccgtcatc accggcgccg gcgccatcaa gcgcggcgag gccgaggacc
     4441 gcttcggcga ccaggaattc gcctcggcca ccatcgccaa ggcgttccgc gacgccgtcg
     4501 acaatcccca ggtcaaggcc atcctgttcc gcgtcgacag ccccggcggc tcgtatgtcg
     4561 cctcggatac cgtgtggcac gaggtgcggc ggg
//
LOCUS       DATIKR010000683         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191429, whole genome shotgun sequence.
ACCESSION   DATIKR010000683 DATIKR010000000
VERSION     DATIKR010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191429"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /gene="grxC"
                     /locus_tag="VLL76_10900"
     CDS             <1..225
                     /gene="grxC"
                     /locus_tag="VLL76_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HSV30061.1"
                     /translation="PYCVRAKRLLDKKGVSYKEIDASDDAIRTAMVKRAGGRMTVPQI
                     FINGEHVGGCDDLYSLEAAGELDPMLQGVA"
     gene            222..1052
                     /locus_tag="VLL76_10905"
     CDS             222..1052
                     /locus_tag="VLL76_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HSV30062.1"
                     /translation="MTPFKAACIQVNASNDLQRNIDTAMRLAVEARGAGADLICMPEN
                     VAMMEWGRSNIVLKAMPEDDHLALKAFRELARELNCWLHVGSLAVLLDGGMVANRSFV
                     LRPDGGIAARYDKIHMFDVDLGLGEVYKESATFQPGDSAVVVDLPWGRMGLTICYDLR
                     FPHLYRALAKARCDFLAVPAAFTKTTGKAHWHVLLRARAIETGCYVFAPAQVGTHVAN
                     RETYGHALIVGPWGEIMADALEQPGWVMADIDPRKVGEARKKIPCLDHDRPFAMPPRD
                     "
     gene            1104..>1609
                     /locus_tag="VLL76_10910"
     CDS             1104..>1609
                     /locus_tag="VLL76_10910"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV30063.1"
                     /translation="MRVLLGIVALLILAALGMAVWIYAGGYDASATARDPKAVEWITE
                     TARRQSVRVHARDIPVPQLADPILVEEGARTFAAHCTQCHAAPGMAPPRIAAAMQPSP
                     PDLAQEVAEWTTPELFWIVRNGFKMTGMPAWGQILVDGEIWGVVAFLEQMPSMAPERY
                     QQLVSPPPP"
BASE COUNT          251 a          569 c          542 g          247 t
ORIGIN      
        1 ccctattgcg tccgcgccaa gcgcctgctg gacaagaagg gtgtgtcgta caaggagatc
       61 gacgcctcgg acgacgccat ccgcaccgcc atggtgaagc gcgccggcgg ccgcatgacg
      121 gtgccgcaga tcttcatcaa cggcgagcat gtgggcggct gcgacgattt gtactcgctg
      181 gaagcggcgg gcgagctgga tcccatgctg cagggcgtcg catgaccccg ttcaaggcgg
      241 cctgcatcca ggtcaacgcc agcaacgacc tgcagcgcaa catcgacacc gccatgcgcc
      301 tggcggtcga ggcgcgcggc gccggggccg acctcatctg catgcccgag aacgtggcga
      361 tgatggaatg gggtcgctcg aacatcgtcc tgaaggcgat gcccgaggac gatcacctgg
      421 cgctgaaggc cttccgcgag ctggcgcgcg agctgaattg ctggctgcat gtcggctcgc
      481 tggcggtgct gctggacggc ggcatggtcg ccaaccgctc gttcgtgctg cgccccgacg
      541 gcggcatcgc cgcgcgctac gacaagatcc acatgttcga cgtggatctc ggcctgggcg
      601 aggtctacaa ggaatcggcc accttccagc ccggcgattc ggccgtggtg gtggacctgc
      661 cgtggggccg catgggcctg accatctgct acgacctgcg cttcccgcac ctctatcgcg
      721 cgctggccaa ggcgcggtgc gatttcctgg cggtgccggc ggccttcacc aagaccaccg
      781 gcaaggccca ttggcacgtg ctgctgcgcg cccgcgccat cgagaccggc tgctacgtct
      841 tcgcccccgc ccaggtcggc acccatgtcg ccaaccgcga gacctatggc catgccctga
      901 tcgtcgggcc gtggggcgag atcatggccg acgcgctaga acagccgggc tgggtcatgg
      961 ccgacatcga cccccgcaag gtgggcgagg cccgcaagaa gatcccctgc ctcgaccacg
     1021 accggccgtt cgccatgccc cctcgcgact aagcccggca ccgcccatct gcccttgcgg
     1081 ggaatctccg cgcggagggc ggcatgcggg ttctgctggg tatcgtcgcg cttctgatcc
     1141 tggccgccct gggcatggcg gtgtggatct atgccggcgg ctacgacgcc tcggccaccg
     1201 cccgcgatcc caaggcggtg gaatggatca ccgagaccgc gcggcggcag tcggtgcggg
     1261 tgcatgcccg cgacatcccg gtgccgcaac tggccgatcc catcctggtc gaggaaggcg
     1321 cgcgcacctt cgccgcccat tgcacccaat gccacgccgc ccccggcatg gccccgcccc
     1381 gcatcgccgc cgccatgcag ccgtcgccgc ccgacctggc gcaagaagtg gcggaatgga
     1441 cgacacccga actgttctgg atcgtgcgca acggcttcaa gatgaccggc atgccggcct
     1501 ggggccagat cctggtggac ggtgagatat ggggcgtggt ggcgttcctg gagcagatgc
     1561 cgagcatggc gcccgagcgc taccagcaac tggtgtcgcc gcccccgcc
//
LOCUS       DATIKR010000684         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83322, whole genome shotgun sequence.
ACCESSION   DATIKR010000684 DATIKR010000000
VERSION     DATIKR010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83322"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VLL76_10915"
     CDS             complement(<1..372)
                     /locus_tag="VLL76_10915"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSV30064.1"
                     /translation="MPVLHATPRSTNRRKVDRVTREVAAIHKVLDEALVAHVGFVQGG
                     QPFVIPTNAWRVGDQLYFHFAKQSRIAEIMAAGAELCVAVTLVDGLVLARSAMHHSMN
                     YRSVMLFGRAEAVTEAKEKARL"
     gene            452..>1782
                     /locus_tag="VLL76_10920"
     CDS             452..>1782
                     /locus_tag="VLL76_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HSV30065.1"
                     /translation="MEPLLRTAPDPTLALPPLDRSATDSLQRQLARALRQAILAGRLT
                     AGTRLPSTRRLAAHLGIGRNTVLAAFEELAAEGFLDSRPGSGTVVAALPTPAPPAPPP
                     DRKLSARAALFMTVEKPRTRGWGETLGPGTPDLSHFPFAEWSRLLARRWRRPGRELTV
                     PEHPAGYPPLRTAIAEWLGRTRAVSCTPDQVVIVSGSQQALDLTARVLLDPGDVVMVE
                     DPCYSGLKGVLRAAGARLAGVPVDQDGFDIAEGERLWPDAKMACVTPSHQFPTGITMS
                     LPRRLAAVEWARRRGGWILEDDYDGEFRHAGPPLAALQGLDEARRTIHLGTFSKSMFP
                     GLRLGWLVLPEDLVAPFVAARQLADMAPPSLTQAAMADFMAEGLFARHLKRMRTLYAA
                     RRDAFAQACGRHLAGIGTIVPGEAGLHSVLWLPEGSDDRAFAAKAAAAGLEV"
BASE COUNT          245 a          633 c          629 g          275 t
ORIGIN      
        1 caggcgcgcc ttttccttcg cttcggtcac cgcctcggcg cggccgaaca gcatgaccga
       61 gcggtagttc atggaatggt gcatggccga gcgcgccagc accagaccgt ccaccaacgt
      121 gaccgccacg cacaattccg cgccggcggc catgatctcg gcgatgcggc tttgcttggc
      181 gaagtgaaaa tagagctggt caccgacccg ccaggcgttg gtggggatga cgaagggctg
      241 gccgccttgg acgaagccca catgggcgac cagcgcttcg tccagcacct tgtggatggc
      301 ggccacctcg cgggtgacac gatcgacctt gcggcggttg gtggaacggg gcgtggcgtg
      361 cagaacgggc atcggctttt tccaaaatgt cgggacggtg gtagggtgac gcctgaccgg
      421 cccttccgaa agcgccagtt tgcaattttc catggagcca cttttgcgca ccgcccccga
      481 ccccaccctg gccttgccac cactggaccg ctcggcgacc gactcgctgc agcgccagtt
      541 ggcgcgtgcg ctgcggcaag ccatcctggc ggggcggttg acggcgggga cgcggctgcc
      601 ctcgacgcgg cggctggcgg cccatctcgg gattggccgc aacacggtgc tggcggcgtt
      661 cgaggaactg gcggccgagg gcttcttgga cagccgcccc ggctcgggca cggtcgtcgc
      721 cgccctgccc acccccgcgc cgccggcgcc gccacccgac cgcaagctgt cggcgcgcgc
      781 cgcgctgttc atgacggtgg aaaagccgcg cacgcggggc tggggcgaga cgctcggccc
      841 cggcaccccc gacctgtccc atttcccctt cgccgagtgg agccggctgc tggcccggcg
      901 ctggcgccgg cccggccgcg aattgacggt ccccgagcat ccggccggct atccgcccct
      961 gcgcacggcc atcgccgaat ggctgggccg gacccgcgcg gtgtcatgca cgcccgatca
     1021 ggtggtgatc gtttccggct cgcagcaggc cctggatttg accgcccgcg tactgctcga
     1081 ccccggcgac gtggtgatgg tggaagaccc ctgctacagc ggcctgaagg gcgtgctgcg
     1141 ggcggcgggg gcgcggctgg ccggcgtgcc ggtcgaccag gacgggttcg acatcgccga
     1201 gggcgagcgc ttgtggcccg acgccaagat ggcgtgcgtg acgccgtcgc atcaatttcc
     1261 caccggaatc accatgtcgc tgccccggcg gctggcggcg gtggaatggg cgcggcggcg
     1321 cggcggctgg atcctggagg acgattacga cggcgagttc cgccatgccg gaccgccgct
     1381 ggccgccctg cagggactgg acgaggcgcg gcggaccatc cacctcggca ccttttcgaa
     1441 aagcatgttc ccgggcctga ggctgggctg gctggtgctg cccgaggacc tggtcgcccc
     1501 gttcgtcgcc gcccgccaac tggccgacat ggcgccgcca tcgctgaccc aggcggccat
     1561 ggctgatttc atggcggaag gattgttcgc ccgccacctc aagcgcatgc ggacgcttta
     1621 cgcggcccgc cgcgacgcct tcgcccaggc ctgcggccgc catcttgccg ggatcggcac
     1681 catcgttccc ggcgaggccg ggcttcattc ggtgctgtgg ctgcccgagg gaagcgacga
     1741 ccgcgccttt gcagcaaagg ccgccgccgc cggcctcgaa gt
//
LOCUS       DATIKR010000685         1788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_107295, whole genome shotgun sequence.
ACCESSION   DATIKR010000685 DATIKR010000000
VERSION     DATIKR010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107295"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="VLL76_10925"
     CDS             <1..776
                     /locus_tag="VLL76_10925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HSV30066.1"
                     /translation="GIAMGLIKEGKDFAVLSDILGDEDHLGDMDFKVAGTTEGVTALQ
                     MDIKITSITEEIMKIALGQAKDGRIHILGEMSKGLDSARTEVSGNAPRITTFNIPKEK
                     IREVIGTGGKVIREICETTGAKIDIEDDGTIKVASTDADAAQKAIDWIRGIVAEPEVG
                     VIYNGKVVKVVDFGAFVNFLGSRDGLVHISELSRERVAKTADVLQVGQQVKVKCLGFD
                     DRGKVKLSMKCVDQATGEDITAQIEAERKDKRKKEDAEA"
     gene            complement(1009..>1788)
                     /locus_tag="VLL76_10930"
     CDS             complement(1009..>1788)
                     /locus_tag="VLL76_10930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSV30067.1"
                     /translation="LISAVGHETNTTLIDFASDLRAPTPTAAAEKAVPVRAELVATVA
                     DCGARLVGALARGLEERRTRLDHLGRALPNPRRMIEDCALRLDDRVERLGNALPNLLH
                     RREAELERLAGRLKHPRELIAAKSHDLGQVSARLTHALDKVLHGEKARLERCALQIDQ
                     TGQRLRPAIERGLADRAGRLETLGKLLDSFSYKGVLERGFAVVRDAHGAVVSAVTAEA
                     GAHLAVEFKDGRVDVTVGPGGAPAKKAAKGTKGDGRQGSLL"
BASE COUNT          297 a          604 c          602 g          285 t
ORIGIN      
        1 ccggcatcgc catgggcctg atcaaggaag gcaaggactt cgccgtcctg tccgacatcc
       61 tgggcgacga ggatcacctc ggcgacatgg acttcaaggt ggccggtacc accgaaggcg
      121 tcaccgcgct gcagatggac atcaagatca cctcgatcac cgaggagatc atgaagatcg
      181 ccctgggcca ggccaaggac ggccgcatcc acatcctggg cgagatgtcc aagggtctgg
      241 actcggcccg caccgaggtg tcgggcaacg ctccgcgcat caccaccttc aacatcccga
      301 aggaaaagat ccgcgaagtc atcggcaccg gcggcaaggt catccgcgaa atctgcgaga
      361 ccaccggcgc caagatcgac atcgaggacg acggcaccat caaggtcgcc tcgactgatg
      421 ccgacgccgc ccagaaggcc atcgactgga tccgcggcat cgtcgccgag cccgaggtcg
      481 gcgtgatcta caacggcaag gtcgtcaagg tcgtggactt cggcgccttc gtgaacttcc
      541 tgggctcgcg cgacggcctg gtccacatct ccgagctgtc tcgcgagcgt gtggccaaga
      601 ccgccgacgt gctgcaggtc ggccagcagg tcaaggtcaa gtgcctgggc ttcgacgatc
      661 gcggcaaggt caagctgtcc atgaagtgcg tcgatcaggc caccggtgag gacatcaccg
      721 cccagatcga ggccgagcgc aaggacaagc gcaagaagga agacgccgag gcgtaagccc
      781 cggctccttc gcggttacgg aacgcgggtc gtcgcaagac ggcccgcgtt ttctttttga
      841 ggagatccct cgcccgcttg ggggagaggg cggcttggtt ttcaaggaca cagatgaaca
      901 cagatgaacg ccgccctacg agggactttt gcttatccgt gttcatccgt gttcatctgt
      961 gtctcacctc catccccgtc ttctttccaa gtgcctgcca ctcaggctct acagcaagct
     1021 cccctgccgc ccgtcgccct tggtgccctt cgccgccttc ttcgcgggcg cgccgcccgg
     1081 gccgacggtc acatcgacgc ggccgtcctt gaactcgacg gccaggtggg cgccggcttc
     1141 ggcggtgacg gcggagacga cggcgccgtg ggcgtcgcgc accacggcga agccgcgttc
     1201 cagcacaccc ttgtagctga aactgtccag cagcttgccc agcgtttcca gcctgccggc
     1261 gcggtcggcc aagccgcgct cgatcgccgg gcgcaggcgc tggccggtct ggtcgatctg
     1321 cagggcgcag cgctccagcc gcgccttctc gccgtgcagc accttgtcca gcgcgtgggt
     1381 caggcgcgcc gacacctggc cgaggtcgtg gcttttggcg gcgatcagct cgcgcgggtg
     1441 cttgaggcgg ccggccagcc gctccagctc ggcctcgcgg cggtgcagca ggttgggcag
     1501 ggcgttgccc aggcgctcga cccggtcgtc gagtctcagc gcgcaatcct cgatcatgcg
     1561 gcggggattg ggcaaggcac ggccgagatg gtcgagccgg gtgcgccgct cctccagccc
     1621 gcgcgccagg gcgccgacca ggcgggcgcc gcaatcggcg acggtggcga ccagttcggc
     1681 ccgcaccggc accgcctttt cggcggcggc ggtgggggtg ggggcgcgca ggtccgaggc
     1741 gaagtcgatc agggtggtgt tggtctcgtg gcccaccgcc gagatcag
//
LOCUS       DATIKR010000686         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47289, whole genome shotgun sequence.
ACCESSION   DATIKR010000686 DATIKR010000000
VERSION     DATIKR010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47289"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1542
                     /gene="mutS"
                     /locus_tag="VLL76_10935"
     CDS             <1..>1542
                     /gene="mutS"
                     /locus_tag="VLL76_10935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043743125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HSV30068.1"
                     /translation="RRNLELAETLGGDRKGSLLAIIDRTITGAGARLLAARLAAPLTD
                     PAAIDRRLDMVEFFVEHEGMRETVRDALRRCPDVERALSRLSLGRGGPRDLANVRDAL
                     GQIPALRNALNAPIDGPPEGVAKAARGLGEHSVLVDRLARALAPDLPLNARDGGFIQP
                     GYHAGLDELKTLRTEGFGMLARLERRYADETGIPTLKIRHNNIIGHHVEVGSKYADKL
                     DDRFVHRQTMANAARYTTTELIELAGKIQGAAERTLAVELELFDDLVKEVVGRAPEIA
                     AAARALAAIDVASALGQLAVECRWTRPVVDLTNDFDIKGGRHPVVEAALGPSGAFVAN
                     DCDLGDGQRLWLITGPNMAGKSTFLRQNAVIAVLAQMGAFVPADAARIGVVDRLFSRV
                     GAADDLARGRSTFMVEMVETAAILNQAGPRALVILDEIGRGTATFDGLSIAWSVVENL
                     HEVNRCRALFATHYHELTSLASRLPNLSCHQMRVKEWQGDVVFLHEVASGAADRSYGI
                     QVAKLA"
BASE COUNT          231 a          588 c          505 g          218 t
ORIGIN      
        1 cgccgcaacc tggaactggc cgaaaccctg ggcggcgacc gcaaggggtc gctgctggcg
       61 atcatcgacc gcaccatcac cggcgccggc gcccgcctgc tggccgcccg cctggcggcg
      121 ccgctgaccg accccgccgc catcgaccgc cgcctcgaca tggtggaatt cttcgtcgag
      181 cacgagggca tgcgcgagac cgtgcgcgat gccctgcgcc gctgccccga cgtggaacgc
      241 gccttgtcgc gcctcagcct cgggcgcggc ggcccgcgcg accttgccaa cgtacgcgat
      301 gccctgggcc agatccccgc cttgcgcaac gcgctcaacg cgcccatcga cggcccgccc
      361 gaaggcgtcg ccaaggccgc ccggggcctg ggcgagcatt cggtgctggt ggaccggctg
      421 gcccgcgcgc tggcccccga cctgcccctg aacgcccgcg acggcggctt catccagccg
      481 ggctaccatg ccgggctcga cgaactgaag acgctgcgca ccgagggctt cggcatgctg
      541 gcgcggctgg agcgtcgtta cgccgacgaa accggcatcc cgacgctgaa gatccgccac
      601 aacaacatca tcggccatca cgtcgaggtc ggcagcaaat acgccgacaa gctggacgac
      661 cgcttcgtcc accgccagac catggccaac gcggcccgct acaccaccac cgaactgatc
      721 gagctggccg gcaagatcca gggcgccgcc gagcgcaccc tggcggtcga gctggagctg
      781 ttcgacgatc tggtcaagga ggtggtcggc cgcgcccccg agatcgccgc cgccgcccgc
      841 gccctggccg ccatcgacgt cgcctcggcc ctgggccagc ttgcggtgga atgccgctgg
      901 acgcggccag tggtcgacct caccaacgat ttcgacatca agggcggccg ccatccggtg
      961 gtcgaggccg cgctgggacc gtcgggcgcc ttcgtcgcca acgattgcga cctgggcgat
     1021 ggccagcggc tgtggctgat caccggcccc aacatggccg gtaaatcgac cttcctgcgt
     1081 cagaacgcgg tgatcgcggt gctggcccag atgggtgcct tcgtgccggc cgatgccgcc
     1141 cgcatcggcg tggtcgaccg cctgttcagt cgcgtggggg ccgccgacga tctggcgcgc
     1201 ggccgttcca ccttcatggt cgagatggtc gagacggcgg ccatcctcaa ccaggccggc
     1261 ccgcgcgccc tggtgatcct cgacgagatc ggccgcggca ccgccacctt cgatggcctg
     1321 tccatcgcct ggtcggtggt cgagaacctg cacgaggtca accgctgccg cgccctgttc
     1381 gctacccatt accacgagct gaccagcctg gcgtctcgcc tgcccaacct gtcctgccac
     1441 cagatgcggg tgaaggaatg gcaaggcgac gtggttttcc tgcacgaggt cgccagcggc
     1501 gccgccgacc gctcctacgg catccaggtc gccaagctcg cc
//
LOCUS       DATIKR010000687         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_228635, whole genome shotgun sequence.
ACCESSION   DATIKR010000687 DATIKR010000000
VERSION     DATIKR010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228635"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VLL76_10940"
     CDS             complement(<1..388)
                     /locus_tag="VLL76_10940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017289258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HSV30069.1"
                     /translation="MTVKTVATSPFEGQKPGTSGLRKKVKVFQQPHYLENFVQAIFDS
                     IGDIKGKTLVLGGDGRYHNRAACQTILKMAAANGFAKVMVGQGGILSTPATSCVIRKY
                     KTFGGIILSASHNPGGPDEDFGIKYNI"
     gene            complement(497..1357)
                     /locus_tag="VLL76_10945"
     CDS             complement(497..1357)
                     /locus_tag="VLL76_10945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30070.1"
                     /translation="MKKTILAALLGCTLAMPAAAQSLEKAWETTGFANPESVLWDGVA
                     KVLYVSNVNGSPMDKDGNGYISKLSADGKVLAEKWVTGLDAPKGMAVFNGRLYISDVD
                     RVVVVDTKTGKITKTHAAAGAKFLNDVTEDDQGTIYVSDMLDSAIWRLKSGKLEKWLA
                     NPSLEAPNGLKVDKGRLVIASWGPMTGDGFKTSKPGNLKAVSINDTMIRDLGPGFGNL
                     DGLEPDGKGGWLVSDWLNGGVFRTDRQGQATRILSLDQGSADIGVIPEQKLLLVPMMM
                     HAKVVAYKLP"
     gene            complement(1414..>1892)
                     /locus_tag="VLL76_10950"
     CDS             complement(1414..>1892)
                     /locus_tag="VLL76_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HSV30071.1"
                     /translation="DFSAPLRIVETEVAVNDERKKKMAEKVVKACGGSVKGKTVAVLG
                     LTFKPNTDDMRDSPSLDIVPALKEAGAVIKAFDPEGMEEAKKLLPEITYCEDALATMA
                     GADCVVVITEWNEFRALDIGRIKSLLKSPIVVDLRNVWDPEEMRAAGFTYVSIGRV"
BASE COUNT          286 a          603 c          628 g          375 t
ORIGIN      
        1 ggatgttgta cttgatgccg aaatcctcgt cggggccgcc gggattgtgg ctggccgaca
       61 ggatgatgcc gccgaacgtc ttgtacttgc ggatgacgca ggaggtggcc ggcgtcgaca
      121 ggatgccccc ctgccccacc atcaccttgg cgaagccgtt ggcggcggcc atcttcagga
      181 tggtctggca ggcggcgcgg ttgtggtagc gaccgtcgcc gcccagcacc agggtcttgc
      241 ccttgatatc gccgatggag tcgaagatcg cctggacgaa attctccagg taatgcggct
      301 gctggaagac cttgaccttc ttgcgcaggc ccgaggtgcc gggcttctgg ccctcgaacg
      361 gcgacgtggc gacggtcttc acggtcatgc agggtctcct cggtcgttgt cttgtcaccc
      421 tgaggcgtag ccgaagggtc tttcaggcaa ccgcctcggg tgaaagatcc ttcgctgcgc
      481 tcaggatgac agatcgtcag ggcagtttat acgccaccac cttggcatgc atcatcatcg
      541 gcaccagcag cagcttctgc tcggggatca cgccgatgtc ggccgagccc tggtccagcg
      601 acaggatgcg ggtggcttgg ccctggcggt cggtgcggaa gacgccgccg ttcagccagt
      661 ccgacaccag ccagccgccc ttgccgtcgg gttccaggcc gtccaggttg ccgaagccgg
      721 ggccgaggtc gcggatcatg gtgtcgttga tgctgacggc tttgaggttg ccgggcttcg
      781 aggtcttgaa gccgtcgccg gtcatgggac cccacgaggc gatcaccagc cggcccttgt
      841 cgaccttgag gccgttgggc gcctccagcg acggattggc cagccacttc tccagcttgc
      901 cggacttcag gcgccagatg gcgctgtcga gcatgtcgga cacatagatg gtgccctggt
      961 cgtcttcggt cacgtcgttg aggaacttgg cgccggcggc ggcgtgggtc ttggtgatct
     1021 tgccggtctt ggtatcgacc accacgacgc ggtcgacgtc cgagatgtag agccggccgt
     1081 tgaacacggc catgcccttg ggggcgtcga ggccggtcac ccacttctcg gccagcacct
     1141 tgccgtcggc cgacagcttc gagatatagc cgttgccgtc cttgtccatg gggctgccgt
     1201 tgacgttgct gacgtacagc accttggcga cgccgtccca cagcaccgat tccggattgg
     1261 cgaagccggt ggtctcccac gccttttcca gcgactgggc ggcggcgggc atggcaaggg
     1321 tgcagcccag cagggccgca aggatggtct tcttcatgat attccccccc acgggaatgc
     1381 ccccgggcgt cgccgcccgg ggtaaatgac agcctagacg cggccgatgc tgacgtaggt
     1441 gaagccggcg gcccgcatct cctcgggatc ccacacgttg cgcaggtcca ccacgatcgg
     1501 gctcttcagc agcgacttga tgcggccgat gtcgagcgcg cggaactcgt tccactcggt
     1561 gatgaccacc acgcaatcgg cgccggccat ggtggcgagc gcgtcttcgc aataggtgat
     1621 ctcgggcagc agcttcttgg cctcttccat gccctcgggg tcgaacgcct tgatgacggc
     1681 gccggcttcc ttgagggcgg ggacgatgtc gagcgacggg ctgtcgcgca tgtcgtcggt
     1741 gttgggcttg aaggtcaggc ccagcacggc cacggtcttg cccttgacgg aaccgccgca
     1801 cgccttgacg accttttcgg ccatcttctt cttgcgctcg tcgttgacgg cgacctccgt
     1861 ctcgacgatg cgcagcggcg cgctgaaatc ct
//
LOCUS       DATIKR010000688         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83373, whole genome shotgun sequence.
ACCESSION   DATIKR010000688 DATIKR010000000
VERSION     DATIKR010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83373"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..542)
                     /locus_tag="VLL76_10955"
     CDS             complement(111..542)
                     /locus_tag="VLL76_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV30072.1"
                     /translation="MGLIDSDLRVLIIDANAHIRRLIATLLGALAIKDVAEARNPTAA
                     VPLMLSKAPDLIIADWTGDPTEILLFVHRIRRGELVDRRTPVLALSNSTHHAVLERAS
                     EAGIDDVIAKPLSAIDVIQRSASLIEGWRRVDYLAGASAAE"
     gene            complement(659..>1536)
                     /locus_tag="VLL76_10960"
     CDS             complement(659..>1536)
                     /locus_tag="VLL76_10960"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV30073.1"
                     /translation="VYAFLMVLVLTVFGGLWLNLRRFGRKARAIAEGAGGTTPFTKLN
                     RIPELDGVAREFDQMVGNLRATADAFRYAAEENAHAFKTPIATIAQAVEPLRRAVPAS
                     DSAGRSLQVIEAAVDRLDSLVAASRRLDQVNADLVTPPRQAVDLSKLVAALLDSYDEV
                     ADRGIQIERRVTAGCVIRASVEMMETVIENILENAISFSPTGGLIMVTVARGDGRVVL
                     AIDDQGPGAPEDVLERMFDRYVSHRPEQDPSGAPHFGIGLWIVRRNVAAVGGTVEARN
                     RDGGGLRVTVTLPSG"
BASE COUNT          237 a          502 c          553 g          244 t
ORIGIN      
        1 cgtcgctctc ggcccaggtc aggtagtcgt cggacagccg cgccagcgcg gcttcggcgc
       61 gcgccagggc ttcgggggag atttccgggt cgtcggcgtc ggccaagggc ctactccgcc
      121 gccgaggctc ccgccagata atcaacccgg cgccagccct cgatcaggga ggcggagcgc
      181 tggatgacat cgatggcgga caggggcttg gcgatcacgt cgtcgattcc cgcttccgac
      241 gcacgttcca ggacggcgtg gtgggtggag ttggacaacg ctagcacggg tgtgcgccgg
      301 tccaccagtt cgccgcgccg gatgcggtgg acgaacagca gaatttcggt ggggtcgccg
      361 gtccagtcgg cgatgatgag gtcgggggcc ttggacagca tcagcggcac cgccgccgtg
      421 gggttgcgcg cttccgccac gtccttgatg gccagcgcgc caagcagggt cgcgatcagc
      481 cgccggatat gtgcgttggc gtcgatgatc aggacgcgca agtcgctgtc gatgaggccc
      541 atccctgctc ccagcccttc gaggggcttt ggactttata aaatgttaag atacttctac
      601 tcctaataag cgatccgcac aaccatatcc gtggccgtat ggggtatcgc gatggtcctc
      661 agccggatgg cagggtgacg gtgacgcgca ggccgccgcc gtcgcggttg cgggcctcga
      721 ccgtgccgcc cacggcggcg acgttgcgcc gcacgatcca caggccgatg ccgaaatggg
      781 gcgcgcccga cgggtcctgt tccggccggt gcgagacgta gcggtcgaac atgcgctcca
      841 gcacgtcctc gggggcgccg ggcccctggt cgtcgatggc cagcaccacc cggccgtcgc
      901 cgcgcgccac cgtgaccatg atcaggccgc cggtgggcga gaacgagatg gcgttctcca
      961 ggatgttctc gatcaccgtc tccatcatct cgacgctggc gcggatgacg cagccggcgg
     1021 tgacgcggcg ctcgatctgg atgccgcggt cggcgacctc gtcatagctg tccagcaagg
     1081 cggccaccag cttggacaaa tccaccgcct ggcgcggcgg tgtcaccagg tcggcgttga
     1141 cctggtccag ccggcgtgac gccgccacca gcgaatccag gcgatccacc gcggcctcga
     1201 tcacctgcag cgagcggccg gcggaatcgc tggcgggcac ggcgcggcgc aaaggctcga
     1261 ccgcctgggc gatggtggcg atgggggtct tgaaggcgtg ggcgttttct tccgccgcat
     1321 agcggaaggc gtcggcggtg gcgcgcagat tgccgaccat ctggtcgaac tcgcgggcca
     1381 cgccgtccag ttcggggatg cggttgagct tggtgaaggg cgtggtgccg ccggcgccct
     1441 cggcgatggc gcgcgccttg cggccgaagc ggcgcaggtt cagccacagg ccgccgaaca
     1501 cggtcagcac cagcaccatc aggaaggcat agacgg
//
LOCUS       DATIKR010000689         3236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191487, whole genome shotgun sequence.
ACCESSION   DATIKR010000689 DATIKR010000000
VERSION     DATIKR010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191487"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..907)
                     /locus_tag="VLL76_10965"
     CDS             complement(<1..907)
                     /locus_tag="VLL76_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012695694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV30074.1"
                     /translation="MLTTILRTGCALAVMLAAASAAIAAEPVTIDLTKTPVPDVEALP
                     MDEHGKLVRYGRELVTATYKHIGPEVKDKSKRYAGNNLSCQSCHQQAGTMPYAMSYVG
                     VASVFPQYRAREDAMQTVEDRVNGCMERSMAGKPLPLDSREMKAYLAYIAYLSKDIPK
                     GAKIEGSGVKMVKMPDRMADVRRGEVVYKEICAACHGEDGQGVRNGKKGDAQGYQFPP
                     VWGPDSYNQGAGMYRLAMATRFAMHNMPQGTTHDAPTLSLDDAYDVMAFINTQPRMAK
                     IGMEKDFPNLLKKPADMPFPPYADNF"
     gene            complement(1007..1618)
                     /locus_tag="VLL76_10970"
     CDS             complement(1007..1618)
                     /locus_tag="VLL76_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV30075.1"
                     /translation="MTQPTTVFVVDDDEAMRHSLEFLLKSLGNPVKSFASAEDFLSAW
                     QPDQPGCLVLDVRMPGMGGLDLQRRLNEHAAQLAIVFISGHGDIPMVVRAMRAGAIDF
                     LEKPFNDQMLLDRVTAGLRLSTEACARAVRTRLVQGRVESLTAREREVMMLVAQGKPN
                     KVIAFELDISIKTVEVHRAHVMEKMGAANVAELTLMLVEVGQA"
     gene            complement(1615..>3236)
                     /locus_tag="VLL76_10975"
     CDS             complement(1615..>3236)
                     /locus_tag="VLL76_10975"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSV30076.1"
                     /translation="WQPTIRHLNAALPQYVFRAVPLDIPGLTRAVEAGEVAFAVTNPG
                     HYVELEARHRATRIATAEIVGGPSPAAALGAAIVVRADRADLRTIDDLRGRRIAAVLP
                     EAFGGFRLAWREMAARGIDPFRDATMAFLGFPIEGIVEAVARGDADAGVVRACLLEKL
                     AEEGRVHLADFNVLPPPDDGGLGCRHSTRLYPDWPFAKQSATPDALAKQVGVALLSMP
                     PEAGHAWTVPVDYQPVHELFHDLKIGPYDYLARRTLADTLRDYWPWLVAGGMAAVWWV
                     AHVVRVEYLVRRRTEELKSAHREARRQREELEHGARLALLGEMASSIAHEINQPLAAI
                     ANYASGCQRRLEAGTDADGVTEGLRMIAGQAERAAGIVKRIRAFVRKQGPEATALDLN
                     DVVLDAVDLFRGVAARRGVTVETALAPTLPRVAADRLQVEQVLLNLLQNAADAMAGGD
                     RRRVEVATAAAESGMVEVAVTDSGPGLAPEMRDRLFEPFFTTKPDGVGLGLSLSRSIV
                     EAHGGRLRAEDGPDCGARFRFTLPAFPTEPA"
BASE COUNT          473 a         1041 c         1194 g          528 t
ORIGIN      
        1 agaagttgtc ggcatagggc gggaagggca tgtcggcggg cttcttcagc aggttgggga
       61 agtccttttc catgccgatc ttggccatgc gcggctgggt gttgatgaag gccatcacgt
      121 cgtaggcgtc gtccaggctc agggtcggcg cgtcgtgggt ggtgccctgc ggcatgttgt
      181 gcatggcgaa gcgggtggcc atggcgaggc ggtacatgcc ggcgccctgg ttgtagctgt
      241 cgggtcccca caccggcggg aactggtagc cctgggcgtc acccttcttg ccgttgcgca
      301 cgccctggcc gtcctcgcca tggcaggcgg cgcagatttc cttgtagacg acttcgccgc
      361 gccggacgtc ggccatgcgg tcgggcatct tcaccatctt gacgcccgaa ccctcgatct
      421 tggcgccctt ggggatgtcc ttggacagat aggcgatgta ggcgagatag gccttcatct
      481 cacgcgagtc gagcggcagc ggcttgccgg ccatgctgcg ctccatgcag ccgttgacgc
      541 ggtcctcgac ggtctgcatg gcgtcctcgc gggcgcggta ttgcgggaac accgaggcga
      601 cgccgacata ggacatggca tagggcatgg tgccggcctg ctggtggcag ctttggcagg
      661 acaggttgtt gccggcatag cgcttggact tgtccttcac ctcggggccg atgtgcttgt
      721 aggtcgcggt caccagctcg cggccatagc gcaccagctt gccgtgctcg tccatgggca
      781 gggcttcgac gtcgggcacg ggggtcttgg tgaggtcgat ggtgaccggc tcggcggcga
      841 tggcggccga ggcggccgcg agcatcacgg caagggcgca gcccgtgcgg agaatggtgg
      901 tcaacatggc tgtctccctg tcctttggaa tggcttggga atcagcctat gccctttaga
      961 tgtttagcaa aattagggtt agaccttagt ccgtaagggg gagcccctac gcctggccta
     1021 cttccaccag catcagggtc aattcggcga cgttggcggc gcccatcttc tccatgacat
     1081 gggcgcggtg gacctcgacc gtcttgatcg agatgtcgag ttcgaaggcg atcaccttgt
     1141 tcggcttgcc ctgggccacc agcatcatca cctcgcgctc gcgcgccgtc agggattcga
     1201 cgcggccctg caccaggcgg gtgcggacgg cgcgggcgca ggcctcggtg ctgaggcgca
     1261 ggccggcggt gacgcggtcc agcagcatct ggtcgttgaa cggcttctcc aggaagtcga
     1321 tggcgccggc gcgcatggcg cgcaccacca tggggatgtc gccgtggccc gagatgaaga
     1381 cgatggccaa ttgcgccgcg tgttcgttga gccggcgctg caggtcgagc ccgcccatgc
     1441 cgggcatgcg cacgtccagc accaggcagc cgggctgatc gggctgccag gcggacagga
     1501 aatcctcggc cgaggcgaag cttttcaccg ggttgcccag cgacttcagc aggaattcca
     1561 gcgaatgacg catggcctcg tcgtcatcga ccacgaacac ggtggtgggt tgggtcatgc
     1621 gggctccgtg gggaaggcgg gcagggtgaa gcggaagcgg gcgccgcaat ccgggccgtc
     1681 ctcggcgcgc aggcgaccgc catgggcctc gacgatgctg cgcgacagcg acaggcccag
     1741 gccgacgccg tccggcttgg tggtgaagaa cggctcgaac aggcggtcgc gcatctcagg
     1801 ggcaagaccg gggccgctgt cggtcaccgc cacctcgacc atgccggact cggccgcggc
     1861 ggtggcgacc tcgacccggc ggcggtcgcc acccgccatg gcgtcggcgg cgttctgcaa
     1921 caggttcagc agcacctgct cgacctgcag gcggtcggcg gcgacccggg gcagggtcgg
     1981 cgccagcgcc gtctccaccg tgacgccacg gcgggcggcc acgccccgga acaggtcgac
     2041 ggcatcgagg accacgtcgt tgaggtcgag cgccgtcgcc tccggtccct gcttgcgcac
     2101 gaaggcgcgg atgcgcttga cgatgccggc ggcgcgctcg gcttggcccg cgatcatgcg
     2161 caagccttcg gtgacgccat cggcatcggt gcccgcttcc agccggcgct ggcagccgct
     2221 ggcgtaattg gcgatggcgg ccagcggctg gttgatctcg tgggcgatgc tcgacgccat
     2281 ctcgcccagc agggccagcc gcgcgccgtg ctccaattcc tcgcgctggc ggcgagcctc
     2341 gcggtgggcc gatttcagtt cctcggtgcg gcggcgcacc aggtattcga cgcgcaccac
     2401 atgggccacc caccagaccg ccgccatgcc gcccgccacc agccacggcc aatagtcgcg
     2461 cagggtgtcg gccagggtgc ggcgggccag gtagtcgtag gggccgatct tgaggtcgtg
     2521 gaacagctcg tgcaccggct ggtaatccac aggcaccgtc caggcatggc cggcctcggg
     2581 cggcatggac agcaaggcga cgcccacctg cttggccagt gcgtcgggcg tggccgattg
     2641 cttggcgaac ggccagtcgg gatacagccg ggtgctgtgg cggcaaccca ggccgccgtc
     2701 gtcgggcggc ggcagcacgt tgaaatcggc gaggtggacg cggccttctt cggccagttt
     2761 ttccagcagg caggcgcgca ccacgccggc atcggcgtcg ccgcgcgcca ccgcctcgac
     2821 gatgccttcg atgggaaagc ccaggaaagc catggtggcg tcgcggaacg gatcgatgcc
     2881 gcgcgccgcc atctcgcgcc aggccaggcg gaagccgccg aaggcctcgg gcagcacggc
     2941 ggcgatgcgg cggccgcgca ggtcgtcgat ggtgcgcagg tcggcgcggt cggcccgcac
     3001 cacgatggcg gcgcccaagg cggcggcggg agacgggccg ccgacgatct cggcggtggc
     3061 gatgcgggtg gcgcggtggc gtgcttccag ttcgacgtaa tggcccgggt tggtgacggc
     3121 gaaggcgacc tcgccggcct cgaccgcccg cgtcaggccg gggatgtcca gcggcacggc
     3181 gcggaacacg tattgcggca gggcggcgtt gagatggcgg atggtcggct gccaat
//
LOCUS       DATIKR010000690         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_71331, whole genome shotgun sequence.
ACCESSION   DATIKR010000690 DATIKR010000000
VERSION     DATIKR010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71331"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VLL76_10980"
     CDS             complement(<1..882)
                     /locus_tag="VLL76_10980"
                     /inference="COORDINATES: protein motif:HMM:NF044428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30077.1"
                     /translation="MATDNADLSLDWPRIKALAAAGDAGGALAALARRARPEDDFTTQ
                     RKHARFVSGLPLAEMGLRPLRVALLASSTTDHFAEVLHLWLALEGFAADIYQPPFGQT
                     VQSILDPASELYAFDPEVVWIFGTWRDAVLPVEPGASKAEVDAAVAQGVEASRQLWDT
                     LRRHSGCLIVHNNVDTPAHDVLGHFEGAVAWGRRSLHRAYNLALTEDLPPGVAIFDLD
                     HVSACYGKDRWTDMRYWYHSKHAIAFDALGTMAFHFARLVSAAKGLAKKCVVLDLDNT
                     LWGGVIGDDGLEGIKLGN"
     gene            complement(869..>1903)
                     /locus_tag="VLL76_10985"
     CDS             complement(869..>1903)
                     /locus_tag="VLL76_10985"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV30078.1"
                     /translation="AGEAADSVKNHAWFGAGGWQKGAFQVSATEWHTPVLDEVPPNWD
                     RIEAPFLNRTIQIRTASGCPFSCAFCSYPTTAGGWKTIEPERVRAHLDSIARIGGIDR
                     IIFIDDTFNVPKQRFKTLLDIFKDYDFEWFSFLRVQYVDDDIVRSMKDSGCRGVYLGV
                     ESADDRVLANMNKKARRADFERGLALLNKYGISSLSAFVLGFPGEDDKSIAANIDFIE
                     NCGVDFYSLKEFFYMTNTEVHNKREEFGLVGSGNNWKHDTMSYEQASQIKLDMFRSIK
                     NAVSVDPDTSLWYLAYLYDQGYSFDRIKELQTGLNSVMQDQLAGDMSLGTPSWEAVKR
                     AVRKDHHGDR"
BASE COUNT          326 a          616 c          621 g          340 t
ORIGIN      
        1 gttgcccagc ttgatgccct cgaggccgtc gtcgccgatg acgccgcccc acagcgtgtt
       61 gtccaggtcc agcaccacgc atttcttggc caggcccttg gccgccgaca ccagccgggc
      121 gaaatggaac gccatggttc caagcgcgtc gaacgcgatg gcgtgcttgg aatggtacca
      181 gtaccgcatg tcggtccagc ggtccttgcc gtagcaggcg gacacgtggt cgaggtcgaa
      241 gatcgccacc ccgggcggaa ggtcctcggt cagcgcgagg ttgtaggcgc ggtgcagcga
      301 ccgccggccc cacgcgaccg ccccttcgaa atggcccagc acgtcgtggg cgggggtgtc
      361 gacgttgttg tgcacgatca ggcagccgct gtgccggcgc agggtgtccc acaattgccg
      421 gctggcctcc accccttggg cgacggcggc atcgacctcg gccttcgagg cgcccggctc
      481 gaccggcagg acggcgtcgc gccacgtgcc gaagatccac accacctcgg gatcgaaggc
      541 gtaaagctcg ctggcagggt cgaggatgct ttgcaccgtc tggccgaacg gcggctggta
      601 gatgtcggcg gcgaagcctt cgagggcgag ccacaggtgc aggacctcgg cgaaatggtc
      661 ggtggtcgaa ctggccagca aggccacccg caacggccgc aggcccatct ccgccagcgg
      721 cagcccggaa acgaagcggg catgcttgcg ctgggtggtg aaatcgtcct cggggcgggc
      781 gcgcctggcc aaggccgcca gcgcgccgcc ggcatcgccc gccgccgcca gtgccttgat
      841 ccgtggccag tcgagagaaa ggtccgcgtt atcggtcgcc atgatggtct ttccgcaccg
      901 cacgtttcac cgcttcccag gacggcgtgc ccagcgacat gtcgccggcc agctggtcct
      961 gcatgacgct gttcagcccg gtctgcaatt ccttgatccg atcgaaggaa tagccctggt
     1021 cataaagata ggccaagtac cacaggctgg tgtcgggatc gaccgacacc gcgttcttga
     1081 tgctgcggaa catgtcgagc ttgatctgcg acgcctgctc gtagctcatg gtgtcgtgct
     1141 tccagttgtt gccggagccg accagcccga attcctcgcg cttgttatga acctcggtgt
     1201 tggtcatata gaagaattcc ttgagcgaat agaagtcgac cccgcaattc tcgatgaaat
     1261 cgatgttcgc ggcgatcgac ttgtcgtcct cgcccgggaa gcccagcacg aacgccgaca
     1321 gcgacgagat gccgtacttg ttcagcagcg ccaatccgcg ttcgaaatcc gcgcgacgcg
     1381 ccttcttgtt catgttcgcc agcacccggt cgtcggccga ttcgacgccc agatagacgc
     1441 cccggcaccc cgagtccttc atgctgcgca cgatgtcgtc atcgacatac tgcacccgca
     1501 ggaacgagaa ccactcgaag tcgtagtcct tgaagatatc cagcagggtc ttgaagcgct
     1561 gcttggggac gttgaaggtg tcgtcgatga agatgatgcg gtcgatgccg ccgatccgcg
     1621 cgatgctgtc gagatgggcg cggacccgtt ccggctcgat ggtcttccag ccgccggcgg
     1681 tggtgggata cgagcagaag gcgcacgaga acgggcagcc cgaggcggtg cggatttgaa
     1741 tggtgcggtt gaggaacggc gcctcgatcc ggtcccagtt gggcggcacc tcgtcgagca
     1801 ccggggtgtg ccattctgtc gccgacacct ggaaggcgcc cttctgccag ccgccggcgc
     1861 cgaaccatgc gtggttcttg acactgtccg ccgcctctcc ggc
//
LOCUS       DATIKR010000691         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_119095, whole genome shotgun sequence.
ACCESSION   DATIKR010000691 DATIKR010000000
VERSION     DATIKR010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119095"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1125)
                     /locus_tag="VLL76_10990"
     CDS             complement(<1..1125)
                     /locus_tag="VLL76_10990"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSV30079.1"
                     /translation="MILSGWGNFPRIHCRVAEFDSARLDAPLIARGAGRSYGDASLQP
                     NLTLLTRRLDRLLAFDAATGRLTCEAGVTLANLLDVFVPRGWFPPVTPGTKHVTIGGM
                     VAADVHGKNHHVAGSFGRHVESLRMLLADGGVVECGNGSDLFRATIGGMGLTGIILAA
                     TFRLQPIPTPWIRREVVRAASLEATLEAFEASAGWTYTVSWIDCLNGRGRLGRSLLSR
                     GEFAQPDEAPTTPPPATRPRRVPVDFPGWVLNRWSMRAFNELYYALPREPAVVPYEPF
                     FYPLDGLLEWNRIYGRGGFTQYQCVLPKPAGAAGLLRLLKAIQQSGSGSFLAVLKLFG
                     RQDGLMSFPMEGYTLALDFPVTPPNLSLLIELDAIVADHGG"
     gene            complement(1122..1508)
                     /locus_tag="VLL76_10995"
     CDS             complement(1122..1508)
                     /locus_tag="VLL76_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011911107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HSV30080.1"
                     /translation="MMLALRYVLFAALATAVNLATQHAALMVWDVLPAAMAAGTATGL
                     VAKYLLDKRWIFFDPSPRSGRQFGLYTLMGVLTTAIFWGAELAFAAWFETALMRDLGA
                     VLGLAIGYVTKYQLDRRFVFVVREPA"
     gene            complement(1505..>1755)
                     /locus_tag="VLL76_11000"
     CDS             complement(1505..>1755)
                     /locus_tag="VLL76_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008920728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prenyltransferase"
                     /protein_id="HSV30081.1"
                     /translation="SGFVSILVLALYINSPEVGRLYSHPEALWVICVLLLYWVSRVLM
                     LAHRGLVNDDPVVFAARDVTSLATVALSGVALFLGSLP"
BASE COUNT          311 a          584 c          635 g          225 t
ORIGIN      
        1 cccgccatgg tcggcgacga tggcgtccag ttcgatcagc aggctgagat tgggcggcgt
       61 gaccggaaag tcgagcgcca gggtgtagcc ctccatgggg aaggacatca gcccgtcctg
      121 ccgcccgaac agctttagta ccgccaggaa cgaccccgag cccgattgct ggatggcctt
      181 gagcagccgc agcaggccgg cggccccggc gggtttgggc agcacgcatt gatactgggt
      241 gaagccgccc cggccgtaga tgcggttcca ttccagcagt ccgtcgaggg gatagaagaa
      301 cggctcgtac ggcacgacgg ccggctcgcg cggcagggca taatacagct cgttgaaggc
      361 gcgcatggac cagcggttca gcacccagcc ggggaagtcc accggcaccc ggcgcgggcg
      421 cgtcgcgggc ggcggcgtag tcggcgcttc gtcgggctgg gcgaactcgc cgcgcgacag
      481 cagcgaccgc cccagccggc cgcgaccatt caggcagtcg atccaactga ccgtgtaggt
      541 ccagccggcc gatgcttcga acgcctccag tgtggcctcc aggctggcgg cgcgcaccac
      601 ctcgcggcgg atccacgggg tggggatggg ctgcaggcgg aaggttgcgg ccaggatgat
      661 cccggtcagc cccatgccgc cgatggtggc gcggaacagg tccgagccgt tgccgcattc
      721 caccacgccg ccgtccgcca gcagcatccg caggctctcc acgtggcggc cgaacgagcc
      781 ggcgacgtgg tggttcttgc cgtgaacgtc tgccgccacc atgccgccga tggtgacgtg
      841 cttggtgccc ggcgtgaccg gggggaacca gccacgcggc acgaacacgt cgagcaggtt
      901 ggcgagcgtc accccggcct cgcaggtcag gcggccggtg gcggcatcga aggcgagcag
      961 gcggtcgagc cggcgcgtca gcaaggtgag gttgggctgc agcgaagcgt cgccatagga
     1021 tcgcccggcg ccgcgcgcga tcagcggggc gtccagccgg gcggaatcga actcggcgac
     1081 gcggcaatgg atgcggggga aattgcccca gccggacagg atcatgccgg ctccctgacg
     1141 acgaagacga agcggcggtc cagttggtat ttggtgacgt agccgatcgc cagccccagc
     1201 acggcgccca ggtcgcgcat cagggccgtc tcgaaccatg cggcgaaggc cagttcggcg
     1261 ccccagaaga tggcggtggt gagcacgccc atcagggtgt aaaggccgaa ctggcggccc
     1321 gaccggggcg acggatcgaa gaagatccag cgcttgtcca acaggtattt cgcgaccagc
     1381 ccggtggcgg tgccggcggc catggcggct ggcaggacat cccacaccat cagggccgca
     1441 tgctgcgtcg ccaggttgac cgccgtcgcc agcgccgcga acagcacata gcgcagcgcc
     1501 agcatcatgg cagcgagccc aggaacagcg ccacgccgct gagggccacg gtcgccaggc
     1561 tggtgacgtc gcgggcggcg aacaccaccg ggtcgtcgtt gaccagcccg cgatgggcca
     1621 gcatcagcac ccggctgacc caatagagca gcagcacgca gatcacccac aacgcctcgg
     1681 ggtggctgta gaggcggccg acctcggggc tgttgatgta gagcgccagc accaggatcg
     1741 acacgaagcc gctgg
//
LOCUS       DATIKR010000692         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_155781, whole genome shotgun sequence.
ACCESSION   DATIKR010000692 DATIKR010000000
VERSION     DATIKR010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155781"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VLL76_11005"
     CDS             <1..642
                     /locus_tag="VLL76_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30082.1"
                     /translation="GYGPDVRATIDELLVFRRAFIAKPGVEVDDVVFLRGAQEEMWQK
                     LLQLQFAPNPVDVLRWMVDHGIAPTVAAYNGNVEEGFGIAREGILALTRWTSGLRQNM
                     RAYDGHTAMMSVLKHAAFTDDNALLFVHAGLDPSRPLSAQMDAFWWGSAGFELLDAGY
                     GGFKLVVRGSDRRRGGVRVGAFTASLDAGCGFGGPLTAACFGADGQILKMIEA"
     gene            700..>2042
                     /locus_tag="VLL76_11010"
     CDS             700..>2042
                     /locus_tag="VLL76_11010"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HSV30083.1"
                     /translation="MAEDRPNFWTSRRRWAAVAVAGTLAAMAAGHWLPDAGLRWGLVK
                     TLRDLGMSDVALGGADLSLFNGALVVRGVSAKPEGGAGLDLAGLLLDFRWKPLLSKRV
                     SVEALELDGADIELRRTGDGWELNGLPLAGGGEGGSQWSFDADRLRLTASRLTVLDGT
                     TRVAIDLDDLQIDNLRSWDAGQTMRYHLAGKVNGAPLVVDGSATPFADIPAFALTATA
                     EKLDLAPFARAAGLAKLAGKLSGEIALTGKVESARIPLEADGKLSAAGMAVEIDGTRL
                     AGDLAWTGKAHVDGAVKATGKLSADRLTVTAGGATVTAGHAVVEAAKAEWAGGKGSLD
                     GAIAAEAAQYGDADVTVSAQALSWKGKAGLAADGAIASEGSAEATAIAIRTLGRVIEQ
                     ARAGGTGSLNVVAAAKGVMPPLTGRFDAWAEGVMVREPIRDLAAAERVEAKGVAL"
BASE COUNT          283 a          720 c          740 g          299 t
ORIGIN      
        1 ggctatggcc cggacgtgcg cgccaccatc gacgaattgc tggtctttcg ccgcgccttc
       61 atcgccaagc cgggcgtcga ggtcgatgac gtcgtgttcc tgcgcggtgc ccaggaagag
      121 atgtggcaga agctgctgca actgcagttc gctcccaatc ccgtggacgt gctgcgctgg
      181 atggtcgatc acggcatcgc ccccaccgtg gccgcctata acggcaacgt cgaggaaggc
      241 tttggcatcg cccgcgaggg catcctggcc ctgacccgct ggaccagcgg cctgcgccag
      301 aacatgcgcg cctatgacgg ccacaccgcc atgatgagcg tgctcaagca cgccgccttc
      361 accgacgaca acgcgctgct gttcgtccat gccggcctgg acccgtcgcg gccgctgtcg
      421 gcgcagatgg acgccttctg gtggggctcg gccgggttcg aattgctgga tgccggctat
      481 ggcggcttca agctggtggt gcgcggttcg gaccgtcgcc ggggcggcgt gcgcgtcggc
      541 gccttcaccg cctcgctgga tgccggctgc ggcttcggcg gcccgctgac cgccgcctgt
      601 ttcggcgccg acggacagat cctgaaaatg atcgaggcct gacgcctttt ttgctccgca
      661 atccccggtt agaatcggcg cgggattggg ggaggacgca tggccgagga tcgcccgaat
      721 ttctggacaa gccgccgccg ctgggcggcc gtggcggtcg ccggcacctt ggccgcgatg
      781 gcggcgggcc attggctgcc cgatgccggc ctgcgctggg gcctggtcaa gaccctgcgg
      841 gacctgggca tgagcgacgt cgccctgggc ggcgccgacc tgtcgctgtt caacggcgcc
      901 ctggtggtgc gcggggtgag cgccaagccc gagggcggcg ccggcctcga cctggccggc
      961 ctgctgctgg atttccgctg gaagccgctg ctgtccaagc gggtgtcggt cgaggcgctg
     1021 gaactggacg gcgccgacat cgagctgcgc cgcaccggcg acggctggga actcaacggc
     1081 ctgccgctgg ccggcggcgg cgagggcggc agccagtgga gcttcgacgc cgaccgcctg
     1141 cgcctgaccg ccagccgcct gaccgttctt gatggcacca cccgcgtcgc catcgacctc
     1201 gacgacctgc aaatcgacaa tctgcgcagt tgggatgccg gccagaccat gcgctaccat
     1261 ctggccggca aggtcaacgg cgccccgctg gtggtggacg gcagcgccac ccccttcgcc
     1321 gacattcccg ccttcgccct gaccgcgacc gccgaaaagc tggatctggc gccgttcgcc
     1381 cgcgcggccg ggcttgccaa gctggcgggc aagctgtccg gtgaaatcgc gctcaccggc
     1441 aaggtcgaat cggccaggat ccccctggag gccgacggca aactgtctgc cgccggcatg
     1501 gcggtcgaaa tcgacggcac ccgtctggcc ggcgacctcg cctggaccgg caaggcccat
     1561 gtggacggtg cggtcaaggc caccggcaag ctgtcggccg accgcctgac cgtcaccgcc
     1621 ggcggcgcca ccgtcaccgc cggccatgcc gtggtcgagg ccgccaaggc ggaatgggcc
     1681 ggcggcaagg gcagcctgga cggcgccatc gcggccgagg cggcgcagta tggcgatgcc
     1741 gacgtgaccg tgtcggccca ggccctgtcg tggaagggca aggccggact ggccgccgac
     1801 ggcgccatcg cttcggaggg cagcgccgag gcgaccgcca tcgccatccg cacgctgggc
     1861 cgggtgatcg agcaggcccg cgccggcggc accggctcgc tgaacgtggt cgccgccgcc
     1921 aagggcgtga tgccgccgct gaccggccgc ttcgacgcct gggccgaggg cgtcatggtg
     1981 cgcgagccca tccgcgacct ggcggcggct gagcgggtcg aggccaaggg cgtggcgctg
     2041 ga
//
LOCUS       DATIKR010000693         3925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_240264, whole genome shotgun sequence.
ACCESSION   DATIKR010000693 DATIKR010000000
VERSION     DATIKR010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240264"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..1317)
                     /locus_tag="VLL76_11015"
     CDS             complement(10..1317)
                     /locus_tag="VLL76_11015"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV30084.1"
                     /translation="MAIPNGSLARRLILSLTLANALILVLAASMYLWRGYGSNASEVI
                     SHLKERAREVAVLGIVPAGEQAAVFDAASGAAAPGSDSEIVAHLPQALGRGLTDGVLV
                     FSGADTPHVIAVSRFEVDGRTVIGAVLHRGPLTAELWEWLGHELASDVLPIFVPLFVV
                     NLVVTVLTVRRTMEPVVALSRQARHMGPSTLDIRLGENGVPAEIAPLVRAVNAALDRV
                     EAGFTSQRRFTANAAHELRTPLAVLKARLEQVGDIDLRRQLVGDTERMARVVDQLLTV
                     ARMEARGLEMTEPVALVPLAEQVVADLFPLAQRAGKGISLEADGEPALPLGNADGLRD
                     ALRNLVENAVRMSPDGGCVEVVLDRDATIRVLDQGPGVPESQHEAIFEPFNRGPGSRG
                     GSAGLGLSIARSVVRLHGGDIAVRTRPGGGAEFAMVFARQARA"
     gene            complement(1319..1990)
                     /locus_tag="VLL76_11020"
     CDS             complement(1319..1990)
                     /locus_tag="VLL76_11020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017772983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV30085.1"
                     /translation="MRILLVEDEPELARFVADHLERHSFAVDLCGSLDEAEGALAANP
                     YDLVVLDLSLPDGDGIDILKRLRDRGDGTPVLAATARDAVDQRIRGLDLGLDDYLVKP
                     YDLGELTARVRALLRRPGHPLGVELHCGNLILDTRTMAVEVDGRAVVVGRRGVALLES
                     LMRSAGRVVSRRVLEERTYGIDDLIESNALEAIVSRLRRLLADQGCTAVLHTVRGVGY
                     MLSDA"
     gene            complement(2167..3561)
                     /locus_tag="VLL76_11025"
     CDS             complement(2167..3561)
                     /locus_tag="VLL76_11025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015765333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HSV30086.1"
                     /translation="MTRLIVGPFNRVEGDLEVILDVAGGVVREARVTAPMYRGFEQIL
                     ATRPVMDALVIAPRICGICSVSQSVAAARAIAALSDVEAPANGRLAADLVLACENVAD
                     HLTHFVLFFMPDFARDCYAGRPWFETARRRFKANEGEAPRRLVPARARLLHLMGILAG
                     KWPHSLALQPGGTTKAVDAGERIRLLSILAEFRETLEEVVFGGRLEDVAALTRDGLET
                     WTGGDFGLFLAIARDLSLESLGRGPGAFLSYGSFGLFAPGTWMDGGLRPLDTSGITED
                     PAYAWLAGKTAHPWGGLTQPDADKPGAYSWCKAPRLDGRVVETGALARQVVTGDPLAR
                     ALAAETGGSVRDRVVMRLVEMARLVIAMEAWAAALNPRDPFCTAPDLPADGAAMGLTE
                     AARGALGHWLAVENGTIKGYQIVAPTTWNFSPRDEAGTPGPLEQALVGTEVEGAAVQH
                     VVRSFDPCMVCTVH"
     gene            complement(3558..>3925)
                     /locus_tag="VLL76_11030"
     CDS             complement(3558..>3925)
                     /locus_tag="VLL76_11030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014429791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HupU protein"
                     /protein_id="HSV30087.1"
                     /translation="YEFKASAARHSDRGCLMENLGCKATQAPGDCNTRRWNGHGSCTD
                     AGYACIACTNPGFQDPGAPFLETPKVAGIPVGLPVDMPKAWFVALAALSKSATPQRVR
                     TNAHADHVVVPPARKAPKP"
BASE COUNT          651 a         1377 c         1334 g          563 t
ORIGIN      
        1 taaaagagct caggctcggg cctgcctggc gaagaccatg gcgaattcgg cgccgccgcc
       61 cggacgggtc cgcacggcaa tatcgccgcc atgaaggcgc acaacgctac gggcgatact
      121 caagccaagg ccggcgctgc cgccccgcga tccgggacct cggttgaacg gctcgaagat
      181 ggcctcgtgt tgggattcgg gtacgcccgg cccctggtcg aggacgcgga tggtggcgtc
      241 gcgatccagt accacctcaa cgcagcctcc gtccggcgac atccggaccg cattttccac
      301 caagttcctg agggcgtcac gcagcccatc ggcatttccc aacggcaatg ccggctcgcc
      361 gtcggcctcc agactgatgc ccttaccggc ccgctgggcc agcggaaaca gatccgccac
      421 cacctgctcg gcgagcggca ccagcgcgac cggctccgtc atctccaggc cgcgagcctc
      481 catccgggcg acggtcagca actgatcgac gacgcgagcc atccgctccg tgtctccgac
      541 caactggcga cggaggtcga tgtcgccgac ctgctcgagg cgcgccttga ggacggccag
      601 cggcgtcctc agctcgtggg ccgcattggc agtgaatctg cgctggctgg tgaagccggc
      661 ctcgacgcga tccagggcgg cgttgaccgc ccgcaccagg ggcgcgatct cggcgggaac
      721 gccgttctcg cccaagcgga tgtccagggt gctcggcccc atgtgccggg cttgccgcga
      781 cagggcgacg accggctcca tggtccgccg caccgtcagg accgtgacca ccaggttgac
      841 gacgaacagc ggcacgaaga tcggcaggac gtccgaggcg agctcgtgtc ccagccactc
      901 ccacaattct gcggtcaacg gcccccgatg caagacggcg ccgataaccg tgcggccatc
      961 gacttcgaag cgggacacgg cgatgacgtg gggggtatcg gccccggaaa agaccagaac
     1021 gccgtccgtc aagccgcgcc ccagagcttg cggcaggtgt gccacgattt cagagtccga
     1081 tccgggtgcg gcagctccgc tggcggcatc gaagacagcg gcctgctccc ccgcgggaac
     1141 aatgcccagg acggccactt cgcgggcccg ctccttgagg tggctgatga cctcgcttgc
     1201 gttggagccg tagccgcgcc acagatacat gctggcggcc agcaccaaaa tcagggcatt
     1261 ggccagggtc aacgacagga tgaggcgccg tgcgagcgac ccgttcggaa tcgccatctc
     1321 aagcgtcgct cagcatgtag ccgacgccgc gcaccgtgtg caggaccgcg gtacagcctt
     1381 ggtcggcgag caggcggcga agacgcgaaa cgatggcctc cagggcattg gattcgatca
     1441 gatcatcgat tccgtacgtc cgctcttcca gcacccgtcg cgacaccacc cttcccgccg
     1501 accgcatcag gctttcgagc agggccacgc cgcgccgccc caccaccacc gcacggccgt
     1561 ccacctccac cgccatggtg cgggtgtcga gaatcaggtt gccacagtgc aactccaccc
     1621 ccaaggggtg ccccgggcgg cgtagcaggg cgcgaacccg cgccgtcaac tcgcccaggt
     1681 catagggctt caccaagtag tcatcaaggc cgagatcgag tcccctgatc ctctgatcca
     1741 ccgcgtcgcg ggccgtcgcc gccagcaccg gtgtgccatc gccccggtcg cgcagacgct
     1801 tcaagatgtc aatcccgtcg ccgtcgggca gggacaggtc caggaccacg aggtcgtatg
     1861 ggttcgccgc aagggcgcct tccgcctcgt cgaggctgcc gcatagatcg acggcgaagg
     1921 aatgtcgctc cagatgatcg gcgacaaagc gcgccaattc gggctcgtcc tcgaccaaca
     1981 gaatacgcat gccgctcctc ccgaaatcac cctgtaggat aaatgccgac gcgagcttac
     2041 gccaccctga cggggtgacc tgctttgggg ccccctactc agtgcgtcta cagcgttcca
     2101 taatggacgc atggtggacg gatgttggga cacgctccca accccgcgta atccctcacg
     2161 attttttcaa tgcaccgtgc acaccatgca cggatcgaag ctccgcacca cgtgctgcac
     2221 cgccgcgccc tcgacttcgg tgccgaccag ggcctgttcc agggggccgg gggttccggc
     2281 ctcgtcgcgg gggctgaagt tccaggtggt gggggcgacg atctggtagc ccttgatggt
     2341 gccgttttcc accgccagcc agtggcccag ggcgcctcgg gcggcttcgg tcaggcccat
     2401 ggctgccccg tcggcaggga ggtcgggggc ggtgcagaac gggtcgcgcg ggttcagggc
     2461 ggcggcccag gcttccatgg cgatgaccag gcgggccatc tcgaccagcc gcatcaccac
     2521 gcggtcgcgc acgctgccgc cggtctcggc cgccagggcg cgggccagcg ggtcgccggt
     2581 caccacctgg cgggccaggg cgccggtctc gaccacgcgg ccgtccaggc gcggcgcctt
     2641 gcaccaggaa taggcgccgg gcttgtcggc gtcgggctgg gtcaggcctc cccacggatg
     2701 cgccgtcttg ccggccagcc aggcataagc ggggtcctcg gtgatgcccg aggtgtcgag
     2761 cgggcgcagg ccgccgtcca tccaggttcc gggggcgaac aggccgaagc tgccatagga
     2821 caggaaggcg ccggggccgc gccccaggct ttccagcgac aggtcgcggg cgatggcgag
     2881 gaacaggccg aaatcgccgc cggtccaggt ttccaggccg tcgcgggtga gggccgccac
     2941 gtcctccagc cggccgccga acaccacctc ttccaacgtc tcgcggaact cggccaggat
     3001 cgacagcagc cggatgcgct cgccggcatc caccgccttg gtggtgccgc cgggctgcag
     3061 cgccaaggaa tgcggccact tgccggccag gatgcccatc aggtgcagca ggcgggcgcg
     3121 ggccgggacc aggcggcgag gggcctcgcc ctcgttggcc ttgaagcgcc gccgtgccgt
     3181 ctcgaaccac ggccgcccgg catagcagtc gcgggcgaag tcgggcatga agaacagcac
     3241 gaaatgggtc aggtggtcgg cgacgttctc gcaggccagc accagatcgg cggccaggcg
     3301 gccgttggcc ggcgcctcga catcggacag ggcggcgatg gcgcgggcgg cggccaccga
     3361 ctgcgatacc gagcagatgc cgcagatgcg cggcgcgatc accaaggcgt ccatcaccgg
     3421 ccgggtcgcc aggatctgct cgaagccgcg atacatgggc gcggtgacgc gggcctcgcg
     3481 caccactccg ccggcgacgt ccagaatcac ctccagatcg ccctcgacgc ggttgaaggg
     3541 accgacgata aggcgcgtca tggcttgggc gccttgcggg cgggcggcac caccacatgg
     3601 tcggcatggg cgttggtgcg cacccgttgc ggcgtcgccg atttcgacag ggcggccagc
     3661 gccacgaacc acgccttggg catgtccacc ggcaggccga ccgggatgcc ggccaccttg
     3721 ggggtctcca ggaacggcgc gccgggatcc tggaagccgg gattggtgca ggcgatgcag
     3781 gcatagccgg catcggtgca cgagccatgg ccgttccagc gccgggtgtt gcagtcgccc
     3841 ggcgcctggg tggccttgca gcccaggttc tccatcaggc agccacggtc gctgtggcgg
     3901 gcggcgctgg ccttgaattc ataga
//
LOCUS       DATIKR010000694         3395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_95597, whole genome shotgun sequence.
ACCESSION   DATIKR010000694 DATIKR010000000
VERSION     DATIKR010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95597"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VLL76_11035"
     CDS             complement(<1..456)
                     /locus_tag="VLL76_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV30088.1"
                     /translation="MSNKIRVLIVEDSLVVRELLKHIVGSDERFDVVAAVESAEEALS
                     LLDVLEPDVISLDIRLPGMNGLDATLQIMARRPTPIVVVAAQVDDDELNIAMNALRAG
                     ALAVVEKPVGVTNQAFESMAARLCTQLAIMSQVKVMPQRIDRGLRFGTAE"
     gene            complement(453..2717)
                     /locus_tag="VLL76_11040"
     CDS             complement(453..2717)
                     /locus_tag="VLL76_11040"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV30089.1"
                     /translation="MGIRERLLAAFQVEYQEHLEAIRKLLGELAGRTEGSGIAQLDET
                     FRRAHSLKGAARAVDLLPVEKLAHKLETLFARVRSGHLRLENEVLSQVNRGLDAIEDW
                     VTAFSAGDTPPDPADTLAEIEALLGKDPAEEPAAKKAAVAVPPEFDAAIPKPPAPPPA
                     PEPIEPPKAPVVADETVRVRAVHLDRLLRTSNELLTETMNQRAVTDQLIDVDRRLAEL
                     DKQWRRLRKMSGAMARDLGDHERTSQFEKHAEALEQALRVVARQARQSRRMQQRTGWT
                     LRQLGGELQQEVRDARMVPAESVFAGFRKMVRDIARDAGKQVEVQVTGLDVEADRMVL
                     QGLKDPVMHLLRNALAHGVEMPEDREAAGKPAGAHVALRFALSEGRLVVLVEDDGRGL
                     HVEAIRRKAVEHGLFTDGEASDLDRSALVDLIFDPGFSTSRAVDDLSGRGMGLSVVRE
                     AVTMMNGTVEVQPRQPHGTCFRLSVPLSVTSQRLFLVGCHGHVYGLPTEGVDRLFRVP
                     AEAVKTVEGKSVVYLGDQQLPLLSLAHLLALGETSVKVSRNVVPLVVLKNGDRRVGIA
                     VDEFLSIREGLVKDIGVPGAVGTMVAGGMIMEDGAVALVLNPFEIVETFRKSGSIRVL
                     TTVEKPAEKRIPTILVVDDSLTTRTLEKSILEAHGYVVRLAVDGIEALSKLRAEHFDL
                     VISDVQMPRLDGFGLLQAIKGDSQLKKTPVILVTSLEAREDRERGLSLGADAYVVKRK
                     FDQKELLETVGQIL"
     gene            complement(2717..>3395)
                     /locus_tag="VLL76_11045"
     CDS             complement(2717..>3395)
                     /locus_tag="VLL76_11045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30090.1"
                     /translation="ERSRQVAGTAEAVATSGNAGLQAVHDASVGMEGIREQTETVAEN
                     IITLSERTQAVGEIIATVNDIAEQSNLVALNAAIEAADARESGRRFSVVANEIKNLAD
                     QAKEATSQVRGILEQTQKGINTSVMLTEEALKRVESGREKTNVSEQVIRQMANNIQES
                     VHAFQQIVGATNQQQIGLEQVTQALHEIRQASQQTATTTAQLEKASVELTKLGEQLAK
                     TLEKYRL"
BASE COUNT          491 a         1169 c         1138 g          597 t
ORIGIN      
        1 ctcggcggtg ccgaagcgca gaccccggtc gatgcgctgc ggcatcacct tgacctggct
       61 catgatggcc aactgggtgc acagacgcgc cgccatggat tcgaaggcct ggttggtgac
      121 gcccaccggc ttttccacca ccgccagggc gccggcgcgc aaggcgttca tggcgatgtt
      181 gagctcgtcg tcgtccacct gggcggccac caccacgatg ggggtcggcc gccgcgccat
      241 gatctgcagg gtggcgtcca ggccgttcat gccgggcagg cggatgtcga gcgagatgac
      301 gtcgggttcc agcacgtcga gcaggctcag cgcctcctcc gccgattcca cggcggcgac
      361 cacgtcgaag cgctcgtccg agccgacgat gtgcttcagc aactcgcgca ccaccagcga
      421 atcctcgacg atcaggacac ggatcttgtt gctcatagga tctgccccac cgtctccagc
      481 aattccttct ggtcgaactt gcgtttcacc acataggcgt cggcgcccag ggacaggccg
      541 cgctcgcggt cctcgcgggc ttccagcgag gtcaccagga tcaccggcgt cttcttgagc
      601 tgcgaatcgc ccttgatcgc ctgcagcagg ccgaagccgt cgaggcgcgg catctgcacg
      661 tcggagatca ccaggtcgaa atgctcggcg cgtagcttgg acaacgcctc gatgccgtcc
      721 accgccaggc ggaccacata gccgtgggct tccaggatgc tcttttccaa cgtccgcgtg
      781 gtcagcgaat cgtccaccac caggatggtg gggatgcgct tctcggccgg cttctcgacc
      841 gtggtcagca cgcggatcga gccggacttc ctgaaggtct cgacgatctc gaacggattg
      901 aggaccagcg cgacggcgcc gtcctccatg atcatgccgc cggccaccat ggtgccgacc
      961 gcgccgggca caccgatgtc cttgaccagg ccctcgcgga tggacaggaa ctcgtccacc
     1021 gcgatgccga cgcggcggtc gccgttcttc agcaccacca gcggcaccac gttgcggctg
     1081 actttgaccg aggtctcgcc caaagccagc aggtgggcca gcgacagcag cggcaattgc
     1141 tggtcgccga gatagaccac cgacttgcct tccaccgtct tcaccgcctc ggccgggacc
     1201 cggaacagtc ggtcgacgcc ttcggtcggc aggccgtaga catgcccgtg gcagcccacc
     1261 aggaacagcc gctgcgacgt caccgacagc ggcaccgaca ggcggaagca ggtgccgtgg
     1321 ggctggcgcg gctgcacctc gacggtgccg ttcatcatgg tgacggcctc gcgcaccacc
     1381 gacaggccca tgccgcgccc cgacaaatcg tccaccgcgc gcgaggtcga gaagccgggg
     1441 tcgaagatca ggtccaccaa ggccgagcgg tccaaatcgg acgcctcgcc gtcggtgaac
     1501 aggccgtgct ccaccgcctt gcggcggatg gcttcgacgt gcaggccacg tccgtcgtcc
     1561 tcgaccagca ccaccaggcg gccctcggac aaggcgaagc gcagggcgac gtgggcgccg
     1621 gcgggcttgc cggcggcctc gcggtcctcg ggcatttcga cgccatgggc cagggcgttg
     1681 cgcagcaggt gcatcaccgg gtccttgagg ccctgcagca ccatgcggtc ggcctcgacg
     1741 tcgaggccgg tgacctgtac ctcgacctgc ttgccggcgt cgcgggcgat gtcgcgcacc
     1801 atcttgcgga agccggcgaa cacgctttcc gccggtacca tgcgggcgtc gcgcacctcc
     1861 tgctgcaact cgccgcccaa ttggcgcaag gtccagccgg tgcgctgctg catgcggcgc
     1921 gactggcggg cctggcgggc gaccacgcgc agcgcctgct ccaacgcctc ggcatgcttt
     1981 tcgaactgcg aggtgcgctc gtggtcgccg aggtcgcggg ccatggcgcc cgacatcttc
     2041 cgcagccggc gccattgctt gtcgagttcg gccagccggc ggtccacgtc gatcaactgg
     2101 tcggtgaccg cccgctggtt catggtctcg gtcagcagct cgttcgacgt gcgcagcagg
     2161 cggtcgagat ggacggcgcg cacccgcacg gtttcgtccg ccaccaccgg cgccttgggc
     2221 ggctcgatcg gctccggcgc gggcggcggc gcgggtggct tggggatggc tgcgtcgaat
     2281 tccggcggca cggccacggc cgccttcttg gcggcaggct cctcggccgg gtccttgccc
     2341 agcagtgcct cgatctcggc cagggtgtcg gcggggtccg gcggcgtgtc gccggcggaa
     2401 aaggcggtga cccaatcctc gatggcgtcc aggccccggt tgacctgcga cagcacctcg
     2461 ttctccagcc tgagatggcc ggaacggacg cgggcgaaca gggtttccag cttgtgcgcc
     2521 agcttttcca ccggcaacag gtcgacggcg cgggccgcgc ccttcagcga atgggcgcgg
     2581 cgaaaggttt catccaattg ggcgatgccg ctgccttccg tccgccccgc cagttcgccc
     2641 agcaatttgc ggatggcttc caggtgttcc tgatattcca cctggaaggc ggcgagcagc
     2701 ctttcgcgga tgcccatcaa agccggtatt tctccaacgt cttggccagt tgctcaccca
     2761 gcttggtcag ctcgaccgag gccttttcca gttgcgccgt ggtggtggcg gtctgctggc
     2821 tggcctggcg gatttcgtgc aaggcctgcg tcacctgttc caggccgatc tgctgctggt
     2881 tggtggcgcc gacgatctgc tggaaggcgt ggacgctttc ctggatgttg ttggccatct
     2941 ggcggatgac ctgctcggac acgttggtct tctcgcgccc cgattcgacg cgcttgagcg
     3001 cctcttcggt cagcatcacc gaggtgttga tgcccttctg ggtctgctcg aggatgccgc
     3061 gcacctgcga ggtcgcctcc ttggcctggt cggccaggtt cttgatctcg ttggcgacca
     3121 ccgagaagcg gcggccggat tcgcgggcgt cggcggcctc gatggcggcg ttcagagcca
     3181 ccaggttgga ttgttcggcg atgtcgttga cggtggcgat gatctcgccc accgcctggg
     3241 tgcgctcgga cagggtgatg atgttctcgg ccaccgtctc ggtctgctcg cggatgcctt
     3301 ccatgccgac cgaggcatcg tgcaccgcct gcaggccggc attgcccgag gtggcgaccg
     3361 cctcggcggt gccggcgacc tggcgcgacc gctcg
//
LOCUS       DATIKR010000695         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_167718, whole genome shotgun sequence.
ACCESSION   DATIKR010000695 DATIKR010000000
VERSION     DATIKR010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167718"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="VLL76_11050"
     CDS             complement(<1..808)
                     /locus_tag="VLL76_11050"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV30091.1"
                     /translation="MAGELNGKTILITGGAGMLGRAFAEVLAGYPCNVVAKSHEELDV
                     TDRDAVMAERADVIVHCAADVNAERCEDDPAQTRRVQVDGARNVADLARATGARLFYP
                     QSFLIFDGKHLPISEHTPPAPLSVYGRCKLEAEQVLMQVPGTIVVRMAGFFGGEEKDK
                     NFVGLFTRKIAQLLAEGVDHYAVGDRVWQPTWTVDLARNSALLLDEGKTGLYTMSCHG
                     EASFWELAAACVEELGIGHRMRIDKVSAAQVARAEKAKRPDRAVMDNRRLR"
     gene            complement(816..1766)
                     /locus_tag="VLL76_11055"
     CDS             complement(816..1766)
                     /locus_tag="VLL76_11055"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV30092.1"
                     /translation="MRKLISIVTPVYNEEGNVEECAKMVRALFDDGGPLAAYDLEHIF
                     ADNCSTDATVPALRKLAEADKRVKVILNARNFGPFRSTFNALKSANGDAVVPLLAADL
                     QDPVEMIADFVRLWEDGFEVVQGVRETREEGRVMVAIRRLYYRSVSALSSVNVPPNVG
                     EFQLIDRKVVEALKQHDDYYPYIRGMIARCGFRVTGLPYRVQARKRGMSKNRMWHLVD
                     QGLNGVISTSNVPLRISMIAGLALSALSIVYALLQLLINLVFWRELSAPGIAQLTVAI
                     FFFSGVQLFFIGLLGEYIGAIHSQVRGGPLVVERERINFQ"
     gene            complement(1754..1966)
                     /locus_tag="VLL76_11060"
     CDS             complement(1754..1966)
                     /locus_tag="VLL76_11060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30093.1"
                     /translation="MRAIAEDVRDAVDPALALGFGEVPTPPGPAHLEADVARLAALGW
                     APAISWKTGLAQTVAWHREQASSCGN"
BASE COUNT          334 a          697 c          723 g          316 t
ORIGIN      
        1 cgcgcaggcg gcgattgtcc atcacggcgc ggtcgggccg cttggccttc tcggcgcggg
       61 ccacctgggc ggcggagacc ttgtcgatgc gcatgcggtg gccgatgccc aattcctcga
      121 cgcaggcggc ggccagttcc cagaacgacg cctcgccgtg gcacgacatg gtgtagaggc
      181 cggtcttgcc ctcgtccagc agcagcgccg agttgcgcgc cagatccacc gtccaggtcg
      241 gctgccacac gcggtcgccg acggcgtaat ggtccacgcc ctcggccagc aattgggcga
      301 tcttgcgggt gaacaggccg acgaaattct tgtccttctc ctcgccgccg aagaagccgg
      361 ccatgcgcac cacgatcgtg cccggcacct gcatcagcac ctgctcggcc tcgagcttgc
      421 agcggccata gaccgacagc ggcgccggcg gagtgtgctc ggagatcggc aggtgcttgc
      481 cgtcgaagat caggaaggat tgcggataga acaggcgggc gccggtggcg cgggccaggt
      541 cggcgacgtt gcgggcgccg tcgacctgga cgcggcgggt ctgcgcggga tcgtcctcgc
      601 agcgctcggc gttgacgtcg gcggcgcagt ggacgatgac gtcggcccgt tcggccatca
      661 ccgcgtcgcg gtcggtgacg tccaactcct cgtgggactt cgccaccaca ttgcagggat
      721 agcccgccag cacctcggcg aaggcgcggc ccagcatgcc ggcgccgccg gtgatcagga
      781 tggtcttgcc gttcagctca cccgccacga tgccctcact ggaaattgat gcgttcgcgc
      841 tcgaccacca gcggcccgcc gcgcacctgg ctgtggatgg cgccgatgta ttcgcccagc
      901 aggccgatga agaacagctg gacgcccgag aagaagaaga tcgccaccgt caactgggcg
      961 atgccggggg ccgacagctc gcgccagaac accaggttga tcagcaattg cagcagcgcg
     1021 tagacgatgc tgagcgccga caacgccagc ccggcgatca tgctgatgcg caacggcacg
     1081 ttcgaggtcg agatgacgcc gttcaggccc tggtcgacca ggtgccacat gcggttcttc
     1141 gacatgccgc gcttgcgggc ctggacgcga tagggcaggc cggtgacgcg gaagccgcag
     1201 cgggcgatca tgccgcggat atagggataa tagtcgtcgt gctgcttcag cgcctcgacc
     1261 accttgcggt cgatcaactg gaactcgccg acgttgggcg gcacgttgac cgaggacagc
     1321 gccgacaccg agcggtaata gaggcggcgg atcgccacca tgacgcggcc ttcctcgcgg
     1381 gtctcgcgca cgccctggac gacctcgaag ccgtcctccc acagccgcac gaaatcggcg
     1441 atcatctcga ccgggtcctg caggtcggcc gcgagaagcg gcaccacggc gtcgccattg
     1501 gccgatttca gggcgttgaa ggtggagcgg aaggggccga aattgcgggc gttgaggatc
     1561 accttcaccc gcttgtcggc ctcggccagc ttgcgcagcg ccggcacggt ggcgtcggtc
     1621 gagcaattgt cggcgaagat gtgctccagg tcataggccg ccaacggccc gccgtcgtcg
     1681 aacagggcgc gcaccatttt ggcgcattcc tcgacgttgc cctcctcgtt gtagacgggg
     1741 gtgacgatgc tgatcagttt ccgcatgacg acgcttgctc cctgtgccac gccaccgtct
     1801 gggcgaggcc ggtcttccat gaaatcgcgg gcgcccaccc cagcgcggca aggcgcgcca
     1861 cgtcggcctc cagatgggcg gggccgggcg gcgtcggcac ttcgccgaaa ccgagcgcca
     1921 gcgccggatc gacggcgtcg cgcacgtcct cggcgatggc gcgcacggtg cgcggctggc
     1981 cgagcgatgg cggcggcggc gtcgtccacg tgcagcaggt cgaacacctg ggtgccggcg
     2041 gtcagggccg ggcgctcgcc gcgcagcagc
//
LOCUS       DATIKR010000696         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_10526, whole genome shotgun sequence.
ACCESSION   DATIKR010000696 DATIKR010000000
VERSION     DATIKR010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10526"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1557
                     /locus_tag="VLL76_11065"
     CDS             <1..1557
                     /locus_tag="VLL76_11065"
                     /inference="COORDINATES: protein motif:HMM:NF014692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase iron-sulfur subunit"
                     /protein_id="HSV30094.1"
                     /translation="IEDVGAIVIATGWRPYDATKLGHLGYGASPDVVTNVDFEKMLAK
                     NELARKSDGKPPKSIAFVQCAGSRDPDHLPYCSSVCCATSLKQALEVIDKDPAANVYV
                     IYEEMRTPGVAEELYRSAQKAGVIFIKGKVKGVGADLTVTVADELVQEDVPLAGLDMV
                     VLATGMVPNSTVPGAEASDKGAEQLAGDVDPEAPIKVAGYAGEAPAEYAKRTQCTPEG
                     GPLLNLQYRQGPHLPVLHDGFADSHYICFPYETRRTGIYTCGPVRRPMDWAEAAEDAA
                     GAVLKAVQAVRNAAAGAALHPRVGDLSYPKINLNQCTKCRRCTVECPFGAIDEDEKEY
                     PQVNSTRCRRCGTCMGACPVRTISFDNYSVEMLTTQIKSVKIPDEFSGKPRLLIIACE
                     NDAIPALDMAGIKRNQWSAHVRVLPVRCLGSVSLLCVSDALSVGYDGVMLMGCKPGDD
                     YQCHFVKGSAMAAERMGKVGETLKSMMLEPERVVQVEASIADSDRLPKVIDGFVEQIT
                     AIGFNPFKGF"
     gene            1561..2172
                     /locus_tag="VLL76_11070"
     CDS             1561..2172
                     /locus_tag="VLL76_11070"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV30095.1"
                     /translation="MNAISPNPTKKYDLNFARWVYDNVDGGDRMALCMQCGTCSGSCP
                     IGTQMDHGPRKLFMMIRAGMKEAVLTSNTLWNCVSCYNCVVRCPRQVPVTYILHDLAT
                     VAVREGYAQARESDNARFAKAFWWSAAKWGRTDERLVTAKYYFSFGMGEGYKKGMANL
                     PIAMGMVKTKRMHLGMPHKCKNTGELSKILAKAAEIEATKHGK"
BASE COUNT          409 a          760 c          718 g          348 t
ORIGIN      
        1 atcgaggacg tcggcgccat cgtcatcgcc accggctggc ggccctatga cgccaccaag
       61 ctggggcatc tcggctacgg cgcctcgccc gacgtggtga ccaacgtcga cttcgagaag
      121 atgctggcga agaacgagtt ggcgcggaag tcggacggca agccgccgaa atccatcgcc
      181 ttcgtgcaat gcgccggctc gcgcgatccc gaccacctgc cgtattgctc cagcgtgtgc
      241 tgcgccacct cgctgaagca ggcgctggag gtgatcgaca aggacccggc cgccaacgtc
      301 tacgtgatct acgaggagat gcgcaccccc ggcgtggccg aggagctgta ccgctcggcc
      361 cagaaggcgg gcgtcatctt catcaagggc aaggtcaagg gcgtcggtgc cgacctcacc
      421 gtcaccgtcg ccgacgaact ggtgcaggaa gacgtgccgc tggccggcct cgacatggtg
      481 gtgctggcga ccggcatggt gcccaactcc accgtccccg gtgccgaggc ctccgacaag
      541 ggcgccgagc aactggccgg cgacgtcgat cccgaggcgc ccatcaaggt ggccggctat
      601 gccggcgagg cgccggccga atacgccaag cgcacccaat gcacgcccga gggcgggccg
      661 ctcttgaacc tgcaataccg ccagggtccg catctgccgg tgctgcatga cggcttcgcc
      721 gactcgcact acatctgctt cccgtacgag acccggcgca ccggcatcta cacctgcggt
      781 cccgtccgtc gtccgatgga ctgggccgag gccgccgagg acgccgccgg cgcggtgctg
      841 aaggcggtgc aggcggtgcg caacgcggcg gccggcgcgg ccctgcatcc gcgcgtcggc
      901 gacctgtcct atcccaagat caacctcaac cagtgcacca agtgccgccg ctgcacggtg
      961 gaatgcccgt tcggcgccat cgacgaggac gagaaggaat atccgcaggt caattccacg
     1021 cgctgccgcc gttgcggcac ctgcatgggc gcctgcccgg tgcgcaccat cagcttcgac
     1081 aattactcgg tcgagatgct gaccacccag atcaagtcgg tgaagatccc cgacgagttc
     1141 tcgggcaagc cgcgcctgtt gatcatcgcc tgcgagaacg acgccatccc ggcgctcgac
     1201 atggccggca tcaagcgcaa ccagtggagc gcccatgtgc gcgtgctgcc ggtgcgctgc
     1261 ctgggctcgg tcagcctgct gtgcgtctcc gatgcgctgt cggtgggcta tgacggcgtc
     1321 atgctgatgg gctgcaagcc cggcgacgac tatcagtgcc acttcgtcaa gggctcggcc
     1381 atggccgccg agcgcatggg caaggtgggc gagacgctga agtccatgat gctggaaccc
     1441 gagcgcgtgg tgcaggtgga agcctccatc gccgattccg accgtctgcc caaggtgatc
     1501 gacggcttcg tcgagcagat caccgccatc ggcttcaatc cgttcaaggg gttctgagcc
     1561 atgaacgcca tttcccccaa cccgaccaag aagtacgacc tcaacttcgc ccgctgggtc
     1621 tacgacaacg tggacggcgg cgaccgcatg gctttgtgca tgcagtgcgg cacctgctcg
     1681 ggctcgtgcc ccatcggcac ccagatggac cacggcccgc gcaagctgtt catgatgatc
     1741 cgcgccggca tgaaggaagc ggtgctgacc tcgaacacgc tgtggaattg cgtgtcgtgc
     1801 tacaattgcg tcgtccgctg cccgcgccag gtgccggtga cgtacatcct gcacgacctc
     1861 gccaccgtgg cggtgcggga aggctatgcc caggcccgcg agtccgacaa cgcccgcttc
     1921 gccaaggcgt tctggtggtc ggccgccaaa tggggccgca ccgacgaacg cctggtcacc
     1981 gccaagtact atttcagctt cggcatgggc gagggctaca agaagggcat ggcgaacctt
     2041 cccatcgcca tgggcatggt gaagaccaag cgcatgcatc tgggcatgcc ccacaagtgc
     2101 aagaacaccg gcgagctgtc gaagatcctg gccaaggcgg ccgagatcga agcgaccaag
     2161 cacggcaagt aagggaacgc cccgccatga ccaagaccat gtcgtattac ccgggatgca
     2221 gctcgcaggc ttccg
//
LOCUS       DATIKR010000697         1871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_119143, whole genome shotgun sequence.
ACCESSION   DATIKR010000697 DATIKR010000000
VERSION     DATIKR010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119143"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /gene="hemN"
                     /locus_tag="VLL76_11075"
     CDS             complement(<1..980)
                     /gene="hemN"
                     /locus_tag="VLL76_11075"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HSV30096.1"
                     /translation="MRADLAAKYDLRVPRYTSYPTAPHFHPGIGADTYRKWLGELDAA
                     EELSLYLHIAYCAEMCWFCGCHTKITKRYAPVAAYMDSLWGEVALVAEALPTRMTARH
                     IHFGGGSPTILSSEDFVRTIDLLREKFAVKPDAEVAVELDPRTADEDYVKAMAGAGVT
                     RASIGVQDFDPKVQQAINRIQPYQVTADVIGWLTKYGVPEINIDLVYGLPHQTLDGLI
                     DTIDKAVEFGPKRIALFGYAHVPWMKKHQRLIPDETLPGTEARWQQYEQGCARLVDHH
                     GYVQIGLDHFAAPDDPMAIALKANKLHRNFQGYTTDTADTLIGFGASGIGS"
     gene            1323..>1871
                     /locus_tag="VLL76_11080"
     CDS             1323..>1871
                     /locus_tag="VLL76_11080"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HSV30097.1"
                     /translation="MRRTLTRAVPLALLALGGCAPAMVTSNVEPAFSAPVTNNDTPYT
                     TCLSALGQLPGSNLPTFAVGEVADKTGQFQATGNGTSTALSQGVSEMVMSALYKTGKA
                     RLVERYDLRIPLAQVKMAEQKLTGAEAALRPGAIRGSDFVLVGALTELNYNIVSGGAR
                     LAIGGIGGGARSVVINVGLDLRV"
BASE COUNT          305 a          589 c          652 g          325 t
ORIGIN      
        1 gagccgatgc ccgaggcgcc gaagccgatc agggtgtcgg cggtgtcggt ggtgtagccc
       61 tggaagttgc gatgcagctt gttggccttc agcgcgatgg ccatgggatc gtcgggcgcc
      121 gcgaagtggt cgaggccgat ctggacgtag ccgtgatggt ccaccagccg ggcgcagccc
      181 tgctcgtatt gctgccagcg cgcctcggtg ccgggcaggg tctcgtcggg gatcaggcgc
      241 tggtgcttct tcatccacgg cacgtgggca tagccgaaca gggcgatgcg cttggggccg
      301 aattccaccg ccttgtcgat ggtgtcgatc aggccgtcca gggtctggtg cggcaggccg
      361 tagaccaggt cgatgttgat ctcgggcacg ccgtacttgg tcagccagcc gatgacgtcg
      421 gcggtgacct gatagggctg gatgcggttg atggcctgct ggaccttggg gtcgaaatcc
      481 tgcacgccga tcgaggcgcg ggtgacgccg gcgccggcca tggccttgac gtagtcctcg
      541 tcggcggtac gcgggtccag ttcgaccgcg acctcggcgt cgggcttgac cgcgaacttc
      601 tcgcgcagca ggtcgatggt gcggacgaaa tcctcggacg acaggatggt cgggctgccg
      661 ccgccgaaat ggatatggcg ggcggtcatg cgggtcggca gggcctcggc caccagggcg
      721 acctcgcccc acagcgaatc catgtaggca gccaccggcg cgtaacgctt ggtgatcttg
      781 gtgtggcagc cgcagaacca gcacatctcg gcgcaatagg cgatgtgcag gtacagcgac
      841 aattcctcgg ccgcatccaa ctcgcccagc cacttgcggt aggtgtcggc accgatgccg
      901 ggatggaagt gcggcgcggt ggggtacgac gtgtagcgcg ggacccgaag gtcgtacttg
      961 gcggcgagat cggcgcgcat tcgctctctt tcctgctgac tccgaacggg aaccctaccg
     1021 cgacccccgc ctccatttca acaacgccca gggtggggct ttgcttccgc tccccttcgg
     1081 ggccgggggc tatccggatg gggcgcgaaa cggcgcatcc ggttgttcct tggcgccggc
     1141 ggattacttc gccgagtaat gtaaaccaca ccgaaaggac gttacagttt tcgccatgaa
     1201 gcgagtaggg tctgcctcac caagcaaccg ccccaaagaa gacacagcaa aaaccgcaga
     1261 gcttccttag cgccccctga gtggcgaacg gtttttcttt gtctggtttc gaggagagcg
     1321 agatgagacg gaccctcacg cgcgctgttc cactggcgct cttggcgctg ggcggctgcg
     1381 cccccgccat ggtgaccagc aacgtggagc cggcgttcag tgccccggtc accaacaacg
     1441 acacgcctta cacgacctgc ctgtcggccc tcggccagct tcccggcagc aacctgccga
     1501 ccttcgcggt gggcgaggtg gccgacaaga ccgggcagtt ccaggccacc ggcaacggca
     1561 cctcgacggc gctgtcgcag ggcgtgtcgg aaatggtgat gagcgccttg tacaagacgg
     1621 gcaaggccag gctggtcgag cgctacgacc tgcgcatccc gctggcccag gtcaagatgg
     1681 cggaacagaa gctgacgggg gcggaagcgg ccctgcggcc cggcgccatc cgcggctcgg
     1741 acttcgtgtt ggtcggggcg ctgaccgagc tcaactacaa catcgtctcg ggcggtgccc
     1801 gccttgccat cggcggcatc ggcggcggcg cccgctcggt ggtgatcaat gtcggcctcg
     1861 acctgcgggt g
//
LOCUS       DATIKR010000698         5511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_58319, whole genome shotgun sequence.
ACCESSION   DATIKR010000698 DATIKR010000000
VERSION     DATIKR010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5511
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58319"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1097
                     /locus_tag="VLL76_11085"
     CDS             <1..1097
                     /locus_tag="VLL76_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSV30098.1"
                     /translation="EVRAATAPTTPKPARRKSPRQWWEQAQPASFAPGAVEQPPGRVV
                     KAQAQAVEPQQAAADVPPDQAPPGVLTRQGVLVVEPSIEYTHTDINRFVVGGVAILDT
                     VLVGSIEASQADRDSVTATMGLRYGITDRIEAEVRVPYMYRNDSVTNTVVSGAGAPQS
                     TSLDDHGLGDVEAALHWQVNDGGGSWPFLVTNLRVKSTTGDGPFDVGRNAQGIEEELA
                     TGSGFWGVEPSLTIIAPSDPAVFYGNIGYLWNVKDSVDKTVANNRFIRDVDPGDAVRV
                     GFGMGLALNEKVSFSVGYQHDFIMSTKTEFADGDFESESLSVGSLTLGVNWQMTDTTA
                     LNVNVGIGVTEDAPDVRVMARVPIAIDLFR"
     gene            complement(1240..1794)
                     /locus_tag="VLL76_11090"
     CDS             complement(1240..1794)
                     /locus_tag="VLL76_11090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30099.1"
                     /translation="MTRLACLTAAAVIAATALPDHAYAMTPPGDPFADFETVGRAELG
                     DLRGGMMINGIPVDFAVVIRTTVEGALAANGLQTTVAVNDQGGIGAISTAAIGADGAV
                     AGGGPSGVTMTLNGGGTSILHQVIDGQVQAMIANTVDRATISHQTQVNVTMPGFNEMT
                     RTYFAHSHANALSRDSVMVGLGRF"
     gene            complement(1829..2518)
                     /locus_tag="VLL76_11095"
     CDS             complement(1829..2518)
                     /locus_tag="VLL76_11095"
                     /inference="COORDINATES: protein motif:HMM:NF015377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HSV30100.1"
                     /translation="MTKRSSAALAAVILLAATQALAGEARLTIPGGSVGVTVTSLKEA
                     RFKSVVRQQYDFSCGSAAIATLLTYHYGRPIGEEEAFRSMFAVGDQQAIQKYGFSLAD
                     MQRYLSTLGLRSDGFRVTLDKYVQVGVPAITLISTKGYNHFVVIKGIRGGDVLVGDPA
                     LGLKAIPRAEFEAMWQGVVFVVRDDLESGRDGFNRDDEWAVRRKVPFGTALNRHGLST
                     FAVALPGLFEF"
     gene            complement(2532..2888)
                     /locus_tag="VLL76_11100"
     CDS             complement(2532..2888)
                     /locus_tag="VLL76_11100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30101.1"
                     /translation="MHRATAFALGLALAGWTGAAFAQDPFDQVAPIAEAELGGQRGGT
                     ETAPDISGSVIQTNDTNQSGTNNGNISIGANAAKISGSIREATVTGNHGVTAVMQNTG
                     DLVNMNNATSVNVFLQ"
     gene            complement(2961..4514)
                     /locus_tag="VLL76_11105"
     CDS             complement(2961..4514)
                     /locus_tag="VLL76_11105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30102.1"
                     /translation="MKKSLVTGVSAAAMLFAFSAQASGLIGQKQGFALENNQGQTQGM
                     KTLADGGNASAKASGGDAGGGGHPGNHNNDGPYSMSYGGKSGGGDGGYAKAYGEGGDA
                     YAKGYQDQGQEQSLVGHQEQVVVLPDITVNVPAPTPSSGGGGAAGPRGDGDSNTVSGE
                     NNRNLSHNAEDDAIIADRGARVARQIEGTAILGDNVNLDSFNVTMNNVTDMSATNTVG
                     PISLDSGNANGGRLYGGDNDIDLDADVETEGNAGDADANIGSTTGGRGGNGGNGTAVT
                     ANVGLQSAKSKNKTEGGDGSAYSKAYGASVALSAAKSGAKSYSKNYGKSENDVEADAE
                     AAPGNGGGWNAPSLRSGSHHKRGSGDALAKADAGGESSLFQKAKSNSEAGAWGKSNAT
                     TKQNPQANAAGGAAGAIDSKTGNMLDQEGKAMAAGGDGAAGGDAKAMSMAKGGDNAQM
                     ASSKQTVNAATGATTGANGGSVSVAFGTGSIGAISLGTVHGIASVAQNSGLSANQFTA
                     FSINAHTNF"
     gene            complement(4737..>5511)
                     /locus_tag="VLL76_11110"
     CDS             complement(4737..>5511)
                     /locus_tag="VLL76_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30103.1"
                     /translation="ADGTAPDVKAAIEHSLMRALSGKMPLRSAEPEQEIQAVFDLFRR
                     MWVGNSMIGGAKALAMLERRQARHINNETVTDLLRERKVLADRVAFLMVLAGIAVGQA
                     NRTTLKTFIDHYFGDKDFVPRVVAGQDAPVPKLQTLTQTHRAIRSSWLGDDDKAAAMA
                     RVEAAQAELLKRSRLFEQVDRKGGGPAQKLLTLVELCRKNTFIEGPVLDSVKTAIVGY
                     LKDPQFVPDYLGGAQGEERERKIQLLSRTLATFTIQWGA"
BASE COUNT          756 a         1824 c         1946 g          985 t
ORIGIN      
        1 aggaggtgcg cgcggcgacg gcgccgacca cgcccaagcc ggcgcggcgc aaatccccgc
       61 gccagtggtg ggagcaggcg cagcccgcat ccttcgcgcc gggcgccgtt gagcaaccgc
      121 ccggccgcgt cgtcaaggcc caggcccagg cggtcgagcc gcagcaggcc gccgccgatg
      181 tgccgcccga ccaggcgccg ccaggggtgc tgacccgcca gggcgtgctg gtggtcgagc
      241 cgtccatcga atacacccac accgacatca accgcttcgt ggtcggcggc gtcgccatcc
      301 tcgacaccgt gctggtcggc tcgatcgagg ccagccaggc cgaccgtgat tcggtcaccg
      361 cgaccatggg cttgcgctac ggcatcaccg accgcatcga ggccgaggtc agggtgccct
      421 acatgtaccg caacgacagc gtcaccaaca cggtggtcag cggtgccggc gcgccccagt
      481 ccaccagcct ggacgaccac ggcctgggcg acgtcgaggc ggcgctgcat tggcaggtca
      541 acgacggcgg cggctcgtgg ccgttcctgg tgaccaacct gcgcgtcaag agcaccaccg
      601 gcgacggccc gttcgacgtc ggccgcaacg cccagggcat cgaggaggaa ctggccaccg
      661 gctcgggctt ctggggtgtc gagccgtcgc tgaccatcat cgcaccgtcg gacccggcgg
      721 tgttctacgg caacatcggc tatctgtgga acgtcaagga ctcggttgac aagaccgtcg
      781 ccaacaaccg tttcatccgc gacgtcgatc ccggcgacgc cgttcgggtc ggcttcggca
      841 tgggcttggc gctgaatgaa aaggtttcgt tctcagtggg ttaccagcac gacttcatca
      901 tgagcaccaa gaccgaattc gccgatggcg acttcgagtc ggagtcgctg tcggtcggct
      961 cgctgaccct gggtgtcaac tggcagatga cggacaccac ggcgctcaac gtcaacgtcg
     1021 gcatcggcgt caccgaggat gcccccgacg tccgcgtcat ggcccgcgtg ccgatcgcca
     1081 tcgatctgtt caggtgactt gttcttcgcc gcccccgggc tttggtccgg gggcgcacca
     1141 ggaaaagccg tcatccccgc gaaagcgggg atccatgctt ggtgaggctg actggtggat
     1201 gcatggattc ccgctttcgc gggaatgacg gcttcaggcc tagaaccgtc ccaatccgac
     1261 catcaccgaa tcgcggctca gcgcgttggc gtggctgtgg gcgaagtagg tgcgggtcat
     1321 ctcgttgaag cccggcatgg tgacgttgac ctgggtctgg tgcgagatgg tggcgcggtc
     1381 cacggtgttg gcgatcatcg cctggacctg gccgtcgatg acctggtgca ggatcgaggt
     1441 gccgccgccg ttgagcgtca tggtgacgcc cgacgggccg ccgccggcga cggcgccgtc
     1501 ggcgccgatg gcggcggtcg agatggcgcc gattccgccc tggtcgttga cggcgacggt
     1561 ggtttgcagg ccgttggcgg ccagtgctcc ttcgaccgtg gtgcggatga ccacggcgaa
     1621 atccaccggg atgccgttga tcatcatgcc gccgcgcagg tcgcccagct cggcgcgacc
     1681 gacggtttcg aaatcggcga acgggtcgcc gggtggcgtc atggcgtagg cgtggtcggg
     1741 cagggcggtc gccgcgatca cggcggccgc cgtcaggcag gccagtctgg tcatgtcggt
     1801 tctccccgtc gttccatggg ttggtccgtc agaactcgaa gagtccgggc agcgcgaccg
     1861 cgaaggtcga cagcccatgg cggttcaacg cggtgccgaa cggcaccttg cggcgcaccg
     1921 cccattcgtc gtcacgattg aagccgtcgc ggccggattc caggtcgtcg cgcacgacga
     1981 acaccactcc ctgccacatg gcctcgaact cggccctggg gatggctttg agccccaggg
     2041 cggggtcgcc caccagaacg tcgccgcccc ggattccctt gatgaccacg aagtggttgt
     2101 agcccttcgt gctgatcagg gtgatggccg gaacgccgac ctggacgtat ttgtcgagcg
     2161 tcacccggaa cccgtccgag cgcagcccga gcgtgctcag gtaccgctgc atgtcggcca
     2221 gcgagaagcc gtatttctgg atcgcctgct ggtcgcccac ggcgaacatc gagcggaagg
     2281 cttcctcctc gccgatgggg cggccgtaat gataggtcag caaggtggcg atggccgccg
     2341 agccgcacga gaaatcgtat tgctggcgga ccacgctctt gaagcgggct tccttgaggc
     2401 tggtcacggt cacgccgacg ctgccgcccg gaatggtgag cctggcctcg ccggccaggg
     2461 cctgggtcgc cgccaacagg ataacggcgg ccagggccgc cgagcttcgc ttggtcatgg
     2521 ccgtcgcctc gtcattgcag gaagacgttg acgctggtgg cgttgttcat gttcaccagg
     2581 tcgccggtgt tctgcatcac ggcggtgacg ccatggttgc cggtcaccgt cgcctcgcgg
     2641 atcgagccgc tgatcttggc ggcgttggcg ccgatgctga tgttgccgtt gttggtgccg
     2701 ctctggttgg tgtcgttggt ctggatcacg ctgccgctga tgtcgggagc ggtctcggtg
     2761 ccgccgcgct gcccgcccag ttcggcctcg gcgatggggg ccacctggtc gaacgggtcc
     2821 tgcgcgaagg ccgctccggt ccagcccgcc agggccaggc cgagggcgaa tgccgttgct
     2881 ctgtgcatct ccttccttct ccttcgatgg ctcgggaaga ggagccggcg ggccccaagg
     2941 gaacccgccg gccggaggcg ttagaagttg gtgtgggcgt tgatgctgaa ggcggtgaac
     3001 tggttcgccg acaggcccga gttctgggcg accgaggcga tgccgtgcac cgtgcccagg
     3061 ctgatggcgc cgatcgagcc ggtgccgaag gcgaccgaca cgctgccgcc attggccccc
     3121 gtggtggcgc cggtggcggc gttcacggtc tgcttggacg acgccatctg ggcgttgtcg
     3181 ccgcccttgg ccatggacat ggccttggcg tcgccgccgg ccgcgccgtc gccgccggcc
     3241 gccatggcct tgccttcctg gtccagcatg ttgccggtct tgctgtcgat cgcaccggcg
     3301 gcgccgccgg ccgcgttggc ctgcgggttc tgcttggtgg tggcgttcga cttgccccag
     3361 gcgccggcct cggaattgga cttggccttc tggaacaggc tcgattcgcc gccggcatcg
     3421 gccttggcga gagcatcgcc gctgccgcgc ttgtggtgcg agccgctgcg caggctgggg
     3481 gcattccacc cgccgccgtt gccgggggcc gcttcggcat cggcctccac gtcgttctcg
     3541 gacttgccgt agttcttcga gtacgacttg gcgcccgact tggcggccga cagcgcgacc
     3601 gaggcgccgt aggccttgct gtaggcggag ccgtcgccgc cttcggtctt gttcttcgac
     3661 ttggcgcttt gcaggcccac attggcggtc acggcggtgc cgttgccgcc gttgccgccg
     3721 cggccgccgg tggtgctgcc gatgttggcg tcggcgtcgc cggcgttgcc ctcggtctcg
     3781 acatcggcat cgaggtcgat gtcgttgtcg ccgccgtaca gacggccgcc gttggcgttg
     3841 ccgctatcca gcgagatggg gccgacggtg ttggtggcgc tcatgtcggt gacgttgttc
     3901 atcgtcacgt tgaacgagtc gaggttgacg ttgtcgccca ggatggcggt accctcgatc
     3961 tggcgggcga cgcgggcgcc acggtcggcg atgatggcgt cgtcctcggc gttgtgcgag
     4021 aggttgcggt tgttctcgcc cgagacggtg ttggaatcgc cgtcgccgcg cgggccggcc
     4081 gcaccaccgc cgccgctgct gggggtgggg gcggggacgt tgacggtgat gtccgggagc
     4141 acgaccacct gctcctggtg gccgaccagc gactgctcct ggccctggtc ctggtagccc
     4201 ttggcatagg cgtcgccgcc ctcgccatag gccttggcgt agccgccgtc gccaccgccc
     4261 gacttgccgc catagctcat gctgtagggg ccgtcgttgt tgtggttgcc gggatggccg
     4321 ccgccgccgg cgtcgccgcc cgaggccttg gcgctggcgt tgccgccgtc ggccagggtc
     4381 ttcatgccct gggtctggcc ctggttgttc tcaagcgcga agccctgctt ctggccgatc
     4441 aggccgctgg cctgggccga gaacgcaaac agcatggccg cggcggacac gcccgtcact
     4501 aaagacttct tcatttcgcc tcctcttggc attgcctacg aagtcgacgt tcgctaggac
     4561 ccgggcggcc gatctcatcc ggccggtctg ggcgccatca tggaaggcaa ggggcgtgcc
     4621 aagtcgtgcc gcacctgcga aggccttggc ggcaaacgag aaacgcccgg acagggccgg
     4681 gcgcgggcag gggcaaagtg tatcggcggc gcgaaaccgt gttcaccgat gatacgtcag
     4741 gcgccccact ggatggtgaa ggtcgccagc gtccgcgaca gcaactggat cttgcgctcg
     4801 cgctcctcgc cctgggcgcc gcccaggtag tcggggacga attgcgggtc cttgagatag
     4861 cccacgatgg cggtcttcac cgaatccagc accggcccct cgatgaaggt gttcttgcgg
     4921 cagagttcga ccagggtcag cagcttctgg gccggcccgc cgcccttgcg gtccacttgc
     4981 tcgaacaggc gcgagcgctt cagcagctcg gcctgggccg cttccacccg ggccatggcg
     5041 gcggccttgt cgtcgtcgcc cagccatgac gaacggatgg cgcggtgggt ctgggtcagc
     5101 gtctgcagct tgggcaccgg cgcgtcctgg ccggcgacga cgcgcggcac gaaatccttg
     5161 tcgccgaaat aatggtcgat gaaggtcttc agtgtggtcc ggttggcctg gcccacggcg
     5221 atgccggcca gcaccatcag gaaggcgacg cggtcggcca gcaccttgcg ctcgcgcagc
     5281 aggtcggtga cggtctcgtt gttgatgtgc cgggcctggc gccgttccag catggccagg
     5341 gccttggcgc cgccgatcat gctgttgccg acccacatgc ggcggaacag gtcgaacacc
     5401 gcctggatct cctgctccgg ctcggccgag cgcagcggca tcttgcccga cagggcgcgc
     5461 atcagggaat gctcgatggc ggccttgacg tcgggggcgg tgccgtcggc g
//
LOCUS       DATIKR010000699         2761 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_131337, whole genome shotgun sequence.
ACCESSION   DATIKR010000699 DATIKR010000000
VERSION     DATIKR010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131337"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..167)
                     /locus_tag="VLL76_11115"
     CDS             complement(<1..167)
                     /locus_tag="VLL76_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV30104.1"
                     /translation="MTAPTPLMAGKKGLIMGVANDRSIAWGIAALARAHGAELAFTYQ
                     GEALEKRVRPLA"
     gene            276..1520
                     /locus_tag="VLL76_11120"
     CDS             276..1520
                     /locus_tag="VLL76_11120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HSV30105.1"
                     /translation="MTAGSLKRRARSLLAFLRYVAGRFQTDRASSMAASLSYTSLLAL
                     VPLMAIALAMLAAFPVFDDVRNQLQSWVFQNFVPAIGEVVQKQVGRFIANAGKLTAAG
                     IVGLAFTAIMLLVTIEDALNVVFRVARERKAMSKLLVYWTVLTLGPLLIGLTFSLQTY
                     LTAASRWAVGKSGTAMLTAPLPTLLSALAFTVLFATVPNRRVQLKDAIIGGFAAALLF
                     AVLRYGFGLYVISSGAYTNVYGAVAAVPIFLFWMFLSWMAVLIGAEITAALPEWRAGY
                     HQADRKARGARRLTLALEVLSILGEAAREGGGVPRRDLLERTAVAERDLLPVLRRLIE
                     TDFVAPTSGRRYLLARDLAGATLGNLIQALELDLALDDSVATCSAWRPAVESRIAAAH
                     AAAGDALGVSLSDTLFATRNES"
     gene            1627..2013
                     /locus_tag="VLL76_11125"
     CDS             1627..2013
                     /locus_tag="VLL76_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1842 domain-containing protein"
                     /protein_id="HSV30106.1"
                     /translation="MPDMDGLYLVKLQVTKEGLMGAPTLSLNLVVYAPNGTVNGDAAI
                     TQAILNGQIHIPQVSGNIHHTGFGKDQQLVSLSGQYVQSVPPPAIGSFLAEFKAALVV
                     DASWNGRGTFSYGGHTIADATVKQID"
     gene            complement(2056..>2761)
                     /locus_tag="VLL76_11130"
     CDS             complement(2056..>2761)
                     /locus_tag="VLL76_11130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018874129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30107.1"
                     /translation="QASNLEETAASMEELAATVRQNSGNAQQANQLAAGAREIAAGGG
                     QVVGEAVTAMGRIEASSQKIEDIVGMIDEIAFQTNLLALNAAVEAARAGDAGKGFAVV
                     AQEVRNLAQRSAQASKEIKTLIGESSAQVRTGADLVKGAGKTLEEILGSVKRVADIVA
                     EIAAASAEQASGIDQVNAAVTQMDEMTQQNAALVEESAAAAHSLEEQARELNRLMGFF
                     HTGQARVSDRPVRSRV"
BASE COUNT          395 a          964 c          907 g          495 t
ORIGIN      
        1 gcgagcggac gcacccgctt ctccagcgcc tcgccctgat aggtgaaggc cagttcggcg
       61 ccgtgggcac gggcaagcgc ggcgatgccc caggcgatgg agcgatcatt ggcgacgccc
      121 atgatcagac ccttcttgcc ggccatcagg ggggtgggag cggtcatgcg ttcctctcgt
      181 ctggatgata caatgggcct acgaaaggcg gccggcatcc tacacgaaac aagggatacg
      241 gcaaaggttg gttaggatga tcggggggat tggcgatgac ggcgggatca ttgaagcggc
      301 gggcgcggtc gttgctggcc tttttgcgct atgtcgccgg ccgcttccag acggaccggg
      361 ccagcagcat ggcggcgtcg ctgtcctaca cctcgctgct ggcgctggtg ccgctgatgg
      421 ccatcgcgct ggccatgctg gcggccttcc cggtgttcga cgacgtccgc aaccagttgc
      481 agtcctgggt cttccagaat ttcgtgccgg ccatcggcga ggtggtgcag aagcaagtgg
      541 ggcgcttcat cgccaatgcc ggcaagctga ccgccgccgg catcgtcggc ctggccttca
      601 ccgccatcat gctgctggtg accatcgagg acgcgctcaa cgtggtgttc cgcgtcgccc
      661 gcgagcgcaa ggcgatgtcc aagctgctgg tctattggac ggtgctgacc ctggggccgc
      721 tgctgatcgg cctgaccttc tcgctgcaga cctacctgac cgccgccagc cgctgggcgg
      781 tgggcaaatc gggcaccgcc atgctgacgg cgcccttgcc caccctgctg tcggcgctgg
      841 ccttcaccgt gctgttcgcc accgtgccca accgccgcgt ccagttgaag gacgcaatca
      901 tcggcggctt cgcggcggcg ttgctgttcg cggtgctgcg ctatggcttc gggctctacg
      961 tcatcagctc gggggcctac accaacgtct acggtgcggt cgccgccgtg ccgatcttcc
     1021 tgttctggat gttcctgtcg tggatggcgg tgctgatcgg cgccgagatc accgccgccc
     1081 tgcccgagtg gcgcgccggc tatcaccagg ccgaccgcaa ggcgcgcggc gcccgccggc
     1141 tgaccctggc gctggaggtg ctgtccattc tgggcgaggc ggccagggag ggcggcggcg
     1201 tcccccgccg cgacctgctg gagcgcaccg ccgtggccga gcgcgacctg ctgccggtgc
     1261 tgcgccgcct gatcgagacc gatttcgtgg ccccgaccag cggccgccgc tacctgctgg
     1321 cccgcgacct ggccggcgcc accctcggca acctgatcca ggccctggaa ctggacctgg
     1381 cactggacga ttccgtcgcc acctgttcgg cctggcgccc ggcggtggaa agccgcatcg
     1441 cggccgccca cgccgcagcc ggggacgcgc tgggggtcag cttgtccgac acgctcttcg
     1501 ccacccgaaa tgaatcatga tgtaattttt acacgccaaa gttacgtcag gccattgatt
     1561 acacgcccgc ggacgtccta gcatcgcccc atcaccaact taggtggtca ttctgaggag
     1621 gatgcaatgc ccgatatgga cggtctctat ctcgtcaagc tgcaggtcac taaggaaggg
     1681 ttgatgggcg cgccgacgct cagcctgaac ctggtggtgt acgcccccaa cggcaccgtc
     1741 aacggcgacg ccgccatcac ccaggcgatc ctgaacggcc agatccacat tccgcaggtt
     1801 tccggcaaca tccaccacac cggcttcggc aaggaccagc aactggtctc gctgtccggc
     1861 cagtacgtcc agtcggtccc gccgcccgca atcggctcgt tcctggccga gttcaaggcc
     1921 gccctggtgg tggacgcgag ctggaacggt cgtggcacct tcagctacgg cggccacacc
     1981 atcgccgacg cgaccgtcaa gcagatcgac tgaccggcgg agggcggcgc ttggcgaaag
     2041 cgccgcccaa cgtcctcaca cccgtgatcg caccggccgg tcgctgaccc gcgcctggcc
     2101 ggtgtggaag aagcccatca gacggttcaa ctcgcgcgcc tgctcctcca gcgagtgggc
     2161 ggccgccgcc gattcctcga ccaaggccgc gttctgctgg gtcatctcgt ccatctgggt
     2221 gacggcggcg ttgacctggt cgatgccgga tgcctgctcg gcgctggcgg ccgcgatctc
     2281 ggcgacgatg tcggcgaccc gtttcacgct gcccaggatc tcttccagcg tcttgccggc
     2341 gcccttgacc aagtcggcgc cggtgcgcac ctgggccgag ctttcgccga tcagcgtctt
     2401 gatctccttc gacgcctggg ccgagcgttg cgccaggttg cgcacttcct gcgccacgac
     2461 ggcgaagccc ttgccggcgt cgccggcgcg cgcggcttcc accgccgcat tcaaggccag
     2521 caggttggtc tggaaggcga tctcgtcgat catgccgacg atgtcctcga tcttctggct
     2581 gctggcctcg atgcggccca tggcggtgac cgcctcgccg accacctggc cgccgccggc
     2641 cgcgatctcg cgggcgccgg ccgccaattg gttggcctgc tgggcattgc cggaattctg
     2701 gcgcacggtg gcggccagtt cttccatgct ggcggccgtc tcttccaggt tcgacgcctg
     2761 c
//
LOCUS       DATIKR010000700         1550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_10562, whole genome shotgun sequence.
ACCESSION   DATIKR010000700 DATIKR010000000
VERSION     DATIKR010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10562"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VLL76_11135"
     CDS             complement(<1..251)
                     /locus_tag="VLL76_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV30108.1"
                     /translation="MLHPRTGGLAALALLVSLAPLTFPNAYFYDVAVNAVFNAIVCVG
                     LNLLIGYGGQISLGHAGFFALGAYGSAILTASHGVPPLAA"
     gene            complement(253..1128)
                     /locus_tag="VLL76_11140"
     CDS             complement(253..1128)
                     /locus_tag="VLL76_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV30109.1"
                     /translation="MFAEFLQYVFSGLTSGAIYALAGLGFAIIYNSSHVINFAQGEFI
                     MIGGMSTATLVASGVPLPVAAGLAVLLTMLVGVALEKFAVEPARNADVVAIIIITIGA
                     SIFLRGAAQVVWDKEFHAIPAFSGETPIGVMGATLMPQSLWVVGVSVAVIAALWWFFN
                     KTLFGKAMLATSFNRLAAQLVGIGVKRTLMVSFALSAMLGAVGGIVMTPITFTNYEVG
                     IMLGLKGFSAAVLGGLGNGLGAIVGGLIVGIAEALASGYLSSAYKDAIAFVIILFVLF
                     FLPNGLFGKKGTDRV"
     gene            complement(1249..>1550)
                     /locus_tag="VLL76_11145"
     CDS             complement(1249..>1550)
                     /locus_tag="VLL76_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV30110.1"
                     /translation="ATDPQKPVVTAFKKEYETAFKSEVSTFAGHAYDGLQMALAAIKR
                     SGSTDKAKVRDELEKTSGYVGTGGVVSMSAADHMGLTPSAFHMVEIKKGDWVLAD"
BASE COUNT          295 a          512 c          509 g          234 t
ORIGIN      
        1 gccgccagcg gcggcacgcc gtggctggcg gtcaggatcg cgcttccata ggcgcccagg
       61 gcgaagaagc cggcatggcc caggctgatc tgaccgccat agccgatcag caggttgagg
      121 ccgacgcaga cgatggcgtt gaacaccgcg ttgacggcga cgtcgtagaa ataggcgttg
      181 gggaaggtca gcggcgccag cgaaaccagc aatgccagcg cggccaaacc tccggtgcgg
      241 ggatgcagca tcttacaccc ggtcggtgcc cttcttgccg aacaggccgt tcggcaggaa
      301 gaacagtacg aagagaatga tgacgaaggc gatggcgtcc ttgtaggccg acgacagata
      361 gcccgaggcc agcgcctcgg cgatgccgac gatcaggccg ccgacgatgg cgcccaggcc
      421 gttgcccagc ccgcccagca cggcggccga gaagcccttg aggcccagca tgatgccgac
      481 ctcgtaattg gtgaaggtga tgggcgtcat gacgatgccg cccaccgcgc ccagcatggc
      541 cgacagggcg aagctgacca tcagcgtgcg cttgacgccg atgccgacca gttgcgccgc
      601 cagccggttg aagctggtcg ccagcatggc cttgccgaac agggtcttgt tgaagaacca
      661 ccacaaggcg gcgatcaccg ccacggaaac gcccacaacc cacaggcttt gcggcatcag
      721 ggtggcgccc atgacgccga tcggggtctc gcccgagaac gccgggatcg cgtggaattc
      781 cttgtcccac accacctgcg ccgcgccgcg caggaagatc gaggcgccga tggtgatgat
      841 gatgatcgcc accacgtcgg cgttgcgcgc gggttcgacc gcgaacttct ccagcgccac
      901 gcccaccagc atggtcagca gcaccgccaa tcccgccgcc accggcagcg gcacgcccga
      961 cgccaccagc gtggccgtgc tcatgccgcc gatcatgatg aactcgccct gggcgaaatt
     1021 gatcacgtgg ctggagttgt agatgatcgc gaagccaagc cccgcgaggg cgtagatcgc
     1081 ccctgaggtc aggccggaga acacgtactg gagaaattca gcgaacaatt cggtcccacc
     1141 ctgattcgat cgtcatcccg ggcgagcatc gcgagacccg ggatccatgg tggtacaccg
     1201 ccatggaccc cggctcgcgc tgcgcttggc cggggtgacg agttcccttt agtccgccag
     1261 cacccagtcg cccttcttga tctcgaccat gtggaaggcc gagggggtca ggcccatgtg
     1321 gtcggcggcc gacatcgaga cgacgccgcc ggtgccgaca tagcccgagg tcttctcgag
     1381 ctcgtcgcgc accttggcct tgtcggtcga acccgaccgc ttgatggcgg ccagggccat
     1441 ctgcaggccg tcataggcat ggccggcgaa ggtcgagacc tcggacttga aggcggtctc
     1501 gtactccttc ttgaaggcgg tcacaacagg cttctgcggg tcggtcgcgg
//
LOCUS       DATIKR010000701         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_71502, whole genome shotgun sequence.
ACCESSION   DATIKR010000701 DATIKR010000000
VERSION     DATIKR010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71502"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VLL76_11150"
     CDS             complement(<1..906)
                     /locus_tag="VLL76_11150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30111.1"
                     /translation="MIPITHLPPDAQLRFVLFHSCLAFSDARRAVDHAERAYDWIVGG
                     AKAQPEPQPEPQPQPEPEPEPEPEPEPEPEPEPEPQPEPQPEPEPAPVSREVGVTDLV
                     ANRREELLRWWLAGRRVDPDMTGHFRATKPTVARALKVAGISDAFRRGAGGKAAYDLV
                     PLGDALPQAAIDLLARPVGDATPPAPAGDDLVAASATAEAEIAEPVVADDLRAEGIEL
                     PPPPVGSIDDLIGAALVADKPDVPAAPSKASRRPFAGCLTTKPRDDIEAKAQERELIE
                     RALDRGAAKITKIHTPGSHPGGEVSI"
     gene            complement(903..1112)
                     /locus_tag="VLL76_11155"
     CDS             complement(903..1112)
                     /locus_tag="VLL76_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30112.1"
                     /translation="MTRQETCIGCRAFESGTAAGDGDGECRRHPPKARFFERGRKIGA
                     AWPVVQASDWCLDFSAYAPSPKDVP"
     gene            complement(1109..1351)
                     /locus_tag="VLL76_11160"
     CDS             complement(1109..1351)
                     /locus_tag="VLL76_11160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30113.1"
                     /translation="MCDCIATVNALLADRNAELECTFNLLTGREYPKLGVLKKDKRNR
                     QRRPLMIPTFCPFCGERYEPETGVEELPLNKAETGP"
     gene            complement(1356..>1697)
                     /locus_tag="VLL76_11165"
     CDS             complement(1356..>1697)
                     /locus_tag="VLL76_11165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30114.1"
                     /translation="GDHQGGDVLAADLDAARLAAQPPTLESAVAHLSITGTTLHGPVD
                     PACPPDCEARLGHHSASGPVRAAVACPLTTAKGRYGWLCEGTEAAKVAACDDGLRPRK
                     GDVIYSDPVEG"
BASE COUNT          215 a          559 c          664 g          259 t
ORIGIN      
        1 aatcgacact tcgccgccgg gatggctgcc gggcgtgtgg atcttggtga tcttggcggc
       61 gccacggtcc agcgctcgtt caatcaactc gcgctcctgc gccttggcct cgatgtcgtc
      121 gcggggcttg gtggtcaggc agccggcaaa aggccggcgc gaggccttgg acggcgcggc
      181 gggaacatcg ggcttgtccg cgaccagggc ggcaccgatc agatcgtcga tggatccgac
      241 gggcggcggc gggagctcga tcccttcggc gcgcaggtcg tcggcgacga ccggctcggc
      301 gatctcggcc tcggccgtcg cggaagccgc gaccagatca tcgccggccg gcgccggcgg
      361 ggtggcgtcg ccgaccggcc gggccaggag gtcgatcgcc gcctgcggca gcgcgtcgcc
      421 cagcggcacc aggtcgtagg ccgccttgcc gccggcgcca cggcggaacg cgtcggaaat
      481 gccggcgacc ttgagggcgc gggcaacggt cggcttggtc gcgcggaagt gccccgtcat
      541 gtcgggatca acccggcgtc cggccagcca ccagcgcagc agctcctcgc gccggttggc
      601 gaccaggtcg gtgacgccaa cctcgcggga gaccggcgca ggctcgggtt ccggctgggg
      661 ttccggctgg ggttccggct cgggttccgg ctccggttcc ggctcgggtt ccggctcggg
      721 ttccggctcg ggctggggct ggggttccgg ctggggttcc ggctgcgcct tggcgccacc
      781 gacgatccag tcgtaggcgc gttcggcgtg gtcaaccgcc cggcgcgcgt ccgagaaggc
      841 caggcaggaa tggaacagca cgaagcgcag ctgggcgtcg ggcggcaggt gggtgatcgg
      901 gatcatggca cgtccttggg cgacggggcg taggcggaaa aatcgaggca ccagtcggag
      961 gcctggacca ccggccaagc cgcgccgatc ttgcggccgc gctcgaagaa gcgggccttg
     1021 ggcggatggc ggcggcactc gccgtcgcca tcgccggcgg cggtgccgga ttcaaaagcg
     1081 cggcagccga tgcaggtttc ctggcgggtc atggtccggt ctccgccttg ttgagtggaa
     1141 gttcctccac gcctgtttcc ggctcgtacc gctcgccgca gaacgggcag aaggtcggga
     1201 tcatcaacgg ccggcgctgg cggttgcgct tgtccttctt gaggacgccc agcttcgggt
     1261 actcccggcc ggtcagcaga ttgaaggtgc attccaactc ggcgttgcgg tcggccagca
     1321 gggcgttgac ggtggcgatg cagtcgcaca tggcctcagc cctccaccgg gtcggaatag
     1381 atgacgtcgc ccttgcgggg acgcaggccg tcgtcgcagg cggcgacttt ggccgcctcg
     1441 gtcccttcgc acagccagcc atagcggccc ttggcggtgg tcagcgggca ggcgaccgcc
     1501 gcgcggacgg gtccgctggc gctatggtgg ccgaggcggg cctcgcagtc cggcgggcac
     1561 gcggggtcca ccggcccatg cagggtggtg ccggtgatgg acaggtgggc cacggcagat
     1621 tccagcgtcg gcggctgggc ggccaggcgg gcggcatcga ggtcggcggc cagcacgtcg
     1681 ccgccctggt ggtcgcc
//
LOCUS       DATIKR010000702         3650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_216606, whole genome shotgun sequence.
ACCESSION   DATIKR010000702 DATIKR010000000
VERSION     DATIKR010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216606"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /gene="hybA"
                     /locus_tag="VLL76_11170"
     CDS             <1..703
                     /gene="hybA"
                     /locus_tag="VLL76_11170"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HSV30115.1"
                     /translation="LSGSTRTLIKLFKESDRRWSYVKYSCMHCQKPSCVSVCPVSAMT
                     RDKITGTVDYNKDACIGCRYCVAACPFGVPQFQYDTATPEIAKCQLCKHRLAEGKIPA
                     CAHVCPTGATLFGPYKALDEEIARRKAMVPGEANDFPRRTVDSGDTHEKAAAQYVDHV
                     YGDKDVGGTQVRYLSGVSFDKFGLPVGLPERSFSSKSETLQHTLYSGLIAPAVVLGGL
                     VAAAYRGSKNHHDDE"
     gene            713..1891
                     /gene="hybB"
                     /locus_tag="VLL76_11175"
     CDS             713..1891
                     /gene="hybB"
                     /locus_tag="VLL76_11175"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009206449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HSV30116.1"
                     /translation="MSHMNHHHHKPVAIGGKLITPMTVVLGVLVAVAFFFLGQRFIYG
                     LGSVTNINNGYPWGIWVVWDVVIATGFACGGYAMAIVAYILNKGEYHPLVRPALTASL
                     FGYSLGGASVLVDLGRWWNFWHILWPGYANPNSVMFEVAACISLYVIVLWIEFSPAFL
                     EHLGLKDIKRKLSKVMFFFIGLGVLLPSMHQSSLGSLLVVMGSQIHPLWQTMLLPLLF
                     LLTAACMGFAVVILEATLAAVGFGRDLDHELPMLSKIGKIIAGVLIVYLALRLGDIVV
                     RGELLTIFTSGVKSVMFLIEIALFVYPVVLMSKPANRKHLSKLFAAAGSMLTGAVLYR
                     IDAFLVAYDTGAGWHYFPSVPEMMVTIGIIALEVLAYIVFVKKFPILPGQPHQPSQGR
                     "
     gene            1908..3614
                     /locus_tag="VLL76_11180"
     CDS             1908..3614
                     /locus_tag="VLL76_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HSV30117.1"
                     /translation="MSKRITIDPITRIEGHLRIDVEVDNGKVKKAWSSGQMWRGVELI
                     LLGRDPRDAWAITQRICGVCTTVHAITSVRAVENALNLEVPVNAQFIRNMIASAHALH
                     DHIVHFYHLSALDWVDVVSALKADPDKTSALAESLSDWPMNSKHVMRQTQEKLKTFVG
                     SGQLGPFANGYWGHPAMKLSPEVNLLAVAHYLQALEAQRHANKIVTILGSKSPHIQNL
                     AVGGVANPIDTNSQSNLTIERLLAVKEHIDALGDFVRKVYIPDVAAIGAFYADWTKYG
                     AGITNYISTPDFPTDSKGTSFLVPGGHVPDGDLKQYKPFTQFGDAYLRDGVEESVKHA
                     WYTYSKPGPLHPYKGETTPHYTDFQDDGKYSWLKAPTFYGKRAQVGPLANVLCGLAAG
                     HQPTIGYATTMLNTVSSLLGSKVGPEILHSTIGRHAARAIRGGVMTEVLTQNWQMLIE
                     NISKGDTTTFNKPVFPKGEVMGFGMHEAPRGLLSHWTVIKDGKIANYQCVVPSTWNAG
                     PRDENDVIGPYEASLMDNPIADAEQPLEVLRTVHSFDPCLACAVHVVDEEAGTAVQVK
                     AL"
BASE COUNT          635 a         1304 c         1086 g          625 t
ORIGIN      
        1 cctctccggc agtacccgta ccctgatcaa gctgttcaag gagtcggacc ggcgctggtc
       61 ctacgtgaag tattcctgca tgcactgcca gaagccgtcc tgcgtctcgg tctgtccggt
      121 cagcgccatg acccgcgaca agatcaccgg cacggtcgat tacaacaagg acgcctgcat
      181 cggctgccgc tactgcgtcg ccgcctgccc gttcggcgtg ccgcaattcc agtacgacac
      241 ggcaacgccc gagatcgcca agtgccagtt gtgcaagcat cgcctggccg agggcaagat
      301 cccggcctgc gcccatgtct gccccaccgg cgccaccctg ttcggcccct acaaggcgct
      361 ggacgaggag atcgcgcggc gcaaggcgat ggtgccgggc gaggccaacg acttcccccg
      421 ccgcaccgtc gattccggcg acacccatga aaaggcggcc gcccaatacg tcgaccacgt
      481 ctacggcgac aaggacgtgg gcggcaccca ggtgcgttat ctgtcgggcg tgtcgttcga
      541 caagttcggc ctgcccgtcg gcctgccgga acgctcgttc tcgtcgaagt ccgaaaccct
      601 tcagcacacg ctctacagcg gcctgatcgc tccggcggtg gtgctgggtg gcctggtcgc
      661 cgcggcttat cgcggctcca agaaccacca cgacgacgag taggaggccg ccatgagcca
      721 catgaatcat caccaccaca agccggtggc catcggcggc aagctcatca cccccatgac
      781 ggtggtgctg ggcgtcctgg tcgccgtcgc cttcttcttc ctgggccagc gcttcatcta
      841 cggcctgggc tccgtcacca acatcaacaa cggctacccc tggggcatct gggtggtgtg
      901 ggacgtggtc atcgccaccg gcttcgcctg cggcggctat gccatggcca tcgtcgccta
      961 catcctcaac aagggcgaat accacccgct ggtgcgcccg gccctgaccg cctcgctgtt
     1021 cggctatagc ctgggcggcg cctcggtgct ggtcgatctg ggccgctggt ggaatttctg
     1081 gcacatcctg tggccgggct acgccaaccc caactcggtg atgttcgagg tcgcggcctg
     1141 catctcgctc tacgtcatcg tgctgtggat cgagttcagc cccgccttcc tggagcatct
     1201 cggcctcaag gacatcaagc gcaagctcag caaggtgatg ttcttcttca tcggcctggg
     1261 cgtgctgctg ccgtccatgc accaaagctc gctgggttcg ctgctggtgg tgatgggcag
     1321 ccagatccat ccgctgtggc agaccatgct gctgccgctg ctgttcctgc tgaccgccgc
     1381 ctgcatgggc ttcgccgtgg tgatcctgga ggcgactttg gccgccgtcg gcttcggccg
     1441 cgacctcgac cacgagctgc ccatgctgtc gaagatcggc aagatcatcg ccggcgtgct
     1501 gatcgtctac ctggccctgc gcctgggcga catcgtcgtg cgcggcgaac tgctgaccat
     1561 cttcacctcg ggtgtgaaga gcgtgatgtt cctgatcgag atcgcgctgt tcgtctatcc
     1621 ggtggtgctg atgagcaagc ccgccaaccg caagcacctg tccaagctgt tcgccgccgc
     1681 cggctccatg ctgacgggcg cggtgctgta ccgcatcgac gccttcctgg tggcctacga
     1741 caccggcgcc ggctggcact acttccccag cgtccccgag atgatggtga ccatcggcat
     1801 catcgcgctg gaagtgctgg cctacatcgt cttcgtcaag aaattcccca tccttcccgg
     1861 ccaaccgcac cagccctcgc aaggccgttg attaggagat tgcagtcgtg agcaagcgta
     1921 tcaccatcga tcccatcacc cgcatcgagg gccatctgcg catcgacgtc gaggtggaca
     1981 acggcaaggt caagaaggcc tggtcgtccg gccagatgtg gcgcggcgtc gaactcatcc
     2041 tgctcggccg cgacccgcgc gacgcctggg ccatcaccca gcgcatctgc ggcgtctgca
     2101 ccaccgtgca cgccatcacc tcggtccgcg ccgtcgagaa cgcgctgaac ctggaagtgc
     2161 cggtcaacgc tcagttcatc cgcaacatga tcgcgtcggc ccatgccctg cacgatcaca
     2221 tcgtccactt ctaccacctg tcggcgctcg actgggtgga cgtggtctcg gcgctcaagg
     2281 ccgaccccga caagacctcg gccctggccg agtcgctgtc ggactggccg atgaactcga
     2341 agcacgtcat gcgccagacc caggagaagc tgaagacctt cgtgggctcc ggccagctgg
     2401 gtccgttcgc caacggctat tggggccacc cggccatgaa gctgagcccc gaggtcaacc
     2461 tgctggcggt cgcccactac ctgcaggccc tggaggccca gcgccacgcc aacaagatcg
     2521 tcaccatcct ggggtcgaag tcgccgcaca tccagaacct ggcggtcggc ggcgtcgcca
     2581 atccgatcga caccaacagc cagtcgaacc tgaccatcga gcgcctgctg gcggtcaagg
     2641 agcacatcga cgccctgggc gacttcgtgc gcaaggtcta catccccgac gtcgccgcca
     2701 tcggtgcgtt ctacgccgac tggaccaagt acggcgccgg catcaccaac tacatctcga
     2761 cccccgactt ccccaccgac agcaagggca ccagcttcct ggtccccggc ggccacgtgc
     2821 ccgacggcga cctgaagcag tacaagccct tcacccagtt cggcgacgcc tatctgcgcg
     2881 acggcgtcga ggaatcggtc aagcacgcct ggtacaccta ttccaagccc ggcccgctgc
     2941 atccctacaa gggcgagacc acgccgcact acaccgactt ccaggacgac ggcaagtata
     3001 gctggctcaa ggccccgacc ttctatggca agcgcgccca ggtcggcccg ctggccaacg
     3061 tgctgtgcgg cctggcggcc ggccaccagc cgaccatcgg ctacgccacc accatgctga
     3121 acaccgtgtc cagcctgctg ggcagcaagg tcggccccga gatcctgcat tcgaccatcg
     3181 gccgccacgc ggcgcgcgcc atccgtggcg gcgtgatgac cgaggtgctg acccagaact
     3241 ggcagatgct gatcgaaaac atctcgaagg gcgacaccac caccttcaac aagccggtct
     3301 tccccaaggg cgaggtcatg ggcttcggca tgcacgaggc gccgcgcggc ctgttgtcgc
     3361 actggacggt catcaaggac ggcaagatcg ccaactacca atgcgtcgtg ccgtcgacct
     3421 ggaacgccgg cccgcgcgac gagaacgacg tcatcggccc ctacgaggcc tcgctgatgg
     3481 acaaccccat cgccgacgcc gaacagccgc tggaagtgct ccgcaccgtc cactccttcg
     3541 acccctgcct ggcctgcgcc gtgcacgtgg tcgacgagga agccggcacc gccgtgcagg
     3601 tgaaggcgct gtgattatgt taccctctcc cgcttgcggg agagggaggg
//
LOCUS       DATIKR010000703         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191655, whole genome shotgun sequence.
ACCESSION   DATIKR010000703 DATIKR010000000
VERSION     DATIKR010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191655"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..357
                     /locus_tag="VLL76_11185"
     CDS             154..357
                     /locus_tag="VLL76_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014259418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2795 domain-containing protein"
                     /protein_id="HSV30118.1"
                     /translation="MPLASHSTATIAQVLSGIDFPANKQKLVDYAQKNNADSEVLDAI
                     KQMPDAEYTSMADVFKGVGQSNQ"
     gene            complement(422..1303)
                     /gene="bioB"
                     /locus_tag="VLL76_11190"
     CDS             complement(422..1303)
                     /gene="bioB"
                     /locus_tag="VLL76_11190"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HSV30119.1"
                     /translation="MDLLFEAQTIHRANFDPNKIQISRLLSIKTGGCPEDCSYCPQSA
                     HYATGLEKEKLLAVEEVIEAAQKAKDEGASRFCMGAAWRGPKGDDFQVALAMIEGVKA
                     LGMQTCASFGLLSREQAKQLKEAGLDYYNHNLDTSPEHYGEVIHTRKFQDRLDTLEHV
                     QDAGLHVCSGGIVGMGEGQTDRAKMLIALANLPKHPDSVPINLLIPIPGTPLAEAERP
                     DPFDFVRTIAVARIMMPKSFVRLSAGREGMTEEMQALCFFAGANSVFCGEKLLTARNA
                     KPGQDKSMFQRLGLSPM"
     gene            1526..>2420
                     /locus_tag="VLL76_11195"
     CDS             1526..>2420
                     /locus_tag="VLL76_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV30120.1"
                     /translation="MHDLDTRLDSFLADLEGQGRRRRLRAVEPLPAGRVRVGGREVLN
                     FSSNDYLGLNRHPEMIERAREWAAKYGAGSGASRLVTGHLAALEAIEAKIAAAKGTQS
                     ALVFASGWQCNASVLPALLDRSLWGVEPLLFTDRLNHASLHMGAQAAGTHQIRFRHND
                     LDHLEELLDKHQGAPRLIVTESVFSMDGDMPDMARLEALAQKYDALLYVDEAHATGVL
                     GRNGFGLTVGHHVDVAMGTFSKALGCFGAYVAGSKALTDYLVNRASGVIYATALPPAV
                     LGAMDAALDLVPRLEAERVRLQ"
BASE COUNT          396 a          810 c          806 g          408 t
ORIGIN      
        1 gaggccggcg gcggcgccga ccgccagggc taccgcctgg ccggcatcgg tcgccgcaag
       61 ggggagggct gacgaaaatc cggggaagcg gaacgaacct tcaacggccg ggcgcgttgg
      121 ctcgacagca accgtccaaa ggaggaggaa cgaatgcctc tcgccagcca ctccaccgcc
      181 accatcgccc aggtgctgtc cggcatcgac ttcccagcca acaagcagaa actggtcgat
      241 tacgcccaga agaacaacgc cgattcggaa gtcctggacg ccatcaagca gatgcccgac
      301 gccgaataca ccagcatggc cgacgtcttc aagggcgtgg gccagagcaa tcagtaagct
      361 cgtccaccgt catcctgacg cacggtggtg atccgagaat caacaccgtg cgtcagtgcg
      421 tttacatcgg gctcaggccc aggcgctgga acatgctctt atcctgaccc ggcttggcgt
      481 tcctggcggt cagcagcttt tcgccgcaga acaccgaatt ggcgccggcg aagaagcaca
      541 gcgcctgcat ttcctcggtc atgccctcgc ggccggccga cagccgcacg aagctcttgg
      601 gcatcatgat gcgggcgacc gcgatggtgc gcacgaagtc aaacggatcg gggcgctcgg
      661 cctcggccag gggcgtgccg ggaatgggga tcagcaggtt gatcggcacg ctgtcggggt
      721 gcttgggcag gttggccagc gcgatcagca tcttggcgcg gtcggtctgg ccctcgccca
      781 tgccgacgat gccgcccgaa cagacgtgca ggccggcgtc ctggacgtgc tccagggtgt
      841 cgaggcggtc ctggaatttg cgggtgtgga tcacctcccc gtaatgctcg gggctggtgt
      901 cgaggttgtg gttgtaatag tcgaggccgg cttccttgag ctgcttggcc tgttcgcggc
      961 tgagcaggcc gaagctggcg caggtctgca tgcccaaggc cttgacaccc tcgatcatgg
     1021 ccaaggccac ctggaagtcg tcgcccttgg ggccgcgcca ggcggcgccc atgcagaagc
     1081 gcgaggcgcc ctcgtccttg gccttctggg cggcctcgat cacttcctcg accgccagca
     1141 gcttttcctt ttccagcccg gtggcgtaat gggccgattg cgggcagtac gagcaatcct
     1201 cggggcagcc gccggtcttg atcgacagca ggcggctgat ctggatcttg ttggggtcga
     1261 aattggcacg gtggatggtc tgggcctcga acagcaggtc catgaagggc ttggcgtaca
     1321 gcgcctcgac ctcctccacg ctccagtcgt ggcgcagtcc gtcgtccttg atcttgctca
     1381 ccgcagccgt caccgctgac ctccaataag tccttgttcg gagaagggtc tttcgacctt
     1441 cgccccaccc ttgcggggag cgcagattag gccggcgaac gccgcctttg caacagcagc
     1501 gaaaagcttc tagaaggtgg ctcccatgca cgacctcgat acccgactgg attcgttcct
     1561 tgccgacctg gagggccagg gccgccgccg ccgcttgcgc gcggtcgagc cgctgccggc
     1621 cggccgcgtg cgggtgggcg ggcgcgaggt gctgaacttt tcgtccaacg actatctcgg
     1681 cctcaaccgc caccccgaga tgatcgagcg cgcccgcgag tgggccgcca agtatggcgc
     1741 cggctcgggc gcgtcgcggc tggtgaccgg ccatctggcg gcgctggagg ccatcgaggc
     1801 caagatcgcc gccgccaagg gcacccagtc ggcactggtg ttcgccagcg gctggcaatg
     1861 caacgcgtcg gtgctgcccg ccctgctgga caggtcgctg tggggcgtcg agccgctgct
     1921 gttcaccgac cgcttgaacc acgccagcct gcacatgggc gcccaggcgg ccggcaccca
     1981 ccagatccgc ttccgccaca acgacctcga ccaccttgag gagttgctgg acaagcacca
     2041 gggcgccccc cggctgattg tcaccgaatc ggtgttcagc atggacggcg acatgccaga
     2101 catggcccgg ctggaagcgc tcgcccagaa gtacgacgcc ttgctgtacg tggacgaggc
     2161 gcacgccacc ggcgtgctgg gccgcaacgg cttcggcctg acggtgggcc accacgtcga
     2221 tgtcgccatg ggcaccttct cgaaggcgtt gggctgcttc ggcgcctatg tggcggggtc
     2281 caaggcgctg accgactatc tggtcaaccg cgcctccggc gtcatctacg ccaccgctct
     2341 gccgcccgcc gtgctgggcg ccatggacgc cgccctcgat ctggtgccgc gcctggaggc
     2401 cgagcgggtg cggctgcagg
//
LOCUS       DATIKR010000704         3530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_131398, whole genome shotgun sequence.
ACCESSION   DATIKR010000704 DATIKR010000000
VERSION     DATIKR010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3530
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131398"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VLL76_11200"
     CDS             <1..479
                     /locus_tag="VLL76_11200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30121.1"
                     /translation="FIKTTPPDHESIARMLKWRCGITHPSIILRKVMLERVGGYRDCF
                     GDLADYDLYVRLLLAGARFAAVQEPLVLFRVSHEQRIRRGGWRYAWRELAFRRFCAQA
                     GFLSPILFATTTPVTMGFRLAPPRLKKFLYGFVRTKPAGDVTSDLVPTPSRSARHD"
     gene            472..1416
                     /locus_tag="VLL76_11205"
     CDS             472..1416
                     /locus_tag="VLL76_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HSV30122.1"
                     /translation="MTDECRALVTGGAGFIGSHLCERLLADGTDVVCVDNYFTGRRGN
                     VAHLLKLPGFEAIRHDVTFPLYAEVDRIFNLACPASPVHYQHDPVQTTKTSVHGAINM
                     LGLAKRTRSRILQASTSEVYGDPAIHPQTESYWGNVNPIGPRACYDEGKRCAETLFFD
                     YHRQHGVQIRVARIFNTYGPRMHPNDGRVVSNFIVQALKGDPITIYGDGTQTRSFCYV
                     SDMVDALLRLMNAPEPFTGPVNLGNPVESTMVELAELVIRHTNTRSRIEFRPLPADDP
                     RQRRPDIAVAQEVLEWQPKVPLEDGLRATIEYFRRTLA"
     gene            1427..2524
                     /gene="galE"
                     /locus_tag="VLL76_11210"
     CDS             1427..2524
                     /gene="galE"
                     /locus_tag="VLL76_11210"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HSV30123.1"
                     /translation="MVNVLVTGGAGYVGSHTCKALAAAGFKPVVVDDLSTGHARAVRW
                     GPLERLDLADGDGLRRIIGRHGIQAVLHFAASAYVGESMARPGKYFRNNVANSLSLVE
                     AMVECGVRRVVFSSSCATYGLPVTLPIAEDHPQAPINPYGETKRVCERMLHWFGLDHV
                     CLRYFNAAGADPDGEIGENHEPETHLLPLAIRAALGGPPLRVMGTDYPTPDGTAVRDY
                     IHVADLADAHVRALVHLLDGGEPACLNLGTGQGHSVREVVAAVERRLGRTVPVEQAPR
                     RPGDPPVLVADARRAADLLGWRARRGLDEMVEDAAGWALNPRRLAQHAGDLVLERRRQ
                     HRLGQEGADVQVLGAADGGGVGVGGQHDHRG"
     gene            complement(2462..2887)
                     /locus_tag="VLL76_11215"
                     /pseudo
     CDS             complement(2462..2887)
                     /locus_tag="VLL76_11215"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(3114..>3530)
                     /locus_tag="VLL76_11220"
     CDS             complement(3114..>3530)
                     /locus_tag="VLL76_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSV30124.1"
                     /translation="DILVAFEMAEGARWADQLRPGGVAMVNTIKLVPPIVSTGLFSYP
                     ADPVATMRAAGVTVYDFDAGAIARELGDLRLVNTIMLGAIADYLPFPAADLEEQVVAR
                     FRERKPALVEVNKRAFAAGRAAAQASAGSRPLAANQ"
BASE COUNT          548 a         1183 c         1191 g          608 t
ORIGIN      
        1 atttcatcaa gacgacgcct ccggaccacg agtcgatcgc gcggatgctg aaatggcgct
       61 gcggcatcac ccatccctcg atcatcctgc gcaaggtcat gctcgagcgg gtgggcggct
      121 accgcgactg cttcggcgac cttgccgatt acgaccttta tgtccgcctg ctgctggccg
      181 gcgcgcgctt cgccgccgtc caggagccgc tggtgctgtt ccgcgtcagc cacgaacagc
      241 gcatccgccg gggcggctgg cgctatgcct ggcgggagct ggccttccgc cgcttctgtg
      301 cccaggccgg cttcctgtcg cccatcctgt tcgccaccac caccccggtc accatggggt
      361 tccggttggc cccgccgcgg ttgaagaagt tcctgtacgg cttcgtgcgc acgaagccgg
      421 ctggtgacgt gacgtcggac cttgttccca ccccttcacg gagtgcacga catgactgac
      481 gagtgcaggg ccttggtgac cggcggcgcc ggcttcatcg gttcccacct gtgcgagcgg
      541 ctgctggccg acggcaccga cgtggtctgc gtggacaatt acttcaccgg gcggcgcggc
      601 aacgtcgccc atctgctcaa gcttcccggc ttcgaggcga tccggcacga cgtgaccttc
      661 ccgctttatg ccgaggtcga ccgcatcttc aacctggcct gcccggcgtc gcccgtgcat
      721 taccagcacg acccggtgca gaccaccaag accagcgtgc acggcgccat caacatgctg
      781 ggcctggcca agcgcacccg ttcccgcatc cttcaggcct ccaccagcga ggtctatggc
      841 gatcccgcca tccatccgca gaccgagtcc tattggggca acgtcaatcc catcggcccc
      901 cgggcctgct atgacgaagg caagcgctgc gccgaaacgc tgttcttcga ctaccatcgc
      961 caacatgggg tgcagattcg cgtcgcaagg attttcaata cctatggccc gcgcatgcat
     1021 cccaatgacg gccgggtggt gtccaatttc atcgtccagg cgcttaaggg tgaccccatc
     1081 accatttatg gcgacggcac gcagacccgt tcgttctgct acgtctcgga catggtggat
     1141 gcgctgctcc gcctgatgaa cgcgcccgaa ccgttcaccg gcccggtcaa cctgggcaac
     1201 ccggtggaat ccaccatggt cgaactggcc gagctggtga tccgccacac caatacccgc
     1261 tcgcgcatcg agttccggcc gctgccggcc gacgacccgc gccagcgccg gcccgacatc
     1321 gcggtggcgc aagaggtgtt ggaatggcag cccaaggtgc cgctggagga cggcctgcgg
     1381 gcgaccatcg agtatttccg ccgcactctg gcgtaagggg gcgggcatgg tgaacgtgct
     1441 cgtcaccggc ggtgccggct atgtcggcag ccacacctgc aaggccctgg cggcggccgg
     1501 cttcaagccg gtcgtcgtcg acgacctgtc caccggccat gcccgcgccg tgcgctgggg
     1561 gccactggaa cgcctggacc tggccgatgg cgacggcctg cgccggatca tcggccgcca
     1621 tggcatccag gcggtgctgc atttcgccgc cagcgcctat gtcggcgaat ccatggcccg
     1681 gccgggcaag tatttccgca acaacgtcgc caactcgctg agtctggtcg aggccatggt
     1741 ggaatgcggc gtgcgccgtg tggtgttctc gtcgagttgc gccacctatg gcctgcccgt
     1801 caccctgccc atcgccgagg accatccgca ggcgcccatc aacccctatg gcgagaccaa
     1861 gcgtgtctgc gagcgcatgc tgcattggtt cggcctggat cacgtctgcc tgcgctattt
     1921 caacgccgcc ggcgccgacc ccgacggcga gatcggcgag aaccacgagc ccgagaccca
     1981 cctgctgccg ctggcgatcc gggcggcact gggcgggccg ccgctccggg tgatggggac
     2041 cgactatccc acgcccgacg gcacggcggt gcgcgactac atccacgtcg ccgacctggc
     2101 cgacgcccat gtgcgggcgc tggtccatct gctggacggc ggggaaccgg cctgcctcaa
     2161 cctggggacc gggcaggggc actcggtgcg cgaggtggtg gcggcggtgg agcggcgatt
     2221 gggccggacg gtgccggtgg agcaggctcc gcgacgcccc ggcgacccgc cggtgctggt
     2281 ggccgacgcg cgtcgggcgg cggatttgct gggatggcgt gcccggcggg ggctggatga
     2341 aatggtcgag gatgcggcgg gctgggcgtt aaacccgcgc cgcctcgccc agcacgcggg
     2401 tgatcttgtc cttgagcgcc ggcggcagca ccggcttggc caggaaggcg ccgatgtcca
     2461 ggtccttggc gcggctgacg gtggcggcgt cggtgtgggc ggtcagcatg atcaccgggg
     2521 ttgacgacac gccgggggtg gctcgcagca tcttgacgaa gccgaaaccg tccatcggcc
     2581 gcatctggat gtcgcagatg accagatctg ggcgctcgcg gaccatcgcc tcgatgccgg
     2641 aattgccgtc attggcctcg gcgatggtgc cgatgcccaa ttggaccagc atcttcttga
     2701 cgatggtgcg gacgaattcc tggtcgtcga tgacaagaac cttcagcgat gcgaaatcga
     2761 tggcaccagt catcgcgtcc cctccttgtg cggtacccgg ggacactacc agaaggaggt
     2821 ggagtggaaa agggggagcg accgcatggg agtccctcgc ccgcttgcgg gagagggagg
     2881 ggcccatgcg gcacgcatgg gagggtgagg gcgcgcaccg gcaggtgcgc ttcgcggccg
     2941 atttcaagga cacagatgaa cacagatgaa cacagatggg tttgactgct ttgtagcact
     3001 gccctgcgag gggcgtcacg agtcaaagca tttttattat ccgtgttaat ctgtgttcat
     3061 ctgtgtctca ctcattcccg tcttctttcc aagtgcctgc cgcttaggct ttactactgg
     3121 ttcgccgcca gcgggcggct gccggcgctg gcctgggcgg cggcgcggcc ggcggcgaag
     3181 gcgcgcttgt tgacctcaac cagggccggc ttgcgctcgc ggaagcgggc gacgacctgc
     3241 tcttccaggt cggcggccgg gaagggcaga tagtcggcga tggcgcccag catgatggtg
     3301 ttgaccagcc gcaggtcgcc caactcgcgg gcgatggcgc cggcgtcgaa gtcgtacacg
     3361 gtcacgccgg cggcccgcat ggtcgccacc gggtcggcgg ggtagctgaa caggccggtg
     3421 gacacgatcg gcggcaccag cttgatggtg ttgaccatgg cgacgccgcc ggggcgcaac
     3481 tggtcggccc agcgggcgcc ctcggccatc tcgaacgcca ccaggatgtc
//
LOCUS       DATIKR010000705         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_71569, whole genome shotgun sequence.
ACCESSION   DATIKR010000705 DATIKR010000000
VERSION     DATIKR010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71569"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VLL76_11225"
     CDS             complement(<1..665)
                     /locus_tag="VLL76_11225"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSV30125.1"
                     /translation="MSTRIRLLTSVAFAALVLAAAMPAQADKVGVTAAVNPQASGKPP
                     QQAERVLQVGIDMQADERVVTNANGRAQLLFLDGSGLTVGPNSDLKIDKFVYDPTSKT
                     GDLAVTAAKGVFRFVGGKISKTSEVQINTPAGTIGIRGGIATVAVSPTGATTANFLFG
                     QKMTMRAAGMEQVVTRPGTAVDGSPGQPPSAPRPSTSAELQQVNSSLQTSGEGGNGQQ
                     TQNG"
     gene            complement(678..1988)
                     /locus_tag="VLL76_11230"
     CDS             complement(678..1988)
                     /locus_tag="VLL76_11230"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV30126.1"
                     /translation="MKWRIRLFAVAAILSTSAALAATPEAEQRYEAAFQAMMADVGNL
                     DKTFEYAVAAAEVEDFEGAIAALERMLLLRPDLPRVQLELAALYFRLGSYQQARNYLM
                     MVKERKDVPSDVMARVDDYLGEIDKRVSVHKFSGTIMMGVRYDTNPNSASPVQESIFG
                     TGVETQGLSSRKDYNAYTVAMLNHVYDFQDQAGTVWESDAVYYGARYDNEKQLNLNYL
                     NLGSGPRFGLLPDVLDSASIRPYALYTHITMGGDPYGWSPGTGLNVRTKAGDATSLDL
                     TAEVRRRHFHVSAARPTAADQQGWERVAKLQAQHALTDSWTLLAGTNWTSITAMEGYH
                     DSREVGVTGGAAYSYSPFDVKSPWTTSASLTRAYIQYEIPDPLVNAGSTRLDRDWRFN
                     LSTVAPVSDDWAVMLSFGRTIRSSNILNYHYDNTSGSVAAMWRF"
BASE COUNT          388 a          681 c          709 g          408 t
ORIGIN      
        1 ccattctggg tctgctggcc gttgccaccc tcgcccgagg tctgcagcga cgaattgacc
       61 tgctgcagtt cggccgaggt cgatgggcgc ggcgccgagg gcggttggcc gggcgagccg
      121 tcgacggcgg tgcccgggcg ggtcaccacc tgctccatgc cggctgcgcg catggtcatc
      181 ttctgaccga acaggaaatt cgccgtcgtc gcgccggtcg gcgacaccgc gacggtcgcg
      241 atgccgccac ggatgccgat ggtgccggcc ggcgtgttga tctgaacttc cgacgtcttg
      301 gaaatcttgc cgcccacgaa ccggaacacg cccttggcgg ccgtcaccgc cagatcgccg
      361 gtcttcgacg tcgggtcata gacgaacttg tcgatcttga ggtccgagtt gggtcctacc
      421 gtcaggcccg agccgtcgag gaacagcaat tgcgcccggc cattggcgtt ggtcaccacc
      481 cgctcgtcgg cttgcatgtc gatgccaacc tgcagcacgc gctcggcctg ctgcggcggc
      541 ttgccgctgg cctggggatt gacggcggcg gtgacgccga ccttgtcggc ctgtgccggc
      601 atagcggcgg caagaaccag cgcggcgaag gcgaccgagg ttagaaggcg gatgcgggtg
      661 ctcatgaaac cgtcctccta gaagcgccac atggcggcga cgctgcccga ggtattgtcg
      721 taatgatagt tcaaaatgtt ggaagaacgt atcgtacgtc cgaatgacag cattaccgcc
      781 cagtcatcac tcacgggcgc gaccgtgctc agattgaaac gccaatcgcg atccaggcgg
      841 gtggagccgg cgttgaccag cggatcggga atttcatact ggatgtaggc acgggtcagg
      901 ctggccgagg tcgtccacgg cgacttcacg tcaaacggcg aatagctgta ggcggcgccg
      961 cccgtcaccc ccacctcgcg gctgtcgtga tagccctcca tggcggtgat gctggtccag
     1021 ttggtgccgg ccaatagcgt ccaggaatcg gtcagcgcat gctgcgcctg caacttcgcc
     1081 acccgttccc agccttgctg gtcggcggcg gttggccggg cggcgctgac atggaagtga
     1141 cgacggcgca cttctgcggt gaggtccagc gacgtggcgt cgccggcctt ggtccgcacg
     1201 ttgagacccg taccgggcga ccaaccatag ggatcgccgc ccatggtgat gtgggtataa
     1261 agcgcatagg gccggatcga cgcgctgtcg agaacatccg gcagcaatcc gaagcgggga
     1321 ccggaaccca aattcaggta attgaggttg agctgttttt cgttgtcgta gcgggcaccg
     1381 taatagacgg cgtcactttc ccacaccgta cccgcctgat cctggaagtc gtacacgtgg
     1441 ttcagcatcg ccaccgtgta ggcgttgtag tccttgcggc tggacaaccc ctgggtttcg
     1501 acgcccgttc cgaagatgct ttcctggacc ggcgaggcgc tgttcggatt ggtgtcgtag
     1561 cgcacgccca tcatgatggt gcccgagaac ttgtggaccg agacgcgctt gtcgatttcc
     1621 ccgaggtaat cgtcgacgcg ggccatcacg tcggacggca cgtccttgcg ttccttgacc
     1681 atcatcagat agttgcgcgc ctgctggtac gagcccaggc ggaaatacag cgcggccaac
     1741 tccaactgga cgcgcggcag gtcgggccgc agaagcagca tgcgctcgag cgccgcgatg
     1801 gcgccttcga agtcctcgac ctcggctgcg gcgaccgcgt actcgaacgt cttatccaga
     1861 ttgccgacat cggccatcat ggcctggaac gctgcctcgt accgctgctc ggcctcgggc
     1921 gtcgcggcca gggcggcgct tgtcgaaagg atcgcggcga cggcgaaaag tctgatccgc
     1981 cacttcatca cgaagcaagt ctcattgtgg cacccccagc gcgacaccct atcctaaaga
     2041 gacaaaatat gcaccatcgg atatggcaaa agatcgcgct tggttgacca ccatcaaggc
     2101 cggtcggccg ttgcagttca tactgggggc atgatcgctg gtgctcatgc cgatgcatgg
     2161 tgatcttaga tgcggccggg ccggaa
//
LOCUS       DATIKR010000706         1981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_203966, whole genome shotgun sequence.
ACCESSION   DATIKR010000706 DATIKR010000000
VERSION     DATIKR010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203966"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VLL76_11235"
     CDS             complement(<1..567)
                     /locus_tag="VLL76_11235"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HSV30127.1"
                     /translation="MLALGLMSGTSLDGVDAALVVTDGIGIERLGASLTLAYDATLRE
                     RLRAVLGGKGEVAAVERDVTLFHAEAVNRLLAENGLSPAEIDVVGFHGHTILHRPHER
                     RTWQIGDGQLLADSLGIPVVNDFRTKDVLAGGQGAPLVPVFHRALAAGLPRPVAVLNL
                     GGVGNVTWIGEDDQVLAFDTGPGNALIDD"
     gene            664..1914
                     /gene="tyrS"
                     /locus_tag="VLL76_11240"
     CDS             664..1914
                     /gene="tyrS"
                     /locus_tag="VLL76_11240"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HSV30128.1"
                     /translation="MTNVRSEFLRVVTERGFLHQCTDLEGLDKRLTEGPVSAYIGFDC
                     TADSLHVGSLLPIMLLRWWQKTGNKPVVLMGGATTRIGDPTGRDESRKMLSDADIAAN
                     MAGIQKVFDKYLTFGAGTTDAMMVNNADWLNGLNYIDFLRDYGVHFTINRMLTFDSVK
                     LRLEREQPMTFLEFNYMILQGYDFAELWSRHKIALQMGGSDQWGNIINGVELGRRVHQ
                     AELFGLTSPLLTTASGAKMGKSASGAVWLNQEKLSNWDFWQFWRNTEDADVGRFLKLF
                     TELPLAEIAKLEALQGAEINEAKKILANEVTRLARGEAAAQEAAETARKTFEQGVAAD
                     TLPTVTVPKAELEAGIAAFALFVKAGLAASNGEARRLIQQGGAKVNDVAVKDAMDVVG
                     AKDLVDGAIKLTAGKKRHVLVKPE"
BASE COUNT          356 a          668 c          656 g          301 t
ORIGIN      
        1 atcgtcgatc agggcgttgc ccggcccggt gtcgaaggcc agcacctggt cgtcctcgcc
       61 gatccaggtg acgttgccga cgccgcccag gttcagcacc gctaccgggc gcggcagccc
      121 ggccgccagt gcacgatgga acaccggcac cagcggcgcg ccctggccgc cggccagcac
      181 gtccttggtg cggaagtcgt tgaccaccgg gatgcccagg ctgtcggcca gcaactggcc
      241 gtcgccgatc tgccaggtgc ggcgctcgtg cgggcgatgc aggatggtgt ggccatggaa
      301 gccgaccacg tcgatctcgg cgggcgacaa gccgttttcg gccagcaggc ggttcaccgc
      361 ctcggcatgg aacagggtga cgtcgcgctc gacggcggcg acctcgccct ttccgcccag
      421 cacggcgcgc agccgctcgc gcagggtggc gtcgtaggcc agcgtcagcg acgcgcccag
      481 gcgctcgatt ccgatcccgt cggttaccac cagggcggca tcgacgccgt cgagcgaagt
      541 gccgctcatc agcccgaggg caagcatggt catggcagca gatcgccccg gcaagttgtg
      601 acgtggccgg gattgtgcta aacgagcggc ctttccgcaa gcaagcgaac ggcattgcca
      661 aaaatgacca atgtgcgatc cgaattcctg cgcgtcgtca ccgaacgcgg tttcctgcac
      721 cagtgcaccg acctcgaagg cctggacaag cgcctgacgg aaggtccggt gtcggcctat
      781 atcggcttcg actgcaccgc cgattcgctg catgtgggct cgctgctgcc gatcatgctg
      841 ctgcgctggt ggcagaagac cggcaacaag ccggtggtcc tgatgggtgg tgccaccacc
      901 cgcatcggcg accccaccgg acgcgacgaa tcgcgcaaga tgctgtcgga cgccgacatc
      961 gccgccaaca tggccggcat ccagaaggtg ttcgacaagt acctgacctt cggcgccggc
     1021 accaccgacg ccatgatggt caacaacgcc gactggctga acggcctgaa ctacatcgac
     1081 ttcctgcgcg attacggcgt gcacttcaca atcaaccgga tgctgacgtt cgattcagtg
     1141 aagctgcggc tggaacgcga gcagccgatg accttccttg aattcaacta catgatcctg
     1201 cagggctacg acttcgccga gctgtggtcg cgccacaaga tcgcgctgca gatgggcggt
     1261 tcggaccagt ggggcaacat catcaacggc gtcgagctgg gccgccgggt ccaccaggcc
     1321 gagctgttcg gcctgacctc gccgctgctg accaccgcgt cgggcgccaa gatgggcaag
     1381 tcggcctcgg gcgccgtgtg gctgaaccag gaaaagctgt ccaactggga tttctggcag
     1441 ttctggcgca acaccgagga cgccgacgtc ggccgcttcc tcaagctgtt caccgagctg
     1501 ccgctggccg agatcgccaa gctggaggcg ctgcagggcg ccgagatcaa cgaggccaag
     1561 aagatcctgg ccaacgaggt cacccggctg gcgcgcggtg aagccgccgc ccaggaagcc
     1621 gccgaaaccg ctcgcaagac cttcgagcag ggcgttgccg ccgacaccct gccgaccgtc
     1681 accgtgccga aggccgaatt ggaggccggt atcgccgcct tcgccctgtt cgtcaaggcc
     1741 ggcctggccg cctccaacgg cgaggcccgc cgcctgatcc agcagggcgg cgccaaggtc
     1801 aacgacgtcg cggtcaagga cgccatggat gtggtgggcg ccaaggacct ggtcgacggc
     1861 gccatcaagc tgaccgccgg caagaagcgc cacgttctgg tgaagccgga ataaggcggg
     1921 ctactggaag tcgcggctct tggtccgcaa gggctcggct tccggcagca ggcgggtcag
     1981 c
//
LOCUS       DATIKR010000707         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83590, whole genome shotgun sequence.
ACCESSION   DATIKR010000707 DATIKR010000000
VERSION     DATIKR010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83590"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1330)
                     /locus_tag="VLL76_11245"
     CDS             complement(<1..1330)
                     /locus_tag="VLL76_11245"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HSV30129.1"
                     /translation="MQDQSLEAADPPRDEVAFTIGEEMSRWAKAVNALILLTVVSASV
                     AFVWLMSSLPRIEGRMPIKGLNMTATVARDHYGVPRITARSVRDAYFAMGWVHSQDRL
                     WQMELQRRVGAGRLAEIVGDKGLPNDRFMRTLGLYRLAEAGFDKLDKPTRDALTAYAE
                     GVNAWTDAHWHRLPVEFVLLGVRPEPWKPADTLVWARLMALQLTGNWRDELLKARLAG
                     KLDARRMGELWPGYPGDAPVTISQGPAKALLDAMPEAAEPRLASNVWAVAGSRTATGK
                     PLLANDPHLGFQAPVLWYLAGIEAPGLSVVGATVPGVPFHLIGHNGRIAWGTTTTHAD
                     TVDLFVEKAAGADAYMTPEGPRPFVSRDEVIRVKGGDDQVLKVRSTRHGPVISDLIGR
                     PGEIVAMRATALEPDDLTAQAMMRVNRAVDWKGFQAALRDFAAPVQNFAFA"
     gene            1497..1901
                     /gene="mce"
                     /locus_tag="VLL76_11250"
     CDS             1497..1901
                     /gene="mce"
                     /locus_tag="VLL76_11250"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HSV30130.1"
                     /translation="MIGKLNHVAIAVPDLEAATRLYRDTLGAKVSDPVPQPAHGVTVV
                     FVELPNTKIELLHPLGEKSPIAAFLEKNASGGIHHVCYEVEDIYAARDRLKAQGARVL
                     GDGEPKIGAHDKPVLFLHPKDFVGTLVELEQA"
     gene            1953..>2324
                     /locus_tag="VLL76_11255"
     CDS             1953..>2324
                     /locus_tag="VLL76_11255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSV30131.1"
                     /translation="MPIHADFVHLRTHTAYSLSEGAIKIKQLAKLCEKMAMPAVGIAD
                     TGNLFGALEFSTSCADAGIQPLIGCQVALRREADGPSKDGRRPDPDWVVLICQNEAGY
                     FNLMKLVSKAYLETDAGETPQV"
BASE COUNT          393 a          795 c          776 g          360 t
ORIGIN      
        1 cggcgaaggc gaagttctgc accggcgccg cgaagtcacg caacgccgcc tggaatccct
       61 tccagtccac cgcccggttg acccgcatca tcgcctgcgc cgtcaggtcg tcgggctcca
      121 gcgcggtggc ccgcatggcg acgatctcac cgggccggcc gatcaggtcc gagatcaccg
      181 ggccgtggcg ggtggagcgc accttcaaca cttggtcgtc gccacccttg acgcggatca
      241 cctcgtcgcg gctgacgaag gggcgggggc cctccggggt catgtaggca tcggcgccgg
      301 cggccttctc gacgaacagg tcgacggtgt cggcgtgggt ggtggtggtg ccccaggcga
      361 tgcggccgtt atggccgatc aaatggaacg ggacgccggg cacggtggcg cccaccaccg
      421 acaggcccgg cgcttcgatg ccggccaggt accacagcac cggcgcctgg aagccgagat
      481 gggggtcgtt ggccagcagc ggcttgccgg tggcggtgcg cgacccggcc accgcccaga
      541 cgttcgaggc caggcgcggc tcggccgcct cgggcattgc atccagcagg gccttggcgg
      601 ggccctggct gatggtcacc ggcgcgtcgc cgggatagcc cggccacagc tcgcccatgc
      661 ggcgggcatc cagcttgccc gccagccttg ccttcagcag ttcgtcgcgc cagtttccgg
      721 tcaattgcag cgccatcagc cgcgcccaca ccagcgtgtc ggcgggcttc cacggctcgg
      781 ggcgcacgcc cagcagcacg aattccaccg gcaggcggtg ccagtgggca tcggtccagg
      841 cgttgacgcc ctcggcatag gcggtcaggg cgtcgcgggt cggcttgtcc agcttgtcga
      901 aaccggcttc ggccaggcgg taaagcccca gcgtgcgcat gaagcggtcg ttgggcaggc
      961 ccttgtcgcc gacgatctcg gccaggcggc cggcgcccac gcggcgctgc agctccatct
     1021 gccacaggcg atcctgggaa tgcacccagc ccatggcgaa ataggcgtcg cgcaccgacc
     1081 gcgccgtgat gcgcggcacg ccgtaatggt cgcgtgccac cgtcgccgtc atgttcaggc
     1141 ccttgatggg catgcggccc tcgatccggg gcagcgagct catcagccac acgaaggcga
     1201 ccgaagccga gaccacggta aggagaatga gcgcattgac ggccttggcc caccggctca
     1261 tctcttcgcc gatagtgaaa gccacctcgt cgcgaggcgg atcggcggct tcgagagact
     1321 ggtcctgcac gaaatgggac tccgattgcg gcggacagca ggtggggcga ggaaagtggt
     1381 agtcggttgg tttcccaagc gcaagtctct ttgggcgcgc gaaaggcatc atttaatgtg
     1441 tgcggtgcac tatgttatac ggatcgccca acaaccaacc agacgaggac gccgaaatga
     1501 tcggtaagct caaccacgtc gccattgccg ttcccgacct cgaggcggcg acccggctgt
     1561 accgcgacac ccttggcgcc aaggtctccg acccggtgcc gcagccggcc cacggcgtca
     1621 ccgtggtgtt cgtcgagctt cccaacacca agatcgagct gctgcatccc ctgggggaaa
     1681 agtcgccgat cgccgcgttc ctggaaaaga acgcttcggg cggcatccac cacgtctgct
     1741 acgaggtcga ggacatctat gccgcccgcg accgcctgaa ggcgcaaggc gcccgcgtgc
     1801 tgggcgacgg cgaacccaag atcggcgccc acgacaagcc ggttctgttc ctgcatccca
     1861 aggacttcgt cggcaccctg gtcgagctgg aacaggcgta agagaccgcg ccggggtgga
     1921 cgaagccccc ctggtcgggc catcatgcgg ccatgccgat ccacgccgac ttcgtccacc
     1981 tccgcaccca caccgcctat tcgctgtccg aaggcgccat caagatcaag cagcttgcca
     2041 agctgtgcga gaagatggca atgccggccg ttggcatcgc cgacaccggc aacctgttcg
     2101 gggcgctgga attctcgacc tcctgcgccg atgccggcat ccagccgctg atcggttgcc
     2161 aggtggcgct gcgccgcgag gccgacggcc ccagcaagga tggccgccgg cccgaccccg
     2221 attgggtggt gctgatctgc cagaacgagg ccggctattt caacctgatg aagctcgttt
     2281 cgaaggcgta tctggaaacg gatgccggtg aaacgcctca ggtc
//
LOCUS       DATIKR010000708         1955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_10722, whole genome shotgun sequence.
ACCESSION   DATIKR010000708 DATIKR010000000
VERSION     DATIKR010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10722"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..714)
                     /locus_tag="VLL76_11260"
     CDS             complement(<1..714)
                     /locus_tag="VLL76_11260"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSV30132.1"
                     /translation="MRILLAAALAVMMAVPAMAEVVTEKTGWKNPKDGTDVPAYVFYD
                     PAKARPDGTHPAILFLHARRGIQEADKKYLAEIAAEGFLVLAPDWQTGRFIEAWPVPH
                     DPATELDAALGLDQFKTMKRVRPNEKRALFGYSRGGYYAVRIAAGALDPRHKDQVACV
                     VAIAGHFQDPNRPEADQVYRTMPELDTLSQPVMMVIGEDDTGARVDNNARAFYSLVDR
                     GADVELVYLPKARRAFDFRD"
     gene            complement(862..1533)
                     /gene="lipB"
                     /locus_tag="VLL76_11265"
     CDS             complement(862..1533)
                     /gene="lipB"
                     /locus_tag="VLL76_11265"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HSV30133.1"
                     /translation="MAHRESSVHSRRAMTTPIEWRISDEFVAYPEALAFMEARVAAIR
                     AGEAPECVWLLEHPPLYTAGTSAKPEDLVDPDRFPVFDAGRGGQYTYHGPGQRVAYVM
                     LDLKQRGGDLRGYVRDLEEWIIRTLARFTVKGERRDGRVGIWVDRGAGREDKIAAIGV
                     RVRHWVTFHGIALNVDPDLSHFQGIVPCGIREHGVTSLWDLGNTPTMEEVDSALMATF
                     PEVFG"
     gene            1593..1677
                     /locus_tag="VLL76_11270"
     tRNA            1593..1677
                     /locus_tag="VLL76_11270"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1627..1629,aa:Leu,seq:gag)
BASE COUNT          339 a          598 c          657 g          361 t
ORIGIN      
        1 gtcgcggaag tcgaaggcgc ggcgggcctt gggcaggtag accagttcga cgtcggcgcc
       61 gcggtccacc agggaataga aggcgcgggc gttgttgtcg acgcgggcgc cggtgtcgtc
      121 ctcgccgatc accatcatca cgggctgaga cagggtgtcc aactcgggca tggtgcgata
      181 gacctgatcg gcctcgggcc ggttggggtc ctggaaatgg ccggcgatgg cgacgacgca
      241 ggccacctgg tccttgtggc gcgggtcgag cgcgccggcg gcgatgcgga cggcgtaata
      301 gccgccgcgc gaatagccga acagcgcccg cttctcattg ggccgcaccc gcttcatggt
      361 cttgaactga tccagcccca gggcggcatc cagttcggtg gcgggatcgt ggggcaccgg
      421 ccaggcttcg atgaagcggc cggtctgcca atcgggcgcc aggaccagga agccctcggc
      481 ggcgatctca gccaggtatt tcttgtcggc ctcctggatg ccgcgccggg cgtgcaggaa
      541 caggatggcg ggatgggtgc cgtcgggccg cgccttggcg gggtcgtaga acacataggc
      601 gggcacgtcg gtgccgtcct tcgggttctt ccagccggtc ttctcggtga cgacctcggc
      661 catggccggg acggccatca tcaccgccaa cgcggcggca agcaggatgc gcattgactg
      721 tctcctcccg tggggtccgg ctctggcggc cggtaccagg ggagtatgga ctagagtcgg
      781 ttccattcaa atggaaccga ctctaggttt gcctttggcg atcgcccctc cggggcgagc
      841 cagctcaggc gccgctcggg cttagccgaa cacctcgggg aaggttgcca tcagcgccga
      901 atccacctct tccatggtcg gggtgttgcc caggtcccac agcgaggtga cgccgtgctc
      961 gcggatgccg cacggcacga tgccctggaa atggctgagg tcgggatcga cgttgagggc
     1021 gatgccgtgg aaggtgaccc aatggcggac gcgcacgccg atggcggcga tcttgtcctc
     1081 gcgccccgcc ccccggtcca cccagatgcc gacgcggccg tcgcggcgct cgcccttgac
     1141 ggtgaagcgg gccagcgtgc ggatgatcca ttcctcgagg tcgcgcacgt aaccgcgcag
     1201 gtcgccaccg cgctgcttga ggtccagcat cacataggcc acgcgctggc cggggccgtg
     1261 ataggtgtat tgcccgccgc gcccggcgtc gaacaccggg aagcggtcgg gatcgaccag
     1321 atcctcgggc ttggcgctgg tgccggcggt atagagcggt ggatgttcca gcagccagac
     1381 gcattccggc gcctccccgg cccggatggc ggccacccgc gcctccatga acgccagcgc
     1441 ctccgggtag gcaacgaatt catccgatat ccgccactcg atcggggtgg tcatggctct
     1501 cctggaatgt acgcttgatt cgcggtgggc gatttggtat tcccctgcat cctcgttggc
     1561 aagagctttg ccggcgagtg actaccagct atgcgaccgt ggcggaactg gtagacgcgc
     1621 acgcttgagg tgcgtgtgac gaaagtcgtg ggagttcgag tctccccggt cgcaccaaat
     1681 tgaaaacccc gcgaaggcca agtccgtcgc ggggtttttc atgtctttag actaaaaatc
     1741 aaaaacgcca aaatgcataa aattgcgcgc aatttgtttc tgtcattcat cgatagggca
     1801 taagcaatat accagggtat tagagacctc cctcgcccga aggaatatcc ctcaggacaa
     1861 tttctcaacc aaccgttaac gtgttttatt gtcgtcaacg gtaacgattt gtgacgacag
     1921 ggaggccgac atgggcgctt tcgatgaaat ggttc
//
LOCUS       DATIKR010000709         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_131500, whole genome shotgun sequence.
ACCESSION   DATIKR010000709 DATIKR010000000
VERSION     DATIKR010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131500"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1478)
                     /gene="ilvD"
                     /locus_tag="VLL76_11275"
     CDS             complement(<1..1478)
                     /gene="ilvD"
                     /locus_tag="VLL76_11275"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007417093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSV30134.1"
                     /translation="MKRMSAAARSPRPFSSVFLDGPDRAPTRALLYPVGFKAEDFSKP
                     IVGIASMWSMVTPCNMHIDKLALEAEKGANEAGGKAIVFNTITMSDGIAMGTEGMKYS
                     LVSREVIADSIETVVGAEGMDGFVAIGGCDKNMPGAMITIARMNRSAVFVYGGTILPG
                     CLTMDPQKKLDIVSVFEAVGQHAAGKLDDAGLQAIESCAIPGPGSCGGMYTANTMASA
                     IEAMGMSLPNSSAQNAVSPAKLDDCRRAGAAVVHMLKTGLRPLDIMTKKAFENAITMI
                     IALGGSTNAVLHLPAMAHAARIKVTIDDFARIGKRVPVLANLKPSGAHFMSELVAIGG
                     IRPLMKTLLDAGLLHGDCLTVTGQTLAETLAGTKPYPDGQTIIRPLNDPVKKDSHLVI
                     LRGNLAPEGAVAKISGKEGLRFEGKAIVFDGEEKASKAILKGNVKKGHVVVIRGEGPK
                     GGPGMREMLSPTSAIMGRGLGRDVALITDGRFSGATRGFCIG"
BASE COUNT          261 a          471 c          575 g          300 t
ORIGIN      
        1 tggccgatgc agaagccgcg cgttgcgccg ctgaaccgcc cgtcggtgat gagcgccacg
       61 tccctgccca agccccggcc catgatggcg cttgtgggcg aaagcatctc gcgcatgccg
      121 gggccgccct tcgggccttc accgcgaatg accacaacgt ggcccttctt gacattgcct
      181 ttgaggatgg ccttcgacgc cttttcctcg ccatcaaaca cgatggcctt gccttcaaac
      241 cgaagccctt ccttgccgga aatcttggcg accgcgcctt cgggagccag gttgccgcgc
      301 aggatgacaa ggtggctgtc ctttttgacc gggtcattca acggacggat gatggtctgc
      361 ccgtcggggt agggttttgt gccggccaga gtctcggcca gggtctggcc ggtgacggtg
      421 aggcagtcgc catgcagcag gccggcgtcg agcagggtct tcatcagcgg acggatgccg
      481 ccgatggcga caagttcgga catgaaatgc gcgccgctgg gcttgaggtt ggcaagcacg
      541 ggcacgcgtt tgccgatgcg cgcaaagtcg tcaatggtca cttttatcct cgccgcgtgg
      601 gccatggcgg gcaggtgcaa cacggcgttg gtcgagccgc ccagcgcgat gatcatggtg
      661 atcgcgttct cgaacgcctt cttcgtcatg atgtcgagcg ggcgcagccc ggtcttgagc
      721 atgtggacga cggcggcgcc ggcgcggcgg cagtcgtcca gcttggcggg ggagacggcg
      781 ttttgggcgg aactgttggg caggctcatg cccatcgcct cgatggcgct ggccatggtg
      841 ttggcggtgt acatgccgcc gcaggagccg gggccgggga tggcgcagga ttcgatggcc
      901 tgcaggccgg cgtcgtcgag cttgcccgcc gcgtgctgcc ccacggcctc gaacacagag
      961 acgatgtcga gcttcttttg cgggtccatc gtcaggcagc cgggcaggat ggtgccgcca
     1021 tacacaaaca cggcggagcg gttcatgcgg gcgatggtga tcatcgcgcc gggcatgttt
     1081 ttgtcgcatc cgccgatggc cacgaagccg tccatgcctt cggcgccgac gacggtttcg
     1141 atggagtcgg cgatgacctc gcgcgagacg agcgaatact tcatgccctc ggtgcccatc
     1201 gcgatgccgt cggacatggt gatggtgttg aagacgatgg ccttgccgcc ggcttcgttc
     1261 gcgcccttct cggcttcgag cgcgagcttg tcaatgtgca tgttgcacgg cgtgaccatg
     1321 ctccacatgg aggcgatgcc gacgatgggc ttgctgaaat cctcggcctt gaagccaacg
     1381 ggatacagca gggcgcgggt gggtgcgcgg tcggggccgt cgaggaaaac gctcgagaag
     1441 gggcgcggtg aacgagcggc tgcagacatg cgtttcatgc cgggagtata gcgtgtcgcg
     1501 gccggacgaa caagccctta caaggcgcgg gagggaggct gcattggaaa agaggagggc
     1561 cgcgcgggtg cggaggaggg ggcggttgac tcataacgat gctggcc
//
LOCUS       DATIKR010000710         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_167954, whole genome shotgun sequence.
ACCESSION   DATIKR010000710 DATIKR010000000
VERSION     DATIKR010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167954"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..103
                     /locus_tag="VLL76_11280"
     CDS             <1..103
                     /locus_tag="VLL76_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012286846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pantothenate kinase"
                     /protein_id="HSV30135.1"
                     /translation="PLFADATSMIDTLDPDLTLRGLLEIHRRNARLE"
     gene            105..>1609
                     /locus_tag="VLL76_11285"
     CDS             105..>1609
                     /locus_tag="VLL76_11285"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HSV30136.1"
                     /translation="MSELFFLPLGGAGEIGMNLNLYGFGGKWLMVDLGVSFGDETMPM
                     IDVVMPDPAWIEQRREDLVGLVVTHGHEDHLGAIQYLWPRLRCPVYATPFAAAILQAK
                     LHEVGLQHEVPVHIVELGSRFDVGPFNIEMVSITHSIPEPNCVAIRTKAGTVLHTGDW
                     KFDPDPLVGLPTDTEKLRKLGKEGVLALVGDSTNAMTNGSSGSEAEVRANLIEVLGRY
                     DGKIAVTCFATNVARLESVALAAEANNRRVALVGRSLWRIEKAARELGYLKDIAPFLT
                     DHDAGYMPDREIVFLCTGSQGEPRAALARIAGNNHPHVVMGKGDTVIFSSRVIPGNEK
                     AIFKLQNDLVKLGVEVVTERDAFIHVSGHPARDELTEMYNLVRPQIAIPVHGEARHIK
                     EHAELALACQVKQALRIENGAMVRLAPGPAEVVDHVPTGRLAVDGQDFDGGPRLVRTD
                     SDILRDRRRMVFNGSAVCTLVIDGKGKLLGDPQLTALGLLDADRAAEEHDEV"
BASE COUNT          269 a          569 c          524 g          247 t
ORIGIN      
        1 gcccttgttc gccgacgcca catccatgat cgacaccctg gaccccgacc ttacgctgcg
       61 cggcctgttg gagatccatc gccgcaacgc acgactggag tagtatgagc gagcttttct
      121 tcctgccctt gggcggcgcc ggcgagatcg gcatgaacct gaacctgtac gggttcggcg
      181 gcaaatggtt gatggtcgac ctgggcgtgt cgttcggcga cgagaccatg ccgatgatcg
      241 acgtggtgat gcccgatccc gcctggatcg aacagcgccg cgaggacctg gtcggcctgg
      301 tggtgaccca cggccacgag gaccacctgg gcgccatcca gtatctgtgg ccgcgcctgc
      361 gctgccccgt ctacgccacg cccttcgccg ccgccatcct gcaggccaag ctgcacgagg
      421 tgggcctgca gcacgaggtg ccggtccaca tcgtcgaact gggctcgcgc ttcgacgtcg
      481 gcccgttcaa catcgagatg gtgtccatca cccactcgat ccccgagccc aattgcgtcg
      541 ccatccgcac caaggcgggc acggtgctgc acaccggcga ttggaagttc gaccccgatc
      601 cgctggtcgg cctgcccacc gacaccgaga agctgcgcaa gctgggcaag gaaggcgtgc
      661 tggcgctggt cggcgattcc accaacgcca tgaccaacgg ctcgtccggg tcggaagccg
      721 aggtgcgcgc caatttgatc gaggtgctgg gccgctatga cggcaagatc gcggtgacct
      781 gcttcgccac caacgtcgcc cgcctggaaa gcgtcgccct ggccgccgag gccaacaacc
      841 gccgcgtcgc cctcgtgggc cggtcactgt ggcgcatcga gaaggcggcc cgcgagttgg
      901 gctacctcaa ggacatcgcg ccgttcctga ccgaccacga cgccggctac atgccggatc
      961 gcgagatcgt gttcctgtgc accggcagcc agggcgagcc gcgcgccgcg ctggcccgca
     1021 tcgccggcaa caaccatccc cacgtggtca tgggcaaggg cgacacggtg atcttctcgt
     1081 cgcgtgtcat ccccggcaac gaaaaggcca tcttcaagct gcagaacgac ctggtgaagc
     1141 tgggcgtcga ggtggtgacg gagcgggacg ccttcatcca cgtctcgggc catcccgccc
     1201 gcgacgaact gaccgagatg tacaatctgg tgcggccgca gatcgccatc cccgtgcacg
     1261 gcgaggcccg ccacatcaag gaacacgccg aactggcgct ggcctgccag gtcaagcagg
     1321 cgctgcgcat cgagaacggc gccatggtgc ggctggcgcc cggcccggcc gaggtggtcg
     1381 accacgtccc caccggccgt ctggccgtgg acggccagga tttcgacggc ggcccgcgcc
     1441 ttgtgcgcac cgacagcgac atcctgcgcg accgccgccg catggtgttc aacggctcgg
     1501 ccgtctgcac cctggtgatc gacggcaagg gcaagctgct gggtgacccg cagctcaccg
     1561 ccctgggcct gctggatgcc gaccgcgccg ccgaggagca tgacgaggt
//
LOCUS       DATIKR010000711         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_107664, whole genome shotgun sequence.
ACCESSION   DATIKR010000711 DATIKR010000000
VERSION     DATIKR010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107664"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /gene="sat"
                     /locus_tag="VLL76_11290"
     CDS             <1..338
                     /gene="sat"
                     /locus_tag="VLL76_11290"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012475233.1"
                     /note="ATP sulfurylase; ATPS; converts ATP and sulfate to
                     5'phosphosulfate and pyrophosphate; in some organisms this
                     enzyme is involved in the incorporation of inorganic
                     sulfate while in others it is involved in the production
                     of ATP in the reverse direction; the enzyme from Thermus
                     thermophilus is dimeric and binds a zinc ion that is
                     coordinated by cysteine and histidine residues that are
                     not found in all related proteins but is found in some
                     thermophilic organisms; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HSV30137.1"
                     /translation="IRQNFGCSHLIVGRDHAGVGDYYGPFDAQHIFDTLWPGAMDTQP
                     LKIDITFFCTKCYGMATAKTCPHGKEHQINISGTKQREMLGKGEDIPPEFSRPEVVRI
                     LQEYYQSLK"
     gene            418..1677
                     /locus_tag="VLL76_11295"
     CDS             418..1677
                     /locus_tag="VLL76_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020504182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV30138.1"
                     /translation="MTEATSRSRTIMVVGGGIAGITAAVEAAEAGHDVVLIEKTATLG
                     GRVAQMNRYFPKLCHPTCGLEINYQRIKKSKRINLFTMSSVAAIKGGPGAYTVTVKTA
                     PRHVKPNCTACGDCAAAAESEVANPFNYGMDKVKAAYLPHTMAFPMRYVVDPSVVGTP
                     EGDKIKAACKVGAVDLDETESSFDLEVGAIVWATGWRPYPAENLTAYRWADLPNVVTN
                     VEFERLASVDGPTKGRILRPSDGAEPKKIALIQCAGSRDLNHLAYCSRICCLASMKHA
                     AYVREQYADAQVDVYYIDLRAHDKLESFVQRLKRDPQVRFVKSKPARIEMGEGGNPVV
                     CGENTLTREVYAEPYDMVVLATGMEPSLAAGDKPQIAAEFDDYGFVFPEGESIGAGVA
                     TGALDVSMSVQSATAAALKAIRVVTAG"
     gene            1691..>2387
                     /locus_tag="VLL76_11300"
     CDS             1691..>2387
                     /locus_tag="VLL76_11300"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV30139.1"
                     /translation="MSERKTGVYLCSGCGIGDSLNMAALEGVAKTEYKLEPKAHACLC
                     ADEGVAMIRADVEAGTNQVVVAACSSRVMTDRFAFEPAAQVIRVDLREKVTWSHPAGD
                     EDTQMLGEDYLRMGLSHAPKVSLPEPWIDGEYSQRIMVLGGGVTGLTAATEAAALGHD
                     VLLVERSDRLGGHALEASKRLPHTPPYDKPEANGVEALVASVKANGKITVKMSADVTR
                     TAGMPGKFAVTFAD"
BASE COUNT          440 a          812 c          787 g          348 t
ORIGIN      
        1 tgatccgcca gaacttcggc tgctcgcacc tgatcgtcgg acgcgaccat gccggcgtcg
       61 gcgattatta cggcccgttc gacgcccagc acatcttcga caccctgtgg ccgggcgcca
      121 tggatacgca gccgctgaag atcgacatca cgttcttctg caccaagtgc tacggcatgg
      181 cgaccgccaa gacctgcccg cacggcaagg agcaccagat caacatctcg ggcaccaagc
      241 agcgcgagat gctgggcaag ggcgaggaca tcccgccgga attcagccgc cccgaggtgg
      301 tgcggatcct gcaggaatat taccagtctc tgaaataacc gagaaccggc aggccctccg
      361 tccgcggcgg ggggcccaag cctgcgcgaa aaacggatga caagagagag gggaaacatg
      421 accgaagcga catcccgcag ccgcacgatc atggtcgtgg gcggcggtat cgccggcatc
      481 acggccgccg tcgaggcagc cgaggccgga cacgacgtgg tcctgatcga aaagaccgcg
      541 accttggggg gccgggtcgc ccagatgaac cgatatttcc ccaagctgtg tcatccgact
      601 tgcggcctgg agatcaacta ccagcgcatc aagaagtcca agcgcatcaa cctgttcacc
      661 atgagcagcg tggccgccat caagggcggg ccgggcgcct atacggtgac ggtcaagacc
      721 gcgccgcgcc atgtgaagcc caactgcacc gcctgtggcg attgcgcggc ggccgccgag
      781 tccgaggtgg cgaacccgtt caattacggc atggacaagg tcaaggcggc ctatctgccg
      841 cacaccatgg ccttccccat gcgctacgtg gtcgatccct cggtggtcgg tacgcccgag
      901 ggcgacaaga tcaaggccgc ctgcaaggtt ggcgcggtgg atctggacga gacggaaagc
      961 tcgttcgacc tcgaggtcgg cgccatcgtg tgggcgaccg gctggcgtcc ctatccggcc
     1021 gagaacctga ccgcctatcg ctgggccgac ctgcccaacg tggtcaccaa tgtggaattc
     1081 gagcgtctgg cctcggtcga cggccccacc aagggccgca tcctgcgccc cagcgacggc
     1141 gccgagccca agaagatcgc gctgatccag tgcgccggct cgcgcgacct caaccacttg
     1201 gcctattgct cgcgcatctg ctgcctggcg tcgatgaagc acgccgccta cgtccgcgag
     1261 caatacgccg acgcccaggt ggacgtgtac tacatcgacc tgcgcgccca cgataagctg
     1321 gaaagcttcg tccagcgcct caagcgcgac ccgcaggtgc gcttcgtcaa gtccaagccc
     1381 gcccgcatcg agatgggcga gggcggcaac cccgtcgtgt gcggcgagaa caccctgacc
     1441 cgcgaggtct atgccgagcc ctacgacatg gtcgtgctgg ccaccggcat ggagccgtcg
     1501 ctggcggcgg gcgacaagcc gcagatcgcg gccgagttcg acgattacgg cttcgtcttc
     1561 cccgagggcg agtccatcgg tgccggtgtc gccaccggcg ccttggacgt gtccatgtcg
     1621 gtgcaatccg ccaccgcggc ggccttgaag gccatccgcg tcgtgaccgc cggttaaggg
     1681 ggaagagaag atgagcgaac gtaagaccgg cgtttacctg tgcagcggct gcggcatcgg
     1741 tgattcgctg aacatggccg cgctcgaggg cgtggcgaag accgaataca agctggagcc
     1801 caaggctcac gcctgcctgt gcgccgacga gggcgtggcg atgatccgcg ccgacgtcga
     1861 ggccggcacc aaccaggtgg tggtcgccgc ctgttcgtcg cgcgtgatga ccgaccgctt
     1921 cgccttcgag ccggcggccc aggtgatccg cgtcgatctg cgcgagaagg tgacctggag
     1981 ccatcccgcc ggcgacgagg acacccagat gctgggcgag gattacctgc gcatgggcct
     2041 gtcccacgcg cccaaggtca gcctgcccga gccgtggatc gacggcgagt attcccagcg
     2101 catcatggtg ctgggcggcg gcgtcaccgg cctgacggcg gccaccgagg cggcggccct
     2161 gggccacgac gtgctgctgg tcgagcgcag cgaccgcctg ggcggccatg cgctggaggc
     2221 gtcgaagcgc ctgccgcaca cgccgcccta cgacaagccc gaggccaacg gcgtcgaggc
     2281 cctggtcgcc tcggtcaagg ccaacggcaa gatcaccgtc aagatgagcg ccgacgtcac
     2341 ccgcaccgcc ggcatgcccg gcaagttcgc ggtgaccttc gccgacg
//
LOCUS       DATIKR010000712         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_167968, whole genome shotgun sequence.
ACCESSION   DATIKR010000712 DATIKR010000000
VERSION     DATIKR010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167968"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2005
                     /locus_tag="VLL76_11305"
     CDS             <1..>2005
                     /locus_tag="VLL76_11305"
                     /inference="COORDINATES: protein motif:HMM:NF024353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /protein_id="HSV30140.1"
                     /translation="GGSLNVVKLGTGTVRLMDPSTYNGSTTIYNGILHFESPASVGGS
                     GQSVVLNSNVASNTFGVAGLGAGFDHSNIKGTFLNRLDYGSEGVVALSSDSNENFDFT
                     DAGLNLPPSIYLGSLGEVIYTGTITNWTGEYRLGGGGGTLYVGDPANPVPNRLTGGNI
                     LVIGGAPGTVVLTGPNDYAGGTMIQRGATLAFSAPDQLGSGLITFDNGTLRLTGPNTV
                     AHTRITGVNAGITIDVPHPAGSLMFTGGFFSTSGGQFHKLGEGAFAMSTNTFDLIDKP
                     FLLRGGTTSIIDGAIVNTVGWTSISVGLVDPNEKATLIVDNAQLIAGGDFNVGDVANS
                     QGTLILRNNASVTARTVYVGKNTTTQGAVLQTGGQFVNGAGFGDWRIGGSFGVGDAQS
                     VGAYTMTGGTFSTAANLQVGAWGRGVMTVAGGTATASNWPAVGRFAGSYGVLNILDTG
                     VFNQTGTGNRMIVGENGAGIVNVADGGALNTVRDVVLALGDGGSGVVNLLPGGTINTI
                     GVRRGVGANRQATFNFHGGTLRATTTGENLMGGLDAAYVWSGGAVIDTNGHDLTVSQA
                     LTAPTGDGLTGVSLASGGAGYVAHPVVEISGGGGTGASATPVIDGSGAITGIRITNPG
                     VGYTSAPTVAIKGGGAAQAAVVDAVTTGSNASTGGLTKIGTGTL"
BASE COUNT          353 a          718 c          640 g          294 t
ORIGIN      
        1 gggcggatcg ctcaatgtcg tcaagctcgg gacgggcacg gtccgcctga tggacccgag
       61 cacgtacaac ggctcgacga ccatctacaa cggcattctg cactttgaga gcccggccag
      121 cgtcggcggg tccgggcaga gcgtcgtgct gaacagcaac gtggccagca acaccttcgg
      181 cgtggcgggt ctgggcgctg gcttcgacca ctccaacatc aagggcactt ttctcaaccg
      241 cctggactat ggatccgaag gcgtcgtcgc cctgtcgtcc gacagcaacg agaacttcga
      301 cttcaccgat gccggcctga acctgccccc ttcgatctac ctcggttcgc tcggcgaagt
      361 catctatacc ggcacgatca caaactggac gggcgagtac cgcctgggcg gcggcggggg
      421 cacgctctac gtgggcgacc cggccaaccc ggttcccaac cgcctcacgg gcggcaatat
      481 tctggtgatt ggcggagcgc cgggcaccgt ggtcctgacc ggacccaatg actacgccgg
      541 gggcacgatg attcaacgcg gcgcaaccct tgcgttcagc gccccggacc agctcggctc
      601 gggcctgatc accttcgaca acggcacgct ccgcctgacc ggccccaaca ccgtcgcgca
      661 cacgcggatc accggcgtca atgcgggcat caccatcgac gtgccccatc cggccgggtc
      721 cctgatgttc accggcggct tcttcagcac cagcggcggg cagttccaca agctcggcga
      781 aggcgcattc gccatgtcca ccaacacctt cgatctcatt gacaagccct tcctgcttcg
      841 tggcggaacg acgagcatca tcgacggggc catcgtgaac accgtcggat ggacgagcat
      901 atccgtcggc ctggtcgatc ccaatgagaa ggcgacgctc atcgtggaca acgcccagct
      961 catcgccggc ggcgacttca acgtgggcga tgtcgccaac tcgcagggca cgctcatcct
     1021 gcgcaacaac gcatccgtca ccgcccgcac ggtctatgtc ggaaagaaca ccacgacgca
     1081 gggcgcggtt ctccagacgg gcggccagtt cgtgaacggc gcaggcttcg gcgactggcg
     1141 catcggcggg tcgttcggcg tcggcgatgc gcagtccgtg ggcgcttaca ccatgaccgg
     1201 cggcacgttc agcaccgccg ccaacctgca agtcggcgcg tggggcagag gcgtcatgac
     1261 cgtcgccggc ggcaccgcca ccgccagcaa ctggccggcc gtcgggcggt tcgccggcag
     1321 ctacggcgtg ctcaacatcc tcgacaccgg cgtcttcaac cagaccggaa ccggcaaccg
     1381 catgatcgtc ggcgaaaacg gcgcgggcat tgtgaacgtc gccgatggcg gcgcgctgaa
     1441 caccgtgcgc gacgtggtgc tggcgctggg cgatggcggc agcggcgtgg tcaacctcct
     1501 gcccggcggc acgatcaaca ccatcggcgt gcggcgcggc gtcggcgcca accgccaggc
     1561 cacattcaac ttccacggcg gcacgctccg cgcaacaacc accggagaaa acctgatggg
     1621 cgggctggat gccgcctatg tctggtccgg cggcgcggtc atcgacacca atgggcatga
     1681 tctgaccgtc agccaggcgc tcaccgcgcc aaccggcgat ggtctgaccg gcgtctcgct
     1741 cgcctcgggc ggcgctggct acgtcgccca tcccgtcgtc gagatcagcg gcggcggcgg
     1801 aaccggcgca tcggccaccc cggtgatcga cggcagcggc gcgatcaccg gcatccgcat
     1861 caccaatccc ggcgtcggct acacctccgc ccccaccgtc gccatcaagg gcggtggagc
     1921 ggcgcaggcg gccgtggtgg atgccgtcac gaccgggtcc aacgccagca cgggcggcct
     1981 gacgaagatc ggcacgggca ccctc
//
LOCUS       DATIKR010000713         3117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_22588, whole genome shotgun sequence.
ACCESSION   DATIKR010000713 DATIKR010000000
VERSION     DATIKR010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22588"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VLL76_11310"
     CDS             complement(<1..316)
                     /locus_tag="VLL76_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSV30141.1"
                     /translation="MGGARATELDSVVIFRLGGEAFGMPVEAVREVVPIAWLAKPPQL
                     PSLVEGILNLGGIAVPVLKLDQVLGLAGARYGLDASILIMKGDAPLGLLVEHVDGVRR
                     LEA"
     gene            complement(500..1585)
                     /locus_tag="VLL76_11315"
     CDS             complement(500..1585)
                     /locus_tag="VLL76_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSV30142.1"
                     /translation="MKPYIVAVFNQKGGISKTTTSTNLAVCLAAHGKSVLVIDLDSQG
                     DSTKSLGVDPAIKRGIYDLFTGQGDLAQVMLPTIFDGVHILPSTYNLAGLEIKLSELK
                     DSQRTLSTIIGHAALDFDYVVIDCPPALGILPINALAAAHAVVIPVTATPYANDGLMR
                     TLPSIKYVQEGLNKNLLLQGVLFTISDRNKTTKKINRLIRDRLGGTVYDAEIPRDNMV
                     IEAATARLPVCVYAPRSQASLEHLNFSREFMERHVSIAAKSGVSVAAPVPREQAIERL
                     SNWQDRYAKRVDRPAGERIKQKRHQLDRMLYGDRSRGERFHLALVHFFIENRFSLAAF
                     LFVVVVAAAMLVGFGLEGMRMLAGAMG"
     gene            complement(2001..2462)
                     /locus_tag="VLL76_11320"
     CDS             complement(2001..2462)
                     /locus_tag="VLL76_11320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV30143.1"
                     /translation="MKKMLKLAAAAAVALGLQAGAAMADECTAAQGLVDKAVAHYKAA
                     GKDKAFADFMNKDNPDWVNGELYVIVSTMEGIFKVHAINPKLIDNPSLPSLKDTNGVM
                     IIQEMIRVGKETPTGGWAKYTWTHPVTKKLAPKQTWVKQADGQLFMAGCYP"
     gene            complement(2482..>3117)
                     /locus_tag="VLL76_11325"
     CDS             complement(2482..>3117)
                     /locus_tag="VLL76_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30144.1"
                     /translation="RLVGSITEINRQVSESSRVADEAVSEAARTDETVKSLTQASTKI
                     GDVVSLINDIASQTNLLALNATIEAARAGDAGKGFAVVASEVKNLANQTARATEEIAG
                     EISAMKNATDQAVHAIDGIVATIGRVSEALTAIAAAVGEQGRATTEISQSVSQAADGT
                     RTVSHGIGEVRRVADEVGTAAANVHATTESLVSEFDRLQSQVDGLVAKLKS"
BASE COUNT          527 a          991 c         1015 g          584 t
ORIGIN      
        1 acgcctccaa ccggcggacg ccatcgacgt gctcgaccag caggcccagc ggcgcgtcac
       61 ccttcatgat caggatggag gcatcaagcc catagcgggc gccagccagc ccgagcacct
      121 ggtcgagctt gagcaccggc acggcgatgc cacccaggtt gaggatgcct tcgaccagcg
      181 acggcaattg cggcggcttg gccagccagg cgatgggcac cacctcgcgc accgcctcga
      241 ccggcatgcc gaaggcttcc ccgcccaagc ggaagatcac tacgctgtcg agttccgtcg
      301 cgcgtgcgcc gcccacgggc gtgccctccc tctggtccgt caccggttat aaccataagg
      361 agtagggtcg gcaatcaagc tgacgatgaa ctctcgacta cgacgatagt gtcattccga
      421 ccgagcaacg cgagtggagg aatctttcac gcaccgacgg cagaaacctt gggtgaaaga
      481 tccggtccga gcgcgcggat catcccatcg ccccggccag catgcgcatg ccttccaggc
      541 cgaaccccac cagcatggcg gcggcgacca ccacgacgaa caggaaggcg gccagcgaga
      601 agcggttctc gatgaagaaa tggaccagcg ccaggtggaa gcgctcgccc cggctgcggt
      661 cgccatagag catgcggtcg agttggtggc gcttctgctt gatgcgctcg ccggccggcc
      721 ggtccacccg cttggcgtag cggtcctgcc agttgctgag gcgttcgatg gcctgttcgc
      781 gcggcaccgg cgccgccacc gacacgccgc tcttggcggc gatgctgacg tggcgttcca
      841 tgaactcgcg gctgaagttg aggtgctcca gcgacgcctg gctgcgcggc gcatagacgc
      901 agaccggcaa ccgcgccgtc gccgcctcga tcaccatgtt gtcgcgcggg atctcggcgt
      961 cgtagacggt gccgcccagt cggtcgcgaa tcagccggtt gatcttcttg gtggtcttgt
     1021 tgcggtcgct gatggtgaac agcacgccct gcagcagcag gttcttgttc agcccctcct
     1081 gcacgtactt gatcgagggc agcgtccgca tcaggccgtc attggcatag ggcgtggcgg
     1141 tcaccgggat caccaccgca tgcgccgccg ccagggcgtt gatgggcagg atgccgagcg
     1201 ccggcgggca gtcgatcacc acgtaatcga aatcgagggc ggcatggccg atgatggtgg
     1261 acagcgtgcg ctgcgaatcc ttgagttccg acagcttgat ctcgaggccg gccagattgt
     1321 aggtggacgg caggatgtgg acgccgtcga agatggtggg cagcatcacc tgggcgagat
     1381 cgccctggcc ggtgaacagg tcgtagatgc cgcgcttgat ggcgggatcg acgcccagac
     1441 tcttggtcga gtcaccctgg gaatcgagat caatgaccaa caccgacttg ccatgtgccg
     1501 ccagacagac ggcaaggttc gtactggtgg tggtcttgga gatccccccc ttttgattga
     1561 acacggcgac gatatagggc ttcatcctaa aatcgcctgt tcgaaattat gaacttcggt
     1621 catcggacgc atactccgat tacatgacca tccccgccct ggcgtattgg atccttgttg
     1681 aaccgtggtg aaaacgaacc cgcccccaca ggatcgcacc cacgccgaac agcttaagca
     1741 tagtggcgga ttctgcgcaa ccgaagacgg cacggttata ctcccaattg aatggagaac
     1801 cggagatctg cggctttttg ctttagtgga atttatcgat cagcaatgcc gcttcacgga
     1861 ttttatacag gaagcgccct tgcccgcgcc acgggtggga agccatagcc gggaagtcac
     1921 gaacgccctg ccccaaatga aagacgccac ccggatgacc gggtggcgcc tgttcgctcg
     1981 cttggccgaa cggcctgtga tcaggggtag cagccggcca tgaacaactg gccgtcggcc
     2041 tgcttcaccc aggtctgctt gggcgccagc ttcttggtca ccggatgggt ccaggtgtac
     2101 ttggcccagc cgccggtggg ggtttccttg ccgacgcgga tcatctcctg gatgatcatg
     2161 acgccgttgg tgtccttcaa cgacggcagc gacgggttgt cgatcagctt gggattgatg
     2221 gcgtgcacct tgaagatgcc ctccatggtg ctgacgatga cgtacagctc gccgttcacc
     2281 cagtcggggt tgtccttgtt catgaagtcg gcgaaggcct tgtccttgcc cgccgccttg
     2341 taatgggcga cggccttgtc caccagcccc tgggcggcgg tgcattcgtc ggccatggcg
     2401 gcgccggcct gaagacccag ggcgacggcc gcggcggcgg ccagcttcag catcttcttc
     2461 acgtcttccc tccctttgcg ttcaagactt gagcttggcg accagcccgt cgacctgcga
     2521 ctgcagccga tcgaattcgg acaccaggct ttcggtggtg gcatgcacgt tggcggcggc
     2581 ggtaccgacc tcgtcggcga cgcggcggac ctcgccgatg ccgtgcgaca ccgtgcgggt
     2641 gccgtcggcg gcttggctga cggactggct gatctcggtg gtggcgcggc cctgctcacc
     2701 caccgcggcg gcgatggcgg tcagcgcctc ggacacccgg ccgatggtgg cgacgatgcc
     2761 gtcgatggcg tgcaccgcct ggtcggtggc gttcttcatg gcgctgattt cgccggcgat
     2821 ttcctcggtg gcgcgcgccg tctggttggc caggttcttg acctcgctgg cgaccacggc
     2881 aaagcccttg ccggcgtcac ccgcgcgggc ggcctcgatg gtggcgttca gggccagcag
     2941 gttggtctgc gaggcgatgt cgttgatcag gctgaccaca tcgccgatct tggtcgaggc
     3001 ctgggtcagg ctcttgaccg tctcgtcggt gcgggcggct tcgctcaccg cctcgtcggc
     3061 gacgcgcgag gattccgaca cctggcgatt gatctcggtg atcgaaccga ccaggcg
//
LOCUS       DATIKR010000714         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47598, whole genome shotgun sequence.
ACCESSION   DATIKR010000714 DATIKR010000000
VERSION     DATIKR010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47598"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            401..2296
                     /locus_tag="VLL76_11330"
     CDS             401..2296
                     /locus_tag="VLL76_11330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV30145.1"
                     /translation="MIGTRKNDDDGTRCAMLPQGLSCALDFAPIGIFVTDPNKPGNPI
                     AFVNQEFERITGYGRHEASGHGLDLLNTDLPSRVAASATSRETITDTLVNHRKSGEPF
                     FMKIEVRPVFDADDRLEAFVGGVMDMTDQHLAQEALAESEERLRAVMIAIPLPMLTLR
                     LDGRIARANTAAHETLRVPPNSLPGRSVFDFIDQDTPARAGALDELDRAGFVAKVEMQ
                     ATRADGGQLWTLVSAKRYTVRGETRTLVVFQDVTELKLKERALTEANEEAERNIRARM
                     RFLAAASHDLRQPLQAMALFASALEHHVATPQGRTIVTSLKTSLRGMEEMFDSLLDMS
                     KLDAGVMKAETSVFLVNDIIEQIEMTYAGQAEAAGLEFRVVPSSAVVRSDRRLLARII
                     GNFVSNAIRYTRKGRVLLGVRHRGDRIRVCVIDTGPGIPEDQRLEIFREFRQGNNGAG
                     RERGTGLGLAIVQRLSLLLNHPLDVRSKTGRGSNFSVEVPLADEDMPGFADDEADEDM
                     RDVGGATVLVVDDDRDIQDGLGMLLHQWGCRPIITASGEEALAAMDDQHAVPDVILAD
                     VHLHEHGSGLTAIQQIRARAGHDVAAFLFTGDTEYPTEVGDHVRVLRKPLDPLRLRTM
                     LADALGR"
BASE COUNT          407 a          835 c          722 g          369 t
ORIGIN      
        1 gtcgatcagt tcaagcagaa ccggaacccg gatatccgcc gccgtggtcc cgagtggcgg
       61 caagcctttc ctggagtgct gtctgtctcg cagcattggc ccctcctgac cgtttcccaa
      121 cagcatccca atcggctgga caatatgact tttctaaaac aaatgttcat ttcgtcgccc
      181 cctatatata tgccgaacat catggctgaa agctcgccat cgggggtacc accacagacc
      241 tctcggctaa gcacggcgca tgaatacatt cgggtggcgc cttcatcgaa tgggcggatt
      301 gcccatccac tcggcacgat tgatcgatca cccatattcg tccaagactc gccatcgagg
      361 tcggctatgc tgtcggcgcc atcgctgctc ggttcggggt atgatcggta cacgaaagaa
      421 cgacgacgac gggacacgtt gcgccatgct gccgcagggg ctttcctgcg cgctggattt
      481 cgcgcccatc ggcatcttcg tcaccgaccc caacaagccc ggcaacccca tcgccttcgt
      541 caaccaggaa ttcgagcgga tcaccggcta cggccgtcac gaggctagcg ggcatggcct
      601 tgacctgctt aacaccgatc tgccgtcacg ggtcgccgca tcggccacca gccgcgaaac
      661 catcaccgac accctggtca accaccgcaa gagcggcgaa cccttcttca tgaagatcga
      721 ggtgcgcccg gtgttcgacg ccgacgaccg gctcgaggcg ttcgtcggcg gcgtcatgga
      781 catgaccgac cagcatctcg cccaggaggc cctggccgaa agcgaggagc ggctgcgcgc
      841 ggtgatgatc gccatcccgc tgcccatgct gaccctgcgc ctggacggca ggatcgcgcg
      901 cgccaacacc gccgcccacg agaccctgcg ggttccgccc aactcgctgc cggggcggtc
      961 ggtcttcgac ttcatcgacc aggacactcc cgcgcgggct ggcgcgctgg atgaactgga
     1021 ccgggccggc ttcgtcgcca aggtcgagat gcaggcgacc cgggccgacg gcgggcaatt
     1081 gtggacgctg gtgtcggcca agcgttacac cgtgcgcggc gagacccgca ccctggtggt
     1141 gttccaggac gtcaccgaac tgaagctgaa ggagcgcgcg ctcaccgaag ccaacgagga
     1201 agccgagcgc aacatccgcg cccgcatgcg ctttttggcc gccgccagcc acgacctgcg
     1261 ccagccgctg caggccatgg cgctgttcgc ctcggccctg gagcaccacg tggcgacgcc
     1321 ccagggccgc accatcgtga cctcgctcaa gaccagcctg cgcggcatgg aggagatgtt
     1381 cgactcgctg ctcgacatgt ccaagctgga tgccggggtg atgaaggcgg agaccagcgt
     1441 gttcctggtc aacgacatca tcgagcagat cgagatgacc tatgccggcc aggccgaggc
     1501 ggccgggctg gaattccgcg tggtgccgtc cagcgccgtg gtgcgcagcg accgccgcct
     1561 gctggcccgc atcatcggca atttcgtgtc caacgccatc cgctacaccc gcaagggccg
     1621 cgtgctgctg ggcgtgcgcc accgcggcga ccgcatccgg gtgtgcgtga tcgacaccgg
     1681 ccccggcatt cccgaggacc agcgcctgga aatcttccgt gaattccgcc agggcaacaa
     1741 cggcgccggc cgcgagcgcg gcaccggcct gggcctggcg atcgtgcagc gcctgtcgct
     1801 gctgctgaac catcctttgg atgtgcgctc gaagaccggg cgcggctcga acttctcggt
     1861 ggaggtgccg ctggccgacg aggacatgcc gggcttcgcc gacgacgagg ccgacgagga
     1921 catgcgcgac gtcggcggcg ccaccgtgct ggtggtcgac gacgaccgcg acatccagga
     1981 cggcctgggc atgctgctgc accaatgggg ctgccggccg atcatcaccg catccggcga
     2041 ggaggccctg gccgccatgg acgaccagca cgccgtcccc gacgtgatat tggccgacgt
     2101 ccacctgcac gaacacggct cgggcctgac cgccatccag caaatccgcg cccgcgccgg
     2161 ccacgacgtc gccgccttcc tgttcaccgg cgacaccgaa taccccaccg aggtcggcga
     2221 ccacgtccgc gtcctgcgca agccgctcga ccccctgcgg ctgcgcacca tgcttgccga
     2281 cgcgctaggg cgctagcgcg tcccgcaccc tgtccaactc gccgccgtcc ttc
//
LOCUS       DATIKR010000715         1546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191884, whole genome shotgun sequence.
ACCESSION   DATIKR010000715 DATIKR010000000
VERSION     DATIKR010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191884"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VLL76_11335"
     CDS             <1..260
                     /locus_tag="VLL76_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV30146.1"
                     /translation="QAAQDIRRTDADQVAIIGHADRAGSDEYNRRLSAERAETVRDVL
                     VSQGIPADRIQLEARGEADPLVPTPDNVRQPQNRRTVIDFD"
     gene            384..776
                     /gene="apaG"
                     /locus_tag="VLL76_11340"
     CDS             384..776
                     /gene="apaG"
                     /locus_tag="VLL76_11340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HSV30147.1"
                     /translation="MYTETTRGITVTVNPVYLDDQSSPADGHYVWAYRVVIENHGEKT
                     VQLRRRRWVITDAMGRVQEVQGAGVVGEQPVLEPGQSFEYTSGTPLPTPSGIMAGSYQ
                     MEAEGGEKFDVTIPAFSLDSPHETLRLN"
     gene            879..1517
                     /gene="folE"
                     /locus_tag="VLL76_11345"
     CDS             879..1517
                     /gene="folE"
                     /locus_tag="VLL76_11345"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HSV30148.1"
                     /translation="MKTDDLTLPKELTEIGRPSRAEAEAAVRTLIRWAGDDPDREGLV
                     GTPDRVVRSYEEFFAGYTQDPVEILQRMFEETDGYDEMVVLRDIRLESHCEHHMVPII
                     GKAHVAYLPDKRVVGISKLARVIEVFAKRLQIQEKLTAQIANAINEVLQPKGVAVVIE
                     AAHQCMTTRGIHKPGVTMVTSRMLGAFRDNAATRREFMALIQGQQGHGLSNV"
BASE COUNT          283 a          551 c          506 g          206 t
ORIGIN      
        1 cccaggccgc ccaggacatc cgccgcaccg acgccgacca ggtggcgatc atcggccatg
       61 ccgaccgcgc cggcagcgac gaatacaacc gccgcctgtc ggccgagcgc gccgagacgg
      121 tgcgcgacgt gctggtgtcg cagggcatcc cggccgaccg catccagttg gaggcgcgcg
      181 gcgaggccga cccgctggtg cccaccccag acaacgtgcg ccagccgcag aaccgccgca
      241 cggtcatcga tttcgactga gccttgcggg cgggccgcgc gaagggcgag gcgcggcccg
      301 ccgcagtgga caacccggcc agggcgcctc aatatgagag gcatgggata cgtccacttg
      361 cgtgcatgag gacaggggcg ccgatgtaca ccgagaccac gcgcggcatc accgtgacgg
      421 tcaaccccgt ctaccttgat gaccaatcgt cgccggccga cggccattac gtctgggcct
      481 atcgcgtggt gatcgagaac cacggcgaaa agaccgtgca gcttcgccgc cgccgctggg
      541 tcatcaccga cgccatgggg cgggtgcagg aggtccaggg cgctggcgtg gtcggcgaac
      601 agccggtgct ggagcccggc cagtcgttcg aatacaccag cggcacgccg ctgccgacgc
      661 cgtcgggcat catggccggc agctaccaga tggaagccga gggtggcgag aagttcgacg
      721 tcaccatccc cgccttctcg ctggacagcc cgcacgagac gctgcgcctc aactaggacg
      781 cgtttttcgc cggggcgtct tgcaaagcct gcatcccatc gccacatcgg gcaggcgtat
      841 cacttccggg gcatgccccg accggatgag ggatagacgt gaagaccgac gacctgaccc
      901 tgcccaagga attgaccgag atcggccgcc ccagccgcgc cgaggcggaa gccgccgtgc
      961 gcaccctgat ccgctgggcc ggcgacgacc ccgaccgcga agggctggtc ggcacccccg
     1021 accgcgtggt gcggtcctac gaggaattct tcgccggcta cacccaggac ccggtcgaga
     1081 tcctgcagcg catgttcgag gaaaccgacg gctacgacga gatggtcgtg ctgcgcgaca
     1141 tccgcctgga atcccattgc gagcaccaca tggtgccgat catcggcaag gcccacgtcg
     1201 cctatctgcc cgacaagcgc gtcgtcggca tctcgaagct ggcccgcgtc atcgaggtgt
     1261 tcgccaagcg cctgcagatc caggaaaagc tgaccgccca gatcgccaac gccatcaacg
     1321 aggtgctgca gcccaagggc gtcgcggtgg tgatcgaggc cgcccaccaa tgcatgacca
     1381 cccgcggcat ccacaagccg ggcgtcacca tggtcaccag ccgtatgctg ggcgccttcc
     1441 gcgacaacgc cgccacccgg cgcgaattca tggcgctgat ccagggccag cagggccacg
     1501 gcctgtcgaa cgtctgaggc ctaccggcgc agcttcggat gctgcg
//
LOCUS       DATIKR010000716         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_22628, whole genome shotgun sequence.
ACCESSION   DATIKR010000716 DATIKR010000000
VERSION     DATIKR010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22628"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="VLL76_11350"
     CDS             <1..992
                     /locus_tag="VLL76_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HSV30149.1"
                     /translation="FRDPPVIVTSDSAAPARHRTRHRSGARRAAFRLLGGLGHDDVWV
                     KVIDLFLVGLIVLNVASVVLESIETLSIAHGPVFHAFDLASVAVFSVEYLVRLWTAVE
                     IDDPRFRHPLWGRLRWMVTPMAIIDLLAVLPFYLGIFVELDLRAIRVLRVLRVFKLGR
                     YSMAMTVMAAVARQEARAIGAVLFVMMVVLIFTSSLMYLFEHRAQPHVFADIPTSMWW
                     SVVTLTTLGYGDMVPLTPLGRMLGGLTAVLGVGMIALPAGVLASGFSEQMRLRREEYR
                     EAVERALEDGRLTKRERHVLDETRLRLGLSEEEAAQVLEHAVKHPHICRHCGQ"
     gene            1069..>1922
                     /locus_tag="VLL76_11355"
     CDS             1069..>1922
                     /locus_tag="VLL76_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSV30150.1"
                     /translation="MSKQKLSWNQTTWSLMRRLTVEGVAPYRGTLVLAAVCMVVSAAA
                     TAGYALLMDPVVNRVFTERKPEYLWPLAIAVLATFVIKAVAEYGQGVLMSKVGLKVIA
                     DMQKRLFGHLMSLDVAFFHSVPTGKLLTRVVNDTGAMRFAVANAFVGIFKDAPSVVFL
                     IGAMFYQDWLLAALTFFVFPLALLPIIRLGKRMRKVTANTQEQQGLLTTYLEQAIQGI
                     RVVKAYGMEQYEDRKVGGLVDDLNNLSFKAARTRSAASPIMELVGGVAIIIVIVYGGA
                     RVIDGPMTP"
BASE COUNT          274 a          651 c          635 g          362 t
ORIGIN      
        1 cctttcgtga tccaccggtt atcgtgacct ccgacagcgc cgcccctgcc cgtcatcgca
       61 cccgccaccg ctccggcgcc cgccgcgccg ctttccgcct gctgggcggc ctggggcatg
      121 acgacgtttg ggtgaaggtg atcgacctgt tcctggtcgg gctgatcgtg ctcaacgtcg
      181 cctcggtggt gctggaatcc atcgagaccc tgtccatcgc ccacggcccg gtgttccacg
      241 ccttcgacct ggcgtcggtg gcggtgttca gcgtggaata cctggtccgc ctgtggacgg
      301 cggtggagat cgacgatccc cgcttccgcc atccgctgtg gggccggctg cgctggatgg
      361 tcacccccat ggcgatcatc gacctgctgg cggtgctgcc gttctacctg ggcatcttcg
      421 tcgaactgga cctgcgcgcc atccgcgtct tgcgggtgct gcgggtgttc aagctgggcc
      481 gctattccat ggccatgacc gtcatggcgg cggtggcgcg gcaggaggcg cgcgccatcg
      541 gcgccgtgct gttcgtgatg atggtggtgc tgatcttcac ctccagcctg atgtatttgt
      601 tcgagcaccg cgcccagccg cacgtcttcg ccgacatccc gacctcgatg tggtggtcgg
      661 tggtgacgct gacgactttg ggctatggcg acatggtgcc gctgacgccg ctgggccgca
      721 tgctcggcgg cctgaccgcc gtgctgggcg tcggcatgat cgcgctgccc gccggtgtgc
      781 tggcctcggg cttttccgag cagatgcggc tgcgccgcga ggaataccgc gaggcggtgg
      841 aaagggcgct ggaagacggc cgcctgacca agcgcgagcg ccatgtcttg gacgagaccc
      901 gcttgcgcct gggcctgtcc gaggaagaag cggcgcaggt gctggagcac gccgtcaagc
      961 atccgcacat ctgccgccat tgcggccagt gatcaacggc cgggcttcta gccggcccat
     1021 cgccgtgcta tggtccggcc gctcgcaacg gccgtgttgg gcaaaccctt gagcaaacag
     1081 aagctttcct ggaaccagac cacctggtcg ctgatgcggc gactgaccgt ggaaggtgtc
     1141 gcaccctatc ggggcacgct ggtgctggcg gccgtgtgca tggtggtgtc ggccgccgcg
     1201 accgccggct atgccctgct gatggacccg gtggtcaacc gcgtcttcac cgagcgcaag
     1261 ccggaatacc tgtggccgct ggccatcgcc gtgctggcga ctttcgtcat caaggcggtg
     1321 gcggaatacg gccagggcgt gctgatgagc aaggtcggcc tcaaggtcat cgccgacatg
     1381 cagaagcggc tgttcggcca tctgatgagc ctggacgtcg ccttcttcca ttccgtcccc
     1441 accggcaagc tgctgacccg cgtcgtcaac gacaccggcg ccatgcgctt cgccgtcgcc
     1501 aacgccttcg tcggcatctt caaggacgcc cccagcgtgg tgttcctgat cggcgccatg
     1561 ttctatcagg actggctgct ggccgcgctg accttcttcg tcttcccgct ggcgctgctg
     1621 ccgatcatcc ggctgggcaa gcgcatgcgc aaggtgaccg ccaacaccca ggagcagcag
     1681 ggcctgctga ccacctatct ggaacaggcg atccagggca tccgcgtggt caaggcctat
     1741 ggcatggagc aatacgagga ccgcaaggtc ggcggcctgg tcgacgacct caacaacctc
     1801 agcttcaagg cggcccgcac ccgctcggcg gcgtcgccga tcatggagct ggtgggcggc
     1861 gtcgccatca tcatcgtcat cgtctatggc ggcgcccgcg tcatcgacgg ccccatgacg
     1921 cc
//
LOCUS       DATIKR010000717         3172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_95937, whole genome shotgun sequence.
ACCESSION   DATIKR010000717 DATIKR010000000
VERSION     DATIKR010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95937"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..730)
                     /locus_tag="VLL76_11360"
     CDS             complement(26..730)
                     /locus_tag="VLL76_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HSV30151.1"
                     /translation="MTTNILSVIAAMAEVATVTPQGTLTRPKQPVVTISRDYGSGGDV
                     IATRLCQRMNVPLYDEQVLKEVATRMRDDPAIVRMLDEGFGHAKDMWLYRLVSGKDIS
                     PDAYRDTLVKVVMSLGRLGGVIIGRGAHVILQESCALRVRIAGTPEVCARRMADSGHG
                     SYEEQLAHAKEVNHRRGKFVWEMFGSRLSDAGAFDITINTDRMSDFEDVVEMLMHMAE
                     AIHEGRVLSSEAVKVC"
     gene            complement(1059..1958)
                     /locus_tag="VLL76_11365"
     CDS             complement(1059..1958)
                     /locus_tag="VLL76_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015280005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HSV30152.1"
                     /translation="MTDSAAAAAAPFPTARDEAEILPEAQGVTPQTASPAYRLAFEDT
                     DFLLRQDLRPVRLQLELLKPELLQQEQGIRSTIAVFGSARIPDPETAERHLEAAEAEA
                     HANPTDRKAARKLAIARRMAANSRYYDEARRLAQIVTNTCVGEHICDFVVKTGGGPGI
                     MEAANRGATDLGGKSIGLNIVLPMEQSPNPYITPELCFRFHYFAIRKMHFLTRSKALV
                     VFPGGFGTLDELFEALTLIQTGKIEPIPVLLFGREYWERVINIDAMIMEGMISPDDKD
                     LITYVETAEEAWNLIAEFYRLPR"
     gene            2095..2751
                     /locus_tag="VLL76_11370"
     CDS             2095..2751
                     /locus_tag="VLL76_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV30153.1"
                     /translation="MSFHHLGDFGDFALSVVVTSPPWYENSYIVRHRPSGEFVVVDPG
                     GDAPRILEAIDREPGKARAIWLTHGHPDHLGAARALEKALGVATVAHTAEQPVIARSS
                     DLNRAFTGEDQEGPANLEYFDGEPTLTLGDAEVRVVATPGHTPGGVCFDFGAFSLTGD
                     TLFRHGLGRTDLPGGSEDQLYASISRFLATIPDATMLYSGHGPEWTGAEAKRWWKMMA
                     "
     gene            2829..>3172
                     /locus_tag="VLL76_11375"
     CDS             2829..>3172
                     /locus_tag="VLL76_11375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30154.1"
                     /translation="MRFAWTFYAGLTFAGLTLLISAPFMGAVALTIWLLRGELWTALS
                     GESLFAVRNEDGRTAGQMVNVGFHTVMVAVPGEPRPRRLLLRLEVRNPDVFADSRGEG
                     RVRLDAWPLDDAA"
BASE COUNT          500 a         1038 c         1083 g          551 t
ORIGIN      
        1 tgagcgggtc agagcggaaa atgcgctaac agaccttgac cgcctcactc gacagcaccc
       61 ggccctcgtg aatggcctcg gccatgtgca tcagcatctc gaccacgtcc tcgaaatcgg
      121 acatgcggtc ggtgttgatg gtgatgtcga aggcgccggc gtcggacagg cgcgagccga
      181 acatctccca cacgaacttg ccgcggcggt ggttcacctc cttggcgtgg gcgagctgtt
      241 cctcgtacga gccatgtcca gaatccgcca tgcggcgggc gcagacctcc ggcgtgccgg
      301 cgatccggac cctcagcgcg caggactctt gcaggatgac gtgggcgccg cggccgatga
      361 tgacgccgcc cagccggccc aggctcatca ccaccttgac cagggtgtcg cgataggcgt
      421 cggggctgat gtccttgccc gacaccaggc ggtacagcca catgtccttg gcgtggccga
      481 agccctcgtc cagcatgcgc acgatcgcgg gatcgtcccg catgcgggtg gcgacctcct
      541 tgagcacctg ttcgtcgtac agcggcacgt tcatgcgctg gcacaggcgg gtggcgatga
      601 cgtcgccgcc ggagccgtag tcgcgggaga tggtgacgac cggctgtttc ggcctggtca
      661 gggtgccttg cggagtgact gtcgccacct ccgccatcgc ggcgataacg ctgaggatgt
      721 tcgtggtcat ggcgtcctcc cggctggcgg ggttcacgcc ctcattatag cgccgaaagc
      781 agcccaattc gcatgattgt ttcggatgcg caatgctgcg cacagggtgc tggcgcctcg
      841 atttccgatc cctggaaatc ccaaaggaaa ccgaggcgcc gttccccctc ccccccggga
      901 gttggtcgcg gaacgcgtgg gtgcgaagcc aagcccccct agcatcgccg ccgtccccgg
      961 ctgcccacgc gttaccgcac ggcgcggata ttaatcgaaa ggcttatgtg tgcaatcggg
     1021 tgaggacccg actcataaaa agttttgagg cccagtcgtc aacgcggcag gcggtagaat
     1081 tccgcgatca ggttccaggc ttcctcggcc gtctcgacat aggtgatcag gtccttgtcg
     1141 tcggggctga tcatgccctc catgatcatg gcgtcgatgt tgatgacgcg ttcccaatac
     1201 tcgcggccga acagcagcac cgggatcggc tcgatcttgc cggtctggat cagggtcagc
     1261 gcctcgaaca attcgtccag cgtgccgaaa ccgcccggga acaccaccag cgccttggag
     1321 cgcgtcagga agtgcatctt gcggatggcg aaatagtgga agcggaagca cagttccggg
     1381 gtgatgtagg ggttgggcga ctgctccatg ggcagcacga tattcagccc gatggacttg
     1441 ccgcccaggt cggtggcgcc gcgattggcg gcttccatga tcccgggacc gccgccggtc
     1501 ttgaccacga aatcgcagat gtgctcgccg acgcaggtgt tggtgacgat ctgggccagc
     1561 cggcgcgctt cgtcgtaata gcggctgttg gcggccatgc ggcgcgcgat cgccagcttg
     1621 cgggcggcct tgcggtcggt ggggttggcg tgggcctcgg cctcggcggc ctcgaggtgg
     1681 cgctcggcgg tctcgggatc ggggatgcgg gccgagccga acacggcgat ggtcgaacgg
     1741 atgccctgtt cctgctgcag caattcgggc ttcagcaact cgagctgcag gcgcaccggc
     1801 cgcaaatcct gccgcaacag gaaatcggtg tcctcgaacg ccaggcgata ggccggcgag
     1861 gccgtctggg gcgtgacgcc ctgggcctcg ggcaggatct cggcttcgtc tctggcggtg
     1921 gggaaaggcg cggcggcggc ggcggcgctg tcggtcatgg tcgatccagt cagggtacgc
     1981 gatcgtgcca ttgtccacct tgggggttag cgttcggtaa acggggcgcc tggaaagccg
     2041 cgtctccttg ggatataggt tgaacaaccg ccatccggac catgcgagga ccacatgagc
     2101 tttcaccatc tgggggattt cggcgatttt gcgctgtccg tggtggtgac cagcccaccc
     2161 tggtacgaga acagctacat cgtccgccac cgcccctcgg gcgaattcgt ggtggtcgat
     2221 cccggcggcg acgcgccgcg catcctggag gccatcgatc gcgaacccgg caaggccagg
     2281 gccatctggc tgacccacgg ccatcccgac cacctgggcg ccgcccgcgc gctggaaaag
     2341 gcgctgggcg tggcgaccgt ggcccacacc gccgagcagc cggtgatcgc ccgctccagc
     2401 gacctcaacc gcgctttcac cggcgaggac caggaaggcc ccgccaacct ggaatatttc
     2461 gacggcgagc cgacgctgac cctgggcgac gccgaggtgc gcgtggtcgc cacccccggc
     2521 cacaccccgg gcggcgtgtg cttcgatttc ggcgccttca gcctgaccgg cgacaccctg
     2581 ttccgccacg gcctgggccg caccgacctg cccggcggca gcgaggatca gttgtacgcc
     2641 tcgatctcgc gcttcctggc gaccatccca gacgccacca tgctgtacag cgggcacggc
     2701 cccgaatgga cgggcgccga ggccaagcgg tggtggaaga tgatggcgta gttgccctcg
     2761 gcgctcgcgc cgcgtaaggt tccggcgggg gcgggcctgg attttggccc ccggggaccg
     2821 accggaaaat gcgtttcgcc tggacattct atgccggcct gaccttcgcg ggcctgactt
     2881 tgctgatcag cgcgccgttc atgggcgcgg tggccttgac catctggctg ctgcgcggcg
     2941 agttgtggac cgcgttgtcg ggcgaatccc tgttcgccgt gcgcaacgag gacggccgca
     3001 ccgccggcca gatggtcaat gtcggcttcc acacggtcat ggtggcggtg cccggcgaac
     3061 cgcgcccgcg ccgactgctg ctgcgcctgg aagtgcgcaa tcccgatgtg ttcgccgaca
     3121 gccgtggcga gggccgcgtg cggctggacg cctggccgct ggacgacgcc gc
//
LOCUS       DATIKR010000718         2245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_83863, whole genome shotgun sequence.
ACCESSION   DATIKR010000718 DATIKR010000000
VERSION     DATIKR010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83863"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VLL76_11380"
     CDS             <1..735
                     /locus_tag="VLL76_11380"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HSV30155.1"
                     /translation="LDETLALAERLQPLVLDVPRALYEANKAGQNLLFEGAQGTLLDI
                     DHGTYPFVTSSNTVSGNAGTGSGVGPGQVGYVLGICKAYTTRVGSGPFPTELDNDIGH
                     KIGDRGHEFGTVTGRRRRCGWFDATLVRQSVKVNGIDGIALTKLDVLDGFEELKICVG
                     YKYRGETLNHLPSAQAKQAEVEPIYESIEGWTDSTQGARSWKDLPATAVKYIRRIEEL
                     IEAPVALLSTSPEREDTILVHDPFAS"
     gene            819..>2245
                     /locus_tag="VLL76_11385"
     CDS             819..>2245
                     /locus_tag="VLL76_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30156.1"
                     /translation="MADAAAEARTEDAVAKPSGPPGVLRDRFVIRSNKPLPELSTPNA
                     EAFVAEDKRDPNRALFALICRPELPPRVNIMRALKGVGGAGFMQMVEWGAMNWPPVGR
                     QCMTVIYERPAGQRLMTNLRSEVRRIDEYDITRKLIEPLVAAVKEMTQRGVTHRAIRP
                     TNIFIMDPAGERISLGDCVTTPPAFDQALVFETIESGMALPIARGSGTYSDDLYSLGV
                     TILFCLLGRNPVANMDDATLLKNKIQQGSYATLVGDERLPLAMIEVLKGLLCDDPDQR
                     WDIEALDLWLQGRRMSPLQPRMEKRAARAFPFQGAEYFNCRELAQAMSKNWDAAIPPV
                     LEGKLELWLRRAVEDKERAQAVADVVRYALSGANDKRVAADLMLCKVLILLDFTAPIR
                     YKGFNAMPDGFGSALAAITAQREDPRLIVEIILREVPKLWFEARKAYLPDNSLMEGNF
                     RELKAYLGQTGMGFGLERCLYEMNDA"
BASE COUNT          397 a          766 c          735 g          347 t
ORIGIN      
        1 ctggacgaga cgctggcact ggccgagcgt ttgcagccgc tggtgctgga tgtgccgcgc
       61 gcgctgtacg aggccaacaa ggccggacaa aacctgctgt ttgaaggcgc ccagggcacc
      121 ttgctggaca tcgaccacgg cacctatccg ttcgtgacct cgtcgaacac cgtgtcgggc
      181 aacgccggca ccggctcggg cgtcggcccc ggccaggtcg gctatgtgct gggcatctgc
      241 aaggcctaca ccacccgcgt cggctcgggt ccgttcccga ccgagctgga caacgacatc
      301 ggccacaaga tcggcgatcg cggccacgag ttcggcaccg tcaccggccg ccgccgccgc
      361 tgcggctggt tcgacgcgac gctggtgcgc cagtcggtca aggtcaacgg catcgacggc
      421 atcgcgctga ccaagctgga cgtgctggat ggcttcgagg agctgaagat ctgcgtcggc
      481 tacaagtatc gcggcgagac cctgaaccac ctgccgtcgg cccaggccaa gcaggccgag
      541 gtcgaaccca tctacgagag catcgagggc tggaccgaca gcacccaggg cgcccgctcg
      601 tggaaggacc tgccggccac cgccgtcaag tacatccgcc gcatcgagga gctgatcgag
      661 gcgccggtgg ccctgttgtc caccagcccc gagcgcgaag acaccatcct ggtgcacgat
      721 cccttcgcga gctgacccca aagggtgacg tgccccatcg ggtcggctag aatagccgct
      781 tgatggggcc gcggctccag cgagaaacgg acgcgagaat ggcggacgcc gctgccgagg
      841 caagaaccga ggatgccgta gccaaaccct caggaccacc gggtgtcctc agggatcgct
      901 tcgtcatacg ctcgaacaag ccgctgcccg agctgtccac gcccaacgcc gaggccttcg
      961 tggccgagga caagcgcgac cccaaccgcg ccctgttcgc cctgatctgc cgccctgaac
     1021 tgccgccgcg cgtcaacatc atgcgcgcgc tcaagggcgt gggcggcgcc ggcttcatgc
     1081 agatggtgga gtggggggcc atgaactggc cgccggtcgg ccgccagtgc atgaccgtga
     1141 tttacgagcg cccggcgggc cagcggttga tgaccaacct gcgcagcgaa gtccggcgca
     1201 tcgacgaata cgacatcacc cgcaagctga tcgagccgct ggtcgccgcc gtcaaggaga
     1261 tgacgcagcg cggcgtcacc caccgcgcca tccggccgac caacatcttc atcatggacc
     1321 cggccggcga gcgcatttcc ctgggcgatt gcgtcaccac gccgccggcc ttcgaccagg
     1381 cgctggtgtt cgagaccatc gaatccggca tggccctgcc catcgcgcgc ggcagcggca
     1441 cctattccga cgacctctac tcgctgggcg tcaccatcct gttctgcctg ctgggccgca
     1501 atccggtggc caacatggat gatgcgaccc tgctgaagaa caagatccag caggggtcct
     1561 acgccacctt ggtgggcgac gagcggttgc cgttggccat gatcgaggtg ctgaagggcc
     1621 tgctgtgcga cgatcccgac cagcgctggg acatcgaggc gctggatttg tggctgcagg
     1681 gccgccgcat gtcgccgctg cagccgcgca tggagaagcg ggcggcgcgc gccttcccgt
     1741 tccagggcgc ggaatacttc aattgccgcg aactggccca ggccatgtcc aagaactggg
     1801 acgcggccat cccgccggtg ctggaaggca agctggagct gtggctgcgc cgcgccgtcg
     1861 aggacaagga gcgcgcccag gcggtggccg acgtggtccg ctatgccctg tcgggtgcca
     1921 acgacaagcg cgtcgcggcc gatctgatgt tgtgcaaggt gttgatcctg ttggatttca
     1981 ccgcgcccat ccgctacaag ggcttcaacg ccatgcccga cggcttcggc tcggccctgg
     2041 ccgcgatcac cgcccagcgc gaggaccccc ggctgatcgt cgagatcatc ctgcgcgaag
     2101 tgcccaagct gtggttcgag gcgcgtaagg cctatctgcc cgacaattca ctgatggaag
     2161 gcaacttccg tgaactgaag gcttatctcg gccagaccgg catgggcttc ggcctggaac
     2221 gctgcctgta cgagatgaac gacgc
//
LOCUS       DATIKR010000719         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47706, whole genome shotgun sequence.
ACCESSION   DATIKR010000719 DATIKR010000000
VERSION     DATIKR010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47706"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /locus_tag="VLL76_11390"
     CDS             complement(<1..1033)
                     /locus_tag="VLL76_11390"
                     /inference="COORDINATES: protein motif:HMM:NF015859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE domain-containing protein"
                     /protein_id="HSV30157.1"
                     /translation="MAEGDLRHHLLDGRTMAILLPSLLATLVVWWGVASQGRELQQTR
                     FRATVDEAVAEIVNRIDAYEQVLRAGSALFDASDDVVAGEWRRFVARLEIERRYPGIQ
                     GIGFARRVSPPDVTGHVDRIRATLYPDYRITPPGGRAIYFPIVFLEPLDRRNLRAIGY
                     DMYAEPVRHAAMIRAAEQGRAIMSGKVTLVQEIGDDVQAGTLLYVPVYAHGSDLATVA
                     ARHAALQGFVYAPFRMADLFTAILGSRLDDLCVVVEDEGGGSQAELFANRPCEAGRLG
                     ERRTIDVNGRQWSVAFRATSRFETELGDRFYSYAVLVAGLAVTALLVVATQSLVAERR
                     RREALIQSNL"
     gene            complement(1033..1389)
                     /locus_tag="VLL76_11395"
     CDS             complement(1033..1389)
                     /locus_tag="VLL76_11395"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV30158.1"
                     /translation="MIAIVEDEAAVRLALTMLMETLGYQVVSGEGPDDVLAQLDGNCV
                     PDVILADYRLRGGLTGFQAISRIREQLGRPLPAIMVTGDTSSAWQAEARQSRLPVLQK
                     PVLARRLVAAIEQALA"
     gene            1556..>1774
                     /locus_tag="VLL76_11400"
     CDS             1556..>1774
                     /locus_tag="VLL76_11400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30159.1"
                     /translation="MTKTPLPPLPGNHREAWRRARQAMEADGRRFTRKGRKGAMALAH
                     VIDLACRLDLPRWFRGGVDNARDLRLRHL"
BASE COUNT          302 a          612 c          606 g          254 t
ORIGIN      
        1 cgaggttgga ctggatcagg gcttcacggc ggcggcgttc ggccaccagc gattgggtcg
       61 ccaccaccag cagggccgtc accgccaatc ccgccaccag cacggcgtag gagtagaagc
      121 ggtcgcccaa ctcggtttcg aaccgggaag tggcgcggaa ggcgacgctc cattggcggc
      181 cattcacgtc gatcgtgcgc cgttcgccca ggcggccggc ctcgcacgga cggttggcga
      241 acaattccgc ctgagagccg ccgccttcgt cctcgaccac gacgcacaaa tcgtcgagac
      301 gcgaacccag gatggcggtg aacaggtcgg ccatgcggaa cggcgcatag acgaacccct
      361 gcaacgcggc gtgacgggcg gcgacggtag cgaggtcgct gccatgggcg taaaccggca
      421 cataaagaag cgtgccggcc tgaacgtcgt cgccgatctc ttggaccagc gtgaccttgc
      481 ccgacatgat ggcccggcct tgctcggcgg cccggatcat ggcggcgtga cgcaccggtt
      541 cggcatacat gtcgtagcca atggcgcgaa ggttgcgacg atcgagcggt tcgaggaaga
      601 cgatggggaa atagattgca cggccccccg gcggggtgat ccggtaatcc ggatagaggg
      661 tggcgcggat gcggtccacg tgcccggtga cgtcgggcgg cgagacgcgc ctggcgaagc
      721 cgatgccctg gatgccggga taacggcgct cgatctcgag tcgtgccacg aaccgccgcc
      781 attcccccgc gaccacgtcg tcactggcgt cgaacagggc gctgcccgcc cgcagcacct
      841 gctcgtaggc gtcgatccgg ttgacgatct cggccaccgc ctcgtccacc gtggcacgaa
      901 agcgggtctg ctgcagctcg cgcccctgcg atgccacgcc ccaccacacc accaaggtgg
      961 cgagcaggga aggaagcagg atcgccatgg tgcggccgtc aaggagatgg tggcgcaaat
     1021 cgccttcggc catcaggcca gcgcctgctc gatggccgcc accaggcggc gcgccagcac
     1081 cggcttttgc aggaccggca ggcggctttg gcgcgcctcg gcctgccagg ccgacgaggt
     1141 gtcgccggtc accatgatgg cgggcagcgg acggcccaat tgctcgcgga tgcgggagat
     1201 ggcctggaag ccggtcagcc cgccgcgcag ccggtaatcg gccaggatca cgtcgggcac
     1261 gcaattgccg tcgagctgcg ccagcacgtc gtccggcccc tcgccactga caacctgata
     1321 gcccagcgtc tccatcagca tggtcagcgc caacctgacc gccgcctcgt cctcgacgat
     1381 ggcaatcatg gcgcgccgtg tcggtttctg gaccgctttg agcatccccc gggccgaaag
     1441 tgaaggttgg ctgcttgcta agtggtcacc gcccccgcca atggaaagcc cgtatgcccg
     1501 gcgcaatggg ggatgcccct tgggggcctc ggctcgagcc accaaatggc gcagcgtgac
     1561 caagacgccc cttccccccc tgcccggcaa tcatcgcgaa gcgtggcggc gtgcgcgcca
     1621 ggccatggaa gccgacggcc gacggttcac ccggaagggg cgcaagggcg ccatggccct
     1681 ggcccacgtc atcgacctgg cctgccggct ggacctgccc cggtggttcc ggggcggggt
     1741 ggacaacgcc cgcgaccttc gcctgcggca cctg
//
LOCUS       DATIKR010000720         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_58688, whole genome shotgun sequence.
ACCESSION   DATIKR010000720 DATIKR010000000
VERSION     DATIKR010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58688"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1111
                     /gene="nusA"
                     /locus_tag="VLL76_11405"
     CDS             <1..1111
                     /gene="nusA"
                     /locus_tag="VLL76_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HSV30160.1"
                     /translation="EYKDRVGEISNGLVKRVEFGNVIIDLGRAEALLRRDELIPRETF
                     RTGDRVRAYIYDVRQEPRGPQIFLSRNHPVFMAKLFAQEVPEIYDGIIEIKAVARDPG
                     SRAKIAVLSHDSSIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWSGEPATFVVNALA
                     PAEVSKVVLDDDTHTMEVVVPDDQLSLAIGRRGQNVRLASQLTGWSIDIMTEAEESER
                     RNEEFRSRSKMFIDALDVDDVIAHLLVTEGFSSVEEVAFVPLEDLAGIEGFDEDVAGE
                     LQQRAQTFLSEQDERYDAMRRDLGVADELAAIDGLAPVMLVKLGDKGVKTLDDLGDLA
                     SDELIDIVGKDQMTEDQANAVIMAARAHWFEGDNA"
     gene            1087..1722
                     /locus_tag="VLL76_11410"
     CDS             1087..1722
                     /locus_tag="VLL76_11410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HSV30161.1"
                     /translation="MVRGRQRLIPADEPLDDEEKGPERRCIVTGETRPKESLLRFAVG
                     PADEVVPDVDRRLPGRGIWLSPRRDVVNTALAKRLFARAARRAVSAPPDLADRIEAML
                     ARRCLDALGLARRAGQAICGYEKVRAEIDGGRVALLMQARDASEAGKDKIRGPAAGLP
                     LIELFDGSELGAVFGRDIAVHVAVAEGKLARRLLEEARLLAGFREGTVTAG"
     gene            1798..>2200
                     /locus_tag="VLL76_11415"
     CDS             1798..>2200
                     /locus_tag="VLL76_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 associated
                     domain-containing protein"
                     /protein_id="HSV30162.1"
                     /translation="MTDSKDQDRKMQLKLAQPGKLELKKTVETGQVRQSFSHGRSKVV
                     TVEKKQTRRFTAAGGSMHEVREGARGGAEAELAMAMAKVEAAKNAASVHDLTSHEKEA
                     RARALEVAMKAEEDARRRAEEEAARRAEEDAL"
BASE COUNT          381 a          734 c          778 g          307 t
ORIGIN      
        1 cgaatacaag gaccgcgtcg gcgagatctc gaacggcctg gtcaagcgcg tcgagttcgg
       61 caacgtcatc atcgacctgg gccgtgccga ggcgctgctg cgccgcgacg agctgatccc
      121 gcgcgagacc ttccgcaccg gcgaccgcgt ccgcgcctac atctacgacg tccggcaaga
      181 gccgcgcggc ccgcagatct tcctgtcgcg taaccatccg gtgttcatgg cgaagctgtt
      241 cgcccaggaa gtgcccgaga tctacgacgg catcatcgag atcaaggcgg tcgcccgcga
      301 ccccggctcg cgtgccaaga tcgccgtgct gagccacgat tcgtccatcg acccggtcgg
      361 cgcctgcgtc ggcatgcgcg gttcgcgcgt ccaggcggtg gtggccgagc tgcagggcga
      421 gaagatcgac atcattccgt ggtcgggcga gcccgccacc ttcgtggtca acgccctggc
      481 cccggccgag gtgtccaagg tggtgctgga cgacgacacc cacaccatgg aagtggtggt
      541 gcccgacgac cagttgtcgc tggccatcgg ccgtcgcggc cagaacgtgc gcctggcctc
      601 gcaactcacc ggctggtcca tcgacatcat gaccgaggcc gaggaatccg agcgccgcaa
      661 cgaggaattc cgctcgcgct cgaaaatgtt catcgacgcc ctggacgttg acgacgtgat
      721 tgcccatctg ctcgtgaccg agggcttctc gtccgtcgag gaagtggcgt tcgtcccgct
      781 cgaggatctt gccggcatcg aagggttcga cgaggacgtg gcgggcgagc tgcagcagcg
      841 cgcccagacg ttcctgtccg agcaggacga gcgttacgac gccatgcgcc gcgacctggg
      901 cgtcgccgac gagctggccg ccatcgacgg cctggcgccg gtgatgctgg tcaagctggg
      961 cgacaagggc gtgaagacgc tggacgacct gggcgacctc gccagcgacg agctgatcga
     1021 catcgtcggc aaggaccaga tgaccgagga ccaggccaac gccgtgatca tggcggcgcg
     1081 cgctcattgg ttcgagggag acaacgcctg atccccgccg acgaaccgct cgacgacgag
     1141 gaaaaggggc cggagcgccg gtgcatcgtc accggcgaga cccggccgaa ggaatcgctg
     1201 ctgcgattcg cggtgggccc cgccgacgag gtggtgcccg acgtggaccg gcggctgccg
     1261 ggccggggaa tctggttgag cccccgccgg gatgtggtaa atacggccct tgcgaaacgc
     1321 ttgttcgcca gggccgcgcg ccgcgcggtg agcgcgccgc ccgatctggc tgaccggatc
     1381 gaggccatgc tcgcccgccg ttgcctcgat gccctgggct tggcgcgtcg cgccggccag
     1441 gcgatctgcg gctacgagaa ggtgcgcgcc gaaatcgacg gcggacgggt ggccctgctg
     1501 atgcaggctc gcgacgcgtc cgaagccggt aaggacaaga tccgtggccc cgctgccggg
     1561 ctgccgctga tcgaactgtt cgacgggtcg gaactgggtg ccgtgttcgg ccgcgacatc
     1621 gcggtccacg tggcggttgc cgaaggcaag ctggcccgcc gtctgttgga ggaggcccgc
     1681 ctgctggccg gtttccgcga gggcaccgtg accgccgggt gagccggcag ccagggtttt
     1741 tgatgggcgg attgaccgcc gtggccgcga agacgcgaaa gagacgaagc cgattacatg
     1801 accgattcca aggatcaaga tcgcaagatg cagctcaagc tggcccaacc cggcaagctg
     1861 gagctgaaga agaccgtcga gaccggccag gtccgccaga gcttctcgca cggccgctcc
     1921 aaggtggtga ccgtcgagaa gaagcagacg cgccgcttca cggccgccgg cggctccatg
     1981 cacgaggtgc gcgaaggcgc ccgcggcggg gccgaggccg agttggccat ggccatggcc
     2041 aaggtcgaag ccgccaagaa cgccgccagc gtccacgacc tcaccagcca tgagaaggaa
     2101 gcccgggccc gcgcgctcga ggtcgccatg aaggccgagg aagacgcccg ccgccgcgcc
     2161 gaggaagagg ccgcgcgccg cgccgaggaa gacgccctcg
//
LOCUS       DATIKR010000721         1964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_168153, whole genome shotgun sequence.
ACCESSION   DATIKR010000721 DATIKR010000000
VERSION     DATIKR010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168153"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="VLL76_11420"
     CDS             <1..305
                     /locus_tag="VLL76_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSV30163.1"
                     /translation="ELIDVLKHAACVVTNDTGPGHLALGVGAPTVLFAGGGHYGTFVP
                     YPEQIRPAKAVFLSREMDCYHCLWRCPKRASRDDAFPCVADITVGEAWDAVRGILG"
     gene            complement(684..1217)
                     /gene="ppa"
                     /locus_tag="VLL76_11425"
     CDS             complement(684..1217)
                     /gene="ppa"
                     /locus_tag="VLL76_11425"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HSV30164.1"
                     /translation="MDIKKIPIGKNPPSDINVIIEIPLRSDPVKYEVCKESGAMFVDR
                     FLHTAMYYPVNYGFVPHTLSDDGDPVDVMVVGRVPVAVGAVLRSRPIGVLLMEDEGGQ
                     DEKILAVPHTKLHPFYDEVNSYEDMPKILLQQIEHFFTHYKDLEEGKWVKCTGWAGRE
                     RAEELIQEAIKRAEAKK"
     gene            complement(1242..>1964)
                     /locus_tag="VLL76_11430"
     CDS             complement(1242..>1964)
                     /locus_tag="VLL76_11430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSV30165.1"
                     /translation="PMSEVAGRMSIQVGAHCLEKEQGGAGVLLGGVPGVPPGKVTIVG
                     GGVVGTNAARMAVGLGARVVILDRSLPRLAQLDEMFAGRVQTAFATMDAIEKHVTEAD
                     LAVGAVLVPGAAAPKLVNRTLVGAMRRGSVVVDVAIDQGGCFATSRPTSHAEPTYVDE
                     GVVHYCVTNMPGAVARTSAFALNNATLPFALALADKGWARALAEDPHLRAGLNIHRGT
                     VTHAAVAHDLGYDYVAAEAVIP"
BASE COUNT          327 a          638 c          644 g          355 t
ORIGIN      
        1 ccgaactgat cgacgtgttg aagcacgcgg cctgcgtggt gaccaacgac accggccccg
       61 gccacctggc cctgggcgtc ggcgccccca ccgtgctgtt cgccggcggc ggccattacg
      121 gcaccttcgt gccctatccc gagcagattc gcccggccaa ggcggtgttc ctgagccgcg
      181 agatggactg ctatcactgc ctgtggcgct gccccaagcg cgccagccgc gacgacgcct
      241 tcccctgcgt cgccgacatc acggtgggcg aggcgtggga cgcggtgcgg gggattttgg
      301 ggtagataaa gagggtgtct gtgtccatcc gtcacgctgt ttgccgatgc gggtggataa
      361 gcggacacaa gaattcacca cagagacaca gaggcacaga gatgttgtgc ggagggatgc
      421 attgttcctc ccatccacgc catggaaact catgaggctt ggaaacaggg cggaagcgtt
      481 ctggacggtc tctctgtgcc tctgtgtctc tgtggtaaac ctcctattca ccacgcgatg
      541 agtgcctgaa ggctggcctg atcctaagcc ggacagcacg ggcatgacgg aaggacacag
      601 acggctttcc ccgctaatcc gcgatgcacc aataaaaaac ccctccacct tgcgatggag
      661 gggttttgat gcagggtcga agcttacttc ttggcttcgg cgcgcttgat cgcttcctgg
      721 atcagctcct cggcgcgctc gcggccggcc cagccggtgc acttgaccca cttgccctct
      781 tcgaggtcct tgtagtgggt gaagaagtgc tcgatctgct gcagcaggat cttcggcatg
      841 tcctcgtacg aattcacttc gtcgtagaac gggtgcagct tggtgtgggg caccgcgagg
      901 atcttctcgt cctggccgcc ctcgtcttcc atcagcagca cgccgatcgg gcgcgagcgc
      961 agcacggcgc ccacggccac cggcacgcgg ccgaccacca tcacgtcgac cgggtcgccg
     1021 tcgtcggaca gggtgtgcgg cacgaagccg taattcaccg ggtagtacat ggcggtgtgc
     1081 aggaaacggt cgacgaacat agcccccgat tccttgcaga cctcgtactt caccggatcg
     1141 ctgcgcagcg ggatctcgat gatgacgttg atgtcgctgg gggggttctt accgattggg
     1201 atcttcttga tgtccatagc tgcctgggtc cttggatctt tttatggaat aacggcctcg
     1261 gccgcgacgt agtcgtagcc cagatcgtgc gccaccgcgg cgtgggtgac tgtgccgcgg
     1321 tgaatgttga ggcccgcccg aaggtggggg tcctcggcca atgcgcgagc ccagccctta
     1381 tcggccaagg cgagcgcaaa tggaagcgtc gcgttgttca atgcgaaggc cgaggtgcgc
     1441 gcgacggcac ccggcatgtt ggtgacgcag taatgcacca ccccctcgtc cacgtaggtc
     1501 ggctcggcgt gggaggtggg gcgcgaggtg gcgaagcagc cgccctggtc gatggcgacg
     1561 tccaccacca ccgaaccgcg ccgcatggcg cccaccaggg tgcggttgac cagcttgggc
     1621 gcggcggcgc ccggcaccag cacggcgccc accgccaaat cggcctcggt gacgtgcttc
     1681 tcgatggcgt ccatggtggc gaaggcggtc tgcaccctcc ctgcgaacat ctcgtccaat
     1741 tgggccaggc gcggcagcga gcggtcgagg atgaccacgc gggcgcccag gccgaccgcc
     1801 atgcgcgcgg cgttggtgcc gaccacgccg ccgccgacga tggtgacctt gcccggcggc
     1861 acccccggca cgccgcccag cagcacgccg gcaccgccct gttccttttc caggcaatgg
     1921 gcgccgacct ggatcgacat tcggccggcg acctcgctca tggg
//
LOCUS       DATIKR010000722         1882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_191956, whole genome shotgun sequence.
ACCESSION   DATIKR010000722 DATIKR010000000
VERSION     DATIKR010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191956"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VLL76_11435"
     CDS             complement(<1..507)
                     /locus_tag="VLL76_11435"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HSV30166.1"
                     /translation="MRRMSSSDIVVTADDRIASSAPASPRRTRGAARDAEPKAAKTKA
                     KRKIARPRFDLTPLQKLAAGGVAVTALLVGSAVIWHSGIIQRTAHNTVASILDATARA
                     GFAVADITVSGRTRTPTAQIVAALGAKHGDPILGVDISVVKDRLEAIDSVRAAAVERR
                     LPGSIHIAI"
     gene            complement(495..1415)
                     /locus_tag="VLL76_11440"
     CDS             complement(495..1415)
                     /locus_tag="VLL76_11440"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HSV30167.1"
                     /translation="MTKRVTVLMGGASAEREVSLRSGAAAAKALTEAGFAVAPVEVSR
                     DPAAMVRDILASNPDVVFNALHGRFGEDGCVQGMLNLLGIPYTHSGLLASAAAMDKGF
                     ARGMFQSAGIPVPEGRVIRKGEVEGDPMRRPYVVKPLNEGSSFGVYIIKAGDNRDPVK
                     TWPFEGNEVLVEQFVPGRELTVAVMGDRALGCLEITSDRGFYDYDAKYAPGGSRHIMP
                     APLPKDYYDEACRLALLAHKVLGCRGVSRTDLRYDDTRPGCSPKLYVLEVNTQPGMTA
                     TSLVPEIAAHAGIGFPELVRWMVENAACDA"
     gene            complement(1412..>1882)
                     /locus_tag="VLL76_11445"
     CDS             complement(1412..>1882)
                     /locus_tag="VLL76_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
                     /protein_id="HSV30168.1"
                     /translation="SAEAVDRSGTRHTLSLDQLGFGYRHCGVPEGWIFTGCVMQGRDG
                     DKQAIADRMAEIRTARETTQPTRVRTGGSTFANPPGGKAWELIDKAGCRGLTIGGAQV
                     SEKHCNFLLNTGHATAADIEALGEEVRRRVLETSGVELHWEIRRIGVPAMGEKA"
BASE COUNT          260 a          616 c          717 g          289 t
ORIGIN      
        1 gatggcgatg tggatcgagc cgggcaggcg gcgctcgacg gcggcggccc tgaccgaatc
       61 gatggcctca aggcggtcct tcaccaccga gatgtccacg cccaggatgg ggtcgccgtg
      121 cttggcgccc agggcggcga cgatctgggc ggtcggcgtg cgggtgcggc ccgagacggt
      181 gatgtcggcg acggcgaagc cggcccgcgc ggtggcgtcc aggatgctgg cgacggtgtt
      241 gtgggcggtg cgctggatga ttccggaatg ccagatgacg gccgagccga ccagcagcgc
      301 ggtcaccgcc acgccgcccg ccgccagctt ctgcagcggg gtcaggtcga agcgcggccg
      361 cgcgatcttg cgcttggcct tggtcttggc ggccttcggc tcggcatcgc gggcggcgcc
      421 acgggtccgg cggggcgagg ccggggcgct gctggcgatg cggtcgtcgg cggtgacgac
      481 gatgtcgctc gaactcatgc gtcgcatgcg gcgttctcca ccatccaacg gaccagttcg
      541 gggaagccga tgccggcatg ggcggcgatc tcgggaacca gcgaggtcgc ggtcatgccc
      601 ggctgggtgt tgacttccag cacatagagc ttgggcgagc agcccgggcg ggtgtcgtcg
      661 tagcgcaggt cggtgcggct gacgccccgg cagcccagca ccttgtgggc cagcagggcc
      721 aggcggcagg cctcgtcgta gtaatccttg ggcagcggcg ccggcatgat gtggcgcgag
      781 ccgccggggg catacttggc gtcgtagtcg tagaagccgc gatccgaggt gatctccagg
      841 cagcccaggg cgcggtcgcc catcacggcc acggtcaatt cgcggccggg gacgaattgc
      901 tcgaccagga cctcgttgcc ctcgaaaggc caggtcttga ccgggtcgcg attgtcgccc
      961 gccttgatga tgtagacgcc gaaggacgag ccttcgttga gcggcttgac cacgtagggg
     1021 cggcgcatgg ggtcgccctc gacctcgccc ttgcggatga cgcggccctc gggcaccggg
     1081 atgccggccg actggaacat gccgcgggcg aagcccttgt ccatggcggc ggccgaggcc
     1141 agcaggccgg aatgggtgta gggaatgccc agcaggttca gcatgccctg gacgcagccg
     1201 tcctcgccga agcggccgtg cagggcgttg aacacgacgt cggggttgct ggccaggatg
     1261 tcgcggacca tagcggcggg gtcgcgcgac acctcgaccg gggcgacggc gaagccggcc
     1321 tcggtgagcg ccttggcggc ggcggcaccc gagcgcaacg acacctcgcg ctcggccgag
     1381 gcgccaccca tcaggaccgt cacgcgcttc gtcatgcctt ttctcccatg gccggaacgc
     1441 cgatccggcg gatttcccaa tgcagctcga cgcccgaggt ttccagcacg cggcggcgca
     1501 cttcctcgcc cagggcttcg atgtcggcgg ccgtggcgtg gccggtgttg agcaggaaat
     1561 tgcagtgctt ctcgctgacc tgtgcgccgc cgatggtcag gccacggcag ccggccttgt
     1621 cgatcagctc ccacgccttg ccgccgggcg ggttggcgaa ggtcgagccg ccggtgcgga
     1681 cgcgggtcgg ctgggtggtc tcgcgggcgg tgcggatctc ggccatgcgg tcggcgatgg
     1741 cctgcttgtc gccgtcgcgg ccctgcatga cgcagccggt aaagatccag ccctcgggca
     1801 cgccgcaatg gcggtagccg aaacccaact ggtcgagcga cagcgtgtgg cgggtgccgc
     1861 tgcggtccac cgcctcggcc ga
//
LOCUS       DATIKR010000723         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_131689, whole genome shotgun sequence.
ACCESSION   DATIKR010000723 DATIKR010000000
VERSION     DATIKR010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131689"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VLL76_11450"
     CDS             complement(<1..657)
                     /locus_tag="VLL76_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020559182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HSV30169.1"
                     /translation="MSAQCEVAAKHAAKAPMGVFERFLTLWVGLCIVAGVALGHLFPA
                     PFQAIGGMEVAQVNLPVAVLIWLMIIPMLLKIDFGALHQVREHWRGIGVTLFINWAVK
                     PFSMALLGWLFIGTVFRPWLPADQIDSYIAGLILLAAAPCTAMVFVWSNLCDGEPHFT
                     LSQVAVNDVIMVVAFAPIVGLLLGLSSITVPWDTLLTSVVLYIVIPVILAQLWRKALL
                     A"
     gene            complement(657..1115)
                     /locus_tag="VLL76_11455"
     CDS             complement(657..1115)
                     /locus_tag="VLL76_11455"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HSV30170.1"
                     /translation="MSDKICNVLVLCTGNSARSVLAECLINDLGGGKWKAFSAGSKPT
                     GKVNPLSIEILKEKGHSVEGLRSKSWDEFAQPGAPRMDLVITVCDNAAGEVCPVWPGH
                     PSKLHVGFPDPAAAEGSHEQRLAVFREVYGMIEAKVRKLIALGPERAGEV"
     gene            complement(1112..1480)
                     /locus_tag="VLL76_11460"
     CDS             complement(1112..1480)
                     /locus_tag="VLL76_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV30171.1"
                     /translation="MLETFEIVGKAVADRNRVRILKLLEGGEVCVCQVTAVLDLAPAT
                     VSKHLSVLRTAGLVQQRRDGKWVYYRLAEGRLNAYAAQFLALVAASLADDPSTAEDRR
                     VLAMLDADDQATTLCHGEAT"
BASE COUNT          417 a          699 c          711 g          332 t
ORIGIN      
        1 ggccagcagc gccttgcgcc agagctgcgc caggatcacc ggaatcacga tgtacagcac
       61 gaccgaggtc agcagcgtgt cccacggcac ggtgatggac gacagcccca gcagcaggcc
      121 gacgatgggg gcgaaggcca ccaccatgat gacgtcgttg acggccacct ggctcagggt
      181 gaaatgcggc tcgccatcgc acaggttcga ccacacgaac accatggcgg tgcagggggc
      241 ggcggccagc aggatcaggc cggcgatgta gctgtcgatc tggtcggcgg gcagccacgg
      301 gcggaacacc gtgccgatga acagccagcc cagcagggcc atcgagaacg gcttgaccgc
      361 ccagttgatg aacagggtga cgccgatgcc gcgccaatgc tccctgacct ggtgcagggc
      421 gccgaagtcg atcttcagca gcatggggat gatcatcagc cagatcagca ccgccaccgg
      481 caaattgacc tgggcgacct ccatgccgcc gatggcctgg aagggggcag ggaacagatg
      541 gcccagcgcc accccggcga cgatgcacag cccgacccac agggtcagga aacgttcgaa
      601 cacgcccatg ggcgccttgg cggcgtgctt ggccgcgacc tcgcattgtg ccgacatcaa
      661 acctctccgg cgcgctcggg gcccagcgcg atcagcttgc ggaccttggc ctcgatcatg
      721 ccgtagacct cgcggaacac agccaggcgc tgctcgtggc tgccctcggc ggcggcaggg
      781 tcgggaaagc cgacatggag cttggacgga tggccgggcc acaccgggca gacctcgccg
      841 gcggcgttgt cgcagacggt gatgaccagg tccatcctgg gcgcgccggg ctgggcgaac
      901 tcgtcccacg acttcgaccg caggccctcg accgaatggc ccttctcctt gaggatctcg
      961 atggacagcg ggttgacctt gccggtcggc ttgctgccgg cgctgaacgc cttccacttg
     1021 ccgccgccca ggtcgttgat caggcattcg gccagcacgc tgcgcgccga attgccggtg
     1081 cacagcacca gcacgttgca aatcttatcg ctcacgtcgc ttccccatgg cacaaggttg
     1141 tcgcctgatc gtcggcatcg agcatcgcca gcacgcggcg gtcctcggcc gtggagggat
     1201 cgtcggccag cgaggccgcg accagggcca ggaattgcgc cgcataggcg ttcaggcgcc
     1261 cctcggccag ccggtaatac acccacttgc cgtcacgccg ctgctgcacc agcccggccg
     1321 tcctcagcac cgacaggtgc ttggaaacgg tggccggcgc cagatccagc acggccgtca
     1381 cctggcagac gcacacctcg ccgccttcca gcaacttcag gatccgcacc cggttgcggt
     1441 cggcgacggc cttgccgacg atctcgaatg tctcaagcat ggggggggag gataatgaca
     1501 tttcggcaat tggcgaaatg aaacttcgat gaccgaccgc cgggacggcc ccgcttgggg
     1561 ccgcccggcg gcgggctcag gcgctgcaac gccgctacat ggccccagaa agtctcgccg
     1621 ccgtgagcga tgatcgaaac aagctacctg caatcgcagt cgcctaaacc ggcggcctgc
     1681 ccgccgaaga tacagaaaaa aagccccagc acgaggctgg ggctcaagtt tagggaggaa
     1741 acgtccaaga aaggcaacaa gggagggtcc gaggaccgtt ccgtttgctg cagtgcaata
     1801 tatacggccc gcgatgctgc gatgcaagag aaaaactgag ccttggtgat accggttttc
     1861 cgtaataggc agaaatcgct catcattttg ggtatgcaaa gcagccatga gagggtgccg
     1921 ggtgtcaggc tggtcaaatt ggcatgcgat gtgcaaatat tcgcgtgcac cttttgacga
     1981 ggatggcgcc ccgaatggcg acgcgtggat tggcgatgat ggcggcggtg gttgccctgg
     2041 ccctgggatg ggccggcggc gcgcgtgcca cgctgcccgg ggtgccgccc gagacgctgt
     2101 gcgccgccga gaccaaccgt ttcgagcggc aatacggcat cccgtcgcat ttgctggac
//
LOCUS       DATIKR010000724         3516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_10882, whole genome shotgun sequence.
ACCESSION   DATIKR010000724 DATIKR010000000
VERSION     DATIKR010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3516
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10882"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VLL76_11465"
     CDS             complement(<1..555)
                     /locus_tag="VLL76_11465"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSV30172.1"
                     /translation="MFVLSKIVAALLDPFTLVSLLLALATILLFTRRWQLGRGILAAV
                     VTFCAVAAALPLGDWLIAPLEDRFPPPNAMPAHVDGIIVLGGAIDPGLSAARGQAQLG
                     AAAERVTALVPLAARYPDARLVYTGGSGSVLDQDRKEAPVARQFLSSLGLDPDRVAFE
                     DRSRNTRENALYSREIVQPSPDAVW"
     gene            676..1305
                     /locus_tag="VLL76_11470"
     CDS             676..1305
                     /locus_tag="VLL76_11470"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HSV30173.1"
                     /translation="MDRLIEGFRRWRDTYFEENRQLFESLAQKGQTPKVLLIGCCDSR
                     VDPGLIFGTGPGEMFVLRNVANLIPPYAPDQRHHGTSAAVEYAVRCLEVEHIIVLGHA
                     RCGGVKSLVEGGGTNTDYDFINGWMTIARSARDRAMALTLSSGQPIEAAQRMCEHETV
                     AISLSNLMTFPWIRERVEAGRMMLHGWWFDLDNGELFRLDPVANTFVKV"
     gene            1351..1440
                     /locus_tag="VLL76_11475"
     tRNA            1351..1440
                     /locus_tag="VLL76_11475"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1385..1387,aa:Ser,seq:tga)
     gene            1555..2547
                     /locus_tag="VLL76_11480"
     CDS             1555..2547
                     /locus_tag="VLL76_11480"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV30174.1"
                     /translation="MDWWDVLFLGKEAWVWLVFLGLLVVLLVLDLGMLHRPDPKTGRR
                     REIEVGESLALSAGYIVIGLTFGAWVWHEMGREAGINYLTGFVIEKSLALDNIFVISL
                     IFSYFAVPRAYQHRVLFWGILGVIVLRGIMIGFGAALVHEFAWIMWVFGGFLLITGIK
                     MLVVADKPGLDLSHNPVLAFLRRRLPVTEHIEAEAFFVRRRDAFGRLRTWVTPLFLCL
                     VLIELVDIVFAVDSVPAIFAITTDPYIVYTSNIFAILGLRALYFALAAMMHRFVYLKH
                     ALALILVFIGGKIFWTQLVGKPDPAVSLTVTGLLIAGGIGASLWRTRKVTESGQ"
     gene            2828..>3516
                     /locus_tag="VLL76_11485"
     CDS             2828..>3516
                     /locus_tag="VLL76_11485"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV30175.1"
                     /translation="MKVFRSLFLLMGVATLAACAGHADVEASRPVAVPQPVVAAPQPA
                     PVDPEIANAPRSFTVYFDSNKADIRASAMQIIYEAWQVAGKVKPVTIRIHGYTDAAGN
                     AAHNQKLSERRAQAVADQLAKLGLKVAVEVKGFGESAPAVKGKKSLKQNRRVEITFEG
                     SQVADSGSDRFDRVEAPAPADDQLASAPQGKQPMAPAPALAFAAAAMPAPAAAPAAVV
                     DDGSGAIGIAGL"
BASE COUNT          585 a         1156 c         1123 g          652 t
ORIGIN      
        1 ccacaccgcg tccggtgaag gttgaacgat ttcacggctg tagagggcgt tttcgcgggt
       61 gttgcgcgag cgatcctcga aagccacccg gtccggatcc agccccagcg agctgaggaa
      121 ttgccgcgcc accggcgctt ccttgcggtc ctggtcgagc accgagccgg aaccgccggt
      181 gtagaccagg cgggcgtcgg gatagcgagc ggccaaaggc accagcgccg tcacccgctc
      241 cgccgcagcc cccaattgcg cctggccgcg cgcggcgctg aggccggggt cgatggcgcc
      301 gcccaggacg atgatgccgt ccacatgcgc gggcatggcg ttgggcggcg gaaagcgatc
      361 ctccagcggg gcgatcagcc agtcgcccag gggcagcgcg gcggcgaccg cgcagaacgt
      421 caccaccgcc gccaggatcc cccgtcccag ctgccagcgg cgcgtgaaca gcaggatggt
      481 ggcgagcgcc agcagcagcg agaccagcgt gaaaggatcg agaagggcgg cgacgatctt
      541 ggaaagcacg aacatggact taccttgcca gcgatagggc gggctgtcac cgccccgacg
      601 gggtggtttg cggatgcgcg aaaggaagtt tcgtgctaat caggctccgt cacgaccgag
      661 tcgaaaggga tgggcatgga tcgactgatc gaaggcttcc gccggtggcg cgacacctac
      721 ttcgaggaaa accgccaact ctttgaatcc cttgcacaaa aggggcagac cccgaaggtg
      781 ctgttgatcg gctgctgcga ttcgcgcgtc gatcccggcc tgatcttcgg aaccggcccc
      841 ggcgaaatgt tcgtactcag gaacgtcgcc aacctgatcc cgccctatgc ccccgaccag
      901 cgtcaccacg gcaccagcgc cgccgtcgag tatgccgtgc gctgtctcga ggtcgaacac
      961 atcatcgtgc tgggccacgc ccgctgcggc ggcgtcaagt cgctggtgga aggcggcggc
     1021 accaacaccg attacgactt catcaacggc tggatgacca tcgcccgctc ggcccgcgac
     1081 cgcgccatgg ccctgaccct gtcgtcgggc cagccgatcg aggcggcgca gcgcatgtgc
     1141 gagcacgaaa ccgtggcgat ctcgctgtcg aacctgatga ccttcccgtg gatccgcgaa
     1201 cgggtcgagg ccggccgcat gatgctgcac ggctggtggt tcgacctcga caacggcgaa
     1261 ttgttccgcc tcgacccggt cgccaacacc ttcgtcaagg tctgacctct ggacaacggc
     1321 ccctttcgcg gttagaccat cggtcgccgc ggaagggtgg ccgagtggtt taaggcagcg
     1381 gtcttgaaaa ccgccgtggg ggcaacccca ccgtgggttc gaatcccacc ccttccgcca
     1441 gaaaagcccg gcaacacgtt gttttgccgg gcttttctta ttcgcagcgc cccactttat
     1501 ttccatgcgg ctgcacctag ttccgttgca ctgacaacca cgaaggtggc cgcaatggat
     1561 tggtgggatg tgctctttct gggcaaggaa gcctgggtct ggcttgtctt tcttggcctt
     1621 ttggtcgttc ttctggtgct ggacctgggc atgctgcacc ggcccgatcc caagactggg
     1681 cggcggcgcg agatcgaggt gggtgaaagc ctggcgctga gcgccggcta catcgtcatc
     1741 ggcctgacct tcggcgcctg ggtctggcac gagatggggc gcgaggctgg catcaactac
     1801 ctgaccggct tcgtgatcga aaagagcctg gccctcgaca acatcttcgt catctccctg
     1861 atcttcagct atttcgccgt gccccgcgcc tatcagcacc gggtgctgtt ctggggcatc
     1921 ctgggcgtga tcgtcctgcg cggcatcatg atcggcttcg gcgccgcgct ggtgcatgaa
     1981 ttcgcctgga tcatgtgggt cttcggcggt ttcctgctga ttaccggcat caagatgctg
     2041 gtggtcgccg acaagcccgg gctcgatttg tcccataatc cggtgctggc attcctgcgc
     2101 cgccgtctgc ctgtcaccga acacatcgaa gcagaggcgt ttttcgttcg ccggcgtgat
     2161 gccttcggac ggctgcgcac ctgggtgacg ccactgttct tgtgcctggt gctgatcgaa
     2221 ctggtggaca tcgtgttcgc ggtcgacagc gtgcccgcca tcttcgccat cacgaccgat
     2281 ccgtacattg tctatacgtc gaacatcttc gcgatcctgg gcctgcgtgc gctgtatttc
     2341 gccctggcgg cgatgatgca ccgcttcgtc tatctcaagc acgcgctggc gctgatcctg
     2401 gtgttcatcg gaggcaagat cttctggacg caactggtcg gcaagccgga tccggcggtg
     2461 tcgctgacgg tgacgggcct gttgatcgcc ggcggcatcg gtgcctcgct atggcgcacg
     2521 cgcaaggtca ccgagtccgg ccagtgaagt atggcctgcc cctggccagg atccgcagct
     2581 tggccagggg cgaccgttgc ggttcggtca acgccgcacc cctttcggaa gcgcccctaa
     2641 gtgtctggcg ggggctgatt tttcggcaat tgacacccgc ccgtcactgc gtctgcgcga
     2701 gttaaactga aacattacat taagaatagc cgaggcggcg tcatagagtc cgcgaaataa
     2761 atgctggaca tgcaggagtc tgtacttcat agatctaggg taagtgttac cttatggtct
     2821 accgtcgatg aaggtctttc gttcgctctt cctgctgatg ggtgtcgcca ccctcgccgc
     2881 ctgcgccggc catgccgatg tcgaggcgag ccgtcccgtg gccgtgcccc agccggtggt
     2941 cgcggcgccg cagccggctc cggtcgatcc cgagatcgcg aacgctcccc gttccttcac
     3001 cgtctatttc gattcgaaca aggccgacat ccgcgcctcg gccatgcaga tcatctatga
     3061 ggcgtggcag gtggccggca aggtcaagcc ggtgaccatc cgcatccacg gctatacgga
     3121 tgcggccggc aacgccgccc ataaccagaa gctgtccgag cgccgtgccc aggcggtggc
     3181 cgaccaattg gccaagctcg gcctcaaggt cgccgtcgag gtcaagggct tcggcgagag
     3241 cgccccggcg gtcaagggca agaagtcctt gaagcagaac cgccgcgtcg agatcacctt
     3301 cgagggctcg caggtcgccg attccggcag cgaccgcttc gaccgggtcg aagccccggc
     3361 cccggccgac gaccaactgg cttccgcccc gcagggcaag cagccgatgg cgccggcacc
     3421 cgccctcgcc ttcgccgccg ccgccatgcc cgcgccggcc gccgctccgg ccgctgtcgt
     3481 ggacgacggt tcgggcgcca tcgggattgc cggcct
//
LOCUS       DATIKR010000725         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_240673, whole genome shotgun sequence.
ACCESSION   DATIKR010000725 DATIKR010000000
VERSION     DATIKR010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240673"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VLL76_11490"
     CDS             <1..298
                     /locus_tag="VLL76_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HSV30176.1"
                     /translation="VSVLRTLSRHFQRLHLAAGLMAQGKSVDQAMAALKPPVIFKAAD
                     RFKRQLSRWPADRLGRALELLLEAEAECKTTGMPAAESCSRAVMQLCRAAGRTR"
     gene            383..>2031
                     /locus_tag="VLL76_11495"
     CDS             383..>2031
                     /locus_tag="VLL76_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HSV30177.1"
                     /translation="MSQQVDFLQAGIADDVAALARDRLDPDRARAAAHLARLFAAGIP
                     AAELEGADPHMIYGAVLGLLGFMRARPPAAAKLRVFDPDLEQHGWVSPRTVIEIVNDD
                     MPFLVDSVAIELARRNVAIHRLIHPVLPVRRSADGVLTDLAPPDGPAESLMHLEIDRQ
                     PRDRHGELAEALHAVLGQVRLAVSHWPAMRERIKAVAAETAELDRGDAPEATAFLDWL
                     HDDHFTFLGYRCFDFRDDGELQVAFDMADCLGILTDPDSRVFDPSLQLAAMPAEVRSF
                     IRRPELLLVTKSARVSAIHRPAHMDVIGVKRVGPGGAVIGLHAFLGLFTAAAYTRNPA
                     GIPLLRRKVEGVRERAGFPPFGHDDKALVNILETFPRDELFQISEDALLTTALGILRL
                     QERPRPALFMRRDEFERFVSCLVFLPRDRYDTPLRLAVQRLLEQALGGEVDGYYTQVT
                     DAPLARLHIIVRTIPGAIGKADVRELEQRIAEAARSWSDHLQDALIQAHGEADGLALA
                     QRYGDAFPVAYRERHAVVAAVADVDRIEAVLAGDDIALTLYR"
BASE COUNT          275 a          746 c          701 g          309 t
ORIGIN      
        1 ggtgtcggtg ctgcgcaccc tgtcgcgcca cttccagcgc ctgcatttgg ccgccgggct
       61 gatggcccag ggcaagtcgg tcgaccaggc catggcggca ctgaagccgc cggtgatctt
      121 caaggcggcc gaccgcttca agcgccaatt gtcgcgctgg ccggccgacc gcctgggccg
      181 cgccctcgaa ttgctgctgg aggccgaggc cgagtgcaag accaccggca tgccggcggc
      241 cgaatcgtgt tcgcgcgccg tgatgcagct gtgccgcgcc gccggccgca cgcgctgacg
      301 cgcgcatcgg cacttggacg gttgaaatcc cggcgccatg gcctagccta aagataaggg
      361 cagcgcgagg cgggagccgg tcatgagcca acaggtcgat ttcctgcaag cgggcatcgc
      421 cgacgacgtc gccgccctgg cgcgcgaccg cctcgatccc gaccgtgcac gcgccgccgc
      481 ccacctcgcc cgcctgttcg ccgccggcat cccggcggcc gagttggagg gcgccgaccc
      541 ccacatgatc tatggcgccg tgctgggcct gctcggcttc atgcgggcgc gcccgcccgc
      601 cgccgccaag ctgcgggtgt tcgatcccga cctggagcag cacggctggg tgtcgccgcg
      661 cacggtgatc gagatcgtca acgacgacat gccgttcctg gtggattcgg tcgccatcga
      721 gttggcgcgg cggaacgtcg ccatccaccg gctgatccat cccgtgctgc cggtgcggcg
      781 ctcggccgac ggcgtgctga cggatctggc gccacccgac ggtcccgccg aatcgctgat
      841 gcatctggaa atcgaccgtc agccgcgcga ccgccacggc gaactggccg aggccctgca
      901 cgcggtcctg ggccaggtgc ggctggcggt gagccattgg ccggccatgc gcgagcgcat
      961 caaggcggtg gccgccgaga ccgccgagct ggaccgcggc gacgcgcccg aggcgaccgc
     1021 cttcctggat tggctgcacg acgaccattt caccttcctc ggataccgct gcttcgactt
     1081 ccgcgacgac ggcgagttgc aggtggcctt cgacatggcc gactgcctgg gcatcctgac
     1141 cgacccggac tcgcgggtgt tcgaccctag cctgcaactg gccgccatgc cggccgaggt
     1201 gcggtcgttc atccgtcggc cggaattgct gctggtcacc aagtcggcgc gggtgtcggc
     1261 gatccaccgg cccgcccata tggacgtcat cggggtcaag cgcgtcggcc cggggggcgc
     1321 cgtcatcggg ctgcacgcct tcctgggcct gttcaccgcc gccgcctaca cccgcaaccc
     1381 ggcgggcatc ccgctgctgc ggcgcaaggt ggagggggtg cgcgagcggg ccggcttccc
     1441 gcccttcggc catgacgaca aggcgctggt caacatcctg gagaccttcc cgcgcgacga
     1501 gctgttccag atctccgagg acgccctgct gaccaccgcc ctgggcatcc tgcgtctgca
     1561 ggagcgtccc cgccccgcct tgttcatgcg ccgcgacgag ttcgaacgct tcgtctcgtg
     1621 cctggtgttc ctgccgcgcg accgctacga cacgccgttg cgcctggcgg tgcagcggct
     1681 gctggaacag gcgctgggcg gcgaggtgga cggctattac actcaggtca ccgacgcgcc
     1741 gctggcgcgg ctgcacatca tcgtccgcac cattcccggc gccatcggca aggccgacgt
     1801 gcgcgagctg gagcagcgca tcgccgaggc ggcgcggtcg tggagcgacc atctgcagga
     1861 cgccctgatc caggcgcacg gcgaggccga tggcctggcc ctggcgcaac gctacggcga
     1921 cgcctttccg gtcgcctatc gcgagcgcca cgcggtggtg gccgccgtgg ccgacgtgga
     1981 ccgcatcgag gcggtgctgg ccggcgacga catcgccctc accctctacc g
//
LOCUS       DATIKR010000726         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_144321, whole genome shotgun sequence.
ACCESSION   DATIKR010000726 DATIKR010000000
VERSION     DATIKR010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144321"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..>1715
                     /gene="feoB"
                     /locus_tag="VLL76_11500"
     CDS             84..>1715
                     /gene="feoB"
                     /locus_tag="VLL76_11500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HSV30178.1"
                     /translation="MSQADYTIALIGRPNCGKTTLFNALTGECQWVGNWPGVTVEGVH
                     GSFEHQGFRIEVVDLPGAYTLTGTRSLDEEVTADFLSGHRCDLIVNVVDAAQLERSLY
                     LSTQVLESQGALNGADGGCPVVVALNRMDHAVAEGVTVAVERLGVELGCPVVPMSAAK
                     GKGVGDLKDLVLAVLRSSERPAPAFPPYAADLLSVVQCMAAARGRGAAARWASIRALE
                     EQSDHPDALALSAARHALAAGVSHRCVERARRDRRKLTDRIDAVMLHPQAGIAAFLAV
                     MYLMFVWTIHVGGAFVDLFDGVTGALLETGLAGMLAQGGLPPLAVLVAEGAARGARTM
                     ASFIPLVACLYVFLAVLEETGYMARAAVVMDRFMRTIGLPGKAFVPLVVGLGCNVPAV
                     MAARTLEDEEDRKATIAMTPFMSCGARLPVYALFAATFFPAAGQNLVFALYLIGIAVA
                     VLTGFVLKRAVFGGEVAPLLLELPAYHQPRLASVLRRAGDRVASFVLDAGRVVVPVVM
                     LLTALNAVTTDFRVVRAGSEPDTLLASAGRAATPLL"
BASE COUNT          214 a          590 c          616 g          295 t
ORIGIN      
        1 cgcggtcatc gtcgccgccc acggcacccg catggtgatc ggcgccggca tggccgacaa
       61 gatcgaggtc gccgcagcct aagatgtcgc aggccgatta caccatcgcc ctgatcggcc
      121 ggcccaattg cggcaaaacc acattgttca acgcgctgac cggcgaatgc caatgggtcg
      181 gcaactggcc cggcgtcacc gtcgagggcg tgcacggctc gttcgagcac cagggcttcc
      241 gcatcgaggt ggtcgacctg cccggcgcct ataccctcac cggcacccgc tcgctggatg
      301 aggaggtcac cgccgatttc ctgtccggcc atcgctgcga cctgatcgtc aacgtggtgg
      361 acgcggcgca gcttgaacgc agcctctacc tttccactca ggtgctggaa tcccaaggcg
      421 cgctgaacgg cgccgacggc ggttgcccgg tggtggtggc gctcaaccgc atggaccacg
      481 ccgtcgccga gggcgtcacg gtggcggtcg aacgcctggg cgtcgaactc ggctgcccgg
      541 tggtgcccat gtcggcggcc aagggcaagg gcgtcggcga cctcaaggat ctggtgctgg
      601 cggtgctgcg ctcatcggag cggccggcgc cggccttccc gccctatgcc gccgatctgc
      661 tgtcagtggt tcagtgcatg gcggcggcgc gggggcgggg agctgcggcc cgctgggcgt
      721 ccatccgggc gttggaagaa caatccgacc atcccgacgc cctggcattg agcgccgccc
      781 gtcatgcatt ggcggccggc gtctcgcatc gctgcgtcga gcgcgcccgg cgcgaccgcc
      841 gcaagctgac cgaccgcatc gacgcggtga tgctgcatcc ccaggccggc atcgccgcct
      901 tcctggcggt gatgtacctg atgttcgtgt ggaccatcca tgtgggcggc gccttcgtcg
      961 atctgttcga cggcgtgacc ggcgcgctgc tggaaaccgg gctggcgggg atgctggcgc
     1021 aagggggcct gccgccgctg gcggtgctgg tggccgaggg cgcggcgcgg ggggcgcgca
     1081 ccatggcgtc gttcatcccg ctggtggcct gcctctacgt cttcctggcg gtgctggagg
     1141 agaccggcta catggcccgc gccgccgtgg tgatggatcg cttcatgcgc accatcggcc
     1201 tgcccggcaa ggccttcgtg ccgctggtgg tggggctggg ctgcaacgtg ccggcggtga
     1261 tggcggcgcg cacgctggag gacgaggaag accgcaaggc caccatcgcc atgacgccgt
     1321 tcatgtcgtg cggcgcccgt ctgccggtct atgccctgtt cgccgccacc ttcttccccg
     1381 ccgccggcca gaacctggtg ttcgcgctct atctgatcgg catcgccgtg gcggtgctga
     1441 ccggattcgt gctcaaacgc gcggtgttcg gcggcgaggt cgcgccgttg ctgctggaat
     1501 tgccggccta tcaccagccg cgccttgcct cggtgctgcg ccgcgccggc gaccgggtgg
     1561 cgtcgttcgt gctggatgcc ggccgggtgg tggtgcctgt ggtgatgctg ctgaccgcgc
     1621 taaacgccgt gaccaccgat ttccgggtgg tgcgcgccgg ctcggaaccg gacaccctgc
     1681 tggcctcggc cggtcgggcc gccacgccgc tgctg
//
LOCUS       DATIKR010000727         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_96085, whole genome shotgun sequence.
ACCESSION   DATIKR010000727 DATIKR010000000
VERSION     DATIKR010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96085"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..670
                     /locus_tag="VLL76_11505"
     CDS             26..670
                     /locus_tag="VLL76_11505"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HSV30179.1"
                     /translation="MAAAEARVIRLLMELRGQGVVDTRTLAAIERIPRDLFVSGPFLD
                     QAYENRALPIGCGQTVSQPLVVGLMTQALEVGDRMKVLEVGTGSGYQAAVLAQVCRRL
                     YTIERHKPLLKQAEERFKHLRIHNITAKLGDGSRGWPEQAPFDRIMVTAAAHDIPPAL
                     VDQLKIGGIMVLPVGDAAGLEQDLVKITKGESGLHIDHLGPVRFVPLVEGVAEG"
     gene            745..>1805
                     /locus_tag="VLL76_11510"
     CDS             745..>1805
                     /locus_tag="VLL76_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing M23
                     family metallopeptidase"
                     /protein_id="HSV30180.1"
                     /translation="MRRLALAAFAPLALAACEPTWQGSAPVTRAQASDARCAGTVRVY
                     PGDTVFSLARRCNVSVREVIEANDLKPPYVLTSGQVLRMPGGGSEYVVQRGDTLLGVA
                     RKLKVDFQILARTNGKSAPYVIQVGEKLRVPGTYQGAPQVARNDVNPGSTGALVIKSP
                     NTPAGRKAAKAKGPPPLPPPEPVAAPTETAESRHPAFQPQQALPPAPPPLAGKGFIWP
                     LRGEMVAEYGPLAKGQHNDGINIAAAKGTPVRAAENGVVAYAGNELKGFGNLLLIKHA
                     DGWMTAYAHNDQLLVSKGDSVKRGQQISTVGATGNVTSPQLHFEIRRGTEAVNPMDHL
                     GRDPAISNLIDRHPGLDPGS"
BASE COUNT          285 a          639 c          620 g          261 t
ORIGIN      
        1 tccgtgttcg ctgaagggtg aggccatggc cgccgccgag gctcgtgtca tccgcttgtt
       61 gatggagctg cgcggccagg gcgtggtgga cacccgcacg ctggcggcca tcgagcgcat
      121 cccgcgcgac ctgttcgtct cggggccgtt cctcgatcag gcctacgaga accgcgccct
      181 gcccatcggc tgcggccaga cggtcagcca gccgctggtg gtcggcctga tgacccaggc
      241 gctggaggtg ggcgaccgca tgaaggtgct ggaggtcggc accggctcgg gctaccaggc
      301 cgccgtgctg gcccaggtgt gccgccgtct ctacaccatc gagcgccaca agccgctgct
      361 gaagcaggcg gaagagcgct tcaagcatct gcgcatccac aacatcaccg ccaagctggg
      421 cgacggctcg cgcggctggc cggaacaggc gccgttcgac cgcatcatgg tgacggcagc
      481 cgcccacgac atcccgccgg ccctggtcga ccagctcaag attggcggca tcatggtgct
      541 gccggtgggc gacgccgccg ggctggagca ggatctggtc aagatcacca agggcgaaag
      601 cggcctgcac atcgaccatc tgggtccggt gcgcttcgtg ccgctggtcg agggcgtggc
      661 cgagggctga ccggcctttc gatttgccca cctaccccct tcgcgcgtat agtgcgacgc
      721 atgagcgcgc ctctacctca tctagtgcgt cggttggccc tggcggcctt cgcgccgctg
      781 gccctggcgg cctgtgaacc gacgtggcag ggcagcgccc cggtgacgcg ggcgcaggcc
      841 tccgacgctc gctgcgccgg tacggtgcgg gtctatcccg gcgacaccgt gttctcgctg
      901 gcgcggcgct gcaacgtgtc ggtccgcgag gtgatcgagg ccaacgacct caagccgccc
      961 tacgtcctga cctcgggtca ggtgctgcgc atgccgggcg gcggctcgga atacgtggtg
     1021 cagcgcggcg acaccctgct gggcgtggcg cgcaagctga aggtggattt ccagatcctg
     1081 gcccgcacca acggcaagtc ggcgccttat gtgatccagg tgggcgagaa gctgcgggtg
     1141 ccgggaacct accagggcgc cccccaggtg gcgcgcaacg acgtcaatcc cggctcgacc
     1201 ggcgcgctgg tgatcaagtc gcccaacacg ccggccggcc gcaaggccgc caaggccaag
     1261 gggccgccgc cgctgccgcc gcccgagccg gtggccgcgc ccaccgagac cgccgaatcc
     1321 cgccatcccg ccttccagcc gcaacaggcg ctgccgccgg cgccgccgcc cttggccggc
     1381 aaggggttca tctggccgct caggggcgag atggtggcgg aatacggccc gctggcgaag
     1441 ggccagcaca acgacggcat caacatcgcg gccgccaagg gcacgccggt ccgcgccgcc
     1501 gagaacggcg tcgtcgccta tgccggcaac gaactcaagg gcttcggcaa cctgctgctg
     1561 atcaagcacg ccgacggctg gatgaccgcc tatgcccaca acgaccaatt gctggtcagc
     1621 aagggcgatt cggtcaagcg cggccaacag atttcgacgg tcggcgccac cggcaacgtc
     1681 acctcgccgc agctgcattt cgagatccgc aggggcaccg aggcggtcaa ccccatggac
     1741 catctggggc gggatccggc gatcagcaac ctaatcgatc gtcatcccgg gcttgacccg
     1801 ggatc
//
LOCUS       DATIKR010000728         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_204334, whole genome shotgun sequence.
ACCESSION   DATIKR010000728 DATIKR010000000
VERSION     DATIKR010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204334"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1177
                     /locus_tag="VLL76_11515"
     CDS             <1..1177
                     /locus_tag="VLL76_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV30181.1"
                     /translation="LTKPTVKTAQFLQPLFEFSGACLGCGETPYIKLLTQLYGDRLLV
                     ANSTGCSSIFGGNLPTTPYSKNADGRGPAWANSLFEDTAEFGLGFRLAVDNHKDHAAL
                     LLKALAAAGQVPEPLANELLHAPQADDAQIAAQRARVEDLRRILSGVPGAEAARLSEL
                     ADYLVEKVVWIIGGDGWAYDIGYGGLDHVIASGKNVNILVMDTEVYSNTGGQASKSTP
                     MGATAKFAVAGKALPKKDLGMMAMAYGDVYVANIAFGSKDVQTVRAIQDAVAYPGVSL
                     IVAYSHCIAHGYDMADSLDQQKLAVQSGYWPLYRFDPRKLGTADSPLTLDSQEPNGNL
                     YEFLKGEARFTMVERADPQRFQGLVGQAEEVIRRRFSTLRRFAGVPDQPAVTKDAAE"
     gene            complement(1265..>1522)
                     /locus_tag="VLL76_11520"
     CDS             complement(1265..>1522)
                     /locus_tag="VLL76_11520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012753253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30182.1"
                     /translation="INDIAGSIAAAVEQQSAATREIARNVQQAATGTQEVSTNIVGVN
                     QASGETGAAASQVLGAARELSQQSEHLRTDVDRFIAKVRGA"
BASE COUNT          239 a          545 c          501 g          237 t
ORIGIN      
        1 gctgaccaag cccaccgtca agaccgccca gttcctgcag cctttgttcg agttctcggg
       61 cgcctgcctg ggttgcggcg agacgcccta catcaagctg ctgacccagt tgtacggcga
      121 ccgcctgctg gtggccaatt cgaccggctg ctcgtcgatc ttcggcggca acctgccgac
      181 caccccctac agcaagaacg ccgacggccg tggcccggcc tgggccaact cgctgttcga
      241 ggacaccgcc gaattcggcc tgggcttccg cctggcggtc gacaaccaca aggatcacgc
      301 cgcgctgctg ctgaaggccc tggccgccgc cggccaggtg ccggagccgc tggccaacga
      361 gctgctgcac gcgccccagg ccgacgacgc ccagatcgcc gcccagcgcg cccgcgtcga
      421 ggacctgcgc cgcatcctgt cgggcgttcc cggcgccgag gcggcgcgcc tgtcggaact
      481 ggccgactac ctggtggaaa aggtggtgtg gatcatcggc ggcgacggct gggcctatga
      541 catcggctac ggcggcctcg accacgtcat cgcctcgggc aagaacgtca acatcctggt
      601 gatggacacc gaggtctatt ccaacaccgg cggccaggcg tcgaagtcca cgcccatggg
      661 cgccaccgcc aagttcgcgg tcgccggcaa ggccctgccc aagaaggacc tgggcatgat
      721 ggcgatggcc tatggcgacg tctacgtggc caacatcgcc ttcggctcca aggacgtcca
      781 aaccgtgcgc gccatccagg acgcggtcgc ctatcccggc gtgtcgctga tcgtggccta
      841 ctcgcactgc atcgcccacg gctacgacat ggccgactcg ctggaccagc agaagctggc
      901 ggtgcaatcg ggctattggc cgctgtaccg cttcgacccg cgcaagctgg gcaccgccga
      961 ctctccgctg accctggaca gccaggagcc caacggcaac ctgtacgagt tcctgaaggg
     1021 cgaggcccgc ttcaccatgg tcgagcgtgc cgatccccaa cggttccagg gcctggtcgg
     1081 ccaggcggaa gaggtcatcc gccgccgctt ctcgaccctg cgccgcttcg ccggcgttcc
     1141 cgaccagccg gcggtcacca aggacgccgc cgagtaacga ggtacggccc cgtccccatg
     1201 aagagggacg gaggatcggg gagaaagccc ctggggaaac ccaggggctt tcgtttttcc
     1261 ccctctacgc cccccgcacc ttcgcgatga agcgatcgac gtcggtgcgc aggtgttccg
     1321 attgctgcga cagctcgcgg gcggcgccca gcacctggga ggcggcggcg ccggtttcgc
     1381 ccgaggcctg gttgacgccg acgatgttgg tcgagacctc ctgggtgccg gtcgccgcct
     1441 gctggacgtt gcgggcgatc tcgcgcgtcg cggccgattg ctgctcgacg gcggcggcga
     1501 tggagccggc gatgtcgttg at
//
LOCUS       DATIKR010000729         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_96101, whole genome shotgun sequence.
ACCESSION   DATIKR010000729 DATIKR010000000
VERSION     DATIKR010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96101"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VLL76_11525"
     CDS             complement(<1..194)
                     /locus_tag="VLL76_11525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014852014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV30183.1"
                     /translation="MTQTVTRHHALTVLVCASAILAISLGLRHSFGLFLQPVSMAGGW
                     SREVFAFAIALQNLIWGLSQP"
     gene            269..637
                     /locus_tag="VLL76_11530"
     CDS             269..637
                     /locus_tag="VLL76_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30184.1"
                     /translation="MTKHLASLSVLAALALAAPAMAEVKTSQTGMGPVLTDGQGMTLY
                     TYDKDEAGKSNCTGDCAKNWPPLAADGSEKGDLSAIARPDGGKQVAYKGKPLYLWVKD
                     TKPGDTTGDGVKGVWHVAKP"
     gene            687..956
                     /locus_tag="VLL76_11535"
     CDS             687..956
                     /locus_tag="VLL76_11535"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014101696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV30185.1"
                     /translation="MSVTDNPARSRFELNVDGKIAFANYRRDGDVLTIPHVEAPPSLR
                     GTGAAGELMKGVMEIARAQGLKVVPICSYASLWIRRHREYHDLLK"
     gene            1033..1422
                     /locus_tag="VLL76_11540"
     CDS             1033..1422
                     /locus_tag="VLL76_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011627984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30186.1"
                     /translation="MRQMTLMEKYPVFVLEIPKAETSHDSVDSIVAFLKQKIAETDKV
                     AFISVFDHVEHTRSIGGDIAPNIKAGKNVVFCFGFALPNPMVMAVRPRSIGVCDTGDA
                     FVISFMEAPMKPANDAMEAWAKAIKDR"
BASE COUNT          303 a          501 c          469 g          232 t
ORIGIN      
        1 ggctgcgaca atccccatat caggttctgc agcgcgatgg cgaaggcgaa cacctcccgg
       61 ctccagccgc cggccatgga gactggttgc aggaacagcc cgaaggagtg ccgaagcccg
      121 agcgaaatgg ccaggatggc cgatgcacag accagaacgg tgagggcgtg gtggcgagtg
      181 acggtttggg tcatgggaac ctccctttcg accctttgac gaccgccatg cccgccgcgt
      241 tacggaaatt cgaccaagga gacgaccgat gaccaagcac ctcgcctcgc tgtccgtcct
      301 ggccgccctc gcgctggccg cccctgccat ggccgaggtc aagacctcgc aaaccggcat
      361 ggggccggta ctgaccgatg gacagggcat gacgctgtac acctacgaca aggacgaggc
      421 cggcaagtcg aattgcaccg gcgactgcgc caagaactgg ccgcccctgg ccgccgacgg
      481 cagcgagaag ggcgacttgt cggccatcgc gcggcccgat ggcggcaagc aggtggcgta
      541 caagggtaag cccctgtatc tgtgggtgaa ggacaccaag ccgggcgaca ccaccggtga
      601 cggcgtcaag ggcgtgtggc acgtcgccaa gccctgaccg aaatgcggcg gcgggcgccg
      661 gcccgccgcc ttgccgggga aaaagcatga gcgttaccga caatcccgcc cgcagccgct
      721 tcgagctgaa cgtggacggc aagatcgcct tcgccaacta ccggcgcgac ggcgacgtcc
      781 tgaccatccc ccatgtggaa gcgccgccgt ccctgcgcgg caccggcgcc gccggcgagt
      841 tgatgaaggg ggtgatggag atcgcgcggg cccagggcct caaggtcgtg cccatctgca
      901 gctacgcctc gctatggatc cgccgtcacc gcgaatatca cgacttgttg aagtgaccga
      961 caattatcaa tgcgctgtgc ccctggggcc gctagaaccc ggctgatttc cccctgccag
     1021 gaacaaaagc gcatgcgcca gatgacgttg atggagaagt atccggtttt cgtgctggag
     1081 atccccaagg ccgagaccag ccacgacagc gtcgattcca tcgtcgcctt cctgaagcaa
     1141 aagatcgccg agaccgacaa ggtcgccttc atctctgtgt tcgaccatgt cgagcacacc
     1201 cgctcgatcg gcggcgacat cgcccccaac atcaaggccg gcaagaacgt ggtgttctgc
     1261 ttcggcttcg ccctgcccaa ccccatggtg atggccgtcc gcccgcgctc gatcggcgtg
     1321 tgcgacaccg gcgacgcctt cgtcatcagc ttcatggaag cgcccatgaa gcccgccaac
     1381 gacgccatgg aagcctgggc caaggccatc aaggaccgct gatttcccgc cttcggaagc
     1441 ggaagccaag acgggaacgg aaggcccggc cctcgcgccg ggtctttctt atttaataat
     1501 tctaa
//
LOCUS       DATIKR010000730         3343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_180664, whole genome shotgun sequence.
ACCESSION   DATIKR010000730 DATIKR010000000
VERSION     DATIKR010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3343
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180664"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2840
                     /locus_tag="VLL76_11545"
     CDS             <1..2840
                     /locus_tag="VLL76_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV30187.1"
                     /translation="QGMSEIKAYVRLNEDPDSAMTEVMSKVNEVRSVLPRGINDPVIK
                     KETGQTFASAYLSFSSEQLNQQQITEYVNRVIQPKLASVPGVANPEIFGGQKFSMRVW
                     LDPEKLAQFGMTAEDVRLALTTNNFTSAAGSTKGAYDVVTTQASTDLKNVEEFKQLVV
                     RHQGTQLVRLSDVADVSLGAENDDMAVFHNGNPAIFVGIYTTPEANPLTVIKQVRDET
                     LRQIRAQLPPGLTASVAYDSTVFIQAAIDEVAKTIAEAAIIVMVVIYLFMGSFRSVFI
                     PVVTVPLSLIGVGLFLMALGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGLS
                     PFKAALVGTREIAGPVIAMTVTLAAVYTPIAFMGGLTGSLFQEFALTLAGSVIISGVI
                     ALTLSPMMASKILKHDDDKKGLSARIDALFDRVRARYERMLAGTLADRPTTVVFALIV
                     LVSLPFLFKAVPTELAPEEDQGVVFTAFNGPASANTDFMVTFAHEIDQKLHSFPEVKD
                     TFLISGIGAPSQGFGGATLTEWDQRDRAAKALTAEFQNTMNTVSGVKASVFPPPPLPG
                     VDGLPVQFVISGIADYRQLQDIQDEMMKRAMASGMFAFIDSDLKYESPQTKVDIDRDK
                     AAAFGISMQQIGDALATMTGGNYVNLVNLQGRSYQVIPQVPREFRLNPQQLGRFHVRA
                     SDGAAIPLSSLVTLSHSVQPVSLNQFNQLNAITIQAFPMPGMTLGQALGFLEDTAKEV
                     LPQGFSVDYAGQSRQYVQEGGALMLTFFFALVIIFLVLAAQFESFRDPLVILVSVPLS
                     ICGALIPLALGVASMNIYTQVGLVTLIGLITKHGILICEVARERQEQEGLSRMDAVKI
                     AAGLRLRPILMTTAAMVAGLIPLLFASGAGAASRFSIAVVIVAGMSIGTLFTLFVLPV
                     IYTFVATDRRKTDHPAERPHEREVETAEAAQ"
BASE COUNT          562 a         1173 c         1018 g          590 t
ORIGIN      
        1 tgcagggcat gagcgagatc aaggcctatg tgcgcctgaa cgaggacccc gattcggcca
       61 tgaccgaggt catgagcaag gtcaacgagg tgcgttcggt gctgccgcgc ggcatcaacg
      121 acccggtcat caagaaggag accggccaga ccttcgcctc ggcctatttg tcgttctcgt
      181 ccgagcagtt gaaccagcag cagatcaccg aatacgtcaa ccgcgtcatc cagcccaagc
      241 tggcctcggt gcccggcgtc gccaatcccg agatcttcgg cggccagaaa ttctcgatgc
      301 gtgtctggct cgaccccgag aagctggcgc aattcggcat gaccgccgag gatgtgcgcc
      361 tggccctgac caccaacaac ttcacctcgg ccgccggttc gaccaagggc gcctatgacg
      421 tggtcaccac ccaggcgtcc accgacctca agaacgtcga ggaattcaag caactggtgg
      481 tgcgccacca gggcacccaa ttggtgcgcc tgtccgacgt ggccgacgtc agcctcggcg
      541 ccgaaaacga cgacatggcg gtgttccaca acggcaaccc ggccatcttc gtcggcatct
      601 acaccacccc cgaggccaac ccgctgaccg tcatcaagca ggtccgcgac gagaccctgc
      661 ggcaaatccg cgcccagttg ccgcccggcc tgaccgccag cgtcgcctat gattccaccg
      721 tgttcatcca ggccgccatc gacgaggtcg ccaagaccat cgccgaggcc gccatcatcg
      781 tcatggtggt gatctatctg ttcatggggt cgttccgctc ggtgttcatc ccggtggtca
      841 cggtgccgct gtcgttgatc ggcgtcgggc tgttcctgat ggcgctggga ttttccatca
      901 acctgctgac gctcctggcc atggtgctgg ccatcggcct ggtggtggac gacgccatcg
      961 tggtggtcga gaacgtccac cgccatatcg aggagggact gagtccgttc aaggccgccc
     1021 tggtcggcac ccgcgagatc gccggcccgg tcatcgccat gaccgtcacc ctggccgccg
     1081 tctacacccc catcgccttc atgggcgggc tgaccggctc gctgttccag gaattcgccc
     1141 tcaccctggc cggctcggtc atcatctcgg gcgtcatcgc gctgaccctg tcgcccatga
     1201 tggcctcgaa gatcctcaag cacgacgacg acaagaaggg cctgtccgcc cgtatcgacg
     1261 ccctgttcga ccgcgtgcgg gcgcgctacg agcgcatgct ggccggcacc ctggccgacc
     1321 gcccgaccac cgtggtgttc gccctgatcg tgctggtcag cctgcccttc ctgttcaagg
     1381 cggtgcccac cgaactggcg cccgaggagg accagggcgt ggtgttcacc gcattcaacg
     1441 gcccggcctc ggccaacacc gacttcatgg tcaccttcgc ccacgagatc gaccagaagc
     1501 tgcactcgtt ccccgaggtc aaggacacct tcctgatctc gggcatcggc gcgccaagcc
     1561 agggcttcgg cggcgccacc ctgaccgaat gggaccagcg cgaccgcgcc gccaaggcgc
     1621 tgacggccga gttccagaac accatgaaca cggtgtcggg cgtcaaggcg tcggtgttcc
     1681 cgccgccgcc gctgcccggc gtcgacggcc tgccggtgca gttcgtgatc agcggcatcg
     1741 ccgattatcg ccaattgcag gacatccagg acgagatgat gaagcgcgcc atggcctcgg
     1801 gcatgttcgc cttcatcgat tccgacctga aatacgagag cccgcagacg aaggtggaca
     1861 tcgaccgcga caaggcggcg gccttcggca tctccatgca gcagatcggc gacgcgctgg
     1921 cgaccatgac cggcggcaac tacgtcaacc tcgtcaattt gcagggccgc tcgtaccagg
     1981 tgatcccgca ggtgccgcgc gagttccgcc tgaacccgca gcaactgggc cgcttccacg
     2041 tccgcgcctc ggacggcgcc gccatcccgc tgtcgtcgct ggtcacgctc agccactcgg
     2101 tccaaccggt gtcgctgaac cagttcaacc agttgaacgc catcaccatc caggccttcc
     2161 ccatgccggg catgacgctc ggccaggcgc tgggcttttt ggaagacacc gccaaggaag
     2221 tgctgccgca gggcttcagc gtcgattatg ccggccagtc gcgccagtac gtgcaggaag
     2281 gcggcgcttt gatgctgacc ttcttcttcg ccctggtgat catcttcctg gtgctggcgg
     2341 cgcagttcga aagcttccgc gacccgctgg tgatcctggt gtcggtgccg ctgtccattt
     2401 gcggcgcgct gatcccgctg gccttgggcg tcgccagcat gaacatctat acccaggtcg
     2461 gcttggtcac cctgatcggc ctcatcacca agcacggcat cctgatctgc gaggtggcgc
     2521 gcgagcgcca ggagcaggaa ggcctgagcc gcatggacgc cgtcaagatc gccgccggcc
     2581 tgcgcctgcg cccgatcctg atgaccacgg cggccatggt ggccggcctg atcccgctgc
     2641 tgttcgcctc gggggccggc gccgcgtcgc gcttctcgat cgcggtggtg atcgtcgccg
     2701 gcatgagcat cggcaccctg ttcaccctgt tcgtgctacc ggtgatctac accttcgtcg
     2761 ccaccgaccg ccgcaagacc gaccacccgg ccgaacggcc gcacgagcgc gaggtcgaaa
     2821 cggcggaggc ggcgcagtag gacacgaatt tggctgtgcc aagaacacca cgcgcttggg
     2881 gctgtctatc ccatcgttag gcaatgggag gccccatgat gcgtggtttg ctcgcactgg
     2941 ccttgtctgt cgtcctggtg caggcggcgt cgcccgccgt cgcccaggtg gaccatgccc
     3001 agcggatagc catggaggtg gcgatgaaac gtgcccaggt cagggcacgt tgtgacttca
     3061 aaatcgtgcg caagctgcct acctatcccc ctacagggac gggtgggccg gtcgtctgcc
     3121 caccgcgccg ctgacccttc cgccgccaac cggaagggcc tgggaggggt tgggggctcg
     3181 tacgcatccc tgtcgccgat accccgcccc tcccgcctgc tcaggaaatc cagtcctgca
     3241 cctgtgccga tgtgatgttg ttgacgccga tcagcagcac cgattcgtcc tggccgtccc
     3301 attgcagcaa agtgccctgc gacacctggc gcaacgtcac gtc
//
LOCUS       DATIKR010000731         1972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_240751, whole genome shotgun sequence.
ACCESSION   DATIKR010000731 DATIKR010000000
VERSION     DATIKR010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240751"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1653
                     /gene="treZ"
                     /locus_tag="VLL76_11550"
     CDS             <1..1653
                     /gene="treZ"
                     /locus_tag="VLL76_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011311685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HSV30188.1"
                     /translation="DGWREVFVPGLGAGARYGFKVGDLTMPDPASRHQPDDVHALSEV
                     VDPLAYEWADRTWRGRPWSEAVVYELHVGTFTPEGTFRAAINKLDYLVDLGVTAIELM
                     PVAEFPGMRGWGYDGVLLFAPEATYGRPEDMKALVDAAHARGLMVMLDVVYNHFGPEG
                     NYLHAYARRFFTDRHHTPWGQAVNYDGADAGPVRDFVIHNALYWLEEFHLDGLRLDAV
                     HAIRDDSAKTILVDLAERVRATFPDRPIHLVLENDDNSADLLGAGLYTAQWNDDIHHA
                     MHRLLTGEAGGYYVDYGPDPVAHLCRCLAEGFAFQGEESPHRRGTRRGQPSAHLPPGA
                     FVAFLQNHDQIGNRALGERIDHLAAEPAVRALTALLLLSPHPPMLFQGEEWGASSPFQ
                     YFCDFGPDLAKAVRKGRKREFEHFPQFQGKNAAKIPDPVDPAAFLRSKLNWAEPAAEP
                     FARKLAQVRELLAIRRREVAPRLAGMTGTENASCTSQGPHLRAQWTLGDGSLLSISAN
                     FSAAPLPGVVSGGGRLLYSTYGGIGPMPAWGVDWYLDDGGTA"
     gene            1650..>1972
                     /locus_tag="VLL76_11555"
     CDS             1650..>1972
                     /locus_tag="VLL76_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HSV30189.1"
                     /translation="MTVSEALDRLAQLAGIEDGWWDFFGNWRPVSVETKKAFLTAMGF
                     RVDSDDAVYASLHELENRPWRRWLEPVVVFDETWGDPTVTVTLPAERDGHVMDWALEE
                     ELGIV"
BASE COUNT          301 a          699 c          659 g          313 t
ORIGIN      
        1 gacggctggc gcgaggtttt cgtgcccggc ctgggcgccg gtgcccgcta cggcttcaag
       61 gtcggcgacc tgacaatgcc cgacccggcc tcgcgccacc agcccgacga cgtccacgcc
      121 ttgtcggaag tcgtcgaccc cctggcctat gaatgggccg accgcacctg gcgcgggcgg
      181 ccgtggtcgg aagcggtggt gtacgaactc cacgtcggca ccttcacgcc cgagggcacc
      241 ttccgcgccg ccatcaacaa gctggattac ctggtggatc tgggcgtcac cgccatcgag
      301 ctgatgccgg tcgccgaatt ccccggcatg cgcggctggg gctatgacgg cgtgctgctg
      361 ttcgcccccg aggccaccta tggccggccc gaggacatga aggcgctggt ggacgccgcc
      421 cacgcgcggg gcctgatggt catgctcgac gtggtctaca accacttcgg ccccgaggga
      481 aattacctgc acgcctatgc taggcggttc ttcaccgacc gccaccacac gccgtggggc
      541 caggcggtca attacgacgg cgccgacgcc ggcccggtgc gcgacttcgt catccacaac
      601 gcgctgtatt ggctcgagga attccatctc gacggcctgc gcctggacgc cgtccacgcc
      661 atccgcgacg acagcgccaa gaccatcctg gtggacctgg cggaacgggt gcgcgccacc
      721 ttccccgacc ggcccatcca tctggtgctg gaaaacgacg acaacagcgc cgacctgctg
      781 ggcgccggcc tctacaccgc ccagtggaac gacgacatcc accacgccat gcaccgcctg
      841 ctgaccggcg aggcgggcgg ctattacgtc gattacggcc ccgatccggt ggcccatctg
      901 tgccgctgcc tggccgaggg cttcgccttc caaggcgagg aatcgccgca tcggcgcggc
      961 acccggcgcg gccagccctc ggcccatttg ccgccgggcg ccttcgtcgc cttcctgcag
     1021 aatcacgacc agatcggcaa ccgcgccctg ggcgagcgca tcgaccatct ggcggccgag
     1081 ccggcggtgc gggcgctgac cgcgctgctg ctgctgtcgc cccatccgcc catgctgttc
     1141 cagggcgagg aatggggggc gtcgtcgccc ttccagtatt tctgcgactt cggccccgac
     1201 cttgcgaagg cggtgcgcaa gggccgcaag cgcgagttcg agcatttccc gcaattccag
     1261 ggcaagaacg cggccaagat ccccgacccg gtcgatcccg ccgccttcct gcgctcgaag
     1321 ctgaattggg ccgagccggc ggccgagccg ttcgcccgca agctggcgca ggtgcgcgag
     1381 ctgctcgcca tccgccgccg cgaggtggcg ccgcgcctcg ccggcatgac cggaaccgag
     1441 aacgcgtcgt gcacgtcgca gggccctcac ctgagggcgc aatggacctt gggcgatggc
     1501 agccttttgt ccatatcggc gaacttctcg gcagccccgc ttccaggggt cgtgtccggt
     1561 ggcggaagac tgctatactc gacctatggg ggcatcgggc cgatgccggc ttggggtgtg
     1621 gactggtatt tggacgacgg gggaactgca tgaccgtttc ggaggcgctc gaccgcctgg
     1681 cgcaactcgc cggcatcgag gacggctggt gggatttctt cggcaattgg cggccggtgt
     1741 cggtcgagac gaagaaagcc ttcctgaccg ccatgggctt ccgcgtcgac agcgacgacg
     1801 ccgtttacgc cagcctgcac gagcttgaga accgcccgtg gcgccgctgg ctggagccgg
     1861 tggtggtgtt cgacgagacc tggggcgacc ccaccgtcac cgtgaccctg ccggccgagc
     1921 gcgacggcca cgtcatggac tgggcgctgg aagaggaact gggcatcgtc ca
//
LOCUS       DATIKR010000732         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_107929, whole genome shotgun sequence.
ACCESSION   DATIKR010000732 DATIKR010000000
VERSION     DATIKR010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107929"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2124)
                     /locus_tag="VLL76_11560"
     CDS             complement(<1..2124)
                     /locus_tag="VLL76_11560"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV30190.1"
                     /translation="MAPGIASLTRGTLLRMALRVGLVIVAGTGFAYVYFTMTGQAGEA
                     VPMVLALGIATLALQLLAVHHVLRRRVTQPLAALIDAAQKVAGSNLEARVPVRGDDEL
                     ACLGQAFNTMTEQFASQRRTLAETVERFERMVEGSTSALWEFNPATHDFYLAPRFRDL
                     LGWSDVANPFSYWESMIHPDDHDPVMDAFRAHMETHEPFQVEYRLRRADGSYLWVHVR
                     GRCIHDQYGGLALMSGSLTDISKRKKAEAELEAYRSQLEQLVERRTAEARDSELRFRT
                     LAEATSEGILVHADDRVLDCNGVMEVMFGCNCPCEGEPRIACNRTVGDLFAPQCRDEA
                     MAAMAAGAPGPLEFLGMRADGSTFPIEVRTKRAVKNDTAILVTAIGDRTEQKALNERL
                     TRLADEAQAASRAKSDFLATMSHEIRTPMNGIIGMAQLLKDTPLSAEQRDHVETLCAS
                     GEALQTLLNDILDLSKLESGRLELDRRPFGLRALVAQVADLFRSRAEEKGLELAWTVD
                     PAVPDNVVGDPLRLRQVLTNLVGNAVKFTELGGVRLFAEARDTGDTGCTVMLRVADTG
                     IGIPEDTLARLFTPFGQGDASIAGRFGGTGLGLAICKRLVELMDGRLGVDSHAGEGSV
                     FWFELPLAIDPTTPQAPVPAPIGEPARPLAILLAEDNPVNQKVVEAFLTRRGHEVTVV
                     GNGADAVSTAAGRRFNAILMDMQMPV"
     gene            2321..>2662
                     /locus_tag="VLL76_11565"
     CDS             2321..>2662
                     /locus_tag="VLL76_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018940547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HSV30191.1"
                     /translation="MEKFSVADIALVGLGEVGGRFFEEMLKLKERGIKIVCVAELDDT
                     PGRRHALEMGIPLKTLEEIAGMGHAVDVVFDLTGSPSVRKWLREKMQETGNRHTIIAP
                     ETMARLLWAVVS"
BASE COUNT          429 a          884 c          923 g          426 t
ORIGIN      
        1 caccggcatc tgcatgtcca tcaggatggc gttgaagcgg cggccggcgg cggtggatac
       61 ggcgtcggcg ccgttgccca ccacggtgac ctcgtggccg cgtcgggtga ggaacgcctc
      121 caccaccttc tggttcaccg gattgtcctc ggccagcagg atcgccagcg gacgcgccgg
      181 ctcgccgatg ggggcgggca ccggggcctg gggcgtggtg gggtcgatgg ccagcggcag
      241 ttcgaaccag aaaacgctgc cctcgccggc atggctgtcg acgcccagcc ggccgtccat
      301 caattcgacc agccgcttgc agatggcgag gcccaggccg gtgccgccga agcggccggc
      361 gatcgaggcg tcgccctggc cgaacggggt gaacagccgc gccagggtgt cttccgggat
      421 gccgatgccg gtgtcggcca cgcgcagcat cacggtgcaa ccggtgtcgc cggtgtcgcg
      481 ggcctcggcg aacaggcgca cgccgcccaa ttcggtgaac ttgacggcgt tgcccaccag
      541 gttggtcagc acctggcgca gccgcaacgg gtcgccgacc acgttgtcgg gcaccgccgg
      601 gtccaccgtc caggccagct ccaacccctt ctcctcggcg cggctgcgga acaggtcggc
      661 gacctgggcg accagggcgc gcaggccgaa cggccggcgg tccaactcca gccggccgga
      721 ttccagcttg gacagatcaa ggatgtcgtt gagcaaggtc tgcagcgcct cccccgaggc
      781 gcacagcgtc tcgacatgat cgcgctgctc ggcggacagc ggggtgtcct tcagcaattg
      841 cgccatgccg atgatgccgt tcatgggggt gcggatttcg tggctcatgg tggccaggaa
      901 gtccgatttg gcgcggctgg cggcttgcgc ttcgtcggcc aagcgggtca gccgctcgtt
      961 cagggccttc tgctcggtgc ggtcgccgat ggcggtgacc aggatggcgg tgtcgttctt
     1021 caccgcccgc ttggtgcgga cctcgatggg gaaggtcgag ccgtcggccc gcatgcccag
     1081 gaattccagc ggccccggcg cgccggcggc catcgccgcc atcgcctcgt cgcggcattg
     1141 cggcgcgaac aggtcgccga ccgtgcggtt gcaggcgatg cgcggctcgc cctcgcacgg
     1201 gcagttgcag ccgaacatga cctccatcac gccgttgcag tccagcacgc ggtcgtccgc
     1261 gtgaaccagg atgccctcgg acgtggcttc ggccagggtt cggaagcgca actcgctgtc
     1321 gcgggcctcg gcggtgcgcc gttccaccaa ttgctccaac tggctgcgat aggcttccag
     1381 ttcggcctcg gccttcttgc gcttgctgat gtcggtcagc gaacccgaca tgagggcaag
     1441 gccgccatac tggtcgtgga tgcagcggcc gcgcacatgc acccaaagat agctgccgtc
     1501 ggcgcgccgc agccggtact cgacctggaa cggttcgtgg gtttccatgt gggcgcggaa
     1561 ggcatccatg accggatcgt ggtcgtccgg gtggatcatg gattcccagt acgagaacgg
     1621 gttggccacg tcgctccagc ccagcaggtc gcgaaagcgc ggcgccagat agaagtcgtg
     1681 ggtggccggg ttgaactccc acagggccga ggtcgagccc tcaaccatgc gctcgaaccg
     1741 ctccaccgtc tcggccaggg tccgccgctg gctggcgaac tgctcggtca tggtgttgaa
     1801 ggcctgcccc aggcacgcca gttcgtcgtc gccgcgcacc ggcacccgcg cttccaggtt
     1861 gctgcccgcg accttctggg cggcgtcgat cagggcggcc agcggctggg tgacgcgccg
     1921 gcgcagcaca tggtggacgg ctagcaattg caacgccagg gtggcgatgc ccaatgccag
     1981 caccatcggc accgcctcgc ccgcttgccc ggtcatcgtg aaatagacgt aggcaaagcc
     2041 ggtgccggcg acgatgacca agccgacccg caaggccatc cgaagcaagg tgccgcgcgt
     2101 cagagaggcg atcccgggcg ccattccccc atccccaaaa agtgctgtct ccaggctagc
     2161 gctttggcgc aaccggggga atacggtggt gacccctgcc gcccccgtgg aatgggtcgc
     2221 ccgcgcgcgc gcaacgatgg atgagcacag tagcggttgc cgtcgttcat atgagggact
     2281 actgttccag cataaactaa taatgaggag ggaggatcaa atggagaaat tttcagttgc
     2341 ggatatcgcc ctggtcggcc tgggcgaggt cggcggccgg ttcttcgagg agatgctgaa
     2401 gctgaaggag cgcggcatca agatcgtctg cgtcgccgaa ctcgacgaca cccccggccg
     2461 ccgccatgcc ctcgagatgg gcatcccgct gaagacgctg gaggaaatcg ccggcatggg
     2521 ccacgccgtc gacgtggtgt tcgacctgac cggctcgccg tcggtgcgca aatggctgcg
     2581 cgagaagatg caggaaaccg gcaaccgcca caccatcatc gcgcccgaaa ccatggcccg
     2641 gctgctgtgg gcggtggtca gc
//
LOCUS       DATIKR010000733         3436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47850, whole genome shotgun sequence.
ACCESSION   DATIKR010000733 DATIKR010000000
VERSION     DATIKR010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47850"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VLL76_11570"
     CDS             <1..559
                     /locus_tag="VLL76_11570"
                     /inference="COORDINATES: protein motif:HMM:NF020305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TnsA endonuclease N-terminal domain-containing
                     protein"
                     /protein_id="HSV30192.1"
                     /translation="KAGRSIHWESQLERDFVYLLEFDPAVLDYREQPETIRLTVDGKP
                     RRYTPDFLVRTTSLMVVYEVKPADKAARPEMAALFAAAAEHYAGRGMRHQVVTEADIR
                     IRPYLDNVALLLRYRSHPVDADVEARILDRLAFEPASLGELVASLAPYADMAAVLALL
                     ANRRLAADLARRLDRDAVIRLPGEG"
     gene            563..2554
                     /locus_tag="VLL76_11575"
     CDS             563..2554
                     /locus_tag="VLL76_11575"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HSV30193.1"
                     /translation="MPSLALARNQRVWIDDAMHEVRGRAGGEVVHLERVRDGEMRVVT
                     HRELAELICADKAKLVAVEGTGREPRIVEHNLEKDIAALPPKVRMELDRRREYLKAVE
                     EGGVLTLTERSLSGLVRQVAEKIGDAKPPHWTTIYRWVSRLRRASGDIRAVIPAFDRR
                     GNRTRRLDTEVIRLIDEGIDQRFMQREQPPARAAHDYVVRMVDDLNQVNPPERKLRLP
                     SLRSIYRAIARLDDYEVTLRRFGKRIADLKYHVVREAPKPTRPLERVEMDHTKLDLMV
                     LDDAIGTLRGRPWLTLAVDVYTRMPVGFHLGFSDPCANSVVSCLLHAIRPKTYVAERY
                     PDIKHGWDCYGVPETLVVDNGRDFHSKDFEFACLQLGIQVQHTPRKSPWMKGTVERYF
                     GQLNQGLIHSQPGTTFSNIAARGDYDPKKNGIITFSLLVELIHQWIIDVYARSEHRGI
                     ADLPGERWKAGVKEYPVRLPAKAADLDVVLWQTDTKTVNDYGIAVDQLIYNSEELCAL
                     RRVHGGRLRTTVKIDPEEMGDILVLDPAKGAFFRVPAVSQGYARGLTRWQHKVILAEA
                     KRNTKAKIDIVHLARTRETLLEKAHEARNAKKGTKFSSRVARFVGIDSRPHTKPVEAP
                     PSPAPEPVPPPAPEPPAAPHSPSHDDDDWGGSYDLPPRR"
     gene            2557..>3436
                     /locus_tag="VLL76_11580"
     CDS             2557..>3436
                     /locus_tag="VLL76_11580"
                     /inference="COORDINATES: protein motif:HMM:NF017437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HSV30194.1"
                     /translation="MDADPHQLTEKLFIHHPRMRQAQRMMERCRTWSQGAQEPYCLLV
                     IGPTGVGKTTLIKDYLKNNPRADTDVATTIPVLDAIIPAPASMKGMAVELLTKLGDPM
                     AQRGTLNQQTWRLRKLLQACGVQLIVLDEFNHFIDRDNERVLRTVADWLKVLIDTTGI
                     PVVLVGTPNSRSVLDANEQLRRRFGTQERLEPFRWEGDGRDHFRRFLREVDERLPLPE
                     RSGLDGTDMAFRFFCASAGTIAPVMKIVRKATHLALDAGMARLELPLLARAYAEDPGD
                     PDGPNPFVGALPAKIVA"
BASE COUNT          602 a         1196 c         1097 g          541 t
ORIGIN      
        1 caaggccggg cggtcgatcc attgggaatc ccagcttgaa cgggacttcg tgtacctact
       61 ggaattcgat ccggccgtgc tggactaccg cgagcagccg gagaccatcc gcctcaccgt
      121 cgacggcaag ccgcgccgtt acacgccgga cttcctggtc cgaaccacct ccctgatggt
      181 ggtctacgag gtcaagccgg cggacaaggc cgcccgtccg gaaatggccg cgctgttcgc
      241 cgcggcggcc gagcattacg ccggccgggg catgcgccac caggtggtca ccgaggccga
      301 catccgtatc cggccgtacc tcgacaacgt cgccctgctg ctgcgctatc gcagccatcc
      361 cgtcgatgcc gacgtcgagg cccggatcct cgaccgtctc gctttcgagc ctgcatcttt
      421 gggagaactg gtcgcctcgc tcgctcccta tgccgatatg gctgcggtgc tggcgttgct
      481 ggccaaccgt cggctggccg ccgatctggc ccgccggctg gatcgggatg ccgtgatccg
      541 gctgcccggg gagggctgac ccatgccgtc gctcgccctt gcccgcaacc agcgtgtctg
      601 gatcgatgac gccatgcacg aagtgcgggg ccgcgccggt ggtgaggtcg tccacctgga
      661 aagggtgcgc gacggcgaaa tgcgcgtcgt cacccatcgc gagttggccg agctgatatg
      721 cgctgacaag gccaagctgg tggccgtcga gggcaccggg cgcgagccgc ggatcgtcga
      781 gcacaacctg gaaaaggaca ttgccgccct gcccccaaag gtgcggatgg aactcgaccg
      841 ccggcgggaa tacctgaagg ccgtcgagga aggcggcgtg ctgacgctga ccgagcggtc
      901 gctgtcgggg ctggtccgcc aggtggccga gaagatcggc gacgccaagc cgccgcactg
      961 gaccaccatc taccgctggg tcagccggct tcgcagggca tcgggcgaca tccgggcggt
     1021 cattcccgcc ttcgaccgcc ggggcaaccg cacgcggcgc ctggataccg aggtcatccg
     1081 gctgatcgac gagggtattg accagcggtt catgcagcgg gagcagccgc cggcgcgggc
     1141 cgcccacgat tacgtagtcc gcatggtcga cgaccttaac caggtcaatc cgcccgagcg
     1201 caagttacgc ctgcccagcc tgcgctccat ctaccgcgcc atcgcccgcc tcgacgatta
     1261 cgaggtcacg ctgcggcgtt tcggcaagcg gatcgccgac ctgaaatacc acgtcgtccg
     1321 cgaggctccg aagcccaccc gacccttgga acgggtggag atggatcaca ccaagctgga
     1381 cctgatggtg ctggatgacg ccatcggcac gttgcgcggc cggccgtggc tgacgctggc
     1441 ggtcgacgtc tacacccgca tgccggtggg atttcacctg ggcttcagtg atccctgcgc
     1501 caattccgtc gtctcgtgcc tgctgcacgc catccggccg aagacctacg tggccgaacg
     1561 ctaccccgac atcaagcacg gttgggactg ctatggcgtg cccgaaacgc tggtggtcga
     1621 taacggccgc gacttccact cgaaggattt cgagttcgcc tgcctgcagt tgggcatcca
     1681 ggtgcagcac acgccccgca agtcgccttg gatgaagggc acggtcgaac gctatttcgg
     1741 ccagttgaac cagggcctga tccattccca gccggggacc accttctcca acattgccgc
     1801 ccgcggcgac tacgatccga agaagaacgg catcatcacc ttctcgctgc tggtcgagct
     1861 gatccatcag tggatcatcg acgtctacgc ccgcagcgag caccggggca tcgcggacct
     1921 gccaggcgag cgatggaagg ccggtgtgaa ggaatacccg gtgcggctac cggccaaggc
     1981 ggccgacctc gacgtggtgc tctggcagac cgacaccaag acggtcaatg attacggcat
     2041 tgccgtcgat cagctcatct acaacagcga ggaattgtgc gccctgcgcc gtgtgcacgg
     2101 cggcaggctg cggaccaccg tcaagatcga tcccgaggaa atgggcgaca tcctggtgct
     2161 cgatccagcc aagggggcgt tcttccgggt tccggcggtc agccagggct atgcacgcgg
     2221 cctgacgcgg tggcagcaca aggtgatcct cgccgaggcc aagcggaaca ccaaggcgaa
     2281 gatcgatatc gtccatctgg cgcggacccg cgagaccctg ctggaaaaag cccacgaggc
     2341 ccggaacgcc aagaagggga cgaagttctc ctccagggtc gcccgtttcg tcgggatcga
     2401 cagccgcccg catacaaagc ccgtggaagc gccgccgtcc cctgctcctg agcccgttcc
     2461 gccgccagcg ccggagccgc cggccgcgcc gcactcgcca tcccatgacg atgacgattg
     2521 gggcggcagc tacgaccttc cgccccggag atgagcatgg atgccgatcc ccaccagctg
     2581 accgagaagc tcttcatcca ccatccccgc atgcgccagg cgcagcggat gatggagcgt
     2641 tgccgcacct ggtcccaggg cgcccaggag ccctattgcc tgttggtgat cggcccgacc
     2701 ggcgtcggca agaccaccct catcaaggat tacctcaaga acaatccccg cgccgacacg
     2761 gacgttgcca ccaccatccc ggtgctggac gccatcatcc ccgctccggc gagcatgaag
     2821 ggcatggccg tcgagctgct gaccaagctg ggcgacccca tggcccagcg cggcaccctg
     2881 aaccagcaga catggcgcct gcgcaagctg ctgcaggctt gcggtgtcca gttgatcgtg
     2941 ctggacgaat tcaaccactt catcgaccgc gacaacgaac gggtcctgcg caccgtcgcc
     3001 gactggctga aggtgctgat cgacaccacc ggcatccccg tcgtgctggt gggcacgccg
     3061 aattcccgct cggtgctgga cgcaaacgag cagctgcgtc gccggttcgg cacccaggag
     3121 cggctggaac cgttccgctg ggaaggcgac ggccgcgatc acttccgccg cttcctgagg
     3181 gaggtggacg agcgcctgcc gctgcccgaa cgatccggcc tggacggcac ggatatggcg
     3241 ttccgcttct tctgcgccag cgccggcacc atcgccccgg tgatgaagat cgtgcgcaag
     3301 gccacccacc ttgccctgga tgcgggcatg gcccgcctgg aactgccgct gctggcccgc
     3361 gcctatgccg aggaccccgg cgatccggac ggtcccaatc ccttcgtggg cgcgctgccc
     3421 gccaagatcg tcgccc
//
LOCUS       DATIKR010000734         5570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_84044, whole genome shotgun sequence.
ACCESSION   DATIKR010000734 DATIKR010000000
VERSION     DATIKR010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84044"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1390)
                     /gene="rfaE1"
                     /locus_tag="VLL76_11585"
     CDS             complement(<1..1390)
                     /gene="rfaE1"
                     /locus_tag="VLL76_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HSV30195.1"
                     /translation="MTEISALVERVEHLKDTPVLCVGDAMLDRFVYGSVDRVSPEAPI
                     PVVVVEHETAMLGGAGNVVRNLVALGAAPAFVSVVGDDQAGREVTRLVGEHCEIDPCI
                     VVETGRQTTIKTRFFASSQQLLRADRETRTGLTDAIREQILIRAERLLSKVKAVVLSD
                     YGKGVLADPIAAELIKRARAQGKPVVVDPKGTDYGKYRGATVLTPNRKELADATKMPV
                     DCDDAIVAAARHLIDTCGVESVLVTRSQDGMTLVSSCGTVHHLPAEAREVFDVSGAGD
                     TVVATLAAAIGSGASLLEGARIANVAAGIVVAKVGTAVAYAAELVSALHQDDLLSGDT
                     KIQTLETASSLIERWRRKGLKVGFTNGCFDLLHPGHVSLLAQSKAACDRLVVGLNSDA
                     SVGRLKGPSRPVQSEAARATVLASLASVDLVVIFGEDTPLRLIETLRPDVLVKGADYT
                     VATVVGADIVMGY"
     gene            complement(1461..2219)
                     /locus_tag="VLL76_11590"
     CDS             complement(1461..2219)
                     /locus_tag="VLL76_11590"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HSV30196.1"
                     /translation="MHSATAPAHPPLARVPDGTRVYAVGDVHGRADLLHRLLARIEAD
                     AATLRDKRVVLVFLGDYVDRGPDSRPVVERLMAGPPSSGPLAGAEWVCLKGNHEEYLV
                     RFITETSVGTAWCLNGGLETVRSYAGRLPEGGESDMAGLQLALSRALPPAHLRFLSRL
                     RLAHVEGDYMFVHAGIRPGVPLDQQDPADLLWIRDDFLFDATPLDKVVVHGHTPSTLP
                     EIRPHRIGIDTAAYRSGQLTALVLDGTDRSFLVS"
     gene            2339..3682
                     /locus_tag="VLL76_11595"
     CDS             2339..3682
                     /locus_tag="VLL76_11595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30197.1"
                     /translation="MNASAFGGKQQQEVVTPESLLFDAAERVGRIREGRLGLHLHMSR
                     LLPQNREDAKIRIAFRIFESMVDMYRGQMFLLTNSDIVLMCKDARIADLDAIVYKLRA
                     LFSKDPLTYTESADGSDRFVTYYELESQYDEFFALCGQLVQDAKKRIADQRSAPQVQP
                     LDARNLSHVLERIGATDIAGVVRRQPCVRITDKMVAEVAFQEFFMSIADLQKALAPDV
                     NILANRWLFQHLSTVLDQRVLSVLLDAGFRQQPTAFSLNLNMATVETPAFQQFAAAIK
                     GRAGLVVEFQLVDIFNNLDGFFRARDLLKSQGHVTVLDGMSPITLQFMDAELYHTDFV
                     KVNWSPDMADDIQTAELTHALAPVGFDHVILARCDSEAAIAWGLNMGIRHFQGRFLDS
                     MVAAVTMAQCKKSSACTLAQCTMRHGVISGRLRAECGDFDMLDAFPPLKALRAPR"
     gene            3679..4929
                     /locus_tag="VLL76_11600"
     CDS             3679..4929
                     /locus_tag="VLL76_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30198.1"
                     /translation="MINNPPAGTKPPSQEGLLLDYLARLERHRKDRRAAHIHLSGLQQ
                     VNRRDHHLRIAANTFEPLVKLMQAQVFSLGNSDLMVVYKAQAQEEVESSIVKLRFLFS
                     DDPLVIEDAAGRMGTFCTWYDLDREYEVLVTLAQKMQQDEAAKRKAELERQGLDFRAE
                     QNRPKGTPFTPELLARTEGALGQADLANLMRRQAVCAMVGKAPPQPVFHELFISIADL
                     RQTLMPSVNMNSSPWLFQQLTETLDRRVLSLLNKHDDRTLEGDISINLNVSTILSPEF
                     LVFDDNVKAGMRGTIVLELQKVDIFADLGAYLFARDFAHDRGYRICVDGLTYSQLPFV
                     DRERLGADLIKLVWDPSLAHDTEQKSDALKRIGVTRIILCRCDTPSAIEWGHSVGITL
                     FQGRHVESMLANDTRRRGIARRRV"
     gene            4985..>5570
                     /locus_tag="VLL76_11605"
     CDS             4985..>5570
                     /locus_tag="VLL76_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV30199.1"
                     /translation="MTEPAIQVESLAKSFGDLVAVDHVDFTVARGSVTALLGGNGAGK
                     TTTISMLLGLLLPSAGTIRVLGEDMVRHRYRVLPRLNFSSPYVELPLRLSVAENLTVY
                     GHLYGVPDLKRRIRDLAEELDLGKLLKRPTGKLSAGQKTRVALAKALLNEPELLLLDE
                     PTASLDPDTADWVRGYFDSYRRRTGATILLASHNM"
BASE COUNT          935 a         1938 c         1809 g          888 t
ORIGIN      
        1 catagcccat gacgatgtcg gcgccgacca cggtggcgac ggtgtagtcg gcccccttga
       61 ccagcacgtc gggcctcagc gtctcgatca ggcgcagcgg cgtgtcctcg ccgaagatca
      121 ccaccagatc gacgctggcc aggctggcca gcacggtggc gcgcgccgcc tcggattgca
      181 ccggccgcga cgggcccttg agccggccga ccgaggcgtc cgagttcaat cccaccacca
      241 gccggtcgca agcggccttg ctttgcgcca gcagcgacac gtggccagga tgcagcaggt
      301 cgaagcagcc gttggtgaac ccgaccttca ggcccttgcg gcgccagcgc tcgatcaggc
      361 tgctggcggt ttccagggtc tggatcttgg tgtcgccgct caacagatcg tcctggtgca
      421 gcgcgctgac aagctcggcg gcataggcga cggcggtgcc gaccttggcg acgacgatgc
      481 cggcggcgac gttggcgatg cgggcgccct cgagcaggct ggcgcccgaa ccgatggcgg
      541 cggccaaagt ggcgaccacg gtgtcgccgg cgcccgagac gtcgaacacc tcgcgcgcct
      601 cggccggcag gtggtgcacg gtgccgcagc tcgacaccag cgtcatgccg tcctggctgc
      661 gcgtgaccag cacggactcg acgccgcagg tgtcgatcag gtggcgggcg gcggcgacga
      721 tggcgtcgtc gcaatccacc ggcattttgg tggcgtcggc cagttccttg cggttgggcg
      781 tcagcacggt ggcgccgcga tacttgccgt aatcggtgcc cttgggatcg acgaccaccg
      841 gcttgccctg cgcccgggcg cgcttgatca gttcggcggc gatggggtcg gccagcacgc
      901 ccttgccgta atcggacagc accaccgcct tgaccttgga cagcagccgt tcggcgcgga
      961 tcaggatctg ctcgcggatg gcgtcggtca ggccggtgcg ggtctcgcgg tccgcccgca
     1021 gcaattgctg cgacgaggcg aagaagcggg tcttgatggt ggtctggcgg ccggtctcga
     1081 caacgatgca ggggtcgatc tcgcaatgct cgcccaccag ccgggtgacc tcgcggccgg
     1141 cctggtcgtc gccgaccacc gacacgaagg ccggcgcggc gcccagggcc accaggttgc
     1201 gcaccacgtt gccggcgccg cccagcatgg cggtctcgtg ctcgaccacc acgacgggga
     1261 tcggcgcctc gggcgagacg cgatcgacgg agccgtagac gaagcggtcc aacatggcgt
     1321 cgccgacgca cagcaccggc gtgtccttca gatgctcgac ccgttcgacg agagcggaaa
     1381 tctcggtcat tgccccaccg ttagcttggc tggaacggat cggctaccgc aacggcggcg
     1441 ggactgcaag ataaaacccc tcaactgacc aggaagctgc ggtcggtgcc gtccagcacc
     1501 agggcggtca actggcccga gcggtaggcg gcggtgtcga tgccgatgcg gtggggacgg
     1561 atttcgggca gggtgctggg ggtgtggccg tgcaccacca ccttgtccag cggcgttgcg
     1621 tcgaacagga agtcgtcgcg gatccacaac aggtcggcgg ggtcctgctg gtccagcggc
     1681 acgccggggc ggatgccggc atggacgaac atgtagtcgc cctccacatg cgccagcctg
     1741 aggcgcgaca gaaagcgcag gtgggccggc ggcagtgcgc gcgacagcgc cagttgcagc
     1801 ccggccatgt cggactcgcc gccttcgggc agccggccgg cataggaccg caccgtctcg
     1861 agcccgccgt tgaggcacca ggcggtgccg acgctggtct cggtgatgaa gcggaccagg
     1921 tattcctcgt ggttgccctt caggcacacc cactcggccc cggccagcgg cccggaactg
     1981 ggcggtccgg ccatcaggcg ctcgaccacc ggccgcgaat ccggcccgcg gtccacgtaa
     2041 tcgcccagga acaccagcac cacccgcttg tcgcgcaacg tcgcggcgtc ggcctcgatg
     2101 cgcgccagca gccggtgcag caggtcggcc cggccatgca cgtcgcccac ggcatagacg
     2161 cgggttccgt cgggaacccg ggcgagcggg ggatgggccg gggcggttgc cgaatgcatt
     2221 tcgctctagg ctgacatgga cgtgcgatgt attttctaac ggttaacgac tttgcccttt
     2281 aaatgggcgc agaacaacgc ctgggaaaga gcggccataa tcgccgccgg ggaatggaat
     2341 gaacgcatcg gcgttcggcg ggaaacaaca gcaggaagtg gtcacgccgg agagcctgct
     2401 cttcgacgcg gccgaacgcg tcggccgcat ccgcgagggc cggctgggcc tgcacctgca
     2461 catgtcgcgc ctgttgccgc agaaccgcga ggacgcgaag atccgcatcg cgttccggat
     2521 cttcgaatcc atggtcgaca tgtatcgcgg ccagatgttc ctgctgacca attccgacat
     2581 cgtgctgatg tgcaaggatg cgcgcatcgc cgacctggat gccatcgtct acaagctgcg
     2641 ggcgctgttc tcgaaggacc cgctgaccta taccgaatcg gccgatggca gtgaccgctt
     2701 cgtcacctat tacgagctgg aaagccagta cgacgagttc ttcgccctgt gcggccagtt
     2761 ggtgcaggac gccaagaagc gcatcgccga ccagcgctcc gcgccccagg ttcagccgct
     2821 ggacgcgcgt aacctcagcc acgtgctgga gcgcatcggc gccaccgaca tcgccggcgt
     2881 ggtgcgccgc cagccctgcg ttcgcatcac cgacaagatg gtggccgagg tcgcgttcca
     2941 ggaattcttc atgtccatcg ccgatttgca gaaggcgctg gcccccgacg tcaacatcct
     3001 ggccaaccgc tggctgttcc agcacctgtc caccgtgctc gaccagcggg tgctgtcggt
     3061 gctgctggac gccggcttcc gccagcagcc gacggcgttc tcgctgaacc tcaacatggc
     3121 cacggtcgag accccggcct tccagcaatt cgccgccgcc atcaagggcc gcgccgggct
     3181 ggtggtcgag ttccagttgg tggacatctt caacaacctg gacggattct tccgcgcccg
     3241 cgacctgctg aagtcccagg gccacgtcac cgtgctggac ggcatgagcc ccatcacgct
     3301 gcaattcatg gacgccgagc tctatcacac cgacttcgtc aaggtgaact ggagcccgga
     3361 catggccgac gacatccaga ccgccgaact gacccacgcg ctggcgccgg ttggcttcga
     3421 ccacgtcatc ctggcgcgct gcgattccga ggcggccatc gcctggggcc tcaacatggg
     3481 catccgccac ttccagggcc gcttcctcga ttccatggtg gcggcggtga ccatggcgca
     3541 atgcaagaag tcgtcggcct gcacgttggc gcaatgcacc atgcggcacg gcgtgatctc
     3601 gggccggctg cgcgccgaat gcggcgactt cgacatgctc gacgccttcc cgccgctcaa
     3661 ggccctgagg gcgccgcgat gatcaacaac ccgcccgccg gcaccaagcc gcccagccag
     3721 gaagggctgt tgctcgacta cctggcgcgc ctggaacgcc accgcaagga ccgccgcgcc
     3781 gcccacatcc acctgtcggg cctgcagcag gtcaaccgcc gcgaccacca tctgcgcatc
     3841 gccgccaaca ccttcgagcc gctggtcaag ctgatgcagg cgcaggtgtt cagcctgggc
     3901 aattccgatt tgatggtggt ctacaaggcg caggcacagg aagaggtgga atcctccatc
     3961 gtcaagctgc gcttcctgtt ctcggacgac cccctggtta tcgaggacgc cgccggccgc
     4021 atgggcacct tctgcacctg gtacgacctc gaccgcgaat acgaggtgct ggtcaccctg
     4081 gcgcagaaga tgcagcagga cgaggccgcc aagcgcaagg ccgagctgga gcgccagggc
     4141 ctcgacttcc gcgccgagca gaaccggccc aagggcacgc ccttcacccc ggaattgctg
     4201 gcccgcaccg agggcgcctt gggccaggcc gacctcgcca atctgatgcg ccgccaggcg
     4261 gtgtgcgcca tggtcggcaa ggcgccgcca cagccggtgt tccacgagct gttcatctcc
     4321 atcgccgatc tgcgccagac gctgatgccc agcgtcaaca tgaactccag cccgtggctg
     4381 ttccagcaac tgaccgaaac cctggaccgc cgcgtgctgt cgctgctcaa caagcatgac
     4441 gaccgcacgc tggaaggcga catcagcatc aacctcaacg tctcgaccat cctgtcgccg
     4501 gaattcctgg tgttcgacga caacgtcaag gcgggcatgc gcggcaccat cgtgctggaa
     4561 ctgcagaagg tcgacatctt cgccgatctg ggcgcctatc tgttcgcccg cgacttcgcc
     4621 cacgaccgcg gctaccgcat ctgcgtcgac ggcctgacct attcccagtt gcccttcgtc
     4681 gaccgcgagc gcctgggcgc cgatctgatc aagctggtgt gggacccgtc gctggcccat
     4741 gacaccgagc agaaatccga tgcgttgaag cgcatcggcg tcacccgcat catcctgtgc
     4801 cgctgcgaca cccccagcgc catcgaatgg ggccattccg tcggcatcac cctgttccag
     4861 ggccgccacg tcgaatccat gctggcgaac gacacccgcc gccgcggcat cgcccggcgc
     4921 cgggtgtagc gcccgcgcgt cgccttgggg tggcaagcat cgaaacagcc cccatatcca
     4981 ggcgatgact gaaccagcca ttcaggttga gtccctcgcc aagtcctttg gggatttggt
     5041 tgcggtggac catgtggact tcaccgtcgc ccgtgggtcg gtgacggcgc tgctgggcgg
     5101 caacggtgcc ggcaagacca ccaccatttc catgctgctg ggcctgctgc tgcccagtgc
     5161 cggcaccatc cgggtgctgg gcgaggacat ggtgcgccac cgctaccggg tgctgccgcg
     5221 cctcaacttc tccagcccct atgtggaact gccgctgcgc ctgtcggtgg ccgagaattt
     5281 gacggtctac ggccaccttt acggcgtgcc cgacctcaag cgccgcatcc gcgacctggc
     5341 cgaggaactc gatctcggca agctgctcaa gcgccccacc ggcaagctgt cggccggcca
     5401 gaagacccgc gtggcgttgg ccaaggcgtt gctcaacgaa ccggaattgc tgctgctcga
     5461 cgagccgacc gcctcgctcg accccgacac cgccgactgg gtgcgcggct atttcgattc
     5521 ctaccggcgc cggacgggcg ccaccatcct gctggcgtcg cacaacatga
//
LOCUS       DATIKR010000735         2882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_72076, whole genome shotgun sequence.
ACCESSION   DATIKR010000735 DATIKR010000000
VERSION     DATIKR010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72076"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VLL76_11610"
     CDS             <1..274
                     /locus_tag="VLL76_11610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30200.1"
                     /translation="KLKLIRSNVNDVDYGALLAPYDVVIVFNRNSFDKKTTEQTLNKV
                     KEACQGKTFFYVYSNPVFEASFAGHECVFAMQGWHKGWNTKVFKVS"
     gene            483..>2882
                     /gene="flgK"
                     /locus_tag="VLL76_11615"
     CDS             483..>2882
                     /gene="flgK"
                     /locus_tag="VLL76_11615"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HSV30201.1"
                     /translation="MSLTLGLNTAISGLMTNQRQLDVIAQNVSNVNTPGYTRKVLNQE
                     SRVLAGYGAGVQTGSITRSVDEGLLKHLRAEQGKLADVKVVDQYLERLGQQFGTPADN
                     TSISHVINEFAENLEALATQVGKQTSYLGAVRAAQDVTDKIQRMSAEISQLRADADVR
                     IADVVTQINDKIDEIHTLNNLIIKNNATGAGTEDLVDKRDAALSELSEFIDIKYYNLA
                     DGGIAVYTSGGMLMVDSTPQYLSHTAMTSVDATATKADGTLDGITIGGIDITNDIRSG
                     ELKGLITIRDDQLTNFQAGLDRLASELMTRINAAHNRGTSHPDPMSSLTGTRRFADQD
                     NITQQIRLAGTSGDTMLTVLDANGEQVAVENLDEIMTDAGHPSRGWWTVNQVTTAVQN
                     WLQANGAPAATVGLNSDGQLAIDLKNASYTMAFRDQVDGNAGSDTADVTIEFDMDGDG
                     SAEQSVEGFSSFFGLRDLFTTGKPNWLFESSIQPGSITTTVNRNIRLYDQSGQVGSNI
                     TIPAGYSLEQAAALINKHATSVDSMIKDAAYTIPAPSAGKTLTLSLPSGTVGTYTAVA
                     GDTLADIATAITAMGLTATVVDDQGGERVRVTNSSGVEITPSGDLASELGFEARQLVK
                     ASVVPEGSGYRLRMLHSEGGEMFIGADVDGGGHSFLTDFGIGPGAAGKSATVQVNQTY
                     VEAPYLISRGSPQYDATRNIYYTPEGDNTTALQLAAAAADKGMVKQSGNLGAGSFNLT
                     EYGSALISLTAREHGVVKGQLDYQSKLTSSIEFQHQNLAGVNVDEEVANLITYQQAYG
                     AS"
BASE COUNT          602 a          964 c          892 g          424 t
ORIGIN      
        1 caagctcaag ctgatccgga gcaacgtcaa cgacgtcgat tatggcgcgt tgctggcgcc
       61 gtatgacgtc gtcatcgtct tcaatcgcaa ttccttcgac aagaagacga ccgagcagac
      121 gctgaacaag gtcaaagagg cctgtcaggg caagacgttc ttctacgttt acagcaaccc
      181 ggtgttcgag gcttcgtttg ccggccatga atgcgtcttc gcgatgcagg gatggcacaa
      241 gggctggaac accaaggtgt tcaaggtctc ctgatcgggg acgtggggca ggaattgccg
      301 gataggcagt tcttgcccgg cagggggcgg tgcctcaacc ccttgcccgc cgcgcaaagc
      361 gccggtttcc aagggttcct ctctggcatc ggacttgcac ctccgcttac gggtcagtgt
      421 gcgcgggatc agaagatcgg cgccggaccc aaggcccggg aaggtgctcc gcggaggatc
      481 agatgtctct taccctcgga ttgaacacgg cgatcagcgg cttgatgacc aaccagcgtc
      541 agctggacgt catcgcccag aacgtgtcga acgtgaacac gcccggctac acccgcaagg
      601 tgctgaacca ggaatcgcgc gtgctggccg gctacggcgc cggcgtgcag accgggtcga
      661 tcacgcggtc ggtggacgag gggctgctca agcacctgcg cgcggagcag ggcaagctgg
      721 ccgacgtcaa ggtggtcgat caatatctgg agcggctggg gcagcaattc ggcacgcccg
      781 ccgacaacac ctcgatcagc cacgtcatca acgaattcgc cgaaaacctc gaggccttgg
      841 ccacccaggt gggcaagcag acgtcctatc ttggcgcggt gcgcgctgcc caggacgtca
      901 ccgacaagat ccagcgcatg agcgccgaaa tctcgcagtt gcgcgccgac gccgacgtcc
      961 gcatcgccga cgtcgtcacc cagatcaacg acaagatcga cgaaatccac accctcaaca
     1021 acctgatcat caagaacaac gccaccggcg caggcaccga ggatctggtg gacaagcgcg
     1081 acgccgcgct gagcgagctg tcggaattca tcgacatcaa gtattacaac ctggctgacg
     1141 gcggcatcgc ggtctacacc tcgggcggca tgctgatggt ggacagcacg ccccagtatc
     1201 tcagccacac cgccatgacc agcgtcgacg ccaccgccac caaggccgac ggcacgctcg
     1261 acggcatcac gatcggcgga atcgacatca ccaacgacat ccgctcgggc gagctcaagg
     1321 gcctgatcac gatccgcgac gaccagttga cgaatttcca ggccgggctc gaccgcctgg
     1381 ccagcgagtt gatgacgcgc atcaacgcgg cccacaaccg cggcaccagc catcccgatc
     1441 ccatgagcag cctgaccggc acgcgccggt tcgccgacca ggacaacatc acccagcaga
     1501 tccggctggc cggcaccagc ggcgacacca tgctgaccgt gctcgacgcc aacggcgagc
     1561 aggtggcggt ggagaacctc gacgagatca tgaccgacgc cggccatccg tcgcgcggct
     1621 ggtggacggt caaccaggtg accacggcgg tgcagaactg gctgcaggcc aacggcgcgc
     1681 cggccgccac cgtggggctg aattcggacg ggcagctcgc catcgacctg aagaacgcgt
     1741 cctacaccat ggcattccgc gaccaggtgg acggcaacgc cggttccgac acggccgacg
     1801 tcaccatcga attcgacatg gacggcgacg gcagcgccga gcaatcggtc gagggcttct
     1861 ccagcttctt cggcctgcgc gacctgttca ccaccggcaa gcccaattgg ctgttcgaaa
     1921 gctccatcca gcccggctca atcaccacca cggtcaaccg caacatccgc ctgtacgacc
     1981 agagcggcca ggtcggatcg aacatcacga tccccgccgg ctattcactg gagcaggcgg
     2041 cggcgctgat caacaagcac gcgacctcgg tcgattcgat gatcaaggac gccgcctata
     2101 ccattcccgc gccgagcgcg ggcaagaccc tgacattgtc gctgcccagc ggcacggtcg
     2161 gtacgtacac ggccgtcgcc ggtgacaccc tggcggatat cgccaccgcc atcaccgcca
     2221 tgggcctgac cgcgacggtg gtggacgacc agggcggcga gcgcgtgcgt gtcaccaaca
     2281 gttcgggcgt cgaaatcacg cccagcggcg atctggccag cgaactcggc ttcgaggcgc
     2341 gtcagttggt caaggcgagc gtggtgccgg aaggctcggg ctaccgcctg cggatgctgc
     2401 acagcgaggg cggcgaaatg ttcatcggcg ccgacgtgga cggcggcggc cacagtttcc
     2461 tgaccgattt cggcatcgga ccgggtgccg ccggcaaatc ggcgaccgtc caggtcaacc
     2521 agacctacgt ggaagcgccc tatctaatct cgcgcgggtc gccgcaatac gacgccaccc
     2581 gcaacatcta ttacaccccc gagggcgaca acacgaccgc gctgcaactg gccgcggcgg
     2641 ccgccgacaa ggggatggtc aagcaatcgg gcaacctcgg cgccggctcg ttcaacctga
     2701 cggagtacgg ctcggccctg atcagcctga ccgcgcgcga gcacggtgtc gtcaaggggc
     2761 agttggacta ccagtccaag ctcaccagca gcatcgagtt ccagcaccag aacctggcgg
     2821 gggtcaacgt ggacgaggaa gtggcgaacc tgataaccta tcagcaagcc tatggagcgt
     2881 cg
//
LOCUS       DATIKR010000736         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_47898, whole genome shotgun sequence.
ACCESSION   DATIKR010000736 DATIKR010000000
VERSION     DATIKR010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47898"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VLL76_11620"
     CDS             <1..718
                     /locus_tag="VLL76_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitrogenase component 1"
                     /protein_id="HSV30202.1"
                     /translation="SITGDARYRDVAACHTARANMVLCSQALITLARKMKESYGIPYY
                     EGSFYGISDTSEALRNIVRMLVERGADPTLTERTEALIAEEEAKAWAALERFKPRLAG
                     KKVLLYTGGVKSWSVIQALQEVGMEVVGSSVRKATEADKLRALERLGGDEDKLADAIT
                     PRDMYAMFKDGRADMMLSGGRSQFVALKAKTPWIDINQERHHGYACYDGMIEMVRQID
                     LSINNPIWDQVRKPAPWEEA"
     gene            721..>1653
                     /gene="nifN"
                     /locus_tag="VLL76_11625"
     CDS             721..>1653
                     /gene="nifN"
                     /locus_tag="VLL76_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_process: GO:0009399 - nitrogen fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogenase iron-molybdenum cofactor
                     biosynthesis protein NifN"
                     /protein_id="HSV30203.1"
                     /translation="MALVINHNKALSTSPLKTSAPLGAALAFMGMDGSLPLFHGSQGC
                     TAFALVMMVRHFREAIPLQTTAMNEISTILGGADQVEQALLNIAKRAKPKVIGLVSTA
                     LTETRGEDLGGDLKAIMAKNKDLAGTAVIHVSAPDFDGSLETGWSKAVTAMVTALAQP
                     ANGHAPLKRVNILPGVHLTPGDIEALKEIVEDFGLEPVVLPDLSGSLDGRVPDAYVPT
                     TLGGTTLEQAKGMGRAMLTLAIGEHMHWAAEALHEKTGVPYVIFDRLTGLEAVDKLMV
                     SLSTAAGIPVPAKYRRQRSQLVDAMLDGHFFFGGR"
BASE COUNT          294 a          593 c          534 g          232 t
ORIGIN      
        1 ctcgatcacc ggcgacgccc gctaccgcga cgtcgcggcc tgccacacgg cgcgggccaa
       61 catggtgctg tgcagccagg cgctgatcac gctggcgcgc aagatgaagg aaagctacgg
      121 catcccctat tacgagggat cgttctacgg catctccgac acctccgagg ccctgcgcaa
      181 catcgtccgc atgctggtcg agcgcggcgc cgaccccacc ctgaccgagc gcaccgaggc
      241 gctgatcgcc gaggaggagg ccaaggcctg ggcggcgctg gaacggttca agccgcgtct
      301 cgcgggcaag aaggtgctgc tctacaccgg cggcgtcaaa agctggtcgg tcatccaggc
      361 gctgcaggaa gtgggcatgg aggttgtcgg ctcgtcggtg cgcaaggcga ccgaggccga
      421 caagctgcgc gccctggaac gcctgggcgg cgacgaggac aagctggccg acgccatcac
      481 gccccgcgac atgtacgcca tgttcaagga cggccgcgcc gacatgatgc tgtcgggcgg
      541 gcgctcgcaa ttcgtggcgc tcaaggccaa gacgccgtgg atcgacatca accaggaacg
      601 ccaccacggc tacgcctgct acgacggcat gatcgagatg gtccgccaga tcgacctgtc
      661 catcaacaac cccatctggg accaggtgcg caagccggcg ccctgggagg aggcctgacc
      721 atggcgctcg tcatcaacca caacaaggcc ctgtccacca gcccgctgaa gaccagcgcg
      781 ccgctgggcg ccgccctcgc cttcatgggc atggacggca gcctgcccct gttccacggc
      841 agccagggct gcaccgcctt cgccctggtc atgatggtcc gccatttccg cgaggccatc
      901 ccgctgcaga ccacggccat gaacgaaatc tccaccatcc tgggcggcgc cgaccaggtc
      961 gagcaggcgc tgctcaacat cgccaagcgc gccaagccca aggtgatcgg gctggtgtca
     1021 accgcgttga cggagacgcg cggcgaggat ctcggcggcg acctcaaggc catcatggcc
     1081 aagaacaagg atctggcggg caccgccgtg atccacgtct cggcccccga tttcgacggc
     1141 tcgctggaaa ccggctggtc caaggcggtc accgccatgg tcacggcgct ggcccagccg
     1201 gccaacggcc acgcgccgct caagcgcgtc aacatcctgc cgggcgtcca cttgaccccc
     1261 ggcgacatcg aggcgctgaa ggaaatcgtc gaggatttcg ggctggagcc ggtggttctg
     1321 cccgacctgt ccggttcgct cgacggccgc gtccccgatg cctacgtccc caccaccctg
     1381 ggcggcacca cgctggagca ggccaagggc atgggccgcg ccatgctgac gctggccatc
     1441 ggcgagcaca tgcactgggc ggccgaggcg ctgcacgaaa agaccggcgt gccctatgtc
     1501 atcttcgacc gtctgaccgg cctcgaggcc gtggacaagc tgatggtcag cctgtccacc
     1561 gccgccggca tcccggtgcc ggccaagtac cgccgccagc gctcgcaact ggtcgacgcc
     1621 atgctggacg gccacttctt cttcggcggc cgg
//
LOCUS       DATIKR010000737         7040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_192104, whole genome shotgun sequence.
ACCESSION   DATIKR010000737 DATIKR010000000
VERSION     DATIKR010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 7040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7040
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192104"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VLL76_11630"
     CDS             <1..211
                     /locus_tag="VLL76_11630"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV30204.1"
                     /translation="GLPPDSTAVSMVMSTEVQTCHPDDSLEDIAAAMGLRQIRRMPVI
                     GDDGALVGIVTLADIERLERGEQPA"
     gene            208..1971
                     /locus_tag="VLL76_11635"
     CDS             208..1971
                     /locus_tag="VLL76_11635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSV30205.1"
                     /translation="MTTDQATIFVILGLALALFVWDRVRYDVVALLALLATVMTGLVD
                     GDQAFSGFSDSAVVTVAAVLVISTALRNAGFVEWVMGRLGPILDRPALQVVALTGIVA
                     ALSAFMNNVGALAVALPVGMQLAKRSGRPVGDLLMPAAFGSLLGGLITLIGTPPNLLI
                     SAVRKDITGQGFAMFDFAPVGLAMTALGLVYLSVGWRLIPRGRSGASDEPFAIDDSVA
                     EVMVPEGAPLVGKRVSELEAATHGEGAVTAIIREHFRRYVPAGHWTIFAGDVLVIECD
                     PQVLKALVDQFRLQVVGSKELPETAPDDMTIVEAVVSPGSRLVGCSPVDLQLRDRYRV
                     NLLAVGRRARRTGVRLKRVKFAVGDVAVLQGSSAMMPETLSRLGLLPLARRDLHIGRP
                     RKAILTAIFFLAAILATTFDVVPAAIAFTAAVVALVLVNAVTLTEAYGAIAWPVIVLL
                     GAMIPVSEALRTTGATDLVAGWLVAVGGHLPPMLSLGLILAVTMAITPILNNAATVLV
                     MAPIAAGFAARMGLSLDPFFMAVAVGASCDFLTPIGHQSNTLVMGPGGYRFSDYWRVG
                     LPLTIMILLAGPPMILAVWPV"
     gene            complement(1968..2723)
                     /locus_tag="VLL76_11640"
     CDS             complement(1968..2723)
                     /locus_tag="VLL76_11640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV30206.1"
                     /translation="MLVRLFAVVLLALLSAMPVGAAERDIVVGVEELDYYPLYSVWDG
                     EYVGTAREILDSFAKSKGYRITYRPLPIKRLYAELVSGGIDLKFPDNPYWAADVKAGA
                     KVVYSQPVIAYVDGVMVPPASVGNGADGIKVLGTVAGFTPFAWLDRIKANQTALRENP
                     KLELLLKQAAVKRVDGAYASVAVANHYLEHVMAMPGALVFDPSLPHSRDFYMASSVKQ
                     PQLVAEFDAWLAANQPRVADIKRRFGAEKGVTD"
     gene            complement(2770..3357)
                     /locus_tag="VLL76_11645"
     CDS             complement(2770..3357)
                     /locus_tag="VLL76_11645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSV30207.1"
                     /translation="MPTIILVRHGETHFNREKRVQGHVDSPLTLKGIEQAKAYGRTIH
                     ELIGDGEGWRIVSSPLGRCTQTTGLICEIAGLAYSRVRIDDRIKEVGTGALSGQLKSD
                     LPPEFVAGGTGTDAWYFRCPGGESHADMVARLSPFLAEIEPGEKVIVVSHGVAGKVLR
                     GLYCGLDPNEALASDTPQDAIYRLSGGHLQRLVCG"
     gene            complement(3524..5920)
                     /gene="pheT"
                     /locus_tag="VLL76_11650"
     CDS             complement(3524..5920)
                     /gene="pheT"
                     /locus_tag="VLL76_11650"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSV30208.1"
                     /translation="MKFTLSWLKQHLETDATLDEIGARLTMLGLEVEDIQDPAKDLGG
                     FTIAHVLEAEKHPDADRLRVCKVDTGSEVIQVVCGAPNARAGLKVILAQPGTFIPVTG
                     DVLKKGKVRGVESQGMMCSWRELKLGEDHEGIAELAADAPVGKKLVEVMSFDPMIEIS
                     ITPNRADCLGVRGIARDLAASGMGTLKPLNTDPVAGKFASPIGVKLDFAPADKPACPY
                     FVGRLIRGVKNGESPAWLKDRLTAIGLRPISALVDITNYVTYDLARPLHVFDAAKVKG
                     TISARLAREGETLLALNGKEYALSADMTVIADEAGPEALAGIIGGEHSGCTEATTDVF
                     LEAAYFDPIRTAATGRKLDILSDARFRFERGVDPAFVKTAAEIATRLILELCGGEASE
                     LVIVGEEPEWRNSIVMRPARVRELGGVEVAKEKQERILRALGCEVAEHADGLLVVPPS
                     WRGDVAAEHDLVEEVIRINGYDELPMVPLPRPSMPKPLLTPAQRRASWVRRQLASRGL
                     VETVTWSFLPSAQAKLFGGGAPEMHLANPISSDLDAMRPSVLPNLVAASGRNADRGFK
                     DIGLFEIGPQFDGPEPGQQRPVAAGIRAGRAVPRHWSERTRSVDVFDAKADALAALAA
                     AGANTDSFQVVAEAPAWYHPGRSGCFKLGNKAVAFFGELHPGVLNTMDVKGPVVGFEV
                     FLDAIPPQKAKATKAKPALKLSPFQPLERDFAFVLDAGIAADAVVRAARNSDKALITE
                     VVAFDLYEGPNVGEGKKSIAITATLQPTEKTLTDDEIEAVGRKIVDAVVKATGGTLRS
                     "
     gene            complement(5917..6993)
                     /gene="pheS"
                     /locus_tag="VLL76_11655"
     CDS             complement(5917..6993)
                     /gene="pheS"
                     /locus_tag="VLL76_11655"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HSV30209.1"
                     /translation="MDELDKIRSEAMSAVAQAASLEQLDAARVALLGKKGSISALMAS
                     LGKMSPDERKEAGARLNQLKDEVADAIAAAKAGLETKALDERLARERVDVTLPVRPEA
                     QGRIHPISQVMDEMVAIFAQMGFEVAEGPDIEDDFHNFTALNIPAEHPARQMHDTFYF
                     GEKDDGSRHLLRTHTSPVQIRTMLANKPPIRIIAPGRTYRCDSDMTHTPMFHQIEALV
                     IDRTTHMGHLKGTLIEFVRTFFEIDDVPVRFRPSFFPFTEPSAEIDIGCSREGGELKI
                     GPGKGWLEIGGSGMVHPNVLRACGIDPDQYQGFAFGMGVERMAMLKYGIPDLRTFFDS
                     DMRWLKHYGFLPLDVPTLSGGLTR"
BASE COUNT         1018 a         2321 c         2505 g         1196 t
ORIGIN      
        1 aggcctgccg ccagacagca cggcggtgtc gatggtgatg tccaccgagg tccagacctg
       61 ccaccccgac gacagcctgg aagacatcgc cgccgccatg ggactgcgcc agattcgccg
      121 catgccggtg atcggcgatg acggcgcgct ggtcggcatc gtcaccctgg ccgacatcga
      181 gcggctggag cggggcgagc agccggcatg acgaccgacc aggcgacgat cttcgtcatc
      241 ctgggcctgg cgctggcgtt gttcgtgtgg gaccgggttc gctatgacgt ggtcgcgctg
      301 ctggcgctgc tggcgacggt gatgaccggc ctggtggacg gtgaccaggc gttctcgggc
      361 ttttctgatt cggcggtggt gacggtggcg gcggtgctgg tcatcagcac ggcgctcagg
      421 aacgccggct tcgtcgaatg ggtgatgggg cggttggggc cgatcctcga tcgcccggcg
      481 ctgcaggtgg tggcgctgac cggcatcgtc gcggcgctgt cggccttcat gaacaatgtc
      541 ggcgccctgg cggtggcgct gccggtgggc atgcaactgg ccaagcgcag cggccggccg
      601 gtgggcgatc tgctgatgcc ggcggcgttc ggctcgctgc tgggcggcct gatcaccctg
      661 atcggcacgc cgcccaacct gctgatctcg gccgtgcgca aggacatcac cggccagggc
      721 ttcgccatgt tcgacttcgc gccggtgggc ttggcgatga cggcgctggg gctggtctac
      781 ctgtcggtgg gctggcggct gatcccgcgc gggcgcagcg gagcctcgga cgagccgttc
      841 gccatcgacg attcggtggc cgaggtcatg gtgcccgagg gggctcccct ggtcggcaag
      901 cgcgtgtccg aactggaggc cgcaacccac ggcgagggcg ccgtcaccgc catcatccgc
      961 gagcatttcc gccgctacgt cccggccggc cattggacca tcttcgccgg cgacgtgctg
     1021 gtgatcgaat gcgacccgca ggtgctgaag gcgttggtcg accagttccg cctgcaggtg
     1081 gtgggttcga aggagctccc cgaaaccgcc cccgacgaca tgaccatcgt cgaggcggtg
     1141 gtcagcccgg gatcgcggct ggtgggctgc tcgccggtgg acctgcaatt gcgcgaccgc
     1201 taccgcgtca acctgctggc ggtggggcgg cgggcgcggc gcaccggcgt gcggctgaag
     1261 cgggtcaagt tcgcggtggg cgacgtcgcc gtgctgcaag ggtcgtccgc catgatgccc
     1321 gagacgctgt cgcgcctggg cctgctgccg ctggcgcgcc gcgacctgca catcggccgg
     1381 ccgcgcaagg cgatcctgac ggccattttc ttcctggcgg cgattctggc gaccaccttc
     1441 gacgtcgtgc ccgccgccat cgccttcacg gcggcggtgg tggcgctggt gctggtcaac
     1501 gccgtcaccc tgaccgaggc ctatggcgcc atcgcctggc cggtcatcgt gctgctgggc
     1561 gccatgatcc cggtgtccga ggcgctgcgc acgaccgggg ccaccgacct ggtggcggga
     1621 tggctggtgg cggtgggcgg ccacctgccg cccatgctgt cgctggggct gatcctggcg
     1681 gtgaccatgg cgatcactcc catcctcaac aacgccgcca ccgtgctggt gatggccccc
     1741 atcgccgccg gcttcgccgc ccgcatgggg ctgtcgctcg acccgttctt catggcggtg
     1801 gcggtcggcg cgtcgtgcga cttcctcacc cccatcggcc accagtcgaa cacgctggtg
     1861 atggggccgg gcggctatcg cttttccgat tactggcggg tcgggctgcc gctgacgatc
     1921 atgatcctgc tggcggggcc gcccatgatc ctggcggtgt ggccggttta atccgtaacg
     1981 cccttctcgg cgccgaagcg gcgtttgatg tcggcgacgc ggggctggtt ggcggccagc
     2041 caggcatcga actcggccac caattgcggc tgcttgacgc tggacgccat gtagaagtcg
     2101 cgggaatggg gcagggaggg gtcgaacacc agggcgcccg gcatcgccat cacatgttcg
     2161 agatagtggt tggcaacggc gacgctggca taggcgccgt ccacccgctt gaccgccgcc
     2221 tgcttcagca gcagttccag tttggggttc tcgcgcaggg ccgtctggtt ggccttgatg
     2281 cggtcgagcc aggcgaaggg ggtgaagccg gccaccgtcc ccagcacctt gatgccgtca
     2341 gccccgttgc cgacagaagc cggcggcacc atgacgccgt ccacataggc gatcaccggc
     2401 tggctataaa cgactttggc gcctgccttg acgtcggcgg cccaatacgg attgtcgggg
     2461 aatttgaggt cgatgccgcc gctgaccagt tcggcataca ggcgtttgat cggcagcggg
     2521 cgataggtga tgcgatagcc cttggacttg gcgaaagaat caaggatttc gcgggcggtg
     2581 ccgacatact cgccatccca caccgaatag agcgggtaat agtcgagttc ctcgaccccc
     2641 accacgatgt cgcgctcggc ggcgccgacg ggcatggcgg acagcagcgc cagcaacacc
     2701 acggcgaaca atcggaccag cattccccgc ccccatgatt atcgtgccgc cagcttacca
     2761 gtttgcgcgt cagccgcaca ccagccgctg caggtggccg cccgacaacc ggtagatggc
     2821 gtcctggggg gtgtccgacg ccagtgcctc gttggggtcc agcccgcaat agaggccgcg
     2881 caggaccttg ccggcgacgc cgtggctgac cacgatcacc ttttcgcccg gctcgatctc
     2941 ggccaggaag ggcgacagcc gcgccaccat gtcggcatgg ctctcgccgc cggggcagcg
     3001 gaagtaccag gcgtcggtgc cggtgccgcc cgccacgaat tccggcggca ggtcggactt
     3061 caactggccg gacagggcgc cggtgccgac ctccttgatg cggtcgtcga tccgcacgcg
     3121 gctgtaggcc agcccggcga tttcgcagat cagcccggtg gtctgggtgc agcgccccag
     3181 cgggctggac acgatccgcc agccctcgcc gtcgccgatc agctcgtgga tggtacggcc
     3241 ataggccttg gcctgctcga tgcccttcag cgtcaggggc gagtccacgt ggccctgcac
     3301 ccgcttctcg cggttgaagt gggtttcacc gtggcggacg aggatgatgg tcggcatggg
     3361 gagttccata aatgccctct cccgcctgcg ggagagggag ggacccagcc aaaggctggg
     3421 agggtgaggg cgttacggac acggtgtctt cgcatcgccc tcaccctccc accgcctgcg
     3481 gcggcgggct cctccctctc ccgtgggacg ggagagggga atatcaagac cgcagcgtgc
     3541 cgccggtggc cttgaccacg gcgtcgacga tcttcctgcc cacggcttcg atctcgtcgt
     3601 cggtcagggt cttttcggtc ggctgcaggg tggcggtgat ggcgatggac ttcttgccct
     3661 cgccgacgtt cgggccttcg tacaggtcga acgccaccac ctcggtgatc agcgccttgt
     3721 cgctgttgcg ggcggcccgc accaccgcgt cggcggcgat gccggcatcc agcacgaagg
     3781 cgaagtcgcg ttccagcggc tggaacggcg acagcttcag cgccggcttg gccttggtcg
     3841 ccttggcctt ctgcggcggg atggcgtcga ggaacacctc gaatccgacc accggaccct
     3901 tgacgtccat ggtgttcaac acgccggggt gcaattcgcc gaagaacgcc accgccttgt
     3961 tgcccagctt gaagcagccc gagcggccgg ggtggtacca ggccggagcc tcggcaacca
     4021 cctggaacga gtcggtgttg gcgccggcgg cggccaaagc ggccagggcg tcggccttgg
     4081 cgtcgaacac gtccaccgag cgggtccttt ccgaccagtg gcgcggcacg gcgcggccgg
     4141 cacggatgcc ggcggcgacg gggcgctgct ggcccggctc gggaccgtcg aattgcgggc
     4201 cgatctcgaa caggccgatg tccttgaaac cacggtcggc attgcggccc gacgcggcca
     4261 ccaggttggg cagcacgctg ggacgcatgg cgtcgaggtc ggacgagatc gggttggcga
     4321 ggtgcatctc gggcgcgccg ccgccgaaca gcttggcctg ggccgacggc aggaacgacc
     4381 aggtgacggt ctcgaccagc ccgcgcgacg ccaactggcg acgcacccac gacgcccggc
     4441 gctgggccgg ggtcaacagc ggcttgggca tggacgggcg gggcagcggc accatcggca
     4501 gttcgtcata gccgttgatg cggatgacct cttccaccag atcgtgctcg gcggcgacgt
     4561 cgccgcgcca cgacggcggc accaccaaga ggccgtccgc atgttccgcc acctcgcagc
     4621 ccagggcgcg caggatgcgc tcctgcttct ccttggcgac ctcgacgccg cccagttcgc
     4681 gcacgcgcgc ggggcgcatg acgatggagt tgcgccattc cggctcctcg ccaacgatca
     4741 ccagctccga cgcctcgccg ccgcacagct ccaggatcag gcgggtggcg atctcggcgg
     4801 cggtcttgac gaaagccgga tcgacgccgc gctcgaagcg gaagcgggca tccgacagga
     4861 tgtccagctt gcggccggtg gcggcggtgc ggatgggatc gaaataggcg gcttccagga
     4921 acacgtcggt ggtggcctcg gtgcaaccgg aatgctcgcc gccgatgatg ccggccaggg
     4981 cttccggccc ggcctcgtcg gcgatcaccg tcatgtcggc cgatagggcg tattccttgc
     5041 cgttgagcgc cagcagggtc tcgccctcac gcgccagacg ggccgagatg gtgcccttga
     5101 ccttggcggc gtcgaacacg tgcagcggcc gcgccaggtc gtaggtgacg tagttggtga
     5161 tgtccaccag ggccgagatg gggcgcaggc cgatggcggt caggcggtcc ttcagccagg
     5221 ccgggctttc gccgttcttg acgccccgga tcaggcggcc gacgaaatac gggcaggccg
     5281 gcttgtcggc gggggcgaag tccagcttga cgccgatggg gctggcgaac ttgccggcaa
     5341 ccgggtcggt gttcagcggc ttgagcgttc ccatgcccga ggccgccagg tcgcgggcga
     5401 tgccgcgcac gcccaggcag tcggcgcggt tgggggtgat ggagatctcg atcatggggt
     5461 cgaagctcat cacctcgacc agcttcttgc cgacgggggc gtcggcggcc agctcggcga
     5521 tgccctcgtg gtcctcgccc agcttcagct cgcgccacga gcacatcatg ccctggctct
     5581 cgacgccgcg caccttgccc ttcttcagca cgtcgccagt gacgggaatg aaggtgccgg
     5641 gctgggccag gatgaccttg aggccggcgc gcgcgttggg ggcgccgcac accacctgga
     5701 tgacctccga gccggtgtcg accttgcaca cccgcaggcg gtcggcgtcg gggtgcttct
     5761 cggcctccag cacatgggcg atggtgaaac cgcccaggtc cttggcgggg tcctggatgt
     5821 cctcgacctc aaggccgagc atggtcaggc gggcgccgat ctcgtcgaga gtggcgtcgg
     5881 tctccaggtg ctgcttgagc caggagagag tgaacttcat cgggtcagcc ctccggacag
     5941 ggtcggcacg tcgagcggca ggaagccgta atgcttgagc cagcgcatgt cgctgtcgaa
     6001 gaacgtgcgc aaatcgggga tgccgtattt cagcatcgcc atgcgctcga cgcccatgcc
     6061 gaaggcgaag ccctggtact ggtcggggtc gatgccgcag gcgcgcagca cgttgggatg
     6121 caccatgccc gagccgccga tctccagcca acccttgccg gggccgatct tcaactcgcc
     6181 accctcgcgc gagcagccga tgtcgatctc ggccgacggc tcggtgaagg ggaagaagct
     6241 gggacggaag cgcaccggga cgtcgtcgat ctcgaagaag gtgcgcacga actcgatcag
     6301 cgtgcccttc aggtggccca tgtgggtggt gcggtcgatg accagcgcct cgatctggtg
     6361 gaacatgggc gtgtgcgtca tgtccgaatc gcagcgatag gtgcggccgg gggcgatgat
     6421 gcggatgggc ggcttgttgg ccagcatggt gcggatctgc accgggctgg tgtgggtgcg
     6481 cagcaggtgg cgcgagccgt cgtccttctc gccgaaatag aaggtgtcgt gcatctgccg
     6541 ggcggggtgc tcggccggga tgttcagtgc ggtgaaattg tggaagtcgt cctcgatatc
     6601 cggcccttcc gctacctcga agcccatctg ggcgaagatg gcgaccatct cgtccatgac
     6661 ctggctgatg ggatggatgc ggccttgggc ttcggggcgc accggcagcg tcacgtcgac
     6721 gcgctcgcgc gccaggcgct cgtccagcgc cttggtttcc aggccggcct tggcggcggc
     6781 gatggcgtcg gccacctcgt ccttgagctg gttcaggcgg gcgccggctt ccttgcgctc
     6841 gtccgggctc atcttgccca acgacgccat cagcgccgag atcgagccct tcttgcccaa
     6901 aagcgccacg cgggcggcgt ccagttgctc caggcttgca gcctgggcga cggcgctcat
     6961 cgcctcggaa cggatcttgt cgagttcgtc cattttgttc cccgtcctct tttcgtcatc
     7021 cccgcgaagg cggggatcca
//
LOCUS       DATIKR010000738         3655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_96196, whole genome shotgun sequence.
ACCESSION   DATIKR010000738 DATIKR010000000
VERSION     DATIKR010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96196"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3324)
                     /locus_tag="VLL76_11660"
     CDS             complement(<1..3324)
                     /locus_tag="VLL76_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSV30210.1"
                     /translation="MAWQFWIDRGGTFTDIVARRPDGGLATAKLLSENPEHYADAALA
                     GIRRLLGLAPDAPIPPEQVAAVKMGTTVATNALLERKGDRTLLAVTAGFADLLRIGTQ
                     NRPDLFARAIQLPEMLYERVAEIPERVTAEGEVLVELDLKLAADRLLTAYEDGIRSVA
                     VVLLHSYRWPEHERALGKLARDIGFTQVSLSHEASPLMKVVGRGDTTVVDAYLSPILR
                     RYVDRVAGELSGSRLMFMQSSGGLTDARRFQGKDAILSGPAGGVVGAVKTAAMAGFDR
                     IIGFDMGGTSTDVCHYDGTYERSFDTVVAGVRMRAPMMRIHTVAAGGGSVLEYDGARF
                     RVGPQSAGANPGPTCYRRGGPLTVTDCNVMVGKLQPAFFPKVFGPDADQPLDAEAVAA
                     RFAELATLTGRAPEQVAEGFLSIAVLNMANAIKQVSVQRGYDVTRYTLVSFGGAGGQH
                     ACLVADALGMDTVFLHPLAGVLSAYGMGLADLAVLKERSLEALLDDKAMAQVNRAFAD
                     LEAEGRSELERQGVDRADMASSRRVFLKYQGSDTALEIEAGDRTQLAERFEAAHRGRY
                     GFVMDGRPLVVEAVSVEVSGGGERRDELEMALRRTTPLAPRHQGRVFTDGAWVDCPVY
                     DRADLVPGDTLDGPAIVTESTATTMVEPGWRAEMTPRLHLVLRRVVPRAQRFAAGTSV
                     DPVLLEVFNNLFMSVAEQMGAVLANTAHSVNIKERLDFSCAVFDADGGLVANAPHIPV
                     HLGSMGESVRTVMRSRAATMKPGDSFVLNSPYNGGTHLPDVTVITPVFVGERPLFYVA
                     SRGHHADIGGVTPGSMPPDSTTIDDEGVLIDDLPLVEGGRFREAEMVALFTDGPHPAR
                     NVRQNIADLQAQLAANEKGAQELGRMVERFGVETVLAYMGHVQANAEESVRRVLARLD
                     DGDFAVEMDDGAVIKVAVRVDKAARSARIDFTGTSAQRPGNMNAPSSICRAAVLYVFR
                     TIVDDAIPLNEGCLKPLEIVIPQGSMLAPKRPAAVVAGNVETSQAIVDCLMGALKVMA
                     AAQGTMNNFTFGDAARQYYETICGGAGAGPDFDGASAVQTHMTNSRLTDPEVLEWRFP
                     VLVDGFAIRKGSGGAGAHRG"
     gene            complement(3400..>3655)
                     /locus_tag="VLL76_11665"
     CDS             complement(3400..>3655)
                     /locus_tag="VLL76_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HSV30211.1"
                     /translation="LTEMAELVTTATLAAARSGTPQAIEPLIAMDLSLSKLLSDATLE
                     QMTRDRAYYLWQEAGCPHGNDQEYWFTAANEIQGLRASLR"
BASE COUNT          547 a         1243 c         1318 g          547 t
ORIGIN      
        1 gccgcgatgg gcgccggcgc cgcccgagcc cttgcggatg gcgaagccgt ccaccagcac
       61 cgggaagcgc cattccagca cctcggggtc ggtcaggcgg gaattggtca tgtgggtctg
      121 caccgcgctg gcgccgtcga agtccggccc ggccccggcg ccgccgcaga tggtctcgta
      181 atactggcgg gcggcatcgc cgaaggtgaa gttgttcatg gtgccctggg cggccgccat
      241 caccttcagc gcccccatca ggcaatcgac gatggcctgg ctggtctcga cgttgccggc
      301 caccacggcg gccgggcgtt tgggcgccag catggagcct tgggggatga cgatctccag
      361 cggcttcagg cagccctcgt tgagcgggat ggcatcgtcg acgatggtgc ggaagacata
      421 cagcacggcg gcgcggcaga tggacgacgg cgcgttcatg ttgccggggc gctgggcgct
      481 ggtgccggtg aagtcgatgc gggcgctgcg cgccgccttg tccacccgca ccgccacctt
      541 gatgacggcg ccgtcatcca tctcgaccgc gaagtcgccg tcgtcgagcc gggccagcac
      601 ccggcgcacc gattcctcgg cgttggcctg gacgtggccc atataggcca acaccgtttc
      661 gacaccgaag cgttccacca tgcgccccaa ttcctgggcg cccttttcgt tggcggccaa
      721 ctgcgcttgc agatcggcga tgttctggcg gacgttgcgg gcgggatgcg ggccgtcggt
      781 gaacagcgcc accatctcgg cctcgcggaa acggccgcct tcgaccaggg gcaggtcgtc
      841 gatcagcacg ccttcgtcgt cgatggtcgt ggaatcgggc ggcatcgagc cgggggtgac
      901 gccgccgatg tcggcgtggt ggccgcggct ggccacgtag aacagcggcc gctcgcccac
      961 gaacaccggg gtgatgacgg tgacgtcggg caggtgggtg ccgccgttat agggcgagtt
     1021 gagcacgaag gaatcgcccg gcttcatggt ggcggcgcgc gagcgcatga cggtgcgcac
     1081 gctttcgccc atgctgccca gatgcaccgg gatatgcggc gcgttggcga ccaggccgcc
     1141 gtcggcgtcg aacacggcgc aactgaaatc caggcgttcc ttgatgttga ccgaatgggc
     1201 ggtgttggcg agcaccgcgc ccatctgctc ggccacgctc atgaacaggt tgttgaacac
     1261 ctccagcagc accggatcga cgctggtgcc ggcggcgaag cgttgcgcac gcggaacgac
     1321 gcggcgcagc accagatgca ggcgcggcgt catctcggcc cgccagcccg gctcgaccat
     1381 ggtggtggcg gtggattcgg tgacgatggc ggggccgtcg agggtgtcgc cgggcaccag
     1441 gtcggcgcgg tcgtagaccg ggcaatcgac ccaggcaccg tcggtgaaca cccgcccctg
     1501 gtggcgcggc gccagcgggg tggtgcgccg cagcgccatt tccagctcgt cgcggcgctc
     1561 gccgccaccc gagacctcga ccgacaccgc ctcgaccacc agcggccgcc cgtccatcac
     1621 gaaaccgtaa cggccgcgat gggctgcctc gaaccgctcg gccagttggg tgcggtcgcc
     1681 ggcctcgatc tccagcgcgg tgtccgagcc ctggtacttg aggaaaacgc ggcggctaga
     1741 ggccatgtcg gcgcgatcga cgccctggcg ctccagctcg ctccggccct cggcctcgag
     1801 atcggcgaag gcgcggttca cctgggccat ggccttgtcg tcgagcaatg cctcgagcga
     1861 gcgctccttc agcaccgcga gatcggccag ccccatgcca taggccgaca gcacgccggc
     1921 cagcgggtgc aggaacacgg tgtccatgcc cagggcgtcc gccaccaggc aggcatgctg
     1981 gccgccggcg ccgccgaagc tgaccagggt gtagcgggtg acgtcgtagc cgcgctggac
     2041 gctgacctgc ttgatggcgt tggccatgtt gagcacggcg atggacagga agccctcggc
     2101 tacctgctct ggcgcgcggc cggtaagggt tgccagctcg gcgaagcggg cggcgacggc
     2161 ctcggcatcc agcggctggt cggcgtcggg gccgaacacc ttggggaaga aggccggctg
     2221 cagcttgccg accatgacgt tgcagtcggt cacggtcagc ggcccgcccc ggcgatagca
     2281 ggtcgggcca ggattggcgc cggccgactg ggggccgacg cggaagcggg cgccgtcata
     2341 ctccagcacc gagccgccgc ccgccgccac cgtgtggatg cgcatcatgg gcgcgcgcat
     2401 gcgcacgccg gccaccaccg tgtcgaagct gcgctcgtag gtgccgtcgt aatggcagac
     2461 gtcggtcgag gtgccgccca tgtcgaagcc gatgatgcgg tcgaacccgg ccatggccgc
     2521 cgtcttgacc gcgccgacca ccccgccggc ggggccggac aggatggcgt ccttgccctg
     2581 gaagcgccgc gcatcggtca ggccgcccga ggattgcatg aacatcagcc gcgagcccga
     2641 cagctcgccc gccacccggt cgacatagcg gcgcaggatc ggcgacagat aggcatcgac
     2701 cacggtggtg tcgccgcgcc ccaccacctt catcagcggg ctggcttcgt gcgacagcga
     2761 cacctgggtg aagccgatgt cgcgcgccag cttgccgagc gcacgctcgt gctcgggcca
     2821 gcggtaggaa tgcagcagca ccaccgccac cgagcggatg ccgtcctcgt aggccgtcag
     2881 cagccggtcg gcggcgagct tgaggtcgag ctccaccagc acctcgccct ctgccgtgac
     2941 gcgctcgggg atctcggcca cgcgctcgta cagcatctcg ggcagttgga tggcgcgggc
     3001 gaacaggtcg gggcggttct gggtgccgat gcgcaacagg tcggcgaagc cggccgtcac
     3061 cgccagcagg gtgcggtcgc ccttgcgctc cagcaaggcg ttggtcgcca ccgtggtgcc
     3121 catcttgacg gcggccacct gctcgggcgg gatcggcgcg tcgggggcca ggcccaacag
     3181 ccggcggatg ccggccaggg cggcgtcggc gtaatgctcg gggttctcgg acagcagctt
     3241 ggcggtcgcc agcccgccat cgggccgccg cgccacgatg tcggtgaagg tgccgccgcg
     3301 atcgatccag aactgccagg ccatgcgcac cctcaatgga aaggtgcgcc tattgtgccc
     3361 caggatcgcc ggacaaaaaa cggcgaatat gccctgtgat cagcgcaggc tggcccggag
     3421 gccttggatc tcgttggcgg cggtgaacca gtattcctgg tcgttgccgt gggggcagcc
     3481 ggcctcttgc cacaggtaat aggcacggtc gcgcgtcatc tgctccagcg tggcgtcgct
     3541 cagcagcttc gacaggctga ggtccatggc gatgagcggc tcgatggctt gcggcgtgcc
     3601 gctgcgggcg gcggcaaggg tggcggtcgt caccagctcg gccatctcgg tcagc
//
LOCUS       DATIKR010000739         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_168367, whole genome shotgun sequence.
ACCESSION   DATIKR010000739 DATIKR010000000
VERSION     DATIKR010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168367"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VLL76_11670"
     CDS             complement(<1..549)
                     /locus_tag="VLL76_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011755404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHC2 zinc finger domain-containing protein"
                     /protein_id="HSV30212.1"
                     /translation="MAFPPQFLDELRNRVAIAAVVGRRVKLTRKGREHSGLCPFHNEK
                     TPSFTVNEDKGFFHCLAGETGVVTWQGTRPIRELAGGRHLVLTQGDGEPRWIEAEFKS
                     YGVQRLYRIVLGRNGVAKELFATDGHRWFVRDRTSETTTRDLKPGHRLKSVLPPAARF
                     EIDEEGIRHGIVFGDGFLDQAKG"
     gene            complement(617..1075)
                     /locus_tag="VLL76_11675"
     CDS             complement(617..1075)
                     /locus_tag="VLL76_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HSV30213.1"
                     /translation="MLRQQLNDALKTAMLAKDTRVVSTVRLILAALKDRDIAARSRGV
                     MDGIGDDEVMQMLQSMIKQRRESISLYEQGGRLELAQQEQEEIDIITRFLPHQMSEAE
                     IGEGVAAVIAEIGAAGIKDMGKVMAVLKERFAGQMDFTKASATAKKALGG"
     gene            1390..>2063
                     /locus_tag="VLL76_11680"
     CDS             1390..>2063
                     /locus_tag="VLL76_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase domain-containing
                     protein"
                     /protein_id="HSV30214.1"
                     /translation="MHEQRTAMEPNFDIPRPPGATGALVLADGTVLWGKGVGAAGMSV
                     GEVVFNTSMTGYQETLTDPSYAGQIITFTFPHIGNVGTNGEDIETVTPAARGCILRAD
                     ITDPANWRANRHLDEWMKSFGMVGLSGVDTRALTRRIRDAGAPNGTVVHAPDGDFDLR
                     GAWKMAAEWPGLEGMDLAKDVTCRQQYSWDEGEWVLGQGYVTQTAPKHHVVAIDFGAK
                     RNILRCL"
BASE COUNT          348 a          692 c          676 g          347 t
ORIGIN      
        1 gcccttggcc tggtccagga agccgtcacc gaacacgatg ccgtggcgga tgccctcttc
       61 gtcgatctcg aagcgggcgg cgggcggcag caccgatttc aggcggtggc ccggcttgag
      121 gtccctggtg gtcgtctcgg aggtgcggtc gcgcacgaac cagcggtggc cgtcggtggc
      181 gaacaattcc ttggcgacgc cgttgcggcc cagcacgatg cggtacagcc gctggacgcc
      241 gtagcttttg aattcggcct cgatccagcg cggctcgccg tcgccctggg tcagcaccag
      301 gtggcggccg ccggccagct cgcggatggg acgggttccc tgccaggtca ccactccggt
      361 ctcgccggcc aggcagtgga aaaagccctt gtcctcgttg acggtgaagc tgggcgtctt
      421 ttcgttgtgg aaagggcaca ggccggaatg ctcgcgcccc ttgcgggtca gcttgacgcg
      481 gcggccgacc acggcggcga tggccacccg gttgcgcaat tcgtcaagaa actggggcgg
      541 aaacgccatg gaccccctcg ctcatccaac ggccccgcac atatggggcg ggaccgtcaa
      601 aacaccagag ggggtatcaa ccgccgagcg ctttcttggc ggtggcgctg gccttggtga
      661 aatccatctg gccggcgaag cgttccttga gcacggccat caccttgccc atgtccttga
      721 tgccggcggc gccgatctcg gcgatgacgg ccgcgacgcc ctcgccgatc tcggcctcgg
      781 acatctggtg cggcaggaag cgggtgatga tgtcgatctc ttcctgctcc tgctgggcca
      841 gctcgaggcg gccgccctgc tcgtacagcg agatgctttc gcggcgctgc ttgatcatgg
      901 actgcagcat ctgcatcacc tcgtcgtcgc cgatgccgtc catcacgccg cgcgaacgcg
      961 ccgcgatgtc gcggtccttc agagcggcca ggatcaggcg aacggtcgaa accacgcggg
     1021 tgtccttggc cagcatggcg gttttgagcg cgtcgttaag ctgctggcgc agcatggtgc
     1081 ctccccccaa atggactgcg gtccgggcta tcggaaaaga ccgaagctac cccaaaaccg
     1141 gaccaaaggc aaagaatcta gcgaattgaa aaaattggct tttcggcatt gcggcaaaag
     1201 cttgacaggc gcgccagctt tctataaaca gcggcaaatt tgcctgccgc acactgggtc
     1261 cagcaggggc cccgccggag gacgtcgcga ccgagaaggc gcgagtcctc gcgcctttgt
     1321 gcggcccggc gctatcatgc accgcccccg ggtttctccc gcccgggtgc gtctttataa
     1381 aggacagata tgcacgagca gcggaccgcg atggagccga acttcgacat cccgcgtccc
     1441 ccgggcgcga ccggcgccct ggtgctggcg gacggcaccg tgttgtgggg caagggtgtc
     1501 ggcgccgccg gcatgtcggt gggcgaggtg gtgttcaaca cctcgatgac cggctaccag
     1561 gagacgctga ccgacccgtc ctacgcgggc cagatcatca ccttcacctt cccgcatatc
     1621 ggcaacgtcg gcaccaacgg cgaggacatc gagacggtga ccccggcggc gcgcggctgc
     1681 atcctgcgcg ccgacatcac cgatcctgcc aactggcgcg ccaatcgtca tctggacgag
     1741 tggatgaagt cgttcggcat ggtcggcctg tccggagtgg atacccgcgc gctcacccgc
     1801 cgcatccgcg acgccggcgc ccccaacggc accgtggtgc acgcccccga cggcgatttc
     1861 gacctgcgcg gcgcctggaa gatggctgcc gaatggccgg gcctggaagg catggacctc
     1921 gccaaggacg tcacctgccg gcagcaatat tcctgggacg agggcgagtg ggttctgggc
     1981 cagggctacg tcacccaaac cgcccccaag caccacgtcg tcgccatcga tttcggcgcc
     2041 aagcgcaaca tcctgcgctg cct
//
LOCUS       DATIKR010000740         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_119651, whole genome shotgun sequence.
ACCESSION   DATIKR010000740 DATIKR010000000
VERSION     DATIKR010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119651"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(228..1007)
                     /gene="hisN"
                     /locus_tag="VLL76_11685"
     CDS             complement(228..1007)
                     /gene="hisN"
                     /locus_tag="VLL76_11685"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HSV30215.1"
                     /translation="MTESCPNEFIALADRLAEAARPVIRKYFRTPVAVDDKDDASPVT
                     IADREVEAEMRTLIRAAFPDHGILGEEHGAENMEAEYVWVLDPIDGTKAFITGKPSFG
                     TLIALTRKGRPILGIIDQAILGERWLGAAGHPTTLNGQPARVRECDELAKAYAYTTGP
                     EFFDAATLPAWNRIAARVKQPRYGCDCYAYALLASGFVDLVVEAGLKPYDFAALVPVI
                     ENAGGIATDWAGKPLTIHSDGRVCAAGDARLHAKALEVLAG"
     gene            complement(1016..1549)
                     /locus_tag="VLL76_11690"
     CDS             complement(1016..1549)
                     /locus_tag="VLL76_11690"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HSV30216.1"
                     /translation="MTKEFEAWAGAVLFALILVVGINVGGDMMEHALIPHPPAAEQAA
                     EVPAAAKPVAMEDVAPDPIVPLLAQASPEAGQAAAKPCVACHTFEEGGPSRVGPNLHG
                     IVGRDIGSVAGFAYSPGLTTVEGAWTDERLDGFLLNPKAAVPNTKMSFAGIKKAEDRA
                     AVIAYLRSLSPNAPPPQ"
BASE COUNT          231 a          518 c          590 g          267 t
ORIGIN      
        1 cccgccatga cgatggcgat gaatgctgcg gcgaggggct ttcctagact gaacacgcgc
       61 tctcctgggc tgtcatcccg agcgcagcga gggatctttc acccaaggtg cctgaaagat
      121 ccctcggtcg ctgcgctcct cgggatgaca acggattggt tgccgaccgg cgcagagttt
      181 ggcctctacc gccggtcagg acaagcccgc cttgcggccc ggccgtctta gcccgccagt
      241 acctccaatg ccttggcgtg caggcgggcg tcgccggcgg cgcagacgcg gccgtcggaa
      301 tggatggtca ggggcttgcc ggcccagtcg gtggcgatgc cgccggcatt ctcgatcacc
      361 ggcaccaagg cggcgaagtc atagggcttg aggccggcct cgaccaccag gtcgacgaaa
      421 cccgaagcca gcagggcata ggcatagcaa tcgcagccat agcgcggttg cttgacgcgg
      481 gcggcgatgc ggttccaggc gggcagggtg gcggcgtcga agaattccgg gccggtggtg
      541 taggcatagg ccttggccaa ttcgtcgcat tcccgcacgc gggccggctg gccgttcagc
      601 gtggtggggt ggccggcggc gcccagccag cgctcgccca ggatcgcctg gtcgatgatg
      661 cccaggatgg ggcggccctt gcgggtcagg gcgatcaggg tgccgaagct gggcttgccg
      721 gtgatgaagg ccttggtgcc gtcgatgggg tccagcaccc agacgtattc cgcctccatg
      781 ttctcggcgc cgtgctcctc gcccaggatg ccgtggtcgg gaaaggcggc gcggatcagc
      841 gtgcgcatct cggcctcgac ctcgcggtcg gcgatggtca ccggcgaggc atcgtccttg
      901 tcgtccaccg ccaccggagt gcggaaatac ttgcggatca ccgggcgcgc ggcttccgcc
      961 agtcggtcgg ccagggcgat gaattcgttg gggcagcttt cggtcacggg cagtctcact
     1021 gtggcggcgg cgcgttgggc gacagggaac gaagataggc gatcacggcg gcgcggtctt
     1081 cggccttctt gatgccggcg aacgacatct tggtgttggg caccgccgct ttgggattga
     1141 gcaggaagcc gtcgaggcgc tcgtcggtcc aggcgccctc gacggtggtc aggccggggg
     1201 aataggcgaa gcccgccacc gagccgatgt cgcggccgac gatgccgtgc aggttggggc
     1261 cgacccggct gggtccgcct tcttcgaagg tatggcaggc gacacagggc ttggcggcgg
     1321 cctggccggc ctcgggactc gcctgggcca gcagcggcac gatggggtcg ggcgccacgt
     1381 cttccatggc gacgggcttg gcggcggcgg ggacctcggc ggcttgttcg gccgcgggcg
     1441 gatgcgggat cagggcgtgc tccatcatgt cgccgccgac attgatgccg accaccagga
     1501 tcagcgcgaa cagcaccgcg ccggcccatg cctcgaactc cttcgtcatc gcctctgcct
     1561 ccctgcagtt agtgtcgccg ctggcggacc cacgcgccag ccccgg
//
LOCUS       DATIKR010000741         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_34400, whole genome shotgun sequence.
ACCESSION   DATIKR010000741 DATIKR010000000
VERSION     DATIKR010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34400"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1512)
                     /locus_tag="VLL76_11695"
     CDS             complement(<1..>1512)
                     /locus_tag="VLL76_11695"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV30217.1"
                     /translation="AVADQPYPVDAQTYVRALTPALESVGLVMEAAVADTRDYAERNM
                     REARNAMAVYLTLAALALALGFATLTLVTTRLLKPLRRLQGQLAALAAGDLDIAIPPP
                     AHHDEIGQFQDAVLAFRDGLVERQRMADELAAQGERLNSLINAMPDFVCLKDGEGRWL
                     VANDHGAALFGLAGIDYVGKTDIELAQLSAGCRQSLCGCVDTDERAWTRGQTTRAEEV
                     VTDSLGNAHFFDVVKVPLFSRSGARQGLVVVGRDITERRVIEAALARLSRQNELILES
                     AGDGIIGMDAEGRTVFVNPAATRMTGWDAADLMDKPHHHLVHHTRPDGSAHPAEECPV
                     SMTLADGQPRQCSDDIFFRKDGSSFAVEFMVNPMIEQGQVRGAVIVFRDIEDRKRSQI
                     EIDSLLDELKRSNADLEQFAYAISHDLQEPLRMVTSYVQLLARRYRDKLDPEADEFIG
                     FAVDGTARMYAMINALLEYARVNTRGNEPHPVNSGAALHQALANLAMSLAEAGA"
BASE COUNT          226 a          492 c          540 g          254 t
ORIGIN      
        1 gcgccggcct cggccagcga catggccaaa ttcgccagcg cctggtgcag cgccgctccg
       61 ctgttcacgg ggtgcggctc gttgccgcgg gtgttgacgc gggcgtattc cagcagtgcg
      121 ttgatcatgg cgtacatgcg cgccgtgccg tccacggcga acccgatgaa ctcgtcggcc
      181 tcgggatcga gcttgtcgcg gtagcgccgc gccagcagct ggacatagct ggtcaccatg
      241 cgcagcggtt cctgcaggtc gtgcgagatg gcgtaggcga attgctccag atcggcgttg
      301 gaccgcttca attcgtcgag caggctgtcg atctcgatct gcgagcgctt gcggtcctcg
      361 atgtcgcgga acacgatgac ggcgcccctg acctggcctt gctcgatcat ggggttgacc
      421 atgaactcga ccgcgaacga gctgccgtcc ttgcggaaga agatgtcgtc ggagcattgg
      481 cgcggctggc cgtcggccag ggtcatggat accgggcatt cctccgccgg atgcgccgag
      541 ccgtccgggc gggtgtggtg caccaggtgg tggtgcggct tgtccatcag gtcggcggcg
      601 tcccagccgg tcatgcgcgt ggccgccggg ttgacgaaca ccgtacgccc ttcggcatcc
      661 atgccgatga tgccgtcgcc ggcggattcg aggatcagtt cattttggcg cgacagccgc
      721 gccagggcgg cttcgatcac ccgccgctcg gtgatgtcgc ggccgaccac caccagaccc
      781 tggcgggcgc ccgagcggct gaacagcggg accttgacca cgtcgaagaa gtgggcgttg
      841 ccaagtgaat ccgtcaccac ctcttcggca cgagtggtct ggccccgcgt ccaggcgcgc
      901 tcgtcggtgt cgacgcagcc gcacagggat tgacggcagc cggcgctcag ttgcgccagt
      961 tcgatgtcgg tcttgcccac atagtcgatg ccggcaaggc cgaacagggc ggcgccatgg
     1021 tcgttggcca ccagccagcg gccctcgccg tccttcaggc agacgaaatc cggcatggcg
     1081 ttgatcaaac tgttgagccg ctcgccctgg gcggccagtt cgtcggccat gcgctggcgc
     1141 tcgaccagtc cgtcgcggaa cgccagcacc gcgtcctgga actggccaat ctcgtcgtgg
     1201 tgggcgggcg gcgggatggc gatgtccagg tcgccggcgg ccagggcggc caactgaccc
     1261 tgcagccggc gcaacggctt gagcaggcgg gtggtgacga gggtcagcgt ggcgaagccc
     1321 agagccaacg ccagcgccgc cagggtcagg tagacggcca tggcgttgcg ggcctcgcgc
     1381 atgttgcgct cggcataatc gcgggtgtcg gcgaccgccg cctccatgac caggccgacc
     1441 gattcaagcg cgggcgtcag ggcgcggaca taggtctggg cgtccaccgg atagggctgg
     1501 tcggcgacgg cc
//
LOCUS       DATIKR010000742         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_131989, whole genome shotgun sequence.
ACCESSION   DATIKR010000742 DATIKR010000000
VERSION     DATIKR010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131989"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VLL76_11700"
     CDS             complement(<1..228)
                     /locus_tag="VLL76_11700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30218.1"
                     /translation="MKAGRRTLGDKLRHLLAGSIRRRLVVGVAVVHAVLMTVFVADVL
                     FRQLTFLNEQSVGRATGLARVVSVNSVSWVLA"
     gene            complement(225..1136)
                     /locus_tag="VLL76_11705"
     CDS             complement(225..1136)
                     /locus_tag="VLL76_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013029790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HSV30219.1"
                     /translation="MTAIDRRSFLGFVLALGVAACDDQGAEDYRPTYTIKSATPAKTY
                     RVGCPFNTPETLFAVYRPLIDYLNARLGGPVLELEASRDYESFEQKLYYRNFDFALAN
                     PYQTVMAVTNGFRIFAKMGDDHQNRGMILVRRDSGITRVADLRGKVVSYPASSALASA
                     LLPQDFLSRQGLDIGKDVDNRYVGSEESSILSVFLGRSAAATTWPLAWSRFQRDDPAK
                     ASQLEVKWQTESLPNGGWVARDDVPPDLVGRIAGLLLTLHESAEGRQLLDHMMVSRFE
                     PADDATYAPVQDFLRRFNDTVRPVALP"
     gene            1263..1685
                     /locus_tag="VLL76_11710"
     CDS             1263..1685
                     /locus_tag="VLL76_11710"
                     /inference="COORDINATES: protein motif:HMM:NF019874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV30220.1"
                     /translation="MIAGGAAHAQEPVTKEEVVAFVDRMVAHIDAVGPERAFADFSDT
                     KGPWIQGQLYPFCHSLAGINVAHGGNPNMVGKGGVLDIRDPDGRYVNRLIFDKVLAEG
                     KGWVEYKWPNSITKKIEMKDVYSVMVHDKYICGSGRYR"
     gene            1709..>1997
                     /locus_tag="VLL76_11715"
     CDS             1709..>1997
                     /locus_tag="VLL76_11715"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV30221.1"
                     /translation="MTPADLDAVMALADDIHADHPEGRAVFADRLALFAAGCAVLETG
                     GRILGYCVAHPIRQGHPAPLDSVLGALAADADCLHLHDLALLPEARGAGHPA"
BASE COUNT          344 a          670 c          668 g          315 t
ORIGIN      
        1 ggccagcacc cacgacacgc tgttgaccga caccacgcgg gccaggccgg tggcccggcc
       61 gacgctctgc tcgttgagga aggtgagctg gcgaaagagc acgtcggcga cgaacacggt
      121 catcagcacc gcatgcacca ccgccacgcc caccaccagc cggcggcgga tcgaacccgc
      181 cagcaggtgg cggagcttgt ccccgagggt gcggcggccg gccttcatgg cagcgccacc
      241 gggcggacgg tgtcgttgaa gcggcgcagg aagtcctgca ccggggcata ggtggcatcg
      301 tcggccggct cgaaccggct gaccatcatg tggtcgagca attggcggcc ctcggcgctt
      361 tcgtgcagcg tcagcagcag gccggcgatc cggcccacca gatcgggcgg cacgtcgtcc
      421 cgcgccaccc agccgccatt gggcagcgac tcggtctgcc acttcacctc caattgcgac
      481 gccttggccg ggtcgtcgcg ctggaaccgg ctccacgcca gcggccaggt ggtcgcggcg
      541 gccgagcggc ccagaaagac gctgaggatc gacgattcct cggatcccac atagcggttg
      601 tcgacgtcct tgccgatgtc gagaccctgg cgcgacagga agtcctgggg cagcagggcc
      661 gacgccaggg cgctggaggc gggatagctg accaccttgc ccctgaggtc cgccacccgc
      721 gtgatgccgc tgtcgcgccg gaccaggatc atgccccggt tctgatggtc gtcgcccatc
      781 ttggcgaaga tgcgaaagcc gttggtgacc gccatcaccg tctggtacgg gttcgccagg
      841 gcgaaatcga aattgcggta atacagcttc tgctcgaacg attcgtaatc gcgcgaggcc
      901 tccagctcca gcaccggccc acccaggcgg gcgttgaggt aatcgatcag cggccgatag
      961 accgcgaaca gggtttcggg agtgttgaac gggcagccga cgcgataggt cttggcgggc
     1021 gttgccgact tgatggtgta ggtcggccgg tagtcctcgg cgccttggtc atcgcaggcc
     1081 gcgaccccca gcgccaggac aaagccaaga aaacttcggc gatcgattgc ggtcatggga
     1141 aactcccccg ccttcgatct ttgccatttt cggctgtcgg cgcaatccgc tatacagaag
     1201 ggcagggatg cgggagccga agaatgtggg caatcacgcg taaacttggg gttgtcttgg
     1261 cgatgattgc cggcggcgcg gcgcatgccc aagagccggt gaccaaggaa gaggtcgtgg
     1321 ccttcgtcga ccggatggtc gcccatatcg atgcggtcgg ccccgaacgc gccttcgccg
     1381 acttcagcga caccaagggg ccgtggatcc aaggccagct ttatccgttc tgccattcgc
     1441 tggccggcat caacgtcgcc catggcggca accccaacat ggtgggcaag ggcggcgtgc
     1501 tcgacatccg cgaccccgac gggcgctacg tcaaccgcct gatcttcgac aaggtgctgg
     1561 ccgagggcaa gggctgggtc gaatacaaat ggcccaactc gatcaccaag aagatcgaga
     1621 tgaaggacgt ctattcggtc atggtgcacg acaagtacat ctgcggctcg ggccgctacc
     1681 gatgacgcca tcggcatttt ggcgggccat gacgcccgcc gacctggatg cggtgatggc
     1741 gctggccgac gacatccacg ccgaccaccc ggaaggccgc gccgtgttcg cggaccggct
     1801 ggcgcttttt gcggccggct gcgccgtgct ggaaaccggc ggccgcatcc tcggctattg
     1861 cgtcgcccac cccatccgcc agggccatcc ggcgccgctg gacagcgtgt tgggcgccct
     1921 cgccgccgac gccgactgcc tgcacctgca cgacctggcc ttgctgcccg aggcgcgcgg
     1981 cgccggccat cccgccg
//
LOCUS       DATIKR010000743         4253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_156541, whole genome shotgun sequence.
ACCESSION   DATIKR010000743 DATIKR010000000
VERSION     DATIKR010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4253
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156541"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VLL76_11720"
     CDS             complement(<1..321)
                     /locus_tag="VLL76_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV30222.1"
                     /translation="MKTEPKPALLEVRDLAVSFGEVEAVRGVSFQLSKGETLALVGES
                     GSGKSVTALSVLQLLPYPRARHPKGSILLGGQELVGADERTLRAVRGNRVAMVFQEPM
                     TSLNP"
     gene            complement(318..1349)
                     /locus_tag="VLL76_11725"
     CDS             complement(318..1349)
                     /locus_tag="VLL76_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV30223.1"
                     /translation="MKRRLTPLTERRIQAFVRNRRGFWSLWLFLAVFVVSLFAELVAN
                     DRPIVVSYDGGLYFPVLKDYPETTFGGDFATYADYRDPYVARKIAEKGWALWPPVRFS
                     YGTINYDVVRPHPAPPNAENWLGTDDQGRDVLARLLYGLRLSILFGLALTVVSSIIGV
                     AAGAVQGYFGGRIDLVGQRLLEIWGGLPQLLVLIIVASVIQPGFWTLLLVLALFSWTS
                     LVGVVRAEFLRARNFDYVRAAKALGMGDARVMARHVLPNAMVATLTFMPFILNGSIVS
                     LTALDFLGLGMPAGSPSLGNLLQQGKENLQAPWLGLAGFIVVAALLSLLVFVGEAVRD
                     AFDPRKTTT"
     gene            complement(1353..2444)
                     /locus_tag="VLL76_11730"
     CDS             complement(1353..2444)
                     /locus_tag="VLL76_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HSV30224.1"
                     /translation="MLAYTIRRLALIPLTLFGIMLINFVIVQFAPGGPVEQLVARIEG
                     QASSTQRVSGGGADIQAMKAQAGRGSAYRGAQGLDPNFIKEIEKQFGFDKPAHERFFQ
                     MLVNYASFDFGKSFYRDVPVTQLVLEKMPVSVSLGLWSTLIIYLVSIPLGVAKARRDG
                     SAFDLSTSWAIIVGYAVPSFLFAILLIVVFAGGKYLAWFPLRGLTSPDWSQMDWLARM
                     RDYFWHLALPVTALVIGGFAGLTMLTKNSFLEEINKQYVVTARAKGLSEQRVLYGHIF
                     RNAMLLVVAGFPTALMSILFTGSILIEIIFSLDGIGLLGYEAVMSRDYPVMFGTLYMF
                     SLLGLVLSLISDLTYHWVDPRIDFGKREV"
     gene            complement(2451..4214)
                     /locus_tag="VLL76_11735"
     CDS             complement(2451..4214)
                     /locus_tag="VLL76_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV30225.1"
                     /translation="MRGEATRTYESHGIAMHGNLKYRPGFAHFDYVNPDAPKGGELRL
                     ADIGTFDSLNPFIVKGQAPDRADLPFETLLVSSADEPFSSYGLLAESVETPPDRSWVA
                     FTLRREARWHDGKKVTPEDVIFSLDVLRTKGAPTYRFYYAGIDKVEKVGERGVKFTFK
                     PGDNRELPLIVGELPILPKHYWETRDFSQTTLEPPLGSGPYKVAHLEPGRFIVYERVK
                     DYWGADLPVRKGFYNFDRIRVDYYRDTTVALEALKAGEYDFREENEAKKWASGYADWP
                     ALADGRARQEKLDNDLPAGMQGYAYNLRRPLWSDARVRRALALAFDFEWTNRNLFSGQ
                     YTRSESYWSNSELASTGLPSKAELKVLEPLRAGVPPEVFTAEYDLPAADGEDGIRPNL
                     RQAMKLLEQAGWQVVDGKLVKDGRPFTFEILLGQPTFERVTLPFVRNLARLGITATVR
                     TVDPTQYVNRVRAFDYDMIVASWGQSLSPGNEQAMYWTSDSADHPGSRNLVGIKNPAV
                     DKLVEAVIAAPDRESLVARTKALDRVLLWNHYVIPQWHIGYDRVAYWDKLGRPERTPM
                     RGYQLMSWWSKAARQSANRGD"
BASE COUNT          750 a         1378 c         1444 g          681 t
ORIGIN      
        1 cgggttgagc gaggtcatcg gctcctggaa caccatggcg acgcggttgc cgcgcacggc
       61 gcgcaaggtc cgttcgtcgg cacccaccag ttcctggccg ccgagcagga tgctgccctt
      121 gggatggcgg gcacggggat agggcagcaa ttgcagcacc gacaaggcgg tgaccgactt
      181 gcccgagccc gattcgccca ccagggccag ggtctcgccc ttggacaatt ggaacgacac
      241 gccccggacc gcctcgacct cgccgaacga gacggcaagg tcgcgcactt ccagcagagc
      301 cggcttcggt tcggtcttca tgtcgtcgtc tttcttggat cgaaggcgtc gcgcaccgcc
      361 tcgccgacga acaccagcag cgacagcaac gccgccacca cgatgaagcc ggccaggccg
      421 agccatggcg cctgaaggtt ctccttgccc tgctgcagca ggttgcccag cgacggcgag
      481 ccggcgggca tgccgaggcc caggaagtcc agcgccgtca gcgacacgat cgaaccgttg
      541 aggatgaacg gcatgaaggt cagcgtcgcc accatggcgt tgggcagcac gtggcgcgcc
      601 atgacgcggg cgtcgcccat gcccagggcc ttggcggcgc ggacatagtc gaaattgcgg
      661 gcgcgcagga attcggcgcg caccacgccg accaggctgg tccacgagaa cagcgccagc
      721 accagcagca gtgtccagaa gccgggctgg atcaccgagg cgacgatgat cagcaccagc
      781 aattgcggca atccgcccca tatttccagc aggcgctggc cgaccagatc gatccggccg
      841 ccgaaatagc cctgcaccgc gccggcggcg acgccgatga tcgagctgac tacggtcagg
      901 gccaggccga acaggatcga caggcgcagc ccatagagca gccgcgccag cacgtcgcgg
      961 ccctggtcgt cggtgcccag ccagttctcg gcattgggcg gggcgggatg ggggcgcacc
     1021 acgtcgtaat tgatggtgcc gtaggagaac cgcaccggcg gccacagcgc ccagcccttc
     1081 tcggcgatct tcctggcgac ataggggtcg cggtaatcgg cgtaggtggc gaaatcgccg
     1141 ccgaacgtgg tctcgggata gtccttgagc accgggaaat acagcccgcc gtcatagctg
     1201 acgacgatgg ggcggtcgtt ggccaccagt tcggcgaaca gcgagaccac gaacaccgcc
     1261 aggaacagcc acagcgacca gaagccccgg cggttgcgga cgaaggcctg gatgcggcgc
     1321 tcggtcaggg gggtaaggcg gcgtttcatg gctcacacct cccgcttgcc gaagtcgatg
     1381 cggggatcga cccagtggta ggtcaggtcg ctgatcagac tgagcaccag gcccagcagg
     1441 ctgaacatgt aaagcgtgcc gaacatcacg gggtagtcgc ggctcatcac cgcctcgtag
     1501 cccaagaggc cgatgccgtc gagcgagaag atgatctcga tcaggatcga gccggtgaac
     1561 aggatgctca tcagcgcggt gggaaagccc gccaccacca gcagcatcgc gttgcggaag
     1621 atgtggccgt acagcacgcg ttgctcgctc aggcccttgg cccgcgccgt gaccacgtat
     1681 tgcttgttga tctcttccag gaacgagttc ttggtcagca tagtcaggcc ggcgaagccg
     1741 ccgatgacca aggcggtgac cggcagcgcc aggtgccaga aatagtcgcg catgcgggcg
     1801 agccagtcca tctgggacca gtcggggctg gtcaggccgc gcagcgggaa ccacgccagg
     1861 tacttgccgc cggcgaacac cacgatcagc aggatggcga acaggaagct gggcacggca
     1921 tagccgacga tgatggccca cgaggtcgag aggtcgaagg ccgagccgtc gcgtcgtgcc
     1981 ttggcgacgc ccaagggtat ggacaccaga tagatgatca gggtggacca caggccgagc
     2041 gacaccgaca ccggcatctt ttccagcacc aactgggtca ccggcacgtc acggtagaag
     2101 ctcttgccga agtcgaagct ggcatagttg accagcatct ggaagaagcg ctcgtgcgcc
     2161 ggcttgtcga agccgaactg cttctcgatt tccttgatga aattggggtc cagcccctgg
     2221 gcgccgcgat aggccgagcc ccggccggcc tgcgccttca tcgcctggat gtcggcgccg
     2281 ccgcccgaga cgcgctgggt cgaactggcc tggccctcga tgcgggcgac caattgctcg
     2341 accgggccgc cgggggcgaa ctggacgatg acgaagttga tcagcatgat cccgaacagg
     2401 gtcagcggga tcagcgccag gcggcggatg gtgtaggcga gcacggccgg tcagtctccc
     2461 cggttggcgc tttggcgcgc cgccttggac caccagctca tcagttggta gccgcgcatg
     2521 ggcgtccgct ccggtcgccc cagcttgtcc caataggcga cgcggtcata gccgatgtgc
     2581 cattgcggaa tgacgtaatg gttccacagc agcacccggt ccagcgcctt ggtgcgcgcc
     2641 accagtgatt cacggtcggg ggcggcgatc accgcctcca ccagcttgtc caccgccggg
     2701 ttcttgatgc ccaccaggtt gcggctgccg ggatggtcgg ccgaatcgct ggtccaatac
     2761 atggcctgct cgttgccggg cgacagcgac tggccccaac tggcgacgat catgtcgtag
     2821 tcgaaggcgc gcacccggtt gacgtattgg gtgggatcga cggtgcggac ggttgcggtg
     2881 atgccaagcc gcgccaggtt gcgcacgaag ggcagggtga cgcgctcgaa ggtgggctgg
     2941 cccagcagga tctcgaaggt gaagggccgc ccgtccttga ccagcttgcc gtccaccacc
     3001 tgccagcccg cctgttccag cagcttcatg gcctggcgca gattgggtcg gatgccgtcc
     3061 tcgccgtcag cggcgggcag gtcgtattcg gcggtgaaga cctcgggcgg cacccctgcc
     3121 cgcagcggct ccagcacctt caactcggct ttcgagggca ggccggtgga cgccagttcg
     3181 ctgttggacc aatagctttc cgagcgggtg tactggcccg agaacaggtt gcggttggtc
     3241 cattcgaagt cgaaggccag cgccagcgcg cggcgcaccc gcgcatccga ccacagcgga
     3301 cggcgcaggt tgtaggcata gccctgcatg ccggcgggca ggtcgttgtc cagcttttcc
     3361 tggcgggcgc ggccgtcggc caaagccggc cagtcggcgt aaccgctggc ccatttcttg
     3421 gcctcgttct cctcgcggaa gtcgtattcg ccggccttca acgcctccag cgccacggtg
     3481 gtgtcgcggt agtaatccac ccggatgcgg tcgaaattgt aaaagccctt gcgcaccggc
     3541 aggtcggcgc cccagtaatc cttgacccgc tcgtagacga tgaagcggcc cggctccaga
     3601 tgcgcgacct tgtaggggcc gctgcccagc ggcggctcca gcgtggtctg gctgaagtcg
     3661 cgcgtctccc agtaatgctt gggcaggatc ggcagctcgc cgacgatcag cggcagttcg
     3721 cggttgtcgc ccggcttgaa ggtgaacttc acgccgcgct cgcccacctt ctcgaccttg
     3781 tcgatgccgg cgtaatagaa gcggtaggtc ggcgcgccct tggtccgcag cacgtcgagc
     3841 gaaaagatca cgtcctcggg cgtcaccttc ttgccgtcgt gccagcgcgc ctcgcggcgc
     3901 agggtgaagg ccacccatga gcggtcgggc ggcgtctcga cgctttccgc cagcaggccg
     3961 tagctggaga acggttcgtc ggccgaggac accagcagcg tctcgaacgg caggtcggcg
     4021 cggtcgggcg cctggccctt gacgatgaac gggttcaggc tgtcgaaggt gccgatgtcg
     4081 gccagccgca gctcgccgcc cttgggcgcg tcgggattga cgtagtcgaa atgcgcgaag
     4141 cccggccggt atttcaggtt tccgtgcatg gcgatgccat gcgattcata tgttcgcgtg
     4201 gcttcgccac gcatggcgat gccgtgcgcg acttcggcat gggcggcgcc cgc
//
LOCUS       DATIKR010000744         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_108110, whole genome shotgun sequence.
ACCESSION   DATIKR010000744 DATIKR010000000
VERSION     DATIKR010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108110"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VLL76_11740"
     CDS             complement(<1..287)
                     /locus_tag="VLL76_11740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV30226.1"
                     /translation="MRSILGAVCGCLALVLAAKADAGEIKVLTWSSYLSPDVVQKFEK
                     DTGIKVKVDTVTNYVDLLQPLLTGKSGYDIAFPADFQVRDLIQKGLLEKVYV"
     gene            complement(356..1717)
                     /locus_tag="VLL76_11745"
     CDS             complement(356..1717)
                     /locus_tag="VLL76_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HSV30227.1"
                     /translation="MTDSIKYFLPEEKLPKAWYNLAADLPVPLPPPLHPGTMQPIGPD
                     DLAPIFPNAIIAQEVSTERWIDIPEPVRDALRLWRPSPLVRARRLEKALDTPARIYFK
                     YEGVSPAGSHKPNTAIPQAFYNKQEGVKRLSTETGAGQWGSSLAFAGSMFGLEVEVFM
                     VKISYNQKPYRRALMETYGARCIASPSALTAAGRAVLERDPESNGSLGIAISEAVEVA
                     VSRDDTKYALGSVLNHVCLHQTVIGEEAILQMEMAGDEPDVIVACTGGGSNFAGLAFP
                     YIRENLKNGKKTRIVAVEPTSCPTLTKGRYAYDFGDTGHLTPLVKMHTLGSTFMPPGS
                     HSGGLRYHGMAPMVSHVKELGLCEARAFAQTECFKAAVLFAREEGIVPAPESSHAVKG
                     AIEEALAAKAEGKPRTILFNLSGHGHFDMQAYTDFFAGKLQDLPYGDKELEAALGSLP
                     KIG"
BASE COUNT          287 a          603 c          621 g          336 t
ORIGIN      
        1 acgtagacct tttccagcaa gcccttttgg atcaggtcgc gcacctggaa gtcggcggga
       61 aaggcgatgt cgtagccgga cttgccggtc aacagcggct gcagcagatc gacgtagttg
      121 gtgacggtgt cgaccttgac cttgatgccg gtgtccttct cgaacttctg caccacgtcg
      181 ggcgacagat aggacgacca ggtcagcacc ttgatctcgc ccgcgtcggc cttggccgcc
      241 agcaccaggg ccaggcagcc gcacacggca cccaggatcg atctcatgga catggcggct
      301 ccccccgcgt ttccctgctt ccgttctacc gcagggggag cgccgtgtca tgttctcagc
      361 cgatcttggg cagcgatccc agggcggcct ccaattcctt gtcgccgtag ggcaggtcct
      421 gcagcttgcc ggcgaagaag tcggtatagg cctgcatgtc gaaatggccg tggcccgaca
      481 ggttgaacag gatggtgcgg ggcttgccct cggccttggc ggccagcgcc tcctcgatgg
      541 cgcccttcac cgcgtgcgac gattccgggg ccggcacgat gccttcctcg cgggcgaaca
      601 gcaccgccgc cttgaagcat tcagtttggg cgaaggcgcg cgcctcgcac aggcccaact
      661 ccttgacgtg gctgaccatg ggcgccatgc cgtgatagcg caggccgccc gaatgcgaac
      721 ccggcggcat gaaggtcgag cccagcgtgt gcatcttgac cagcggcgtc aggtggccgg
      781 tgtcgccgaa atcataggcg tagcggccct tggtcagcgt cgggcacgag gtcggctcga
      841 cggcgacgat gcgggtcttc ttgccgttct tgaggttctc gcggatgtag gggaaggcca
      901 ggccggcgaa gttcgaaccg ccgccggtgc aggcgacgat gacgtcgggc tcgtcgcccg
      961 ccatctccat ctgcaggatg gcttcctcgc cgatcaccgt ctggtgcagg cagacgtggt
     1021 tgagcacgct gcccagggcg tatttggtgt cgtcgcggct gacggcgacc tcgaccgcct
     1081 cggagatggc gatgcccagc gagccgttgg actcggggtc gcgctccagc acggcgcggc
     1141 cggcggcggt cagcgccgac ggcgaggcga tgcagcgggc gccataggtc tccatcaggg
     1201 cgcggcgata gggcttctgg ttgtacgaga tcttgaccat gaagacctcg acctcgagcc
     1261 cgaacatcga gccggcgaac gccagcgagc tgccccattg gccggcgccg gtctcggtcg
     1321 acagccgctt gacgccttcc tgcttgttgt agaaggcctg gggaatggcg gtgttgggct
     1381 tgtggctgcc ggccggcgac acgccctcgt acttgaaata gatgcgcgcg ggggtgtcca
     1441 gcgccttttc cagccgccgc gcccggacca acggcgacgg ccgccacagc ctcaacgcat
     1501 cgcgcaccgg ctcggggatg tcgatccagc gctcggtcga aacctcctgg gcgatgatcg
     1561 cgttggggaa gatgggcgcc agatcgtccg gcccgatggg ctgcatggtg ccgggatgaa
     1621 gcggcggcgg cagcggcacc ggcaggtcgg cggccaggtt gtaccaggcc ttgggcagct
     1681 tctcttccgg caggaagtac ttgatcgagt cggtcatcgt cggtcggttc ccctgttgtg
     1741 gcgttggccc atcggccccc ttttttagcc ccgccgcaaa aagccagcca ccccgaattt
     1801 ttcctcttgc acacccctcc agttcgccct ataaagccgg cctccac
//
LOCUS       DATIKR010000745         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_11184, whole genome shotgun sequence.
ACCESSION   DATIKR010000745 DATIKR010000000
VERSION     DATIKR010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11184"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VLL76_11750"
     CDS             <1..569
                     /locus_tag="VLL76_11750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NifB/NifX family molybdenum-iron cluster-binding
                     protein"
                     /protein_id="HSV30228.1"
                     /translation="RHCRQCRADAVGMLGEDLSQDFTMDKIADAVAYDPEPRRLYREV
                     VERERADRQQAAEVACAGLAATVAPPKLVAVCTKGGGRINQHFGHATEFQVYEVDQAG
                     VRFVGHRKADNYCLGGYGDDDKLDGILEVLAGIEAVFVSKIGRCPKQDLAKAGIAAID
                     QYPFDYIETAVASWYADTFGDQLCDATA"
     gene            588..782
                     /locus_tag="VLL76_11755"
     CDS             588..782
                     /locus_tag="VLL76_11755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013029021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSV30229.1"
                     /translation="MAYQINADECTSCGACELDCPTGSIAEKGGTYVIKAKTCTECDG
                     DDPKCVELCPVENCITLIAA"
     gene            796..1062
                     /locus_tag="VLL76_11760"
     CDS             796..1062
                     /locus_tag="VLL76_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen fixation protein NifZ"
                     /protein_id="HSV30230.1"
                     /translation="MHALETELDGAPVFEPGDKVRALRAVRNDGTYPGVPMGGYLLKG
                     GEIGYVKSVGTYLNRYWIYAVDFVEPGIKIGMRGGELEDLEDRS"
     gene            1059..1274
                     /gene="nifT"
                     /locus_tag="VLL76_11765"
     CDS             1059..1274
                     /gene="nifT"
                     /locus_tag="VLL76_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009399 - nitrogen fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative nitrogen fixation protein NifT"
                     /protein_id="HSV30231.1"
                     /translation="MKVTLRKKPDHYEIYVAKKDLEEKIIHMEPGGPWGVVVTIGNGW
                     KFKMPDMPADTPLPITVDARKLGDEED"
     gene            1280..>1923
                     /locus_tag="VLL76_11770"
     CDS             1280..>1923
                     /locus_tag="VLL76_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HSV30232.1"
                     /translation="MSDPRALLADLGAQVAAGRLIPYLGAEVLTIGGAEPPVPVGARE
                     LSHHLCAKVAVPGRIRNNLWHTAQYIESFRHRVTLDRLMADFFKPVPAPTPLHRWLGT
                     LDRLPLIVDTWYDGAMRKALEHRADWGQIQGASKARRLAEAPWVRAYDAAGGECPEAA
                     AEGWNTLLYKPHGAAQPAGDVLASDADYVEVLTDIDIQTPIPQAVQERRMGRGFL"
BASE COUNT          336 a          664 c          648 g          275 t
ORIGIN      
        1 tgcgccactg ccgccaatgc cgcgccgacg ccgtcggcat gctgggcgag gatttgtcgc
       61 aggacttcac catggacaag atcgccgacg cggtcgccta cgaccccgag ccgcgacggc
      121 tgtaccgcga ggttgtcgag cgcgagcgcg ccgaccgcca gcaggccgcc gaggtcgcct
      181 gcgccggcct ggccgcgacc gtcgccccgc ccaagctggt ggccgtgtgc accaagggcg
      241 gcggccgcat caaccagcat ttcggccacg ccaccgagtt ccaggtctac gaggtcgatc
      301 aggctggcgt gcgcttcgtc ggccaccgca aggcggacaa ttactgcctg ggcggttatg
      361 gcgacgacga caagctggac ggcatcctgg aggtgctggc gggcatcgag gcggtgttcg
      421 tctcgaaaat cggccgctgc cccaagcagg atctggccaa ggccggcatc gccgccatcg
      481 accaataccc cttcgactac atcgagactg cggttgcgtc ctggtacgcc gacaccttcg
      541 gcgaccaact gtgcgacgcc accgcctgac ccagaggaga gacagccatg gcctatcaga
      601 tcaacgccga cgaatgcacc tcctgcggcg cctgcgaact cgactgcccc accggctcga
      661 tcgctgaaaa gggcggcacc tacgtcatca aggccaagac ctgcaccgag tgcgacggcg
      721 acgacccgaa atgcgtcgag ctgtgcccgg tcgagaattg catcaccctg atcgccgcct
      781 gaccggaggc cgcccatgca cgcgctggag acggaactgg acggcgcccc ggtgttcgag
      841 ccgggcgaca aggtgagggc gctgcgcgcg gtgcgcaacg acggcactta tcccggcgtg
      901 cccatgggcg gctatctgct gaaggggggc gagatcggct acgtcaagtc ggtcggcacc
      961 tacctgaacc gctactggat ctacgccgtc gacttcgtcg agcccggaat caagatcggg
     1021 atgcgcggcg gtgaactcga ggacttggag gaccggtcat gaaagtgacg ttgcgcaaga
     1081 agcccgatca ttacgagatc tacgtcgcca agaaggacct tgaggagaag atcatccaca
     1141 tggagccggg cggcccgtgg ggcgtggtcg tcaccatcgg caacggctgg aagttcaaga
     1201 tgccggacat gccggccgac acgccgctgc ccatcacggt ggacgcccgc aagcttggcg
     1261 acgaggagga ttgacgccga tgagcgatcc ccgcgccctt ctcgccgacc ttggcgccca
     1321 ggtggccgcc ggccgcctga tcccctatct gggggccgag gtcctgacca tcggcggtgc
     1381 cgagccgccg gtgccggtgg gagcgcgcga attgtcgcac catctgtgcg ccaaggtggc
     1441 ggtgcccggc cgcatccgca acaacctgtg gcacaccgcg caatacatcg agagcttccg
     1501 ccatcgcgtc acgctggacc ggttgatggc ggatttcttc aagccggtgc cggcgccgac
     1561 gccgctgcac cgctggctgg ggacgctgga ccgcctgccg ctgatcgtcg acacctggta
     1621 tgacggcgcc atgcgcaagg cgctggagca ccgcgccgat tggggccaga tccagggcgc
     1681 cagcaaggcc cgccgcctgg ccgaggcgcc gtgggtgcgg gcctatgacg ccgccggcgg
     1741 cgaatgcccc gaggccgccg ccgagggctg gaacaccctg ctctacaagc cgcacggcgc
     1801 ggcgcaaccg gcgggcgacg tgctggcctc ggacgccgat tacgtcgagg tgctgaccga
     1861 catcgacatc cagaccccca ttccccaggc cgtccaggag cgccgcatgg gccggggctt
     1921 cct
//
LOCUS       DATIKR010000746         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_229502, whole genome shotgun sequence.
ACCESSION   DATIKR010000746 DATIKR010000000
VERSION     DATIKR010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229502"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2145
                     /locus_tag="VLL76_11775"
     CDS             <1..>2145
                     /locus_tag="VLL76_11775"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HSV30233.1"
                     /translation="DEIKNGLFYFRETLFDTVPRVYRNLERALDTVYGDEGGSQAVPV
                     PRLLRFGSWIGGDRDGNPYVTHDVTALAVRLQSREVLKRYRRLLEEMALLLTHSSTLV
                     KPSDEFLRRMEADADVMPDVLGGNPNRFAQEPYRLKLHLMHHRLGRMVKRLEALLNHQ
                     PDPGTAGCYGSEADFLADLNSIRDSLVSHGDANLADAELKDLIVLVETFGFFLAELDI
                     RQESTRHTEAVAELFRVAPNLPDYESLDEDGRCQALAELLSHGGTPLMYCDVLSDATR
                     ETLTVLRTMAELRREISPRVFGSYVISMTHHASHILEVMFLASFAGLCGRGSDGSWHC
                     DIRVAPLFETIEDLTHIEPVLNRLLDLPAYRALLEASGNLQEVMLGYSDSCKDGGILA
                     SGWSLYQAQKTITRATAKRGIQCRLFHGRGGTVGRGGGPTHDAIMAQPPGTLTGEIKF
                     TEQGEVLSAKYSNAETAVYELTMGVTGLLKASRCMTVECTPDPADFVAVMDELAKLGE
                     GSYRGLTDHTPGFIDYFYEATPVSEIALLNIGSRPSHRAKADRSKYSVRAIPWVFGWG
                     QSRQTLPGWFGLGAALATWRGDDPKRLDLLRRMYREWPYFRALLSNSQMSLSKSELSI
                     AHEYARLCDDPDVAERVFGLIAAEQRLTMAEILAVSEMDEMMADNPKLALSLARRNPY
                     LDPINHIQVAALRRWRHGAEDDRAEWLTPLLR"
BASE COUNT          348 a          767 c          684 g          346 t
ORIGIN      
        1 aggacgagat caagaacggc ctgttctatt tccgcgagac gctgttcgac accgtgccgc
       61 gcgtctatcg caacctcgag cgcgcgctcg acaccgtcta tggcgacgag ggcggctccc
      121 aggcggtgcc ggtgccgcgc ctgttgcgct tcggctcgtg gatcggcggc gaccgcgacg
      181 gcaatcccta tgtcacccac gacgtcacgg cgctggcggt gcggctgcaa tcgcgcgagg
      241 tgctgaagcg ttatcgccgc ctgctcgagg aaatggcgct gctgctgacc cattcctcga
      301 ccctggtcaa gccgtccgac gagttcctgc gccgcatgga ggccgatgcg gacgtgatgc
      361 ccgacgtgct gggcggcaac cccaaccgct tcgcgcagga accctatcgc ctcaagctgc
      421 atctgatgca ccaccgcctc ggccgcatgg tcaagcggct ggaggcattg ctcaaccacc
      481 agcccgatcc cggcacggcc ggctgctacg ggtccgaggc ggacttcctg gccgacctca
      541 attccatccg cgattcgctg gtcagccatg gcgatgccaa cctggccgac gccgagttga
      601 aggacctgat cgtgctggtc gagaccttcg gcttcttcct ggccgagctg gacatccgcc
      661 aggaatccac ccgccacacc gaggcggtgg ccgagctgtt ccgcgtcgcg cccaacctgc
      721 cggactacga atcgctggac gaggacggcc gctgccaggc cctggccgag ttgctgtcgc
      781 atggcggcac gccgctgatg tattgcgacg tgctgtcgga tgccacgcgc gagaccttga
      841 ccgtgctgcg caccatggcc gagttgcggc gcgagatcag cccgcgcgtg ttcggcagct
      901 acgtcatctc catgacccac cacgccagcc acatcctgga agtgatgttc ctggccagct
      961 tcgccggcct gtgcggccgc ggctcggacg gcagctggca ttgcgacatc cgggtggcgc
     1021 cgctgttcga gaccatcgag gacctgaccc acatcgagcc ggtgctcaac cgcctgctcg
     1081 acctgccggc ctatcgcgcc ctgctggagg cgtcgggcaa tctgcaggaa gtgatgctgg
     1141 gctattccga ttcctgcaag gacggcggca tcctggcctc gggctggagc ctgtaccagg
     1201 cccagaagac aatcacgcgg gcgaccgcca agcgcggcat ccaatgccgc ctgttccacg
     1261 gtcgcggcgg caccgtcggc cgtggcggcg ggccgaccca cgacgccatc atggcgcagc
     1321 cgcccggcac cctgaccggc gagatcaagt tcaccgaaca gggcgaggtg ctgtcggcca
     1381 agtattccaa cgccgagacc gccgtctacg aactgaccat gggcgtcacc ggcctgttga
     1441 aggccagccg ctgcatgacg gtggaatgca cgcccgaccc ggccgatttc gtcgcggtga
     1501 tggacgaact ggcgaagctg ggcgagggca gctatcgcgg cctgaccgat cacacccccg
     1561 gcttcatcga ctatttctac gaagccaccc cggtcagcga gatcgcgctg ctcaacatcg
     1621 gctcgcggcc gtcgcaccgg gccaaggccg accgctcgaa atactcggtg cgcgcgatcc
     1681 cgtgggtgtt cggctggggc cagtcgcgcc agaccctgcc gggctggttc ggccttggcg
     1741 ccgccttggc cacctggcgc ggcgacgatc ccaagcgcct ggacctgctg cgccgcatgt
     1801 accgggaatg gccgtatttc cgcgccctgc tgtccaacag ccagatgtcg ctgagcaagt
     1861 ccgagctgtc catcgcccac gaatacgccc gcctgtgcga cgaccccgac gtcgccgaac
     1921 gggtgttcgg cctgatcgcc gccgagcagc gcctgaccat ggcggaaatc ctggcggtgt
     1981 cggaaatgga cgagatgatg gccgacaacc ccaagctcgc cttgtcgctg gctcgccgca
     2041 acccctatct cgaccccatc aaccacatcc aggtcgccgc cctgcggcgc tggcgccacg
     2101 gcgccgagga cgaccgcgcc gaatggctga cgccgctgct gcgct
//
LOCUS       DATIKR010000747         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_84301, whole genome shotgun sequence.
ACCESSION   DATIKR010000747 DATIKR010000000
VERSION     DATIKR010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84301"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..453
                     /locus_tag="VLL76_11780"
     CDS             145..453
                     /locus_tag="VLL76_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30234.1"
                     /translation="MARNGNEEKVRLLRAVAFHIHKKMPAAEALNACFEAEGRGGRHR
                     QWRQAGAVLEAEGFVPALLAAELVGEEAATVLTVLESAGDHRLLSNALNALAEYCERQ
                     "
     gene            450..1601
                     /locus_tag="VLL76_11785"
     CDS             450..1601
                     /locus_tag="VLL76_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30235.1"
                     /translation="MIRPTAVAALLLAWAAPAWASCDVLAARVDALPGEGAALLRSYD
                     DWPEPALATAAFTYDNALAAIALVACDRPRQARRIGEALLLAAVNDRAGAEGRLRNAY
                     RAGPQPDVPPPNGWWDAARGQWVEDAYQVGTATGNVAWAGLALVTLAEVTGDKRFRAG
                     ADRLAEWVARHAADRRGGFSGGIHGGEGAAIRLTWKSTEHNVDVAALFGRLDRGEART
                     ARNFVASQFDGGHFWTGTLPDGVTVNRATSGLDAQLWPLLLEGAPSAWRKALDHAERA
                     HGVDGGFDFNDDRDGLWVEGTAQAALAYRAIGRGDRAALLLKQVRAQAAPGGYLYATR
                     EPRITTGLAIGPDSTTADFFYYRRPHLGATAWAVLAERGWNPFTGKRVD"
     gene            complement(1605..1913)
                     /locus_tag="VLL76_11790"
     CDS             complement(1605..1913)
                     /locus_tag="VLL76_11790"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV30236.1"
                     /translation="MDKRDTVRQRASGTGMVQLRDIPIPATLVDVSPGGCKLRLAHEI
                     TELVGPLLPCDTRIAFFGLEYDATALWLANGLLGCRFPEQLPLDHVAALMSGGRYPLQ
                     "
     gene            complement(2032..>2233)
                     /locus_tag="VLL76_11795"
     CDS             complement(2032..>2233)
                     /locus_tag="VLL76_11795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSV30237.1"
                     /translation="LQERDELIAAIALAEGKQDYQTRHELREILEETEEHIDWLETQL
                     SLIDSMGLANFLQSAAGGVEGS"
BASE COUNT          319 a          756 c          804 g          354 t
ORIGIN      
        1 ccatgttgac ccccatgcgg gctgacggat ggcttatgag atcgctccga tgaactcgtt
       61 cgtcccgggt gcatagggtt gatttgccca tcgtggcagg aacggtgtat tgctgctgcc
      121 tcgaacggat gaaggacgga gtgaatggcc cgcaacggca acgaggaaaa ggttcggctt
      181 ctgcgggcgg tggccttcca catccacaag aagatgccgg cggccgaggc tctgaacgcc
      241 tgcttcgagg ccgaggggcg cggcgggcgg caccgccagt ggcgccaggc cggcgccgtg
      301 ctcgaggccg agggcttcgt gcccgccttg ctggccgccg aactggtggg agaggaggcc
      361 gcgaccgtgt tgacggtgct cgaatccgcc ggcgaccacc gcctgctgtc caacgcgctc
      421 aacgccctgg ccgagtattg cgaacggcaa tgatccgccc cacggccgtc gccgcgctgc
      481 tgctggcctg ggccgccccg gcctgggcgt cgtgcgacgt gctggcggct cgggtggatg
      541 cgctgccggg ggagggagcg gcgttgctgc gctcctatga cgactggccc gaaccggcgc
      601 tcgccaccgc cgccttcacc tacgacaacg ccctggccgc catcgccctg gtggcgtgcg
      661 accgcccgcg ccaggcccgc cgcatcggtg aggcgcttct gctggccgcc gtgaacgacc
      721 gtgccggcgc cgagggccgg ttgcgcaacg cctaccgtgc cgggccgcag ccggatgtgc
      781 cgccgcccaa cggctggtgg gacgcggcgc gcgggcaatg ggtcgaggat gcctaccagg
      841 tgggcaccgc caccggcaat gtggcgtggg ccgggctggc gctggtgacg ctggccgagg
      901 tcaccggcga caagcgcttc cgggccggcg ccgacaggct ggcggaatgg gtggcacgcc
      961 acgcggccga ccggcgcggc ggcttcagcg gcggcatcca tggcggcgag ggggctgcga
     1021 tccgcctgac ctggaaatcc accgagcaca atgtggacgt ggccgccttg ttcggccgcc
     1081 ttgatcgtgg tgaagccagg acggcgcgga acttcgtcgc ctcgcaattc gacggcggtc
     1141 acttctggac cggcacgctg cccgacggtg tgactgtcaa ccgcgccacc tcgggcctgg
     1201 acgcgcagtt gtggccgctg ttgctggagg gtgcaccttc ggcctggcgc aaggcgctgg
     1261 accatgccga gcgtgcccac ggcgtggacg gcggcttcga cttcaacgac gaccgcgatg
     1321 gattgtgggt cgagggcacc gcccaggcgg cgctggccta tcgcgccatc ggccgtggcg
     1381 accgcgcggc cctgttgctg aagcaggtcc gcgcccaggc ggctccgggg ggatacctgt
     1441 atgcgacgcg cgagccgcgc atcaccaccg gcctcgcaat cggtcccgac agcaccaccg
     1501 ccgacttttt ctactaccgc cgcccccatc tgggcgccac cgcctgggcg gtgctggccg
     1561 agcgcggctg gaacccgttc accggcaaac gggtggactg agcgctattg caggggatag
     1621 cggccgcccg acatcagcgc ggcgacgtgg tcgagcggca gttgctcggg gaagcggcag
     1681 cccagcaggc cgttggcgag ccacagcgcg gtggcgtcgt attccagccc gaagaaggcg
     1741 atgcgggtgt cgcagggcag cagcgggccg accagttcgg tgatctcgtg ggccagccgc
     1801 agcttgcagc cgccgggcga gacgtccacc agggtggccg gaatggggat gtcgcgcagt
     1861 tggaccatgc ccgtgccgga agcgcgctgc cgcacggtgt cgcgtttgtc catactgccc
     1921 agcccatcgc cgcccaatcc acggccattc tagcttgcct tccattcgga tgcccgccgg
     1981 gcgaggggcg agggcggcgc agccaatgat ttcccttggg tttgtgcgct tctacgatcc
     2041 ctccacgccc cccgccgccg attgcaggaa gttggcaagc cccatggaat cgatcagcga
     2101 caactgggtt tccagccagt cgatgtgctc ctcggtttct tccaggatct cgcgcaattc
     2161 gtggcgggtc tggtaatcct gcttgccctc ggcgagggcg atggcggcga tcaattcgtc
     2221 gcgctcctgc aat
//
LOCUS       DATIKR010000748         3607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_72355, whole genome shotgun sequence.
ACCESSION   DATIKR010000748 DATIKR010000000
VERSION     DATIKR010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3607
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72355"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VLL76_11800"
     CDS             <1..762
                     /locus_tag="VLL76_11800"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV30238.1"
                     /translation="RQTPPPAVSLGFPDSSAVLACRGLTVQAPSGGGKVLLRNVSFHL
                     DPAETLAVVGPSGAGKTTLCRALLGVLTPLAGSVRFGGADLTQWRAGASALAVGALPQ
                     RLEFLPGSVRDNIGRFRDDVDDAAILRAAQRAGVHEVILALPQGYHTPLAPDGAPLSA
                     GHAQLLGLARALFGEPCLLVLDEPNMALDGDGAGALANALAEAKGWGATIILSTHTPG
                     LVARADKVLSLRAGQVASFGPPAQATPVRAGGLAG"
     gene            759..2108
                     /locus_tag="VLL76_11805"
     CDS             759..2108
                     /locus_tag="VLL76_11805"
                     /inference="COORDINATES: protein motif:HMM:TIGR01843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV30239.1"
                     /translation="MTATTAFPIQPAELGPRLRSSMRLGLWVCGAFFGLFGIWAAMAP
                     LAQGVTAAGSVSPDGSRRTVQHLEGGIISVLHIREGDRVAEGQPLIELADTRSQAEHS
                     ILRGRLLAHLAERARLEAERDGAATISFPARLAEAAQDPLDVSVAQLMAAQELMFTSR
                     RNALLTQRDILDQRLRQLARQVEGYQAQIASANRQSVLIKEEVETVDLLVRQGLERKP
                     RLLSLQRTQAELDGMRGKAVAAIAEAEEAMGQTRLEMVRLDVDRLEEVNGALADLEEK
                     LAEAERAVEAARDVLDRVVIRAPVSGSVLNLRTRTIGGVIGPGEPILELVPDKERLII
                     DARVSPLDIDAMHPGLPATVVLTAYPRRTTPTIAGRVAWVSADRQTDKAAAGEKAESY
                     YMARIEVDGDALAALPDSVAMVPGMPVGVMIKTDERTLLDYLLDPLFDAAREGLSDE"
     gene            2453..2830
                     /locus_tag="VLL76_11810"
     CDS             2453..2830
                     /locus_tag="VLL76_11810"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HSV30240.1"
                     /translation="MLAALLAAPFPAPAADRLAGPYDAQVLRVIDGDTFEARVPVWLG
                     LDMTVRIRLRGVDTPELHGPCPAQAQAAKAMLSHLLATGPVRLTDITHDKYAGRVDAT
                     VVLSDGRDVGKVMEGAGMTMPCR"
BASE COUNT          576 a         1264 c         1223 g          544 t
ORIGIN      
        1 cgccagacgc cgccgcccgc cgtgtccctg ggattccccg acagcagcgc ggtcctggcc
       61 tgccgaggcc tgaccgtgca ggcgccatcc ggtggcggga aggtgctcct gcgcaacgtg
      121 tccttccatc tcgatccggc ggagactctg gcggtggtcg ggccgtcagg cgccggcaag
      181 accacattgt gccgggcatt gctcggcgtt ctgacgccgc tggccggcag tgtccgcttt
      241 ggcggggccg atctgacgca gtggagggcc ggcgcctcgg ccctggccgt gggtgccctg
      301 ccgcagcggc tggagttcct gcccggcagc gtgcgcgaca atatcggccg gttccgcgac
      361 gacgtcgacg acgccgcgat cctgcgcgcc gcccagaggg ccggcgtgca cgaggtcatc
      421 ctggccctgc cccagggtta ccacacgccc ctggcgcccg acggcgcccc cctgtccgcc
      481 ggccacgccc agttgcttgg gctggcccgc gccctgttcg gggagccgtg cctgctggtg
      541 ctcgacgagc ccaacatggc gctggacggc gatggcgcgg gcgccctggc gaacgctctt
      601 gccgaggcca agggatgggg agcgaccatc atcctgagca cgcacacgcc gggcctggtc
      661 gcgcgggccg acaaggttct gtccctgcgc gccgggcagg tggcgtcctt cggcccgccg
      721 gcccaggcca ccccggtcag agcgggaggg ctggccggat gaccgccacc accgccttcc
      781 ccatccaacc cgctgaactt gggccgcgtc tgcggtcatc catgcgcctg ggcctatggg
      841 tttgcggcgc cttcttcggc ctgttcggca tttgggccgc catggcgccg ctggcccagg
      901 gggtaaccgc cgccgggtcg gtcagccccg acggcagtcg ccgcaccgtg cagcatctcg
      961 aaggcggcat catctcggtc ctgcacattc gcgagggcga tcgcgtggcc gaagggcagc
     1021 cgctgatcga actcgccgac acccgctccc aggccgagca ctccatcctg cgcggccgcc
     1081 tgctggccca tctggccgag cgggcgcggc tggaggcgga acgtgacggc gccgccacca
     1141 tctccttccc cgcccgcctg gcggaggcgg cgcaagatcc cctcgacgtc tcggtggcgc
     1201 agttgatggc cgcacaggag ctgatgttca cctcgcgccg gaacgccctg ttgacgcaac
     1261 gcgacatcct ggaccagcgc ctgcgccagc ttgcccgcca ggtggagggc taccaggccc
     1321 agatcgccag cgccaaccgc cagagcgtgc ttatcaagga ggaggtcgag accgtggatc
     1381 tgctggtccg ccaggggttg gagcgcaagc cgcgcctgct gtcgctgcag cggacccagg
     1441 cggaactgga tggcatgcgc ggcaaggcgg tggccgccat cgccgaagcg gaggaggcca
     1501 tggggcagac ccgcctggag atggtgcgcc tggacgtcga tcgcctcgag gaggtcaacg
     1561 gcgccctggc cgacctggag gagaagctgg cggaagccga acgcgcggtg gaggccgccc
     1621 gcgacgtgtt ggaccgggtg gtcatccgtg cacccgtcag cggatccgtc ctcaacctgc
     1681 gcaccaggac catcggcggg gtcatcggcc cgggggaacc catcctcgaa ctggtgccgg
     1741 acaaggagcg gctgatcatc gacgcccgcg tctcgccgct ggatatcgac gccatgcacc
     1801 ccggcctgcc ggccacggtg gtgctgacgg cctatccgcg ccgcaccacg ccgaccatcg
     1861 ccggccgggt cgcgtgggtg tcggccgacc gccagacgga caaggcggcg gcgggcgaga
     1921 aggccgaaag ctactacatg gcccgcatcg aggtggacgg cgacgccctg gccgccctgc
     1981 ccgacagcgt cgccatggtg cccggcatgc cggtcggggt gatgatcaag acggacgagc
     2041 ggacgctgct cgactacctg ctggatccgc tgtttgatgc cgcgcgcgag ggcctgagcg
     2101 acgaatagcc ctttccggtg gattatctgc cgcgaaacac gctatgatat cccccgtgcc
     2161 cgcccatgtc gcgcgggagc ggagcgagcc ggtgttggag caccgacccg cccctgacca
     2221 caaccctgtg atacggagtc acaaggaaat ggctaacgct gactatagcc caaccgttcc
     2281 gatttcacca acgccgccgt gtgcacgcgg tcgcgtgtgg atctgggcgg ccgggggctg
     2341 aagggctggc gcgggtgggt cgggctatcc ggcttgccgc tctggcccgg cccattcgcc
     2401 gcgccgccct tcggcccctg gccgctttca accaaccatg tggtggttgt tcttgcttgc
     2461 cgccctgctg gcggccccgt ttcccgcgcc cgccgccgac cggctggccg gcccctatga
     2521 cgcccaagtg ctgcgcgtga tcgacggcga caccttcgag gcgcgcgtcc cggtgtggct
     2581 gggcctggac atgaccgtcc gcatccgcct gcgcggcgtc gacacccccg aactccacgg
     2641 cccctgcccc gcccaggccc aagccgccaa agccatgctg tcccacctgc tcgccaccgg
     2701 ccccgtgcgc ctgaccgaca tcacccacga caaatacgcg ggccgcgtgg acgccacggt
     2761 cgtgctgagc gatgggcggg atgtgggcaa ggtgatggag ggggcgggga tgaccatgcc
     2821 ttgccggtag caatcaaggg attgccgaac cggcctgttc catggcggcg tggaacttca
     2881 gcacaccgcc cggcaaggca gggcggcgcg ggccgacggg gtgagcagcg aattggcagc
     2941 caaagcgctg cgcccccccc ggtcagaaag gacctgttga acgagagctt cggaaaaatc
     3001 aggagcgagc aaggcaagct catcgctgtt gatttggcga tccggcggga ggggcggagg
     3061 tagactcacc tacccgccag cgctaccatt gcgattggct agaccatgca acggagagcg
     3121 atatgcctta cgtcaagtgc ggttgcggaa cccgcgttct cgtgaccaca acgctacatg
     3181 gatggaccat tcattgggat tccgcagcta catcgggctg caaggacatt caaaataagc
     3241 ttaaagaaaa aggcacgctt catggcgacg aaatggtctg cgacgaaata aagcgattag
     3301 cggccgagct tatgagatca ccgcggtaag gacagcacga ccatccacgc accctatcga
     3361 agcgccatat ccgtcggccg gaagaccagc cgccagcccg gatcatccgc atgcccaaca
     3421 tctggggtct taactggctg atgcggatta acggtttgac cccttgccgt ttccgcgtct
     3481 gaggcggcga cgttccaact ccgcttctga cttccgccgc tcccactcct ggagacccgc
     3541 cgcaccgccg gcactgatgg aaaccgccgg tgcgacgacg gaaagggcgg tgccgcccgt
     3601 cagaagc
//
LOCUS       DATIKR010000749         2405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_192293, whole genome shotgun sequence.
ACCESSION   DATIKR010000749 DATIKR010000000
VERSION     DATIKR010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192293"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..917)
                     /locus_tag="VLL76_11815"
                     /pseudo
     CDS             complement(1..917)
                     /locus_tag="VLL76_11815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938913.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase"
     gene            complement(926..1783)
                     /locus_tag="VLL76_11820"
     CDS             complement(926..1783)
                     /locus_tag="VLL76_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019577405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HSV30241.1"
                     /translation="MNKQTTPFKSNKPPVWFITGCSSGFGLELARQAIERGYRTVVTA
                     RDLGRLRGYVASDQVLLLQLDVTQPDQVAAAVKTAEARFGGIDVLVNNAGFGYFAAIE
                     EGDAAEVRKMFEVNVFGLTAMVQAVLPGMRKRRAGCIVNLSSVAGLRGMPALGQYHAT
                     KFAVEGLSEALRREVEPLGIKVMVVNPSGFRTDWAGRSANESEHPIEDYLATAGKVRL
                     AVRASSGKQPGDPVRAVKAIIEAVASGHPPHHLLLGNDAFEGAMAKVDELRKDFAAGE
                     TVARGAEFP"
     gene            complement(1801..>2405)
                     /locus_tag="VLL76_11825"
     CDS             complement(1801..>2405)
                     /locus_tag="VLL76_11825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007176412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV30242.1"
                     /translation="ACTASKRFIVVESLADRFLDKFALALGNFRAGDPLDARTTLAPL
                     SSERALATLLEQVDRAVAAGARVIMGGARIDRAGAFMQPTILTNIDAANPAYKEEFFG
                     PVALFFRVTNADAAVALANDSLFGLGGSVFTRDIERGKQVARRIDTGMVFINSAAVSS
                     PELPFGGVKHSGYGRELGRMGIQEFVNKKLIQSGHTAVPV"
BASE COUNT          403 a          808 c          788 g          406 t
ORIGIN      
        1 gtcagctgcg aaggccaggg cctcggccat atcgcgccgg ttgccgacga aggagccgcg
       61 gatggtgatg cagttggcca ccacgtcgaa cagcggcgtc gggaactcac ccgggggatg
      121 cccacctgca cacacgtgcc gtgcttgcgc gtcatgccga taccctgctt gaaaaccgcc
      181 agtgacggcg cggtgatcag cacaccgtgg gcaccgcccg cggtgacctt ccgaaccatt
      241 gccgccgggt cgccattcct ggcgtttact gcggcatcgg cgccaagccg ccgggcgtgt
      301 tcgagcttgc cctcgtcgat gtcgaccgcg cacacctgca gtcccatggc cttggcgtat
      361 tgcacgccca ggtgtcccag gccgccgatg cccgagacga ccacccattg cccgggccgg
      421 gcctgcgttt ccttcagccc cttgtacgag gtgatgccgg cgcagatcaa cggcgcggca
      481 tcgcgtgcgg ccagtcctcc cgggatgtgg gcgacgtaat tcgggtcggc gacgatgaac
      541 tcggcaaagc cgccgttctt cgtgtagccg ccgaattgcg cctcggcgca cacaggttcc
      601 tgcgccgcca ggcagaactc gcaatggcca caggctgaag agagccaagg cacgccgaca
      661 cggtcaccct ccttcaccgc cgtgacgccg gtgccgagtg ccgtgacgat gccgatgcct
      721 tcatgccccg gcgtgaaggg cagtgcgggc ttcagcggtc agtcgccacc ggcagcatgc
      781 tggtcggtgt ggcagacccc gcaggcctcg gtcctgacga ggatctgccc ggcggcgggc
      841 gtgggaatgt cgagttcctt cagcaccaga ggttggccga attgttcgac ctgagccgct
      901 tgcatcttgc gtgtcatgcc atctcctacg ggaattcggc gccacgcgcc actgtctcgc
      961 ccgcagcgaa gtccttacgt aactcgtcga ccttggccat cgcgccctcg aaggcgtcgt
     1021 taccgagcag caggtgatgc ggcggatggc ccgacgccac cgcctcgatg atggccttca
     1081 ccgcacgcac gggatcgcca ggctgcttgc ctgacgatgc gcgcaccgcc aggcgcactt
     1141 tgccggcggt ggccaggtag tcctcgatcg ggtgctcact ctcgttggcc gagcgcccgg
     1201 cccagtcggt gcgaaagccg ctcggattga ccaccatcac cttgatgccc agcggctcga
     1261 cctctcgccg caaagcctct gacaagcctt cgacggcaaa cttggtcgcg tggtactggc
     1321 ccagcgccgg catgccgcgc agaccggcca ctgacgacag gttgacgatg cagccggcgc
     1381 ggcgcttgcg catgccgggc agcacggcct ggaccatggc ggtcaggccg aacacgttaa
     1441 cttcgaacat cttgcgcacc tcagcggcat cgccctcctc gatggcggcg aagtagccga
     1501 acccggcgtt gttcaccaac acatcgatgc ctccgaagcg ggcttcggcc gtcttcacgg
     1561 ccgcggcgac ctggtccggc tgcgtgacgt cgagctgcag caagaggacc tgatcactcg
     1621 caacatagcc tcgcagtctg ccgagatcgc gggcggtcac caccgtgcgg tagccgcgtt
     1681 cgatggcctg cctggcgagt tccaggccga agccggagga acagccggtg atgaaccaga
     1741 ccggaggttt attggatttg aaaggcgtgg tttgtttgtt catggggact tcctttgcgg
     1801 tcagaccggc acggcggtgt ggccgctttg aatgagcttc ttgttgacga actcctgaat
     1861 gcccatgcgg cccagctcgc ggccgtagcc ggagtgcttg acgccgccaa acggcagttc
     1921 gggggacgac accgccgcgc tgttgataaa taccatgccg gtatcgatgc gccgcgcgac
     1981 ctgcttgccg cgctcgatgt cccgagtaaa caccgagccg cccagcccga acagcgaatc
     2041 gttggccagc gccaccgcgg catcggcgtt ggtgacccgg aagaacagcg ccaccgggcc
     2101 gaagaactct tccttgtagg ccggattggc ggcgtcgata ttggtcagga tggtcggctg
     2161 catgaaggcg ccagccctgt cgatgcgcgc gccgcccatg atcacgcggg cgcccgcggc
     2221 aaccgcgcgg tcgacctgtt cgagcagcgt ggcgagcgcg cgctcggacg acaacggcgc
     2281 cagcgtggtg cgcgcgtcga gcggatcgcc agcgcggaag ttgcccagcg ccagggcgaa
     2341 cttgtcgagg aaacggtcgg ccagcgattc aacgacgatg aagcgtttgg aagcagtgca
     2401 ggcct
//
LOCUS       DATIKR010000750         2275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59064, whole genome shotgun sequence.
ACCESSION   DATIKR010000750 DATIKR010000000
VERSION     DATIKR010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59064"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VLL76_11830"
     CDS             complement(<1..288)
                     /locus_tag="VLL76_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30243.1"
                     /translation="MHLLAAQPGTISDGSEAVDLGQTPGDVVILSAADTELACLAAAH
                     RRCEGFSLRLANLMRLAHHMSVDLYVEQVIEKARVVAVRLLGGRAYWPYGVE"
     gene            complement(292..1299)
                     /gene="cobW"
                     /locus_tag="VLL76_11835"
     CDS             complement(292..1299)
                     /gene="cobW"
                     /locus_tag="VLL76_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HSV30244.1"
                     /translation="MKRKVPATVITGFLGAGKTTLVRHLLANNQGRRIALIVNEFGDV
                     GVDGELLAACGVEGCREEDVIELANGCLCCTVADEFLPTMQALLDRADPPDHIVIETS
                     GLALPKPLVKAFHWPEIRSRVTVDGVVAVVDAAAFAAGRFADTPEMMAQPDHDNPLEE
                     VFEDQLACADMVLLNKADLVDGATLDGLHGELSDRLRAGVKVLPTQKGAVDPLVLLGL
                     SAAAEDDLASRPSHHDMEDGHDHDDFESFAVALPETADLDALEARLVAAIAAHDVLRL
                     KGFLAVPGKPARHVVQAVGTRIERYFDRPWKPGEERQSRLVVIGQKGLDRAAIEAIIL
                     G"
     gene            complement(1296..1808)
                     /gene="cobU"
                     /locus_tag="VLL76_11840"
     CDS             complement(1296..1808)
                     /gene="cobU"
                     /locus_tag="VLL76_11840"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HSV30245.1"
                     /translation="MSALPSTILVLGGARSGKSTYAEGLLAGRPALYLATGQAFDGEM
                     AERIRLHQGRRGPEWATVEEPLDIAALIDGADRPVLVDCLTLWISNLMHAGRDVDHAC
                     GELCEVLAAAAGPVVLVSNEVGLGLVPDNALARAFRDHQGRVNQRVAATCRRVAFVAA
                     GLPLILKDHP"
     gene            complement(1843..>2275)
                     /locus_tag="VLL76_11845"
     CDS             complement(1843..>2275)
                     /locus_tag="VLL76_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="HSV30246.1"
                     /translation="YEVSNHARPGGESRHNLTYWLGGDYVGIGPGAHGRLNGRALRQH
                     RAPDAWLEMVERQGHGTREDDALDPATRAEELVMMGLRLVDGIDAATFAAIAGRPLWD
                     VLDPNGLARMEDGGFVERSAAGLRVTPAGMLVLNAVTAELI"
BASE COUNT          338 a          790 c          823 g          324 t
ORIGIN      
        1 ctcgactcca tagggccaat aggcccgccc gcccagcagc cgcaccgcca ccacgcgcgc
       61 cttctcgatc acctgctcga catagaggtc caccgacatg tggtgggcca gacgcatcag
      121 attggcgagc cgcaggctga agccctcgca ccgccgatgc gccgccgcca ggcatgccag
      181 ctcggtgtcg gcggccgaca ggatgacgac gtcgcccggg gtctgcccca ggtcgaccgc
      241 ctcggaaccg tcggagatgg tgcccggctg ggcggcaagc aggtgcatca cctaccccag
      301 gatgatcgcc tcgatggcgg cgcggtcgag gcccttctgg ccgatcacca ccaggcggct
      361 ctggcgttcc tcgcccggtt tccacggccg gtcgaaatag cgctcgatgc gggtgcccac
      421 cgcctggacc acgtggcggg cgggcttgcc cggcaccgcc aggaagccct tgaggcgcag
      481 cacgtcgtgg gcggcgatgg cggcgaccag acgcgcctcc agggcgtcga ggtcggcggt
      541 ttccggcagc gcgacggcga agctttcgaa gtcgtcgtgg tcgtggccgt cttccatatc
      601 gtgatggctg ggccgcgatg ccagatcgtc ctcggccgcc gcgctaagac ccagcagcac
      661 cagcggatcg acggcgccct tttgcgtcgg cagcaccttg accccggcgc gcaggcggtc
      721 ggacagctct ccgtgcaggc cgtccagggt cgcgccgtcc accagatcgg ccttgttcag
      781 cagcaccatg tcggcgcagg ccaactggtc ctcgaacact tcctccagcg gattgtcgtg
      841 gtcgggctgc gccatcatct cgggcgtgtc ggcgaaacgc ccggcggcga aggcggcggc
      901 gtccaccacc gcgaccacgc cgtcgacggt gacgcgcgag cggatctcgg gccagtggaa
      961 ggccttgacc agcggcttgg gcaaggcgag gcccgaagtc tcgatgacga tgtggtcggg
     1021 cgggtcggcg cggtccagca gcgcctgcat ggtgggaagg aactcgtcgg cgacggtgca
     1081 gcacaggcag ccgttggcca actcgatcac gtcctcctcc cggcatcctt ccacgccgca
     1141 ggcggccagc aactcgccgt ccacgcccac gtcgccgaac tcgttgacga tcagggcgat
     1201 gcggcggccc tggttgttgg cgagcaggtg gcggaccagc gtggtcttgc cggcgcccag
     1261 aaagccggtg atgacggtgg cgggaacctt gcgcttcatg gatggtcctt gaggatgagg
     1321 ggaaggccgg cggcgacgaa tgccacccgg cggcaggtgg cggcgacgcg ctggttgacg
     1381 cggccctgat ggtcgcggaa ggcgcgggcc aaggcgttgt cgggcaccag gccgaggccg
     1441 acttcgttgg acaccagcac caccggcccg gcggcggcgg ccagcacctc gcacaattcg
     1501 ccgcaggcat ggtccacgtc gcggccggca tgcatgaggt tcgagatcca cagggtcagg
     1561 cagtccacca gcaccggccg gtcggcgccg tcgatcagcg cggcgatgtc cagcggctcc
     1621 tcgacggtag cccattccgg cccgcgacgg ccctggtgca ggcggatgcg ctcggccatc
     1681 tcgccgtcga acgcctggcc ggtggcgagg tacagcgccg gccggccagc cagcaggccc
     1741 tcggcatagg tgctcttgcc ggagcgggcg ccgccgagga cgaggatggt ggaaggcagt
     1801 gcggacatgg ccgctgtcct agcatgaaag cgcgcagccg cgctatatca gctcggccgt
     1861 caccgcgttc agcaccagca tgccggcggg ggtgacgcgc agcccggcgg cgctgcgctc
     1921 gacgaagccg ccgtcctcca tgcgggccag gccgttcggg tccagcacgt cccacagcgg
     1981 ccggccggcg atggcggcga aggtggcggc gtcgatgcca tcgaccagac gcaggcccat
     2041 catcaccaat tcctcggcgc gggtggcggg gtcgagcgcg tcgtcctcgc gggtgccgtg
     2101 gccctggcgt tccaccatct caagccaggc atcgggggcg cggtgctggc gcagggcacg
     2161 gccgttcagc cggccatggg cgccggggcc gatgccgacg taatcgccgc ccagccaata
     2221 ggtcaggttg tgccggcttt cgccgccggg gcgggcgtgg ttggagacct catag
//
LOCUS       DATIKR010000751         2252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_108195, whole genome shotgun sequence.
ACCESSION   DATIKR010000751 DATIKR010000000
VERSION     DATIKR010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108195"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VLL76_11850"
     CDS             complement(<1..208)
                     /locus_tag="VLL76_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008281896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis bifunctional protein
                     CbiET"
                     /protein_id="HSV30247.1"
                     /translation="MTPWLTVIGIGEDGLSGLSAAARALVEGAEVLVGGDRHLAMVPG
                     PAERHVWPSPFAGGRALLEGLRGRR"
     gene            complement(387..1010)
                     /locus_tag="VLL76_11855"
     CDS             complement(387..1010)
                     /locus_tag="VLL76_11855"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012213338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HSV30248.1"
                     /translation="MHDWIKDPAEIYRRSFATIRSEIDLDAMPADLRDLVVRVVHACG
                     MTEIVADMAWSDGAGAAGRAALQAGAPILVDAEMVAHGVIKARLPQANAVICTLNQPN
                     VPDLAREAGTTRSAMAVDQWLPLLDGAVVAIGNAPTALFRLLELIEAGAPKPAVILGF
                     PVGFVGAAESKEALLQSGLDFVTLRGRKGGSAMAAAAVNALAKDNEG"
     gene            complement(1887..>2252)
                     /locus_tag="VLL76_11860"
     CDS             complement(1887..>2252)
                     /locus_tag="VLL76_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin chelatase"
                     /protein_id="HSV30249.1"
                     /translation="GILVKRIYTWTDEAAAANPGIEFLKAPYLNDHPLVIDSFVERVE
                     EILRGENHMNCTLCKYREQVVGYEASVGAVQAGHHHHVRGIGTDGDHDHGHDHHHDHD
                     HDHHHHGHGHHHHHHHSHD"
BASE COUNT          326 a          757 c          821 g          348 t
ORIGIN      
        1 cccgccggcc gcgcaagcct tccagcaggg cgcgcccgcc ggcgaagggc gacggccaca
       61 cgtggcgctc ggccgggccg ggcaccatgg cgagatggcg gtcgccgccc accagcacct
      121 cggcgccctc gaccagggca cgcgcggcgg ccgacaaccc ggacaggccg tcctcgccga
      181 tgccgataac ggtgagccag ggggtcatgg gagcttcacc acggaggcac ggagacacgg
      241 agaaatcact atcaccgccg tcatgcgcgg gcttgacccg cgtatccacg tggggccgtc
      301 cggcagcgcg tgtggaccag ccgcgtggat ggccggatca agtccggcca tgacggtgga
      361 ggggatggtg gagtggttca aaaccttcat ccctcgttgt ccttcgccag ggcgttgacg
      421 gcggccgccg ccatggcgct gccgcccttg cggccgcgca gggtgacgaa gtccaggccc
      481 gattgcagca gcgcttcctt gctttcggcg gcgccgacga atcccaccgg gaagcccagg
      541 atcaccgccg gcttgggcgc gcccgcctcg atcagttcca acagccggaa cagggcggtg
      601 ggggcgttgc cgatggcgac caccgcgccg tccagcaacg gcaaccactg gtccaccgcc
      661 atggccgagc gggtggtgcc ggcctcgcgc gccagatcgg ggacattggg ttggttcagg
      721 gtgcagatca ccgcgttggc ctggggcagg cgggccttga tgacgccgtg ggcgaccatt
      781 tcggcgtcca ccaggatggg ggcgccggcc tgcaaggcag cgcggccggc ggcaccggcg
      841 ccgtcgctcc acgccatgtc ggcgacgatc tcggtcatgc cgcaggcgtg caccacccgc
      901 accaccaggt cgcgcaaatc ggcgggcatg gcgtcgaggt cgatctcgga gcggatggtg
      961 gcgaaggacc ggcgatagat ctcggccggg tccttgatcc agtcgtggat gtcgatgcgc
     1021 gcgcttgcgg tgacccccag gatccagccc tcctcggttt cggcgatctt gcgttcgacc
     1081 ggcgtcaggg tcgggtcgcc ggcgaacaat tcggccagcc ggccgtcgtc gaggccggcg
     1141 aagtgatgcg ccagggccac cacctgggcg cggtccttga tgtcgcccgt ggcgggcagc
     1201 atggacggat agacctcggc cagcacgatg cccgcctgcg gcaccgtcag cccggtctcg
     1261 aacggccaga cgcgggcatg ttcggccagc caggggtgga agcgcagctc gtgcaggcgc
     1321 gggatgccga ccagggtctg gccgccgacg ctgccggcat aggccagttg ccacaccggc
     1381 ttggggccgg aaatccgctg ctccgccagc cgcttctcgg gcaggccgac ctcgcgcggc
     1441 ttggtggtcg ccagcatctc gcccgcctgc gccggcgggc agccccagaa cggcgccgcc
     1501 ccgcccgaca ccgccttgtt caaggcagcg gcgattgcga agcggttgtt ggcgttgtcg
     1561 gcaccgtcgc ggatgtcggc cttcagccgg gtccacacgc ctttccagtc gcgcgcgccc
     1621 aggcgggcgg cgaagccggc ggggaagccg aaattgaagt cgaagccggc cagtaccctc
     1681 tggccgcgcg ccgccaggtc ggacagcaaa tcggccagct ctgccatggc ggcggcacgg
     1741 gtcggcgggt tcgagacgcg ctcggccccg ccgcgctcga cgcaggcgat ccagatgctg
     1801 tcggcgccgg tcttgggttt cgactcggcg ctccaatcca ccatcacata ggcgtcgaac
     1861 aggggttcgg cggacatgcc gaagcctcag tcgtggctgt ggtggtgatg gtggtgatga
     1921 ccgtggccgt ggtggtgatg gtcgtggtca tgatcatggt gatggtcatg gccgtggtca
     1981 tggtcgccgt cggtgccgat gccgcgcacg tggtggtgat ggccggcctg gacggcgccg
     2041 acgctggcct cgtagcccac cacctgctca cggtacttgc acagggtgca gttcatgtgg
     2101 ttctcgccgc gcaggatctc ttccacccgc tcgacgaagc tgtcgatcac cagcggatgg
     2161 tcgttgagat agggcgcctt gaggaactcg attccggggt tggcggcggc ggcttcgtcg
     2221 gtccaggtgt agatgcgctt gaccaggatg cc
//
LOCUS       DATIKR010000752         1511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_240984, whole genome shotgun sequence.
ACCESSION   DATIKR010000752 DATIKR010000000
VERSION     DATIKR010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240984"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1042)
                     /locus_tag="VLL76_11865"
     CDS             complement(65..1042)
                     /locus_tag="VLL76_11865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HSV30250.1"
                     /translation="MTIDIRDGLPADIVSARRVLGNEAQALEALAASLGDAFVAAVEL
                     LSKASGRVIVTGMGKSGHVARKIAATMASTGTPAFFVHPAEASHGDLGMVTPADAVIA
                     LSNSGETSELGDIVAYTRRFAIPMVSITSREKSTLATSADVSLVLPPIPEACPMGLAP
                     TTSTTMMLALGDALAVALLERKNFSAADFKVFHPGGNLGQRLLKVADLMHGGESLPAV
                     GLDTRMDDVLLVMTSKSLGCAGVVSADGHLEGIITDGDLRRHMRSDLLGLAARDVMTV
                     NPKTVPPNLLAAEALRQMNARGITSLFVVDDGKLVGVLHVHDCLRAGVA"
     gene            complement(1149..1418)
                     /locus_tag="VLL76_11870"
     CDS             complement(1149..1418)
                     /locus_tag="VLL76_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30251.1"
                     /translation="MLTEALLVLAVSASAPCRLDALDLRHGFVERDQAQEYRLSRAED
                     QCWTEPERGRQELDSLRGEWTLHQATPRPPPVWRGERPSAWDLSR"
BASE COUNT          231 a          508 c          535 g          237 t
ORIGIN      
        1 cgccgttccc ggcggcggat gggatgtcgc ggcatcgcgt agaaagccat cccttatcct
       61 tcgatcaggc cacgccggcg cgcaggcagt cgtggacgtg cagcacgccg accagcttgc
      121 cgtcatcgac cacgaacagg ctggtgatgc cgcgggcgtt catctggcgc agcgcctcgg
      181 cggccagcag gttgggcggc accgtcttgg ggttcacggt catgacgtcg cgggccgcaa
      241 gcccgagtag atcggaacgc atgtggcggc gcaagtcgcc gtcggtgatg attccttcga
      301 ggtggccgtc ggccgacacc acgccggcgc agcccaggct tttcgaggtc atcaccagca
      361 gcacgtcgtc catgcgggtg tcgaggccga ccgccggcag cgattcgccg ccatgcatca
      421 ggtcggcgac cttgagcagg cgctggccca aattgccgcc ggggtggaac accttgaagt
      481 cggcggccga gaagttcttg cgttccagca gcgccaccgc cagtgcgtcg cccagcgcca
      541 gcatcatggt ggtcgaggtg gtgggcgcca ggcccatggg gcaggcctcg gggatcggcg
      601 gcagcaccag cgacacgtcg gccgaagtgg ccagcgtgct tttctcgcgc gaggtgatgg
      661 acaccatggg aatggcgaag cggcgggtat aggcgacgat gtcgcccagt tccgacgtct
      721 cgcccgaatt ggacagcgcg atcacggcgt cggcgggcgt caccatgccc agatcgccgt
      781 ggctggcctc ggcggggtgg acgaagaagg cgggggtgcc ggtcgaggcc atggtcgccg
      841 cgatcttgcg cgccacgtgg ccgcttttgc ccatgccggt gacgatgacg cggcccgacg
      901 ccttggacag cagctcgacg gcggcgacga aggcgtcgcc cagcgaggcg gccagggctt
      961 ccagcgcctg cgcctcgttg cccaggaccc gccgggcgga cacgatgtcg gccggcaagc
     1021 cgtcgcggat gtcgatggtc atttggtcag cggtcccgtc ggtacgtgca aacgccgcgc
     1081 cacatcgggc gcggtcccta ctatacgaat cggcccggca ataggaaggc gaaaaggccg
     1141 accaccggtc agcgcgacaa atcccacgcg cttggccgct cgccgcgcca caccggcggc
     1201 gggcgcggcg tcgcctggtg caaggtccat tcgccgcgca ggctgtccaa ttcctgccgg
     1261 ccgcgctcgg gctcggtcca gcattggtcc tcggcccgcg acagccggta ttcctgggcc
     1321 tggtcgcgct cgacgaagcc gtggcgcaga tcgagcgcat ccaggcggca cggggcgctg
     1381 gccgacaccg ccagcaccaa caacgcttcc gtcagcatga tgtcaccgtc tttctcccgg
     1441 ccccaccagg cgttgattgc gggggccgtg actggatgtg gcgcggcttt cgtcggcctg
     1501 ccagattttt t
//
LOCUS       DATIKR010000753         3315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59071, whole genome shotgun sequence.
ACCESSION   DATIKR010000753 DATIKR010000000
VERSION     DATIKR010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59071"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VLL76_11875"
     CDS             complement(<1..432)
                     /locus_tag="VLL76_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30252.1"
                     /translation="MSEFQHMATAVLKHWARTDGANVAADRRTKFVGWRALASVRPMD
                     ASFLNPVNFRDKLWDRQPVNDVARAMQLFAPDGRHDFKPELGAGLGAVLRPMAPLSWF
                     SGDMSALVDREGNPAVLIACAGSIPLSDRKTVLVACGWYGGS"
     gene            complement(515..2197)
                     /locus_tag="VLL76_11880"
     CDS             complement(515..2197)
                     /locus_tag="VLL76_11880"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30253.1"
                     /translation="MFRSISARQAILWVIAVAMLSVMGANSLYTNGVITQSTDYTRKR
                     FEDSDRLAAFKLDQVSLVLAAMDSVIDRDEGRISPERQTEIDTLAERMTAQAKSMADL
                     ADTPEEKAIAARIAGEVATLVTLVRVDLKRAIESRAEEAEFDRLDDVIDTAGTKVGAS
                     VELMRKSLAEELDEAWSEQGSTMTSTLSFSVTTYGIAVLVLSALSWFVSRSMIKPLTL
                     LTGAMHTLAEGDTTTRVPTCKEIAEIDQMCGAVEVFKANKIEADRLEAEQAAAKARAE
                     AERRQAMLALAESFENSVKDVVNQVAAAAGQMKSTAEGLAGASDTSGQHATHLASAAE
                     QTAGNVSTVASAAEELAASIAEISRRVAQSSSISRSAVDEARKVDTIVRDLSEAVGRI
                     GAVVSMITDVASQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTTKATDEITA
                     QIGAVQQATQQAVAAIQGIVGVIDEMSEIAGTIAAAVEQQGAATAEIARNVQQAATGT
                     TEVSGSVAEMSGVVEQVRSSAGEVLAAANDMSGNAGRLSHQVDTFLATVRAA"
     gene            complement(2352..>3315)
                     /locus_tag="VLL76_11885"
     CDS             complement(2352..>3315)
                     /locus_tag="VLL76_11885"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30254.1"
                     /translation="ADDEVGEMARAMEVLKDGLARADRLQAEQDRLKAETEAERRAAL
                     TALAEGFEQGVQGVVGRVSGAALGMKATAEGLAGMAEESGDHAQALAHAADQTATSVQ
                     TVAAAAEELSSSIGEIARRVGHSSNIARSAVREAKKVSTMVEGLQTAAQKIGDVVQMI
                     SEIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKSLSNQTARATEEISQQIGAVQS
                     ATREVVAAITDIAKVIHDIDEIADSVAGAVSEQGAATDEIAESAQAAAAATSEVSGSV
                     AQMTQVVDMVRASAGEVLEAAQGLTDNAGALNAEVERFVASVRG"
BASE COUNT          446 a         1131 c         1175 g          563 t
ORIGIN      
        1 cgagccgccg taccagccgc aggccaccag cacggtcttg cggtcggaca gcgggatcga
       61 gccggcgcag gcgatcagca cggccgggtt gccctcgcgg tccaccagcg cgctcatgtc
      121 gccggaaaac cacgacagcg gcgccatcgg gcgcagcacg gcacccaggc cggcgcccaa
      181 ttccggcttg aagtcgtggc ggccgtcggg ggcgaaaagc tgcatggcgc gggccacgtc
      241 gttgaccggc tggcggtccc acagcttgtc gcggaaattg accgggttga ggaacgacgc
      301 gtccatcgga cggacggacg ccagtgcccg ccagccgacg aatttggtgc ggcggtcggc
      361 ggcgacattg gcgccgtcgg tacgggccca atgcttcagg acggcggtgg ccatgtgctg
      421 gaattcgctc atggccgcac aatgaacccc atcggttgaa aagaaaaccc ccggccgggt
      481 gggccggggg tcaggcacgc ggggtcaagg gaactcaggc ggcccgcacg gtcgccagga
      541 aggtatcgac ctgatggctc aacctgccgg cgttgcccga catgtcgttg gcggcggcca
      601 gcacctcgcc ggccgacgac cgcacctgct cgaccacccc cgacatctcg gcgacgctgc
      661 ccgagacctc ggtggtgccg gtggcggcct gctggacgtt gcgggcgatc tcggcggtgg
      721 cggcgccctg ctgctcgacg gcggcggcga tggtgccggc gatttcgctc atctcgtcga
      781 tgacgccgac gatgccctgg atggcggcga ccgcctgctg ggtggcctgc tgcaccgcgc
      841 cgatctgggc ggtgatctcg tcggtggcct tggtcgtctg gttggccagg ctcttgacct
      901 cgccggccac gaccgcgaag cccttgccgg cgtcgccggc gcgggcggcc tctatggtgg
      961 cgttcaaggc cagaagattg gtctggctgg cgacgtcggt gatcatggac accacggcgc
     1021 cgatgcggcc gaccgcctcg gacaggtcgc ggacgatggt atcgaccttg cgcgcctcgt
     1081 ccaccgccga gcgcgagatc gacgacgact gggcgacgcg gcggctgatc tcggcgatcg
     1141 aggcggccag ttcctcggcg gcggaggcca cggtgctgac gttgccggcg gtctgctcgg
     1201 cggccgaggc caaatgggtg gcgtgctggc ccgaggtgtc ggacgcgccg gccaggcctt
     1261 cggcggtgga cttcatctgg ccggcggcgg cggcgacctg attgacgacg tccttgacgc
     1321 tgttctcgaa gctctcggcc agggccagca tggcctggcg gcgttccgcc tcggcgcgcg
     1381 ccttggcggc cgcctgttcg gcctccagcc ggtcggcctc gatcttgttg gccttgaaca
     1441 cctcgacggc gccgcacatc tggtcgatct cggcgatttc cttgcaggtg ggcacccggg
     1501 tggtggtgtc cccctcggcc aacgtgtgca tggcgccggt cagcagggtc agcggcttga
     1561 tcatgctgcg gctgacgaac cacgacagcg cgctgagcac cagcacggcg attccatagg
     1621 tggtgaccga gaaggacagc gtgctggtca tggtcgaccc ttgctcggac cacgcctcgt
     1681 ccagttcctc ggccaggctc ttgcgcatga gttcgacgct ggcgcccacc ttggttccgg
     1741 cagtgtcgat gacgtcgtcc aggcgatcga actcggcctc ctcggcgcgg ctctcgatgg
     1801 cgcgcttgag gtcgacccgg accagcgtga ccagggtggc gacctcgccc gcgatgcgcg
     1861 cggcgatggc cttttcctcg ggggtgtcgg ccaggtcggc catggacttg gcctgggcgg
     1921 tcatgcgttc ggccagagtg tcgatctcgg tctggcgctc gggggaaatc cggccctcgt
     1981 cgcggtcgat gacgctgtcc atggcggcca gcaccaggct cacctgatcc agtttgaacg
     2041 cggccagccg gtcggaatcc tcgaaccgct tgcgcgtgta gtcggtggac tgggtgatga
     2101 cgccgttggt gtacaggctg ttggcgccca tcaccgacag catggcgacg gcgatgaccc
     2161 acaagatcgc ctggcgcgca ctgatgctgc ggaacatgac catatcctcc cctgaacgca
     2221 gtcatcggcg actctaggga ggcggcgtta acgagtcatc tgaccggagg aaccagaaac
     2281 ggccttggga gcgcgcccat gcggacgaca ccccataacc gatggtttaa tcgctatgac
     2341 ctacgtattc gtcacccgcg cacggaggcg acgaagcgtt cgacctcggc attcaaggcg
     2401 ccggcgttgt cggtcagccc ctgggccgcc tccagcactt cgccggccga cgcccgcacc
     2461 atgtccacca cctgggtcat ctgggcgacg ctgcccgaca cctccgaggt ggcggcggcg
     2521 gcggcctggg cgctttcggc gatctcgtcg gtggcggcgc cctgttccga cacggcgccg
     2581 gccacgctgt cggcgatctc gtcgatgtcg tggatgacct tggcgatgtc ggtgatggcc
     2641 gcgaccactt cccgggtggc ggattggacg gcgccgatct gctggctgat ctcctcggtg
     2701 gcgcgggcgg tctggttgga caggctcttg acctccgatg ccacgacggc gaagcccttg
     2761 cccgcctcgc cggcgcgggc cgcctcgatg gtggcgttga gcgccagcag gttggtctgg
     2821 ccggcgattt cgctgatcat ctgcaccacg tcgccgatct tctgggcggc ggtctgcagg
     2881 ccctcgacca tggtgctgac cttcttggcc tcgcgcaccg ccgagcgggc gatgttcgaa
     2941 ctgtgcccga cgcgccgcgc gatctcgccg atcgaggacg acagctcctc ggcggcggcg
     3001 gccaccgtct gcacgctggt ggcggtctgg tcggcggcgt gggccagggc ctgggcgtgg
     3061 tcgcccgatt cctcggccat gcccgccagc ccttcggcgg tggccttcat gcccagggcg
     3121 gcgccggaca ctcgaccgac gacaccctgg acgccctgct cgaagccctc ggccagggcg
     3181 gtcagggcgg cacggcgctc ggcctcggtt tccgccttca gccggtcctg ttcggcctgc
     3241 agccggtcgg cgcgggccaa tccgtccttc agaacctcca tggcgcgggc catctcgccg
     3301 acctcgtcgt cggcc
//
LOCUS       DATIKR010000754         2155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_156696, whole genome shotgun sequence.
ACCESSION   DATIKR010000754 DATIKR010000000
VERSION     DATIKR010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156696"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VLL76_11890"
     CDS             complement(<1..650)
                     /locus_tag="VLL76_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014776668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit C"
                     /protein_id="HSV30255.1"
                     /translation="MKLFPVRGGVHPDYRKELSSEQAIEPFPMPARLFIPLQQHIGAP
                     AEPVVKIGDHVLKGQMIARAQGPVSAPVHAPTSGTIADIGNHTAPHPSGLPQRTIVIE
                     ADGKDEWAPLPEPVADPLSLTPQAIAERVAAAGIVGLGGATFPSAIKLDLKARYKLDT
                     LVMNGAECEPYLTCDDRLMRECADEVMDGVRIMAYALEVQQVIIAIEDNKPEALAA"
     gene            complement(653..1189)
                     /locus_tag="VLL76_11895"
     CDS             complement(653..1189)
                     /locus_tag="VLL76_11895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014776669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HSV30256.1"
                     /translation="MLEAVGSLAVLGATLGTILGIASRYLKVEENPLEAELEGMLPGS
                     QCGQCGYAGCRQAAAALASGEAPVTLCPPGGRALAAAVAEKLGVTVDLSGAEEAEPEI
                     AFINEDVCIGCMRCIQECSTDAIVGAAKMMHTVIQEVCHGCGKCGKICPTEAIEMQAV
                     PVTLASWHWHKPVSRMVH"
     gene            complement(1201..1782)
                     /gene="rsxA"
                     /locus_tag="VLL76_11900"
     CDS             complement(1201..1782)
                     /gene="rsxA"
                     /locus_tag="VLL76_11900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013818131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HSV30257.1"
                     /translation="MQELALLLVGAVLVNNVVLVKFLGLCPFMGTSNKVDTAMGMGMA
                     TTFVMTLSSVLAWAIETLLLAPFGLAFLRTITFILVIAAVVQFTEMVVRKISPALYQA
                     LGIYLPLITTNCAVLGVALLNVQEGHSFIQSLLYGFGLAAGFSLILVIFAGLRERIAL
                     AEVPTVFEGAPIAFVTAGLLSLAFMGFAGISTK"
BASE COUNT          394 a          688 c          728 g          345 t
ORIGIN      
        1 atggcggcca gggcttcggg cttgttgtcc tcgatggcga tgatgacctg ctgcacttcc
       61 agggcgtagg ccatgatgcg cacgccgtcc atcacctcgt cggcgcattc gcgcatcagg
      121 cggtcgtcgc aggtcaggta cggctcgcat tcggcgccgt tcatcaccag ggtgtcgagc
      181 ttgtagcggg ccttgaggtc cagcttgatg gccgacggga aggtggcacc gcccaggccg
      241 acgatgccgg cggcggcgac gcgctcggcg atggcctggg gggtcagcga cagcgggtcg
      301 gccaccggct cgggcaacgg cgcccattcg tccttgccgt ccgcctcgat gacgatggtg
      361 cgctggggca ggcccgacgg atgcggcgcg gtgtggttgc cgatgtcggc gatggtgccc
      421 gaggtcgggg cgtgcacggg ggccgacacc gggccctggg cgcgggcgat catctggccc
      481 ttgagcacgt ggtcaccgat cttgaccacc ggttcggcgg gggcgccgat atgctgctgc
      541 agcgggatga acaggcgggc cggcatcggg aatggctcga tggcctgttc cgaggacagc
      601 tccttgcggt agtcggggtg gacgccgccg cggacgggga acagcttcat gatcagtgca
      661 ccatgcgcga caccggcttg tgccagtgcc agcttgccag ggtgacggga accgcctgca
      721 tctcgatggc ctcggtcggg cagatcttgc cgcacttgcc gcagccgtgg cagacctcct
      781 ggatcaccgt gtgcatcatc ttggcggcgc cgacgatggc gtcggtcgaa cattcctgga
      841 tgcagcgcat gcagccgatg cagacgtcct cgttgatgaa ggcgatctcg ggttcggctt
      901 cctcggcgcc cgacaggtcg acggtgacgc ccaatttctc ggcgacggcg gcggccaggg
      961 cgcgtccacc cggcgggcac agcgtcaccg gcgcctcgcc gctggccagg gcggcggccg
     1021 cctggcggca gccggcataa ccgcactggc cgcattgcga gccgggcagc atgccctcga
     1081 gctcggcctc cagcgggttc tcctcgacct tgaggtagcg cgacgcgatg cccaggatgg
     1141 tgcccagcgt ggcaccaagg acggcgagac ttccgacagc ttccagcatg ttcccgatcc
     1201 ctacttggtg ctgatgccag cgaaacccat gaaagccagc gacaacaggc cggcggtgac
     1261 gaatgcgatg ggggcgccct cgaacacggt gggcacctcg gccagcgcga tgcgttcgcg
     1321 caggccggcg aagatgacga ggatgagcga gaagcccgcc gccaggccga agccgtagag
     1381 caggctttgg atgaagctgt ggccctcctg cacgttcagc agggcgacgc ccaggacggc
     1441 gcagttggtg gtgatcagcg gcaggtagat gcccaacgcc tggtacagcg ccggcgagat
     1501 cttgcgcacc accatctcgg tgaactgcac cacggcggcg atcaccagga tgaaggtgat
     1561 ggtgcgcagg aaggcaaggc cgaacggcgc cagcagcagg gtctcgatgg cccaggccag
     1621 caccgaggac agcgtcatca cgaaggtggt ggccatgccc atgcccatgg cggtgtcgac
     1681 cttgttcgac gtgcccatga aggggcacag gccaaggaac ttgaccagca ccacgttgtt
     1741 gaccagcacc gcgccgacca gcagaagagc gagttcctgc ataattttta ctcaccgatc
     1801 ccggactgca ccataattga gcatatccta ccgcaaccgt caccgggccg ccatgaaaat
     1861 cccgcaatgc acaagcgcaa aggcgcggga tctttgttgc ggcgcgaacg gacgcgttgt
     1921 tacctcaaac agaggaaaaa caaaattaaa ttgcgcttac tcacaccata ggcgcaagaa
     1981 aaccactcca caacgctcga acgggtagtc cgcaccagcc ccgacgggca gtcggcgggg
     2041 cgaaaaaatt ggtgcgccgc acaacgccaa tcccaggcag gctgcggctt ctacctatca
     2101 caccgggcgt ttccgcacac ctgcccgata tccccatctt ttctgcggga ttcag
//
LOCUS       DATIKR010000755         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_241003, whole genome shotgun sequence.
ACCESSION   DATIKR010000755 DATIKR010000000
VERSION     DATIKR010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241003"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1133
                     /locus_tag="VLL76_11905"
     CDS             <1..1133
                     /locus_tag="VLL76_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004393366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV30258.1"
                     /translation="DEIDEVVACLRSGWITTGPRALRFEEMFRDRLGVPHAVAVNSAT
                     AGLHLVLAALGIGAGDEVIVPSLTWASTANVVELLGARAVLADVDGDTLQIDPAEVAR
                     LAGPRTRAVVAVHYAGAPADLDALRAIARDRGIPLIEDAAHAVGTFHRGVEVGSDSFA
                     AVFSFHPIKNITTGEGGMIVCRDDELARRLRLLRNHGVSRDAWKRYGQGGSPQYEVLE
                     PGFKYNMMDIQAALGLCQLPKLDRFNAERARLAERYDRLLAEVAGIRPIGRVPYPHTH
                     AWHLYIVRVDADGDLSGARRDEVIAALAEEGVSVGLHFPALHVQSYYRDRYGLKPGDL
                     PRAAAAGAEIMSLPLYPGLGDDEQERVVAALARAVGKRRQAA"
     gene            1130..1945
                     /locus_tag="VLL76_11910"
     CDS             1130..1945
                     /locus_tag="VLL76_11910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30259.1"
                     /translation="MTQDFTVIGWCTQSYKHLAEGVREDCRRLGYRYHLYEIDDEYNS
                     LMAAWCNHPRIIRRGVEDFGTVLFLDIECRILRPLPPHWRAPLVSVRLPEQKFWIRYN
                     SGTVMADRDSLPWLDTWIAILEDWRMGELEPADFVHWPGDLCDELALAAALAAHRVKV
                     ATPGLEYVDRGNLAAELARGLWRNEATVIQHPTIHHWPKEHDPVECKKLFWQNTPGTP
                     EAAAALFATDEGEVRRDGWVFDPATRRYAPQEFWPDHARPWIDDPVTLTSAQR"
     gene            complement(2273..>2521)
                     /locus_tag="VLL76_11915"
     CDS             complement(2273..>2521)
                     /locus_tag="VLL76_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclease"
                     /protein_id="HSV30260.1"
                     /translation="GVDVTTRVRLRGIDTPELRGPCPQAALDAKDALARLIGTGPVTL
                     IHVAPDKYGSRVDATLLLPSGMDASAALRAGGHAAGCR"
BASE COUNT          376 a          867 c          868 g          410 t
ORIGIN      
        1 aggacgagat cgacgaggtc gtcgcctgcc tgcggtcggg gtggatcacc accgggccgc
       61 gcgcgttgcg gttcgaggaa atgttccgcg accggctggg cgtgccccat gccgtcgccg
      121 tcaactcggc caccgccggg ctgcacctgg tcctggcggc gctgggcatc ggcgccggcg
      181 acgaggtcat cgtgccgtcg ctgacctggg cgtcgaccgc caacgtggtg gaattgctgg
      241 gggcgcgggc ggtcctggcc gacgtcgatg gcgacaccct gcagatcgac ccggccgagg
      301 tggcccgcct ggcggggccg cgcacgcggg cggtggtggc ggtgcattat gccggcgccc
      361 cggccgatct cgacgcgctg cgggccatcg cccgggatcg cggcatcccg ttgatcgagg
      421 atgccgccca cgccgtcggc acctttcatc gcggcgtcga ggtgggcagc gattccttcg
      481 cggcggtgtt cagcttccac cccatcaaga acatcaccac cggcgagggc ggcatgatcg
      541 tctgccgcga cgacgagctg gcgcggcggc tgcgcctgct gcgcaaccac ggggtctcgc
      601 gcgatgcctg gaagcgctat ggccagggcg gctcgccgca atacgaggtg ctggagcctg
      661 gcttcaaata caacatgatg gacatccagg cggcgctggg gctgtgccaa ctgcccaagc
      721 tggaccgctt caacgccgag cgtgcgcggc tggccgagcg ctatgaccgc ctgttggccg
      781 aggtggccgg catccgcccc atcggccgcg tgccctatcc ccacacccac gcctggcacc
      841 tttacatcgt gcgggtggac gccgacggcg acctttcggg ggcgcggcgc gacgaggtca
      901 tcgccgcctt ggccgaagag ggcgtgtcgg tcgggctgca tttcccggcg ctgcacgtgc
      961 aatcctatta ccgcgaccgc tatggcctga agccgggcga tctgccgcgt gcggcggcgg
     1021 ccggggccga gatcatgtcg ctgccgcttt atcccgggct gggcgacgac gagcaggagc
     1081 gggtggtggc cgccctggcc cgcgccgtcg gcaagcggag gcaggcggcg tgacgcagga
     1141 tttcaccgtc atcggctggt gcacccagtc ctacaagcat ctggccgagg gcgtgcgcga
     1201 ggattgccgc cggctgggct atcgctatca cctgtacgag atcgacgacg aatacaattc
     1261 gctgatggcg gcgtggtgca accatccgcg catcatccgc cggggcgtcg aggatttcgg
     1321 caccgtgctg ttcctggaca tcgaatgccg catcctgcgc ccgctgccgc cccattggcg
     1381 ggcgccgctg gtgtcggtgc ggctgcccga gcagaagttc tggatccgct acaattccgg
     1441 cacggtgatg gccgaccgcg acagcctgcc gtggctcgac acctggatcg ccatcctgga
     1501 ggattggcgc atgggcgagc tggagccggc cgacttcgtc cattggcccg gcgacctgtg
     1561 cgacgagctg gctttggcgg cagccctggc cgcccaccgg gtcaaggtgg ccacgccggg
     1621 cctggaatac gtggatcgcg gcaatctggc ggccgaactg gcgcgcggcc tgtggcgcaa
     1681 cgaggcgacg gtgatccagc accccacgat ccaccactgg cccaaggaac acgatcccgt
     1741 cgagtgcaag aagctgttct ggcagaacac ccccggcacc cccgaggccg ccgccgccct
     1801 gttcgccacc gacgagggcg aggtccgccg cgacggctgg gtgttcgacc ccgcgacgcg
     1861 ccgctatgcc ccccaggaat tctggcccga ccacgcccgc ccatggatcg acgacccggt
     1921 cacgctgacc tcggcgcagc ggtaacgcca ggagggcgaa cctgcatctt catcccttgc
     1981 aggttcagcg ccggcccttc gcccccagac ccgtcacccc cgcgaaagcg ggggtccatg
     2041 ggtccacccg ctcaacccat tgttccgccg acattttttg cggctttcat ggatccccgc
     2101 ctgcgcgggg atgacggtga gggtgcgccg cttggttttc aggacacaga tgaacacaga
     2161 taaacacaga tgaattcgga tgggttggat gcgccgtcat gtgccacggc aataatatta
     2221 tctattttta tctgtgttca tctgtgttca tctgtgtctg aagaatcgtc tttcatcgac
     2281 accccgcagc atgcccgccc gcccgcaggg cggccgacgc atccatgccc gacggcagca
     2341 gcagcgtcgc gtcgacgcgg gagccgtact tgtcgggggc gacgtggatc agcgtcaccg
     2401 gcccggtgcc gatcagccgc gccaaagcgt ccttggcgtc cagcgccgcc tgggggcagg
     2461 ggccgcgcag ctcgggggtg tcgatgccgc gcagacggac ccgggtggtg acgtccaccc
     2521 c
//
LOCUS       DATIKR010000756         1738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_229614, whole genome shotgun sequence.
ACCESSION   DATIKR010000756 DATIKR010000000
VERSION     DATIKR010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229614"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1211
                     /locus_tag="VLL76_11920"
     CDS             <1..1211
                     /locus_tag="VLL76_11920"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSV30261.1"
                     /translation="HWGMMTLQALTRHDDVRAVCIEASPVNAAQLRRWLAINGVADRA
                     HVIHAGAWNKAEGEASLSQQSTMGHSVKPGAVAGSGPTISLVTIDGCLDRVPDLAGRR
                     VIIKIDVEGSEPEVIEGARQAIESGRVAAIIWERGTQYDEGERRQAVLDMVRDLEAKG
                     FTHWHFPHEDAAGAMVPWVLGEEYGNVFALAPGLLPQPCYHPPVRRPPPARPLRSLAM
                     REDRRLEHMDRMLAAKAPDAARWAWIKQLEPGADARATAAARHLDGAASVLDLGAGLG
                     RLKVALPKTTTVTAIDMVLWPWVDDAMDLDGGSFPHGQWEATALLAVLGHLHRPEQVL
                     ARARDVAGRLVLTYPLTEDVADAKQRRIGGLFNDLDRDGLAAMLSRAGWAIEAEEKIG
                     LETLFACRRL"
     gene            1196..>1738
                     /locus_tag="VLL76_11925"
     CDS             1196..>1738
                     /locus_tag="VLL76_11925"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV30262.1"
                     /translation="MSTTLNKKARAEAKKQPAAQPPRDEAGAAYAAGLGLTEQNRLPE
                     AMAAFARAAELSPDSVDARIGLGVTLRKMNRFKEAVAAYESALAISPRVPAVWSNLGN
                     ALKDMEEIGQAIAAHQRAVSMDPGNGRFRHNYGIALAHAGKHAEAVAQFDEALKTLPG
                     DTEVLWDRARSILAQGDYRNG"
BASE COUNT          268 a          632 c          608 g          230 t
ORIGIN      
        1 cccattgggg catgatgacg ctgcaggcgc tgacccggca tgacgacgtg cgcgccgtgt
       61 gcatcgaggc gtcgcccgtc aacgccgccc agttgcggcg ctggctggcc atcaacggtg
      121 tcgccgaccg cgcccatgtc attcatgccg gcgcctggaa caaggccgag ggcgaggcgt
      181 cgctgagcca gcagagcacc atgggccact cggtcaagcc gggggcggtg gcgggcagcg
      241 gcccgaccat ctcgctggtc accatcgacg gctgcctcga ccgcgtcccc gacctcgccg
      301 gccgccgcgt catcatcaag atcgacgtgg aaggcagcga gcccgaggtg atcgagggtg
      361 cccgccaggc catcgaatcc ggccgcgtcg ccgccatcat ctgggagcgc ggcacccagt
      421 acgacgaggg cgagcgccgc caggccgtgc tggacatggt gcgcgacctg gaggccaagg
      481 gcttcaccca ctggcacttc ccgcacgagg acgccgccgg cgccatggtg ccgtgggtgc
      541 tgggcgagga atacggcaac gtcttcgccc tggcccccgg cctgctgcca caaccctgct
      601 accacccgcc ggtgcgccgt ccgccgccgg cacggccgtt gcgctcgctg gccatgcgcg
      661 aggatcgccg gctcgagcac atggaccgca tgctggccgc caaggcgccc gacgccgccc
      721 gctgggcctg gatcaagcaa ctggagccgg gcgccgatgc ccgcgccacc gccgccgccc
      781 gccatctcga cggcgccgcc tcggtgctcg atctcggcgc cggcctcggc cggctgaagg
      841 tggcgctgcc caagaccacc accgtcaccg ccatcgacat ggtgctgtgg ccgtgggtgg
      901 acgatgccat ggacctggac ggcgggtcgt ttccccacgg ccaatgggaa gcaaccgcgc
      961 tgctggcggt gctgggccac ctgcatcgcc ccgagcaggt gctggcgcgg gcccgtgacg
     1021 tcgccgggcg gctggtgctg acctatccgc tgaccgaaga cgtggcggat gccaagcagc
     1081 gccggatcgg cggtctgttc aacgacttgg atcgcgacgg cttggccgcc atgctgtcgc
     1141 gcgccggctg ggccatcgag gccgaggaaa aaatcggatt ggagactttg ttcgcatgtc
     1201 gacgactctg aacaagaagg cccgcgccga ggccaagaaa cagccggccg cgcagccgcc
     1261 ccgcgacgag gccggcgccg cctatgccgc cggcctgggc ctgaccgaac aaaaccgcct
     1321 gcccgaggcg atggccgcct tcgcccgcgc cgccgaattg tcgcccgaca gcgtcgacgc
     1381 ccgcatcggc ctgggcgtca ccttgcgcaa gatgaaccgc ttcaaggagg cggtggcggc
     1441 ctatgagtcg gcgctggcga tctcgccgcg cgtgccggcg gtgtggagca atctgggcaa
     1501 cgcgctgaag gacatggagg agatcggcca ggccatcgcc gcccaccagc gcgcggtgtc
     1561 catggacccc ggcaacggcc gcttccgcca caattacggc atcgccttgg cccatgccgg
     1621 caagcacgcc gaggccgtgg cgcagttcga cgaggcgctg aagacgctgc ccggggatac
     1681 cgaggtgctg tgggaccgcg cccgttcgat cctggcccag ggcgactacc gcaacggc
//
LOCUS       DATIKR010000757         2383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_34619, whole genome shotgun sequence.
ACCESSION   DATIKR010000757 DATIKR010000000
VERSION     DATIKR010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34619"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..972
                     /locus_tag="VLL76_11930"
     CDS             187..972
                     /locus_tag="VLL76_11930"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSV30263.1"
                     /translation="MAADHTRTGRRWLGLVGVGVAMMVGAATARAEAPSCTGLKSEVG
                     QLKSELAAKDRAIRMLTQRLRAAAQSNIKAVEDAFVGTGIKVDRLIKRGSADGNQGGP
                     FIPADAAAARDIQRWDALNRVIQVLPLAAPLARYETASGFGKRRDPINKRRAIHEGID
                     LVAPLRTPVAATGPGKVVFAGLRGRYGKLIEIDHGMGVRTRYAHLGAIKVSVGQSVRP
                     GQVIGLVGSTGRSTGPHLHYEILVDGKPNNPARFLRAGARLGK"
     gene            1218..2081
                     /locus_tag="VLL76_11935"
     CDS             1218..2081
                     /locus_tag="VLL76_11935"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV30264.1"
                     /translation="MPPEWVARPIKRPPGADLALAIDQQLYPALLPLVQRFARDNGIR
                     VALQEGTCGVAAGALADKSADITGMCCPPGPLDRMPGVRYHTIGIAAIALIVHPSNGV
                     ADVSLDQARRMFGGEVRSWSDLPVSGFKPAPAGEVRAVTRLHCKPRPGHWRLLLDNEN
                     LFAADALDVPAIRDMIAHVSASPAAIGYETLWHVADNAKVGQVKTLRLDGVLPGDGTA
                     LAQGRYPLYRVMNVTTWGGAGSAPMAGKLVAYLLEHAADIDPVYGIVPAVALRRNGWQ
                     FAGDELVGQPK"
     gene            2084..>2383
                     /locus_tag="VLL76_11940"
     CDS             2084..>2383
                     /locus_tag="VLL76_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30265.1"
                     /translation="MRRLAATAARWGLAPRLILGGTVVAMLVWGGLDLIHSRRIETVV
                     RAELTHQLQDDAHLDRLRFDASVRGHFAYVRMLASNQAVAAHAGLALARPAVTVSV"
BASE COUNT          360 a          832 c          827 g          364 t
ORIGIN      
        1 atgccgggtg gctgcgggtg atgccgtcgc gacggacgat gaccaaaggg gtgactccca
       61 ccggcgaaac tgcgtgcttc caacctacca aatgcgcgct ggcgcgcaac cgtcagagga
      121 catgtgccga caagtccagt ccccacatga ccttcgaggc atggcccggg caaggaggtt
      181 cccccgatgg cggcagacca tacccggaca gggcggcgtt ggctgggatt ggtgggcgtg
      241 ggggtggcga tgatggtggg cgcggcgacg gcgcgggccg aggcgccgtc ctgcaccggg
      301 ctgaaaagcg aagtggggca actgaagtcg gaactcgccg ccaaggaccg cgccatccgg
      361 atgctgaccc aacgcctgcg cgccgccgcc cagagcaaca tcaaggcggt cgaggacgcc
      421 ttcgtcggca ccggcatcaa ggtggaccgg ctgatcaagc gcggcagcgc ggacggcaac
      481 cagggcggcc cgttcatccc tgccgacgcc gctgccgccc gcgacatcca gcggtgggat
      541 gccctcaacc gcgtgatcca ggtgctgccg ctggcggcgc cgctggcgcg ctacgagacg
      601 gcttccggct tcggcaagcg gcgcgacccc atcaacaagc gccgcgccat ccacgaaggc
      661 atcgacctgg tcgcccccct gcgcacgccg gtggccgcca ccggccccgg caaggtggtg
      721 ttcgcgggtc tccgagggcg ttacggcaag ctgatcgaga tcgaccatgg gatgggcgtg
      781 cgcacccgct atgcccatct cggcgccatc aaggtctcgg tcggccaaag cgtgcggccg
      841 ggacaggtga tcgggctggt cggcagcacc ggccgcagca ccgggcctca cctgcattac
      901 gagatcctgg tcgacggcaa gccgaacaat ccggcccgct tcctgcgtgc cggcgcgcgc
      961 ctgggcaaat agcgccgaat tttatacttt tgcgcttccg gccctggccg aacgggtggt
     1021 ggccgattgg tcatacctgt gcccacaatc gagtgtaaag cgattgctcg cgctctgatt
     1081 ggggaggcgc cgagatgttt aacctgggga taatacccgc cgtttgcgcg gcactaacct
     1141 tggttgccgg ggttgcttgg gctgcagaac ctgacttggg cggccgcccg ttcagcccac
     1201 ccggcgacca tgtgccgatg ccgcccgaat gggtggcgcg gccaatcaag cgcccacccg
     1261 gcgccgacct tgccctcgcc atcgaccagc agctctatcc cgccctgctt ccgctggtgc
     1321 agcgattcgc tcgcgacaac ggcatcaggg tggcgctgca ggaagggacc tgcggcgtcg
     1381 ccgccggcgc gctggccgac aagagcgccg acatcaccgg catgtgctgc ccgccggggc
     1441 cgctcgaccg catgcccggg gtgcgctatc acaccatcgg catcgccgcc atcgcgctga
     1501 tcgtccatcc ctcgaacggc gtcgcagacg tcagcctgga ccaggcgcgc cgcatgttcg
     1561 gcggcgaggt gcggtcgtgg tcggacctgc cggtcagcgg cttcaagccg gccccggccg
     1621 gcgaggtgcg cgccgtcacc cgcctgcatt gcaagccgcg ccctggtcat tggcggctgc
     1681 tgctggacaa cgagaacctg ttcgccgccg acgcattgga cgtgccggcc atccgcgaca
     1741 tgatcgcgca tgtgtcggcg tcgcctgccg ccatcggcta cgagaccctg tggcacgtgg
     1801 cggacaacgc caaggtcggc caggtcaaga ccctgcggct cgacggcgtg ctgcccggtg
     1861 acggcaccgc gctggcgcag gggcgctatc cgctctaccg cgtgatgaac gtcaccacct
     1921 ggggcggagc aggctcggcg cccatggccg gcaagctggt cgcctatctg ctggagcatg
     1981 cggccgacat cgacccggtc tacggcatcg ttccggcggt ggcgctgcgg cgtaacggct
     2041 ggcaattcgc cggcgacgag ttggtcgggc agccgaaata gccatgcgcc gccttgccgc
     2101 caccgccgcc cgctggggcc ttgccccccg cctgatcctg ggcgggacgg tggtggcgat
     2161 gctggtgtgg ggcggactcg acctgatcca ttcccgccgc atcgaaaccg tggttcgggc
     2221 cgagctgacc caccagttgc aggacgacgc ccatctcgac cggttgcgct tcgacgcctc
     2281 ggtgcgcggc catttcgcct acgtccgcat gctggcctcg aaccaggcgg tggcggccca
     2341 tgccgggctg gccctggcgc ggccggccgt gacggtgtcg gtg
//
LOCUS       DATIKR010000758         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_119877, whole genome shotgun sequence.
ACCESSION   DATIKR010000758 DATIKR010000000
VERSION     DATIKR010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119877"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VLL76_11945"
     CDS             <1..651
                     /locus_tag="VLL76_11945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30266.1"
                     /translation="AVVPRGQPLPEVDFTVNLPDVPRIIGTTSRTTPPRDVPYLHLPD
                     GVSPHVFPVDGMLRVGIAWAGRERSRPVPLSAMLPLAAHPGVHLVSLQRGAAAEDLTT
                     TGAIAFIDDMGSQCEDLADTAAIIAGLDLVVATDCVEAHIAGALGKPVWVMLPLGNDW
                     RWVDSRDDSVWYPTMRVFRQGTDGSWTRAVARAAEAMSAMAAARPREVTPFRHAQA"
     gene            complement(642..767)
                     /locus_tag="VLL76_11950"
     CDS             complement(642..767)
                     /locus_tag="VLL76_11950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30267.1"
                     /translation="MTITAHRSYQVLLKPCASMAHCEGATHPIKPGHDGKGLGHA"
     gene            complement(931..1353)
                     /locus_tag="VLL76_11955"
     CDS             complement(931..1353)
                     /locus_tag="VLL76_11955"
                     /inference="COORDINATES: protein motif:HMM:NF014813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HSV30268.1"
                     /translation="MARKGPGFGEVLGDICWLMAQSAHHKHIFLADLEWLVIPALTAR
                     QFRVLKAGTKPMAYVSWAHLSEDAEARLLSGQPRLRPADWKSGDRLWVIDVVAPFGGN
                     DEILRTLKKQHFADVSIRSLRPRADGKGFEAWEIPSGD"
BASE COUNT          263 a          558 c          531 g          265 t
ORIGIN      
        1 gcggtggtgc cgcgcggcca gccgctgccc gaggtggact tcaccgtcaa cctgcccgac
       61 gtgccgcgca tcatcggcac cacctcgcgc accacgccgc cgcgcgacgt gccctatctg
      121 cacttgcccg acggcgtcag cccgcacgtc ttcccggtcg atggcatgct gcgcgtcggc
      181 atcgcctggg cgggacgcga gcgctcgcgc ccggtgccgc tgtcggccat gctgccgctg
      241 gcggcacatc ccggcgtgca cctggtcagc ctgcaacgcg gcgccgccgc cgaggacctg
      301 accacgaccg gcgccatcgc cttcatcgac gacatgggct cgcaatgcga ggacctggcc
      361 gacaccgccg ccatcatcgc cggcctcgac ctcgtcgtcg ccaccgactg cgtcgaggcc
      421 cacatcgccg gtgccctggg caaaccggtg tgggtgatgc tgcccctggg caacgactgg
      481 cgctgggtcg attcccgcga cgattccgtg tggtacccga ccatgcgtgt gttccgccag
      541 ggcacggacg gctcgtggac ccgcgcggtc gcccgtgccg ccgaagcgat gagcgcaatg
      601 gcggcggcgc ggcctcgaga ggttacccct tttcgtcatg ctcaggcatg acccaaccct
      661 ttgccgtcat ggccgggctt gatggggtgg gtggcccctt cgcaatgcgc catcgaggcg
      721 caaggtttca gcaggacctg gtacgagcgg tgggcggtga tcgtcaccgg ttggctgacc
      781 tggccgccgg ccgccgacac gtcgatggga aattagacat agggctcgtt gtgctctcgc
      841 gcgcatgcgg gaaatgcgaa cgacgcgagc ggcgagcatg gcgaacaccg gatgcagcat
      901 cgtcctactc cacgagcgcg acgcccgacg tcagtcgccc gaagggatct cccacgcctc
      961 gaaccccttg ccgtcggctc gtggccgaag ggacctgatg gacacgtcgg cgaagtgctg
     1021 cttcttgagg gtacgcagga tttcatcatt gccgccgaat ggcgctacca cgtcgatcac
     1081 ccacaaccgg tcccccgact tccaatccgc cgggcgcagc ctgggctggc cggacagcag
     1141 gcgcgcctcg gcgtcctccg acagatgggc ccaggataca taggccatgg gtttcgtccc
     1201 ggccttgagg acgcggaatt gcctggcggt cagggctggg atgacgagcc attccaggtc
     1261 ggccaggaag atgtgcttat ggtgcgccga ttgcgccatc agccagcaga tgtcgcccaa
     1321 cacctcgccg aaacccggcc ctttgcgcgc cacagattgc gccccgttgg cgcggcggcg
     1381 gcgcgagccg acaggcgccg ctggtgtctg gccctccgca gtccgatcac cgtttgccat
     1441 tttcgatcct tccgtcaaag aaacgcacaa ccatacattg ggcaggacgc gctgtcaaaa
     1501 cggcgcctcg atggccggcg cacatcggat gattaaattg gggggggatt tctgggggca
     1561 ggtgaccggc gaagcgccgt gaggaatcaa aaaagcccgc aagtcattgg acttacg
//
LOCUS       DATIKR010000759         3040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_229660, whole genome shotgun sequence.
ACCESSION   DATIKR010000759 DATIKR010000000
VERSION     DATIKR010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229660"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1288)
                     /gene="treS"
                     /locus_tag="VLL76_11960"
     CDS             complement(<1..1288)
                     /gene="treS"
                     /locus_tag="VLL76_11960"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008141018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HSV30269.1"
                     /translation="MDPLWFKDAILYQLHIKAFFDSDNDGKGDFRGLTEKLDYVQQLG
                     VDTLWLLPFYPSPLKDDGYDIADYRNINPAYGNLKDFRLFVREAHARGLKVVTELVIN
                     HTSDQHPWFQRARRARAGSAARDYYVWSDSDQKYLGTRIIFTDTEKSNWAWDDEAKAF
                     YWHRFFSHQPDLNFDNPRVVREVIAVMRHWLDMGIDGLRLDAVPYLCEREGTNNENLP
                     ETHAILKQLRRALDESHPGRIFVAEANQWPEDVLPYFGNADECHMAFHFPLMPRMYMA
                     IAREDRHPITDILRQTPDIPSRCQWAIFLRNHDELTLEMVTDKERDYLWETYAADRRA
                     RVNVGIRRRLAPLMENDRRKIELLNSLLFSMPGTPIIYYGDEIGMGDNIFLGDRDGVR
                     TPMQWNEDRNGGFSRADPARLYLPPIMDPVYGYEAVN"
     gene            complement(1401..>3040)
                     /locus_tag="VLL76_11965"
     CDS             complement(1401..>3040)
                     /locus_tag="VLL76_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSV30270.1"
                     /translation="PVELVEGRRLLNNALPRVQGADRERLERVLADLDRTDDEGDRAD
                     LMGSTLVRAIMARWPDLSKAVRHPGLFEVVVDRVAARFAAWYEIMVRSQGSDPKKSAT
                     FKDAEKRLPEIARMGFDVVYLLPIHPIGRVHRKGPDNTLVAGPGDPGSPYAIGSVEGG
                     HTAIHPDLGTLDDFRHFVAEVKRHGMEVALDFAIQCAPDHPWIKAHPEWFNWRPDGTI
                     KYAENPPKKYQDIVNVEFHGQGAQALWQELLGVVMFWAGEGVRIFRVDNPHTKPIPFW
                     EWLIATVQEQYPDVIFLSEAFTRPKLMRALAKAGFTQSYTYFTWRNFKHELADYMAEL
                     AQGEAHDYMRPNFWPTTPDILPPFLQTGGRAAFRIRLVLAATLASVYGIYNGYELCEA
                     AAVPGKEEYLHSEKYQFKVWDWNRAGNIKDDITRINRIRRDNPALHEFENVRFHQSSD
                     DSVLFYGKSTLDRSNMIFVAVTLDPFDARDTVLTFPLDAMGVPAGETFEVEELLTGER
                     HLWRGAAHKLRLDPKLNPAAIFRVTVWNSVDYRTPCF"
BASE COUNT          498 a          925 c         1061 g          556 t
ORIGIN      
        1 cgttgaccgc ctcgtagccg tagaccgggt ccatgatggg gggcaggtac agccgggccg
       61 ggtcggcgcg cgagaagccg ccgttgcggt cctcgttcca ctgcatgggc gtgcgcacgc
      121 cgtcgcggtc gcccaggaag atgttgtcgc ccatgccgat ctcgtcgccg taatagatga
      181 tcggcgtgcc cggcatcgag aacagcagcg aattcaacaa ctcgatcttg cgccggtcgt
      241 tctccatcaa cggcgccagc cggcggcgga tgccgacgtt gacgcgcgcc cgccggtcgg
      301 cggcataggt ctcccacagg taatcgcgct ccttgtcggt gaccatttcc agcgtcagtt
      361 cgtcgtggtt gcgcaggaag atggcccatt ggcagcggct ggggatgtcg ggggtctggc
      421 gcaggatgtc ggtgatcggg tgccggtcct cgcgcgcgat ggccatgtac atgcgcggca
      481 tcagcgggaa gtggaacgcc atgtggcatt cgtcggcatt gccgaaatag ggcagcacgt
      541 cctcgggcca ttggttggcc tcggccacga agatgcggcc gggatggctt tcatccagcg
      601 cccgccgcaa ttgcttcagg atggcgtgcg tctcgggcag gttctcgttg ttggtgccct
      661 cgcgttcgca caggtatggc acggcgtcga gcctgaggcc gtcgatgccc atgtccagcc
      721 agtgccgcat caccgcgatg acctcgcgca ccacgcgggg attgtcgaag ttgaggtcgg
      781 gctggtgcga gaagaagcgg tgccaataga acgccttggc ctcgtcgtcc caggcccagt
      841 tggacttctc ggtgtcggtg aagatgatgc gggtgcccag gtatttctgg tcgctgtcgg
      901 accagacgta atagtcccgc gccgcactgc ccgcccgcgc ccgccgcgcc cgctggaacc
      961 agggatgctg gtccgaggtg tggttgatga ccagctcggt caccaccttg agcccgcgcg
     1021 catgggcctc gcggacgaac agccggaagt ccttgaggtt gccgtaggcc ggattgatgt
     1081 tgcggtaatc ggcgatgtcg tagccgtcgt ccttgagcgg cgacggatag aacggcagca
     1141 gccacagggt atcgaccccc aattgctgaa cgtagtcgag cttctcggtc aggccccgga
     1201 agtcgccctt gccgtcattg tcggaatcga agaacgcctt gatgtgcagt tggtagagga
     1261 tggcgtcctt gaaccagagg ggatccatgg ggctttctcc ggttggatat tttccgtcac
     1321 ccccgcgaag gcgggggtcc atgccggaca ccggtcaggc ggcgccatgg attcccgcct
     1381 tcgcgggaat gacgaagtcc tcaaaaacac ggcgtccggt aatcgacgct gttccacacg
     1441 gtgacgcgga agatggcggc ggggttgagc ttggggtcga ggcgcagctt gtgggcggca
     1501 ccgcgccaca gatggcgctc gccggtcaac agctcctcga cctcgaaggt ttcccccgcc
     1561 ggcacgccca tggcgtccag cgggaaggtc agcacggtgt cgcgggcgtc gaacgggtcc
     1621 agcgtcaccg ccacgaagat catgttcgag cggtccagcg tggacttgcc gtagaacagc
     1681 accgaatcgt ccgaggactg gtggaagcgg acgttctcga actcgtgcag ggcggggttg
     1741 tcgcggcgga tgcggttgat gcgggtgatg tcgtccttga tgttgccggc gcggttccag
     1801 tcccagacct tgaactggta cttctcggaa tgcaggtatt cctccttgcc cggcaccgcc
     1861 gccgcctcgc acagctcata gccgttgtag atgccgtaga cgctggcaag cgtcgccgcc
     1921 agcaccagcc ggatgcgaaa ggcggcgcgg ccgccggtct gcaggaaggg cggcaggatg
     1981 tcgggggtgg tcggccagaa attggggcgc atgtagtcgt gcgcctcgcc ctgggccaac
     2041 tcggccatgt aatcggccag ctcgtgcttg aagttgcgcc aggtgaaata ggtgtaggac
     2101 tgggtgaagc ccgccttggc caaggcccgc atcagcttgg gccgggtgaa ggcttcggac
     2161 aggaagatga cgtcgggata ttgctcctgc accgtggcga tcagccattc ccagaacggg
     2221 atcggcttgg tgtgcgggtt gtcgacgcgg aaaatgcgca ccccctcgcc cgcccagaac
     2281 atcaccacgc ccagcaattc ctgccacagc gcctgggcgc cctggccgtg gaactcgacg
     2341 ttgacgatgt cctggtactt cttgggcggg ttctcggcat atttgatggt gccgtcgggg
     2401 cgccagttga accattcggg atgcgccttg atccagggat ggtcgggggc gcattggatg
     2461 gcgaagtcca gcgccacctc catgccgtgg cgcttcacct cggcgacgaa atggcggaag
     2521 tcgtcgaggg taccgagatc agggtggatg gcggtgtggc cgccctcgac gctgccgatg
     2581 gcataggggc tgccggggtc gcccggcccc gccaccaggg tgttgtcggg acccttgcgg
     2641 tggacgcggc cgatggggtg gatgggcagc agatagacca cgtcgaagcc catgcgggcg
     2701 atctcgggca ggcgcttctc ggcatccttg aaggtggcgg atttcttagg gtccgagcct
     2761 tggctgcgaa ccatgatctc gtaccacgcg gcgaagcggg cggcgacgcg gtccaccacc
     2821 acctcgaaca ggccgggatg acggaccgcc ttcgacagat cgggccagcg cgccatgatg
     2881 gcgcggacca aggttgaccc catcaaatcg gcgcgatcgc cttcgtcgtc ggtgcggtca
     2941 aggtcggcca gcacccgttc cagccgctcg cggtcggcgc cctggacgcg cggcagcgca
     3001 ttgttcagca ggcggcgacc ctcgaccagt tcgaccggca
//
LOCUS       DATIKR010000760         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_96577, whole genome shotgun sequence.
ACCESSION   DATIKR010000760 DATIKR010000000
VERSION     DATIKR010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96577"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1653
                     /locus_tag="VLL76_11970"
     CDS             <1..1653
                     /locus_tag="VLL76_11970"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV30271.1"
                     /translation="AAIGSYQWARALEGVHYGTVVAALKQIEMLREGGIEIPDELADI
                     VKPPTVVVFTGHALDRPGEGPHFPPGLEATVRAEIAKSLDELDAQIGYCMAACGSDLL
                     FIEAMLERGAEVNIVMPFALEDFIANDVRYAGPRWEMRFKNALKLAASVTYATEERFL
                     GHETLYRFANQCLHGLSTLRSGFLKTQPYLLAVWDMMPGSLVGGAADFIDQWEDITKL
                     RIIDLDGLLQQHPDLCGEDGPALPNLDFGEPEEDGEGRVIRSMLFCDIAGYSKLKEEN
                     IPAFLEFLRRLKDGVAEAGIEPSSINTWGDAIFAVMDKATPMAEYALKLQEVVKRLGE
                     EMIDQLPNPLTLRISLHAGPVFEAIDPIRNNKNYYGSHINRAARLEPVTVIGHVYATQ
                     QFVAVLTAEQSAMRSEAMSNGEDFAERFVCEYVGVLSLAKDFGKQTVYHLRRRTPADT
                     HVAGQLDEPSSVAEPDPVAPAEEPESWDQVLDHDEPALPPDDDLDVEIHPVTAAEAPQ
                     PKADRQQVEDVLEKVARMMKKAEEADGEGIVLSEDEVHWPGV"
BASE COUNT          368 a          718 c          644 g          316 t
ORIGIN      
        1 gccgcgatcg gctcgtacca atgggcccgc gcgctggaag gcgtgcatta cggcaccgtc
       61 gtcgccgcct tgaagcagat cgagatgctg cgcgagggcg gcatcgagat ccccgacgaa
      121 ctggccgaca tcgtcaagcc gcccaccgtg gtggtgttca ccggccacgc gctcgaccgc
      181 cccggcgagg gcccgcactt cccgcccggc ctggaagcca ccgtgcgcgc cgagatcgcc
      241 aagagcctgg acgaactgga cgcccagatc ggctattgca tggcggcctg cggctcggac
      301 ctgctgttca tcgaggccat gctggaacgc ggcgccgagg tcaacatcgt gatgcccttc
      361 gcgctcgagg acttcatcgc caacgacgtc cgctatgccg ggccgcgctg ggagatgcgc
      421 ttcaagaacg cgctgaagct ggccgcgtcg gtgacctatg ccaccgagga gcgcttcctc
      481 gggcacgaga cgctgtaccg cttcgccaac cagtgcctgc acggcctgtc gacgctgcgc
      541 tcgggcttcc tcaagaccca gccctacctg ctggccgtat gggacatgat gcccggctct
      601 ctggtcggcg gcgccgccga cttcatcgac cagtgggaag acatcaccaa gctgcgcatc
      661 atcgacctgg acggcctgtt gcagcagcac cccgacctgt gcggcgagga cggccccgcc
      721 ctccccaacc tggatttcgg cgagcccgag gaagacggcg agggccgcgt catccgctcg
      781 atgctgttct gcgacatcgc cggctattcc aagctgaagg aagagaacat cccggccttc
      841 ctggaattcc tgcggcgcct gaaggacggc gtggcggaag ccgggatcga gccgtcgtcc
      901 atcaacacct ggggcgacgc catcttcgcg gtgatggaca aggccacgcc catggccgaa
      961 tacgccctga agctgcagga ggtggtcaag cgcctgggcg aggagatgat cgaccagttg
     1021 cccaacccgc tgaccctgcg catctcgctg catgccgggc cggtgttcga ggccatcgac
     1081 cccatccgca acaacaagaa ttattacggc agccacatca accgcgccgc ccgcctggaa
     1141 ccggtcaccg tgatcggcca cgtctacgcc acccagcaat tcgtcgcggt gctgaccgcc
     1201 gaacaatcgg cgatgcgctc ggaagccatg agcaacggcg aggattttgc cgagcggttc
     1261 gtctgcgaat atgtcggcgt gctgtcgctg gccaaggatt tcggcaagca gaccgtctat
     1321 cacctgcgcc gccgcacccc cgccgacacc catgtcgccg gccagttgga cgagccgtca
     1381 agcgtggctg agccggaccc cgttgcgcct gccgaagagc cggaaagctg ggaccaggtg
     1441 ctggaccacg acgagccggc cctgccgccc gacgacgacc tggacgtgga aatccacccc
     1501 gtcaccgccg cggaggcgcc gcagcccaag gccgaccgcc agcaggtcga ggacgtgctg
     1561 gaaaaggtcg cccgcatgat gaagaaggcg gaagaagccg acggcgaagg catcgtcctg
     1621 tccgaggacg aggtccactg gccgggagtg taatagtcca atgtcatcct gaggcgaagc
     1681 ccacggctgt ccggtcaaaa ttccaataga ggcgacgaaa tgcccgcccc gcctcggctc
     1741 gacggccggc gcatggtcaa ggaacacgga aaaggggagg ccggctacgc cggcatggga
     1801 tgaaggcgac aggccatcgc ggaaccgcgt gcgatgcctc ccctccgtcc ccttggccgc
     1861 tgtgcggcca tccccttcat ctccgtcttc ttttcgggtg cctgccgctc acgctttaca
     1921 acatcgtcat ggccgggctt gacccacggc tgtccggttt agcttcggcc cccggccccc
     1981 agactcgtca cccccgcgaa ggcgggggtc catgggtccg cccggctttg ccctcaaccc
     2041 attgtc
//
LOCUS       DATIKR010000761         1989 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_34728, whole genome shotgun sequence.
ACCESSION   DATIKR010000761 DATIKR010000000
VERSION     DATIKR010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34728"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VLL76_11975"
     CDS             complement(<1..634)
                     /locus_tag="VLL76_11975"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HSV30272.1"
                     /translation="MAFNYGAGFIVKRRKQGWVLAAIIAANIGALIWFKYANTFLGLM
                     ADAGLPLTIDKVLFPLAISFFTFRQIAYVIDVRNGVAEIPGFAEYAFVITFFPNLIAG
                     PLVRHSEMVQQLRAGALRPDWTNFAVGVTLFSIGLFKKVVLSEMARPYADRVFDGAPV
                     IEHLTFVTAWTGSLAYGLQIYFDFSGYSDMAIGLARMFGFKLPLNFHSPYK"
     gene            complement(944..1019)
                     /locus_tag="VLL76_11980"
     tRNA            complement(944..1019)
                     /locus_tag="VLL76_11980"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(984..986),aa:Ala,seq:cgc)
     gene            1170..1469
                     /locus_tag="VLL76_11985"
     CDS             1170..1469
                     /locus_tag="VLL76_11985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HSV30273.1"
                     /translation="MDIILVPLLMVIYYALEIYWWVVLAMVIFSWLLAFGVVNTYNNA
                     VRTIGDVLHRLTEPVLRPIRRIMPDVGPVDLSPIALWLLIMFLQMVVRRLMIAVA"
     gene            1472..1795
                     /locus_tag="VLL76_11990"
     CDS             1472..1795
                     /locus_tag="VLL76_11990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HSV30274.1"
                     /translation="MAGGPFTPAAGGIRVAVRLTPKASRDRVEGLAPEADGGQVLKVS
                     VTAVPEDGKANAALIKLLSKQWRVAKSSIDIVQGATDRRKVLHVSGDPDDLEAQLHEW
                     MAKIK"
     gene            1792..>1989
                     /locus_tag="VLL76_11995"
     CDS             1792..>1989
                     /locus_tag="VLL76_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrofolate dehydrogenase/cyclohydrolase
                     catalytic domain-containing protein"
                     /protein_id="HSV30275.1"
                     /translation="MTTAKILDGNLFSADLRDQIGKRVHEIRDYNHVVPGLAVVLVGE
                     DPASQVYVKSKHKRAVECGMHS"
BASE COUNT          410 a          610 c          644 g          325 t
ORIGIN      
        1 ccttgtaggg cgaatggaaa ttcagcggca gcttgaagcc gaacatgcgg gccaggccga
       61 tggccatgtc ggaatagccg gaaaagtcga aatagatttg caggccatag gccagcgagc
      121 cggtccaggc ggtcacgaag gtcagatgct cgatcaccgg cgcgccgtcg aacacgcggt
      181 cggcataggg gcgggccatc tcggacagca cgaccttctt gaacaatccg atcgagaaca
      241 aggtgacgcc gacggcgaaa ttggtccagt cgggccgcaa ggccccggcg cgcagttgct
      301 ggaccatctc ggaatggcgc accagcggcc cggcgatcag attggggaag aacgtgatga
      361 cgaaggcgta ttcggcgaag ccggggattt cggcgacgcc gtttcggacg tcgatgacgt
      421 aggcgatctg gcggaaggtg aagaacgaga tggcgagcgg gaacagcacc ttgtcgatcg
      481 tcaacggcag cccggcatcc gccatcaagc ccaggaaggt gttcgcgtat ttgaaccaga
      541 tcagggcgcc gatgttggcg gcgatgatcg cggccagcac ccagccctgc ttgcgccgct
      601 tcacgatgaa gccggcgccg taattaaagg ccatcgacac gaagatgacc gccaacaaaa
      661 gctggttgtg ccagctatag aatacgaggg acgaggcgat gaggagcgcg atggccgcag
      721 cgttgccttt ccacgtcccg atcaccgtaa aaagtaaaaa gacgatcggc aggaagaaaa
      781 gaaggaaggc tacgctagaa aaatccatcg cactaattcc ggtgggaaag ccggcagcag
      841 cctataggct gggccgaatc tggtcaaggc gacttggacc cgagcgtttt ggggcctgag
      901 aacccaacaa aaaaccccgg cgtttccgcc ggggtcgaat tcttggtgga gctgagggga
      961 atcgaacccc tgacctccgc agtgcgattg cggcgctctc ccatctgagc tacagcccca
     1021 agaggccgag aacataggga aaggcggata gcgtgtcaag cggcgcatcg gcgcccgcgc
     1081 gggcatcccc caacccccgt ccccttgcgc gcaggcgcgc ctgtggttag ggttgcgcga
     1141 tcttttttct cacgccgagg ttccggtcga tggacatcat cctcgtcccc ctgctgatgg
     1201 tcatctacta cgcgctcgag atctattggt gggtcgtcct cgccatggtg atcttcagct
     1261 ggctgctggc cttcggcgtg gtcaacacct acaacaacgc cgtgcgcacc atcggcgacg
     1321 tgctgcaccg cctgaccgag ccggtgctgc ggcccatccg ccgcatcatg cccgatgtcg
     1381 gaccggtcga tctgtcgccc atcgcgctgt ggctgctgat catgttcctg cagatggtgg
     1441 tgcgccggct gatgatcgcc gtcgcctgac catggcgggc ggcccgttca cgcctgccgc
     1501 cggcggcatc cgcgtcgcgg tgcggctgac ccccaaggcg tcgcgcgacc gcgtcgaggg
     1561 actggcgccc gaggcggacg gcggccaggt gctgaaggtg tcggtgaccg ccgtgcccga
     1621 ggacggcaag gcgaacgcgg cgctgatcaa gctgttgtcc aagcaatggc gcgtggcgaa
     1681 gtcgtccatc gacatcgtcc agggcgccac cgaccggcgc aaggtgctcc acgtttccgg
     1741 cgaccccgat gatctcgagg cccaactcca cgaatggatg gcaaaaataa aatgaccacg
     1801 gcaaagatcc tcgacggcaa cctgttctcc gccgacctgc gcgaccagat cggcaagcgc
     1861 gtccacgaga ttcgcgacta caaccacgtg gtgcccggcc ttgcggtggt gctggtgggc
     1921 gaggacccgg ccagccaggt ctacgtcaaa tccaagcaca agcgcgccgt cgaatgcggc
     1981 atgcactcg
//
LOCUS       DATIKR010000762         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_217290, whole genome shotgun sequence.
ACCESSION   DATIKR010000762 DATIKR010000000
VERSION     DATIKR010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217290"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VLL76_12000"
     CDS             complement(<1..523)
                     /locus_tag="VLL76_12000"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV30276.1"
                     /translation="MEPPPAPKPRSPPALVGLLLLALLYTLYLTAEIVLPVLVASLLA
                     LVLGPLAVRLKRWGLPRGIAAAIVTAAFVAAIGWGVQMLATPAAQWLERAPQSFGEIE
                     RKLRPVKEPVEQVQRATKQVERLAGGEDDDRNTVSVKGFDLGRLFVVSAGQLLAQSLV
                     VVVLLYFLLASGER"
     gene            complement(570..>2488)
                     /locus_tag="VLL76_12005"
     CDS             complement(570..>2488)
                     /locus_tag="VLL76_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV30277.1"
                     /translation="DDAIVVVENIVRHWQMRKGEDAAQVAVEAVAEVGNPTIVATLTI
                     IAALLPMMFVSGLMGPYMSPIPANASSAMVFSFFVAVIITPWLLLKIAGRNRGGHHGH
                     SDRLGDFYRNRARPILEGRDKSKKLLLGVTLATLLAMMMFPLKAVTVKLLPFDNKSEL
                     QVVADLPEGATLEDTDRVLAAAALRLKDLPELTSIQAYAGTAAPFNFNGLVRHSYLRQ
                     SPELGDLQLNLQSRHDRSRASHDIALDARERLKDLPMPAGTALRVVEVPPGPPVLATL
                     LAEIYGPTAEARRATAAQVRQAFEKVDFVVDIDDTLASPWQRLRVSIDQERLEFFGVE
                     QQAVYDTIQALMGGVKVGYSHRGEGANPKEIFISLPKSDKHPGELLATTPVPARNGIV
                     ELGDVVEVTYESASPPIFRRDGRFAEMVQAELAGRYEAPIYGMFAVEDHLPEGVEVAY
                     HGQPRDESKTTLLWDGEWEITYVTFRDMGAAFGVAILGIYLLVVAQFGSFRLPLVILV
                     PVPLTLIGIVIGHMLFNAPFTATSMIGFIALAGIIVRNSILLVDFIRHRLGEGATLRQ
                     ALLDSGATRFKPIFLTAAAAMIGAAFILADPIFQGLAISMVFGLLSSTALTLLVIPAL
                     YVWLRDDGKGFGTR"
BASE COUNT          420 a          824 c          885 g          359 t
ORIGIN      
        1 tgcgctcgcc cgacgccagc aggaagtaca gcagcacgac caccaccagg ctttgcgcca
       61 gcaattggcc ggcgctgacc acgaacaggc ggcccaaatc gaagcccttg accgacacgg
      121 tgttgcggtc atcgtcctcg ccgccggcca ggcgttcgac ctgcttggtg gcgcgctgga
      181 cctgttcgac cggctccttg accggccgca gcttgcgctc gatctcgccg aagctttgcg
      241 gcgcccgctc cagccactgg gcggccggcg tcgccagcat ctgcacgccc cagccgatcg
      301 cggcgacgaa ggcggcggtg acgatggcgg cggcgatgcc gcgcggcagg ccccaccgct
      361 tcaggcgcac cgccagcggc ccaagcacca gcgccagcag cgacgccacc agcacgggca
      421 gcacgatctc ggcggtcagg tacagggtat agagcagcgc cagcagcagc agcccgacaa
      481 gcgcgggcgg cgagcgcggc ttcggtgcgg gcggcggctc catcccgcac aggtgggcgc
      541 gggatggagg aatgaaaagc cctgctcgcc tatcgcgtcc cgaacccctt gccgtcgtcg
      601 cgcagccaca cgtacagcgc cgggatcacc agcagggtca gggcggtgga ggacagcagg
      661 ccgaatacca tgctgatcgc caggccctgg aagatcgggt cggccaggat gaaggcggcg
      721 ccgatcatgg ccgcggcggc ggtcaggaag atgggcttga aacgggtggc gcccgaatcc
      781 agcagggcct ggcgcagggt ggcaccctcg ccgagacgat ggcggatgaa gtccaccagc
      841 aggatcgagt tgcgcacgat gatgccggcc agggcgatga agccgatcat cgaggtcgcg
      901 gtgaagggcg cgttgaacaa catgtggccg atgacgatgc cgatcagcgt cagcggcacc
      961 ggcaccagga tcaccagcgg caggcggaag ctgccgaact gggccaccac cagcagatag
     1021 atgcccagga tggcgacgcc gaaagcggcg cccatgtcgc ggaaggtcac ataggtgatc
     1081 tcccactcgc cgtcccacag cagggtggtc ttgctctcgt cgcgcggctg gccgtgatag
     1141 gcgacctcca cgccctcggg cagatggtcc tcgaccgcga acatgccgta gatgggcgcc
     1201 tcgtagcggc cggccagttc ggcctgcacc atctcggcga agcggccgtc gcggcggaag
     1261 atgggcgggc tggccgattc ataggtgact tcgaccacgt cgccaagctc gacgatgccg
     1321 ttgcgcgcgg gcaccggcgt ggttgccagc aattcgcccg gatgcttgtc ggacttgggc
     1381 agggaaatga agatttcctt ggggttggcg ccctcaccgc gatgggaata gccgaccttc
     1441 accccgccca tcagggcctg gatggtgtcg tagaccgcct gctgctcgac cccgaagaac
     1501 tcgagccgct cctggtcgat ggacacgcgc aggcgctgcc acgggctggc cagggtgtcg
     1561 tcgatgtcga cgacgaaatc caccttctcg aaggcctggc gcacctgggc cgcggttgcg
     1621 cggcgggcct cggcggtggg gccgtagatc tcggccagca gggtcgccag caccggcggg
     1681 ccgggcggca cctcgaccac gcgcaaagcg gtgccggcgg gcatgggcag gtccttgagc
     1741 cgctcgcggg cgtccagcgc gatgtcgtgg ctggcgcgcg agcggtcgtg gcgcgattgc
     1801 aggttaagct gcaggtcgcc cagttccggg ctttggcgca ggtaggaatg gcgcaccagg
     1861 ccgttgaagt tgaacggcgc ggcggtgccg gcataggcct ggatgctggt cagctcgggc
     1921 aggtccttca gccgcagggc ggcggcggcc agcacccggt cggtgtcctc cagcgtggcg
     1981 ccctcgggca ggtcggccac cacctgcagc tcggacttgt tgtcgaacgg cagcagcttc
     2041 accgtcaccg ccttgagcgg gaacatcatc atcgccagca gggtcgccag cgtcacgccc
     2101 agcagcagct tcttcgactt gtcgcggcct tccaggatgg gccgggcgcg gttgcggtag
     2161 aagtcgccca ggcggtcgga atggccgtgg tggccgcccc ggttgcgccc cgcgatcttc
     2221 aacagcagcc acggcgtgat gatgacggcg acgaagaacg agaacaccat ggccgacgag
     2281 gcgttggccg ggatcgggct catgtagggc cccatcaggc ccgacacgaa catcatgggc
     2341 aacagggcgg cgatgatggt gagcgtcgcg acgatggtcg ggttgccgac ctctgccacc
     2401 gcctcgacgg cgacttgggc ggcgtcctca cccttacgca tctgccagtg gcggacgatg
     2461 ttctcgacca ccacgatggc gtcgtcca
//
LOCUS       DATIKR010000763         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_108358, whole genome shotgun sequence.
ACCESSION   DATIKR010000763 DATIKR010000000
VERSION     DATIKR010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108358"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..854
                     /locus_tag="VLL76_12010"
     CDS             <1..854
                     /locus_tag="VLL76_12010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV30278.1"
                     /translation="PSPADLEREVAERMAAEQEVRSINRGLEQRVLDRTRALERAKDE
                     AIRANQAKTRFLAAASHDLRQPFQALRLFFEVLDQRLADHAVRPVLDMAKQALDGGES
                     LLHALLDISTLQAGTVKIRPVRFVVDEVLQQVANEMGPTAAAKGIVLRVVPCRTEVVN
                     DPVLVKRLVRNLVSNAVRYTDRGRILLGCRRSGGRVRIEVWDTGIGIPESARQEIFEE
                     FTQLGNPERDRTKGLGLGLAIVRRLAQLLDTELDLDSEVGRGTVFRVTLPHTLPAGAP
                     MPEEIGA"
     gene            complement(851..2032)
                     /locus_tag="VLL76_12015"
     CDS             complement(851..2032)
                     /locus_tag="VLL76_12015"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV30279.1"
                     /translation="MNRIPAVLPVLAVTTTAQALVSLAMLTLPAIAPEMARDLGVSAR
                     LVGWWISMAYGAAMLTSLMGATTVRRLGAARTTQIALLLMTAGTLANALAWLPGVVAG
                     ALLVGLGYGMTNPAAAHLLARSSSPANRNVVFSVKQTGVPVGGAVAGLMAPALVVTFG
                     WQSAPAAVALFALVLVLVIVPARAAWDGDRDPEAPLRANPFEGLHAIWRSPALRDLSL
                     AGFAYAAVQLSLSTFLVTMLVTDLRWSLVEAGLLLSAVQVVGVVGRILAGIVADRWFG
                     GRATLVGLGLITASFACATGFLQPDWPVVAIYLVLICYGTAALGWNGVYLAEVAHAAP
                     ANQLAIVTGASLFFTYGGVLVGPPAFAALQGIVGSYTATYALAALPAVVGVALLARKR
                     A"
BASE COUNT          366 a          742 c          775 g          257 t
ORIGIN      
        1 tgcccagccc ggccgatctg gagcgcgagg tggccgagcg catggcggcc gagcaggagg
       61 ttcgctcgat caaccgtggc ctcgaacagc gcgtgctcga ccgcacccgg gcgctggagc
      121 gcgccaagga cgaggccatc cgcgccaacc aggccaagac gcgcttcctg gccgccgcca
      181 gccacgattt gcgccagccg ttccaagcgt tgcggctgtt cttcgaggtg ctcgaccagc
      241 gcctcgccga ccatgccgtg cgcccggtgc tcgacatggc gaagcaggcg ctggacggcg
      301 gcgaaagcct gctgcacgca ctgctcgaca tctcgacgct gcaggcgggc acggtcaaga
      361 tccggccggt gcggttcgtc gtcgacgaag tgctgcaaca ggtcgccaac gagatggggc
      421 cgacggcggc ggccaagggg atcgtgctca gggtggtgcc gtgccggacc gaggtcgtca
      481 acgaccccgt gctggtcaag cgcctggtgc gcaatctggt gtccaacgcg gtgcgctaca
      541 ccgaccgggg ccgcattctg ctgggctgcc gccgcagcgg cggccgggtc cggatcgagg
      601 tgtgggatac cggcatcggc atcccggaaa gcgcccggca ggaaatcttc gaggaattca
      661 cccagctcgg caatcccgag cgcgaccgca ccaaggggct gggccttggc ctcgccatcg
      721 taaggcggtt ggcccagttg ctggacaccg aactggacct agactccgaa gtcggccggg
      781 gcacggtttt ccgcgtcacc ttgccgcata ccctgccggc cggcgcgcca atgcccgagg
      841 aaatcggcgc ctaggctctt ttccgtgcca gcagcgccac gccgaccaca gcgggcaggg
      901 ccgccagggc gtaggtcgcc gtgtagctgc cgacgatccc ctgcagcgcc gcgaaggcag
      961 gcgggccgac caggacgccg ccataggtga agaacagcga ggcgccggtg acgatcgcca
     1021 attggttggc cggtgcggcg tgggcgacct cggccaggta gacgccgttc cagcccagcg
     1081 ccgccgtgcc gtagcagatc agcaccagat agatcgccac gacaggccaa tcgggttgca
     1141 gaaagccggt cgcacaggcg aacgaggcgg tgatgaggcc cagcccgacc agggtggcgc
     1201 ggccgccgaa ccagcggtcg gcgacgatgc cggccaggat gcggccgacc acgcccacca
     1261 cctggacggc cgacagcagc aggccggcct cgaccaggct ccagcgcagg tcggtgacca
     1321 gcatggtgac caggaaggtg gacaggctga gctgcacggc ggcataggcg aagccggcca
     1381 gcgacaggtc gcgcagcgcc ggcgagcgcc agatggcgtg caggccctcg aacggattgg
     1441 cccgcaacgg cgcctcggga tcgcggtcgc cgtcccaggc ggcgcgggcg ggtacgatca
     1501 ccagcaccag caccagggcg aacagggcca cggcagcggg tgccgattgc cagccgaacg
     1561 tcaccaccag ggccggcgcc atcaggccgg cgacggcgcc gcccaccggc acgccggtct
     1621 gcttgaccga gaacaccacg ttgcggttgg ccggcgacga cgaccgcgcc agcagatgcg
     1681 ccgccgccgg gttggtcatg ccatagccca ggccgaccag cagcgccccc gccaccaccc
     1741 ccggcagcca cgccagcgcg ttggcgagcg tgccggcggt catcagcagc agggcgatct
     1801 gggtggttcg ggcggcgccc agccggcgca cagtggtcgc ccccatcagc gaggtcagca
     1861 tggccgcgcc ataggccatg ctgatccacc agcccaccaa tcgggccgag acgcccaggt
     1921 cgcgcgccat ctcgggcgcg atggcgggca gggtcagcat ggccagcgac accagcgcct
     1981 gggcggtggt ggtgacggca agcacgggca gcacggcggg gatgcggttc atggtcactc
     2041 gcttctgcac tggtgcgacc attgcggtca acagccgggg aagcagggcg gggttgcgcg
     2101 gccgcagggg cgggcctaga acaaaggcat gaaggtcttc
//
LOCUS       DATIKR010000764         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59251, whole genome shotgun sequence.
ACCESSION   DATIKR010000764 DATIKR010000000
VERSION     DATIKR010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59251"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VLL76_12020"
     CDS             complement(<1..472)
                     /locus_tag="VLL76_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSV30280.1"
                     /translation="MLQKLVKATGAAGLGSSSRPTAGLSVIGPDVRIVGDIITKGEMQ
                     IDGEVEGDIACQTLVVGEGARIAGAVTAETVRVHGELNGRIEAETVVIARSARVVGDV
                     THTSLEIEAGAQLEGHIARKAGAAKPAPAPVADKKVNGAAHPHHPASRSAIEAAP"
     gene            complement(453..1664)
                     /locus_tag="VLL76_12025"
     CDS             complement(453..1664)
                     /locus_tag="VLL76_12025"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSV30281.1"
                     /translation="MAERKQCLDLRGRRAKAVKAIVERVLPEWQVFVRLPNGRGRHFT
                     LSRDRQLTLLGGVAAMGLWAVASTLMLTHQPDALAAKERELEELLAANRAAQHRLAAA
                     EKMVGEIAREVDSVHSSVVALAESNVSLVKDKPAAKSAVKVAARAIGAEPAFDDGALP
                     GGSESKAVREQVRNLESSLERLRVATTRAVQQTADAAGERIAETGRQLSKLGLDPEKL
                     VATERKRGGQGGPFIPVGAGPVHADDGLDKLMARMDHLNGINAALQRMPLAAPILADY
                     EFNSGFGTRSDPLNHRTGVHEGVDFGAPVGTPVYATGGGTVTLAEPWDRYGNTVEIDH
                     GNGVTTRYAHLSKIKVKEGQRVTRSTVIGLVGNTGRSTGPHLHYEVRVSDAPRDPVKF
                     ISVGRDAAKAR"
     gene            complement(1783..>2086)
                     /locus_tag="VLL76_12030"
     CDS             complement(1783..>2086)
                     /locus_tag="VLL76_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30282.1"
                     /translation="IAAVGSLAPLEMAELSATDAVLAPVAEATNGSVRYLSDGGVPAL
                     RRVGPDRVASGRDWIGLVARGDHVVSGVREVPLLPAALLLLAALGGLLAAWRREGR"
BASE COUNT          294 a          719 c          745 g          328 t
ORIGIN      
        1 ccggcgcggc ctcgatggcg gagcgcgacg ccggatggtg cggatgcgcc gcgccgttga
       61 ccttcttgtc ggcgaccggc gcgggggccg gtttggcggc gccggccttg cgggcgatat
      121 ggccctcgag ctgggcgccg gcctcgatct ccagcgaggt gtgggtgacg tcgccgacca
      181 cgcgggccga gcgggcgatc accacggtct cggcctcgat gcggccgttc agttcgccat
      241 gcacgcgcac ggtctcggcg gtgacggcgc cggcgatcct ggcgccctcg cccaccacca
      301 gggtctggca ggcgatgtcg ccctcgacct cgccgtcgat ctgcatttcg cccttggtga
      361 tgatgtcgcc gacgatgcgc acgtcggggc cgatgaccga caggccggcg gtggggcgcg
      421 acgacgatcc gaggccggcg gcgccggtgg ccttaacgag cttttgcagc atcacgtcct
      481 accgagatga atttgacggg gtcgcgcggc gcgtccgaca cccgcacttc gtaatgcaga
      541 tgcgggccgg tcgagcggcc ggtgttgccg accaggccga tgacggtcga gcgcgtcacc
      601 ctttgccctt ccttgacctt gatcttggac agatgggcat agcgggtggt gacgccgttg
      661 ccgtggtcga tctcgacggt gttgccgtag cggtcccacg gctcggccag ggtcacggtg
      721 ccgccaccgg tggcgtagac cggggtgccg acgggtgcgc cgaaatcgac gccttcgtga
      781 acgccggtac ggtggttgag cgggtcgctg cgggtgccga agccgctgtt gaattcgtaa
      841 tcggccaaga tgggcgccgc cagcggcatg cgctgcagcg ccgcgttgat gccgttcaaa
      901 tggtccatgc gggccatcag cttgtccagc ccgtcgtcgg catgcaccgg cccggcgccg
      961 accggaatga aggggccgcc ctggccgccg cgcttgcgtt cggtggcgac cagcttttcg
     1021 gggtcgaggc ccagcttgga caattgccgg ccggtctcgg cgatacgctc gccggcggca
     1081 tcggcggtct gctgcaccgc gcgggtggtg gcgacccgca ggcgctcgag cgaggattcc
     1141 aggttgcgca cctgctcgcg caccgccttg gattcgctgc cgcccggcag ggcgccgtcg
     1201 tcgaaggccg gctcggcgcc gatggcgcgg gcggcgacct tgacggccga cttggcggcg
     1261 ggcttgtcct tgaccaggga aacgttggat tccgccaggg cgacgacgct ggaatgcacc
     1321 gaatcgacct cgcgggcgat ctcgcccacc atcttctcgg cggcggccag gcggtgctgg
     1381 gcggcgcggt tggcggccag cagctcttcc agctcgcgtt ccttggcggc cagggcatcg
     1441 ggctggtggg tcagcatcag ggtcgaggcg acggcccaca ggcccatggc ggcgacgccg
     1501 cccagaaggg tcagctggcg gtcgcgcgac agcgtgaaat gacggccccg gccattgggc
     1561 aggcggacga acacctgcca ttccggcagc acccgttcga cgatcgcctt gacggccttg
     1621 gcccgcctcc ccctgaggtc gaggcactgc ttcctttccg ccactgagct tgccccctca
     1681 cttgcggatt gtccctgtgc acttgtcagg gagtttacct aggacagccc cgttaatcta
     1741 taggtaataa attccgtcga tagatcgatt cggaaaaccc gatcagcgac cctcgcgccg
     1801 ccaggccgcc aaaagcccac ccaaggcggc gaggaggagc agcgcggcgg gcagcaacgg
     1861 cacctcgcgc acgccggaaa ccacatggtc gccgcgcgcc accagcccga tccagtcgcg
     1921 ccccgaggcc acccggtcgg ggccgacccg gcgcagggcg ggcacgccgc catccgacag
     1981 atagcgcacc gacccattgg tggcctcggc caccggagcc agcaccgcat cggtcgccga
     2041 cagctcggcc atctccagcg gggccaggct gccgacggcg gcgatg
//
LOCUS       DATIKR010000765         3414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_120007, whole genome shotgun sequence.
ACCESSION   DATIKR010000765 DATIKR010000000
VERSION     DATIKR010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120007"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="VLL76_12035"
     CDS             complement(<1..457)
                     /locus_tag="VLL76_12035"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF013180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSV30283.1"
                     /translation="MAPIDPVITLACIAALFASLVWIAHLRKKVASAQARMDFLLHSD
                     PLTGLPNHMLARDRLERLIAYASRGGSKVAVTAVDVDDFKSVNDSAGHLVGDALIQDV
                     AGRLRNAVRDSDTVSRQNADEFLVLLGDIRDVDATTRVAGKLQDALAHPF"
     gene            complement(463..666)
                     /locus_tag="VLL76_12040"
     CDS             complement(463..666)
                     /locus_tag="VLL76_12040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30284.1"
                     /translation="MMNARRISDLLDKALDDTGDPRRLIDRILAEAMASGLDWRDIMS
                     AIDLAERRTGLRLHPVGFRTERS"
     gene            complement(684..2381)
                     /locus_tag="VLL76_12045"
     CDS             complement(684..2381)
                     /locus_tag="VLL76_12045"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HSV30285.1"
                     /translation="MRAINKLGVRAKIAIAPAFLGLIMIAVGSYGAIMLRSNAESVEQ
                     LNSQVIGRGAELEEFADRAARSVTMLYRLVSIATAETDEQKLVRLAAQATAEFKEIAT
                     QLDGTRAIGDELGVDPAVTEAARTSVGKYLKSAAVVTDMLETDVGTALTMMSVTERNF
                     TKASEDLRHLTEAIADIRSQRTSELLSSMRSVGTVFFTAVLVATAVGGVVTFSLSLGI
                     TRPIQSLTVTVGRLAARDYAVEIDGTDGHDEIAAMARAVAELKTIGMVAERLAAERET
                     EQQKTLQRAEAIERLAAGFDQSVATMLDKVLAAAQEMEGCASGMSANAEQTTRQAAAV
                     AAATEHASSSVATAAAATEQLSASIAEIGRQVDASNQVSRMVAEESERTSQIVGSLTE
                     ASAHIGQVVTLINDIARQTNMLALNATIEAARAGEAGRGFAVVAGEVKNLANETGRAT
                     DEIGEQIAAVQTATAEATDAITGIVQRIQEIREISAAVAAAVEEQAAATSEIARNVQQ
                     SAEGTHEVNDNISGVSRAATGTGAAARQVLDSAQGLVHQAQALKGEVGDFLTAIRSC"
     gene            complement(2411..2869)
                     /locus_tag="VLL76_12050"
     CDS             complement(2411..2869)
                     /locus_tag="VLL76_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV30286.1"
                     /translation="MKIVACMTVAAALVIGTGAHAADQGTPDEAVAMTKKAVAAIRSE
                     GAEKVYSAIIAKDARFVDRDLYVIVYDLTGKCLAHGANPKLVGKDLIDNQDVDGTYYI
                     KDRMELAKAKASFWQDYKFTNPTTKKIEPKSTYCEREGATTVCVGVYKNQ"
     gene            complement(3001..>3414)
                     /locus_tag="VLL76_12055"
     CDS             complement(3001..>3414)
                     /locus_tag="VLL76_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV30287.1"
                     /translation="PVVVMSGVAVEKDVFACIQAGAKGFLPKTLDGPVFTAAVSLVAS
                     GGTYVPTEFMVSPQHPQPTVEASGSLDPSDFSEREIALLRMVVAAASNKEIARAFDLQ
                     EVTIKFYLTRIFRKMGVKNRSHAAVMAVRSGLIRE"
BASE COUNT          500 a         1084 c         1193 g          637 t
ORIGIN      
        1 ggaagggatg ggccagggca tcctgcagct tgccggcgac ccgcgtggtg gcgtccacgt
       61 cgcggatgtc gcccagcagc accaggaatt cgtcggcgtt ctggcggctg acggtgtcgc
      121 tgtcgcgcac ggcgttcctc agccggccgg cgacgtcctg gatcagcgcg tcccccacca
      181 gatgcccggc ggaatcgttg accgatttga agtcgtccac atcgacggcg gtgaccgcca
      241 ccttggaacc gccacggctg gcataggcga tcaagcgctc gaggcggtcc cttgccagca
      301 tgtggttggg caagcccgtc aacggatcgc tgtggagcag gaaatccatg cgggcctggg
      361 ccgacgcgac cttcttgcga agatgcgcga tccagacaag gctggcgaac agcgcggcga
      421 tgcacgccag ggtgatgacg ggatcgatgg gcgccatgat ggtcagctcc gctccgtccg
      481 gaagccgacc gggtggagcc gcagtccggt gcggcgttcc gccagatcga tggcgctcat
      541 gatgtcgcgc caatccagac ccgacgccat ggcttcggcg aggatgcggt cgatcaggcg
      601 ccggggatcg ccggtgtcgt ccagggcctt gtccagcagg tcggaaatgc gtcgcgcgtt
      661 catcattcct gacccgtcgc cgctcagcag gacctgatgg ccgtcaggaa gtcgccgacc
      721 tcgcccttca aggcctgagc ttgatggacg agtccttggg ccgagtccag gacctggcgc
      781 gcggccgctc cggttcccgt cgccgcgcgc gacacgccgg agatgttgtc gttgacctcg
      841 tgggtgccct cggcgctttg ctggacgttg cgggcgatct cggaggtcgc ggccgcctgc
      901 tcctcgacgg cggcggcgac ggcggccgag atctcgcgga tttcctggat gcgctggacg
      961 atgccggtga tcgcgtcggt ggcttcggcg gtggcggtct ggaccgcggc gatctgctcg
     1021 ccgatttcgt cggtggcgcg gccggtctcg ttggccaggt tcttgacctc ccccgcgacc
     1081 acagcgaagc ctcggccggc ctcgccggcg cgggccgcct cgatggtggc gttgagcgcc
     1141 agcatgttgg tctggcgggc gatgtcgttg atcagggtga ccacttggcc gatatgggcc
     1201 gaggcttcgg tcagcgagcc gacgatctgg ctggtgcgct cgctctcttc ggcgaccatc
     1261 cgcgacacct ggttggacgc atcgacctgc cgcccgatct cggcgatgga tgcggacaat
     1321 tgctcggtgg cggcggcggc ggtggcgacg ctggacgagg cgtgctcggt ggcggcggcg
     1381 acggcggcgg cctggcgcgt ggtctgctcg gcattggccg acatgccgct ggcgcagccc
     1441 tccatttcct gggcggcggc aagaaccttg tccagcatgg ttgcgacgga ttggtcgaat
     1501 ccggccgcca ggcgttcgat ggcctcggcg cgctgcaggg tcttttgctg ttccgtctca
     1561 cgttccgcgg ccaggcgttc ggccaccatt cctatggtct tcagttccgc gacggcgcgc
     1621 gccatcgcgg cgatttcgtc gtgcccgtcg gtcccgtcga tctcgaccgc gtaatcccgg
     1681 gccgccaacc ggccaacggt gaccgtcagg gactggatcg gccgggtgat gccaagcgac
     1741 agggagaagg tcaccacgcc gcccacggcg gtcgccacca gcacggcggt gaagaagacg
     1801 gtccccaccg accgcatgga tgacagcagt tccgaggtcc gctgcgatcg gatgtcggcg
     1861 atcgcctcgg tcagatggcg caggtcctcg gacgccttgg tgaagttccg ctcggtgacg
     1921 gacatcatgg tcagggcggt gccgacatcg gtctccagca tgtcggtgac gaccgccgcg
     1981 cttttcaggt acttgccgac actggtccgg gcggcctcgg tgaccgccgg atcgacgcct
     2041 aattcgtcgc cgatggcgcg cgtgccatcc aactgggtgg cgatctcctt gaattcggcg
     2101 gtggcctggg ccgccaggcg gaccaacttc tgctcgtcgg tctcggcggt ggcgatcgac
     2161 accaggcggt acagcatggt gaccgaccgg gccgcacggt cggcgaattc ctcgagttcg
     2221 gcgccccgcc cgatgacctg cgaattcagt tgctcgaccg attccgcatt ggagcgcagc
     2281 atgatcgcgc cgtagctgcc gacggcgatc atgatcaggc cgagaaaagc gggggcgatg
     2341 gcgatcttcg cccggacccc gagtttgttg atcgcgcgca tgacgcctcc cgtttccctg
     2401 accggccgga ttattggttc ttgtagacgc cgacgcagac ggtggtggca ccctcacgtt
     2461 cgcaataggt ggatttcggc tcgattttct tggtggtcgg gttggtgaac ttgtagtcct
     2521 gccagaacga ggccttcgcc ttggccagct ccatccggtc cttgatgtag taggtaccgt
     2581 ccacgtcctg gttgtcgatc aggtccttgc cgaccagctt gggattggcg ccatgggcca
     2641 ggcacttgcc ggtcaggtca tagacgatca cgtacagatc gcggtccacg aagcgcgcat
     2701 ccttggcgat gatggcggaa tagacctttt cggcgccttc gctgcggatg gcggcgaccg
     2761 ccttcttggt catggcgacg gcctcgtcgg gcgtgccctg gtcggcggcg tgtgcgccgg
     2821 ttccgatgac cagcgcggcg gcgacggtca tacaggcgac tatcttcatg ggtgtggtct
     2881 ccgtcagtga cgcgaacgtt ttcgttcgtc accgacagag tgggccgggg gcggcaaata
     2941 tgcgcgctcg ctgaagtcta acgagcagac tccaggcgct atccaacggc taaagggggg
     3001 ctattcgcgg atcaggccgg accgcaccgc catgacggcg gcgtgcgagc ggttctttac
     3061 ccccatcttg cggaagatcc gggtcaggta gaacttgatg gtgacctcct ggaggtcgaa
     3121 ggcgcgtgcg atctccttgt tcgacgccgc cgccaccacc atgcgcagca gcgcgatctc
     3181 gcgttcgctg aagtcgctgg ggtcgagcga cccactcgct tcgacggtcg gctgcgggtg
     3241 ttgcggcgag accatgaatt ccgtcggaac gtaggtgccg ccgctggcga ccagggagac
     3301 ggcggccgtg aagaccggtc cgtcgagggt cttgggcagg aagcccttgg cgccagcctg
     3361 gatgcaggcg aacacgtcct tttcgacggc gacgcccgac atgacgacca ccgg
//
LOCUS       DATIKR010000766         5338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_11503, whole genome shotgun sequence.
ACCESSION   DATIKR010000766 DATIKR010000000
VERSION     DATIKR010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11503"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1328)
                     /locus_tag="VLL76_12060"
     CDS             complement(<1..1328)
                     /locus_tag="VLL76_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSV30288.1"
                     /translation="MSVSRLTRWGAASAFALSLVTLPAAAQVFNPTTYTLGNGMQVVV
                     VENHRAPIATHMVWYRVGAADEPAGKSGIAHLLEHLMFKGTPEIPPGQFSKIVARNGG
                     RDNAFTSSDYTAYFQNIAIDRLELVMKMEADRMRNLTLDDQNVVTERAVVLEERSSRT
                     DNDPSALLMERVEATLYLNHPYRRPVIGWGSELAGLTRADAEAFYRTWYAPNNAILVV
                     AGDVKPDEVKALAEKYYGPLKPENTPDRQKLRAEEPPQVAARRVVLEDARVQQPSWSR
                     QYVAPSYTHGRKELAYPLQVLSEILGGGATSRMYKSLVVEQGVAAGASAWYDPSALDS
                     STFGLGATPRPGVPMDKLEAALNAEIAKVAQGITAEEVERAKARLKANVAYARDSLHT
                     AARVLGEALTTGQSVADVEAWPERIAAVTPEQVNEAARAVLDERASVTGVL"
     gene            1508..2956
                     /locus_tag="VLL76_12065"
     CDS             1508..2956
                     /locus_tag="VLL76_12065"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HSV30289.1"
                     /translation="MPDSLSPAPVKTALFLDFDNVYLSLQALNPQAAEIFATSPEVWL
                     DWIASGKHVDDPTAIRRNILVRRCYLNPQVFWRHRTHFTRSAFNVVDCPPLTSTKNSA
                     DIYMVMDILDTLEHSTRFDEFVILSADADFTPVLLRLRTHDRRTSILANQLAAPAFKA
                     ACDTVIDIDDFIEEALGIHEERQGYDWVLPDVAARLRETIEAQGPLEASALATVFREF
                     PSFMNSNWFGFRRLRPLAEKLTEYEATLQLTADSGHSWEVQIRGMADGQARKTVGGTR
                     DDIIEAARRIVTNSPAPKLLASLGNELADDLGVWVKQSGWGGAGTLSSLLAGAKLPDL
                     AVTMVHPMQAYDPNRHDIEDVDRIPPDLRPLVDSICKITGCPRLPTEDYRAIYEEIAA
                     VANESPGMPMNEASRIIRDRLADKDVPVGRNTVAFVLQGLQVNGYVMEEGDEAQVVAQ
                     AFSDNVEQLCRNAGLELSDDERSQFYAWMTGG"
     gene            complement(2993..3565)
                     /locus_tag="VLL76_12070"
     CDS             complement(2993..3565)
                     /locus_tag="VLL76_12070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3035 domain-containing protein"
                     /protein_id="HSV30290.1"
                     /translation="MTIRIATPHALRAVASAAILVLGLSGCSDVKRAIGFEKAPPDEF
                     QVVERAPLAMPPDFSLRPPAPGAVRPQEGSTRDQARQALLGRTAQISTQGRTQGDMAL
                     LKKAGAENAQADIRILVNKETQSLAEADKSFTDKLVFWSKSAPYGEALDPAKEAQRLR
                     ENQALGKAVTDGETPVIKRRKRGMLEGVFD"
     gene            complement(3570..4067)
                     /gene="lspA"
                     /locus_tag="VLL76_12075"
     CDS             complement(3570..4067)
                     /gene="lspA"
                     /locus_tag="VLL76_12075"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HSV30291.1"
                     /translation="MRLGLAFAAAIMVADQASKAWIIELMRPEGVWEVPFHSATRIEV
                     TPFFNLVMAWNRGVSFGIFNNGGQWNAILLTVLALAISVGLVAWMRKATNKWVALALG
                     GIVGGAIGNVIDRIRFGAVADFLDVHVMGYHWPAFNLADSAITVGAVVLILDSLFARP
                     TSSKN"
     gene            complement(4076..>5338)
                     /locus_tag="VLL76_12080"
     CDS             complement(4076..>5338)
                     /locus_tag="VLL76_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSV30292.1"
                     /translation="FALDPAGLLGADAQHYDKTGHTLDVWFDSGVTHACVLKRRPELA
                     HPADLYLEGSDQHRGWFQSSLLEGCGTRGRAPYDNVLTHGFVLDEDGRKMSKSLGNVV
                     SPQEVVSAMGADILRLWVIGSDYSDDLRIGKEILKTQVDIYRRLRNTLRYLLGALDGF
                     SDGEKLPVAEMPELERWVLHRLSELDAGLKQACADFEFHNWFNELHNFCGVDLSAFYF
                     DIRKDALYCDAQDSLRRRAARTVMDILLDTLCKWLAPFLCFTAEEAWLARHPSEDGSV
                     HLEAFPVIPAAWRDETLAAKWAKVRQVRKVVTGALEVERSAKRIGSSLQANPLLYVDG
                     NFYPAIEDVDMAELCITSGLLVIEGPTPDNCFTLPDVPGVGVAPRPAEGEKCQRCWKV
                     LHEVGKRGHDGVCGRCSDAVDSLTPAAE"
BASE COUNT          909 a         1744 c         1780 g          905 t
ORIGIN      
        1 agcacgccgg tgaccgaggc gcgttcgtcc agcacggccc gggccgcctc gttgacctgt
       61 tcgggggtga cggcggcgat gcgttccggc cacgcctcga cgtcggcgac actctggccg
      121 gtagtcagcg cctcgcccag cacgcgggcg gcggtgtgca gcgaatcgcg ggcataggcg
      181 acgttggcct tcaggcgggc cttggcgcgc tcgacctcct cggcggtgat gccctgggcc
      241 accttggcga tttcggcgtt cagcgccgct tccagcttgt ccatgggcac gccggggcgc
      301 ggggtggcgc ccaggccgaa ggtgctgctg tccagcgccg acgggtcgta ccaggcgctg
      361 gcgccggcgg cgacgccctg ctccaccacc agcgacttgt acatgcggct ggtggcgcca
      421 ccccccagga tctcggacag cacctgcagc ggataggcca gttccttgcg gccgtgggta
      481 tagctgggag cgacgtattg gcggctccac gacggctgct gcacccgcgc gtcctccagc
      541 accacccggc gggcggcgac ctggggcggc tcctcggccc gcagtttctg gcggtcgggg
      601 gtgttctcgg gcttcagcgg gccgtaatac ttctcggcca gcgccttgac ctcgtccggt
      661 ttgacgtcgc cggcgacgac caggatggcg ttgttggggg cgtaccaggt gcgatagaac
      721 gcttcggcgt cggcgcgggt caggcccgcc aactcggaac cccagccgat cacggggcgg
      781 cgataggggt ggttgaggta cagggtcgcc tcgacccgct ccatcagcag ggcgctgggg
      841 tcgttgtcgg tgcgcgagct gcgctcttcc agcaccacgg cgcgctcggt gaccacgttc
      901 tggtcgtcga gcgtcaggtt gcgcatgcgg tcggcttcca tcttcatcac cagttccagc
      961 cggtcgatgg cgatgttctg gaaataggcg gtgtagtccg acgaggtgaa ggcgttgtcg
     1021 cggccgccgt tgcgcgccac gatcttcgag aactggcccg gcgggatctc gggcgtgccc
     1081 ttgaacatca ggtgttccag caggtgcgcg atgccgctct tgcccgccgg ctcgtcggcg
     1141 gcgccgacgc ggtaccacac catgtgggtg gcgatgggcg cgcggtggtt ctcgaccacc
     1201 accacctgca tgccgttgcc cagggtatag gtggtggggt tgaacacctg cgctgcggca
     1261 ggcaacgtga ccagcgacag ggcgaaggcc gaagccgcgc cccaccgcgt cagacgagaa
     1321 accgacatgt gtcctcccgg cgaacccctg ttgcccgcga atatgggcgc ggaagcgggt
     1381 gcgggcaagg gcgctcgatc catcgaacgg gcggccattg aatgactctg ctccggccga
     1441 tacactatca tcagtagatg cagacgcagc cttcaatgcg ttgtgcgcgc aatcgaagga
     1501 cagcaccatg cccgactctt tgtcgcctgc gcccgtcaag accgctcttt tcctggactt
     1561 cgacaacgtt tacctttcgt tgcaggcctt gaacccgcaa gcggctgaaa tcttcgcgac
     1621 cagccccgaa gtatggctgg actggatcgc gagcggaaag cacgtcgatg atccaacagc
     1681 aatccgccgc aacatcctgg tgcgccggtg ctatctcaac ccacaagttt tctggcgaca
     1741 tcgcacccat ttcacccgct cggcgttcaa cgtcgtcgat tgcccgcccc tgacatcgac
     1801 caagaacagc gcggatatct atatggtcat ggatatcctc gacactcttg agcattccac
     1861 gcgcttcgac gaattcgtca ttctttccgc cgatgcggat ttcacgcccg ttctgctgcg
     1921 ccttcggacg cacgaccgtc ggacctcgat actagccaac caattggccg cacctgcctt
     1981 caaggccgcc tgcgacaccg tcatcgacat cgacgatttc atcgaggagg ctctgggcat
     2041 ccacgaggaa cgacagggat atgactgggt gttgcccgat gtcgccgcca ggctgcgcga
     2101 gaccatcgag gcccaggggc ctctcgaagc gtcggccctt gccacggttt tccgggagtt
     2161 ccccagcttc atgaacagca actggttcgg cttccgcagg ctgcgtccac tggccgagaa
     2221 attgacggaa tatgaggcga cgctccagtt gaccgcggat tccggccata gctgggaagt
     2281 ccaaatccgc gggatggcgg atgggcaagc gcgcaagacc gtggggggaa cccgcgacga
     2341 catcatcgag gcggcccggc gtatcgtgac caactccccg gcaccaaaac tgctggccag
     2401 cttagggaac gaactggccg atgacctcgg tgtgtgggtc aagcaaagcg gttggggtgg
     2461 agccgggaca ctgagcagtc tgctggccgg ggccaagctg cccgacctgg ccgtcaccat
     2521 ggtccacccg atgcaggcct atgatcccaa ccgtcacgat atcgaggatg tcgatcggat
     2581 cccacccgat ctgcggccgc tggtggacag catatgcaag atcaccggct gcccgcgcct
     2641 gcccaccgaa gattaccgcg ccatttatga ggaaatcgcc gctgtcgcca atgaatcgcc
     2701 ggggatgccg atgaacgaag cgtcgcggat catccgggat cggcttgccg acaaggatgt
     2761 tccggtcggc cgcaacaccg ttgcgttcgt cctgcagggg ctgcaggtca atggctacgt
     2821 gatggaagag ggggatgagg cccaggtcgt ggcccaggcg ttcagcgaca acgtggaaca
     2881 actgtgtcgt aacgccggac tggaactgag cgacgacgag aggtcccagt tctatgcctg
     2941 gatgaccgga ggctgaggcc gggaccgggg ggaagccccc ccggagccgc cgtcagtcga
     3001 acacgccttc cagcatgccg cgcttgcggc gcttgatgac cggggtttcg ccgtcggtga
     3061 cggccttgcc gagcgcttgg ttctcgcgca ggcgctgggc ctcctttgcc gggtccagcg
     3121 cctcgccata gggggccgac ttggaccaga acaccagctt gtcggtgaag ctcttgtcgg
     3181 cttcggccag cgactgggtt tccttgttga ccaggatgcg gatgtcggcc tgggcgtttt
     3241 cggcgcctgc cttcttcagc agcgccatgt cgccctgggt gcggccctgg gtcgagatct
     3301 gggcggtgcg gcccagcaag gcctggcggg cctggtcgcg ggtcgagcct tcctgcgggc
     3361 ggacggcgcc gggcgccggc gggcgcagcg aaaagtcggg cggcatggcc agcggcgcgc
     3421 gctcgaccac ctggaattcg tcgggcgggg ccttctcgaa gccgatcgcg cgcttcacgt
     3481 cggagcaacc cgacaggccg agcacgagga tggcggccga ggcgacggcg cggagggcgt
     3541 ggggcgtggc tatgcgaatc gtcatggacc taattcttag acgaagtggg gcgcgcgaac
     3601 aaggagtcga gaataagcac gaccgcaccg accgtaatgg ccgaatcggc caaattgaag
     3661 gcaggccaat gatagcccat cacatggacg tccaggaagt ccgcaaccgc gccgaaacgg
     3721 atgcggtcga tgacgttgcc gatggcgccg ccgacgatgc cgcccagcgc cagcgcaacc
     3781 catttgttgg ttgccttgcg catccacgcc accagtccga cgctgatcgc cagcgccagc
     3841 acggtcagca ggatggcgtt ccattggccg ccgttgttga agatgccgaa gctgacgccc
     3901 cggttccacg ccatcaccag gttgaagaac ggcgtcacct cgatgcgggt ggcggaatgg
     3961 aacggcacct cccacacgcc ctcgggccgc atcagctcga tgatccaggc cttcgaggcc
     4021 tggtcggcca ccatgatcgc cgccgcgaag gcgaggccga gccgcatcat gccgcctact
     4081 ccgccgccgg ggtcaggctg tccaccgcat ccgagcagcg gccgcagacg ccgtcatggc
     4141 cgcgcttgcc gacctcgtgc agcaccttcc agcagcgctg gcacttctcg ccctcggccg
     4201 ggcgcggcgc cacgccgaca ccgggcacgt cgggcagggt gaagcaattg tccggggtcg
     4261 gcccctcgat caccagcagg cccgaggtga tgcacagctc ggccatgtcc acgtcctcga
     4321 tggcaggata gaaattgccg tccacgtaaa gcagcggatt ggcctgcagc gacgagccga
     4381 tgcgcttggc gctgcgttcc acttccaatg caccggtgac caccttgcgc acctgacgca
     4441 ccttcgccca cttggccgcc agcgtttcgt cgcgccatgc ggccgggatg acggggaagg
     4501 cttccagatg caccgaaccg tcctcggacg gatggcgcgc cagccaggct tcctcggcgg
     4561 tgaagcacag gaagggcgcc agccacttgc acagggtgtc gagcaggatg tccatcaccg
     4621 tgcgggcggc acggcggcgc aggctgtcct gggcgtcgca atacagcgcg tccttgcgga
     4681 tgtcgaaata gaaggccgac agatcgacgc cgcagaaatt gtgcagttcg ttgaaccagt
     4741 tgtggaactc gaaatcggca caggcctgct tgagccccgc atccagttcg ctcaggcggt
     4801 gcagaaccca gcgctccagc tcgggcatct cggcgaccgg caatttctcg ccatcggaga
     4861 agccgtcgag cgcgcccagc aggtagcgca acgtgttgcg caggcggcgg tagatgtcga
     4921 cctgggtctt caggatctcc ttgccgatgc gcaggtcgtc ggaataatcc gagccgatca
     4981 cccacaggcg caggatgtcg gcgcccatgg ccgacacgac ctcttgcggg gacaccacgt
     5041 tgcccagcga cttcgacatc ttgcggccgt cctcgtcgag cacgaagccg tgggtcagca
     5101 cgttgtcgta gggcgcgcgg ccgcgggtgc cgcagccttc cagcagcgac gactggaacc
     5161 agccgcgatg ctggtccgag ccttcgagat agagatccgc cgggtgcgcc aactccgggc
     5221 ggcgcttgag cacgcaggcg tgggtcacgc ccgaatcgaa ccacacgtcg agcgtgtggc
     5281 cggtcttgtc gtagtgttgg gcgtcagcgc ccagcagtcc ggccgggtcg agcgcgaa
//
LOCUS       DATIKR010000767         2454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59295, whole genome shotgun sequence.
ACCESSION   DATIKR010000767 DATIKR010000000
VERSION     DATIKR010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59295"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VLL76_12085"
     CDS             <1..433
                     /locus_tag="VLL76_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV30293.1"
                     /translation="ADLGVELTESVLMSDPERANEVLGQLRTMGVSIAIDDFGTGYSS
                     LNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVKAIVNLGHSLGTRVNVEGVETIEQLD
                     FLLAHGVDEAQGFYFSRPVPPDVFARLVREKSPFALAPNPV"
     gene            625..1779
                     /locus_tag="VLL76_12090"
     CDS             625..1779
                     /locus_tag="VLL76_12090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HSV30294.1"
                     /translation="MLTHLQTVKGWAFVALSALLILVLSSRAVAREQAIGRSLKNSEA
                     KFRATFSQTAMGMAHVGLDGRWLMVNDRLCDIVGYPAAELQAMTFQDITFPADRAADD
                     RAVEALHGGADDCVFEKRYVRRDGLPVWVQLTANLVRDCQGKPAFYIVAVQEIEDRKR
                     SEAALRAALKEKEVLLGEIHHRVRNNLQLVLSTLALKSAQINDTKARRTFDEALARVH
                     AIALVHHHLYESRDFGRIDFAVYARDLCNSLMQVAAPEGIALDFRLDDFECDPSRVIP
                     LGVILVELVTNSIKYAFPDGRPGTISVRLRRYPHDHVVLEVADDGVGLGQPVDSLDDT
                     PAGTNCGLKLVRMLSGQLNGRLVHCPTPGGGTSLRIELGCADCPTAALCH"
     gene            complement(1768..>2454)
                     /locus_tag="VLL76_12095"
     CDS             complement(1768..>2454)
                     /locus_tag="VLL76_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HSV30295.1"
                     /translation="AERRTGAAHLPCPAVRAAVPSPFDYPAQTRVMVVTDVRKDDMEQ
                     VAAAYRELFLASGGGGLGLFTAISRLRAVHKRIAPPLDDAGIALLAQHVDSMDTGTIV
                     DIFRAEEDSCLLGTDAVRDGVDVPGRSLRLIVFDRVPWPRPDILHKARRAHFGGKAYD
                     DMITRLRLKQAYGRLVRRAGDHGVFVLLDPMMPSRLFGAFPDGVEVRKVGLAEAVAVT
                     RQFLVPPSVA"
BASE COUNT          401 a          811 c          831 g          411 t
ORIGIN      
        1 agccgacctg ggcgtggagc tgaccgagag cgtgctgatg tccgacccgg agcgtgccaa
       61 cgaggtgctg ggccagctgc gcacgatggg cgtgagcatc gccatcgacg atttcggcac
      121 cggctattcg tcgctgaact acctgaagcg cttcccggtg gacaagctga agatcgaccg
      181 gtccttcgtg gtcgacatcg gcctgcaccc cgacaacgcc gccgtggtca aggccatcgt
      241 caacctgggc cacagcctgg gcacgcgggt caacgtggaa ggcgtggaaa ccatcgaaca
      301 attggacttc ctgttggccc acggggtgga cgaggcccag ggcttctatt tcagccgccc
      361 ggttccaccc gatgtattcg cccgtctggt gcgcgagaaa agcccgttcg cgctggcccc
      421 caacccggtg tgacggggca ttcgaggtag aggctttcaa agctcgggaa tcggtcggcg
      481 gacgagcgta tctcagagcg gatgaagccg cttgcgcgat ccctttttct gggcttgtcg
      541 gtcgcggcca cctatgccgt ggccgggatt ctgtggattt tgttttccga ccgcgcggtt
      601 cagtccatcg cggacgacgt ccgattgctg actcatctgc aaaccgtcaa gggctgggcc
      661 ttcgtcgcct tgtcggcgct gctgatcctg gtgctgagca gccgcgcggt ggcgcgcgag
      721 caggcgatcg gacggtcgct caagaattcc gaggccaagt tccgggccac cttcagccag
      781 accgccatgg gcatggccca tgtcgggctc gacgggcgat ggctgatggt caacgaccgc
      841 ctgtgcgaca tcgtcggcta ccccgccgcg gagcttcagg cgatgacctt ccaggacatc
      901 acctttcccg ccgaccgtgc cgccgacgat cgcgccgtcg aagcgctgca tggcggtgcc
      961 gacgattgcg tgttcgagaa gcgctatgtc cgccgcgacg gcctgccggt ctgggtgcaa
     1021 ttgacggcga acctggtgcg cgactgtcag ggcaagccgg ccttctacat cgtcgcggtg
     1081 caggagatcg aggaccgcaa gcgctccgag gcggcgctga gggccgcgct caaggaaaag
     1141 gaagtgctgc tgggcgagat ccatcacagg gtccgtaaca acctgcaact ggtgctcagt
     1201 accctggcgc tgaaatcggc gcagatcaac gacaccaagg cccgccggac cttcgacgag
     1261 gcgctggccc gcgtccacgc catcgcgctg gttcaccatc atttgtacga aagccgcgac
     1321 ttcggccgca tcgacttcgc cgtctacgcc cgcgatttgt gcaattcgct gatgcaggtg
     1381 gccgcgccgg aaggcatcgc gctggacttc cggctggacg atttcgaatg cgaccccagc
     1441 cgggtcatac ctttgggcgt gatcctggtc gaactggtga ccaattccat caagtacgcc
     1501 tttcccgatg gccggccggg caccatctcg gtgcggctgc gccgctatcc gcatgaccac
     1561 gtggtgctgg aggtggcgga cgatggcgtc ggccttggtc aaccggtcga ttcgctggac
     1621 gacactccgg ccggcaccaa ttgcggcctc aagctggtgc gcatgctgtc cggccaactc
     1681 aatggccgcc ttgtccactg cccgacgccc ggtggtggca ccagcctgcg catcgagttg
     1741 gggtgcgcgg attgcccgac ggcggcgcta tgccactgac ggcggcacca ggaactgccg
     1801 cgtcactgcg accgcctcgg ccaggccgac cttcctgacc tcgacgccgt cggggaacgc
     1861 cccgaacagc cggctgggca tcatggggtc cagcagcacg aacacgccgt ggtcgccagc
     1921 gcggcggacc aggcggccat aggcctgctt caggcgcagc cgcgtgatca tgtcgtcata
     1981 ggccttgccg ccgaaatggg cgcgccgtgc cttgtgcagg atgtcggggc gcggccaggg
     2041 gacgcggtcg aacacgatca ggcgcagcga gcggcccggc acgtcgacgc cgtcccgcac
     2101 cgcgtcggtg cccaacaggc aggaatcttc ctcggcgcgg aagatgtcga cgatggtgcc
     2161 ggtgtccatg ctgtccacgt gctgcgccaa aagcgcgatg cccgcatcgt ccagcggcgg
     2221 ggcgatgcgc ttgtgcacgg cgcgcaggcg cgagatggcg gtgaacagcc ccaacccgcc
     2281 gccgcccgag gccaggaaca gctcgcgata ggcggcggcg acctgctcca tgtcgtcctt
     2341 gcgcacatcg gtcaccacca tcacccgggt ctgggcggga tagtcgaacg gcgacggcac
     2401 ggcggcgcgc acggccgggc agggcaggtg ggcggcgccg gtgcggcgct cggc
//
LOCUS       DATIKR010000768         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59298, whole genome shotgun sequence.
ACCESSION   DATIKR010000768 DATIKR010000000
VERSION     DATIKR010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59298"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1466)
                     /locus_tag="VLL76_12100"
     CDS             complement(<1..1466)
                     /locus_tag="VLL76_12100"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HSV30296.1"
                     /translation="MTDFAFHELFPLSHDDTPYRKITADGIGTASLNGKTVVTVEPEA
                     ITKLTYEAIKDTSHLLRPGHLAQIRKIIDDPESSPNDKFVAFDLLKNACIAAGGTLPM
                     CQDTGTAIVMGKKGQLVFTGGNDEAAISKGVQQAYTDLNLRYSQTAPLNMYDEVNTGT
                     NLPAQIDLFATEGDAYKFMFMAKGGGSANKTFLYQQTKALLNPASLLKFLDAQIRTLG
                     TSACPPYHLAIVIGGLSAEMTLKTVKLASARYLDSLPTSGNKYGQAFRDVELEQVVLK
                     MTQDMGIGAQFGGKYFCHDVRVIRLPRHGASCPVAIGVSCSADRQILGKITKDGVYVE
                     ALEKDPAKYLPEIDTSKLSGEVVKIDLNRPMDEIRKTLSQYPIKTRVSLTGPMIVARD
                     IAHAKLKERLDRGEGLPEYFKQLGVYYAGPAKTPEGMPSGSFGPTTAGRMDSYVDQFQ
                     AAGGSMLMIAKGNRSNAVTEACKKHGGFYLGSIGGAAAR"
     gene            complement(1675..2193)
                     /locus_tag="VLL76_12105"
     CDS             complement(1675..2193)
                     /locus_tag="VLL76_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HSV30297.1"
                     /translation="MAEDGFRYDKMVEDALRGVVRDAIDQAAKIGLTGEHHFYITFHT
                     RHPGTKVPDYILARHPDEMTIVLQHQFWGLELDDEAFEVTLSFSGVSERLRVPFGAIT
                     GFADPSAKFGLQFQVEDGDDEEYDDDEGEAADVVEFKADPAMLSEDKDKPEVPAGGDD
                     NKVVALDAFRKK"
     gene            2734..2858
                     /locus_tag="VLL76_12110"
                     /pseudo
     CDS             2734..2858
                     /locus_tag="VLL76_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611557.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
BASE COUNT          460 a          907 c          964 g          527 t
ORIGIN      
        1 cgggcggcgg cgccgccgat ggagccgagg tagaagccgc cgtgcttctt gcaggcctcg
       61 gtgacggcgt tcgagcggtt gcccttggcg atcatcagca tggagccgcc ggcggcctgg
      121 aactggtcga cgtagctgtc catgcggccg gcggtggttg ggccgaacga gccggacggc
      181 atgccctcgg gggtcttggc cgggccggcg taatagacgc ccaactgctt gaaatactcg
      241 ggcaggccct cgccgcgatc caggcgttcc ttgagcttgg cgtgggcgat gtcgcgggcg
      301 acgatcatcg ggccggtcag ggacacgcgg gtcttgatcg ggtattggct cagcgtcttg
      361 cggatctcgt ccatgggacg gttgaggtcg atcttgacca cctcgcccga cagcttcgag
      421 gtgtcgatct cgggcaggta cttggcggga tccttctcca gcgcctcgac atagacgccg
      481 tccttggtga tcttgcccag gatctggcgg tcggccgagc acgacacgcc gatcgccacc
      541 gggcacgagg cgccgtggcg cggcaggcgg atgacgcgga cgtcgtggca gaaatacttg
      601 ccgccgaact gggcgccgat gcccatgtcc tgggtcatct tcagcaccac ctgctccagc
      661 tccacgtcgc ggaaggcctg gccgtacttg ttgcccgagg taggcagcga gtcgaggtag
      721 cgggccgagg ccagcttgac ggtcttcagc gtcatctcgg ccgacaggcc gccgataacg
      781 atcgcgaggt gatagggcgg gcaggccgag gtgcccaggg tgcggatctg cgcgtcgagg
      841 aacttcagca gcgaggccgg gttcagcagc gccttggtct gctgatacag gaaggtcttg
      901 ttggccgacc cgccgccctt ggccatgaac atgaacttgt aggcatcgcc ctcggtggcg
      961 aacaggtcga tctgcgccgg caggttggtg ccggtgttga cctcgtcata catgttcaag
     1021 ggcgcggtct gggaatagcg caggttcagg tccgtatagg cctgctgcac gcccttcgag
     1081 atcgccgcct cgtcgttgcc gccggtgaag accaactggc ccttcttgcc catcacgatg
     1141 gcggtgccgg tatcctggca catgggcagg gtgccgccgg cggcgatgca ggcgttcttc
     1201 agcaggtcga aggcgacgaa cttgtcgttg gggctggact cggggtcgtc gatgatcttg
     1261 cggatttgcg ccagatggcc gggacgcagc aggtgcgagg tgtccttgat ggcctcgtag
     1321 gtcagcttgg tgatggcctc gggttcgacg gtgacgaccg tcttgccgtt caggctggcg
     1381 gtgccgatgc cgtccgcggt gatcttgcga tagggcgtgt cgtcgtgcga cagcgggaac
     1441 agctcgtgga aggcgaaatc ggtcatcgga cggcctcggc tcgcggtcta aggacaaggg
     1501 tgggcctcac ccaccaggga aggtaggaac cacctttttg ccgggtcggt caagaggggc
     1561 ggtgcttcgc cacatgatgt cactctgagg cgcagccgaa gagtctttca agcaggggcg
     1621 gcaaccgcct cgggtgaaag atgcttcgct gcgctcagca tgacaggcaa agcactattt
     1681 cttccggaag gcgtccagcg ccacgacctt gttgtcgtcg ccgccggccg ggacctcggg
     1741 cttgtccttg tcctcggaca gcatggcggg gtcggccttg aactcgacca cgtcggcggc
     1801 ctcgccctcg tcgtcgtcgt actcctcgtc gtcgccgtcc tcgacctgga actgcaggcc
     1861 gaacttggcc gacggatcgg cgaagccggt gatggcgccg aacggcacgc gcaggcgctc
     1921 ggacacgccc gagaacgaca gggtgacctc gaacgcctcg tcatccagtt ccaggcccca
     1981 gaactggtgc tgcagcacga tggtcatttc gtcgggatga cgggccagga tgtagtcggg
     2041 gaccttggtg ccggggtggc gggtatggaa ggtgatgtag aaatggtgct cgccggtcag
     2101 gccgatcttg gccgcctggt cgatggcgtc gcgaaccacg ccgcgcaacg cgtcttccac
     2161 catcttgtcg tatcgaaagc cgtcctcggc catacccctt gcccctagat gcaaaaacgt
     2221 aagtgggggg acttctgttg cccggcgccc cccgaaccgc gcttacggat tacgccgcag
     2281 cggcaagagc aacgttgtcg ttggcacttg tgaggtttag cccgataacg gtggtaccat
     2341 gccgagcaca agctatgtct ttactacccg cgtcgatcct gtttcgcccc cagagttccc
     2401 ggcgatgccg ggaggctttg gtggaggcgc cgggtaccgc ccccgggtcc gcaaggccta
     2461 ttccacataa cgtttagcgc catagtcggg cgaacccgac aagcccaata tagtgcacct
     2521 gggccggatg cgccacaccc catctgcaag cttttttcag cgcatgcggg ggagcggccg
     2581 ccagccctag cggcaaccgg cgccatgcga cgcgcgcagg atcgccgtca catcgtctcc
     2641 cgatggcaac cgcatctcgg cgtcgatgcg gccgccacgc cccgccccca ccagcccggc
     2701 caaggcatcg cgtgccgccc gcgcttcgcg ataggcaggc tccgcgacgc atgcctcaac
     2761 gagacgctgt ttgcctcact accccacgcc cgccgcgtcc tggctcactg gcgggacgat
     2821 tacacccatg cgccgacccc atctcctcga taccgccg
//
LOCUS       DATIKR010000769         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59308, whole genome shotgun sequence.
ACCESSION   DATIKR010000769 DATIKR010000000
VERSION     DATIKR010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59308"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..890
                     /locus_tag="VLL76_12115"
     CDS             <1..890
                     /locus_tag="VLL76_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008332310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HSV30298.1"
                     /translation="LVRGAVGVARRAGVSELAIGLTLVGAMTSAPEMVVSVQAALAGQ
                     AGLALGNVVGSNTANLLLIMGAGGLVRPLVAKRAMMLRDGGINLASGLLLAGLALDGA
                     FQRYDGLLLTACLISYIAWTYRAEHRVRRQNIHVKEARELETPVMPLWVAGLATGGGL
                     VALVWGADLLVEGAVGIARRAGVSEAVVGLSIVAVGTSLPELATSVVAAWRRHTDVAV
                     GNAVGSCLFNTFGIVGVSSALAPYAADPEVTRLDLPVMLAVSAGVMALLAWRQKLGRV
                     ESALFVALYAAYAVWLFGR"
     gene            complement(863..1288)
                     /locus_tag="VLL76_12120"
     CDS             complement(863..1288)
                     /locus_tag="VLL76_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HSV30299.1"
                     /translation="MTEVIFYEKPGCAGNARQKAVLMASGHRLEVRDLLSQPWTPETL
                     AGFFAGLAVPEWFNRSHPRIKSGEIVPEAFTAEEALALMCREPLLIRRPLMQAADRRV
                     AGFDDAQVDAWIGLKAGKAVGDACPSQAHDCQRPNSHTA"
     gene            complement(1366..>1504)
                     /locus_tag="VLL76_12125"
     CDS             complement(1366..>1504)
                     /locus_tag="VLL76_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HSV30300.1"
                     /translation="KDLLTRLEVQDIPPPYRLACQYIIRDETILVEFTGEPGVEIDLR
                     R"
BASE COUNT          190 a          486 c          559 g          269 t
ORIGIN      
        1 cgctggtgcg cggcgcggtg ggcgtggcgc gccgggccgg cgtgtccgaa ctggcgattg
       61 gcctgaccct ggtgggcgcc atgacctctg cgcccgaaat ggtggtgtcg gtccaggcgg
      121 cgctggccgg ccaggcaggc cttgctctgg gcaacgtcgt cggcagcaac accgccaacc
      181 tgctgctgat catgggtgcc ggcgggttgg tgcggccgtt ggtggcgaag cgcgccatga
      241 tgctgcgcga tggcggcatc aatctggcgt ccgggctgtt gctggcggga ctggcgctcg
      301 acggcgcctt ccagcgctac gacggcctgc tgctgaccgc gtgcctgatc tcctacatcg
      361 cctggaccta ccgcgccgaa caccgggtgc ggcgtcagaa catccatgtc aaggaagcgc
      421 gcgagttgga aacgccggtc atgccgctgt gggtggcggg ccttgccacc ggcggcggac
      481 tggtggcgct ggtgtggggc gccgatttgc tggtcgaggg cgcggtcggc atcgcgcggc
      541 gggccggcgt gtcggaagcc gtggtcggcc tgtctatcgt cgccgtcggc acctctttgc
      601 ccgagttggc gacatcggtg gtggcggcgt ggcggcgaca taccgacgtg gcagtcggca
      661 acgcggtcgg gtcctgcctg ttcaacacct tcggcatcgt cggcgtgtcg tcggcgctgg
      721 cgccctatgc ggccgatccc gaggttacca ggctcgacct gccggtcatg ctggcggtgt
      781 cggccggggt gatggcgttg ctggcgtggc ggcagaagct gggacgggtg gagtcggcgc
      841 tgttcgtggc gctgtacgcg gcctatgcgg tgtggctgtt cggccgctga cagtcatgcg
      901 cctggctggg gcaggcatcg cccaccgcct tgcccgcctt caggccgatc caggcatcga
      961 cctgggcgtc atcgaaaccg gccacgcggc ggtcggccgc ctgcatcagc gggcggcgga
     1021 tgagcaacgg ctcgcggcac atcagggcca gcgcctcctc ggcggtgaag gcctcgggca
     1081 cgatttcgcc ggatttgatc ctgggatgcg agcggttgaa ccactcgggc acggccaagc
     1141 ccgcgaagaa gccggccagg gtttcgggcg tccacggctg gctgagcagg tcgcgcacct
     1201 ccagccggtg gcccgacgcc atcagcaccg ccttttgccg cgcgttgccg gcgcagcccg
     1261 gcttttcata gaagatcacc tcggtcatcg gcctctccca agagttgggg ggcgccacgg
     1321 atggcgcccc ccttcatcga cctgcgttcc gcttccgcca cctgattaac gtcgcaggtc
     1381 gatctcgaca ccgggttcgc cggtgaattc caccaggatg gtctcgtccc ggatgatgta
     1441 ctggcaggcc aggcggtagg gcggggggat gtcctgcacc tccagcctgg tcagaaggtc
     1501 cttg
//
LOCUS       DATIKR010000770         1789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59322, whole genome shotgun sequence.
ACCESSION   DATIKR010000770 DATIKR010000000
VERSION     DATIKR010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59322"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..>1789
                     /locus_tag="VLL76_12130"
     CDS             60..>1789
                     /locus_tag="VLL76_12130"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV30301.1"
                     /translation="MLPELAPTLVLLGLAVLVLPSLPRDHGPARAIVLAIAMACMGRY
                     LLWRWTDTLPPPGLDGASLWMWLLAVMETLALGNAMLTALFLTRRSNRRADADAGEAR
                     LAARPNLPAVDVVIPTYNEPIEVVERSILGALALDWPDSRVWVLDDGRRPWLAEYCRA
                     KGVAWITRDGNAHGKAGNVNAWLTAGGGEAPFVMVLDADFVPQARFLRRVMGFFDDGS
                     VALVQTPQSFFNPDPIQMNLLCGTALADEQRFFYHSLQPSLDAWGAAFCCGTSFVVRR
                     DRLLAAGGVPTCTVTEDMMTTYALASAGGRTVYLDEPLSAGLAAEGLAEFVGQRARWC
                     LGTIQALRSPNGPLRARLGPAHLLCFLNAQLFWLGSVPLMLLAILAPAVFWWTGTPAF
                     LAPADAFLWHFGPRFVAEAVAIAWVSRWSVVPVLSGVAPLVVAPAALGSVLRALFATK
                     GLTFRVTLKGCQPGRVVVHGRMLAWLGAVAALIALGMAGAQVPELAPVAGRHAVNLAW
                     SGYALGLLFLAMLVCIEIPRKRRHDRIVFGEPAWLDGAPVRLVDLSLGGACVEGECGD
                     GTRLHLSGVG"
BASE COUNT          196 a          615 c          667 g          311 t
ORIGIN      
        1 gatgccggcg ctcaagccgc tggtggacgc cgtcgccgcc ggaatgtgga aaggccgcga
       61 tgcttcctga actggcgccc accctggtgc tgctggggct ggcggtgctg gtgctgccgt
      121 cgctgccgcg cgaccacggc ccagcccgcg cgatcgtgct ggccatcgcg atggcctgca
      181 tgggccgcta cctgctatgg cgctggaccg acaccttgcc gccgcccggc cttgacggcg
      241 ccagcctgtg gatgtggctg ctggcggtga tggagacgct ggccctgggc aacgccatgc
      301 tgacggcgct gttcctgacg cgacgctcca accgccgcgc cgatgccgat gccggcgagg
      361 cccggctggc ggcacggccg aacctgccgg cggtggacgt cgtcattccc acctacaacg
      421 aacccatcga ggtggtcgag cgctcgatcc tgggcgcgct ggcgctggac tggcccgatt
      481 cgcgggtgtg ggtgctggac gacggccggc ggccctggct ggcggagtat tgccgcgcca
      541 agggcgtggc ctggatcacc cgcgacggca acgcccacgg caaggccggc aacgtcaacg
      601 catggctgac ggccggcggc ggcgaggcgc ccttcgtcat ggtgctggat gccgatttcg
      661 tcccccaggc gcgcttcctg cgccgggtca tgggattttt cgacgatggc tcggtggccc
      721 tggtgcagac gccgcaaagc ttcttcaacc ccgaccccat ccagatgaac ctgctgtgcg
      781 gcaccgccct ggccgacgag cagcgctttt tctaccacag cctccagccg tccctggatg
      841 cctggggcgc ggcgttctgc tgcggcacct cgttcgtggt gcggcgcgac cggctactgg
      901 cggcgggagg cgtgccgacc tgcacggtga ccgaggacat gatgaccacc tatgccctgg
      961 cgtcagcggg cgggcgcacg gtctatctgg acgaaccgct gtcggccggc ctggccgccg
     1021 aaggcttggc ggaattcgtc ggccagcggg cgcgctggtg cctgggcacc atccaggcgc
     1081 tgcgctcgcc caacggcccg ttgcgggcgc ggctggggcc ggcgcatctg ctgtgcttcc
     1141 tcaatgcaca attgttctgg ctcggctctg tgccgctgat gctgctggcg attctggcgc
     1201 cggcggtgtt ctggtggacc ggcacgcccg ccttcctggc gccggccgac gccttcctgt
     1261 ggcatttcgg gccgcgcttc gtcgccgagg ccgttgcgat cgcctgggtg tcgcgttggt
     1321 cggtggtgcc ggtgctgtcg ggcgtggcgc cgctggtggt ggcgccggcc gccttgggct
     1381 cggtgctgcg ggcgctgttc gccaccaagg gcttgacctt ccgcgtgacc ctcaagggct
     1441 gccagcccgg ccgggtggtg gtgcatggcc gcatgctggc ctggctgggg gcggtggcgg
     1501 cgctgatcgc gctgggcatg gccggggcgc aagtgccgga actggctccg gtggccggcc
     1561 ggcacgccgt caacctggcc tggagcggct atgccctggg cttgctgttc ctcgccatgc
     1621 tggtctgcat cgagatcccg cgcaaacgcc ggcacgaccg catcgtcttc ggcgaaccgg
     1681 cgtggctcga cggcgccccg gtccggctgg tggatctgtc gctgggcggc gcctgcgtcg
     1741 agggcgaatg cggcgacggc acgcggcttc acctgtccgg cgtgggcga
//
LOCUS       DATIKR010000771         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_59372, whole genome shotgun sequence.
ACCESSION   DATIKR010000771 DATIKR010000000
VERSION     DATIKR010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59372"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VLL76_12135"
     CDS             complement(<1..376)
                     /locus_tag="VLL76_12135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30302.1"
                     /translation="MKRVLSILLVALLAFTVAADAYARAGKSGSMGSRGSRTYDRPME
                     RSVTPPPATAPQTQPGTAQPMYNPGAVQRPAMAPQAMQRPGFFQRNPMLGGLMAGMVG
                     AGLFGLLFNSSAFAAAGDAAPFA"
     gene            562..1683
                     /locus_tag="VLL76_12140"
     CDS             562..1683
                     /locus_tag="VLL76_12140"
                     /inference="COORDINATES: protein motif:HMM:NF015878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0090729 - toxin activity [Evidence IEA];
                     GO_process: GO:0001907 - killing by symbiont of host cells
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="insecticidal delta-endotoxin Cry8Ea1 family
                     protein"
                     /protein_id="HSV30303.1"
                     /translation="MENALRTAVLFGVGRIPTAGPFFSTMLGLLWPVASADPWPKIQQ
                     RVEELIDERLADDKKEDVKEKLAGIGELGKQLDLEAKSGAPDKVYVSYITLRDLIIAY
                     MPEFQTPRYRLLLLPYYAQLVNIQLALLGDAVRNADKWGLDAAEVGVAVTDLRALITD
                     ASAYVEKVLAEERVNLSLRAARTLRPLPFLSIAFERTMALTVTDFAFYWPYLDPTKYP
                     DATKVPRLEREIFSDPHGSPQTLDHFQLPHNDARPLSQVTIWSANYLDAVQIAHGDHV
                     SPRMGSQTTGKVAWSGDISPDNPIVGFEVRSGDVVDALRLKFQDGTYTPWCGGGGGSL
                     HAMEIDGHVLSSIHVAGASQFYSSADCVVFGFRLKDSYR"
     gene            complement(1700..>1823)
                     /gene="prfB"
                     /locus_tag="VLL76_12145"
     CDS             complement(1700..>1823)
                     /gene="prfB"
                     /locus_tag="VLL76_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385191.1"
                     /note="recognizes the termination signals UGA and UAA
                     during protein translation a specificity which is
                     dependent on amino acid residues residing in loops of the
                     L-shaped tRNA-like molecule of RF2; in some organisms
                     control of PrfB protein levels is maintained through a +1
                     ribosomal frameshifting mechanism; this protein is similar
                     to release factor 1; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HSV30304.1"
                     /translation="KDLRTNVETSDTQGVLDGDLDQFMAASLASRIKGAEEAGA"
BASE COUNT          303 a          595 c          622 g          303 t
ORIGIN      
        1 tggcgaacgg cgcggcgtcg ccggcggcgg cgaaggccga cgaattgaac agcaggccga
       61 acaggccggc gcccaccatg ccggccatca ggccgcccag catggggttg cgctggaaga
      121 agccggggcg ctgcatggcc tgcggcgcca tggcggggcg ctgcacggcg cccggattgt
      181 acatgggctg ggcggtgccc ggctgggtct gcggcgccgt ggccggcggc ggcgtgacgc
      241 tgcgctccat cgggcggtca taggtgcgcg acccgcgcga ccccatggac ccgctcttgc
      301 cggcccgggc ataggcgtcg gcggcgacgg tgaaggccag cagggccaca agcaggatgg
      361 agaggacgcg cttcatcgag ttcccgttcg gtgatgtttc ggtcccgacc gaaataggtc
      421 ggtcgccgcg gatttcaaac gcgatttggc acggcgtata cccgatagtc acgaacaacc
      481 gccggaggta tcgtccccac cctcgctctg ttcgggtagc gagtattcac attgttttgg
      541 gggactatga tggattacca gatggaaaat gcccttcgaa cggcggtgct gttcggcgtg
      601 ggccgcatcc cgaccgccgg gccgttcttc tcgaccatgc tcggcctgct gtggcccgtc
      661 gccagcgccg acccgtggcc caagatccag cagagggtcg aggaactgat cgacgaacgg
      721 ctggccgacg acaagaagga ggacgtcaag gagaagctgg ccggcatcgg cgagttgggc
      781 aagcaactgg acctcgaggc gaagtcggga gcgccggaca aggtctatgt cagctacatc
      841 accctgcgcg acctgatcat cgcgtacatg ccggaattcc agacgccgcg ataccgtctg
      901 ctgctgcttc cctattacgc ccagttggtc aacatccagc tggcgctgct gggcgacgcg
      961 gtgcgcaacg ccgacaagtg gggcctggac gccgccgagg tgggtgtcgc ggtgaccgac
     1021 ctgcgcgcct tgatcaccga tgcctccgcc tatgtggaga aggtcctggc cgaggagcgc
     1081 gtgaacctgt ccctgcgcgc cgccaggacg ctgcggccgc tgcctttcct gtcgatcgcg
     1141 ttcgagcgca cgatggcgct gacggtcacc gacttcgcct tctactggcc gtacctggat
     1201 cccaccaaat atcccgacgc caccaaggta cccaggctgg agcgcgagat cttctcggac
     1261 ccgcacggct cgccccagac cctcgatcac ttccagctac cgcataacga tgcgcggccg
     1321 ctcagtcagg tgaccatctg gagcgccaac tacctcgacg ccgtccagat cgcccatggc
     1381 gaccacgtca gcccgcgcat gggatcgcag accaccggca aggtggcatg gagcggcgat
     1441 atctcgccgg acaatccgat cgtcggtttc gaggtgagaa gcggtgacgt ggtcgatgcg
     1501 ctgcgcctga aattccagga cggcacgtac accccgtggt gcggcggggg cggcgggtcg
     1561 ctgcacgcca tggagatcga cggccacgtc ttgtcgtcga tccatgtggc cggcgccagc
     1621 cagttctaca gcagcgccga ttgcgtggtg ttcggcttcc gcctcaagga cagctaccgg
     1681 tgacgggacg gcgggggcct caggcccccg cttcctcggc tcccttgatg cggctggcca
     1741 gcgaggcggc catgaactgg tcgaggtcgc cgtctagcac gccctgggtg tccgaggtct
     1801 cgacgttggt gcgcaggtcc ttg
//
LOCUS       DATIKR010000772         2707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_157030, whole genome shotgun sequence.
ACCESSION   DATIKR010000772 DATIKR010000000
VERSION     DATIKR010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157030"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VLL76_12150"
     CDS             complement(<1..298)
                     /locus_tag="VLL76_12150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HSV30305.1"
                     /translation="MTTAILCDHCLLPLGRSAIGREIDGEHHGFCCYGCYLVYRMHHG
                     RPEEADATWLLIRLGIGAFLAMNLMLFTLLDYSRVLERTAPELRPAVHVLLWALA"
     gene            complement(295..993)
                     /locus_tag="VLL76_12155"
     CDS             complement(295..993)
                     /locus_tag="VLL76_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014331374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV30306.1"
                     /translation="MAEVTAELVMVFLAGLAGSFHCVGMCGGFTCALAVAAPARATMI
                     ARHLAYNGGRVITYAFLGALAGAFGRVVCTADGVTAVLPAEQLQRLLAVAAGGLMVVM
                     AAGLLGMRRRWGPKGFDLGPVAAMLRPLLVAPGPTGSLALGVVNGFLPCPLVYALVAK
                     AASGADAATGAMTMLAFGLGTVPALAVIGGLGRYAGPAALRRGVAVAGWFVLALGIVT
                     IGRGVLPILHGHAA"
     gene            complement(1214..1408)
                     /locus_tag="VLL76_12160"
     CDS             complement(1214..1408)
                     /locus_tag="VLL76_12160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014331376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30307.1"
                     /translation="MTPPKDEPTRPENEIERYGIEPIEVRHGRIDAWLLVVYLVLFIW
                     ALYYGFTYWGGLGPGLNLGL"
     gene            complement(1389..1553)
                     /gene="ccoS"
                     /locus_tag="VLL76_12165"
     CDS             complement(1389..1553)
                     /gene="ccoS"
                     /locus_tag="VLL76_12165"
                     /inference="COORDINATES: protein motif:HMM:NF015554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HSV30308.1"
                     /translation="MAQLTFIQFLVALFMGLGALCVFIWAVLSGLFVDVEQIAYRAYR
                     AEVDNDAPQR"
     gene            complement(1559..>2707)
                     /locus_tag="VLL76_12170"
     CDS             complement(1559..>2707)
                     /locus_tag="VLL76_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013845680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV30309.1"
                     /translation="NFDTPQAKLQLTPNAEGLLFVPERGGYPIIHTPNDEFTGERVHL
                     AASTPELDALIAYLQKIGTNRGKWRDVFEPQRVEMTEVTLPRSDEWIAHGKAVYERRC
                     IGCHGKDGDGNGPAATFMHRDRPRNFTLGLFKFQLTPSGSLPSDGDLLRTITRGVRGT
                     AMPSWHELREKDRLAVVQYIKYHLAADRSDPKAPYLYFVEERPKPPLFISDVPPPSAQ
                     LIKRGAEVWQQAKCWECHGREGRGDGEKAAGLKDDTKFSVPPANLTLGQFKSGPAVTD
                     IFRTMSNGLPGTPMPSYSKSLPEEDRWALSYFVLSLSAFRDPISGAALPISPADRMAI
                     SDPALPAATSQQAYAPTGPAAPQAAYAGAAWATRHGVELVNDPPGPEE"
BASE COUNT          539 a          873 c          867 g          428 t
ORIGIN      
        1 tggcgagcgc ccatagcagc acatggacgg ctgggcgcaa ttcgggcgcg gtccgttcga
       61 ggacccgcga ataatcgagc agggtaaaca gcatcaggtt catggcgagg aaggcgccga
      121 ttccgagccg gatcagcaac caggtcgcat cggcctcctc ggggcggccg tggtgcatgc
      181 gatagacgag atagcagccg taacaacaga agccgtgatg ctcaccgtcg atctctcgcc
      241 ctatcgccga acggccgagt ggaagcaggc aatgatcgca aaggatagcc gttgtcatgc
      301 ggcatgcccg tgcagtatcg gcagcacgcc ccggccaatg gtgacgattc ccagagccag
      361 gacgaaccaa cctgccaccg ccactccacg ccgaagtgcc gccggcccgg catagcggcc
      421 caatccgccg atgaccgcaa gcgccggtac ggtgccgaga ccgaaggcaa gcatggtcat
      481 cgcgccggtt gccgcgtcgg cccccgaggc ggctttggcg acgagagcgt agaccagcgg
      541 acagggaaga aagccgttga ccacgcccag cgcaagcgat ccggtcggcc ccggcgccac
      601 cagaagcggc cgcagcatcg ccgccaccgg accgagatca aaacccttcg gtccccagcg
      661 gcgccgcatt cccagcaggc cagccgccat caccaccatc agcccgccag cggccacggc
      721 cagcaatcgt tggagctgct ctgccggcag cacggcggtc accccgtcgg cggtgcacac
      781 tacccgaccg aacgctcccg ccagggcgcc gagaaaggca taggtgatca cccggccgcc
      841 attgtaggcg agatggcgag caatcatcgt cgcccttgcc ggcgccgcaa cggccagggc
      901 gcaggtgaaa ccgccacaca tgccgacgca atgaaagctg ccggccagtc cggcgagaaa
      961 aaccatgaca agctcggccg tcacttccgc catgccaaca gcgccaccca gacaaaaaat
     1021 ccgacggtgg ctacgacgaa aatcgcgaaa ccgatggtct gctcgacgct catgccctca
     1081 ggcagcatgg tgaaaactcc gctacaaccc ggccccgatc acgttcaggg ccagttcgaa
     1141 caccaagaag gcgatgatta acgttgcgaa gacgaacatg agtttggctg ctaccacggt
     1201 ggcgcctcct tcgtcacagc ccgaggttga gcccaggtcc gaggccgccc caatatgtga
     1261 agccgtaata cagcgcccat atgaacagga cgagatagac gaccagcagc caggcatcga
     1321 tgcgcccatg gcgcacctcg atcggttcga ttccgtatcg ctcgatttca ttctccggcc
     1381 gtgttggctc atctttgggg ggcgtcattg tcgacctccg cgcgataggc ccgataggcg
     1441 atctgctcca cgtccacgaa caagccggac aacacggccc aaatgaagac gcacaaggct
     1501 cccaacccca tgaagagcgc gacaaggaat tgaatgaagg tcagttgtgc catggtcatt
     1561 actcctccgg gccgggcgga tcgttgacca gctcgacgcc atgacgcgtg gcccaggccg
     1621 cgccggcata ggccgcctgg ggagcggcag ggccagtcgg cgcataggct tgttgcgatg
     1681 tggccgccgg caaagcggga tcgctgatcg ccatccggtc ggcgggcgaa atcggcagcg
     1741 ccgcacccga gatcgggtca cggaaggcgc tgagcgacaa cacgaagtag gacagcgccc
     1801 aacggtcctc ctcgggcagc gacttgctgt aggacggcat gggggtaccg ggaaggccgt
     1861 tgctcatggt gcggaagatg tcggtgacgg ccgggccgga cttgaactgc ccgagcgtca
     1921 gattggcggg tgggaccgag aatttggtat cgtcttttag gccggcggcc ttttcgccgt
     1981 ctccccgacc ctcgcggccg tgacattccc aacacttggc ctgttgccac acctcggcgc
     2041 cgcgcttgat caactgggcc gatggcggcg gcacatcgct aatgaagagt ggcggctttg
     2101 gccgctcctc gacgaagtac aggtagggcg ccttgggatc ggaacggtcg gcggccaagt
     2161 ggtacttgat gtactggact accgccaagc ggtccttctc gcgcaattcg tgccaggacg
     2221 gcatggcggt tcctcgcact ccgcgcgtta tggtccgcaa caggtcaccg tcgcttggca
     2281 gggatccgct gggggtcagc tgaaatttga acagcccgag ggtgaagttg cgcgggcggt
     2341 cgcgatgcat gaaggtggcg gccggaccgt tgccgtcgcc gtctttcccg tggcagccga
     2401 tacaacgacg ctcgtagacg gccttgccgt gcgcgatcca ctcgtcggag cgcggcagcg
     2461 tcacctcggt catttccacc cgctgcggct cgaagacgtc gcgccacttg ccgcgattgg
     2521 tgccgatctt ttgcagatag gcgatcagcg cgtccaattc aggggtgctg gcggcaaggt
     2581 ggacgcgctc gcccgtgaac tcgtcgttgg gggtgtggat gatcggatag cccccgcgct
     2641 cgggcacgaa cagcaggccc tctgcgttgg gcgtcaattg cagcttggct tgcggagtgt
     2701 cgaaatt
//
LOCUS       DATIKR010000773         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_205028, whole genome shotgun sequence.
ACCESSION   DATIKR010000773 DATIKR010000000
VERSION     DATIKR010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205028"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VLL76_12175"
     CDS             <1..429
                     /locus_tag="VLL76_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV30310.1"
                     /translation="EAVVHDVAVAGRIAGATASSKLIPDHAIPLVQLGVSPRIDAIDQ
                     GIHALFQVAPEHARALKVGLPVDVFLATGATTLRTAVPRDAVVQSGGRQVVFVRKAPE
                     VFEARPVVVHQVVGPLAEVFGVQPGDRVVVQGVEQLKAAR"
     gene            432..>2318
                     /locus_tag="VLL76_12180"
     CDS             432..>2318
                     /locus_tag="VLL76_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV30311.1"
                     /translation="MFDRIIELSLRHRLFVLAFAAVLLAYGGLALSRLPVDVFPDLNR
                     PTVTIMTEAAGLAPEEVEALVTRPVETAMNGAPGVVRVRSTSGVGLSIVFVEFDWGTE
                     IYRNRQLVAERLATTAGQLPDGVQPVMGPVTSIMGEIMLVGMRSETGDTSPMEIRTLA
                     DWVVRQRLLSIPGIAQVIPIGGQVRQYQVLVSPTRLSAMGLSYQDIETALAGFARNTT
                     GGFLEQRQSEYLIRNLGQTTDPEDLRNTVVAWKNGAAITVGQVAEVEIGAGVKRGDAS
                     VNGKPAVILAVQKQPGANTVTLTRSVEQALAELGRSLPPDVKADHILFKQADFIERAV
                     DNVEEALRDGAILVAIVLFAFLMNMRTTFISLTAIPLSIVVTAVVFQWLGMSINTMTL
                     GGLAVAIGELVDDAVVDVENILRRLRENARLAHPRPVFTVIRDASSEVRNSIVYATVI
                     VVLVFLPLFALSGIEGRLFTPLGIAYVVSILASLLVSLTVTPVLAYFLLPKAKVVAHG
                     DSWLVRRLKAWDARALAWSFANPRAVIVPAVALVAVAAASVPFLGRAFLPAFNEGTVT
                     VTVMLAPGTSLSESNRIGTIAEKLILEVPEVASTGRRTGRAELDEHAEGVHYSEIDVD
                     LKASG"
BASE COUNT          324 a          781 c          820 g          393 t
ORIGIN      
        1 gaggcggtgg tgcacgatgt cgccgtcgcc ggccgcatcg ccggcgccac ggccagttcc
       61 aagctgatcc ccgaccatgc catcccgctg gtccaactgg gcgtcagccc gcgcatcgac
      121 gcgatcgacc agggcatcca tgccctgttc caggtggcgc ccgagcatgc ccgcgcgctc
      181 aaggtcggcc tgccggtgga cgtcttcctg gccaccggcg ccaccaccct gcgcacggcg
      241 gtgccgcgcg atgccgtcgt gcaatcgggc ggccgccagg tggtgttcgt gcgcaaggcc
      301 ccggaggtgt tcgaggcccg gccggtggtg gtgcaccagg tggtcgggcc gctggccgag
      361 gtgttcgggg tgcagcccgg cgaccgcgtg gtggtgcagg gcgtcgagca attgaaggcg
      421 gcgaggtagc catgttcgac cgcatcatcg aactgagcct caggcaccgc ctgttcgtgc
      481 tggccttcgc cgccgtgctg ctggcctatg gcgggctggc gctgtcgcgg ttgccggtgg
      541 acgtgttccc cgacctcaac cgccccaccg tcacaatcat gaccgaggcc gccggcctgg
      601 cgcccgaaga ggtcgaggcg ctggtcaccc ggccggtcga gaccgccatg aacggcgccc
      661 ccggcgtggt gcgcgtgcgc tcgacctcgg gcgtcggcct gtccatcgtg ttcgtggaat
      721 tcgactgggg caccgagatc taccgcaacc ggcaactggt ggcggaacgg ctggcgacca
      781 ccgccggcca actgcccgac ggcgtgcagc cggtgatggg gccggtgacc tcgatcatgg
      841 gcgaaatcat gctggtgggc atgcgctccg agacgggcga caccagcccc atggagatcc
      901 gcaccctggc ggattgggtg gtgcgccagc gcctgctgtc catccccggc atcgcccagg
      961 ttatccccat cggcggccag gtgcgccagt accaggtgct ggtgtcgccg acgcggctgt
     1021 cggccatggg gctgtcctat caggacatcg agacggcgct ggccggcttc gcccgtaaca
     1081 ccaccggcgg atttcttgag caacgccagt cggaatattt gatccgcaac ctgggccaga
     1141 ccaccgaccc cgaggatctg cgcaacaccg tggtggcgtg gaagaacggt gccgccatca
     1201 cggtggggca ggtggccgag gtcgagatcg gcgccggggt gaagcgcggc gacgcctcgg
     1261 tcaacggcaa gccggcggtg atcctggcgg tgcagaagca gcccggcgcc aacaccgtaa
     1321 ccctgacccg gtcggtcgag caggcgctgg ccgagttggg gcgctcgctg ccgcccgacg
     1381 tcaaggccga ccatatcctg ttcaagcagg ccgatttcat cgagcgcgcc gtggacaacg
     1441 tggaagaggc gttgcgcgac ggtgccatcc tggtcgccat cgtgctgttc gccttcctga
     1501 tgaacatgcg caccaccttc atcagcctga ccgccatccc gctgtccatc gtggtgacgg
     1561 cggtggtgtt ccagtggctg ggcatgtcca tcaacaccat gaccctgggc ggcctggcgg
     1621 tcgccatcgg cgaactggtg gacgacgcgg tggtggatgt cgaaaacatc ctgcggcggc
     1681 tgcgcgagaa tgccaggctg gcgcatcccc gcccggtgtt cacggtgatt cgcgacgcct
     1741 ccagcgaggt gcgcaactcc atcgtctacg ccaccgtgat cgttgtgctg gtgttcctgc
     1801 cgctgttcgc gctgtcgggc atcgagggcc ggctgttcac gccgctgggc atcgcctatg
     1861 tggtgtcgat cctggcgtcg ctcttggtgt cgctgacggt gacgccggtg ctggcctatt
     1921 tcctgctgcc caaggccaag gtcgtcgccc atggcgattc ctggctggtg cggcggctca
     1981 aggcatggga tgcccgcgcc ctggcctggt cgttcgccaa cccgcgcgcg gtgatcgtgc
     2041 cggcggtggc gctggtggcg gtggcggcgg cgtcggtgcc gttcctcggc cgcgccttcc
     2101 tgcccgcctt caacgagggc acggtgacgg tgacggtgat gctggcgccc ggcacgtcac
     2161 tgtcggaatc caaccgcatc ggcaccatcg ccgagaagct gatcctggag gtgcccgagg
     2221 tggcctcgac cgggcggcgc accggccgcg ccgagttgga tgagcatgcc gagggcgtcc
     2281 attattccga gatcgacgtg gacctcaagg cctcgggc
//
LOCUS       DATIKR010000774         2485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_217514, whole genome shotgun sequence.
ACCESSION   DATIKR010000774 DATIKR010000000
VERSION     DATIKR010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217514"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..952
                     /gene="dnaB"
                     /locus_tag="VLL76_12185"
     CDS             <1..952
                     /gene="dnaB"
                     /locus_tag="VLL76_12185"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HSV30312.1"
                     /translation="AYQRDGGLAGISTGLIDMDKKLGGLHPSDLLILAGRPSMGKTSL
                     ATNIAFNAAKAYKEEVDALGNKKAVDGAKVAFFSLEMSSEQLAARILAEQAEISSHKI
                     RQGEMTNEEFERLVLAAQELHRLPLYIDDTPALSISAVRTRARRLKRQHGLGLIVVDY
                     LQLLRGSGATSESRVQEVSEITRGLKALAKELDLPVIALSQLSRAVEQREDKRPQLSD
                     LRESGSIEQDADVVMFVYREQYYLERAEPGRRPEESEEKFNERYDSWHKRLMEVVNTA
                     EVIIAKQRHGPVGTVRLSFQGEFTKFGNLAASDHFEEPGF"
     gene            1062..1355
                     /locus_tag="VLL76_12190"
     CDS             1062..1355
                     /locus_tag="VLL76_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005373830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HSV30313.1"
                     /translation="MDKRPCVYILASARNGTLYIGVTSDVLKRVWEHKNDVADGFTKR
                     YHVHDLVYAEFHDTMDAAILREKQVKRWARAWKIELIEKTNPSWHDLYDEFAK"
     gene            1458..>2485
                     /gene="alr"
                     /locus_tag="VLL76_12195"
     CDS             1458..>2485
                     /gene="alr"
                     /locus_tag="VLL76_12195"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSV30314.1"
                     /translation="MSLMSRATAILTIDLAAIVENWRRIKARVGAAEVAGVVKADAYG
                     LGAARVAPALAAAGCRTFFIATIDEGIALRALCPDARILALCGAMPGTEADLAEHRLV
                     PVLNSLEQVADWSACAKARGGLEAALHVDTGMSRLGLDAPAVAALSARPDLLDGIRTI
                     LVMSHMACADEADHPKNVEQLDAFRRLQAVLPAAPRSLGASSTIFLGPDYHFDLVRPG
                     ACLYGINPIPGQPNPMRPVVGLRAKILQVRDVDTPMTVGYGATHRVTAKGRLAIVAAG
                     YADGLFRSLGNRGFGVIGGVRVPVVGRISMDLTAFDVSAAPADAVRPGAFIDIIGPGH
                     DTDDLATEA"
BASE COUNT          425 a          837 c          811 g          412 t
ORIGIN      
        1 ggcctatcag cgcgacggcg ggctggcggg catttccacc gggctgatcg acatggacaa
       61 gaagctgggc gggctgcacc cttccgacct cttgatcctt gccgggcgcc cgtcgatggg
      121 caagacctcg ctggccacca acatcgcctt caacgccgcc aaggcctaca aggaagaggt
      181 ggacgcgctg ggcaacaaga aggcggtgga cggcgccaag gtcgcgttct tctcgttgga
      241 aatgtcgtcc gaacagcttg ccgcccgtat cctggcggaa caggccgaga tctcgtcgca
      301 caagatccgc cagggcgaga tgaccaacga agagttcgag cggctggtcc tggccgccca
      361 ggagctgcac cggctgccgc tctatatcga cgacaccccg gcgctgtcga tttccgccgt
      421 gcgcacccgc gcccgccgcc tcaagcgcca gcatggcctg gggctgatcg tggtcgacta
      481 cctgcaattg ctgcgcgggt ccggcgcgac cagcgaaagc cgcgtccagg aagtgtcgga
      541 aatcacccgc ggactcaagg cgctggccaa ggaactggac ctgccggtga tcgccctgtc
      601 gcagttgtcg cgtgccgtcg aacagcgcga ggacaagcgt ccgcaattgt cggacctgcg
      661 cgaatcgggt tcgatcgaac aggacgccga cgtggtcatg ttcgtgtacc gcgaacaata
      721 ctacctggaa cgcgccgaac cgggccgccg gcccgaggaa tcggaagaga agttcaacga
      781 acgctacgat tcgtggcaca agcgcctgat ggaagtggtc aacaccgccg aggtcatcat
      841 cgccaagcag cgtcacggcc cggtcggcac cgtgcggctg tcgttccagg gcgagttcac
      901 caagttcggc aacctggccg ccagcgacca tttcgaggaa ccggggttct gatttattgg
      961 tagaccgtca cccccgcgaa ggcgggggtc catggcgccg tttgttccgt aatgggcatt
     1021 ctggattccc gccttcgcgg gaatgacgat tggagcggat catggacaag cgcccctgcg
     1081 tctacatcct cgccagcgcc cgcaatggca ctctgtacat cggcgtcacc agcgacgtgc
     1141 tgaagcgggt ttgggagcac aagaacgatg tggcggacgg cttcaccaag cgctatcacg
     1201 tccacgactt ggtctatgcg gaattccacg acaccatgga cgccgccatc ctgcgggaga
     1261 agcaggtgaa gcgctgggct cgtgcttgga aaatcgaact gatcgagaaa acgaacccct
     1321 cttggcatga cctttacgat gagtttgcca aataggccgt catcccgggc gaagcgtagc
     1381 gcagacccgg gatccatctc ggtgcaccac catggacccc ggctcgcgct gcgcttggcc
     1441 ggggtgacgg agaaatcatg tcgctaatgt cccgcgccac cgccatcctc accatcgacc
     1501 tcgccgccat cgtcgagaac tggcggcgca tcaaggcgcg cgtcggtgca gccgaggtgg
     1561 ccggggtggt caaggccgac gcctatggcc tgggcgcggc gcgggtggcg ccggccctgg
     1621 ccgccgccgg gtgccgcacc ttcttcatcg ccaccatcga cgagggcatc gccctgcgcg
     1681 cgctgtgccc cgatgcgcgc atcctggcgc tgtgcggcgc gatgccggga accgaagccg
     1741 atctcgccga gcatcgtctc gtcccggtgc tcaacagcct ggagcaggtc gccgactggt
     1801 ccgcctgcgc caaggcccgg ggcgggctgg aggcggcgct gcacgtggac accggcatgt
     1861 cgcgcctggg tctcgacgcc cccgccgttg ccgccttgtc cgcgcggccc gacctgctgg
     1921 acggcatccg caccatcctg gtgatgagcc acatggcctg cgccgacgag gccgaccacc
     1981 ccaagaacgt cgaacagctc gacgcattcc gtcggttgca ggcggtcctg ccggcggcgc
     2041 cgcgcagcct gggtgcctcg tccaccatct tcctggggcc ggattaccac ttcgacctgg
     2101 tgcggccggg cgcctgcctg tatggcatca accccattcc gggacagccc aaccccatgc
     2161 ggccggtggt cggcctgagg gcgaaaatcc ttcaggtgcg tgacgttgac acccctatga
     2221 ccgttggcta tggtgccacc caccgcgtta cggccaaagg gcgtctcgcc atcgtcgcgg
     2281 cggggtatgc cgacggtttg ttccggtctt tgggcaatcg cggcttcggt gtcatcgggg
     2341 gggtacgggt gccggtcgtg ggccgcattt ccatggattt gaccgccttc gacgtcagcg
     2401 ccgcgccggc cgacgccgtg cgcccgggcg cgttcatcga catcatcggc cccggccacg
     2461 acacggacga cctggcgacc gaggc
//
LOCUS       DATIKR010000775         3071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_157136, whole genome shotgun sequence.
ACCESSION   DATIKR010000775 DATIKR010000000
VERSION     DATIKR010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157136"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VLL76_12200"
     CDS             complement(<1..371)
                     /locus_tag="VLL76_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSV30315.1"
                     /translation="MRGRPNVVEVTVRIPADKIDAVRSYASRIARQRPPALRDEVIAK
                     LHQHRDIFERFGVKSASLFGSVVRDEAKPLSDVDLMVEFHPGQPGGLFRYVELKHALE
                     GLLGRPVDLITKGNIKPRLKAR"
     gene            494..1390
                     /locus_tag="VLL76_12205"
     CDS             494..1390
                     /locus_tag="VLL76_12205"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HSV30316.1"
                     /translation="MSVASMTGYARAEGRDAQVAWVWEAKSVNGRGLELRCRLPGGHD
                     ALEPVAREMAARKLKRGNVQLSLNVTRVTEAAPVRVNTDLLNQLLRLVSELAPAHPGI
                     AQARWDGLLSVKGVLEPMEAEEADAESVRKGREDAMKASLERALDALAAMRQVEGGRL
                     KVVLMAQLDDIARLSQRAGECAVLRPEAVKERLRAQVAAVLEAAPTLAEERVAQEVAL
                     IAVKADVREELDRLKAHVAAARELIEAGGAIGRKLDFLSQEFNREANTLCSKSSDVEL
                     TRVGLDLKAVIDQFREQVQNIE"
     gene            1407..2057
                     /gene="gmk"
                     /locus_tag="VLL76_12210"
     CDS             1407..2057
                     /gene="gmk"
                     /locus_tag="VLL76_12210"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HSV30317.1"
                     /translation="MSLPPANLPTVARRGLMLVLSSPSGAGKSTIARALLERDPHIAM
                     SVSATTRPPRPGEVDGKDYHFVTVEKFKDMVAAGQFLEHAKVFDNYYGTPKGPVEDAL
                     ASGRDVLFDIDWQGTQQLGQSARADLVTVFILPPSVDELERRLRSRAQDTDEVVKKRM
                     AKAGDEMSHWFEYDYILLNTDVERSIANVQAVLAAERLKRDRQVGMAAFVNGLRGE"
     gene            2081..2605
                     /locus_tag="VLL76_12215"
     CDS             2081..2605
                     /locus_tag="VLL76_12215"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HSV30318.1"
                     /translation="MDIKDHIRGIPDFPKPGILFYDISTLLAHADAWQVAMGRLARMV
                     RDFQPDVLAGIESRGFLVAAPLALKLGCGFVMLRKKGKLPGKTIKHEYALEYGTDTIE
                     VQEDAVPKGARVVIVDDLLATGGTMLAGVELLRKIGAEVSGSASIIELNFLPGRKRLE
                     DAKVPFASLVSYDE"
     gene            2651..>3071
                     /locus_tag="VLL76_12220"
     CDS             2651..>3071
                     /locus_tag="VLL76_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30319.1"
                     /translation="MDFALQAALLGAVMGSAILAVSTIYGWTLPAAPVAYGWWAAAFV
                     LETASKGVLLGGATPLLIELSDVFHGLAAGLVLVGARVLAGHRLTSNFLGAGLVASFG
                     WYFLAEELRNRLGLVELPLFGIGGLPLLYAGWTFFRLS"
BASE COUNT          490 a         1017 c         1085 g          479 t
ORIGIN      
        1 cgcgccttca gtcggggttt gatgttgccc ttggtgatca aatccaccgg ccggcccagc
       61 aggccctcaa gggcgtgctt cagctcgaca tagcggaaca ggccgcccgg ctggccgggg
      121 tggaattcga ccatcaaatc cacgtccgac agcggcttgg cctcgtcgcg caccaccgag
      181 ccgaacagcg aggccgactt gaccccgaag cgctcgaaga tgtcgcggtg ctggtgcagc
      241 ttcgcgatga cctcgtcgcg cagggccggc ggccgctggc gggcgatgcg gctggcatag
      301 gaccgcaccg cgtcgatttt gtcggcgggg atccggacgg tgacttcgac cacgttggga
      361 cggccgcgca acggcctgcg tctttccttc atacctccaa ggatagccgc gtcgggcggc
      421 cataggaagg acggttgttg ccgtcggcgg ggacggttat aaccacagcg aaggcattca
      481 aggaggtccg cccgtgtccg tcgccagcat gaccggctac gcccgcgccg aggggcgcga
      541 cgcccaggtg gcctgggtgt gggaagcgaa aagcgtcaac ggccgcggcc tcgaactgcg
      601 ctgccgcctg ccgggcggcc acgacgcgct ggagccggtg gcgcgcgaga tggcggcccg
      661 caagctcaag cgcggcaacg tgcaactgtc gctcaacgtc acccgcgtca ccgaggcggc
      721 gccggtgcgg gtcaacaccg acctgctgaa ccagttgctg cggctggtga gcgaactggc
      781 gccggcccat cccggcatcg cgcaggcgcg ctgggacggc ctgttgtcgg tcaagggcgt
      841 gctggaacct atggaggccg aggaggccga cgccgaatcc gtgcgcaagg gccgcgagga
      901 tgccatgaag gcgtcgctgg agcgggcgct cgatgccctg gccgccatgc gtcaggtcga
      961 gggcggccgc ctgaaggtgg tgctgatggc gcaactggac gacatcgcgc ggctgtcgca
     1021 gcgggccggc gaatgcgccg tgctgcggcc ggaggcagtc aaggagcgcc tgcgcgccca
     1081 ggtcgccgcc gtgctggaag cggcgcctac cctggccgaa gagcgggtcg cccaggaagt
     1141 ggcgctgatc gccgtcaagg ccgacgtgcg cgaggaactg gaccgcctca aggcccatgt
     1201 cgccgccgcg cgcgaactga tcgaggccgg cggcgcaatt ggccgcaagc tggacttcct
     1261 gtcgcaggag ttcaaccgcg aggccaacac cttgtgctcg aagtcgtccg acgtggagct
     1321 gacccgcgtc ggcttggacc tcaaggcagt gatcgaccag ttccgcgagc aggtccagaa
     1381 tatcgaatag gaaccagggg gaagaaatga gcctgccgcc cgccaacctg cccaccgtcg
     1441 cccggcgggg cctgatgctg gtgctatcgt cgccctcggg agccggcaag agcaccatcg
     1501 cccgcgcgct gctcgagcgc gacccgcaca tcgccatgtc ggtgtcggcc accacccggc
     1561 cgccgcgccc cggcgaggtg gacggcaagg attatcactt cgtcacggtc gagaagttca
     1621 aggacatggt cgccgccggc cagttcctgg aacacgccaa ggtgttcgac aattactacg
     1681 gcacccccaa ggggccggtc gaggatgcgc tggcctcggg ccgcgacgtg ctgttcgaca
     1741 tcgactggca gggcacccag caattgggcc agagcgcgcg cgccgatctg gtcacggtgt
     1801 tcatcctgcc gccctcggtc gacgagttgg agcgccggct gcgcagccgt gcccaggaca
     1861 ccgacgaggt ggtcaagaag cgcatggcca aggccggcga cgagatgagc cactggttcg
     1921 aatacgacta catcctgctc aacaccgatg tcgaacgctc gatcgccaac gtccaggcgg
     1981 tgctggcggc cgagcggctg aagcgcgacc gccaggtcgg catggccgcg ttcgtcaacg
     2041 ggttgcgcgg cgagtaaccg cagaaaaggg ggctgtttcc atggacatca aggaccacat
     2101 ccgcggcatt cccgactttc ccaagccggg catcctgttc tacgacatct cgacgctgct
     2161 ggcccatgcc gacgcctggc aggtcgccat gggccgcttg gcccgcatgg tgcgcgactt
     2221 ccagcccgac gtgctggccg gcatcgaatc gcgcggcttc ctggtggcgg cgccgctggc
     2281 gctgaagctg ggctgcggct tcgtgatgct gcgcaagaag ggcaagctgc cgggcaagac
     2341 catcaagcac gaatacgcgt tggaatacgg caccgacacc atcgaggtgc aggaagacgc
     2401 ggtgcccaag ggcgcccgcg tggtgatcgt cgatgacctg ctggcgaccg gcggcaccat
     2461 gctggccggc gtcgagctgc tgcgcaagat cggcgccgag gtcagcggtt cggcttcgat
     2521 catcgagctg aacttcctgc ccggccgcaa gcgcctggag gacgccaagg ttcccttcgc
     2581 cagcctggtt tcctacgacg agtgaccgcg tcctccgcgc ccggcgcgga ggacggaaag
     2641 aggggcggcg atggatttcg cgctgcaggc ggcgctgctg ggagcggtga tgggctcggc
     2701 gatcctcgcc gtgtccacca tctacggctg gacgctgccg gcggctcccg tcgcctacgg
     2761 ctggtgggcc gccgccttcg tgctggaaac cgccagcaag ggcgtgctgc tgggcggcgc
     2821 caccccgctg ctgatcgaat tgtccgacgt gttccatggc ctcgccgccg gcctggtgct
     2881 ggtcggcgca cgggtgctgg cggggcaccg gttgacctcg aacttcctcg gcgcaggcct
     2941 ggtcgccagc ttcggctggt acttcctggc cgaggaattg cgcaaccggc tgggtttggt
     3001 cgagttgccg ctgttcggca tcggcggctt gccgctgctt tatgccggct ggaccttctt
     3061 ccgcctgtcg c
//
LOCUS       DATIKR010000776         1768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_181389, whole genome shotgun sequence.
ACCESSION   DATIKR010000776 DATIKR010000000
VERSION     DATIKR010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181389"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /gene="lptD"
                     /locus_tag="VLL76_12225"
     CDS             <1..717
                     /gene="lptD"
                     /locus_tag="VLL76_12225"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HSV30320.1"
                     /translation="PLAMVAASPNGGNPSEIPNEDSIDFELDEINVLRANRMSGLDRV
                     EGGVRGAYGLRWAAYPPRGGFLAAQVAQGWRAHADSTYAKESGFGDNLSDYVGRVDVS
                     PNSNLSFLNRVRLDRNDFEVRRNESTISLGPRLLRLSASYMMFERSEVADRRQYLVYT
                     VASDLTRYWTAMGTVSHDLTEEGGPLGWQGRLIYSDECFAFVSNVRRFYTSDRDLESG
                     YDVTFNIVFKTLGDVPFNLF"
     gene            803..>1768
                     /locus_tag="VLL76_12230"
     CDS             803..>1768
                     /locus_tag="VLL76_12230"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSV30321.1"
                     /translation="MLARLAVLATVVVAALSGNPAMAQQDLDRIAAVVNDEVITIKDV
                     EQRVRMAMALSNLPDSADARRRVLPQVVRKMIDERLQMQEAGRLKISLSPADVDNGLA
                     AIEQQSRQPRGALVASLQRAGVDPSVVREQIRADLTWLRVATRVLQPTIRIGEEEVKD
                     RLETISSRQGQPEYLPAEIFLPIENPAQEEEMQRLGERLLEQLRSGAPFAALARQFSR
                     APTAGNGGAMGWVSGDMIDEDLFNVIKDMSPNQVSQLIRGGDGFRIVALVDRRIAGAK
                     ADPAHSTVTLSQILLPVPPDGPPRQSLMARASEVTRGARSCDELEA"
BASE COUNT          301 a          621 c          561 g          285 t
ORIGIN      
        1 cccttggcga tggtggccgc cagccccaac ggcggcaatc ccagcgaaat ccccaacgag
       61 gattcgatcg atttcgagtt ggacgaaatc aacgtgctgc gcgccaaccg catgtcgggc
      121 ctcgaccgcg tcgagggcgg tgtgcggggc gcctatggcc tgcgctgggc cgcctatccg
      181 ccacgcggcg gtttcctggc ggcacaggtg gcgcagggct ggcgggccca tgccgacagc
      241 acctatgcca aggaaagcgg tttcggcgac aatctgtcgg actatgtcgg ccgcgtggat
      301 gtcagcccca acagcaacct ttccttcctc aatcgcgtgc gcctcgatcg caacgatttc
      361 gaggtccgcc gcaacgaaag cacgatttcg ttggggccgc ggctgttgcg tctcagtgcc
      421 agctacatga tgttcgaacg cagcgaggtc gccgaccgcc gccaatacct ggtctacacc
      481 gtggcctccg acctgacccg ctattggacg gccatgggca ccgtcagtca tgacctgacc
      541 gaggaaggcg gcccgctggg ctggcagggg cggctcatct actcagacga atgcttcgcc
      601 ttcgtcagca acgtccgccg cttctacacc agcgaccgcg acctcgaatc cggttacgat
      661 gtgaccttca acatcgtttt caagactttg ggcgatgtgc cgttcaatct gttctagcca
      721 cgcacatatc cccttcgcgc gtcttttcgc caaggggcat caaggccgac aatccggcgg
      781 tacaccgagg gaagggctgt ccatgcttgc acgtctcgcc gtcctggcca ccgtggtcgt
      841 cgccgccctg tcgggcaatc cggcgatggc ccaacaggac cttgaccgca tcgccgccgt
      901 ggtcaacgac gaggtcatca ccatcaagga cgtcgagcag cgcgtccgca tggcgatggc
      961 gctgtcgaac ctgcccgaca gcgccgacgc ccgccgccgc gtgctgcccc aggtggtgcg
     1021 caagatgatc gacgagcgcc tgcagatgca ggaagccggc cgcctgaaaa tctcgttgag
     1081 ccccgccgac gtggacaacg gcctggccgc catcgagcag caaagccgcc agccacgtgg
     1141 cgccctggtc gccagcctgc agcgcgccgg cgtcgatccg tcggtggtgc gcgagcagat
     1201 ccgcgccgac ctgacgtggc tgcgcgtcgc cacgcgggtg ctgcagccga ccatccgcat
     1261 cggcgaggag gaggtcaagg accgcctcga gaccatcagc agccgccagg gccagccgga
     1321 atacctgccg gccgagatct tcctgcccat cgagaatccc gcccaggaag aggaaatgca
     1381 gcgcctgggc gaacgcctgc tcgagcaatt gcgctcgggc gctccgttcg ccgccctggc
     1441 gcgccagttc tcgcgcgcgc cgaccgccgg caacggcggc gccatgggct gggtgtccgg
     1501 cgacatgatc gacgaggacc tgttcaacgt catcaaggac atgagcccca accaggtgtc
     1561 gcaattgatt cgcggcggcg acggtttccg catcgttgcc ctggtcgatc gccgcatcgc
     1621 cggcgccaag gccgatcccg cgcattccac ggtcacgttg agccagatcc tgttgccggt
     1681 gccgcccgac ggcccgccgc gccagtccct gatggcgcgc gcctccgagg tgacgcgcgg
     1741 cgcccggagc tgcgacgaac tggaggcc
//
LOCUS       DATIKR010000777         2498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_181403, whole genome shotgun sequence.
ACCESSION   DATIKR010000777 DATIKR010000000
VERSION     DATIKR010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181403"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..484)
                     /locus_tag="VLL76_12235"
     CDS             complement(167..484)
                     /locus_tag="VLL76_12235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV30322.1"
                     /translation="MERTIKPEALKTTRADKHLIDVRRAADRDASTEQIPGATWHDPE
                     KLADWAAGLPKDKEIVLYCMRGGSVSNGVVDALQAQGLNARFIEGGLEGWKAAGGATA
                     AKV"
     gene            complement(704..952)
                     /locus_tag="VLL76_12240"
     CDS             complement(704..952)
                     /locus_tag="VLL76_12240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30323.1"
                     /translation="MSEKIIVSHWENSYSGAVKRLNAIETQLAELEWAAAPIFTINGL
                     KREQMVAMNSMLLHEVFFDSLGTSQADARLARPDRPGF"
     gene            complement(1016..2386)
                     /gene="chrA"
                     /locus_tag="VLL76_12245"
     CDS             complement(1016..2386)
                     /gene="chrA"
                     /locus_tag="VLL76_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002707587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HSV30324.1"
                     /translation="MSDIPATPTSDIPATPPPTPTLGEAFKYWLKLGFIAFGGPVGQI
                     AMMHTELVERRRWLSERRFLHALNYCMLLPGPEAIQLAIYISWLMHGVKGAVMTGVLF
                     FMPAFVIVTVLAGVYLSYGHLPALQGILYGIKPAVVAVVLFAAWRIGSKVLRNEVLMT
                     IAALAFIGIFFFKIGFPWIVLAAAILGSIGGKLLPAKFKVGGGHGGHGAADQSHGPAI
                     IDDDTPPPPHAKFSWNRLIVMTVIFLALWGAIMLALRPEPTLFDMGGFFTKAAFLTIG
                     GAYSVLPFVYQGAVEYFNWLTGPQMMAGLALGETTPGPLIKFVTWVGYLGAVSHGVFA
                     NPIAAGLAGAAVATFFTFLPSFWFILAGGPIVEATRGELKFTAPLTAITAAVVGVILN
                     LALFFAWHTFWPKATEAAPFSGPFEWLAVLVAIAAFLALWKYKQDIMKVIGVCALFGL
                     VYSFFI"
BASE COUNT          460 a          720 c          860 g          458 t
ORIGIN      
        1 ccaggatttt cgtgaagtcg tggcgatcgg tttggtgctc cgtatcgttg atccaggcat
       61 ggagctcggc atagtccttg ccggtgcggg acaaactggt gtgcatatgc ttggtggtgg
      121 atgccatgat ggagtccttt cagggttatg tgtttggatg agttcgtcag accttggcgg
      181 cggtcgcgcc gccagcggct ttccagccct cgaggccgcc ttcgatgaag cgcgcgttca
      241 gcccttgcgc ctgcaaggca tcgaccacgc cgtttgagac cgagcctccg cgcatgcagt
      301 agagaacgat ctccttgtcc ttgggcaagc cggcagccca gtcggcgagt ttttccgggt
      361 cgtgccaggt ggcgccggga atctgttcgg tcgaggcgtc acggtcggcg gcgcggcgca
      421 cgtcgatcag atgcttgtcg gcgcgcgtgg ttttcagggc ttcgggtttg atggtgcgtt
      481 ccatgttcag tctccgtttg ttgggtgatg gccgccagct tctgcgaggc ggcggcaaag
      541 ttgatgttgt tcatccaggc atcgacatag gcgctggcct tggtgccgaa gtccatatgg
      601 tagctgtgct cgtacatgtt cgagggccag cagcacccag cccgaaccgc cgcccatggc
      661 cttgcccgtg gcggcaaact gggccgccca ttggtcgagg ccgtcaaaat cctggtcgat
      721 ccgggcgggc gagtcgggca tcggcctggc tggtgccgag gctgtcgaaa aacacctcgt
      781 gcagtagcat cgagttcatc gccaccatct gctcgcgctt gaggccgttg atggtaaaga
      841 tcggtgccgc cgcccattcg agttcggcca gttgcgtttc gatggcgttg agccgcttca
      901 ccgcgccgct gtagctgttc tcccagtggc tgacgatgat cttttcggac atcccgacga
      961 tggcgccgcc cggggttgca cgacaggggt ttgattgcgt agggcatggt ggtcctcaga
     1021 tgaaaaaaga ataaacgagg ccgaacagcg cgcaaacgcc gatgactttc atgatgtcct
     1081 gcttgtattt ccacagcgcg aggaaggcgg cgatggcgac gagcacggcc aaccactcga
     1141 acggcccgga gaagggcgcg gcctcggtgg ccttgggcca gaaggtgtgc caggcgaaga
     1201 acagggcgag attcaagatc acgccgacga cggcggcggt gatcgcggtg agcggcgcgg
     1261 tgaacttgag ttcgccgcgg gtggcctcga ctatggggcc gccagcgagg ataaaccaga
     1321 aactgggcag gaaggtgaag aaggtcgcca ccgccgcgcc cgccagaccg gccgcgatcg
     1381 ggttggcgaa aacgccatgg ctgacggcgc cgagatagcc gacccaggtg acgaacttga
     1441 ttagcggccc cggcgtcgtt tcgcccagcg ccagaccggc catcatctgc gggccggtga
     1501 gccagttgaa gtattccacc gcgccctgat agacgaaggg caggacggag taggcgccgc
     1561 cgatggtgag gaaggccgcc ttggtgaaga acccgcccat gtcgaaaagc gtcggctcgg
     1621 gacgcaaggc cagcatgatg gctccccaca gggcgaggaa gatgaccgtc atcacgatca
     1681 acctgttcca ggagaacttc gcgtgcggcg gcggcggcgt gtcgtcgtca atgatggctg
     1741 ggccgtgcga ctggtcggcg gcgccgtggc cgccatggcc gccgccgacc ttgaacttgg
     1801 ctggcagcag cttgccgccg atggagccga ggatggcggc ggcaagcaca atccacggaa
     1861 agccgatctt gaagaaaaag atgccgatga aggccagcgc ggcaatcgtc atcagcacct
     1921 cgttcctcag caccttgctg ccgatgcgcc aggccgcaaa gagcaccacg gcgaccacgg
     1981 cgggcttgat gccgtagagg atgccctgca aggccggcaa gtggccataa ctcagataga
     2041 cgccggccag cacggtgact atgacgaagg cgggcatgaa gaacaggacg ccggtcatca
     2101 ccgcgccctt gacgccatgc atcagccaac tgatgtagat ggcaagctgg attgcctccg
     2161 gccccggcag cagcatgcag tagttgagcg cgtgcaggaa gcgacgctcg gaaagccagc
     2221 ggcggcgctc gaccagttcg gtgtgcatca tcgcaatctg cccgaccggg ccgccgaagg
     2281 cgatgaagcc cagtttgagc cagtatttga aagcttcgcc gagcgtgggg gtgggcggcg
     2341 gcgtggcggg gatgtcactc gtcggtgtgg cggggatgtc actcattggg acgctcctgt
     2401 gtagttgcga taaatgttgt caaagacgca cgcggcttgc gccagccgtt ggtcgtcatg
     2461 gggtgcgttg gcgcacagac cggccagcac ggctttcc
//
LOCUS       DATIKR010000778         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_132479, whole genome shotgun sequence.
ACCESSION   DATIKR010000778 DATIKR010000000
VERSION     DATIKR010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132479"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VLL76_12250"
     CDS             complement(<1..329)
                     /locus_tag="VLL76_12250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30325.1"
                     /translation="MRRLAAPFVMVALLAGCGEVPKPFRHEGPPSALARPKLMRGVTV
                     RPVEGRDDGAAIAEAVVKALEPHEIPAIVQSGPAFGHVLEAQPAGDGLQWMLKSPEGE
                     TLPIYVHP"
     gene            complement(420..1184)
                     /gene="pgeF"
                     /locus_tag="VLL76_12255"
     CDS             complement(420..1184)
                     /gene="pgeF"
                     /locus_tag="VLL76_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HSV30326.1"
                     /translation="MITLSALNEINRIRHGFFTREGGASQGIYASLNVGVGSNDERAA
                     VMENRARAMAMLDLPSEALVTVYQVHSPDVAVVEAPWQGEPPKADAMVTTVPGLALGI
                     LTADCAPVLFADRRGGVVGAAHAGWRGAVAGVLDNTIAKMVEMGARKKNIVAAVGPCI
                     GQRSYEVGPEFPAPFLAEDPANADFFAASAKPGHHLFDLPGYISRRLAKLGVTEVTRV
                     PADTCRDEARFFSYRRTTLRREPDYGRQLSAIVLER"
     gene            complement(1195..>2097)
                     /locus_tag="VLL76_12260"
     CDS             complement(1195..>2097)
                     /locus_tag="VLL76_12260"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV30327.1"
                     /translation="SQMFGELLGLWCVVMWQSMKMPARFVLAEMGPGRGTLMADMLRA
                     ARTVPAFLAAADIWLVETSPALRQRQRETLKDHAVQWAERFEDLPPGPLLLVTNELFD
                     ALPIRQFEKRDGTWHERLVGHGEQGFEFVLGPEEVPDLPDTVLAARDGSVAETCPEGR
                     ALAAAIGKRLNRDLGAALIVDYGHGRSAAGDTLQAVKRHKFHPVLQAPGSADLTAHVD
                     FESLAVAAVPARAWGPVGQGEFLRRLGIETRAALLAQAGGPKVQAELEGQLRRLIDPG
                     EMGTLFKVLALAHPALPCPPGLAP"
BASE COUNT          314 a          728 c          762 g          293 t
ORIGIN      
        1 gggtgcacat agatgggcag ggtctcgccc tcgggcgatt tcagcatcca ctgcaggccg
       61 tcgcccgccg gctgcgcctc gagtacgtgg ccgaaggcgg ggccgctctg aacgatggcg
      121 ggaatctcgt gcggctccag cgccttgacc accgcctcgg cgatggcggc gccgtcgtcg
      181 cggccctcga ccgggcgcac ggtgacgccg cgcatcagct tgggccgcgc cagcgccgag
      241 ggcggaccct cgtggcggaa cggctttggc acctcgccgc agccggcaag cagggcgacc
      301 atcacgaagg gggcggctag gcggcgcatc agccgcccgc caccatggcg acgcaggtcg
      361 ccagggtccc gatcgcgatg aaggccatca gcatcagaaa atggggcatg gcggtctcgt
      421 cagcgttcca acacgattgc cgacaactgg cggccgtaat cgggttcgcg gcgaagcgtg
      481 gtacgccgat agctgaagaa gcgggcctcg tcgcggcagg tgtcggcggg cacccgcgtc
      541 acctcggtga cgcccagctt ggccagccgg cgcgagatgt agcccggcag gtcgaacagg
      601 tgatggccgg gcttggcgct ggcggcgaag aagtcggcgt tggcggggtc ctcggccagg
      661 aagggggcgg ggaattccgg cccgacctca tagctgcgct ggccgatgca ggggccgacg
      721 gcggcgacga tgttcttctt gcgcgccccc atctccacca tcttggcgat ggtgttgtcg
      781 agcacgccgg ccaccgcccc gcgccagccg gcatgggcgg cgccgacgac gccgccacgg
      841 cggtcggcga acagaaccgg ggcgcaatcg gcggtcagga tccccagcgc caggccgggc
      901 acggtggtca ccatggcgtc ggccttgggc ggctcgccct gccacggcgc ctcgaccacc
      961 gcgacgtcgg ggctgtggac ctgatagacg gtgaccagcg cctcggacgg caggtccagc
     1021 atggccatgg cccgcgcccg gttttccatc accgccgcgc gctcgtcatt cgagcccacg
     1081 ccgacgttga ggctggcgta gatgccctgc gaggcaccgc cctcgcgggt gaagaacccg
     1141 tggcgaatgc ggttgatctc gttgagggcg gacagggtga tcatgcggtc cttcttacgg
     1201 ggcgagcccg ggtgggcagg gcagcgcggg gtgcgccagc gccagaacct tgaacagggt
     1261 gcccatttcg ccgggatcga tcaagcgccg caattgccct tccagctcgg cctggacctt
     1321 aggcccgccc gcctgtgcca acagggcagc cctggtctcg atgcccagcc ggcgcaggaa
     1381 ttcgccctgg ccgaccggcc cccaggcgcg cgccggcacc gccgcgacgg ccagggattc
     1441 gaagtccaca tgggcggtca ggtcggcgct gccgggcgcc tgcagcaccg ggtggaactt
     1501 gtggcgcttg accgcctgca gggtgtcgcc ggcggccgag cggccatggc cgtaatcgac
     1561 gatcagggcg gctccgaggt cgcggttgag gcgcttgccg atggcggcgg ccagggcgcg
     1621 gccctcgggg caggtctcgg ccaccgagcc gtcgcgggcc gccagcaccg tatcgggcag
     1681 gtcgggaacc tcctcggggc cgaggacgaa ctcgaagccc tgctcaccat ggccgaccag
     1741 gcgttcgtgc cacgtgccgt cgcgcttctc gaactgacgg atgggcaggg cgtcgaacaa
     1801 ttcgttggtg accaacagca gcggacccgg cggcaaatcc tcgaaccgct cggcccattg
     1861 caccgcatgg tccttcagag tctcgcgctg gcgctggcgc agggccgggc tggtctcgac
     1921 cagccagatg tcggcggcgg ccaggaaggc cggcaccgtg cgggcggcgc gcagcatgtc
     1981 ggccatcagg gtgccgcgcc ccggccccat ttcggccagc acgaagcggg cgggcatctt
     2041 catgctctgc cacatcacca cgcaccacag ccccagcaat tcgccgaaca tctggct
//
LOCUS       DATIKR010000779         2704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_192845, whole genome shotgun sequence.
ACCESSION   DATIKR010000779 DATIKR010000000
VERSION     DATIKR010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192845"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VLL76_12265"
     CDS             <1..429
                     /locus_tag="VLL76_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HSV30328.1"
                     /translation="FIVGFPGETDADFAASIDLVRQVGFVNTYSFKYSARPGTPAAGM
                     PNQVDEAVKDARLAELQALLYDQTVRFNRASVGKVMKVLLDRPGRHPGQLVGRSPYMQ
                     PVHVDDVAHLMGKVVAVEITEVHPNSLAARPVGSLERECA"
     gene            426..1397
                     /locus_tag="VLL76_12270"
     CDS             426..1397
                     /locus_tag="VLL76_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HSV30329.1"
                     /translation="MSDEARQTTVVREFQDNALLPVLFGPHNVNLERIESQMGVALNA
                     RGNAVSISGAAEAADDAGQVLVSLYELARKQGHLETADVDAAMRMSRHAVAPGDDLVL
                     RTRKRHIAPRTPTQADYLRALNRDPLVFGLGPAGTGKTYMAVAKAVSMMLNGEVDRII
                     LSRPAVEAGERLGFLPGDLKEKVDPYLRPLYDALYDMLPGDQVVKKLTAGEIEVAPLA
                     FMRGRTLANSFIILDEAQNTTSVQMKMFLTRMGEGSRMVVTGDMSQVDLPSGVRSGLK
                     DAIDIIDGMPGVSFINFTDRDVVRHDLVTRIVRAYDAAERARKGGQP"
     gene            1394..1909
                     /gene="ybeY"
                     /locus_tag="VLL76_12275"
     CDS             1394..1909
                     /gene="ybeY"
                     /locus_tag="VLL76_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HSV30330.1"
                     /translation="MIPVIDMSVECAAWTEALPGAQDLVRRCVVASLDGAELPDGPVE
                     VSVVLTDDDAVQALNRDWRGKDKPTNVLSFAALDDEDAPLPEGAPLLLGDVVLAYQTC
                     AAEAVDQGKTLADHMAHLVVHGVLHLLGYDHEESEEEAEEMEAEETAILAGLGIADPY
                     AQPPSPTEGGR"
     gene            1915..>2704
                     /locus_tag="VLL76_12280"
     CDS             1915..>2704
                     /locus_tag="VLL76_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HSV30331.1"
                     /translation="MNEPGSSRTPRENGANGNGKPPRDENLIDTLRGWMRALRRSKGS
                     ETVREALEELIEDRDDAGIPIDDHERVLLGNILHLRDVTADDVMVPRADIVAVEAAMG
                     RDELVDLFTKCGHSRLPVYRGTLDDVVGMVHIKDVLAAGRVDKPFQLPRIVRRVLFVS
                     PSMRVLDLMLEMRLKRTHMALVVDEYGGIDGLVTIEDLVEQIVGEIEDEHDRAVEPDM
                     VVRADGVIEADARTPIDEFEEKVGQVLSEEEREDVDTLGGLVFFI"
BASE COUNT          457 a          917 c          941 g          389 t
ORIGIN      
        1 ttcatcgtcg gcttccccgg cgaaaccgac gccgatttcg ctgcgtccat cgacctggtg
       61 cgccaggtcg gcttcgtgaa cacctattcc ttcaagtatt ccgcccgtcc cggcacgccg
      121 gcggccggca tgcccaacca ggtggacgag gcggtcaagg acgcccggct ggccgagctg
      181 caggcgctgc tctatgacca gacggtccgg ttcaaccgcg cctcggtcgg caaggtgatg
      241 aaggtgctgc tcgaccgccc cggccgccat cccggccagt tggtcggccg cagcccctac
      301 atgcagccgg tccacgtgga cgacgtcgcc catctgatgg gcaaggtggt cgcggtcgaa
      361 atcaccgagg tccatcccaa cagcctggcg gcgcggccgg tgggcagcct ggagagggaa
      421 tgcgcttgag cgacgaggcc cgccagacca ccgtggtccg cgaattccag gacaacgcgc
      481 tgctgccggt gctgttcggc ccccacaatg tcaacctgga acgcatcgaa tcgcagatgg
      541 gcgtggcgtt gaacgcgcgc ggcaacgcgg tgtcgatctc gggcgccgcc gaggccgccg
      601 acgacgccgg ccaggtgctg gtgtcgctgt acgaactggc gcgcaagcag ggccatctgg
      661 aaaccgccga cgtggacgcc gccatgcgca tgtcgcgcca tgcggtggcg ccgggcgacg
      721 atctggtgct gcgcacccgc aagcgccaca tcgccccgcg cacgccgact caggccgact
      781 atctgcgcgc gctcaaccgc gatccgctgg tgttcgggct gggcccggcc ggtaccggca
      841 agacctacat ggcggtcgcc aaggcggtgt ccatgatgct gaacggcgag gtcgaccgca
      901 tcatcctgtc gcgcccggcg gtcgaggccg gcgagcgcct gggctttctg cccggcgatc
      961 tcaaggagaa ggtcgatccc tatctgcggc cgctctacga cgccttgtac gacatgctgc
     1021 ccggcgacca ggtggtcaag aagctgaccg ccggcgagat cgaggtggcg ccgctggcct
     1081 tcatgcgcgg ccgcaccctg gccaattcgt tcatcatcct ggacgaggcg cagaacacca
     1141 ccagcgtgca gatgaagatg ttcctgaccc gcatgggcga gggctcgcgc atggtggtca
     1201 ccggcgacat gtcgcaggtc gacctgccgt cgggggtgcg ctcgggcctc aaggacgcca
     1261 tcgacatcat cgacggcatg cccggcgtgt cgttcatcaa tttcaccgac agggacgtgg
     1321 tgcgccacga cctggtgacc cgcatcgtgc gcgcctacga cgccgccgag cgtgcccgca
     1381 aggggggcca gccatgatcc cggtcatcga catgagcgtc gaatgcgccg cctggaccga
     1441 ggcgctgccc ggcgcccagg acctggtccg gcgttgcgtc gtcgcctcgc tggacggcgc
     1501 cgagctgccc gacgggccgg tcgaggtgtc ggtggtgctg accgacgatg acgcggtgca
     1561 ggcgctcaac cgcgactggc gcggcaagga caagcccacc aacgtgctgt ccttcgcggc
     1621 gctcgacgac gaggacgcgc cgctgcccga gggcgcgccg ctgcttctgg gcgacgtggt
     1681 gctggcctac cagacctgcg ccgccgaggc ggtcgaccag ggcaagaccc tggccgacca
     1741 catggcccat ctggtggtgc acggcgtgct gcacctgttg ggctacgacc acgaggaaag
     1801 cgaggaagag gccgaggaga tggaggcgga ggaaaccgcc atcctggccg gcctgggaat
     1861 cgccgacccc tacgcgcaac caccgtcccc caccgaagga gggcgatgag gaccatgaac
     1921 gaacccggca gtagtaggac gccccgtgag aacggggcca acggaaacgg caaaccgccg
     1981 cgtgacgaga acctgatcga caccctgcgc gggtggatgc gggcgttgcg gcgctcgaag
     2041 ggcagcgaga cggtgcgcga ggctctggaa gagctgatcg aggaccgcga cgacgccggc
     2101 atccccatcg acgaccacga gcgcgtgctg ctgggcaaca tcctgcacct gcgcgacgtc
     2161 accgccgacg acgtcatggt accgcgcgcc gacatcgtcg ccgtcgaggc cgccatgggc
     2221 cgcgatgagc tggtcgacct gttcaccaaa tgcggccatt cccgcctgcc ggtctatcgc
     2281 ggcacgctcg acgacgtggt cggcatggtc cacatcaagg acgtgctggc cgccggccgc
     2341 gtcgacaagc cgttccaact gccgcgcatc gtgcgccggg tgctgttcgt gtcgcccagc
     2401 atgcgggtgc tcgacctgat gctggagatg cggctgaagc gcacccacat ggcgctggtg
     2461 gtggacgaat acggcggcat cgacgggctg gtcaccatcg aggacctggt cgagcagatc
     2521 gtcggcgaga tcgaggacga gcacgaccgc gccgtcgaac ccgacatggt ggtgcgcgcc
     2581 gacggcgtga tcgaggccga cgcccgcacc cccatcgacg aattcgagga gaaggtcgga
     2641 caggtgctga gcgaggagga gcgcgaggac gtcgacaccc tgggcgggct ggtgttcttc
     2701 atcg
//
LOCUS       DATIKR010000780         2870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_217568, whole genome shotgun sequence.
ACCESSION   DATIKR010000780 DATIKR010000000
VERSION     DATIKR010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217568"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VLL76_12285"
     CDS             complement(<1..250)
                     /locus_tag="VLL76_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30332.1"
                     /translation="MSANEYAKVKGYINEVKANPGRYSAPSDGSVEGTRNCIDFAEGA
                     LKAAGKAETTQDLFEKGQLSGMAGSEINRRREQQNNKGN"
     gene            complement(247..456)
                     /locus_tag="VLL76_12290"
     CDS             complement(247..456)
                     /locus_tag="VLL76_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30333.1"
                     /translation="MTEKILAKHVGHVSVVIEKPDGTIEGPIGFGPVNVGAKKDAVFG
                     GPGTVRDDSGYANSGNGRYPPNPLP"
     gene            complement(690..764)
                     /locus_tag="VLL76_12295"
     tRNA            complement(690..764)
                     /locus_tag="VLL76_12295"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(730..732),aa:Val,seq:cac)
     gene            complement(840..1421)
                     /locus_tag="VLL76_12300"
     CDS             complement(840..1421)
                     /locus_tag="VLL76_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012097399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HSV30334.1"
                     /translation="MNRICVFCGSSTGTRPEYVAAAEALGRMLAERGIGLVYGGGNIG
                     LMGAVANAALTNGAEVIGVIPEALMKFEVGHLDLTALHVVGSMHERKALMAELSDAFI
                     ALPGGIGTMEELFEVWTWGQLGLHPKPLGFLDVAGYYDHLHAFLDHMTAEGFLQPRHR
                     AMVAVDDDPARLLARFAAYSPPAVVKVIERETT"
     gene            complement(1421..2047)
                     /gene="thiE"
                     /locus_tag="VLL76_12305"
     CDS             complement(1421..2047)
                     /gene="thiE"
                     /locus_tag="VLL76_12305"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HSV30335.1"
                     /translation="MSDCRLYLITPPRIENPFEWVKIWEPVLDAGDIACVQIRLKDVD
                     DDTVARVVDVLRPPAQKRGIAVLLNDRPDLAFETGCDGVHIGQSDASYAEARKALGGE
                     AIVGVTCHDSRHLAMEAGEAGADYVAFGAFFPTDTKAVEHKAEIEILEWWTGLFTVPC
                     VAIGGITVDNCRPLVEARADFLAVSGGVWNHPAGPAEAVKAFNRIMGA"
     gene            complement(2049..>2870)
                     /locus_tag="VLL76_12310"
     CDS             complement(2049..>2870)
                     /locus_tag="VLL76_12310"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HSV30336.1"
                     /translation="GKLVILPVDQGFEHGPARSFAPNPAGYDPHYHYRLAIESGCSAY
                     AAPLGALEAGADTFAGQVPLILKLNSANSLSRDKQGATQAVTGNVRDALRLGCAAIGY
                     TIYPGSDSAYLMFEDLRELIAEAKEHGLAAVVWSYPRGGDVSAKGETAIDVVAYGAHM
                     ACLLGAHVVKVKLPTDHIEQDEARKAYEKNGIDVSTLTKRVAHVVQSCFNGRRIVVFS
                     GGAAKADLNAVYDEVRAIRDGGGNGSIIGRNSFQRPHDEALSMLGTIADILAGKS"
BASE COUNT          469 a          916 c          961 g          524 t
ORIGIN      
        1 ggttgccctt gttgttctgc tgctccctac ggcggttaat ctcgcttcct gccattcccg
       61 acaattgccc tttctcgaac aaatcctggg ttgtctccgc cttgccggcg gctttcaatg
      121 ccccttcggc gaagtcgatg caattgcggg tcccctcgac agaaccatcc gatggcgccg
      181 agtagcggcc cggattggcc ttgacctcat tgatgtaccc tttgaccttg gcgtattcat
      241 tggcactcaa ggtaatgggt ttggaggata cctaccgttc ccggaattgg cgtagccgct
      301 gtcatcgcgg accgtcccag gaccgccaaa caccgcatcc ttctttgccc ctacgttgac
      361 gggaccaaag ccgatggggc cttcaatagt tccatccggt ttctcgatga cgacggaaac
      421 gtgtcccaca tgcttggcga gaattttctc cgtcatcgac atcgatccaa atacccttga
      481 tgaaatcatg gggcgggcgc aaattcccgc cccacacgtc gggatagggc ggatattttt
      541 gctggaacat gcggtgctgg aagtcaaccg accgcatcgg catgggggcg cccgcgctcg
      601 cttaacgcgt atcttgcttg cgggcagaaa aaaggccggc tcaagagccg acctgttcgg
      661 aaccagtcaa agctggtgga ggaaagagat ggtgggcgat gtagggattg aacctacgac
      721 cccacccgtg tgaagggtgt gctctcccgc tgagctaatc gcccatctct tctcaggccc
      781 accgtcgccg gtggagggcc gctttatatt gcggtgccgg gggcctgtca agcggtgtgt
      841 cacgtggttt cgcgttcgat caccttgacc accgccggcg ggctgtaggc ggcgaagcgg
      901 gccagcaatc gcgccgggtc gtcgtcgacc gccaccatcg cgcggtggcg cggctgcagg
      961 aagccttcgg cggtcatgtg gtcgaggaag gcgtgcaggt ggtcgtaata gccggccacg
     1021 tccaaaaacc ccagcggctt ggggtgcagg cccaactggc cccaggtcca gacctcgaac
     1081 aattcctcca tggtgccgat gccgccgggc agggcgatga aggcgtcgga caattcggcc
     1141 atcagcgcct tgcgctcgtg catggagccg acgacgtgca gggcggtcag gtcgaggtgg
     1201 ccgacctcga acttcatcag cgcctcgggg atgacgccga tgacctcggc gccgttggtc
     1261 agcgcggcgt tggcgacggc gcccatcagg ccgatgttgc cgccgccata gaccagcccg
     1321 atgccgcgct cggccagcat gcggcctagc gcctcggcgg cggccacgta ttcgggccgg
     1381 gtgccggtgc tggagccgca gaagacgcag atgcggttca tcaggcgccc atgatcctgt
     1441 tgaacgcctt caccgcctcg gcggggccgg cggggtggtt ccacacgccg cccgagacgg
     1501 ccaggaaatc ggcgcgggcc tcgaccagcg ggcggcaatt gtccaccgtg atgccgccga
     1561 tggcgacgca gggcacggtg aacaggccgg tccaccattc cagaatctcg atctcggcct
     1621 tgtgctcgac ggccttggtg tcggtgggga agaaggcgcc gaaggccacg tagtcggcgc
     1681 cggcctcgcc ggcctccatg gccagatggc gcgagtcgtg gcaggtcacg ccgacgatgg
     1741 cctcgccgcc cagcgccttg cgggcctcgg cataactggc gtcggactgg ccgatatgga
     1801 cgccgtcgca gccggtctcg aacgccagat cggggcggtc gttcagcagt accgcgatgc
     1861 cgcgcttctg ggccggtggc cgcagcacat cgacgacgcg ggcgacggtg tcgtcgtcca
     1921 cgtccttcag ccggatctgg acgcaggcga tgtcgccggc atccaggacc ggctcccaaa
     1981 tcttgaccca ctcgaagggg ttctcgatgc ggggcggggt gatcagatag aggcggcagt
     2041 cgctcaagtc agctctttcc agcgagaatg tcggcgatcg tccccagcat ggacagggcc
     2101 tcgtcatgcg gccgctggaa gctgttgcgg ccgatgatgg agccgttgcc gccgccgtcg
     2161 cggatggccc tgacctcgtc atagacggcg ttcaggtccg ccttggcggc gccgcccgag
     2221 aagacgacga tcctgcgtcc gttgaaacac gactgcacca cgtgcgcaac acgtttggtc
     2281 aatgtggaga cgtcgatgcc gttcttttca tacgccttgc gcgcctcgtc ctgctcgatg
     2341 tggtcggtcg gcagcttgac cttgaccacg tgggcgccca gcaggcaggc catgtgggcg
     2401 ccgtaggcga cgacgtcgat ggcggtttcg cccttggccg agacgtcgcc gccgcgcgga
     2461 taggaccaca ccacggcggc caggccgtgc tccttggcct cggcgatcag ctcgcgcagg
     2521 tcctcgaaca tcaggtaggc gctgtcggaa ccgggataga tggtgtagcc gatggcggcg
     2581 cagcccagac gcagcgcgtc gcgcacattg ccggtcaccg cctgggtggc gccctgcttg
     2641 tcgcgcgaca gcgaattggc gctgttgagc ttgaggatca gcggcacctg gccggcgaag
     2701 gtgtcggcgc ccgcttccag cgcgcccagc ggcgccgcat aggcgctgca gcccgattcg
     2761 atggccagtc ggtaatggta atgcgggtcg tagccggccg ggttgggggc gaagctgcgg
     2821 gcggggccgt gctcgaagcc ctggtccacc ggcaggatca ccagcttgcc
//
LOCUS       DATIKR010000781         3451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_217591, whole genome shotgun sequence.
ACCESSION   DATIKR010000781 DATIKR010000000
VERSION     DATIKR010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217591"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1294)
                     /locus_tag="VLL76_12315"
     CDS             complement(<1..1294)
                     /locus_tag="VLL76_12315"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV30337.1"
                     /translation="MADQDNILDVLLENIRDAVVVADGDRRLLRVNKAFEVVTGHSGD
                     SLSSPQDAHAQIAGEQMARAMATSVGARWQGAVRCADGDDRMFEVTVAAVNGDAPFPT
                     HYLGMLRPADDLPLDIGERRFGHDDLTGLPNRDIFVDRVDQAVLQVNRTGGSVALLMM
                     GLDRFTLVNDALGHAAGDRLLIEVARRLRQCIRETDTLVRLEGDKFAMVMQIADVDDS
                     VIVAEKVLHAVKEPFAIDGQEVVVTFSIGIALFPQDVNTGAALIKQGENALHYAKVSG
                     RNQYQFFSKDMNRKAKARLDLEARLRRALVNEEFVVFYQPKVSAETDRIVGAEALVRW
                     MDPDRGMVSPAEFIPVAEETGLIEQVGNWVLRKACEQNKGWHDSGIQPVRFSVNVSPR
                     QFRSRNFLDTVTGILTGIALDAKWLELEITESMLMHDVE"
     gene            1401..2330
                     /gene="nudC"
                     /locus_tag="VLL76_12320"
     CDS             1401..2330
                     /gene="nudC"
                     /locus_tag="VLL76_12320"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF001299.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HSV30338.1"
                     /translation="MIPLFYSAIPIDRAGHLRRDAQAMTGLLADPRRIVIPYWRELSL
                     VAPPKGLSFTGVQAAMLLDLADEVAFLGLAADGAPVLAADISGVAPEADGAGPGLGLG
                     GQWLALRTIVPAMDHGDSGLLAYARGLLGWLRRSRFCGSCGGPTEAREAGHVRACLDP
                     HCGAQQYPRTDPAVIMLVEDGERVLLHRQHAWPAGMWSILAGFVEPGETLEEAVAREV
                     FEETAITVADVRYAGSQPWPFPSSLMVGFTARATGIDLVPCPEELEDARWFSRAEIDR
                     DFSDAHRHDGSGPFLANPGTIARQMLEAWRRGE"
     gene            complement(2404..3138)
                     /locus_tag="VLL76_12325"
     CDS             complement(2404..3138)
                     /locus_tag="VLL76_12325"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF013180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSV30339.1"
                     /translation="MTNEYRTQPVPRAVMVSDFGRERDNAPSRQSYHAYPHMAPERHA
                     SHDAHDVTSVLGLPSEQVTPELLAALEPLLTELDGLRHQVERDTRRISVLAHQAERHC
                     VVPALNRRAFMRELDAFLANEGHAGAVVMLHLGGVERLRLAHGMAAGEGALRHACAAA
                     LSVLRGTDVVALLGGSDFALLLPNCGEADARERLAAIARKIDDPAFTWMGQPVVLTAR
                     CGIHALQAGESAEQAVAAADRERRGI"
     gene            3292..>3451
                     /locus_tag="VLL76_12330"
     CDS             3292..>3451
                     /locus_tag="VLL76_12330"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0034023 - 5-(carboxyamino)imidazole
                     ribonucleotide mutase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HSV30340.1"
                     /translation="MAKTAPQVGIIMGSQSDWETMRHAAQVLADLGVDFETRVVSAHR
                     TPQRLYDYA"
BASE COUNT          530 a         1202 c         1172 g          547 t
ORIGIN      
        1 cttccacgtc atgcatcagc atgctttcgg tgatctccaa ctccagccat ttggcatcca
       61 gcgcgatgcc ggtcagaatg ccggtgacgg tgtcgaggaa gttgcgcgag cggaactggc
      121 gcggcgacac gttgaccgaa aagcgcaccg gctggatgcc gctgtcgtgc cagcccttgt
      181 tctgctcgca ggccttgcgc agcacccaat tgccgacctg ctcgatcagg ccggtttcct
      241 cggcgaccgg gatgaattcc gcgggcgaca ccatgccgcg atcggggtcc atccagcgca
      301 ccagcgcctc ggcgccgacg atgcggtcgg tttcggcgct gaccttgggc tggtagaaga
      361 ccacgaattc ctcgttgacc agcgcccggc gcaggcgggc ctccaggtcc aagcgggcct
      421 tggccttgcg gttcatgtcc ttcgagaaga actggtactg gttgcggccc gaaaccttgg
      481 cgtagtgcag cgcgttctcg ccctgcttga tcagggcggc gccggtgttg acgtcctggg
      541 ggaacagggc gatgccgatc gagaaggtga ccaccacctc ctggccgtcg atggcgaacg
      601 gctccttgac cgcgtgcagc accttttcgg cgacgatgac gctgtcgtcc acgtcggcga
      661 tctgcatgac catggcgaat ttgtcgcctt ccagccggac caaggtgtcg gtctcgcgga
      721 tgcactggcg caggcggcgc gccacctcga tcagcagacg gtcgccggcg gcatggccga
      781 gcgcgtcgtt gaccagggtg aagcggtcca ggcccatcat cagcagcgcc accgacccgc
      841 cggtgcgatt gacctggagc acggcctggt cgacgcggtc gacgaagatg tcgcggttgg
      901 gcaggccggt caggtcgtca tggccgaagc ggcgctcgcc gatatccagc ggcagatcat
      961 cggccgggcg cagcatgccc agataatggg tgggaaacgg ggcgtcgccg ttgaccgccg
     1021 ccaccgtgac ctcgaacatg cggtcgtcgc cgtcggcgca gcgcaccgcg ccctgccagc
     1081 gggcgccgac cgaggtcgcc atggcgcggg ccatctgctc gcccgcgatc tgagcatggg
     1141 catcctgggg cgacgacagg gaatcgccag aatggccggt gaccacctcg aacgccttgt
     1201 tgacgcgcaa cagccggcgg tcgccatcgg caaccaccac cgcgtcgcgg atgttctcga
     1261 gtaggacgtc gaggatgttg tcttgatcgg ccacggatgc ccccctgggg cccaattttg
     1321 accaaccatg ccaaaagagc aatcgccttg tgcgctgtcc gacccttgag ggccgcccgg
     1381 cggcatgcca tggttccggc atgatcccat tgttctacag cgcaatcccc atcgaccgcg
     1441 ccggccacct gcgccgcgac gcccaggcca tgaccggcct gctggccgat ccgcgccgca
     1501 tcgtcatccc ctattggcgc gagctgtcgc tggtggcgcc ccccaagggc ctgagcttca
     1561 ccggcgttca ggccgccatg ctgctcgacc tcgccgacga ggttgcgttc ctcggccttg
     1621 ccgccgacgg cgccccggtg ctggccgccg acatttccgg cgtcgcgccc gaggccgacg
     1681 gcgccggacc cggcctgggc ctgggcgggc aatggctggc gctgcgcacc atcgtgccgg
     1741 ccatggacca cggcgattcc ggcctgctgg cctatgcgcg cggcctgctg ggctggctgc
     1801 ggcgcagccg gttctgcggc agttgcggcg gccccaccga ggcgcgcgag gccggccatg
     1861 tccgcgcctg cctcgatccc cattgcggcg cccagcaata cccgcgcacc gacccggcgg
     1921 tgatcatgct ggtcgaggac ggcgagcgcg tgctgctgca ccgccagcat gcctggccgg
     1981 ccggcatgtg gtcgatcctg gccggcttcg tcgagcccgg cgagacgctg gaggaggcgg
     2041 tcgcccgcga ggtgttcgag gagaccgcca tcacggtggc cgacgtgcgc tatgccggct
     2101 cgcagccgtg gccgttcccg tcgtcgctga tggtcggctt caccgcccgg gccaccggaa
     2161 tcgacctcgt cccctgcccc gaggaactgg aagacgcccg ctggttcagc cgcgccgaga
     2221 tcgaccgcga cttctcggac gcccaccgcc acgacggcag cggccccttc ctcgccaacc
     2281 cgggaaccat cgcccggcag atgctggagg catggcggcg gggagagtaa ggaaagagat
     2341 caaccagcaa gaacaccgcg cgggcttggc caggtcgagc ccggcgatga cggggcaggc
     2401 ttgctagatc ccccgccgtt cacggtcggc cgccgccacc gcctgttcgg cgctttcgcc
     2461 cgcctgcagc gcgtggatgc cgcaacgcgc ggtcaggacc accggttggc ccatccaggt
     2521 gaaggcgggg tcgtcgatct tgcgcgcgat ggcggccagg cgttcgcggg cgtcggcttc
     2581 gccgcaattg ggcagcagca gggcgaaatc gctgccgccc agcagcgcca ccacgtcggt
     2641 gccgcgcagc accgacagcg cggcggcgca ggcatgccgc agggctccct cgcccgccgc
     2701 catgccatga gcgaggcgca gacgctcgac gccgccgaga tgcagcatca ccaccgcgcc
     2761 ggcatggcct tcgttcgcca ggaaggcgtc cagctcgcgc atgaaggcgc ggcggttcag
     2821 cgccggcacc acgcaatggc gctcggcctg gtgggccagc acggaaatgc ggcgggtgtc
     2881 gcgctcgacc tggtggcgca ggccgtcgag ttcggtcagc agcggttcga gcgccgccag
     2941 caattcgggc gtcacctgct cggacggcag gcccagcacc gacgtgacgt cgtgggcatc
     3001 gtgggaggca tggcgttcag gcgccatgtg cggataggca tggtaggact ggcgcgacgg
     3061 cgcgttgtcg cgctcgcggc cgaaatcgct gaccatgacc gcccttggga cgggttgcgt
     3121 gcgatactcg ttggtcatga cgcacctccc ggaattcttc cggtcaccat gatcctagca
     3181 cgaattcgac cgtgaccgga cacaaatcgg aaactggcac ttgcacaggc gggcgcgatt
     3241 tctataatcc ccgctttcct gcggcccccc atattcggga gagggacgac gatggctaag
     3301 accgcccccc aggtgggcat tatcatgggc agccagtccg attgggaaac catgcgccac
     3361 gccgcgcagg tgctggccga tcttggcgtc gatttcgaga cccgcgtggt ttcggcccac
     3421 cgcacgcccc agcggctgta cgactatgcc a
//
LOCUS       DATIKR010000782         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_34995, whole genome shotgun sequence.
ACCESSION   DATIKR010000782 DATIKR010000000
VERSION     DATIKR010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34995"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VLL76_12335"
     CDS             complement(<1..470)
                     /locus_tag="VLL76_12335"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSV30341.1"
                     /translation="MSPILLATDLSPWCDRAKERAILLARRLGRPLRVVVVVENDPGE
                     AEMRRIATDLSEMLAAEAGDLATETVIRQGEAWEEIGAEVRSSGAGLVVMGRHRSDAL
                     RDFFLTPTAALVDAGPPILQAVNASSGAWRDVVVCTDFSERGRRALDQAVALAG"
     gene            complement(532..2175)
                     /locus_tag="VLL76_12340"
     CDS             complement(532..2175)
                     /locus_tag="VLL76_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011707241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HSV30342.1"
                     /translation="MHGVAQALLVLSGTAALGLLFGQAKILGVRLGVGGVLFAGIAFG
                     HFGVHMDADMLQFAREFGLVLFVYSIGVAVGPGFFQAFRKDGLAMNAMAVSIVVLGTL
                     TAVAIHLLTGIELPAVLGMLSGAVTNTPSLAAGQEVLGQLGAQNAGAVTGQAYAVAYP
                     FGIVGILLSMLAVRAVFKLDPVSAAKQFDAEREKTFCALETVNVEIRNPSVVGARLRD
                     LDELRDMGVVLSRVWHDGSQHVVHADDTLAEGDVVLAVGPKRNLAKLSRLLGPVASVD
                     LKAINSADVTWERMVVTRHEVLGKALHELDFRGEHGIVVSRVNRGGHELVPDAHLRLQ
                     FGDMLTVVGDPNAMPLVAGIVGNRSKALQETQMVPIFIGIALGMVVGSIPLMIPGLPS
                     AVKLGLAGGPLLVALLLSRLGHAGPLVWFMTPAANHVLRDLGITLFLAAVGIKSGAGF
                     LDTLIHGQGLAWMGWGAVVTVLPLLIVGLVGYWLTKTNYLSLCGILAGSMTDPPALAF
                     AQQMHPSEAPILAYAAVYPIVMVLRIVAPQLVALLLWGG"
BASE COUNT          410 a          833 c          776 g          312 t
ORIGIN      
        1 tcgccggcca atgccaccgc ctggtcgagg gcacgccgcc cccgttcgga aaaatccgtg
       61 cacaccacca cgtcgcgcca ggcgccgctg gaggcgttga ccgcctgcag gatgggcggg
      121 ccggcatcga ccagcgcggc ggtgggcgtc aggaagaaat ctctcagcgc gtccgagcga
      181 tgccgcccca tcaccaccag cccggcgccc gaagaccgca cctcggcgcc gatctcctcc
      241 cacgcctcgc cctggcggat gacggtttcg gtggcgaggt cgcccgcctc ggccgccagc
      301 atttcggaca ggtcggtggc gatccgccgc atctcggcct cgccggggtc attctcgacc
      361 accaccacca cccgcaatgg ccggcccagg cggcgcgcca gcaggatggc gcgttccttg
      421 gcacggtcgc accaggggga caggtcggtc gccaacagga tgggggacat ggacgccgcc
      481 tcctcgtctg tcccccttcg aggttggacg cccggcgccc cgccgcaacc cctatccgcc
      541 ccacaaaagc agggcgacca gttgcggcgc gacgatgcgc agcaccatga cgatgggata
      601 gaccgccgca taggccagga tcggcgcctc ggacgggtgc atctgctgcg cgaaggccag
      661 cgccggcggg tcggtcatgc tgcccgccag gatgccgcac aggctgaggt agttggtctt
      721 ggtgagccaa taaccgacca gtccgacgat cagcagcggc agcacggtga ccaccgcgcc
      781 ccagcccatc caggccaggc cctggccgtg gatcagggtg tcgaggaagc cggcgcccga
      841 cttgatgccc accgccgcca ggaacagggt gatgcccagg tcgcgcagca cgtggttggc
      901 ggccggcgtc atgaaccaca ccagcgggcc ggcatgcccc aggcgcgaca gcagcagcgc
      961 caccagcagc ggtccgccgg ccagccccag tttgaccgcc gacggcaggc cggggatcat
     1021 cagcgggatc gagccgacca ccatgcccag ggcgataccg atgaagatcg gcaccatctg
     1081 ggtttcctgc agggccttgg agcggttgcc gacgatgccg gcgaccagtg gcatggcatt
     1141 gggatcgccg accaccgtca gcatgtcgcc gaattgcagg cgcagatggg catcgggaac
     1201 caactcgtgg ccgccacggt tgacccggct gacgacgatg ccgtgctcgc cccggaaatc
     1261 cagttcgtgc aaggccttgc ccagcacttc atggcgggtg acgaccatgc gctcccaggt
     1321 cacgtcggcc gagttgatgg ccttgaggtc gacgctggcg accggtccca gcaggcggct
     1381 gagcttggcg aggttgcgct tcggccccac cgccagcacc acgtcgccct cggccagggt
     1441 gtcgtcggca tggaccacgt gctggctgcc gtcgtgccac acccgtgaca gcaccacgcc
     1501 catgtcgcgc aattcatcca ggtcgcgcag cctggcgccc accaccgacg gattgcggat
     1561 ctcgacgttg actgtctcca aagcgcagaa ggtcttctcg cgctcggcgt cgaactgctt
     1621 ggcggccgac accgggtcga gcttgaacac cgcccgcacc gccagcatgg acagcaggat
     1681 gccgacgatg ccgaaggggt aggccacggc ataggcttgg ccggtgaccg cgccggcgtt
     1741 ctgggcgccc aactggccca gcacttcctg gccggcggcc agcgacggcg tgttggtgac
     1801 cgcgcccgac agcatgccca gcaccgccgg cagttcgatg ccggtcagca ggtggatcgc
     1861 caccgccgtc agggtgccca gcaccacgat ggacaccgcc atggcgttca tggcgaggcc
     1921 gtccttccgg aaggcctgga agaagccggg gccgaccgcg acgccgatcg agtagacgaa
     1981 cagcaccagc ccgaactcgc gggcgaactg cagcatgtcg gcatccatgt ggacgccgaa
     2041 atggccgaac gcgatgccgg caaacagcac gccgccgaca ccaagacgga cgccgagtat
     2101 cttggcctgg ccaaaaagca ggcccagcgc ggcggtgccg gacaacacca gcagcgcctg
     2161 ggcgacgcca tgcaattcca tcggggctcc ccttttaggt agcttacgac cgctaggggt
     2221 actcccttcg ggatgaaaga caagggaaaa ggccatgaca gggccgcatg cgcgggcgga
     2281 ccaccccgcc cgcgcgccgg ccggtcagcg cttcatcgac ttggcggtgc g
//
LOCUS       DATIKR010000783         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_241417, whole genome shotgun sequence.
ACCESSION   DATIKR010000783 DATIKR010000000
VERSION     DATIKR010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241417"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            403..600
                     /locus_tag="VLL76_12345"
     CDS             403..600
                     /locus_tag="VLL76_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30343.1"
                     /translation="MNDSFSEHGKDKSEAPIRLLVLGAVYAGAIFFAVAFSPAIGFVN
                     PTPGGETGKIASAEAPSRSGQ"
     gene            complement(651..1607)
                     /locus_tag="VLL76_12350"
     CDS             complement(651..1607)
                     /locus_tag="VLL76_12350"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HSV30344.1"
                     /translation="MSAAPSLIADIGGTNVRFALVGEDGRPQLVQAMRCADFAGPAEA
                     ARAYLSAAAAGINPRRAAFAVASPVTGDRVDLTNSAWDFSIEAVRRDLGADSLEVVND
                     FTAVALSVRHLGADDRVRVGGGEAAPGAPVAVLGPGTGLGVSALVPDKAGTWVALATE
                     GGHITMAAADDREAAILSILRARFGHVSAERVLSGPGLVNLYEALAAVLRRPVHYTTP
                     DAISQRGLDGSCPLCRETLDTFFAMLGTVAGNLALSVGARGGVYLAGGILPRMRDAFV
                     RSAFRTRFEDKGRFNAYLEPIPVWLITHPQPAFAGLAGLVRG"
BASE COUNT          302 a          582 c          552 g          238 t
ORIGIN      
        1 cgatcaggcc acgcttcatc agatgcttga ccgcgtcggc cgggcagccg cacaggacgc
       61 gcagattggc ctgcggcgcc tcgacccacc aaacgccggc cgtgacctcg atcttacgca
      121 aagactgcat actctggtgg ctcccccgaa ccctgccggc gcatcgcata cgaatggatg
      181 caaccgaaag gaacggtagc atgcttctgg aaccgacacc agacttgcac tgcttctaaa
      241 ataaggctat taccctacgg cccacccgcc tcgggtgggc ttttcccact ccgttgagtg
      301 gctcgccatt caccggacat ttaaaaagca ttgactccgc gatcacccct acctataccg
      361 tcgcataagc gacttaccct ttcggttaag agagatcggg cgatgaacga cagcttctcg
      421 gagcacggca aggacaagag cgaggcgcca atccgccttc tggtgctggg agccgtctat
      481 gccggcgcca tcttcttcgc cgtcgccttc tcgccggcca tcggcttcgt caatccgacg
      541 ccgggcggcg aaaccggcaa gatcgcctcg gccgaagcgc ccagccgcag cggccagtaa
      601 gccgcgaggc ttctgcaaac ccccggcagg cccgggggtt ttttgttgcc ttacccccgc
      661 accaatcccg ccaagccggc gaaggccggc tggggatggg tgatcagcca taccgggatg
      721 ggctccagat aggcgttgaa gcggcccttg tcctcgaagc gggtgcggaa cgccgagcgg
      781 acgaaggcgt cgcgcatgcg cggcaggatg ccgccggcca gatagacgcc gccgcgggca
      841 ccgaccgaca gcgccaggtt gccggccacc gttcccagca tggcgaagaa ggtatcgagc
      901 gtctcgcggc acagcgggca cgatccgtcc aagccgcgct gtgagatggc gtcgggggtg
      961 gtgtagtgca ccggccgccg cagcaccgcc gccaacgcct cgtacagatt gaccagtccg
     1021 gggccggaca gcacgcgttc ggccgagacg tggccgaagc gggcgcgcag gatcgacaga
     1081 atggcggcct cgcggtcgtc ggcggcggcc atggtgatgt ggccgccctc ggtcgccagc
     1141 gcgacccaag tgccggcctt gtcgggcacc agcgccgaaa cccccagccc ggtccccggc
     1201 cccagcaccg ccaccggggc gcccggtgcg gcctcaccgc cgcccacacg gacacggtcg
     1261 tcggcgccaa gatgccgcac cgacagggcg acggcggtaa agtcgttgac gacctccagg
     1321 ctgtcggcgc cgaggtcgcg gcgtaccgcc tcgatcgaga agtcccaggc cgaattggtg
     1381 agatcgacgc gatccccggt caccgggctt gccaccgcga aggcggcgcg gcggggattg
     1441 atgccggcgg ctgccgccga cagataggcc cgggcggctt cagccgggcc ggcgaagtcg
     1501 gcacagcgca tggcctgcac caattgcggc cggccgtcct cgcccaccag ggcgaagcgg
     1561 acattggtgc cgccgatgtc ggcgatcagc gaaggagcag cggacatggc gggacctatt
     1621 agcggcggcg cagcgactga tacagctcga tgtagcgcgc cgccgagcgg atcc
//
LOCUS       DATIKR010000784         3025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_35041, whole genome shotgun sequence.
ACCESSION   DATIKR010000784 DATIKR010000000
VERSION     DATIKR010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35041"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VLL76_12355"
     CDS             complement(<1..619)
                     /locus_tag="VLL76_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30345.1"
                     /translation="MTEPARRAPDWYADFAAEPAARLDALLRRHETVPGLDRYDPHDA
                     IAILFQGRTGDDPLVLALDQALADWIAARLTQSPAAAKRVGALAADMTEAVSLAPRLP
                     LPLSRRLLCDRFAELDTWTWMVSGDGRDVRRHYWLALAGSQVNNRFVGHWLRVCDAVG
                     RGEFPQSYLSIALQGLRGLPRRSLDLPDEVLAGLARWARHLSATPE"
     gene            complement(612..1610)
                     /locus_tag="VLL76_12360"
     CDS             complement(612..1610)
                     /locus_tag="VLL76_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30346.1"
                     /translation="MIFQTDFVVNDVKRLCDDRKDARHRAWGDNLKYDGRVAPERAAA
                     WEGEINEIAGDQGLQTIPQAFAEWFKETKRDLSSGTAAPAFAADNHLARQSVPAGTVR
                     FVRVEDLSTWLDKFKITEARFLEAFAIAKGSVAADDEVKQQSVALIADLVRQWNDARD
                     NRPAFGAFHDGIAKEVADDAWHHALRDRLGLGHYGLRRPDGSRRAPFLVGLMEVPIVD
                     IIKALPPAECDFAFAAPTILDGSGLSEYFFPTPGPNYAGEVSYGRVVDLQGRADRLVN
                     EILHRPIAYKPEHLVKVARIEVDMPDLPLWEIRNRHLRLLRSEVGDGFAAEMTADD"
     gene            complement(1669..2499)
                     /gene="tatC"
                     /locus_tag="VLL76_12365"
     CDS             complement(1669..2499)
                     /gene="tatC"
                     /locus_tag="VLL76_12365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HSV30347.1"
                     /translation="MSKQTEIDDKSMPLLDHLVELRRRLLWSVLAFIIVFAACFAFAA
                     DIYNFLLDPYAKVALEKGGMRRLIYTAPTEAFFTYVKVSAFAAAVVCFPVWAGQLWAF
                     VAPGLYKHERKAFLPFLFATPILFTMGAALVYFLVLPMLYTYLLGFENLIPQQGELPI
                     QLEAKVSESLALIMTLVFAFGLAFQMPVLLTLLARVGIVTAKGLAEKRRYAIVAVFVF
                     AAIVTPPDVVSQLSLAIPMVILYELSIISAKMAEKKRGAEEEDEDDEEEVVEETDFNG
                     "
     gene            complement(2496..2858)
                     /gene="tatB"
                     /locus_tag="VLL76_12370"
     CDS             complement(2496..2858)
                     /gene="tatB"
                     /locus_tag="VLL76_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HSV30348.1"
                     /translation="MFDIGWDEMALVAVIALIVIGPKDLPHVLRAAGHWVRKARDMAG
                     EFQRGVDDMVREADLHELRQQVEKVGDTNALKRQIEATIDPTGDIARSLEAPKMDEPA
                     PAEDKPAEPPQPTRPPEP"
BASE COUNT          497 a          983 c         1043 g          502 t
ORIGIN      
        1 tctcgggcgt tgccgacagg tggcgggccc agcgggcaag tccggccagc acctcgtcgg
       61 gcaggtcgag gctccggcgc ggcaggccgc gcaggccctg gagggcgatg gacagatagg
      121 attgcgggaa ctcgccccgc cccacggcgt cgcacacccg cagccaatgg ccgacgaagc
      181 ggttgttgac ctgcgatccg gccagggcca gccaataatg gcgccgcacg tcacggccgt
      241 cgccggacac catccaggtc cacgtatcca gttccgcgaa gcggtcgcac aacaggcggc
      301 gcgaaagcgg cagcggcagc ctgggcgcca gcgacaccgc ctcggtcatg tcggcggcca
      361 atgccccgac cctcttggcg gcggcgggcg actgggtcag gcgggcggcg atccagtccg
      421 ccagcgcctg atcgagcgcc aacaccagcg gatcgtcgcc ggtgcggccc tggaaaagga
      481 tggcgatggc gtcgtgggga tcatagcggt cgagccccgg caccgtttca tgccggcgca
      541 gcagggcgtc gaggcgcgcc gccggctcgg cggcgaaatc ggcataccag tcgggcgcgc
      601 ggcgggccgg ttcagtcatc ggcggtcatc tcggcggcga acccgtcccc aacctcggag
      661 cgcagcaggc gcaggtggcg attgcggatc tcccacaacg ggaggtccgg catgtccacc
      721 tcgatgcgcg ccaccttcac caggtgttcc ggcttgtacg cgatgggccg gtgcaggatt
      781 tcgttcacca ggcggtccgc cctgccctgc aaatcgacga ctcggccgta gcttacctct
      841 ccggcgtaat tgggtccagg ggtcgggaag aagtattccg agaggccgga gccatccaga
      901 atggtgggtg ccgcgaaggc gaagtcgcac tcggccgggg gaagcgcctt gatgatatcc
      961 acaatcggca cctccatcag gccgaccagg aaaggcgccc gtcggctgcc atcgggccgt
     1021 cgaaggccgt aatggccgag gcccaggcgg tcgcgcaagg cgtggtgcca ggcgtcgtcg
     1081 gcgacttcct tggcgatgcc gtcgtggaag gctccgaacg cggggcggtt gtcgcgggcg
     1141 tcgttccatt gccgcacgag gtcggcgatc agcgcgacgg actgttgctt cacctcgtcg
     1201 tcggcagcca cgcttccctt ggcgatggcg aacgcctcga ggaaccgggc ttcggtgatc
     1261 ttgaacttgt cgagccaagt ggacaggtcc tcgacgcgca cgaaacgcac cgttcccgcc
     1321 ggaaccgatt gacgggccag atgattgtcg gcggcgaagg cgggcgcggc cgtgccgctg
     1381 gaaaggtcgc gcttggtttc cttgaaccat tcggcgaagg cttgcggaat ggtttgcagg
     1441 ccctggtcgc cggcgatctc gttgatctcg ccttcccagg cggcggcccg ctcgggcgcc
     1501 acgcgcccgt cgtatttcag attgtcgccc caggcgcggt gacgggcgtc cttgcggtca
     1561 tcgcaaagcc gtttgacgtc gttcaccacg aaatcagtct ggaagatcac aggccaaccc
     1621 cacacacccc tttccgtcta ccacttccgg agggatttgc aagaggcttc acccgttgaa
     1681 gtcagtctcc tcgacgacct cttcctcgtc gtcctcgtcc tcttcctcgg cgccgcgctt
     1741 cttctcggcc atcttggcgg agatgatgga cagttcgtag aggatgacca tgggaatcgc
     1801 cagggacagt tggctcacca cgtcgggcgg ggtgacgatg gcggcgaaga cgaagacggc
     1861 gacgatggcg tagcggcgct tttccgccag gcccttggcg gtgacgatgc cgacgcgggc
     1921 cagcagggtc agcagcaccg gcatctggaa ggccaggccg aaggcgaaca ccagggtcat
     1981 gatcagggcc agcgattcgc ttaccttggc ttccaactgg atcggcagtt cgccctgctg
     2041 cgggatcaga ttctcgaagc ccagcaggta ggtgtacagc atgggcagga cgaggaaata
     2101 gaccagcgcc gcgcccatgg tgaacaggat cggggtggcg aacaggaacg gcaggaaggc
     2161 cttgcgctcg tgcttgtaca ggcccggcgc gacgaaagcc cacaactgcc cggcccagac
     2221 cgggaagcag accaccgccg ccgcgaaggc cgacaccttg acataggtga agaacgcctc
     2281 ggtcggcgcg gtatagatca ggcgccgcat gccgcccttc tccagcgcca ccttggcgta
     2341 gggatcgagc aggaaattgt agatgtcggc ggcgaaggcg aagcaggcgg cgaacacgat
     2401 gatgaaggcc agcaccgacc acagcaggcg gcggcgcaac tcgaccagat ggtcgagcag
     2461 cggcatgctc ttgtcgtcga tctcggtctg cttgctcacg gctcgggcgg cctggtcggt
     2521 tgcgggggtt cggccggctt gtcctcggcg ggggccggct cgtccatctt cggggcctca
     2581 agcgaacggg cgatgtcgcc ggtggggtcg atggtcgcct cgatctggcg cttcagggcg
     2641 ttggtgtcgc ccaccttctc gacctgctgc ctgagttcgt gcaggtcggc ctcgcgcacc
     2701 atgtcgtcga cgccgcgctg gaactcgccc gccatgtcgc gcgccttgcg cacccaatgg
     2761 ccggcggcac gcaggacgtg cggcaggtcc ttggggccga tcacgatcaa cgcgatcacg
     2821 gccaccagag ccatttcgtc ccagccgatg tcgaacatgc cggatcagtc tctcttgagg
     2881 cccgaaggat cgggcgtcag tgcttggccg tgtccttctc ggccgccttg gcggtcgatt
     2941 gggcgtcgat ctgcgactgc gactgggcgg cgggcgcctc gtcgtcctcg ttcaggccct
     3001 tcttgaaggc cttcacgccc ttggc
//
LOCUS       DATIKR010000785         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_169168, whole genome shotgun sequence.
ACCESSION   DATIKR010000785 DATIKR010000000
VERSION     DATIKR010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169168"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VLL76_12375"
     CDS             <1..368
                     /locus_tag="VLL76_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV30349.1"
                     /translation="SFFADVPERMAGCHLAIARSGASTVAELTNLGRPAILVPYPHAI
                     DDHQTANARAVDEAGGAWLMPQPAFTAEALASRLESLFTQPGTLARAADCARAASRPD
                     AADRLADLAASLPAKESLS"
     gene            365..1789
                     /gene="murC"
                     /locus_tag="VLL76_12380"
     CDS             365..1789
                     /gene="murC"
                     /locus_tag="VLL76_12380"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HSV30350.1"
                     /translation="MRTMPLSIGTIHFVGIGGIGMSGIAEILHNLGYTVQGSDIADNY
                     NVERLRKKGMKIAIGHVAENLGDARVVVISSAVKADNPEVTAARAKMVPVVRRAEMLA
                     ELMRLKNAIAIGGTHGKTTTTSLIAALLDTAQMDPTVINGGIINAYGTNARLGASEWM
                     VVEADESDGSFTKLPSTAVIVTNIDPEHMDHYGSFDRLRDAFRTFVENIPFYGFAACC
                     IDHPEVQALIARVPDRKIVTYGFSPQAMVRATNLRIGAGGARYDVVITDRVTGQTRTI
                     DDLRLPMYGEHNVLNSLATVCVANELGLPNDIVRKALGGFAGVKRRFTKTGETRGVTV
                     IDDYGHHPVEIAAVLKAARSACTGHVVAVVQPHRYTRLHSLFGEFCTCFNDADTVIVA
                     DVYAAGEQPIEGADRDGLVKGLQEHGHRHVLALPDQQALAAMVNDITRSGDMVVCLGA
                     GNITAWAHALPGELDALPAREAGE"
BASE COUNT          316 a          729 c          596 g          282 t
ORIGIN      
        1 acagcttctt cgccgacgtg cccgagcgca tggccggctg ccacctcgcc atcgcgcggt
       61 cgggcgcctc gaccgtggcg gaactgacca atctggggcg gcccgccata ttggtgcctt
      121 atccccatgc cattgacgac caccagacgg ccaacgcccg cgcggtggac gaagccggcg
      181 gcgcctggct gatgccgcag ccggccttca ccgccgaggc tttggcgtcg cgtctggaat
      241 ccctgttcac ccagccgggc accctggcgc gggcggccga ttgcgcgcgg gcggcctcgc
      301 ggcccgatgc cgccgaccgt ctcgccgatc tggccgccag cctgcccgcc aaggagtctc
      361 tgtcatgagg acgatgccgc tctccatcgg caccatccat ttcgtcggca tcggcggcat
      421 cggcatgtcc ggcatcgccg agatcctgca caacctgggc tacacggtcc aaggctcgga
      481 catcgccgac aactacaatg tcgagcggct gcgcaagaag ggcatgaaga tcgccatcgg
      541 ccacgtagcc gagaatctgg gcgacgcccg cgtggtggtc atctcgtcgg cggtcaaggc
      601 cgacaacccc gaggtcaccg ccgcccgcgc caagatggtg ccggtggtgc gccgcgccga
      661 gatgctggcc gaactgatgc gcctcaagaa cgccatcgcc atcggcggca cccacggcaa
      721 gaccaccacc acctcgctga tcgcggccct gctggacacc gcccagatgg accccaccgt
      781 catcaacggc ggcatcatca acgcctatgg caccaacgcc cgcctgggcg ccagcgaatg
      841 gatggtggtc gaggccgacg aatccgacgg cagcttcacc aagctgccgt cgacggcggt
      901 gatcgtcacc aacatcgacc ccgagcacat ggaccattac gggtcgttcg accgcctgcg
      961 cgacgccttc cgcaccttcg tcgagaacat cccgttctat ggcttcgccg cctgctgcat
     1021 cgaccatccc gaggtccagg cgctgatcgc ccgcgtgccc gaccgcaaga tcgtcaccta
     1081 cggcttcagc ccccaggcca tggtgcgcgc caccaacctg cgcatcggcg ccggcggcgc
     1141 ccgctatgac gtggtcatca ccgaccgcgt caccggccag acccgcacca tcgacgatct
     1201 gcgcctgccc atgtacggcg agcacaacgt gctcaactcg ctggccaccg tctgcgtcgc
     1261 caacgaactg ggcctgccca acgacatcgt gcgcaaggcg ctgggcggtt tcgccggcgt
     1321 caagcgccgc ttcaccaaga ccggcgagac ccggggcgtc accgtgatcg acgattacgg
     1381 ccaccacccg gtcgagatcg ccgccgtgct caaggccgcc cgttccgcct gcaccggcca
     1441 tgtggtggcg gtagtgcagc cgcaccgcta cacccgcctg cacagcctgt tcggcgagtt
     1501 ctgcacctgc ttcaacgacg ccgacaccgt gatcgtggcc gacgtctacg ccgccggcga
     1561 gcagcccatc gagggcgccg accgcgacgg cctggtcaag ggcctgcagg agcacggcca
     1621 ccgccacgtc ctggcgctgc ccgaccagca ggcgctggcc gccatggtca acgacatcac
     1681 ccgctcgggc gacatggtgg tctgcctggg tgccggcaac atcaccgcct gggcgcatgc
     1741 cctgccgggc gaactggatg cccttcctgc gcgggaggcc ggcgaatgat gcggctccgc
     1801 acctccatcg tcattcccgc gcaggcggga atccatggct gccacctgac ggctgctggc
     1861 atggaccccc gccttcgcgg gggtgacgca atcgaattgg aggccggcga atgatggccg
     1921 tcc
//
LOCUS       DATIKR010000786         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_23685, whole genome shotgun sequence.
ACCESSION   DATIKR010000786 DATIKR010000000
VERSION     DATIKR010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23685"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VLL76_12385"
     CDS             complement(<1..766)
                     /locus_tag="VLL76_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HSV30351.1"
                     /translation="MLDVRPVIFVNGFLLLVLAAAMCVPAAVDLLYDDTDWKVFAASA
                     LVTAFVALAMVFGAKPEGKFDMSTRQAFLLTTSVWVLAAGFGALPFAFSALKVSYTDA
                     YFEAMSGLTTTGSTILVGLDSMPHGILLWRSLLHWLGGIGIIVMAVAILPILRIGGMQ
                     LFKMESSDKTDKVKPRVSQIAGGITTVYVGFTIVCGILLWLAGMTPFEAVNHAMATLS
                     TGGFSTSDSSAGKWTSPLIHWILSVFMAIGGATFVLF"
     gene            846..>1575
                     /locus_tag="VLL76_12390"
     CDS             846..>1575
                     /locus_tag="VLL76_12390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV30352.1"
                     /translation="MTGPAYLPLSRDGRLAARAREALARLSSCVLCARRCGADRTQGI
                     RRASCRIGRHAIVHSVGPYDGGGGAIVFAGCNMRCLFCDIAEASWDGKGEEADAESLA
                     GHMLALQQRGHRCIALVSPSHVAAQIVEAVAIAAQRGLTVPLAWDSGGYDSPEGLALM
                     DGVVDFYLPDAKFGDSTVARQLAGVTGYVDANRAAIAEMLRQVGPGGVLVRHLRLPHG
                     LAGTEAVLAGLPEGVAVEVRDDYRP"
BASE COUNT          271 a          515 c          559 g          230 t
ORIGIN      
        1 tgaacagcac gaaggtggcg ccgccgatgg ccatgaacac cgacaggatc cagtggatca
       61 gcgggctggt ccatttgccg gcagaggaat ccgaggtcga gaagccgccg gtggacaggg
      121 tcgccatggc gtggttgacc gcctcgaacg gagtcatgcc ggccagccac agcaggatgc
      181 cgcagacgat ggtgaagccg acgtagacgg tggtgatgcc gccggcgatc tgcgacacgc
      241 gcggcttcac cttgtcggtc ttgtccgacg attccatctt gaacaactgc atgccgccga
      301 tgcgcaggat cggcaggatc gccaccgcca tcacgatgat gccgatgccg cccagccaat
      361 gcagcagcga ccgccacagc aggatgccgt gcggcatgga atcgaggccc accaggatgg
      421 tcgagccggt ggtggtcagg cccgacatgg cctcgaaata ggcgtcggta taactgacct
      481 tgagggccga gaacgcgaac ggcagggcac cgaatcccgc cgccagcacc cacaccgagg
      541 tggtgagcag gaaggcctgg cgggtcgaca tgtcgaactt gccctcgggc ttggcgccga
      601 acaccatggc cagggcgacg aaggcggtca ccagcgccga ggcggcgaac accttccaat
      661 cggtgtcgtc atacaacagg tccaccgccg ccggcacgca catggcggcg gcgagcacaa
      721 gcagcaggaa gccgttgacg aagatgaccg gccgaacgtc gagcaagcgt ggaatacccc
      781 cctgtcggcc aagactattg gcgccgtccg gcgacagagt ccagtgaatc gtgtagcctg
      841 tggcgatgac ggggcccgct tatcttccgc tctcccgcga cggccgactt gccgcccgcg
      901 cccgcgaggc gttggcgcgg ctgtcgtcct gcgtgctgtg cgcgcggcgt tgcggcgccg
      961 accgcacgca agggatccgg cgcgcctcgt gccgcatcgg ccgccacgca atcgtccatt
     1021 cagtcggacc gtatgacggc ggcggcgggg ccatcgtgtt cgccggctgc aacatgcgct
     1081 gcctgttttg cgacatcgcc gaggccagtt gggacggcaa gggcgaagag gcggatgccg
     1141 aatccctggc cggccacatg ctggcgctgc agcagcgcgg ccaccgctgc atcgcgctgg
     1201 tcagccccag ccacgtggcg gcgcagatcg tcgaggcggt ggcaatcgcc gcccaacgcg
     1261 gattgacggt gccgctggcg tgggattcgg gcggctatga ttcgcccgag gggctggcgc
     1321 tgatggacgg ggtggtggat ttctatctgc ccgacgccaa gttcggcgat tcgacggtgg
     1381 cgcgccaact ggccggagtg accggctatg ttgacgctaa ccgcgccgcc atcgccgaga
     1441 tgctgcgcca ggtcgggccg ggcggagtgc tggtgcgcca cctgcggctg ccccacggcc
     1501 tggccggcac cgaggcggtc ctggccggcc tgcccgaggg cgtggcggtc gaggtcaggg
     1561 acgactaccg cccct
//
LOCUS       DATIKR010000787         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_132737, whole genome shotgun sequence.
ACCESSION   DATIKR010000787 DATIKR010000000
VERSION     DATIKR010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132737"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /locus_tag="VLL76_12395"
     CDS             <1..1296
                     /locus_tag="VLL76_12395"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV30353.1"
                     /translation="GQILFVGSSAKGLLDLRATPLDPVVPGVELHAQVVEQLVLDQTL
                     LRPDWTLGAELLYILVLGVLLLVLIEWIGALWAALVGSLFLASALGLSWTAYAQARWL
                     LDPIFPMVSLLMVYLTASTLKFMHGEHERRFVRGAFSRYLSPALVEKLADSRAGLTLG
                     GEMRNMTLLFCDVRGFTTISEQFDPQGLTHLINSFLTPMTGIILKTGGTIDKYIGDCI
                     MAFWNAPLDDPEHARHGCLGALKMMDYLPVLNEQLRQEAEVAGRKHIPLAIGIGLNSG
                     DCCVGNMGSDQRFDYSVLGDTVNLASRLEGQSKPYGVYIVISEETHRQAPELAALELD
                     LIRVKGKTQPVRIMTLLGDADMAQSAHFAAWKQAHDRLIACYRAQDWDGATQALEEAR
                     VHADGRIPNFYKLYEERIAAYRAAPPPTDWDGVFTATSK"
     gene            complement(1510..>2505)
                     /locus_tag="VLL76_12400"
     CDS             complement(1510..>2505)
                     /locus_tag="VLL76_12400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30354.1"
                     /translation="NKESWFSESAGTYTQNFHQDNAPEAAIGVATPAGLGTTRVYGNW
                     HGYAAGAMDSYQVVGTDQYNSPTTQMVISEGPADGNFANGVQLNTNLSANQIDGNVTV
                     KTEGNVTHEYFVGGADSSTLSRSSYIDDKTYAAVEAESTSQINTSAASDTKLFLVSAS
                     SVPNTGYALVNNPYMTWGWWSSEAKDSSGNLHQIHLANYVAGVRSALDLSTQGTISHS
                     GAAVGSLIQTNGAVSIASGGYMQQFDFGTRTGTWDVINFGGYNFGGTLAGKVGPNAQP
                     DFTGIANTGNAASGTINGSFYISGTSPVGNVGGAFAATMTDGTKAAGVFGGAKVP"
BASE COUNT          407 a          806 c          824 g          468 t
ORIGIN      
        1 ggccagatcc tgttcgtcgg ctccagcgcc aagggcctgc tcgaccttcg ggcgacgccg
       61 ctcgaccccg tcgtccccgg tgtcgagctg catgcccagg tggtcgagca attggtgctg
      121 gaccagacgc tgctgcgccc cgactggacg ctgggcgccg agcttctcta catcctggtg
      181 ctgggcgtgc tgctgctggt gctgatcgag tggattggcg cgttgtgggc ggccctggtc
      241 ggcagcctgt tcctggcgtc ggccctgggg ctgtcgtgga ccgcctatgc ccaggcgcgc
      301 tggctgctcg accccatctt ccccatggtg tcgctgctga tggtctacct gaccgcctcg
      361 accctgaaat tcatgcatgg cgagcacgag cgccgcttcg tgcgcggcgc cttctcgcgc
      421 tatctgtcgc cggccctggt cgaaaagctg gccgattcgc gggccggcct gaccctgggc
      481 ggcgaaatgc gcaacatgac gctgctgttc tgtgatgtgc gcggcttcac caccatctcc
      541 gagcagttcg atccgcaggg cctgacccac ctgatcaaca gcttcctgac gccgatgacg
      601 ggcatcatcc tcaagaccgg cggcaccatc gacaagtata tcggcgactg catcatggcg
      661 ttctggaacg cgccgctgga cgaccccgag catgcccgcc acggctgcct gggcgcgctg
      721 aagatgatgg attacctgcc ggtgctgaac gagcaactgc gccaggaagc cgaggtcgcg
      781 gggcgcaagc acatcccgct cgccatcggc atcggcctca attccggcga ttgctgcgtc
      841 ggcaacatgg gctcggacca gcggttcgac tattcggtgc tgggcgacac cgtcaacctg
      901 gcgtcacgcc tggagggcca gagcaagccc tatggcgtct acatcgtcat ttccgaggaa
      961 acccaccgcc aggcgcctga gctggcggcg ctcgagctcg acctgatccg ggtcaagggc
     1021 aagacccagc cggtccgcat catgaccctg ctgggcgatg ccgacatggc ccagtcggcc
     1081 catttcgccg cctggaagca ggcccacgac cgcttgatcg cctgctatcg cgcccaggac
     1141 tgggatggcg ccacccaggc gctggaggaa gcgcgcgtcc acgccgacgg ccgcatcccc
     1201 aatttctaca agctctacga ggaacgcatc gccgcctatc gcgcggcgcc gccgcccacc
     1261 gactgggacg gcgtgttcac cgccaccagc aagtaggcgc ggagatcagc ggggagttta
     1321 tcgctcgtct tgcgcgggct tgacatacaa catcgtcatg gccgtgcttg acacggccat
     1381 ccacgcggct ccgcctaagg gagtgatgtc agcggggaac tcgcggctgc cacgcggatc
     1441 gccgggtcga gcccggcgat gacgggatgg tgggcaggca gcgaacgcgc gccgggatga
     1501 cgatttgact caaggcacct tggcgccacc gaacacgccc gccgccttgg tgccatcggt
     1561 catggtcgcg gcaaaggcgc cgccgacatt gcccaccggg ctggtcccgg agatatagaa
     1621 cgagccgttg atggtgcccg aggccgcgtt accggtgttc gcgatgccgg tgaaatcggg
     1681 ctgggcgttg ggaccgacct tgccggccag cgtgccgccg aagttgtagc cgccgaagtt
     1741 gatgacgtcc caggtgcctg tgcgcgtacc gaaatcgaac tgctgcatgt agccgccact
     1801 ggcgatcgac accgcgccgt tggtctggat caacgacccg acggcggcgc cggaatggct
     1861 gatggtgccc tgggtcgaca aatcgagcgc cgagcgcacg ccggccacgt aattggcgag
     1921 atggatctgg tgcaggttac ccgaggaatc cttggcctcc gacgaccacc agccccaggt
     1981 catgtacggg ttgttcacca aggcgtagcc ggtgttgggg accgagctgg ccgaaaccag
     2041 gaacagcttg gtgtcgctgg ccgccgacgt gttgatctgc gaggtgcttt ccgcttcgac
     2101 ggccgcgtat gtcttgtcgt cgatatatga actgcgggac agggtagacg aatcggcgcc
     2161 accgacgaag tattcgtggg taacgttgcc ctctgtcttg accgtgacgt taccatcaat
     2221 ctggtttgcg cttaagttgg tgttaagctg gacgccgttg gcgaagttgc cgtcggccgg
     2281 gccttcgctg atcaccatct gggtggtcgg actgttgtac tgatcagtgc ccacgacctg
     2341 atagctgtcc atggcgccgg cggcatagcc gtgccagttg ccgtagacac gggtcgtgcc
     2401 gagtccggcc ggtgtagcca cgccgatggc ggcttccggg gcattgtcct ggtggaagtt
     2461 ttgagtgtag gtgccggcac tctcggagaa ccagctttcc ttgtt
//
LOCUS       DATIKR010000788         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_11913, whole genome shotgun sequence.
ACCESSION   DATIKR010000788 DATIKR010000000
VERSION     DATIKR010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11913"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1229)
                     /locus_tag="VLL76_12405"
     CDS             complement(24..1229)
                     /locus_tag="VLL76_12405"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HSV30355.1"
                     /translation="MRRLPTLLALLCIIAFPARSAPTLLAVDEDTGAVLYQQDATQPR
                     HPASLTKMMTVYVAFAAIRAGQADFDQRVTVSPGAAAEGGSVLGLKAGTTLTLRDALL
                     AVVVRSANDAAVAVAEHLAGSEEAFALRMTETARRLGMSATTFRNATGLTVEGHVTTA
                     RDIALLGLALRRDFPDLYPLFSRRAMAWRGGSLPSVNAFLAQPGAEGLKTGFTCPAGY
                     NLVAAARRNGRAVLAVVMGAPSRDERLRLAADLVNRAVAGKLSPSGSLAALTVAAGLP
                     PDYTAIACPGGRSGGGPAVIEAVMPSGWAIDLGLAATPAQAAAKARAVQAKRPALRRG
                     TVVTLAKAAGGVVRWRALVAGLDQQAAVPTCLAIRTEADTACLVLSPAMAAGAADEAR
                     RLKRASARD"
     gene            1358..1591
                     /locus_tag="VLL76_12410"
     CDS             1358..1591
                     /locus_tag="VLL76_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HSV30356.1"
                     /translation="MDEIDFATERAEAFTRVALNAVLARVGEAGPSSGICRSCREPIE
                     AERLRANQHARLCRECAAEEEAHSQRARRCGPR"
     gene            1687..>2106
                     /locus_tag="VLL76_12415"
     CDS             1687..>2106
                     /locus_tag="VLL76_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSV30357.1"
                     /translation="MDTVPVETDEITVREPTKGEVPFYKEHGKTHPRSVKGRFRTLKW
                     WALAILLGWWHFAPFLRWDRGPGAPDQAILIDMAGRRAYFFDIEIWPQEIYYITGILA
                     LSAVTLFLMSALAGRVWCGFLCWQTVYTDLFIWIESKI"
BASE COUNT          339 a          700 c          760 g          307 t
ORIGIN      
        1 gccaccggcg attggatgat ggcttaatcc ctggcgctgg cccgcttcag gcggcgggcc
       61 tcgtcggcgg cgcccgccgc catggcgggc gacaggacca ggcaggcggt gtcggcctcg
      121 gtgcgtatag ccaggcaggt cggcaccgcc gcttgctggt ccaatccggc caccaacgcc
      181 cgccagcgca ccacgccgcc cgccgccttc gccagggtca caacggttcc acgccgcaaa
      241 gcggggcgct tggcctgaac ggcgcgcgcc ttggcggcgg cctgggccgg cgtcgcggcc
      301 agccccaaat cgatggccca acccgacggc atgacggcct cgataaccgc ggggccgccg
      361 ccgctacggc cgccggggca ggcgatggcg gtgtaatcgg gcggcaagcc ggccgccacc
      421 gttagggccg ccagcgagcc gctgggcgac agcttgccgg cgacggcgcg gttgaccagg
      481 tcggcggcca gacgcaggcg ctcgtcgcgg ctgggcgctc ccatcaccac cgccagcacc
      541 gcccggccgt tgcgccgcgc cgccgccacc agattgtagc cggcggggca ggtgaagccg
      601 gtcttcagcc cctcggcgcc gggctgggcc aggaaggcgt tgacactggg caggctgccg
      661 ccgcgccagg ccatggcacg acgcgagaac agcggataca gatcggggaa gtcgcggcgc
      721 agcgccaggc ccagcagggc gatgtcgcgg gcggtggtga catggccctc gacggtcaag
      781 ccggtggcgt tgcggaaggt ggtggcggac atgcccagcc gccgcgccgt ctcggtcatg
      841 cgcagggcga aggcttcctc gctgccggca aggtgctcgg ccaccgccac cgccgcgtcg
      901 ttggccgaac gcaccaccac cgccagcaaa gcgtcgcgca gggtcagcgt ggtgccggcc
      961 ttcagcccca gcaccgaacc gccttcggcg gcggcgcccg gcgacaccgt gacgcgctgg
     1021 tcgaaatcgg cctggccggc gcggatggcg gcgaaggcga cgtagaccgt catcatcttg
     1081 gtcagcgacg ccgggtggcg cggctgggtg gcgtcctgct ggtacagcac cgcgccggta
     1141 tcctcgtcca ccgcaagcag ggtgggggcg gagcgggccg gaaaggcgat gatgcaaagg
     1201 agggcgagca gggtgggcag tcggcgcatg cgccggatgg taactgcaac cataatgtca
     1261 tcgcaacata agggttgcat cctgtatcaa tgattggcac aaaatattgt atcgcgtggg
     1321 ggattgggct gcgcgctgtc tgtgggaggg gagaatcatg gacgaaatcg atttcgccac
     1381 cgagcgggcc gaggccttca cccgggtggc gttgaacgcg gtgttggctc gcgtcggcga
     1441 ggccgggccg tcgtcgggga tctgccgctc gtgccgcgag ccgatcgagg ccgagcgtct
     1501 gcgtgccaat cagcacgccc gcctgtgccg cgaatgcgcg gccgaggaag aagcgcacag
     1561 tcaacgggct cggcgttgcg gtccacgctg accggctctg tgacaaacgc acttataccg
     1621 caccaagcgc cctgtagaat ttaggccatc taatatgcgc ctgggggcgc agggacggag
     1681 gcggctatgg atacggtgcc ggtcgaaacc gacgagatca cggtcaggga acccaccaag
     1741 ggtgaagtgc ccttctacaa ggagcacggc aagacccacc cgcgcagcgt caagggccgc
     1801 tttcgaacgc tgaaatggtg ggcgttggcg atcctgctgg gctggtggca tttcgcgccg
     1861 ttcctgcgct gggaccgtgg ccccggtgcg cccgaccagg cgatcctgat cgacatggcc
     1921 ggccgccgcg cctatttctt cgacatcgag atctggcccc aggaaatcta ttacatcacc
     1981 ggcatcctgg cgctgtcggc ggtgaccctg ttcctgatga gcgccctggc cggccgcgtg
     2041 tggtgcggct tcctgtgctg gcagacggtc tacaccgacc tgttcatctg gatcgaaagc
     2101 aagatc
//
LOCUS       DATIKR010000789         3255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_193074, whole genome shotgun sequence.
ACCESSION   DATIKR010000789 DATIKR010000000
VERSION     DATIKR010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193074"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /gene="ribD"
                     /locus_tag="VLL76_12420"
     CDS             <1..1048
                     /gene="ribD"
                     /locus_tag="VLL76_12420"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HSV30358.1"
                     /translation="GLGTVWPNPAVGCVIVKDGRVVGRGWTQPGGRPHAETEALAMAG
                     EAARGATAYVTLEPCSHHGKTPPCAEALISAGVTRVVSAAQDPDPRVSGQGLEMLRAA
                     GIAVTTGICEAEAEELNAGFFLKVREGRPLVTLKLATTLDGRIATHGGESKWITGDAA
                     RAAGHLLRAENDVILVGSGTVLADDPELTCRLPGLGERSPVRVVVDGRLRLPLTSRLV
                     ATANEVPTWVVTLEGNDDERVEAYQDAGVDIIEVEQGADHSVDPAALMTALGESGVTR
                     VLVEGGSHLAAALLRAGLIDRMVWFRSPRLIGGDGLPAAQAFGIDHLSQTPRFARVET
                     CPVGDDVMEIYKKI"
     gene            1066..1659
                     /locus_tag="VLL76_12425"
     CDS             1066..1659
                     /locus_tag="VLL76_12425"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HSV30359.1"
                     /translation="MFTGIVTDLGEVRRVVKGAGKETRFEINTRYDTDTIEIGASIAH
                     NGVCLTIIETGKGWYAIEASAETLSKTTLGDWAEGAKVNLERAMKVGDELGGHIVSGH
                     VDGVATVVSITPENESLRFVFEAPVELAKFVAPKGSVALDGVSLTVNEVDGRRFGINV
                     IPHTQAVTTFGTYRVGSRVNMEIDMLARYVARLLERD"
     gene            1631..2782
                     /gene="ribB"
                     /locus_tag="VLL76_12430"
     CDS             1631..2782
                     /gene="ribB"
                     /locus_tag="VLL76_12430"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HSV30360.1"
                     /translation="MLPGFWKGTRAVSEYHAYLSSIEEIIEEARQGRMFILVDDEDRE
                     NEGDLVIPAQMATPDAINFMAKFGRGLICLSMARARCEELGLRPMSANNGTRMETAFT
                     VSIEAREGVTTGISAADRARTIQVAIDPSKSRHDIVTPGHVFPLQAREGGVLVRAGHT
                     EAAVDISRLAGLNPSGVICEIMNDDGTMARMPDLVKFAEHHGLKIATIADLIAYRRRH
                     DKIVRREMEAPFHSKWGGDWKMMVYVNTVAYAEHIALVKGNVTHGDGPVMVRVHAVNI
                     LDDVLGDQGSGKAGQLHAAMEMISEHGRGVVVLVREPRPTSLSDRVRAQLDQRPAPAE
                     LRDYGVGAQILLDLGVRDMILLTNTKNKTLVGLDGFGLHVVDHRSIPVA"
     gene            2794..3237
                     /gene="ribH"
                     /locus_tag="VLL76_12435"
     CDS             2794..3237
                     /gene="ribH"
                     /locus_tag="VLL76_12435"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018494155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HSV30361.1"
                     /translation="MSKTKPRVLIIEARFYDHIADMLLDGATAALDAAGVAWEKFTVP
                     GIYEIPAAIAMVLSSGKHYDGYVTLGTAIRGESDHYHYICTESMQRQSELAVAENLAL
                     GNGVLTVHDEEQALKRADPTRKNIGGLAARACLRMMELKRELKLT"
BASE COUNT          569 a         1124 c         1077 g          485 t
ORIGIN      
        1 gggcctcggc accgtatggc ccaaccctgc cgtgggttgc gtcatcgtca aggacggccg
       61 cgtggtcggc cggggctgga cgcagccggg cgggcgcccc catgccgaga ccgaagccct
      121 ggccatggcc ggcgaggccg cgcgcggcgc caccgcctac gtcaccctgg aaccctgttc
      181 ccatcacggc aagacgccgc cctgcgccga ggcgctgatc tccgccggcg tcacccgggt
      241 ggtgtcggcc gcccaggacc ccgacccgcg tgtctcgggc caggggctgg agatgctgcg
      301 ggccgccggc atcgccgtga ccactggaat atgcgaggcc gaggccgagg agctgaacgc
      361 cggtttcttc ctcaaggtgc gcgaaggccg cccgctggtg acgctcaagc tggccaccac
      421 cctggacggc cgcatcgcca cccatggcgg cgagagcaag tggatcaccg gtgacgccgc
      481 ccgcgccgcc ggccatctgc tgcgcgccga aaatgacgtc atcctggtcg gcagcggcac
      541 cgtgctggcc gacgatcccg aactgacctg ccgcctgccc ggcctgggcg agcgctcgcc
      601 ggtccgcgtg gtggtggacg gccgcctgcg cctgccgctg accagccgcc tggtcgccac
      661 cgccaacgag gtgccgacct gggtggtgac cctggaaggc aacgacgacg aacgggtcga
      721 ggcttatcag gacgccggcg tcgacatcat cgaggtggag cagggcgccg accattcggt
      781 cgatcccgcc gccctgatga ccgctttggg cgaaagcggc gtgacccgcg tgctggtcga
      841 aggcggctcg cacctggccg ccgccctgct gcgggccggc ctgatcgatc gcatggtgtg
      901 gttccgttcg ccccggctga tcggcggcga cggcctgccg gcggcccagg ccttcggcat
      961 cgaccacctt tcacagacgc cccgcttcgc gcgggtcgaa acctgtcccg tcggcgacga
     1021 cgtgatggaa atctacaaaa aaatataacg aggaggagag gcgcgatgtt caccggcatc
     1081 gttaccgatc tcggagaagt gcgccgggtg gtgaagggag cgggcaagga aacccgcttc
     1141 gagatcaata cccgttacga caccgatacc atcgagatcg gggcatccat cgcccataac
     1201 ggcgtgtgcc tgaccatcat cgagacgggc aagggctggt acgccatcga ggcgtcggcc
     1261 gagaccctgt cgaagaccac gctgggcgat tgggccgagg gtgccaaggt caaccttgaa
     1321 cgcgccatga aggtgggcga cgaactgggc ggccacatcg tgtccggcca cgtggacggc
     1381 gtcgccaccg tggtgtctat cactcccgag aacgaatcgc tgcgcttcgt cttcgaagcc
     1441 ccggtcgagc tggcgaagtt cgtcgccccg aaggggtcgg tggcgctcga tggcgtgtcg
     1501 ctgaccgtca acgaggttga cggacggcgc ttcggcatca acgtcatacc ccatacccag
     1561 gccgttacga cctttgggac ctatcgtgtg ggcagccgcg tgaacatgga aatcgacatg
     1621 ctcgcgcgct atgttgcccg gcttctggaa agggactagg gccgtgtcgg aatatcacgc
     1681 atacctgtcc tcgatcgagg aaatcatcga ggaagcccgc cagggccgca tgttcatcct
     1741 ggtcgacgac gaagaccgcg agaacgaggg cgacctggtg atcccggccc aaatggcgac
     1801 gcccgacgcc atcaacttca tggccaagtt cggccgcggc ctgatctgcc tgtccatggc
     1861 gcgcgcccgt tgcgaggagc tcggcctgcg gcccatgagc gccaacaacg gcacccgcat
     1921 ggagaccgcc ttcaccgtct cgatcgaggc gcgcgagggc gtcaccaccg gcatctcggc
     1981 cgccgaccgc gcccgcacca tccaggttgc catcgacccc agcaagtccc gccacgacat
     2041 cgtgacgccc ggccacgtct tcccgctgca ggcgcgcgag ggcggtgtgc tggtgcgcgc
     2101 cggccacacc gaggccgccg tcgacatctc gcgcctggcc gggctcaacc cgtcgggcgt
     2161 gatctgcgag atcatgaacg acgacggcac catggcccgc atgccggacc tggtgaagtt
     2221 cgccgagcat cacggcctca agatcgccac catcgccgac ctgatcgcct atcgccgccg
     2281 ccacgacaag atcgtgcgcc gcgagatgga ggcgccgttc cattccaagt ggggcggcga
     2341 ctggaagatg atggtgtacg tcaacaccgt cgcctatgcc gagcacatcg ccctggtgaa
     2401 gggcaacgtc acccacggcg acggcccggt gatggtgcgg gtgcacgccg tcaacatcct
     2461 tgacgacgtg ctgggcgacc aggggtccgg caaggccggc cagttgcacg cggccatgga
     2521 gatgatctcc gagcatggcc gcggcgtggt ggtgctggtg cgcgagcccc gtcccaccag
     2581 cctgtccgac cgcgtccgcg cccaactcga ccagcgcccg gccccggccg agctgcgcga
     2641 ttacggcgtc ggcgcccaga tcctgctgga tctcggcgtg cgcgatatga tcctgctgac
     2701 caacaccaag aacaagaccc tggtcggcct cgacggattc ggcctgcatg tggtcgatca
     2761 ccggtccata ccggtggcgt gagggaggaa gacatgtcca agaccaagcc ccgggtgctg
     2821 atcatcgagg cccggttcta cgaccacatc gccgacatgc tgctggacgg cgccaccgcc
     2881 gccctcgacg ccgccggcgt ggcgtgggag aagttcaccg tgcccggcat ttacgaaatc
     2941 ccggccgcca tcgccatggt gctgtcgtcg ggcaagcatt acgacggcta cgtcacgctg
     3001 ggcaccgcca tccgcggtga aagcgaccat taccattaca tctgcaccga aagcatgcag
     3061 cgccagtccg aactggccgt ggccgagaac ctggctttgg gcaacggcgt gctgacggtc
     3121 cacgacgagg agcaggcgct caagcgcgcc gatcccaccc gcaagaacat cggagggttg
     3181 gccgcgcgcg cctgccttcg catgatggag ctcaagcgcg agctgaaact gacctgagga
     3241 atgagcaaaa ctccc
//
LOCUS       DATIKR010000790         5491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_23827, whole genome shotgun sequence.
ACCESSION   DATIKR010000790 DATIKR010000000
VERSION     DATIKR010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5491
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23827"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1113)
                     /locus_tag="VLL76_12440"
     CDS             complement(<1..1113)
                     /locus_tag="VLL76_12440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30362.1"
                     /translation="MRVTESERAFLHELHSVKKDPLGKRIIHFFVSLAPQGGDMAKKI
                     DSAKQFIKKAFAKSPYCQVFSAHNGDIFVTYSHITVSEVLASCNRVEKLFCESAVLSA
                     RNAYNEYGFYKVADAVKDIDKVFTAFKSIIAQSQPEPDKYTKRPLSPENLSFLCEKLR
                     NADLRACIFNQPVYFIGNKVPSIEFLEFYVSTAQIESVFLPDTNILGNAWLFQALKEE
                     FDRATLRTVAKEIVDYRHKSFSVNVGLSTILGREFADFYEALPSKLAGRIVLEIHKTD
                     LVQNFNLMKDVKQLVEEKGLKLCIDGVDWRDFEILCLDKLKPNYVKVVWHNDLLSTSE
                     SELTHFVKAVKAHDACEIVLSRCDNPKAFPFARTLGV"
     gene            complement(1209..1616)
                     /locus_tag="VLL76_12445"
     CDS             complement(1209..1616)
                     /locus_tag="VLL76_12445"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin family protein"
                     /protein_id="HSV30363.1"
                     /translation="MLVWEEGYKIGQEEMDAEHLILFSILNQLNINIQNDMAGACVAD
                     VLGALGSYIDYHFAHEEALMKSWGYPGLEGHSAKHHEFMNEIARLRREADGGDMLQAG
                     LKVRAFVLDWLLSHILESDAEYAAFIAAKAKDK"
     gene            1807..2406
                     /locus_tag="VLL76_12450"
     CDS             1807..2406
                     /locus_tag="VLL76_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015956418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HSV30364.1"
                     /translation="MGGKLEGKRVAILATDGFEQSELTSPRQALEQAGARVDVIAPHD
                     GAIQGMHHHDKGDTVAVDRTLAQAHPEEYDALMLPGGVANPDALRMDAKAVDFTRSFF
                     LTRKPVAAICHGPWTLVEAGVVQGRRLTSWPSLKTDIANAGGHWEDAPVIVDHGLVTS
                     RKPDDLDAFNAKMIEEFAEGAHPEKGYSAPPVARWPEAL"
     gene            complement(2403..2858)
                     /gene="ruvX"
                     /locus_tag="VLL76_12455"
     CDS             complement(2403..2858)
                     /gene="ruvX"
                     /locus_tag="VLL76_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HSV30365.1"
                     /translation="MPLCNLSDLKSALGRDQRLLGLDLGTKTIGLALSDVSRTIATPY
                     HTIRRTKFTKDAQELLAIVDKEGVGGLVVGLPVEMDGGEGPRCQSTRAFIANLFKIRD
                     LPVALWDERLSTSAVTRILLEADASRARRAEVVDKMAAGYILQGALDAR"
     gene            2920..3207
                     /gene="gatC"
                     /locus_tag="VLL76_12460"
     CDS             2920..3207
                     /gene="gatC"
                     /locus_tag="VLL76_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HSV30366.1"
                     /translation="MSLDKATVRSIAELARIEVPDEELEHLAGELSNILTFVEQLSEV
                     NTDGVAPMTSVAAMTLPMRKDEVTDGGQVDAVLANAPEPAEGFFTVPKVVE"
     gene            3306..4778
                     /gene="gatA"
                     /locus_tag="VLL76_12465"
     CDS             3306..4778
                     /gene="gatA"
                     /locus_tag="VLL76_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HSV30367.1"
                     /translation="MTELTKLTIAEARDRLAKGEFTAVELTSAHVKAMEAKRALNAFI
                     TETPELALEEAKASDMRRQAGTAGILDGIPLGIKDLFCTKGVLTTAASHILDGFKPQY
                     ESTVTANLKKAGAVSLGKLNLDEFAMGSANITSYYGPVENPWKSKSDPAKKLVPGGSS
                     GGSAAAVAARMVMGATGTDTGGSIRQPAAFCGITGIKPTYGRCSRWGTVAFASSLDQA
                     GPMARTVRDCAIMLEAMAGHDPKDSTSAPMKVPNFEAALTGDIKGMKVGIPKEYRPDG
                     LNEEVLKVWEQGIEWLKAAGATPVEISLPHTKYALPTYYIIAPAECSSNLARYDGVRF
                     GLRVPGKTLDEMYKKTRAAGFGKEVRRRILIGTYALSAGYYDAYYAKAQKVRTLIAQD
                     FAKAFENVDVILTPTAPSAAFGIGDNTDDPVTMWLNDVFTIPTSMAGLPGLSLPAGLS
                     SDGLPLGLQLIGRPFDEETVFKVAGVMEDAAQFTALPEGV"
     gene            4780..>5491
                     /gene="gatB"
                     /locus_tag="VLL76_12470"
     CDS             4780..>5491
                     /gene="gatB"
                     /locus_tag="VLL76_12470"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390923.1"
                     /note="allows the formation of correctly charged
                     Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
                     of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
                     which lack either or both of asparaginyl-tRNA or
                     glutaminyl-tRNA synthetases; reaction takes place in the
                     presence of glutamine and ATP through an activated
                     phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HSV30368.1"
                     /translation="MAYIIQGETCDWEIVIGLEVHAQVISKAKLFSGAATEFGAEPNS
                     QVSFVDAGMPGMLPVINEICVEQAVRTGLGLKAQINLTSVFARKNYFYADLPQGYQIS
                     QYELPIVGNGELLIDLPDGTTRAIGIERLHLEQDAGKSIHDMHPTKSFIDLNRSGVAL
                     MEIVSKPDMRSPEEAGAYLTKLRSILRYLGTCDGNMQEGSMRCDANVSVRPVGSTELR
                     TRCEIKNMNSMRFIQAAID"
BASE COUNT          991 a         1811 c         1758 g          931 t
ORIGIN      
        1 cacgcccagg gtgcgggcga acgggaaggc cttggggttg tcgcagcggc tcagcacgat
       61 ctcgcaggcg tcgtgggcct tcaccgcctt gacgaagtgg gtcagctcgg attccgaggt
      121 ggacagcagg tcgttgtgcc acaccacctt gacgtagttc ggcttcagct tgtccaggca
      181 caggatctcg aagtcgcgcc agtcgacgcc gtcgatgcac agcttgaggc ccttttcctc
      241 gaccagttgc ttgacgtcct tcatcaggtt gaaattctgg accaggtcgg tcttgtggat
      301 ttccagcacg atgcggccgg ccagcttgga cggcaacgcc tcgtagaaat ccgcgaattc
      361 ccggcccagg atggtggaca ggccgacgtt gacgctgaac gacttgtggc ggtagtcgac
      421 gatctccttg gccaccgtgc gcagggtggc gcggtcgaac tcctccttca gcgcctggaa
      481 cagccaagcg ttgcccagga tgttggtgtc gggcaggaag acgctctcga tctgcgccgt
      541 cgagacatag aattccagga attcgatgga cggcaccttg ttgccgatga aatagaccgg
      601 ctgattgaag atgcaggcgc gcagatcggc gttgcgcagc ttctcgcaca ggaaggacag
      661 gttttccggc gacagcggac gcttggtgta tttgtccggt tcgggctgcg actgggcgat
      721 gatggacttg aaggcggtga acaccttgtc gatgtccttg accgcgtcgg ccaccttgta
      781 gaagccgtat tcgttgtagg cgttgcgcgc cgacagcacc gccgattcgc agaacagctt
      841 ctcgacccgg ttgcacgagg ccagcacctc ggacaccgtg atgtgggaat aggtgacgaa
      901 gatgtcgccg ttatgggccg agaagacctg gcaatagggg ctcttggcga acgccttctt
      961 gatgaactgc ttggcgctgt cgatcttctt cgccatgtcg ccgccctggg gcgccagcga
     1021 cacgaagaaa tggatgatcc gcttgcccag cgggtccttc ttcacgctgt gcaattcgtg
     1081 caaaaaggca cgttcggact ctgtcacgcg catggtgaca ctcccctctc tcctcgtctc
     1141 tcccatgcgg ccccggcctt tgttttgggt ggccggttga tccgcgcgtc cgttggccgg
     1201 acgctggctt acttgtcctt ggctttggcg gcgatgaacg ccgcgtattc ggcatcgctt
     1261 tccaggatgt ggctgagcag ccagtccagc acgaaggcgc ggaccttgag gccggcctgc
     1321 agcatgtcgc cgccatcggc ctcgcggcgc aggcgggcga tctcgttcat gaattcatgg
     1381 tgcttggccg aatggccctc aagcccggga tagccccagg acttcatcaa cgcctcttca
     1441 tgggcgaagt gatagtcgat gtaggacccc agcgccccca gcacgtcggc gacgcaggcg
     1501 ccggccatgt cgttctggat gttgatgttc agctggttga ggatcgaaaa caggatcaga
     1561 tgctcggcat ccatttcttc ctgaccgatc ttgtaaccct cttcccagac cagcatcgcc
     1621 cttcccccca tttgtccgtc cagggacaaa aaaagccgtc gcgccaagat ggcggacggc
     1681 ttgtgtgcga gggagactac gcgtttgccc ggacccggat caagagcatt ttttccattt
     1741 tttaacgatt gaacccaacc cgccccaagg tgttggcccg aagaatcatg gtatcaggag
     1801 ggccgcatgg gcggaaaact tgaaggcaag cgagtggcga tccttgccac cgacggtttc
     1861 gagcagagcg aattgacctc gccgcgccag gcgctggagc aggctggcgc ccgggtggat
     1921 gtgatcgccc cccatgacgg cgccatccag ggcatgcacc accacgacaa gggcgacacc
     1981 gtcgcggtgg accgcaccct ggcccaggcc catcccgagg aatacgacgc cctgatgctg
     2041 cccggcggcg tcgccaatcc cgacgcgctg cgcatggatg ccaaggcggt ggatttcacc
     2101 cgcagcttct tcctgacccg caagccggtg gccgccatct gccacggccc gtggacgctg
     2161 gtcgaggccg gcgtcgtcca gggccgccgc ctgacctcct ggcccagcct gaagaccgac
     2221 atcgccaatg ccggcggcca ttgggaggac gcccccgtca tcgtcgacca cggcctggtc
     2281 accagccgca agcccgacga cctggatgcc ttcaacgcca agatgatcga ggaattcgcc
     2341 gaaggggcgc acccggaaaa gggctacagc gcgccgccgg tggcgcggtg gccggaagcg
     2401 ctttagcgcg cgtccagcgc gccttgcagg atgtagccgg cggccatctt gtccaccacc
     2461 tcggcgcggc gggcgcggct ggcgtcggct tccagcagga tgcgggtgac ggcggaggtg
     2521 gacaggcgct cgtcccacag ggcgacgggc aggtcgcgga tcttgaacag gttcgctatg
     2581 aacgcccgcg tcgactggca acgcgggcct tcgccgccgt ccatctcgac cggcaggccg
     2641 accaccaggc cgccgacgcc ttccttgtcc acgatcgcca gcaattcctg ggcatccttg
     2701 gtgaacttgg tgcgcctgat ggtgtgatag ggcgtggcga tggtgcgcga cacgtcggac
     2761 agggcgaggc cgatggtctt ggtgccgagg tcgagcccga gcaggcgctg gtcgcggccg
     2821 agggcggatt tgaggtctga caggttgcag agcggcatgg tgggtgctaa cgtccgccac
     2881 gctttaccaa aatgcaagat tcaacggaga ttccctcgca tgtcgctgga caaggccacc
     2941 gtgcgctcga tcgccgaact ggcgcgaatc gaggtcccgg atgaggagct cgaacacctc
     3001 gcgggcgagc tttccaacat cctgaccttc gtcgagcaac tgtcggaagt gaacaccgac
     3061 ggcgtcgcgc cgatgacttc ggttgccgcc atgaccctgc ccatgcgcaa ggacgaagtc
     3121 accgacggcg gccaggtgga cgccgtgctg gccaacgcgc ccgagcccgc cgagggcttc
     3181 ttcaccgtgc cgaaggtggt cgaatgatgg agcgcagcga ctgggccgtt gaggccccgc
     3241 gagccaatgc gagcgagagc caagcgcgcg gatgcgcgcg cccggcgact gagggacaga
     3301 actaaatgac cgagcttacc aagctgacca tcgccgaggc ccgcgaccgc ctggccaagg
     3361 gcgaattcac cgccgtcgag ctgacgagcg cccacgtcaa ggccatggag gccaagcgtg
     3421 cgctgaacgc cttcatcacc gagacgcccg aactggcgct ggaggaggcc aaggcctcgg
     3481 acatgcgccg ccaggccggc acggcgggca tcctcgacgg catcccgctg ggcatcaagg
     3541 acctgttctg caccaagggc gtgctgacca ccgccgccag ccatatcctc gacggcttca
     3601 agccgcagta tgagtccacc gtcaccgcca atttgaagaa ggccggcgcg gtgtcgttgg
     3661 gcaagctgaa cctggacgag ttcgccatgg gctcggccaa catcacctcg tattacggcc
     3721 cggtcgagaa cccgtggaag tccaagtccg acccggccaa gaagctggtg cccggcggct
     3781 cgtcgggcgg ttcggccgcc gccgtggccg cccgcatggt gatgggcgcc accggcaccg
     3841 acaccggcgg ctcgatccgc cagcccgccg ccttctgcgg catcaccggc atcaagccga
     3901 cctatggccg ctgctcgcgc tggggcaccg tcgccttcgc cagctcgctg gaccaggccg
     3961 gcccgatggc gcgcaccgtg cgcgactgcg ccatcatgct ggaggccatg gccggccacg
     4021 accccaagga ctcgacctcg gcccccatga aggtgccgaa tttcgaggcg gcgctgaccg
     4081 gcgacatcaa gggcatgaag gtgggcattc ccaaggaata ccgccccgac ggcctgaacg
     4141 aggaagtgct gaaggtgtgg gagcagggca tcgagtggct gaaggccgcc ggcgccactc
     4201 cggtcgagat cagcctgccg cacaccaagt atgcgctgcc gacctattac atcatcgccc
     4261 ccgccgaatg ctcgtcgaac ctggcccgct atgacggcgt ccgcttcggc ctgcgcgtgc
     4321 ccggcaagac cctggacgag atgtacaaga agacccgcgc cgcgggcttc ggcaaggaag
     4381 tccgccgccg catcctgatc ggcacctacg ccctgtcggc cggctattac gacgcctatt
     4441 acgccaaggc ccagaaggtg cgcaccctga tcgcccagga tttcgccaag gcgttcgaga
     4501 atgtggacgt catcctgacc ccgacggcgc cctcagccgc cttcggcatc ggcgacaaca
     4561 ccgacgatcc cgtcaccatg tggctgaacg acgtgttcac catccccacc agcatggccg
     4621 gcctgcccgg cctcagcctg ccggccggcc tgtcgtccga cggcctgccg ctgggcctgc
     4681 aactgatcgg ccgcccgttc gacgaggaga ccgtgttcaa ggtggccggc gtgatggaag
     4741 acgcggcgca gttcactgcg ctgccggagg gtgtgtgaca tggcttacat cattcagggc
     4801 gagacctgcg actgggagat cgtgatcggt ctcgaggtcc acgcccaggt catctcgaag
     4861 gccaagctgt tctcgggcgc cgccacggaa ttcggcgccg agcccaacag ccaggtcagc
     4921 ttcgtcgatg ccggcatgcc gggcatgctg cccgtcatca acgagatctg cgtcgaacag
     4981 gcggtgcgca ccggcctggg cctcaaggcc cagatcaacc tgaccagcgt gttcgcgcgc
     5041 aagaactact tctacgccga cctgccgcag ggctatcaga tcagccagta cgagctgccc
     5101 atcgtcggca acggcgagct gctgatcgac ctgcccgacg gcaccacgcg cgccatcggc
     5161 atcgagcgcc tgcacctgga gcaggatgcc ggcaagtcca tccacgacat gcacccgacc
     5221 aagtcgttca tcgacctcaa ccggtcgggc gtggcgctga tggagatcgt gtcgaagcct
     5281 gacatgcgca gccccgagga ggccggcgcc tacctcacca agctgcgctc gatcctgcgc
     5341 tatctcggca cctgcgacgg caacatgcag gaaggcagca tgcgctgcga cgccaacgtg
     5401 tcggtccgcc cggtgggttc gaccgagctg cgcacccgct gcgagatcaa gaacatgaac
     5461 tcgatgcggt tcatccaggc cgccatcgac c
//
LOCUS       DATIKR010000791         2414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_120540, whole genome shotgun sequence.
ACCESSION   DATIKR010000791 DATIKR010000000
VERSION     DATIKR010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120540"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..942)
                     /locus_tag="VLL76_12475"
     CDS             complement(34..942)
                     /locus_tag="VLL76_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019857089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HSV30369.1"
                     /translation="MGLPIVIEILRGGLVESRHLGNAAVCDPAGAVVAEWGDSDRPTF
                     PRSAIKPIQALPLVESGAADAFALTDEELALATASHSGEPMHTERVARWLARIGLGPE
                     ALECGAGDRASPLHNNCSGKHAGFLTVARHLGIRSAGYIRHDHPVQQMVSAAIAEATG
                     TAGAPWGTDGCGIPTFSLPLSGIARAMAGMTTDRPAAARIVAAMRAHPHLVAGTNRLC
                     TRFMQAVPGIVVKGGAEGVYGAIVPKKGWGVALKIEDGAGRAAEAAILAVLAKLKLVS
                     EERASQLTPEIRNAAGKIVGEVRVTV"
     gene            1017..1520
                     /locus_tag="VLL76_12480"
     CDS             1017..1520
                     /locus_tag="VLL76_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HSV30370.1"
                     /translation="MRHTTTVLAAAMIAGLATGAGAAELGRFGQWEAYVLSDASGKFC
                     YAAARADKLQGGDKNRVGTALAVSHRAKSPNEVSVTGPYGFKKDSDVEIQIGGMKHTL
                     FTKGGQNAWAKDGAADKAIVAAMAKGKEVLVRATPAKGAAVSDSIPLKGFSDALAAID
                     KACGVKR"
     gene            1609..2121
                     /locus_tag="VLL76_12485"
     CDS             1609..2121
                     /locus_tag="VLL76_12485"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV30371.1"
                     /translation="MTATDMTDAVALLRRAGLAPTRRRLAVAALVFSGATVPQSVEEL
                     RERAIDAGICLSPEAAEESLAELRAVGLLPQFLTARVEPRADVKRAARLLQAMGNPHR
                     LLVLRELLDGEKCVGELLRTAGIQQSALSQHLARLRSDGLVTARRAARNIFYSLAGGD
                     VPMVLRSLGQ"
     gene            2176..>2414
                     /locus_tag="VLL76_12490"
     CDS             2176..>2414
                     /locus_tag="VLL76_12490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30372.1"
                     /translation="MNLTRYTPQLAQAFFLLVEQPRMLARVAAAWFVLALAAQAATFT
                     QQPGLMLAAFLLNALAFGAFGYHWQRFVAQGEQPTG"
BASE COUNT          360 a          849 c          825 g          380 t
ORIGIN      
        1 gcgggtcaag gcgtgtcgcc caattcgtgg cgcctatacc gtgacccgca cctcgcccac
       61 gatcttgccc gccgcattcc tgatttccgg cgtcagttgc gacgcccgct cctcggacac
      121 cagtttcagc ttcgccagca cggccaggat tgcggcctcg gcggcgcgtc cggcgccgtc
      181 ctcgatcttg agagccacgc cccagccctt cttggggacg atggcgccgt agacgccctc
      241 ggcaccgccc ttgacgacga tgcccggcac cgcctgcatg aagcgggtgc acagccggtt
      301 ggtgcccgcc accaaatgcg gatgggcgcg catggcggcg acgatgcggg cggcggcggg
      361 ccggtccgtg gtcatgcccg ccatggcccg tgcgatgccc gacagcggca gcgagaaggt
      421 ggggatgccg cagccgtcgg tgccccacgg cgcgccggcg gtgccggtgg cctcggcgat
      481 ggcggcggac accatttgct gcaccgggtg gtcgtgccgg atgtaaccgg cgcttcggat
      541 tcccaggtga cgcgccaccg tcaggaagcc ggcatgcttg cccgagcaat tgttgtgcag
      601 cggcgacgcc cggtcgccag cgccgcattc cagcgcctcc ggccccaggc cgatgcgggc
      661 cagccagcgc gccacccgct cggtgtgcat gggctcgccg gaatgggacg cggtggccag
      721 cgccagttcc tcgtcggtca gggcgaaggc gtcggccgcg ccgctttcca ccagcggcag
      781 cgcctggatc ggcttgatgg ccgaacgcgg gaaggtgggg cggtctgaat cgccccattc
      841 cgcgacgacg gcgccggccg ggtcgcacac cgccgcattg cccagatggc ggctttccac
      901 caggccgccg cgcagaatct cgatgacgat gggaaggccc ataggttttc cccagttgac
      961 agggactccg atgaattggt ctatgtccgc gaccaacgga atatggggat accgacatgc
     1021 gtcacaccac caccgtgctc gccgcagcca tgatcgcggg cctcgccacc ggtgccggcg
     1081 ccgccgaact tgggcgtttc ggccagtggg aggcctatgt cctgtccgac gcgtcgggca
     1141 agttctgcta tgccgccgcc cgcgccgaca agctgcaggg cggcgacaag aaccgcgtcg
     1201 gcaccgcgct ggccgtgtcg caccgcgcca aaagccccaa cgaggtcagc gtcaccggtc
     1261 cctatggctt caagaaggac agcgacgtgg agatccagat cggcggcatg aagcacaccc
     1321 tgttcaccaa gggcggccag aacgcctggg ccaaggacgg cgccgccgac aaggccatcg
     1381 tcgccgccat ggccaagggc aaggaagtgc tggtccgcgc cacccccgcc aagggcgccg
     1441 ccgtcagcga ttccatcccg ctcaagggct tttccgacgc cctggccgcc atcgacaagg
     1501 cgtgcggggt caagcggtaa ggccgcatcg ctttttgttc ggaaagcccc tttacacgac
     1561 acgctgcgaa tgattatcat ccgcaacatc gaaagaggga ggaccgccat gaccgcgacc
     1621 gatatgaccg atgccgtcgc gctgttgcgc cgtgctggat tggcgcccac gcggcgtcgg
     1681 ctggcggtgg cggccttggt gttttccggg gcgaccgtgc cgcaatcggt cgaggaattg
     1741 cgcgagcgcg ccatcgatgc cggcatctgc ctgtcgcccg aggcggccga agaatccttg
     1801 gccgagctcc gggccgtcgg cctgttgccg caattcctga ccgcgcgcgt cgaaccgcgc
     1861 gccgacgtca agcgggcggc gcggctgttg caggccatgg gcaatccgca ccggctgctg
     1921 gtcctgcggg aattgctgga cggcgagaaa tgcgtcggcg agttgctgcg gacggccggc
     1981 atccagcaat cggcgctgtc gcaacatctg gcgcggctgc gctcggatgg cctggtcacc
     2041 gcccgccggg cggcccgcaa catcttctat tccctggccg gcggcgacgt gccgatggtg
     2101 ctgcgctcgc tggggcagtg acggcgcggc caaagccgat tagagtgcgc tccgcttttg
     2161 gatggggacg cgccgatgaa cttgacccgc tacacgccgc aactggccca ggctttcttc
     2221 ctgctggtgg agcagccgcg catgctggcg cgcgtcgccg ccgcgtggtt cgtgctggcc
     2281 ctggcggccc aggccgccac cttcacccag cagccgggcc tgatgctggc tgcgttcctg
     2341 ctcaatgccc tggccttcgg cgccttcggc taccactggc agcgcttcgt cgcccagggc
     2401 gagcagccca ccgg
//
LOCUS       DATIKR010000792         5039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_120619, whole genome shotgun sequence.
ACCESSION   DATIKR010000792 DATIKR010000000
VERSION     DATIKR010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 5039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120619"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VLL76_12495"
     CDS             complement(<1..1061)
                     /locus_tag="VLL76_12495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30373.1"
                     /translation="MAANANFEVHVMRAGRWAMDCVAATESEAREVAKKLLANKQCEG
                     ARVIRNWMRADGMMVEAEIFCETRTLRDDDTVRIVAVEDAPPTCEVPAQYYGMSSRMV
                     MNRLFRNYFEKAILTPTEVIHNYNELKRIQDKDMLVPSAVDRVATLQTRDTDQDSRVR
                     RDDIHKNIDRMASRARRAAAMKLPKLNGRFADLHRKMAEMAEDDVDADYLSMVALSRE
                     LVTLRNWLAKLERLCGLAAAEIDPHGLELLDGVIADVLGANVVQEILGWQAGMGPAII
                     AMLDLADGKLLIEKSDAVEMATALNGLFAAGKLPTSRLSLLDRVHRQLRSANPLYRND
                     PAKENEAFARVAERLMTPTG"
     gene            1230..1541
                     /locus_tag="VLL76_12500"
     CDS             1230..1541
                     /locus_tag="VLL76_12500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV30374.1"
                     /translation="MSGNFRFTWLRPGGWTRLGIVGAVMVLFGTPMLWAVGMFGDGDD
                     ALGRAAVFLLAGLWLFGAGGYAVGWAIRGFIVRQKDPEEEEDRDAPPARPGAPPHRPG
                     H"
     gene            complement(1545..2156)
                     /locus_tag="VLL76_12505"
     CDS             complement(1545..2156)
                     /locus_tag="VLL76_12505"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSV30375.1"
                     /translation="MTVPTTRWWLVRHAPVPCPQGRITGRLDVACDVSDEEDFRQLAA
                     RLPRNGMLVESGLMRCRQTAGALETAGLMLPPPIVEPELVEQNFGAWQGKSWLELEAA
                     KDSGLAAFWADPAEATPPEGESFGTMCARVRRAILRLSEQNPGRDVVAIVHAGTVRAA
                     LAMALGLEPAQALRFVVQPLSLTRIDGTPEGWRVECVNVTASI"
     gene            complement(2153..2950)
                     /gene="cobS"
                     /locus_tag="VLL76_12510"
     CDS             complement(2153..2950)
                     /gene="cobS"
                     /locus_tag="VLL76_12510"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HSV30376.1"
                     /translation="MNATEPSQQNIPDVSPLRRAVADLHLAAAFLTRLPLPDLGPVAE
                     GGLARAMRGFPLVGGGLGILAGLVFMAAHSVLPAALAAVLAVLALVLLTGALHEDGLA
                     DTADGLGARGDRERRLEVMRDSRSGAYGVLALIFSIGIRAVALAQAPSGAAGLGALVA
                     ACALGRALVPAAMQVMPPARPDGLGAMAGVPDASVAALAAVLGLMLTVAGMGQAAPVV
                     IVSAVAAALAVVAVARRALGGYTGDVLGAVVQAAEAAVLVAAVGVWQ"
     gene            3032..4033
                     /gene="cobT"
                     /locus_tag="VLL76_12515"
     CDS             3032..4033
                     /gene="cobT"
                     /locus_tag="VLL76_12515"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008939 -
                     nicotinate-nucleotide-dimethylbenzimidazole
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HSV30377.1"
                     /translation="MTISSVDDIVFLLQAAPGADAGAVAAWDARDPQLTKPPGALGRL
                     EDISRWLCAWQGRHPPRVERSIARVFAGNHGVAALGVSAFPAEVTVQMVMNFERGGAA
                     INQLCATFGTELQVVSLDLDCPTADFTQRPAMTEAEFAAAFQAGMAAVPDGADLLAIG
                     EMGIGNTTPAAAIACALFGGEAAEWTGAGTGVSGAALARKTEVVAAGVALHRGQAPLD
                     ILRRLGGRELAAMAGATVAARLKRVPVLLDGYVCTAAVAPLQVAMPGALDHCLVAHAS
                     AEPGHRKLMDRLGKAPLFDLGMRLGEASGAALAVGMVKAAAACHAGMATFGEAGVSQ"
     gene            complement(4051..>5039)
                     /locus_tag="VLL76_12520"
     CDS             complement(4051..>5039)
                     /locus_tag="VLL76_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV30378.1"
                     /translation="ADAAMAMTAQGRYFRHILLEGLVGEFSDHARLINDALTSMEARS
                     REFVTEATGVGNTIKHMSQAVAATATELEATATQMSDIASRTSSQSQTVAQAAEDASA
                     NTESVAAAAEQVSSGIREVAQRIQQSADMAQETVRVAGDTDHAIQGLLEAAHKIGEVV
                     NLITEIASQTNLLALNATIEAARAGEAGKGFAVVANEVKHLANQTARATDEISAQIDG
                     MRQATGQAADAVRNIATMIRAINDNSTGIASATEQQSAAVAEMSRNIREVAAGVHTVA
                     ATIGEVAEIAGTATEAANQVLVAAGDMAQRTVSMNDDIDGFISRVCSGIRMQ"
BASE COUNT          687 a         1755 c         1781 g          816 t
ORIGIN      
        1 ccggtgggcg tcatcagccg ttcggcgacg cgggcgaagg cctcgttttc cttggccggg
       61 tcgttgcggt acagcgggtt ggccgagcgc agctggcggt ggacgcggtc cagcaggctg
      121 aggcggctgg tcggcagctt gccggcggcg aacaggccgt tgagcgccgt cgccatctcg
      181 accgcgtcgc tcttttcgat cagcagcttg ccgtcggcca aatccagcat ggcgatgatg
      241 gccggcccca tgccggcctg ccagccaagg atttcctgca ccacgttggc gcccagcacg
      301 tcggcgatga cgccgtcgag caattccagc ccgtgcgggt cgatctcggc ggcggccaga
      361 ccgcacagtc gttccagctt ggccagccag ttgcgcagcg tcaccagttc acgcgacagc
      421 gccaccatcg acaggtagtc ggcgtccacg tcgtcctcgg ccatttcggc catcttgcgg
      481 tgcaggtcgg cgaagcggcc gttcagcttc ggcagcttca tggccgccgc acgccttgcg
      541 cgggacgcca tccggtcgat gttcttgtgg atgtcgtcgc ggcgcacccg cgaatcctgg
      601 tcggtgtcgc gcgtctgcag ggtggcgacg cggtcgacgg ccgacggcac cagcatgtcc
      661 ttgtcctgga tgcgcttcag ctcgttgtaa ttgtggatga cttcggtggg ggtgaggatg
      721 gctttttcga aataattgcg gaacagccgg ttcatcacca tgcggctgga catgccgtaa
      781 tactgggcgg gaacctcgca ggtcggcggc gcgtcctcga ccgcgacgat gcggacggtg
      841 tcgtcgtcgc gcagggtgcg ggtttcacag aagatctcgg cctcgaccat catgccgtcg
      901 gcgcgcatcc agttgcggat gacgcgcgcg ccttcgcatt gcttgttggc cagcagcttc
      961 ttggcgacct cgcgggcctc ggattccgtc gcggcgacgc aatccatcgc ccagcgcccg
     1021 gcgcgcatga cgtgaacttc gaaattggcg tttgccgcca tgtgcccttc ctttcccgcc
     1081 atccccatgg cgggttgccc tttatacatc ctagataccg ctttagcgct ccgccgtcat
     1141 catctagttg gccctcggaa atgggctatt gctaaggcct tggcgaaggc cgacaattgg
     1201 ctgaggggct gactaccatg gagggagcga tgtccggcaa cttccgcttt acgtggctgc
     1261 gcccgggcgg ctggacccgc ctcggcatcg tcggcgccgt catggtgctg ttcggcaccc
     1321 ccatgctgtg ggccgtcgga atgtttggcg acggcgacga cgccctgggc cgcgccgccg
     1381 tcttcctgct ggccgggcta tggcttttcg gcgcgggtgg ttatgccgtc ggctgggcca
     1441 tccgcggctt catcgtgcgt cagaaggacc ccgaggaaga ggaagaccgc gacgccccgc
     1501 cggcccgtcc cggcgcaccg ccgcaccgac cgggtcacta gactctagat ggacgccgtc
     1561 acgttgacgc attcgacgcg ccagccctcg ggcgtgccgt cgatgcgggt cagcgacagc
     1621 ggctgcacga cgaagcgcag ggcttgcgcc ggctcaagcc ccagggccat cgccagcgcg
     1681 gcgcgcacgg tgccggcatg gacgatggcg accacgtcgc gccccgggtt ctgctcggac
     1741 aggcgcagga tggcgcggcg gacgcgggca cacatggtgc cgaagctttc gccctcgggc
     1801 ggggtcgcct cggccgggtc ggcccagaag gcggcgaggc cggaatcctt ggcggcttcc
     1861 agttccagcc agctcttgcc ctgccaggcg ccgaaattct gttccaccag ttccggctcg
     1921 acgatgggcg gcggcagcat caggccggcg gtttccaagg cgccggccgt ctggcggcag
     1981 cgcatcaggc cgctttccac cagcatgccg ttcctcggca gacgcgccgc caattgacgg
     2041 aaatcctctt cgtcggagac gtcgcaggcg acgtcgagcc ggccggtgat gcgcccctgc
     2101 ggacacggca ccggcgcatg gcgcaccagc caccaacggg ttgtcggaac cgtcattgcc
     2161 acacccccac cgccgccacc agcacggccg cctcggccgc ctgcaccacc gcgcccagaa
     2221 cgtcgccggt atatccgccc aaagcccgcc gcgccaccgc caccaccgcc agggcggccg
     2281 ccacggccga cacgatgacc accggtgccg cctggcccat gccggcaacc gtcagcatca
     2341 gcccgagcac ggcggccagc gccgccaccg aggcgtcggg cacgcccgcc atggcgccca
     2401 ggccgtcggg ccgggccggc ggcatcacct gcatggcggc gggcaccagc gcgcggccca
     2461 gggcgcaggc cgccaccagc gcgcccaacc cggccgctcc gctgggggcc tgggccagcg
     2521 ccacggcgcg gatgccgatg gaaaagatca aggccagcac accataggcg ccgctgcgcg
     2581 aatcccgcat cacctcgagc cggcgctcgc ggtcgccgcg cgcgcccagg ccgtcggcgg
     2641 tgtcggccaa tccgtcctca tgcagggcac cggtcagcag caccagcgcc agcaccgcca
     2701 gcacggccgc cagggcggcg ggcagcaccg aatgggcggc catgaacacc aggccggcca
     2761 ggatgccgag accgcccccg accagcggga acccgcgcat ggcccgcgcc agcccaccct
     2821 cggccaccgg ccccagatcg ggcaacggca ggcgcgtcag gaaggcggcc gccagatgca
     2881 ggtcggccac ggctcggcgc agcggcgaga cgtcggggat gttctgttgg ctgggctctg
     2941 tcgcattcat cgcaggtgac gccggttgtt ggatgggtta taggacgaac ggccgcgccc
     3001 acgcaatata ttggggagca tagctttgaa tatgaccatt tctagtgtgg acgacattgt
     3061 cttcctgttg caggcggccc ctggcgccga cgccggcgcg gtggcggcat gggatgcgcg
     3121 cgacccgcaa ctgaccaagc caccgggcgc gctcggccgg ctggaagaca tctcgcgctg
     3181 gctgtgcgcc tggcagggcc gccatccgcc acgcgtcgag cgctccatcg cccgtgtttt
     3241 cgccggtaat cacggtgtcg ccgcgctggg cgtgtcggcc tttcccgccg aggtcaccgt
     3301 gcagatggtg atgaatttcg agcgcggcgg cgccgccatc aaccagctct gcgccacctt
     3361 cggcaccgag ttgcaggtgg tgtcgctgga cctcgattgc ccgacggccg acttcacgca
     3421 aaggccggcc atgaccgagg ccgaattcgc cgccgccttc caggccggca tggcggcggt
     3481 gcccgacggc gccgatctgc tggccatcgg cgagatgggc atcggcaaca ccacccccgc
     3541 agccgccatc gcctgcgcat tgttcggcgg cgaagcggcc gagtggaccg gtgccggcac
     3601 cggcgtctcc ggcgcggccc tggcccgcaa gaccgaagtg gtcgcggccg gcgtggcgtt
     3661 gcaccgcggc caggcgccgc tggacatcct gcgccgcctg ggcggccgcg aactggccgc
     3721 catggccggc gccaccgtgg cggcgcggct gaagcgggtt ccggtgctgc tggacggcta
     3781 tgtctgcacc gccgccgtgg cgccgctgca ggtggcgatg ccgggcgcgc tcgaccattg
     3841 cctggtcgcc cacgcctcgg ccgaacccgg ccaccgcaag ctgatggacc gcctgggcaa
     3901 ggcgccgctg ttcgatttgg gcatgcgcct gggcgaggcc tcgggcgccg ccttggcggt
     3961 ggggatggtc aaagcggccg cagcctgcca tgccggcatg gcgaccttcg gggaggcggg
     4021 ggtcagccag tagaccctcg cccttcgcgc ttattgcata cggatgccgc tgcacacgcg
     4081 gctgatgaag ccgtcgatgt cgtcgttcat gctgaccgtg cgctgcgcca tgtcgccggc
     4141 cgcgaccagc acctggttgg cggcctcggt ggcggtgccg gcgatctcgg cgacctcgcc
     4201 gatggtggcg gccacggtgt ggacgccggc ggcgacctcg cggatgttgc gcgacatctc
     4261 ggcgacggct gcgctttgct gctcggtggc cgaggcaatg ccggtcgagt tgtcgttgat
     4321 ggcgcggatc atggtggcga tgttgcgcac ggcgtcggcc gcctggccgg tggcctggcg
     4381 catgccgtcg atctgggccg agatctcgtc ggtggcgcgg gcggtctggt tggcgaggtg
     4441 cttgacctcg ttggcgacga cggcaaagcc cttgccggcc tcgccggccc gggcggcctc
     4501 gatggtggcg ttcagggcca aaaggttggt ctggctggcg atctcggtga tcaggttgac
     4561 cacctcgccg atcttgtggg cggcctccag caggccctgg atggcgtggt cggtgtcgcc
     4621 ggccacgcgc acggtttcct gcgccatgtc ggcggattgc tggatgcgct gggcgacctc
     4681 gcggatgccc gacgacacct gctcggcggc ggcggccacc gattcggtgt tggccgaggc
     4741 gtcctcggcg gcctgggcca cggtctggga ctggctcgag gtgcggctgg cgatgtcgct
     4801 catctgggtc gcggtcgcct ccaattcggt ggcggtggcg gcgacggcct ggctcatgtg
     4861 cttgatggtg ttgccgacgc cggtcgcctc ggtgacgaac tcgcgcgagc gcgcctccat
     4921 gctggtcagg gcgtcgttga tcaggcgggc atggtccgag aactcgccca ccaggccctc
     4981 cagcaggatg tgccggaaat aacggccctg ggcggtcatc gccatggcgg cgtcggcct
//
LOCUS       DATIKR010000793         2537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_133023, whole genome shotgun sequence.
ACCESSION   DATIKR010000793 DATIKR010000000
VERSION     DATIKR010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133023"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="VLL76_12525"
     CDS             complement(<1..542)
                     /locus_tag="VLL76_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HSV30379.1"
                     /translation="MAKNPTLVAASDAAALANGSHGNPFGVLGPHRTKAGPVVRAFLP
                     QARRAWVVGPAGDVEMDRVPDSDMFAASVDDATARSYRLRLEYQDGRLDTIDDPYRFP
                     PVLGDLDIHLLIEGSHLRTFEKLGSHCVTVDGVQGVHFAVWAPNAQRVSVVGDFNGWD
                     GRRHVMRLRHDAGVWEIFIPG"
     gene            complement(606..>2537)
                     /locus_tag="VLL76_12530"
     CDS             complement(606..>2537)
                     /locus_tag="VLL76_12530"
                     /inference="COORDINATES: protein motif:HMM:TIGR02457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative maltokinase"
                     /protein_id="HSV30380.1"
                     /translation="RSPSSLLNWMKRMIAVRRGRKSFGRGNLRFLYPKNRKVLCYLRE
                     YEDETVLCVCNLSRAAQGVELDLGMFRGRVPVELTGQSTFPPIGELPYFLTMPGYGFY
                     WFLLSKETEAPAWHIEMPNPMEELVPIVLREEGFADLTAGQGRRLLEAEVLPAYLQLR
                     RWYADKDVGLDGCELLRWGELATSRGTWLITLVAVRRADGGMTTYQLPLAMSWGEEHG
                     PSGLTLSRLRRGARVGLLTDAYCSDDFLLALVEAMRTGAVIQGTYGNVAGRATRALEA
                     VELPEMPAIHHLGVEQSNSTAIIGDTLVLKLFRRPAEGVNPEVEIGRFLTDTAHFANT
                     PPLLGWWEMVDAAGGASVMGIMHGFVRNQGDAWEWTLSQLGSFLDEAILLPPEGTSER
                     LSHGRMGDYQAFVATIGRRTAEMHKALLTPTEDPAFKPAPVTRDDLDRWRRRALDQAR
                     QAVKAVEGSDLPEAAWLAANAARLFDAIDSRVPDQPFGTVGRIHGDYHLGQLLVSQND
                     VYVIDYEGEPKRAIEERRAKDSPLRDVAGMLRSFDYAGWAALSRIAAARPEAPAQLEA
                     VIRDWRDRVSRAFLESYITTAEQGAALPVVHPQAKPLLDMFLIEKACYEIAYEASHRP
                     AWLAVPVRGLIAMLTADDA"
BASE COUNT          409 a          886 c          863 g          379 t
ORIGIN      
        1 ccggggatga agatctccca cacgccggcg tcgtggcgca gccgcatgac gtggcggcgg
       61 ccgtcccagc cgttgaagtc gccgaccacc gagacgcgct gggcgttggg cgcccacacg
      121 gcgaaatgca cgccctggac gccgtcgacg gtgacgcaat gcgaacccag cttttcgaag
      181 gtgcgcagat gcgagccctc gatcagcagg tggatgtcga ggtcgcccag caccggcggg
      241 aagcgatagg ggtcatcgat ggtgtcgagg cggccgtcct ggtattccaa gcgcaagcga
      301 taggatcgcg cggtggcgtc gtcgaccgag gcggcgaaca tgtcgctgtc gggaacccga
      361 tccatctcga cgtcacccgc cgggccgacc acccaagccc gccgcgcctg cggcaggaag
      421 gcgcgcacca ccggccccgc cttggtgcgg tgcggcccca gcacgccgaa cggattgccg
      481 tgactgccgt tggcgagcgc cgccgcgtcg gacgcagcga caagcgtcgg gttcttggcc
      541 atggggtttc cctctttcac tccactagcc gaagcatccg cctcttccac agcgatgaca
      601 acccgtcatg cgtcatcggc cgtcagcatg gcgatcaggc cgcgcaccgg caccgccagc
      661 caggcggggc gatgcgacgc ctcgtaggcg atctcgtaac aggccttctc gatcaggaac
      721 atatccagca gcggcttggc ctggggatgc acgaccggca acgccgcccc ctgctcggcg
      781 gtggttatgt aggattcgag gaacgccctg gacacccggt cgcgccaatc gcgtatcacc
      841 gcctccaact gggccggggc ctcgggacgg gcggcggcga tgcgcgacag cgccgcccag
      901 ccggcatagt cgaacgagcg cagcatgccg gccacgtcgc gcagcggact gtccttggcg
      961 cggcgctcct cgatggcgcg tttcggctcg ccctcgtaat cgatgacgta gacgtcgttc
     1021 tgcgacacca gcaactggcc cagatggtag tcgccgtgga tgcggcctac ggtgccgaag
     1081 ggttggtcgg gcacgcggga atcgatggcg tcgaacaggc gtgcggcatt ggccgccagc
     1141 cacgccgcct cgggcaggtc gctgccttcg accgccttga ccgcttggcg cgcctggtcc
     1201 agcgcccgcc gccgccagcg gtccaggtcg tcgcgggtga ccggcgccgg cttgaaggcg
     1261 gggtcctcgg tgggcgtaag caaggccttg tgcatctcgg cggtgcgccg gccgatggtg
     1321 gcgacgaagg cctggtagtc gcccatgcgg ccgtggctca ggcgttcgga cgtcccctcg
     1381 ggcggcagca ggatcgcctc gtcgaggaag ctgcccagtt gcgacagggt ccattcccag
     1441 gcatcgccct ggttgcggac gaagccgtgc atgatcccca tgacggaggc cccgcccgcc
     1501 gcatccacca tctcccacca gcccagcagc ggcggcgtgt tggcgaaatg ggcggtgtcg
     1561 gtgaggaagc ggccgatctc gacctcgggg ttgacgccct cggccggccg gcggaacagc
     1621 ttgagcacca gggtgtcgcc gatgatggcg gtggaattgg attgttcgac gcccaggtgg
     1681 tggatggcgg gcatctcggg caattccacc gcctccagcg cccgcgtcgc gcggccggcg
     1741 acgttgccgt aggtgccctg gatcaccgcc ccggtgcgca tggcctcgac cagcgccagc
     1801 aggaaatcgt cgctgcaata ggcgtcggtc agcagcccga cccgggcgcc gcgccgcagc
     1861 cgcgacagcg tcagcccact ggggccgtgc tcctcgcccc aactcatggc cagcggcaat
     1921 tggtaggtgg tcatgccacc atcggcacgt cgcaccgcca ccaacgtgat cagccaggtg
     1981 ccccggctgg tcgccagctc gccccagcgc agcaattcgc agccgtccag gccgacatcc
     2041 ttgtcggcgt accagcgccg caattgcaga taggccggca gcacctcggc ctccagcagg
     2101 cgccgcccct gccccgccgt caggtcggcg aagccctcct cgcgcagcac gatgggcacc
     2161 agttcctcca tgggattggg catctcgatg tgccaggccg gcgcctcggt ctccttggac
     2221 aacaggaacc aatagaagcc gtagccgggc atggtcagga aatagggcag ctcgccgatg
     2281 ggcgggaagg tcgactggcc ggtcagctcg accggcacgc ggccgcggaa catgccgagg
     2341 tccagctcga cgccctgggc cgcgcgcgac aggttgcaca cgcacagcac cgtctcatcc
     2401 tcgtattccc gcagatagca cagaactttt cgattcttgg gatagaggaa gcgcaggttg
     2461 ccgcgtccga acgacttgcg gccgcgccgc accgcgatca tccgcttcat ccagttcagc
     2521 agcgacgacg gcgagcg
//
LOCUS       DATIKR010000794         1953 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_60024, whole genome shotgun sequence.
ACCESSION   DATIKR010000794 DATIKR010000000
VERSION     DATIKR010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60024"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1625
                     /locus_tag="VLL76_12535"
     CDS             <1..1625
                     /locus_tag="VLL76_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV30381.1"
                     /translation="KALGILLDCKAIDAVLTMYAPTAISDPNEVAEAVIKVVKERPRA
                     NVMTCWVGHEKVAQARRLFSEAAVPTFDTPYAAVEGFLHLLEYRRNQELLMEVPPSAT
                     SEFIPDTGFAKQIIAEALAAGETLLREPEAKAVLAAYGIPTVETRTAKTPADAGRMAK
                     DFDGPVVLKILSPDIVHKSDVGGVVLNLTGAFAVEKAANAMLERVGATYPDARIDGFT
                     VQRMAKRGPGTQELILGVATDPLFGPVILFGQGGVEVEVVADRAVALPPLNINLAAEL
                     VERTRVAKLLKGYRGRPPANMEALHLTLLQLSQMVVDLPELVELDINPLLCDSQGVMA
                     LDARIKIGPARPGTDRLAIRPYPEELEEWFTMTDGRKVLIRPIRPEDEPNHHVFVSKL
                     TREDIRFRFFGLVHELPHTEMARLTQIDYDREMAFIGEFVREDGSKETLGVVRTVTDP
                     DNEKAEFAVVVRSDLKATGLGKRLLTKMIEYCRTRGTGAIVGQVLKDNVRMLKFVEHL
                     GFKQVRTVDGDIVEVEIDLHNTQPPTTPPPQD"
     gene            1700..>1953
                     /locus_tag="VLL76_12540"
     CDS             1700..>1953
                     /locus_tag="VLL76_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HSV30382.1"
                     /translation="MSTATIIGFIGGLVLFFGSIFLATDNYLVFLDLASLIMVVGGTF
                     ASTFISYEPRYVMQAFRLMASIFFAPKVQRGVLQGEVARC"
BASE COUNT          340 a          683 c          611 g          319 t
ORIGIN      
        1 ccaaggcgct gggcatcctg ctggattgca aggccattga cgcggtgctg accatgtacg
       61 cccccaccgc catctcggac cccaacgagg tcgccgaggc ggtgatcaag gtggtcaagg
      121 agcgcccgcg cgccaacgtc atgacctgct gggtcggcca cgaaaaggtg gcccaggcgc
      181 gccgcctgtt ctcggaggcg gcggtgccga ccttcgacac cccctatgcc gccgtcgagg
      241 gcttcctgca cctgctggaa taccgccgca accaagaact gctgatggaa gtgccgccct
      301 cggccaccag cgagttcatt cccgacaccg gcttcgccaa gcagatcatc gccgaggccc
      361 tggccgccgg cgagaccctg ctgcgcgagc ccgaggccaa ggcggtgctg gcggcctatg
      421 gcatccccac cgtcgagacc cgcaccgcca agacgccggc cgacgccggc cgcatggcca
      481 aggatttcga tggtccggtg gtgctgaaga tcctgtcgcc cgacatcgtg cacaaatcgg
      541 acgtgggcgg cgtggtgctg aacctgaccg gcgccttcgc ggtggaaaag gccgccaacg
      601 ccatgctgga acgcgtgggc gccacctatc ccgacgcccg catcgacggc ttcaccgtgc
      661 agcgcatggc caagcgcggc cccggcaccc aggaactgat cctgggcgtc gccaccgacc
      721 cgctgttcgg cccggtcatc ctgttcggcc agggcggcgt cgaggtcgag gtcgtggccg
      781 accgcgccgt ggcgctgccg ccgctcaaca tcaacctggc ggccgaactg gtcgagcgca
      841 cccgcgtcgc caagctgctg aagggctatc gcggccgccc gccggccaac atggaagcgt
      901 tgcacctgac cctgctgcaa ttgtcgcaga tggtggtcga cctgcccgag ctggtggaac
      961 tcgacatcaa cccgctgctg tgcgacagcc agggcgtgat ggcgctggac gcccgcatca
     1021 agatcggccc ggccaggccc ggcaccgacc gcctcgccat ccggccctac ccggaagagc
     1081 tcgaggaatg gttcaccatg accgacgggc gcaaggtgct gatccgcccc atccgccccg
     1141 aggacgaacc caaccaccac gtcttcgtgt ccaagctgac ccgcgaggac atccgtttcc
     1201 gcttcttcgg cctggtgcac gagttgcccc acaccgaaat ggcgcggctg acccagatcg
     1261 actatgaccg cgagatggcg ttcatcggtg aattcgtgcg cgaggacggc agcaaggaaa
     1321 cgctgggcgt ggtgcgcacc gtcaccgacc ccgacaacga aaaggccgaa ttcgccgtgg
     1381 tggtccgctc ggacctcaag gcgaccggcc tgggcaagcg cctgctgacc aagatgatcg
     1441 agtattgccg cacccgcggc accggcgcca tcgtcggcca ggtgctgaag gacaacgtgc
     1501 gcatgctgaa attcgtcgag catctgggct tcaagcaggt gcgcacggtg gacggcgaca
     1561 tcgtcgaggt cgagatcgac ctccacaaca cgcagccgcc aaccactccg ccgccccagg
     1621 actgaccccc tttctattgc cgcgctagcc cttttttggc acaaaggaag agcgtggacg
     1681 cagggggatt ccaggtcaga tgtcgacagc gactatcatc ggttttatcg gcggcctggt
     1741 cctctttttt gggtcgatct tcctcgccac cgataattac ctcgtcttct tggacctggc
     1801 gtcgctgatc atggtggtcg gcggcacctt cgcctcgacc ttcatctcgt acgaaccgcg
     1861 ttacgtgatg caggccttcc gcctgatggc ctcgatcttc ttcgccccca aggtgcagcg
     1921 cggcgtgctg cagggcgagg tggcgcgctg cat
//
LOCUS       DATIKR010000795         1679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_35437, whole genome shotgun sequence.
ACCESSION   DATIKR010000795 DATIKR010000000
VERSION     DATIKR010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35437"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1334)
                     /locus_tag="VLL76_12545"
     CDS             complement(<1..1334)
                     /locus_tag="VLL76_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSV30383.1"
                     /translation="MTNAWRLGRTALTAVALGALAGCAQISDPRGSNEVAHALMNERD
                     SDRAMAALTRGDYPNAERFAIAALRRDPKDTYGLIVAGLVYQGTGRYDLARQYYEVII
                     TNQSPGTMMVPGESGVMMPKSVVDVARANLGVIDKITGRHVPRSAAQSGRPPGASAIG
                     TPPLPSIAPLPMRADADPLPSAPPSSMAGRPTDAETNVAGRFRILKRLLEEGLITPEE
                     YGARRNANIGALMPYSATPPAQGLERPIPRDEEFVERLKALGVALEGRALNPREHAAE
                     RTTILDNLLPAAPRKVELPALPPRDMIEAAAAIGRLERMRSAGLLSADEVKKEQDAVE
                     RVLDRRLASAQVSGSATGLRHGMPSASDGTAPWGVKLASVKSEDAAKKSWATLQRKFP
                     QQLAGLEPIYKKENVKGKGTRWTVVAGPLAEKDAATTLCKALRLHRQACDPAT"
BASE COUNT          250 a          578 c          593 g          258 t
ORIGIN      
        1 gtcgcaggat cgcaggcctg gcggtgcagg cgcagcgcct tgcacaaggt ggtggctgcg
       61 tccttctcgg ccagcgggcc ggccaccacc gtccagcggg tgcccttgcc cttcacattt
      121 tccttcttgt agatcggctc gagcccggcc aattgctgcg ggaacttgcg ctgcagcgtc
      181 gcccacgact tcttggccgc gtcctcgctc ttgaccgagg ccagcttgac gccccagggc
      241 gccgtgccgt cggaggccga cggcatgccg tggcgcaggc cggtggcgct gccggacacc
      301 tgggccgagg ccaggcggcg atcgagcacg cgttcgaccg cgtcctgctc cttcttgacc
      361 tcgtccgccg acaacagccc ggccgagcgc atgcgttcga gccggccgat ggccgcggcg
      421 gcctcgatca tgtcgcgcgg cggcagcgcc ggcagctcga ccttgcgcgg cgccgccggc
      481 aggagattgt cgaggatggt ggtgcgctcg gcggcatgct cgcgcgggtt cagggcgcgg
      541 ccttccagcg cgacgcccaa cgccttcagc cgttcgacga attcctcgtc gcgcgggatc
      601 ggacgctcca ggccctgcgc cggcggcgtc gcggaatagg gcatcagggc gccgatgttg
      661 gcgttgcgcc gggcgccgta ttcctcgggc gtgatcagcc cctcctcgag caggcgcttg
      721 aggatgcgga agcgcccggc cacgttggtc tcggcgtcgg tggggcggcc cgccatggag
      781 gacggcgggg ccgacggcag cggatcggca tcggcccgca tgggcagcgg cgcgatggac
      841 ggcagcggcg gcgtgccgat ggccgaggcg ccgggcgggc ggccggactg ggcggcactg
      901 cgcggcacat ggcggccggt gatcttgtcg atcacgccca gattggcgcg cgccacgtcg
      961 accacggatt tgggcatcat cacgccgctc tcgcccggga ccatcatggt gcccggcgac
     1021 tggttggtga tgatgacctc gtaatattgc cgcgccaggt cgtagcggcc ggtgccttga
     1081 tagaccaggc cggcgacgat caggccgtag gtgtccttgg ggtcgcgccg cagggcggcg
     1141 atggcgaagc gttcggcatt gggataatca ccacgggtca gcgcggccat ggcacggtcg
     1201 gaatcgcgct cgttcatcag cgcgtgcgcc acctcgttgg agccgcgcgg gtccgaaatc
     1261 tgggcgcatc ccgccaacgc ccccaaggcc accgccgtca gcgccgtccg gccaagacgc
     1321 caagcattcg tcatccgatc gtcccccaac ataaggcatc ccatctctac accggagcgc
     1381 gcggacggac cagccgagac tgcgacagaa tggccgcgag tgagttcaca ctttcttaat
     1441 cgcaacgccg gtttggcggc acccagccaa gcgcgtatat tataagcatc ggcaggaggg
     1501 catggtggcg ggcgagatcg agctgaagct ggcgttggaa ccatcgggcc tgcaacgcct
     1561 ggcgcggctg ccggccatcg ccagccacaa acagggacgc ggacgcgtcg cccacctgac
     1621 ctccacctat tacgacacac ccgacctgga cctggccaag gccggaatca ccgtgcggg
//
LOCUS       DATIKR010000796         1896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_120770, whole genome shotgun sequence.
ACCESSION   DATIKR010000796 DATIKR010000000
VERSION     DATIKR010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120770"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..529)
                     /locus_tag="VLL76_12550"
     CDS             complement(<1..529)
                     /locus_tag="VLL76_12550"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV30384.1"
                     /translation="MADTASLERIDSFPYRHRVNAVMGKPVVTARPGTTISEAARTMS
                     QKGISSLVVVDEAGRPAGIVTERDVLKAVANQRNEAADVPLGSVMSSPVATVRHDAFV
                     YVAMGRMGRLKLRHLVAVDEQGVAQGVVTVRGLLQLRASDALEIGDEIATAGSAADMD
                     AARRRLPRLAADLLAE"
     gene            complement(551..>1896)
                     /locus_tag="VLL76_12555"
     CDS             complement(551..>1896)
                     /locus_tag="VLL76_12555"
                     /inference="COORDINATES: protein motif:HMM:NF013122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSV30385.1"
                     /translation="RQVTIVALGLGAIVLALAVLAALPAVEGGGPAPLWLAGALLAAG
                     WLGLMVAHEMMRRHFDDLKVLQAGLEALSQGQLPPQQLTTRFKGKGGHVVERLALLIS
                     DISTRRAIEGAKPDQRMASVIAALKDGVVVVTDTGLVSLINAGAKAVLGAERAGVGTS
                     IYAALDRDGLVAALDEAKAAGRKAVTVRLKTVDGFELPARIADFGEHKGAVITFEAAE
                     AEHIHDVEVALDLHDRPPVAVAPVAATLLDELPVTVLDTETTGLDVKLDRIVSIGAVR
                     MHGQRLFRSTVIDRLVNPGKAIPQRATAVHGITTAMVAGQPPAAEILPEVLAMLQDTV
                     VVGHNIGFDLALLKRAAAEAGLDWPAPPWLDLILLAGALDPEEGDLNLDTMAERAGVN
                     ISGRHTALGDALVTAELWGRMQPVLARQGVRTLGEAIALSRQAKHIIAQQRASGW"
BASE COUNT          268 a          695 c          662 g          271 t
ORIGIN      
        1 cctcggccag caggtcggcg gccagccggg gcaggcggcg gcgggcggcg tccatgtcgg
       61 cggcggagcc ggcggtggcg atctcgtcgc cgatctccag cgcgtcggac gcgcgcaatt
      121 gcagcaggcc gcgcacggtg acgacgccct gcgccacccc ctgctcgtcc accgccacca
      181 ggtggcgcag cttcagccgc cccatgcggc ccatggccac atagacgaac gcgtcgtggc
      241 ggactgtcgc caccggactg gacatgacgc tgcccagcgg cacgtcggcg gcttcgttcc
      301 gctggttggc caccgccttg agaacgtcgc gctcggtgac gatgccggcg gggcgacccg
      361 cctcgtccac caccaccagc gagctgatgc ccttctggct catggttcga gcggcctcgg
      421 atatggtggt ccccggccgc gccgtcacca ccggcttccc catcaccgcg ttgacgcggt
      481 ggcgataggg aaaactgtcg atgcgctcca ggctcgcggt gtcggccatg tcgtccccct
      541 tccccaaaga ctaccagccg ctggcgcgct gctgggcgat gatgtgcttg gcctgccgcg
      601 acagggcgat cgcctcaccc aaggtccgca cgccctggcg cgccagcacc ggctgcatgc
      661 ggccccacaa ttcggcggtg accagggcgt cgcccagggc ggtatggcgg cccgaaatgt
      721 tgacgccggc ccgttcggcc atggtgtcga ggttgaggtc cccttcctcg gggtccagcg
      781 cgccggccag caggatcagg tccagccacg gcggggcggg ccaatccagc ccggcctcgg
      841 ccgccgcgcg cttgagcaag gcgaggtcga agccgatgtt gtggccgacc accaccgtgt
      901 cctgcagcat cgccagcacc tcgggcagta tttcggcggc gggcggctgg ccggccacca
      961 tggcggtcgt gatgccgtgc acggcggtgg cgcgctgcgg gatcgccttg ccggggttga
     1021 ccagccggtc gatgacggtg gagcggaaca gccgttgccc gtgcatgcgc acggcgccga
     1081 tcgaaacgat gcggtcaagc ttgacgtcga ggccggtggt ctcggtgtcg agcacggtga
     1141 ccggcaattc gtcgagcagg gtggcggcga ccggcgccac cgccaccggc gggcggtcgt
     1201 gcaggtcgag cgccacctcg acgtcgtgga tgtgctcggc ctcggcggcc tcgaaggtga
     1261 tgacggcgcc cttgtgctcg ccgaaatcgg cgatgcgggc gggcagctcg aagccatcca
     1321 ccgtcttgag ccgtaccgtc accgccttgc gcccggcggc cttggcttcg tccagagcag
     1381 cgaccaggcc gtcgcggtcg agcgcggcgt agatcgaggt gcccacgccg gcccgctcgg
     1441 cccccagcac cgccttggcg cccgcgttga tcaggctgac caggccggtg tcggtgacca
     1501 ccaccacgcc gtccttcaag gccgcgatca ccgacgccat ccgctggtcg ggcttggcgc
     1561 cctcgatggc gcgacgggtc gaaatatcgg aaatcaaaag agccagccgt tcgaccacgt
     1621 ggccgccctt gcccttgaag cgggtggtca gttgctgcgg cggcaattgg ccctgcgaca
     1681 gcgcttccag ccccgcctgc aacaccttga ggtcgtcgaa atggcgccgc atcatctcgt
     1741 gcgccaccat cagcccgagc cagccggccg ccagcagggc gccggcaagc cacagcggcg
     1801 ccgggccgcc gccctcgacc gccggcagcg ccgccagcac cgccaacgcc agcacgatgg
     1861 cgcccaggcc cagcgccacg atggtgacct ggcggg
//
LOCUS       DATIKR010000797         2400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_60094, whole genome shotgun sequence.
ACCESSION   DATIKR010000797 DATIKR010000000
VERSION     DATIKR010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60094"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VLL76_12560"
     CDS             complement(<1..353)
                     /locus_tag="VLL76_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013080088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV30386.1"
                     /translation="MKLLHHLKPLRQAQKRLLVPGTPDPFDIRFDAILSPTEGVLNGR
                     RVVLLGTNNYLGLTFDADCVAAAVVSLRGEGTGTTGSRIANGTYGGHRMLEDRLAAFF
                     GRRHAMVFSTGYQANL"
     gene            complement(350..610)
                     /locus_tag="VLL76_12565"
     CDS             complement(350..610)
                     /locus_tag="VLL76_12565"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSV30387.1"
                     /translation="MSSQGESVSSRVVRLVAERVPRREAVSGEAVIRELGLDSVAVMD
                     LVMAVEDEFDMVFPLDRLGDVETVADLARVVQGIIEQRTTAS"
     gene            complement(711..1625)
                     /locus_tag="VLL76_12570"
     CDS             complement(711..1625)
                     /locus_tag="VLL76_12570"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV30388.1"
                     /translation="MKRGLAAVTGGTGFLGRRVVERLTAEGWRVRQLVRTPRPGITEA
                     VEGSLTDEGALARLVEGVDLVVHMAALTKCHDAKGFRQINVGGSRNLGHAIRAHAPSA
                     KVVVVSSLAAREPTLSPYAASKAAGEVAVLDCSNARCFAVVRPCALYGPGDPATLPVF
                     RAAQLPILPFPDRPLARLALLHVDDAASAIAAACRPQARNVFWEVGAGAFSWARVFRS
                     AAAAMDRDPAMLPVPAGLLALGIKLVRAVKPGISPLTSPGKLAELLHDDWACDPARLP
                     PDALWRPGIELDAGFKATAQWYRAHGWL"
     gene            complement(1622..>2400)
                     /locus_tag="VLL76_12575"
     CDS             complement(1622..>2400)
                     /locus_tag="VLL76_12575"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV30389.1"
                     /translation="RPDVLAHFAQAFAPAGFSDKAFVPSYGLAEATLAATMVRPGTGL
                     RPEILDLDALEQDGVARPTDTGRLRAFARCGTPLPGTQLRIVDGTGRPLSEGRVGRVQ
                     VRGPSLMAGYFHEPEETARVLGPDGWLDTGDLGLLTEGELLITGRAKDLIIVNGRNLW
                     PQDLEWAAEMVPPLRPGDVAAIGHDAEGAEQVVLLVQCRLPDMAARDRLAQAVGAAVM
                     SSSGVLCRVVLVPPHALPRTSSGKLARAHARRLLVEGAFG"
BASE COUNT          383 a          876 c          833 g          308 t
ORIGIN      
        1 agattggcct gatagccggt cgagaacacc atggcgtggc ggcggccgaa gaaggccgcc
       61 agccggtctt ccagcatgcg atggccgcca taggtaccgt tggcgatgcg cgagccggtg
      121 gtgccggtgc cctcgccccg cagggacacc accgccgccg ccacgcaatc ggcgtcgaag
      181 gtgaggccga gatagttgtt ggtgcccaac aaaacgacgc gccgcccgtt cagcacgcct
      241 tcggtgggcg acaggatggc gtcgaagcgg atgtcgaacg ggtccggcgt tcccggcacc
      301 agcaagcgct tctgggcctg acgcaacggc ttgaggtggt gcagcagctt catgatgcgg
      361 tcgtccgctg ttcgatgatc ccctgaacca cgcgcgccag gtcggcgacg gtttccacgt
      421 ctcccagccg gtccagcggg aagaccatgt cgaactcgtc ctcgacggcc atgaccaggt
      481 ccatcacggc caccgaatcc aggcccagct cacggatcac ggcctcgccc gaaacggcct
      541 cgcggcgcgg cacccgctcg gcgaccaagc ggaccacacg ggacgagacg gactcgcctt
      601 ggctcgacat caactgcctc cgcgactgtt tgcagaagga tggcacgccc aacccagccg
      661 cccaaccgag cgtatgggcg atgaccgctc ccccttccgg cgcagggtgg tcatagccat
      721 ccgtgggcgc ggtaccattg ggcggtggcc ttgaagccgg catccagttc gatccccggc
      781 cgccatagcg cgtccggcgg cagacgggcc ggatcgcagg cccaatcgtc gtgcagcaat
      841 tcggccagct tgcccggcga cgtcagcggc gagatccccg gcttgaccgc ccgcaccagc
      901 ttgatgccca gcgccagcag gccggccggc acgggcagca tggcggggtc gcggtccatc
      961 gctgcggcgg ccgagcggaa cacgcgcgcc caactgaagg cgccggcgcc gacctcccag
     1021 aatacgttcc tggcctgcgg cctgcaggcg gcggcgatgg ccgaggcggc gtcgtccaca
     1081 tgcagcagcg ccagccgcgc caacggccgg tcggggaacg gcaggattgg caattgagcg
     1141 gcgcggaaca ccggcagcgt cgccgggtcg ccggggccat agagcgcgca agggcgcacc
     1201 accgcgaagc agcgcgcgtt gctgcaatcg agcaccgcga cctcgccggc cgccttgctg
     1261 gcggcatagg gcgacagcgt cggctcgcgc gccgccagcg acgacaccac caccaccttg
     1321 gccgacgggg cgtgcgcgcg gatagcatgg ccgaggttgc gcgagccgcc gacattgatc
     1381 tgccggaacc ccttggcgtc gtggcatttg gtcagcgccg ccatgtgcac caccagatcg
     1441 acaccctcga ccaggcgggc cagcgcgccc tcgtcggtca gcgagccttc gactgcctcg
     1501 gtgatgccgg ggcgcggcgt gcgcaccaat tgccgcaccc gccagccttc cgccgtcaac
     1561 cgctcgacca cacggcggcc aagaaagcct gttcccccgg tgacggcggc cagcccccgc
     1621 ttcatccgaa cgcaccctcc accagcaggc ggcgggcgtg ggcgcgggcc agcttgcccg
     1681 acgaggtgcg cggcagcgcg tgcggcggca ccagcacgac gcggcacagc acccccgacg
     1741 acgacatcac cgcggctccc accgcctggg ccaggcgatc gcgggcggcc atgtcgggca
     1801 agcggcactg caccagcagc accacctgct cggcgccctc ggcatcgtgg ccgatggcgg
     1861 cgacgtcgcc gggcctgagc ggcggcacca tctcggccgc ccattccaga tcctgaggcc
     1921 acaggttgcg gccgttgacg atgatcaggt ccttggcgcg gccggtgatt agcaattctc
     1981 cctcggtcag caggccaagg tcgccggtat ccagccagcc atcgggacca agcacgcgcg
     2041 ccgtttcttc cggctcgtgg aagtatccgg ccatgaggct ggggccgcgc acctgcaccc
     2101 gcccgacccg gccctcggac agcggccgtc cggtcccgtc gacgatgcgc aactgggtgc
     2161 ccggcagggg agtgccgcaa cgggcgaagg cgcgcaggcg gccggtgtcg gtgggccgcg
     2221 ccaccccgtc ctgctccagc gcgtcgaggt ccaggatctc gggcctgagg ccggttccgg
     2281 ggcggaccat ggtggcggcc agcgtcgcct cggccagccc gtagctgggc acgaaggcct
     2341 tgtcggagaa accggccggg gcgaaggcct gggcgaaatg ggccagcacg tcgggccgga
//
LOCUS       DATIKR010000798         4315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Omnitrophota bacterium isolate SMAG_U15723
            k141_193321, whole genome shotgun sequence.
ACCESSION   DATIKR010000798 DATIKR010000000
VERSION     DATIKR010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936436
            Sequence Read Archive: SRR9289417
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Omnitrophota bacterium (soil metagenome)
  ORGANISM  Candidatus Omnitrophota bacterium
            Bacteria; Candidatus Omnitrophota.
REFERENCE   1  (bases 1 to 4315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:14:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,508
            Genes (coding)                    :: 2,501
            CDSs (with protein)               :: 2,501
            Genes (RNA)                       :: 12
            tRNAs                             :: 12
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4315
                     /organism="Candidatus Omnitrophota bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193321"
                     /isolate="SMAG_U15723"
                     /isolation_source="soil"
                     /db_xref="taxon:2035772"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="41.6656 N 87.5497 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1817)
                     /locus_tag="VLL76_12580"
     CDS             complement(<1..1817)
                     /locus_tag="VLL76_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HSV30390.1"
                     /translation="MRGFLAGLMATATAPAALAQGLATTAADPVLAADATGMAMGMAM
                     ILPVALPLVAFQRWRIAKLTRRAAEKESEVQRLNECLAAAPDGFYAWMAGDPDRELCS
                     RRLAVLLGLVRGTESGWPDVLEGFSSADARVIDDRVAQLRAEGDAFELDFTMPGGSRR
                     VRATGVRVASAAGERLADVLWLADVTDGASAVEDLARSLQALASDTAYLKAMIDALPM
                     PVWLRDDDLSLMAVNRAYALAVDAESPDAAVAAQVELAADSAVREARALAARARAAGE
                     PRAERFHLVLAGERRLTTITEVPLSVGDNLLTAGIAMDDTRLEELQSELDHHVTAHVE
                     VLERLATAIAIYSTDTRLTFFNTAFAKLWRLEREWLATQPTYGSVMDSLRERRMLPEV
                     ADYRAYKEDELKRFIALIESQETLLHLPDGRTLRRVISPHPHGGLIFTYEDVTDTLAL
                     ERSFNTAMAVQRETLDHLHEGIAVFGGDGRLKLSNPSFARIWHLAPEDLAGEPHLHEI
                     VERLKPFFEGRPDRASTWPATRERLMALVNQRSPMEGRVERQDDAILDCTSVPLPDGA
                     MLLTFLDVTDTARVERALIERNEALAAADLLKSEFIANVS"
     gene            1978..2556
                     /locus_tag="VLL76_12585"
     CDS             1978..2556
                     /locus_tag="VLL76_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HSV30391.1"
                     /translation="MLQKTYDWMMDKAAHRHAIWWLAAISFIESSFFPIPPDVMLIPL
                     ILAAPTKWFRVAAICTLASVAGGYLGYAIGYFLMDSVGLAILRFFHAVEAFQGLKPVV
                     DKWGVWFIIAKGMTPFPYKVVTIAAGAFHFNLGEFTVASIVSRGIRFFLIAALLWKFG
                     PPIRVFVEKRLKLVTTAALVLIVAGFAMLKLL"
     gene            complement(2558..2950)
                     /locus_tag="VLL76_12590"
     CDS             complement(2558..2950)
                     /locus_tag="VLL76_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006958564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HSV30392.1"
                     /translation="MDWIWVLDSVVQAVHDAQLAEHGGGHGVRDAGLLESALARPKNT
                     AAYGSPELADLAAAYAFGICRNHPFVDGNKRTALVVMELFLDLNGVELTASDEDCVAT
                     FTALAAGELGEAELAAWVRRFSLCQPES"
     gene            complement(2956..3180)
                     /locus_tag="VLL76_12595"
     CDS             complement(2956..3180)
                     /locus_tag="VLL76_12595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007833196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HSV30393.1"
                     /translation="MFALKLTRIGNSVGFVLPKEAAERMKLEKGDTVFLVESEDGFRL
                     TPYDPEFERQVQAADRIMKKRRNALHILAK"
     gene            complement(3241..4269)
                     /gene="ftsY"
                     /locus_tag="VLL76_12600"
     CDS             complement(3241..4269)
                     /gene="ftsY"
                     /locus_tag="VLL76_12600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HSV30394.1"
                     /translation="MSKKGFFGGLFGKKSEEAPVEEVAAAPEPAPVEEAPAPQGWFTR
                     MRSGLSKSSSKLTQGLSDLFTKRKLDDEALEELEELLITADLGVATAARVTKRLAKSR
                     FGQDVSAEEIKQTLAEEIAEILEPVAEPLEIDPARKPHVVLVVGVNGSGKTTTIGKMA
                     KRYKEAGLKVSLAAGDTFRAAAVEQLKVWGDRTGCPVIARDTGADAAGLAYDAMVEAQ
                     KRGDDLLFIDTAGRLQNKSGLMEELAKVVRVIKKHDEAAPHDVLLVLDATVGQNAHSQ
                     VEVFKEMVNVTGLVLTKLDGTARGGVLVALAEKFKLPVHAIGIGEKADDLRPFEAQDF
                     ARSVVGLE"
BASE COUNT          630 a         1440 c         1501 g          744 t
ORIGIN      
        1 gagacgttgg cgatgaactc gctcttcagc aggtcggcgg cggccagggc ttcgttgcgc
       61 tcgatcaggg cgcgctcgac gcgggcggtg tcggtgacgt cgaggaaggt cagcagcatg
      121 gcgccgtcgg gcagcggcac gctggtgcag tccaggatgg cgtcgtcctg gcgttcgacc
      181 cggccctcca tggggctgcg ctggttgacc agggccatca gccgctcgcg cgtcgccggc
      241 caggtcgagg cgcggtcggg gcgtccctcg aagaacggct tcaggcgttc gacgatctcg
      301 tgcagatgcg gctcgcccgc caggtcctcg ggcgccaggt gccagatgcg ggcgaaggac
      361 gggttcgaca gcttcaggcg gccgtcgccg ccgaacaccg cgatgccttc gtgcagatgg
      421 tccagggttt cgcgctgcac cgccatggcg gtgttgaagc tgcgctccag cgccagggtg
      481 tcggtgacgt cctcgtaggt gaagatcagg ccgccatggg gatggggcga gatcacccgc
      541 cgcagggtgc ggccgtcggg cagatgcagc agggtttcct gcgattcgat cagcgcgatg
      601 aagcgcttga gttcatcttc cttgtaggcg cggtaatccg ccacctcggg cagcatgcgg
      661 cgctcgcgca gggaatccat caccgatccg taggtcggct gggtcgccag ccattcccgc
      721 tccagccgcc acagcttggc gaaggcggtg ttgaagaagg tcaggcgggt gtcggtggag
      781 tagatggcga tggcggtggc gagccgttcc agcacctcga catgggcggt gacgtggtgg
      841 tcgagctcgg attgcagctc ttccagccgg gtgtcgtcca tggcgatgcc ggcggtcagc
      901 agattgtcgc ccaccgacag cggcacttcg gtgatggtgg tcagccggcg ctcgcccgcc
      961 agcaccagat ggaagcgctc ggcacgcggc tcgccggcgg cgcgggcgcg ggcggccagg
     1021 gcacgggcct cgcgcacggc ggaatcggcg gccagttcga cctgggcggc caccgccgcg
     1081 tcggggcttt cggcatccac cgccagggca taggcgcggt tgaccgccat cagcgacaga
     1141 tcgtcgtcgc gcagccacac cggcatgggc agggcgtcga tcatggcctt gagataggcg
     1201 gtgtccgagg ccagggcctg cagcgagcgg gcgaggtcct cgaccgccga ggcgccgtcg
     1261 gtgacgtcgg ccagccacag cacgtcggcc agccgttcgc cggcggcgct ggcgacccgc
     1321 accccggtgg cgcgcacccg gcggctgccg ccgggcatgg tgaaatccag ttcgaacgcg
     1381 tcgccctcgg cgcgcaattg cgccacacgg tcgtcgatga cgcgggcgtc ggcggaggaa
     1441 aagccttcca ggacgtcggg ccagcccgat tcggtcccgc gcaccaggcc cagcagcacc
     1501 gccagccggc gcgagcacaa ttcgcggtcg gggtcgcccg ccatccaggc atagaagccg
     1561 tcgggggcgg cggccaggca ttcgttcagg cgctggacct cggattcctt ttcggcggcg
     1621 cggcgcgtca gcttggcgat gcgccagcgc tggaacgcga ccagcggcag ggcgaccggc
     1681 aggatcatgg ccatgcccat cgccatgccg gtggcgtcgg cggccagcac cggatcggct
     1741 gcggttgttg cgagcccctg ggccagcgcc gccggggcgg tcgccgtggc catcaggccc
     1801 gcgagaaacc cacgcatccg aactccttcc ccgtgatccc caaggggcag agtgccgccc
     1861 atcgcctcga aagacaaggg gaagaggtag gcgcttaggg ataggactac ccattccggt
     1921 tgtccgtcct gccccaagct gataaaccac ggccagcctt ggacccgggg aaaaccgatg
     1981 ctgcagaaga cttacgactg gatgatggac aaggccgcgc accgccatgc catctggtgg
     2041 ctggccgcga tttcgttcat cgaaagctcg ttcttcccca tcccgcccga cgtgatgctg
     2101 atcccgctga tcctggcggc gccgaccaag tggttccgcg tcgcggcgat ctgcaccctg
     2161 gcctcggtgg cgggcggcta tctcggctat gccatcggct atttcctgat ggacagcgtc
     2221 ggcctcgcca tcctgcgctt cttccacgcg gtcgaggcgt ttcagggcct caagccggtg
     2281 gtggacaagt ggggcgtgtg gttcatcatc gccaagggca tgacgccctt cccctacaag
     2341 gtcgtgacca tcgccgccgg cgccttccac ttcaatctgg gcgaattcac ggtggcgtcc
     2401 atcgtgtcgc gcggcatccg cttcttcctg atcgccgccc tgctgtggaa gttcggcccg
     2461 cccatccggg tgttcgtgga aaagcgcctg aagctggtga ccacggcggc cctggtgctg
     2521 atcgtggcgg gcttcgcgat gctgaagctg ctgtagctta gctctcgggc tgacagaggg
     2581 aaaagcggcg cacccacgcc gccagttccg cctcgccgag ttctccggct gccagggcgg
     2641 tgaaggtggc gacgcagtcc tcgtcgctgg cggtcagttc gacgccgttc aggtcgagga
     2701 acaattccat caccaccagc gcggtgcgct tgttgccatc gacgaagggg tggttgcggc
     2761 agatgccgaa ggcgtaagcg gcggcaaggt cggcgagctc gggcgagcca taggcggcgg
     2821 tgttctttgg ccgggccaga gcggattcca gcaggccggc atcccgcact ccatggccgc
     2881 caccatgctc tgccagttgg gcgtcgtgca ccgcctgcac gacgctgtcc aacacccaga
     2941 tccagtccat gacggctact tcgccaggat gtgcagggcg ttgcgccgct tcttcatgat
     3001 gcggtcggcg gcctggacct gacgctcgaa ttccggatcg tagggggtca gccggaagcc
     3061 gtcctcgctt tccaccagga agacggtgtc gcccttttcc agcttcatgc gctcggccgc
     3121 ctccttgggc aggacgaagc cgaccgagtt gccgatgcgg gtgagcttga gcgcgaacat
     3181 gaccgcctcc gtgttctaac gactgttaga atatgggcgg ccggggcgcg gcgtcaacgc
     3241 ctactccagc cccaccaccg accgcgcgaa gtcctgggcc tcgaacgggc gcaagtcgtc
     3301 ggccttttcg ccgatgccga tggcgtggac cggcagcttg aacttttcgg ccagggcaac
     3361 cagcacgccg ccgcgggcgg tgccgtccag cttggtcagg accaggccgg tgacgttgac
     3421 catttccttg aacacctcga cctgggaatg ggcgttctgg ccgacggtgg cgtccagcac
     3481 cagcagcacg tcgtgggggg cggcctcgtc gtgcttcttg atgacgcgca ccaccttggc
     3541 cagctcttcc atcaggccgg acttgttctg caggcggccg gcggtgtcga tgaacagcag
     3601 gtcgtcgccg cgcttctggg cctcgaccat ggcgtcatag gccaggccgg cggcgtcggc
     3661 gccggtgtcg cgggcgatga ccgggcagcc ggtgcggtcg ccccacacct tcaattgctc
     3721 gacggcggcg gcgcggaagg tgtcgccggc ggccaggctg accttgaggc ccgcttcctt
     3781 gtagcgcttc gccatcttgc cgatggtggt ggtcttgccc gagccgttga cgcccaccac
     3841 cagcaccaca tgcggctttc gggcggggtc gatctccagc ggctcggcga ccggctccag
     3901 gatttcggcg atctcctcgg ccagggtctg cttgatctcc tcggccgaga cgtcctggcc
     3961 gaaccggctt ttcgccagcc gcttggtgac gcgggcggcg gtggcgacgc ccaggtcggc
     4021 ggtgatcagc agttcttcca attcctccag cgcctcgtcg tcgagcttgc gcttggtgaa
     4081 caggtcgctc aatccctggg tcagtttgga cgacgacttg gacaggcccg agcgcatgcg
     4141 cgtgaaccag ccctgcggcg cgggcgcttc ctcgacgggc gcgggttcgg gcgcggcggc
     4201 aacctcctcg acgggggcct cctcgctttt cttgccgaac agcccgccga aaaatccctt
     4261 cttgctcatt ctcgtcccca ttccagtccc gtcacccccg cgcaggcggg ggtcc
//
